BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023952
(275 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/272 (75%), Positives = 240/272 (88%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
MTKVFGI + ERYFEGLP++ KTSETYTALLH YAG K KAEEL+ER+K SNLSF AL
Sbjct: 152 MTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQLGKAEELYERIKGSNLSFTAL 211
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YNEMMTLYMSVGQVEKV+LVVEE+KR+ + PDIFTYNLWISSCAA LNIDQV + LDEM
Sbjct: 212 TYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWISSCAAILNIDQVTRILDEM 271
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
DSG +DDW++Y+++ NIY+ A HLVN ESS +VEAEKSITQR+WITYDFLIILYAGL
Sbjct: 272 KHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKSITQREWITYDFLIILYAGLR 331
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+KDK+DQIWKSLRMTKQKMT+RN++CILSSY+MLGHLKE GE++DQWK+S T+DFD+SAC
Sbjct: 332 DKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLKEAGEVLDQWKKSTTTDFDLSAC 391
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+RLL AFS GLTE AN+FHMLL+++NC PTN
Sbjct: 392 SRLLDAFSGSGLTEIANDFHMLLIERNCDPTN 423
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/270 (76%), Positives = 239/270 (88%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
MTKVFG+ + ERYF+GLPL+AKT+ETYTALLH YA AK EKAEE ++R+K SNL F AL
Sbjct: 86 MTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKLIEKAEEFYKRIKGSNLPFTAL 145
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
MYNEMMTLYMSVGQ+EKV+ VVEE+K + V PDIFTYNLWISSCAA LNID+V++ LDEM
Sbjct: 146 MYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNLWISSCAAALNIDKVRRILDEM 205
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESST--LVEAEKSITQRQWITYDFLIILYAG 178
S DSG +DDW++Y+ +VNIY+TA HLVNAESST +VEAEK ITQR+WITYDFL+ILYAG
Sbjct: 206 SQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEAEKKITQREWITYDFLVILYAG 265
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
LG KDKIDQIWKSLRMT QKMTSRN++CILSSYLMLGHLKEVGEI+DQWKQS T+DFDIS
Sbjct: 266 LGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHLKEVGEIVDQWKQSTTTDFDIS 325
Query: 239 ACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
ACNRLL A S +GLTE AN FHMLL+++NC
Sbjct: 326 ACNRLLDAISCLGLTEIANNFHMLLIERNC 355
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/268 (71%), Positives = 228/268 (85%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
TKVFGI + ERYFEGLPL+ KT+ETYTALLH YAGAK T+KAEEL++R+K SNLSF+AL
Sbjct: 124 TKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIKDSNLSFDALT 183
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YNEMMTLYMSVGQ EKV VVEE+K++ V PDIFTYNLWIS CAA LNID+V++ LDEMS
Sbjct: 184 YNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAAILNIDEVRRILDEMS 243
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+G ++ W++Y+NL NIYI+ HL NA S+TLVE EK ITQRQWITYDFLIILY GLG+
Sbjct: 244 HGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQWITYDFLIILYGGLGS 303
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
KDK+DQIW SLRMTKQKM SRNYICI+SSYLMLGH KEVGE+IDQWKQS T+DFD+ AC
Sbjct: 304 KDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVIDQWKQSTTTDFDMLACK 363
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCA 269
+++ AF D+GL E AN +M+L++KN +
Sbjct: 364 KIMVAFRDMGLAEIANNLNMILIEKNLS 391
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/274 (69%), Positives = 234/274 (85%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
MT+VFGI + ERYFEGLP +AKTSETYTALLH YAGAK EKAEEL+ER+K+SN+ N L
Sbjct: 122 MTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESNVPLNIL 181
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLYMSVGQVEKV+LVVEE+KR+ VVPD+FTYNLW+SSCAATL+ID V++ L EM
Sbjct: 182 LYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVRRILKEM 241
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S +S +D WV+Y NL NIYI A HLVN+ S+++VEA + TQR WITYDFLIILYAGLG
Sbjct: 242 SNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAGTNTTQRDWITYDFLIILYAGLG 301
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NKDKIDQIWKSL+MTKQK+ SR+Y+CILSSY+MLGH+K+VG +ID+WK+S T+DFDIS
Sbjct: 302 NKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKKSTTTDFDISVF 361
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
RLL AF+++ L E+A FH LL++K+C PT+ S
Sbjct: 362 YRLLDAFAELRLIEEAETFHKLLIRKSCLPTDES 395
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/269 (70%), Positives = 230/269 (85%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
MT+VFGI + ERYFEGLPL+ KT+ETYTALLH YAGAK TEKAEEL++R+K SNLSF+AL
Sbjct: 127 MTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKDSNLSFDAL 186
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YNEMMTLYMSVGQ EKV +VVEE+K++ V PDIFTYNLWISSCAA LNID+V++ LDEM
Sbjct: 187 TYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAAILNIDEVRRILDEM 246
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S +G ++ W++Y+NL NIYI+ +HL NA S+TLVE EK ITQRQWITYDFLIILY GLG
Sbjct: 247 SHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQRQWITYDFLIILYGGLG 306
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+KDK+DQIW SL MTKQKM SRNY+CI+SSYLMLG KEVGE+IDQWKQS T+DFD+ AC
Sbjct: 307 SKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVGEVIDQWKQSTTTDFDMLAC 366
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCA 269
++L AF D+GL E AN +++L++KN +
Sbjct: 367 KKILVAFRDIGLAEIANNLNVILIEKNLS 395
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/273 (65%), Positives = 231/273 (84%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
MTKVFG+ + ERYFEGLP+ AKT ETYTALLH +AG+K T+KAE L+E++K+S++ AL
Sbjct: 134 MTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKMKESDIPLTAL 193
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NEMMTLY S+GQVEKV+ +V+++K++ V PDIFTYNLWISS AA LNID VK+ L+EM
Sbjct: 194 PFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVKQILNEM 253
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ + +++WV+Y+ LVNIY+ +++L+++ES+++VE+ I+QR+WITYD LIILYAGLG
Sbjct: 254 NHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQREWITYDLLIILYAGLG 313
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NKDKIDQIW+SLRMTKQKMTSRNYICI+S YLML LKE+GE+IDQWKQS T+DFDIS+C
Sbjct: 314 NKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTTTDFDISSC 373
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 273
NRL+ AF + GL EKAN F +L+QKNC PT A
Sbjct: 374 NRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 406
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 221/273 (80%), Gaps = 1/273 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNA 59
++KVFGI + ERYFEGL + AKT+ETYT+LLH YAG+K TE+AE LF+R+ +++ LSF A
Sbjct: 134 ISKVFGIDAAERYFEGLHIDAKTTETYTSLLHAYAGSKQTERAEALFKRIIETDSLSFGA 193
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+ YNEMMTLYMSVGQVEKV V++ +K K V PDIFTYNLW+SSCAAT NID++++ L+E
Sbjct: 194 ITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNLWLSSCAATFNIDELRRILEE 253
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M D+ ++ WV+Y+NL +IYI +S + NAES++ VEAEKSI+QR+WITYDFL+IL+ GL
Sbjct: 254 MRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAEKSISQREWITYDFLMILHTGL 313
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GNK IDQIWKSL T QK++SR+YIC+LSSYLMLGHL+E EII QWK+S T++FD SA
Sbjct: 314 GNKVMIDQIWKSLGNTNQKLSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASA 373
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
C R+L AF DVGL A+ FH+LL+ C+ N
Sbjct: 374 CLRILNAFRDVGLEGVASGFHLLLVYNKCSLEN 406
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 363 bits (931), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 169/273 (61%), Positives = 220/273 (80%), Gaps = 1/273 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNA 59
++KVFGI + ERYFEGL + +KT+ETYT+LLH YA +K TE+AE LF+R+ +S+ L+F A
Sbjct: 126 ISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGA 185
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+ YNEMMTLYMSVGQVEKV V+E +K+K V PDIFTYNLW+SSCAAT NID+++K L+E
Sbjct: 186 ITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEE 245
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M D+ ++ WV+Y++L +IYI +S + NAES+ VEAEKSI+QR+WITYDFL+IL+ GL
Sbjct: 246 MRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGL 305
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GNK IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E EII QWK+S T++FD SA
Sbjct: 306 GNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASA 365
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
C R+L AF DVGL A+ FH++L+ C+ N
Sbjct: 366 CLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 398
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 169/273 (61%), Positives = 220/273 (80%), Gaps = 1/273 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNA 59
++KVFGI + ERYFEGL + +KT+ETYT+LLH YA +K TE+AE LF+R+ +S+ L+F A
Sbjct: 133 ISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGA 192
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+ YNEMMTLYMSVGQVEKV V+E +K+K V PDIFTYNLW+SSCAAT NID+++K L+E
Sbjct: 193 ITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEE 252
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M D+ ++ WV+Y++L +IYI +S + NAES+ VEAEKSI+QR+WITYDFL+IL+ GL
Sbjct: 253 MRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGL 312
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GNK IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E EII QWK+S T++FD SA
Sbjct: 313 GNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASA 372
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
C R+L AF DVGL A+ FH++L+ C+ N
Sbjct: 373 CLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 405
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 169/273 (61%), Positives = 220/273 (80%), Gaps = 1/273 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNA 59
++KVFGI + ERYFEGL + +KT+ETYT+LLH YA +K TE+AE LF+R+ +S+ L+F A
Sbjct: 133 ISKVFGIDAAERYFEGLHIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGA 192
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+ YNEMMTLYMSVGQVEKV V+E +K+K V PDIFTYNLW+SSCAAT NID+++K L+E
Sbjct: 193 ITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEE 252
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M D+ ++ WV+Y++L +IYI +S + NAES+ VEAEKSI+QR+WITYDFL+IL+ GL
Sbjct: 253 MRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGL 312
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GNK IDQIWKSLR T Q ++SR+YIC+LSSYLMLGHL+E EII QWK+S T++FD SA
Sbjct: 313 GNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASA 372
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
C R+L AF DVGL A+ FH++L+ C+ N
Sbjct: 373 CLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 405
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 352 bits (904), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 163/224 (72%), Positives = 194/224 (86%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
MTKVFGI + ERYFE LP++AKTSETYTALLH YAGAK TEKAEEL++R+K SNLSF+AL
Sbjct: 128 MTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSNLSFDAL 187
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YNEMMTLYMSVGQVEKV VVEE+K++NV PDIFTYNLWISSCAATLNID+V++ LDEM
Sbjct: 188 TYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVRRILDEM 247
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S + ++ W +Y+NL N+Y+TAS L N+ S++L E EK ITQ QWITYDFLIILYAGLG
Sbjct: 248 SHGADSNESWTRYLNLANVYVTASRLDNSSSNSLAETEKRITQSQWITYDFLIILYAGLG 307
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 224
+KDK+DQIW SLRMTKQKM +RNY CI+S+YLMLGH+KEV ++
Sbjct: 308 SKDKLDQIWNSLRMTKQKMINRNYSCIISAYLMLGHVKEVVRLL 351
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/272 (57%), Positives = 209/272 (76%), Gaps = 1/272 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKVFG + E +FE LP AK+ E YTALLH Y +K T+KAE LFER+K +NLS +AL
Sbjct: 139 ITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDKAERLFERMKDANLSMDAL 198
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG+++KV ++ EE+KR+NV PD+FTYNL +S+ AA+++++ K LDEM
Sbjct: 199 VYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLFTYNLRVSAAAASMDLEGFKGILDEM 258
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S D + W Y NL ++Y+ AS LV + +S LVEAE I+QR+WITYDFL+IL+AGLG
Sbjct: 259 SKDPNSKEGWTLYRNLASVYVDASQLVGSGNS-LVEAEAKISQREWITYDFLVILHAGLG 317
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N+++I IWKS+ MT Q+MTSRNYIC++SSYLM G LK+ GEI+DQW++S +FDISAC
Sbjct: 318 NQERIKDIWKSMVMTSQRMTSRNYICVISSYLMCGQLKDAGEIVDQWQRSKAPEFDISAC 377
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
NRLL A GLT+ A+ F L+LQK+C T+
Sbjct: 378 NRLLDALLSAGLTDTADRFRELMLQKSCILTS 409
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/275 (56%), Positives = 208/275 (75%), Gaps = 1/275 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKVFG ++ E +FE LP AK+ E YTALLH YA +K T+KAE LFER+K ++LS + L
Sbjct: 146 ITKVFGANAAEDFFEKLPSEAKSLEAYTALLHSYARSKMTDKAERLFERMKDADLSIDVL 205
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG+++KV V EE+KR+NV PD+FTYNL IS+ AA+++++ K LDEM
Sbjct: 206 VYNEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYNLRISASAASMDLEIFKGILDEM 265
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S D ++ W Y NL IY+ AS LV++ +S LVEAE I+QR+WITYDFLI+L+ GLG
Sbjct: 266 SKDPNSNEGWTLYRNLATIYVNASQLVSSGNS-LVEAEAKISQREWITYDFLILLHTGLG 324
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N +++ IWKS++MT Q+MTSRNYIC+LSSYLM G LK+ EI+DQW++S +FDISAC
Sbjct: 325 NLERVKDIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKDAKEIVDQWQRSKAPEFDISAC 384
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNASG 275
NRL A G T+ A+ F L+LQK+C T+ +G
Sbjct: 385 NRLFDALLGAGFTDTADSFRELMLQKSCILTSMAG 419
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 329 bits (843), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 152/268 (56%), Positives = 203/268 (75%), Gaps = 1/268 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+T+VFG ++ E +FE LP ++ E YTALLH YA +K T+KAE LF+R+K +NLS N L
Sbjct: 154 ITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNIL 213
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG+++KV ++ EE+KR+ PD+FTYNL IS+ AA+++++ K LDEM
Sbjct: 214 VYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEM 273
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S D ++ W Y NL IY+ A LV + +S LVEAE I+QR+WITYDFL+IL+ GLG
Sbjct: 274 SKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNS-LVEAEAKISQREWITYDFLVILHTGLG 332
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N+D+I IWKS+ MT Q+MTSRNYIC+LSSYLM G LK+ GE+IDQW++S +FDISAC
Sbjct: 333 NRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISAC 392
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNC 268
NRL AF + G T+ AN F L+LQK+C
Sbjct: 393 NRLFDAFLNAGFTDTANSFRELMLQKSC 420
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 203/268 (75%), Gaps = 1/268 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+T+VFG ++ E +FE LP ++ E YTALLH YA +K T+KAE LF+R+K +NLS N L
Sbjct: 195 ITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNIL 254
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG+++KV ++ EE+KR+ PD+FTYNL IS+ AA+++++ K LDEM
Sbjct: 255 VYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEM 314
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S D ++ W Y NL IY+ A LV + +S LVEAE I++R+WITYDFL+IL+ GLG
Sbjct: 315 SKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNS-LVEAEAKISRREWITYDFLVILHTGLG 373
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N+D+I IWKS+ MT Q+MTSRNYIC+LSSYLM G LK+ GE+IDQW++S +FDISAC
Sbjct: 374 NRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISAC 433
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNC 268
NRL AF + G T+ AN F L+LQK+C
Sbjct: 434 NRLFDAFLNAGFTDTANSFRELMLQKSC 461
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 203/268 (75%), Gaps = 1/268 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+T+VFG ++ E +FE LP ++ E YTALLH YA +K T+KAE LF+R+K +NLS N L
Sbjct: 154 ITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNIL 213
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG+++KV ++ EE+KR+ PD+FTYNL IS+ AA+++++ K LDEM
Sbjct: 214 VYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEM 273
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S D ++ W Y NL IY+ A LV + +S LVEAE I++R+WITYDFL+IL+ GLG
Sbjct: 274 SKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNS-LVEAEAKISRREWITYDFLVILHTGLG 332
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N+D+I IWKS+ MT Q+MTSRNYIC+LSSYLM G LK+ GE+IDQW++S +FDISAC
Sbjct: 333 NRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISAC 392
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNC 268
NRL AF + G T+ AN F L+LQK+C
Sbjct: 393 NRLFDAFLNAGFTDTANSFRELMLQKSC 420
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 205/272 (75%), Gaps = 1/272 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+T+VFG ++ E +FE LP ++ E YTALLH YA +K T+KAE LF+R+K +NLS N L
Sbjct: 16 ITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNIL 75
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG+++KV ++ EE+KR+ PD+FTYNL IS+ AA+++++ K LDEM
Sbjct: 76 VYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEM 135
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S D ++ W Y NL IY+ A LV + +S LVEAE I++R+WITYDFL+IL+ GLG
Sbjct: 136 SKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNS-LVEAEAKISRREWITYDFLVILHTGLG 194
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N+D+I IWKS+ MT Q+MTSRNYIC+LSSYLM G LK+ GE+IDQW++S +FDISAC
Sbjct: 195 NRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISAC 254
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
NRL AF + G T+ AN F L+LQK+C T+
Sbjct: 255 NRLFDAFLNAGFTDTANSFRELMLQKSCILTS 286
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 322 bits (826), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 145/268 (54%), Positives = 205/268 (76%), Gaps = 1/268 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKVFG ++ E +FE LP +AK+ E YTALLH YA +K +KAE LF+R+K ++L + L
Sbjct: 143 ITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPIDVL 202
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG+++KV ++ EE+KR+NV PD+FTYNL IS+ A+++++ K LDEM
Sbjct: 203 VYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGILDEM 262
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S D ++ W+ Y NL +IY+ AS LV++ +S LVEAE I+QR+WITYD L+IL+AGLG
Sbjct: 263 SKDPNSNEGWMLYRNLASIYVDASQLVSSGNS-LVEAEAKISQREWITYDLLVILHAGLG 321
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N D++ IWKS++MT Q+MTSRNY+C+LS+YLM G LK+ E++DQW++S +FD+SAC
Sbjct: 322 NLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAEVVDQWQRSKVPEFDVSAC 381
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNC 268
NRL A G T+ A+ F L+LQK+C
Sbjct: 382 NRLFDALLAAGFTDTADSFRELMLQKSC 409
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 144/268 (53%), Positives = 204/268 (76%), Gaps = 1/268 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKVFG ++ E +FE LP +AK+ E YTALLH YA +K +KAE LF+R+K ++L + L
Sbjct: 143 ITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPIDVL 202
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG+++KV ++ EE+KR+NV PD+FTYNL IS+ A+++++ K LDEM
Sbjct: 203 VYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGILDEM 262
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S D ++ W+ Y NL +IY+ AS LV++ +S LVEAE I+QR+WITYD L+IL+AGLG
Sbjct: 263 SKDPNSNEGWMLYRNLASIYVDASQLVSSGNS-LVEAEAKISQREWITYDLLVILHAGLG 321
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N D++ IWKS++MT Q+MTSRNY+C+LS+YLM G LK+ ++DQW++S +FD+SAC
Sbjct: 322 NLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKDAAGVVDQWQRSKVPEFDVSAC 381
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNC 268
NRL A G T+ A+ F L+LQK+C
Sbjct: 382 NRLFDALLAAGFTDTADSFRELMLQKSC 409
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/284 (50%), Positives = 199/284 (70%), Gaps = 10/284 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKVFG + E +FE LP AK+ E YTALLH Y +K T++AE LFER+K ++L +AL
Sbjct: 132 ITKVFGASAAEDFFEKLPAGAKSLEAYTALLHSYGRSKMTDRAERLFERMKGASLPMDAL 191
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG++ KV V EE+KR+NV PD+FTYNL S+ AA+++++ + LDEM
Sbjct: 192 VYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVLDEM 251
Query: 121 SCD--SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYA 177
S D S W Y +L ++Y+ A L+ + +S VEA E I+QR+WITYDFL+IL+A
Sbjct: 252 SRDLKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARISQREWITYDFLVILHA 311
Query: 178 GLGNKDKIDQIWKSLRMT-------KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
GLG ++I IW+S+ T +Q+MTSRNY+C++SSYL G L++ GE++DQW++S
Sbjct: 312 GLGRPERIRDIWRSMVATSQSQSQSQQRMTSRNYVCVVSSYLACGRLEDAGEVVDQWQRS 371
Query: 231 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+FD+SACNRLL A GL + A F L+LQK C T++S
Sbjct: 372 KAPEFDVSACNRLLDALLRAGLADAAGRFRELMLQKRCILTSSS 415
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/278 (50%), Positives = 196/278 (70%), Gaps = 10/278 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKVFG + E +FE LP AK+ E YTALLH Y +K T++AE LFER+K ++L +AL
Sbjct: 132 ITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDRAERLFERMKDASLPMDAL 191
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLY+SVG++ KV V EE+KR+NV PD+FTYNL S+ AA+++++ + LDEM
Sbjct: 192 VYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVLDEM 251
Query: 121 SCDSGGSDD--WVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYA 177
S D S + W Y +L ++Y+ A L+ + +S VEA E I+QR+WITYDFL+IL+A
Sbjct: 252 SRDPKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARISQREWITYDFLVILHA 311
Query: 178 GLGNKDKIDQIWKSLRMT-------KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
GLG ++I IW+S+ T +Q+MTSRNY+C++SSYL G L++ GE++DQW++S
Sbjct: 312 GLGRPERIRDIWRSMVATSQSQSQQQQRMTSRNYVCVVSSYLACGRLEDAGEVVDQWQRS 371
Query: 231 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
+FD+SACNRLL A GL + A F L+LQK C
Sbjct: 372 KAPEFDVSACNRLLDALLRAGLADAAGRFRELMLQKRC 409
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/145 (71%), Positives = 124/145 (85%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
MT+VFGI + ERYFEGLP +AKTSETYTALLH YAGAK EKAEEL+ER+K+SN+ N L
Sbjct: 129 MTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESNVPLNIL 188
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YNEMMTLYMSVGQVEKV+LVVEE+KR+ VVPD+FTYNLW+SSCAATL+ID V++ L EM
Sbjct: 189 LYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVRRILKEM 248
Query: 121 SCDSGGSDDWVKYVNLVNIYITASH 145
S +S +D WV+Y NL NIYI A +
Sbjct: 249 SNNSSANDGWVRYRNLANIYIMADY 273
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 155/259 (59%), Gaps = 2/259 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI +GE YF LP ++KT TY +LL+ Y TEKAE L ++K+ N++ +++
Sbjct: 100 VAKARGITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSM 159
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY GQ EKV +++E+K +NV+PD +TYN+W+ + AAT +I V++ ++EM
Sbjct: 160 SYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEM 219
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ D + DW Y N+ +IY+ A AE + L E E TQR + Y FLI LY LG
Sbjct: 220 NRDGRVAPDWTTYSNMASIYVDAGLSQKAEKA-LQELEMKNTQRDFTAYQFLITLYGRLG 278
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++ +IW+SLR+ K ++ Y+ ++ + L L + +W Q+ S +DI
Sbjct: 279 KLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPGAETLFKEW-QANCSTYDIRIV 337
Query: 241 NRLLGAFSDVGLTEKANEF 259
N L+GA++ GL EKA E
Sbjct: 338 NVLIGAYAKEGLIEKAKEL 356
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 155/259 (59%), Gaps = 2/259 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K I +GE YF LP ++KT TY +LL+ Y TEKAE L ++K+ N++ +++
Sbjct: 100 VAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSM 159
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY G+ EKV +++E+K +NV+PD +TYN+W+ + AAT +I V++ ++EM
Sbjct: 160 SYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEM 219
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ D + DW Y N+ +IY+ A AE + L E E TQR + Y FLI LY LG
Sbjct: 220 NRDGRVAPDWTTYSNMASIYVDAGLSQKAEKA-LQELEMKNTQRDFTAYQFLITLYGRLG 278
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++ +IW+SLR+ K ++ Y+ ++ + L L + +W Q+ S +DI
Sbjct: 279 KLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEW-QANCSTYDIRIV 337
Query: 241 NRLLGAFSDVGLTEKANEF 259
N L+GA++ GL +KANE
Sbjct: 338 NVLIGAYAQEGLIQKANEL 356
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 153/270 (56%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TK G+ + E YF LP ++K TY ALL+ Y TEKAE L ER+K+ L +++
Sbjct: 99 ITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSM 158
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY +GQ EK+ +++E+K +++PD +TYN+W+ + AA +I V++ ++EM
Sbjct: 159 PYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEM 218
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + DW Y NL +IY+ A AE + L E EK R + FLI LY +G
Sbjct: 219 KRDGRVASDWTTYSNLASIYVDAGVFEKAEKA-LKELEKRNACRDLTAFQFLITLYGRIG 277
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ ++W+SLR+ K + +Y+ ++ + L L + +W +S S +DI
Sbjct: 278 NLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREW-ESGCSIYDIRVA 336
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+GA++ GL EKA E ++ P
Sbjct: 337 NALIGAYAKDGLLEKAEELKEHARRRGAKP 366
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 153/270 (56%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TK G+ + E YF LP ++K TY ALL+ Y TEKAE L ER+K+ L +++
Sbjct: 99 ITKTRGVAAAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSM 158
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY +GQ EK+ +++E+K +++PD +TYN+W+ + AA +I V++ ++EM
Sbjct: 159 PYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDISGVERVIEEM 218
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + DW Y NL +IY+ A AE + L E EK R + FLI LY +G
Sbjct: 219 KRDGRVASDWTTYSNLASIYVDAGVFEKAEKA-LKELEKRNACRDLTAFQFLITLYGRIG 277
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ ++W+SLR+ K + +Y+ ++ + L L + +W +S S +DI
Sbjct: 278 NLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREW-ESGCSIYDIRVA 336
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+GA++ GL EKA E ++ P
Sbjct: 337 NALIGAYAKDGLLEKAEELKEHARRRGAKP 366
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 159/270 (58%), Gaps = 4/270 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKV G++S E++FE LP + +T +ALLH Y +KAE L ++ + +L N L
Sbjct: 123 ITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSECDLLINPL 182
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M++LY+S G++EKV +++E+K N PDI T+NLW+++CA+ +++ ++ L E+
Sbjct: 183 PYNHMISLYISNGKLEKVPKIIQELK-MNTSPDIVTFNLWLAACASQNDVETAERVLLEL 241
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ DWV Y L N+YI + L A +T+ E E +++ + Y L+ L+ +G
Sbjct: 242 K-KAKIDPDWVTYSTLTNLYIKNASLEKA-GATVKEMENRTSRKTRVAYSSLLSLHTNMG 299
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NKD +++IW+ ++ + +KM YIC++SS L LG ++ +W +S + D+
Sbjct: 300 NKDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAGAEDLYREW-ESVSGTNDVRVS 358
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLG++ + E A +F ++QK P
Sbjct: 359 NILLGSYINQDQMEMAEDFCNQIVQKGVIP 388
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 152/270 (56%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E +F LP ++K TY ALL+ Y TE+AE L E++K+ NL +++
Sbjct: 100 VAKTRGIPAAEIFFIDLPETSKNHLTYGALLNCYCNQLMTEEAEALMEKMKELNLGLSSM 159
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY +GQ E++ +++E+K +++PD +TYN+W+ + AA +I ++ ++EM
Sbjct: 160 SYNSLMTLYTKIGQPERIPGIIQEMKSDSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 219
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + DW Y NL +IY+ A AE TL E EK R + FLI LY +G
Sbjct: 220 KRDGRVAADWTTYSNLASIYVDAQLFEKAE-KTLKELEKRNVHRDHSAFQFLITLYGRIG 278
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ +IW+SLR+ K ++ +Y+ ++ + L L + +W +S S +DI
Sbjct: 279 NLHELYRIWRSLRLAFPKTSNISYLNMIQVLVNLKDLPGAEKCFREW-ESNCSGYDIRVA 337
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+ A++ GL EKA E + + P
Sbjct: 338 NVLIKAYAKKGLLEKAEELKERAIGRGAKP 367
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 153/270 (56%), Gaps = 3/270 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E YF LP S+K +Y++LL+ Y TEKAE LFE++K+ NL +
Sbjct: 102 VAKARGIDAAENYFVSLPESSKNHLSYSSLLNCYCKELLTEKAEALFEKIKELNLPVTPV 161
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY +G+ +KV +++E+K NV D +TY +W+ + AA +I V++ +DEM
Sbjct: 162 PYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYIVWMRALAALNDISGVERVIDEM 221
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D G DW Y NL +IY+ A+ A + L + EK T+R I + FLI LY +G
Sbjct: 222 KRD-GVKGDWTTYSNLASIYVNANMFEKA-AKALKDLEKINTRRDLIGFQFLITLYGQIG 279
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+ ++ ++W+SLR+ + + +Y+ ++ + L L + +W +S + +DI
Sbjct: 280 DLTEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPGAEKCFKEW-ESGSPTYDIRIP 338
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+GA++ GL EKA L++ P
Sbjct: 339 NALIGAYTKGGLLEKAMALKERALRRGARP 368
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 153/274 (55%), Gaps = 2/274 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E YF LP ++K TY ALL+ Y TE+AE L E++K+ NL +++
Sbjct: 100 VAKTRGIPAAENYFIDLPETSKNLRTYGALLNCYCKELMTEEAEALIEKMKELNLGLSSM 159
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY VGQ E++ +++E+K NV+PD +TYN+W+ + AA +I V++ ++EM
Sbjct: 160 SYNSLMTLYTKVGQPERIPAIIQEMKADNVMPDSYTYNVWMRALAAVNDISGVERVIEEM 219
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + +W Y NL +IY+ A + AE + L E EK + + FLI LY G
Sbjct: 220 KRDGRVAANWTTYSNLASIYVDAGYFDKAEKA-LKELEKINANKDLFAFQFLITLYGRTG 278
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++ +IW+SLR+ K + +Y+ ++ + L + + +W +S S +DI
Sbjct: 279 KLIEVYRIWRSLRLAFPKTANISYLNMIQVLVNLKDVPGAEKCFREW-ESGCSTYDIRVA 337
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N ++ A++ GL +KA E ++ P + +
Sbjct: 338 NVVISAYAKEGLVDKAEELKERARRRGAKPNSKT 371
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 153/271 (56%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G+ S E++FE L K T TALLH Y K +EKAE L E++ + L
Sbjct: 247 IAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPL 306
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M++LY+S GQ+EKV +++E+K KN PD+ TYNLW++ CA+ +++ +K L E+
Sbjct: 307 PYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEI 365
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ DWV Y +L N+YI L++ ++TL E EK +++ I Y LI L+ +
Sbjct: 366 K-KAKIDPDWVTYSSLTNLYIKKG-LLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQ 423
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+KD + +IWK L+ KM Y C++SS + LG +E + +W S + D
Sbjct: 424 DKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEW-TSVSPTGDSRVP 482
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N LL A+ + E A +F+ ++++ P+
Sbjct: 483 NILLAAYINKNEMEMAEKFYNQMVERGITPS 513
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 150/274 (54%), Gaps = 6/274 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV GI S E+Y+ L K TY ALL+ Y K EK+E + E +K A
Sbjct: 170 IAKVHGIASAEKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKSEAIMEELKDLGFIKTAF 229
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
Y EMMTLYM+ Q EKV LV++E+K+K + DI YN+W+ S AA ++DQV + +E+
Sbjct: 230 PYTEMMTLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRSYAALSDMDQVAEVFNEI 289
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI----TQRQWITYDFLIILY 176
D + DW Y L NIYI A L A S L E E + T++ + Y+ LI L+
Sbjct: 290 ERDDNINTDWSIYSTLANIYINAKVLDKA-GSALKEMENKMKEIETKKDQLAYNHLISLH 348
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
LGNKD++ +IW+S + KMT+R+Y+C+LSS + +G ++ I +W+ T D D
Sbjct: 349 GRLGNKDEVYRIWQSFELAFPKMTNRSYVCLLSSLVGMGDIEGAEVFIKKWESMKTFD-D 407
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
LL A+ + G +KA ++ K P
Sbjct: 408 SRIYYALLNAYIEKGWLQKAELLLERVVDKGGKP 441
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 153/271 (56%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G+ S E++FE L K T TALLH Y K +EKAE L E++ + L
Sbjct: 134 IAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPL 193
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M++LY+S GQ+EKV +++E+K KN PD+ TYNLW++ CA+ +++ +K L E+
Sbjct: 194 PYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEI 252
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ DWV Y +L N+YI L++ ++TL E EK +++ I Y LI L+ +
Sbjct: 253 K-KAKIDPDWVTYSSLTNLYIKKG-LLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQ 310
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+KD + +IWK L+ KM Y C++SS + LG +E + +W S + D
Sbjct: 311 DKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEW-TSVSPTGDSRVP 369
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N LL A+ + E A +F+ ++++ P+
Sbjct: 370 NILLAAYINKNEMEMAEKFYNQMVERGITPS 400
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 153/271 (56%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G+ S E++FE L K T TALLH Y K +EKAE L E++ + L
Sbjct: 134 IAKIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPL 193
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M++LY+S GQ+EKV +++E+K KN PD+ TYNLW++ CA+ +++ +K L E+
Sbjct: 194 PYNHMISLYISDGQLEKVPGMIQELK-KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEI 252
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ DWV Y +L N+YI L++ ++TL E EK +++ I Y LI L+ +
Sbjct: 253 K-KAKIDPDWVTYSSLTNLYIKKG-LLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQ 310
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+KD + +IWK L+ KM Y C++SS + LG +E + +W S + D
Sbjct: 311 DKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEW-TSVSPTGDSRVP 369
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N LL A+ + E A +F+ ++++ P+
Sbjct: 370 NILLAAYINKNEMEMAEKFYNQMVERGITPS 400
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 147/268 (54%), Gaps = 2/268 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K G+ + E YF LP S+K E Y ALL++Y +KAE L E++K+ L A+ Y
Sbjct: 32 KTHGVAAAENYFIDLPESSKNIECYGALLNIYCKELIPDKAEALMEKMKELGLPITAMSY 91
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +MTLY G EKV +V+E+K +++ +TYN+W+ + AA +I V++ LDEM
Sbjct: 92 NSLMTLYSKTGLPEKVPALVQEMKASDIMLQTYTYNVWMRALAAVKDIYGVERVLDEMKR 151
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
D ++DW Y NL +IY+ + AE++ L E EK T + Y FL+ LY GN
Sbjct: 152 DGRVAEDWTTYSNLASIYVESKMFEKAENA-LKELEKRNTSQDLSPYQFLLTLYGKTGNL 210
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W+SLR+ K + Y+ ++ + L LK + W+ S T ++DI N
Sbjct: 211 IEVYRVWRSLRLAFPKTPNVAYLNMIQRLVTLKDLKGAEKCFADWESSCT-NYDIRIANV 269
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAP 270
L+GA+ GL ++A E ++ P
Sbjct: 270 LMGAYIKDGLLQQAKELKKRACKRGAKP 297
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 147/268 (54%), Gaps = 2/268 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K G+ + E YF LP S+K E Y ALL++Y +KAE L E++K+ L A+ Y
Sbjct: 32 KTHGVAAAENYFIDLPESSKNIECYGALLNIYCKELIPDKAEALMEKMKELGLPITAMSY 91
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +MTLY G EKV +V+E+K +++ +TYN+W+ + AA +I V++ LDEM
Sbjct: 92 NSLMTLYSKTGLPEKVPALVQEMKASDIMLQTYTYNVWMRALAAVKDIYGVERVLDEMKR 151
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
D ++DW Y NL +IY+ + AE++ L E EK T R+ Y FL+ LY GN
Sbjct: 152 DGRVAEDWTTYSNLASIYVESKMFDKAENA-LKELEKRNTSRELSPYQFLLTLYGKTGNL 210
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W+SLR+ K + Y+ ++ + L LK + W+ S T ++DI N
Sbjct: 211 IEVYRLWRSLRLAFPKTPNVAYLNMIQRLVTLKDLKGAEKCFADWESSCT-NYDIRIANV 269
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAP 270
L+GA+ G ++A E ++ P
Sbjct: 270 LMGAYIKDGSLQQAKELKKRACKRGAKP 297
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 154/271 (56%), Gaps = 6/271 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G++S E++FE +P + + +ALLH+Y K KAE L E++ + NAL
Sbjct: 118 IAKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLKNAL 177
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+++Y++ GQ+EKVA +++E+K+K PD+ TYN+W+++CA+ +++ +K E+
Sbjct: 178 PYNHMLSVYVANGQLEKVAEIIQELKKK-TSPDVVTYNMWLTACASQNDVETAEKVFMEL 236
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S DWV Y L N+YI L A + TL E EK +++ +TY L+ L+A +
Sbjct: 237 K-KSKLDPDWVTYSTLTNLYIKKECLEKA-AYTLKEVEKRASKKNRVTYSSLLSLHANMK 294
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ-SATSDFDISA 239
+KD + + W ++ KM Y C++SS + LG + ++W+ SAT D +S
Sbjct: 295 DKDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAENLYNEWESVSATRDSRVS- 353
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N +L ++ + E A F ++QK P
Sbjct: 354 -NIVLASYINRNQMEDAENFCQRMVQKGITP 383
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 141/268 (52%), Gaps = 2/268 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K G+ E YF LP A + LLH Y + TEKAE +++ S L N +Y
Sbjct: 140 KAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLY 199
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
NEMM LY++ Q EKV LV++++K+ + ++ +YNLW+++C+ + ++ +EM
Sbjct: 200 NEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSELYGVGSIELVFEEMLT 259
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
D W L N+YI LV + L EAEK ++ + + Y FLI LYA L +K
Sbjct: 260 DKNVQVGWSTMCTLANVYIQEG-LVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDK 318
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
+ + ++W++ + T NYICIL + LG + + ++ +W+ + ++DI N
Sbjct: 319 EGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNC-RNYDIRVSNV 377
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAP 270
LLGA+ GL EKA H L + P
Sbjct: 378 LLGAYVRNGLLEKAESLHRHTLGRGGNP 405
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 150/274 (54%), Gaps = 4/274 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E++FE +P AK T ALLH Y +KAE + E + ++ AL
Sbjct: 121 VAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCAL 180
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MM+LYMS G++EKV +++E+ R+ +PD+ TYN+W++ C+ ++ +K D M
Sbjct: 181 PFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLTYCSKKNSVKAAEKVYDLM 239
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D DW+ + L +IYI A V + LVE EK ++++ Y L+ LYA L
Sbjct: 240 K-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKRASRKERAAYSSLLTLYASLS 297
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++ +D++W+ +R T +K + Y C+L+S G + E +W +SA+ D
Sbjct: 298 DRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEW-ESASGTRDSRIP 356
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N +L + G+ EKA F ++QK P+ ++
Sbjct: 357 NTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYST 390
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 148/271 (54%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E++FE +P AK T ALLH Y +KAE + E + ++ AL
Sbjct: 51 VAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCAL 110
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MM+LYMS G++EKV +++E+ R+ +PD+ TYN+W++ C+ ++ +K D M
Sbjct: 111 PFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLTYCSKKNSVKAAEKVYDLM 169
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D DW+ + L +IYI A V + LVE EK ++++ Y L+ LYA L
Sbjct: 170 K-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKRASRKERAAYSSLLTLYASLS 227
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++ +D++W+ +R T +K + Y C+L+S G + E +W +SA+ D
Sbjct: 228 DRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEW-ESASGTRDSRIP 286
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N +L + G+ EKA F ++QK P+
Sbjct: 287 NTILAFYIKNGMMEKAEGFLDHIVQKGVKPS 317
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 4/269 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K G+ E YF LP A + LLH Y + TEKAE +++ S L N +Y
Sbjct: 140 KAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDSGLVVNHHLY 199
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVP-DIFTYNLWISSCAATLNIDQVKKFLDEMS 121
NEMM LY++ Q EKV LV++++K +N++P ++ +YNLW+++C+ + ++ +EM
Sbjct: 200 NEMMKLYVATYQNEKVPLVIKDMK-QNLIPRNVLSYNLWMNACSELYGVGSIELVFEEML 258
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
D W L N+YI LV + L EAEK ++ + + Y FLI LYA L +
Sbjct: 259 TDKNVQVGWSTMCTLANVYIQEG-LVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKD 317
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K+ + ++W++ + T NYICIL + LG + + ++ +W+ + ++DI N
Sbjct: 318 KEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDKAEKVFKEWELNC-RNYDIRVSN 376
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
LLGA+ GL EKA H L + P
Sbjct: 377 VLLGAYVRNGLLEKAESLHRHTLGRGGNP 405
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 151/269 (56%), Gaps = 6/269 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKV G++S E++FE LP + T TALLH Y T KAE L ++ + + +
Sbjct: 115 ITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTNKAEALMSKMSECGFLRSPV 174
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN MM+LY+S G++EKV + EE+K N PD+ T+NL +++CA+ +++ ++ L ++
Sbjct: 175 PYNRMMSLYISNGKLEKVPKLFEELK-VNTSPDVVTFNLLLTACASENDVETAERVLLQL 233
Query: 121 SCDSGGSDDWVKYVNLVNIYI---TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
+ DWV Y L N+YI + + +STL E EK ++ + Y L+ L+A
Sbjct: 234 K-KAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYSSLLSLHA 292
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
+GN D++++IW ++ KM+ Y+C++SS + LG V + +W +S + D+
Sbjct: 293 NMGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLVKLGDFAGVENLYKEW-ESVSGTNDV 351
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQK 266
N LL ++ D G E A F L++K
Sbjct: 352 RVSNLLLTSYVDQGQMEMAEIFCNQLVEK 380
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 148/270 (54%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E YFE LP K TY +LL++YA A+ EK E FE++++ + + L
Sbjct: 146 IAKVRGVPDAEEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTL 205
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M Y+ V + EKV+ V +E+K++N+ D+ TYN+WI CAA + D +++ L++M
Sbjct: 206 PFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQM 265
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ D +W Y L +++I + AE L EAEK T R + FLI LY+ L
Sbjct: 266 TADESVVANWTTYTTLASMHIKLENFEKAEEC-LKEAEKRATGRDKKCFHFLITLYSHLQ 324
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ +IW + T + + + Y +LS+ + LG ++ + ++W S +S FD
Sbjct: 325 KKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTM 383
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL +S G KA + ++K P
Sbjct: 384 NILLAWYSREGFVVKAQQTLNRFVEKGGNP 413
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 145/266 (54%), Gaps = 4/266 (1%)
Query: 6 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
G+ S E++FE +P AK T ALLH Y +KAE + E + ++ AL +N M
Sbjct: 103 GLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCALPFNHM 162
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
M+LYMS G++EKV +++E+ R+ +PD+ TYN+W++ C+ ++ +K D M D
Sbjct: 163 MSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLTYCSKKNSVKAAEKVYDLMK-DER 220
Query: 126 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
DW+ + L +IYI A V + LVE EK ++++ Y L+ LYA L ++ +
Sbjct: 221 VVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKRASRKERAAYSSLLTLYASLSDRGNL 279
Query: 186 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 245
D++W+ +R T +K + Y C+L+S G + E +W +SA+ D N +L
Sbjct: 280 DRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEW-ESASGTRDSRIPNTILA 338
Query: 246 AFSDVGLTEKANEFHMLLLQKNCAPT 271
+ G+ EKA F ++QK P+
Sbjct: 339 FYIKNGMMEKAEGFLDHIVQKGVKPS 364
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 131/228 (57%), Gaps = 1/228 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L E++K+ N +F A+
Sbjct: 186 IAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFTAM 245
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +MT+Y V Q EKV +++++K +V+PD+FTYN+W+ + AA +I V++ ++EM
Sbjct: 246 SFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIEEM 305
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + DW Y NL +IY+ A AE++ L E EK T Y FLI LY
Sbjct: 306 KRDGRVAPDWTTYSNLASIYVEAGMFEKAEAA-LKELEKRNTSNDIEAYQFLITLYGRTQ 364
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
N ++ ++W+SL+ +M + +Y+ ++ L L +W+
Sbjct: 365 NLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWE 412
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 131/228 (57%), Gaps = 1/228 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L E++K+ N +F A+
Sbjct: 156 IAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFTAM 215
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +MT+Y V Q EKV +++++K +V+PD+FTYN+W+ + AA +I V++ ++EM
Sbjct: 216 SFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIEEM 275
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + DW Y NL +IY+ A AE++ L E EK T Y FLI LY
Sbjct: 276 KRDGRVAPDWTTYSNLASIYVEAGMFEKAEAA-LKELEKRNTSNDIEAYQFLITLYGRTQ 334
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
N ++ ++W+SL+ +M + +Y+ ++ L L +W+
Sbjct: 335 NLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWE 382
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 131/228 (57%), Gaps = 1/228 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L E++K+ N +F A+
Sbjct: 96 IAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFTAM 155
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +MT+Y V Q EKV +++++K +V+PD+FTYN+W+ + AA +I V++ ++EM
Sbjct: 156 SFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIEEM 215
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + DW Y NL +IY+ A AE++ L E EK T Y FLI LY
Sbjct: 216 KRDGRVAPDWTTYSNLASIYVEAGMFEKAEAA-LKELEKRNTSNDIEAYQFLITLYGRTQ 274
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
N ++ ++W+SL+ +M + +Y+ ++ L L +W+
Sbjct: 275 NLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWE 322
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 148/270 (54%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E YFE LP K TY +LL++YA A+ EK E FE++++ + + L
Sbjct: 146 IAKVRGVPDTEEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFATDTL 205
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M Y+ V + EKV+ V +E+K++N+ D+ TYN+WI CAA + D +++ L++M
Sbjct: 206 PFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQM 265
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ D +W Y L +++I + AE L EAEK T R + FLI LY+ L
Sbjct: 266 TADESVVANWTTYTTLASMHIKLENFEKAEEC-LKEAEKRATGRDKKCFHFLITLYSHLQ 324
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ +IW + T + + + Y +LS+ + LG ++ + ++W S +S FD
Sbjct: 325 KKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTM 383
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL +S G KA + ++K P
Sbjct: 384 NILLAWYSREGFVVKAQQTLNRFVEKGGNP 413
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 128/228 (56%), Gaps = 1/228 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L E++K+ N +F A+
Sbjct: 96 VAKSRGIAAAEKYFMDLPETSKTHLTYGALLNCYCKESMTEKAEALMEKMKELNFAFTAM 155
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY V Q EKV +++++K +V+PD++TYN+W+ S AA +I V++ ++EM
Sbjct: 156 SYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPDVYTYNVWMRSLAARQDISGVERVIEEM 215
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D DW Y NL +IY+ A AE++ L E EK T Y FLI LY
Sbjct: 216 KRDGRVVPDWTTYSNLASIYVEAGLFEKAEAA-LKELEKRNTSNDLEAYQFLITLYGRTQ 274
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
N ++ +W+SL+ + + +Y+ ++ L L +W+
Sbjct: 275 NLVEVHHVWRSLKRNNPRKANMSYLNMIQVLANLKDLPAAEACFKEWE 322
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 147/272 (54%), Gaps = 6/272 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E++FE +P AK T +LLH Y +KAE + + + + AL
Sbjct: 116 VAKVRGLASAEKFFEDVPERAKGPSTCNSLLHAYVQHGARDKAEAMLKEMADAGYLTCAL 175
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MM+LYMSVG++EKV +++E+ R+ +PD+ TYN+W++ C+ ++ +K D M
Sbjct: 176 PFNHMMSLYMSVGELEKVPEMIKEL-RRYTIPDLVTYNIWLTYCSRKNSVKSAEKVFDLM 234
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D DW+ + L +IYI A V + LVE EK ++++ Y L+ +YA L
Sbjct: 235 K-DDRVVPDWMTFSLLASIYINAGLHVKGRDA-LVEMEKRASRKERAAYSSLLTMYASLS 292
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-QSATSDFDISA 239
++ +D++W +R T +K + Y C+L+S G + + +W+ QS T D I
Sbjct: 293 DRGNLDRVWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAAEFVYGEWESQSGTKDSRIP- 351
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N +L + G EKA F ++QK P+
Sbjct: 352 -NTILSFYIKNGEMEKAESFLQYIVQKGVKPS 382
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 133/228 (58%), Gaps = 1/228 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L ++K+ N +F A+
Sbjct: 96 VAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAEALMGKMKELNFAFTAM 155
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY V Q EKV V++++K +V+PDI+TYN+W+ + AA ++I V++ ++EM
Sbjct: 156 CYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIKGVERVIEEM 215
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + DW Y NL +IY+ A AE++ L E EK T Y FLI LYA
Sbjct: 216 KRDGRVTPDWTTYSNLASIYVDAGLFEKAEAA-LKELEKWNTSNDLEAYQFLITLYARTQ 274
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
N ++ ++W+SL+ + + + +Y+ ++ + L L +W+
Sbjct: 275 NLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACFKEWE 322
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 133/228 (58%), Gaps = 1/228 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L ++K+ N +F A+
Sbjct: 96 VAKSRGIAAAEKYFLDLPETSKTHLTYGALLNCYCKDLMTEKAEALMGKMKELNFAFTAM 155
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY V Q EKV V++++K +V+PDI+TYN+W+ + AA ++I V++ ++EM
Sbjct: 156 CYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIKGVERVIEEM 215
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + DW Y NL +IY+ A AE++ L E EK T Y FLI LYA
Sbjct: 216 KRDGRVTPDWTTYSNLASIYVDAGLFEKAEAA-LKELEKWNTSNDLEAYQFLITLYARTQ 274
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
N ++ ++W+SL+ + + + +Y+ ++ + L L +W+
Sbjct: 275 NLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPGAEACFKEWE 322
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 143/270 (52%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E YF LP +K Y ALL+ Y TEK+E L E++K+ +L +++
Sbjct: 100 LAKARGITAAENYFVSLPEPSKNHLCYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSM 159
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +MTLY VGQ EK+ +++E+K NV+ D +TYN+W+ + AA +I V++ DEM
Sbjct: 160 PYNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDSYTYNVWMRALAAVNDISGVERVHDEM 219
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ DW Y NL +I++ A AE + L E EK + Y FLI LY G
Sbjct: 220 KRGGQVTGDWTTYSNLASIFVDAGLFDKAEVA-LKELEKRNAFKDLTAYQFLITLYGRTG 278
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ ++W+SLR+ K + +Y+ ++ + L L + +W + +DI
Sbjct: 279 NLYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFREW-ECGCPTYDIRVA 337
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+ A+ + + EKA E ++ P
Sbjct: 338 NVLIRAYVKLDMLEKAEELKERARRRGAKP 367
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 139/270 (51%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ + E YFE LP S+ LLH Y + EKAE L ++ L+ +
Sbjct: 116 IIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDLGLTVSPH 175
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NEMM LYM+ Q E+V V+ ++K+ + ++ +YNLW+S+C+ + + +M
Sbjct: 176 PFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASAEMVYKDM 235
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D W L NIY+ S L+ + L AEK ++ + Y FLI +YA L
Sbjct: 236 VDDKNVEVGWSTLSTLANIYLK-SGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLS 294
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK+++ ++W++ + ++TS NY+CIL + LG + E I +W +S +DI
Sbjct: 295 NKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREW-ESKCWKYDIRVS 353
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA+ G +KA H+ L++ P
Sbjct: 354 NVLLGAYMRTGSMDKAESLHLHTLERGGCP 383
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 139/270 (51%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ + E YFE LP S+ LLH Y + EKAE L ++ L+ +
Sbjct: 89 IIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDLGLTVSPH 148
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NEMM LYM+ Q E+V V+ ++K+ + ++ +YNLW+S+C+ + + +M
Sbjct: 149 PFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASAEMVYKDM 208
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D W L NIY+ S L+ + L AEK ++ + Y FLI +YA L
Sbjct: 209 VDDKNVEVGWSTLSTLANIYLK-SGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLS 267
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK+++ ++W++ + ++TS NY+CIL + LG + E I +W +S +DI
Sbjct: 268 NKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAERIFREW-ESKCWKYDIRVS 326
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA+ G +KA H+ L++ P
Sbjct: 327 NVLLGAYMRTGSMDKAESLHLHTLERGGCP 356
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 146/270 (54%), Gaps = 4/270 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E++FE LP + +T TALLH Y K KAE L E+++ + N L
Sbjct: 114 VAKVRGLTSAEKFFEDLPDEMRGWQTCTALLHTYVKCKDVVKAEALMEKMRDCSFVKNPL 173
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M++LY++ G+ +K +VEE+K K+ PD+ T+NLW+S C A+LN + K +
Sbjct: 174 PYNHMISLYIADGEFDKAKRIVEELK-KSTTPDVVTFNLWLSMC-ASLNDVESAKKVLLE 231
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
DW+ Y L N+Y+ L +A STL E EK +++ + Y L+ LY +G
Sbjct: 232 LKKLKIEADWITYSTLTNLYLKNKLLEDA-VSTLKEMEKRASRKNRLAYSSLLSLYTNMG 290
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+KD + +IW ++ KM Y C+LSS + L +++ + +W +S + D
Sbjct: 291 DKDAVHRIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKAENLYTEW-ESVSGTGDPQVA 349
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL A+ + E + F+ +++K P
Sbjct: 350 NILLAAYINRNQIEDSENFYRRMVEKGVCP 379
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 149/257 (57%), Gaps = 3/257 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI E YF L SAKT++TY ALL+ Y +KA ELF+++K+ N +AL
Sbjct: 110 LAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMLDKAVELFKKLKELNFVSSAL 169
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M++LY+ VGQ EKV +V E++ K++ D++TYNL ++S A+ + + V++ LD+M
Sbjct: 170 SYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLDKM 229
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
G DW Y NL NIY+ A H A + L + E++ + LI LYA
Sbjct: 230 K-KRGVERDWFTYGNLANIYVDAGHTKKA-NYALQKLEQNKNLHDPEAFRMLINLYARTS 287
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N + +++ W+SL++ K+ +++Y+ +L + LG + + + +W +S S +D+
Sbjct: 288 NLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEW-ESGCSTYDVRLS 346
Query: 241 NRLLGAFSDVGLTEKAN 257
N +L ++ + + E+AN
Sbjct: 347 NVMLESYLNREIIEEAN 363
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 147/270 (54%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E YFE LP K TY +LL++YA A EK E FE++++ + + L
Sbjct: 154 IAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTL 213
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA + D +++ ++M
Sbjct: 214 PFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQM 273
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W Y L +++I + AE S L EAEK T R+ + +L+ LY+ LG
Sbjct: 274 IRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREKKCFHYLMTLYSHLG 332
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ ++W + T + + Y +LS+ + LG ++ + ++W S +S FD
Sbjct: 333 KKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTM 391
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL ++ G KA + ++K P
Sbjct: 392 NILLAWYAREGFVTKAEQTLNRFVEKGGNP 421
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 147/270 (54%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E YFE LP K TY +LL++YA A EK E FE++++ + + L
Sbjct: 174 IAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTL 233
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA + D +++ ++M
Sbjct: 234 PFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQM 293
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W Y L +++I + AE S L EAEK T R+ + +L+ LY+ LG
Sbjct: 294 IRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREKKCFHYLMTLYSHLG 352
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ ++W + T + + Y +LS+ + LG ++ + ++W S +S FD
Sbjct: 353 KKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTM 411
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL ++ G KA + ++K P
Sbjct: 412 NILLAWYAREGFVTKAEQTLNRFVEKGGNP 441
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 147/270 (54%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E YFE LP K TY +LL++YA A EK E FE++++ + + L
Sbjct: 154 IAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTL 213
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA + D +++ ++M
Sbjct: 214 PFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQM 273
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W Y L +++I + AE S L EAEK T R+ + +L+ LY+ LG
Sbjct: 274 IRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREKKCFHYLMTLYSHLG 332
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ ++W + T + + Y +LS+ + LG ++ + ++W S +S FD
Sbjct: 333 KKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTM 391
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL ++ G KA + ++K P
Sbjct: 392 NILLAWYAREGFVTKAEQTLNRFVEKGGNP 421
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 140/271 (51%), Gaps = 3/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYT-ALLHLYAGAKWTEKAEELFERVKQSNLSFNA 59
+ KV GI E YF +P + T + + ALLH Y K KAE L ++ L N
Sbjct: 107 IIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHGYVKVKDVVKAEALMMKLYNLGLIVNC 166
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+NEMM LYM+ Q EKVALV++++KR + ++ +YNLW+SS + +V+ E
Sbjct: 167 YPFNEMMKLYMATSQYEKVALVIDQMKRNKIALNLLSYNLWMSSYGEVSKVVKVELVYKE 226
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M D W L NIY T + +V+ L AEK ++ + Y FL+ Y+ L
Sbjct: 227 MVNDDNVEVGWSTLATLANIY-TKAGIVDKALLALKNAEKILSTSHLLGYFFLMTQYSSL 285
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
NK+ + ++W++ + ++T NY+C+LS + +G L E ++ W+ + +DI
Sbjct: 286 KNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKVGDLLEAEKVFRDWELNCRK-YDIRV 344
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA+ GL KA H+ L + P
Sbjct: 345 SNVLLGAYVRKGLMNKAESLHLHTLDRGGCP 375
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 147/270 (54%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E YFE LP K TY +LL++YA A EK E FE++++ + + L
Sbjct: 154 IAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTL 213
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA + D +++ ++M
Sbjct: 214 PFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQM 273
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W Y L +++I + AE S L EAEK T R+ + +L+ LY+ LG
Sbjct: 274 IRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREKKCFHYLMTLYSHLG 332
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ ++W + T + + Y +LS+ + LG ++ + ++W S +S FD
Sbjct: 333 KKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTM 391
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL ++ G KA + ++K P
Sbjct: 392 NILLAWYAREGFVTKAEQTLNRFVEKGGNP 421
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 156/274 (56%), Gaps = 2/274 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G S E YF L KT +TY ALL+ Y + T+++ ++++K+ L+ + L
Sbjct: 92 IGKVRGFLSAENYFNNLMDHDKTDKTYGALLNCYVRQRQTDRSISHWQKMKEMGLASSPL 151
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN++M LY+++G EKV V+ E+K + PD F+Y + I+S A +I ++K L+EM
Sbjct: 152 AYNDIMCLYINLGLYEKVLHVLTEMKENKISPDNFSYRICINSYGARSDIQGMEKVLNEM 211
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
C G + DW Y + N YI A L + L ++E+ + ++ I Y+ LI LYA LG
Sbjct: 212 ECRLGNAMDWNTYAVVANFYIKAG-LADKAVDALRKSEEKLDKKDGIGYNHLISLYATLG 270
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K ++ +IW + ++ +R+++ +L S + LG L+E +++ +W +S+ + +D+
Sbjct: 271 IKSEVLRIWDLQKSVCKRRINRDFVTMLESLVKLGDLEEAEKVLKEW-ESSGNFYDVRIP 329
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N ++ +S GL EKA L++K A T S
Sbjct: 330 NIVVVGYSKNGLHEKAEASLEALMEKGRATTPNS 363
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 149/257 (57%), Gaps = 3/257 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI E YF L SAKT++TY ALL+ Y +KA ELF+++K+ N +AL
Sbjct: 106 LAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMVDKAVELFKKLKELNFVSSAL 165
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M++LY+ VGQ EKV +V E++ K++ D++TYNL ++S A+ + + V++ L++M
Sbjct: 166 SYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLEKM 225
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
G DW Y NL NIY+ A H A + L + E++ + LI LYA
Sbjct: 226 K-KRGVERDWFTYGNLANIYVDAGHTKKA-NYALQKLEQNKNLHDPEAFRMLINLYARTS 283
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N + +++ W+SL++ K+ +++Y+ +L + LG + + + +W +S S +D+
Sbjct: 284 NLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEW-ESGCSTYDVRLS 342
Query: 241 NRLLGAFSDVGLTEKAN 257
N +L ++ + + E+AN
Sbjct: 343 NVMLESYLNREMIEEAN 359
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 145/274 (52%), Gaps = 2/274 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E +F LP + K Y ALL+ Y + EKAE L + ++ + +AL
Sbjct: 148 IAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVRNRMREKAESLIDEMRGKDYVTHAL 207
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN MMTLYM++ + +KV L++ E+ KN+ DI++YN+W+SSC + D++++ ++M
Sbjct: 208 PYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYNIWLSSCGLQGSADKMEQVFEQM 267
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + +W + + +YI AE L E IT R I Y +L+ LY +G
Sbjct: 268 KSDGSINPNWTTFSTMATMYIKMGKFEKAE-DCLRRVESRITGRDRIPYHYLLSLYGNVG 326
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK+++ ++W + + + Y ++SS + + ++ +I ++W TS +D
Sbjct: 327 NKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDIEGAEKIYEEWLSIKTS-YDPRIA 385
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N + AF G +KA F +L++ P + S
Sbjct: 386 NLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHS 419
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 147/270 (54%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E YFE LP K TY +LL++YA A EK E FE++++ + + L
Sbjct: 154 IAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFATDTL 213
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M Y+ + EKV+++++E+ +NV D+ TYN+WI SCAA + D +++ ++M
Sbjct: 214 PFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYNIWIKSCAAMQDADAMEQVFNQM 273
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W Y L +++I + AE S L EAEK T R+ + +L+ LY+ LG
Sbjct: 274 IRDETVVANWTTYTTLASMHIKLGNSEKAEES-LKEAEKRTTGREKKCFHYLMTLYSHLG 332
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ ++W + T + + Y +LS+ + LG ++ + ++W S +S FD
Sbjct: 333 KKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTM 391
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL ++ G KA + ++K P
Sbjct: 392 NILLAWYAREGFVTKAEQTLNRFVEKGGNP 421
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 144/270 (53%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E YFE LP K TY +LL++YA A+ EK E+ FE++++ + + L
Sbjct: 156 VAKVRGVPHAEEYFESLPDPLKDKRTYGSLLNVYAQARMKEKTEDTFEQMRKKGYASDTL 215
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M Y+ V + +KV+ V +E+K +NV D+ TYN+WI S AA + D + + ++M
Sbjct: 216 PFNVLMNFYVDVEEPQKVSAVTDEMKERNVSFDVCTYNIWIKSFAAMKDADGMDRVFNQM 275
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W Y L +++I + AE L EAEK T R + FLI LY+ L
Sbjct: 276 IADESVVANWTTYTTLASMHIKLGNFEKAE-VCLKEAEKRTTGRDKKCFHFLITLYSYLQ 334
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ +IW + T + + Y +LS+ + LG ++ + ++W S +S FD
Sbjct: 335 KKEEVYRIWNWYKATFSTIHNLGYQEVLSALVRLGDIEGAELLYEEW-ASKSSSFDPKTM 393
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL +S G KA + ++K P
Sbjct: 394 NILLAWYSREGFVVKAEQTLNRFVEKGGNP 423
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 147/264 (55%), Gaps = 2/264 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G S E YF L KT +TY ALL+ Y + T+K+ +++K+ + + L Y
Sbjct: 119 RVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTY 178
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N++M LY +VGQ EKV V+ E+K+ +V PD F+Y + I+S AA +I ++K L EM
Sbjct: 179 NDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMER 238
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
DW Y N YI A L + L ++E+ + +R + Y+ LI LYA LGNK
Sbjct: 239 QPHIVMDWNTYAVAANFYIKAG-LPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNK 297
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + ++ +R+YI +L S + LG L+E +++ +W+ S +D N
Sbjct: 298 AEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNC-YDFRVPNI 356
Query: 243 LLGAFSDVGLTEKANEFHMLLLQK 266
++ +S+ GL EKA L++K
Sbjct: 357 VIIGYSEKGLFEKAEAMLKELMEK 380
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 157/271 (57%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K+ G++S E++FE LP + T+LLH Y K ++KAE LFE++ + + L
Sbjct: 132 ISKIRGLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCL 191
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+++++S GQ EKV+++++E+K K PDI TYNLW+++ A+ +++ +K +
Sbjct: 192 PYNHMLSMFISKGQFEKVSVLIKELKMK-TSPDIVTYNLWLTAFASGNDVEGAEKVYLKA 250
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+S + DWV Y L N+Y +L A+ + L E EK ++++ + Y LI L+A LG
Sbjct: 251 K-ESKLNPDWVTYSVLTNLYAKTDNLEKAKLA-LKEMEKLVSKKNRVAYASLISLHANLG 308
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+KD ++ WK +R + +KM Y+ ++S+ + LG ++ + D+W +S + D
Sbjct: 309 DKDGVNLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEW-ESVSGTGDARIP 367
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N +L + + +F+ +++K P+
Sbjct: 368 NLILAEYMNRDEILLGEKFYERIVEKGINPS 398
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 141/264 (53%), Gaps = 7/264 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E YF LP + K Y ALL+ Y AK +KAE L E+++ + L
Sbjct: 137 IAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPL 196
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MMTLYM++ +++KV ++ E+ KN+ DI++YN+W+SSC +T ++QV ++M
Sbjct: 197 PFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCESTERMEQV---FEQM 253
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ + +W + + +YI AE L + E IT R + Y +LI LY G
Sbjct: 254 KLERTINPNWTTFSTMATMYIKLGQFEKAE-ECLKKVESRITNRDRMPYHYLISLYGSTG 312
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK ++ + W + + + Y ++SS + +G L+ +I ++W S S +D
Sbjct: 313 NKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEW-LSVKSSYDPRIG 371
Query: 241 NRLLGAFSDVGLTEKANEF--HML 262
N LLG + G EKA F HM+
Sbjct: 372 NLLLGCYVKEGFLEKAEGFLDHMI 395
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 141/264 (53%), Gaps = 7/264 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E YF LP + K Y ALL+ Y AK +KAE L E+++ + L
Sbjct: 71 IAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPL 130
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MMTLYM++ +++KV ++ E+ KN+ DI++YN+W+SSC +T ++QV ++M
Sbjct: 131 PFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCESTERMEQV---FEQM 187
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ + +W + + +YI AE L + E IT R + Y +LI LY G
Sbjct: 188 KLERTINPNWTTFSTMATMYIKLGQFEKAE-ECLKKVESRITNRDRMPYHYLISLYGSTG 246
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK ++ + W + + + Y ++SS + +G L+ +I ++W S S +D
Sbjct: 247 NKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEW-LSVKSSYDPRIG 305
Query: 241 NRLLGAFSDVGLTEKANEF--HML 262
N LLG + G EKA F HM+
Sbjct: 306 NLLLGCYVKEGFLEKAEGFLDHMI 329
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 148/270 (54%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E+YF+ LP + K TY +LL++YA A EK E+ FE++++ + + L
Sbjct: 158 IAKVRGVSHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKTEDTFEQMRKKGFASDTL 217
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N +M Y+ G+ +V +++E+K +NV D+ TYN+WI SCAA + +++++ +M
Sbjct: 218 PCNVLMNFYVDSGEPNEVLAIIDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMERVFSQM 277
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W Y L ++YI + AE L +AEK T R+ + +L+ LY+ LG
Sbjct: 278 IADESVVANWTTYTTLASMYIKLGNSEKAE-ECLKDAEKRTTGREKKCFHYLMTLYSHLG 336
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ +IW + T + + Y +LS+ + +G ++ + ++W S +S FD
Sbjct: 337 KKEEVYRIWNWYKATFPMIHNLGYQELLSALVRIGDIEGAELLYEEW-ASKSSSFDPKTM 395
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL ++ GL KA + ++K P
Sbjct: 396 NILLAWYAKEGLITKAEQTLNRFVEKGGNP 425
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 144/255 (56%), Gaps = 4/255 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI + E+YF GLP AK TY ALL+ Y +K EKA +LF ++ ++ + L +
Sbjct: 159 KVRGIEAAEKYFNGLPDPAKNHRTYGALLNCYCSSKKEEKATDLFHKMDDLGIASSTLPF 218
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M+LYM +GQ +KVA + EE+K KNV PD T + ++S AA ID V++ L EM
Sbjct: 219 NNLMSLYMKLGQHKKVAGLFEEMKAKNVKPDNLTCCVLMTSYAALNKIDAVEEVLKEME- 277
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGN 181
+ + W Y L +IY++A LV S L + E + R +DFL+ LYA +GN
Sbjct: 278 EKNAALGWSAYSTLASIYVSAG-LVEKAESALKKLEGLVQPRDGRQPFDFLMSLYASVGN 336
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+++++W ++ T K+T+ +Y +L + L + +I ++W +S +D+ N
Sbjct: 337 LSEVNRVWDVVKATFPKVTNTSYFSMLQALYKLNDADRIKQIFEEW-ESNHECYDVKLTN 395
Query: 242 RLLGAFSDVGLTEKA 256
+ A GLT++A
Sbjct: 396 IMTRAHLKNGLTKEA 410
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 144/274 (52%), Gaps = 5/274 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E YF LP + K Y ALL+ Y AK +KAE L E+++ + L
Sbjct: 346 IAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPL 405
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MMTLYM++ +++KV ++ E+ KN+ DI++YN+W+SSC +T ++QV ++M
Sbjct: 406 PFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCESTERMEQV---FEQM 462
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ + +W + + +YI AE L + E IT R + Y +LI LY G
Sbjct: 463 KLERTINPNWTTFSTMATMYIKLGQFEKAE-ECLKKVESRITNRDRMPYHYLISLYGSTG 521
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK ++ + W + + + Y ++SS + +G L+ +I ++W S S +D
Sbjct: 522 NKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEW-LSVKSSYDPRIG 580
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N LLG + G EKA F +++ P + +
Sbjct: 581 NLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTT 614
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 145/266 (54%), Gaps = 3/266 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E YF+ L K +TY ALL+ Y EK+ +++K+ AL
Sbjct: 78 IGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKSLSHVQKMKELGFFSTAL 137
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN++M LY++ G +EKV V+ ++K + PD+F+Y + + S + D V+K L EM
Sbjct: 138 NYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKSYGERSDFDNVEKILREM 197
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S S DW + + NIY+ A L L + E+ + + + Y+ LI LYA LG
Sbjct: 198 ESQSHISMDWRTFATVANIYLEAG-LKEKALVYLKKCEEKVNKNA-LGYNHLISLYASLG 255
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NKD++ ++W+ + +K +R+YI IL S + LGHL+E +++ W +S+ +D
Sbjct: 256 NKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKLLQDW-ESSCQYYDFRVP 314
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQK 266
N +L +S GL EKA +++K
Sbjct: 315 NVVLIGYSRKGLPEKAEAMLQDIIEK 340
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 127/228 (55%), Gaps = 1/228 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + E+YF LP ++KT TY ALL+ Y TEKAE L ++ + N +F A+
Sbjct: 96 IAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMAKMSELNFAFTAM 155
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +MT+Y V Q EKV +++ +K +V+P +FTYN+W+ + AA +I V++ ++EM
Sbjct: 156 PFNSLMTMYTKVNQPEKVPGIIQYMKADDVLPHVFTYNVWMRALAALNDIPGVERVIEEM 215
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + DW Y NL +IY+ A AE++ L E EK T Y FLI LY
Sbjct: 216 KRDGRVAPDWTTYSNLASIYVDAGLFEKAEAA-LKELEKRNTSNDVEAYQFLITLYGRTQ 274
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
N ++ ++W+SL+ +M + +Y+ ++ L L +W+
Sbjct: 275 NLVEVHRVWRSLKRNNPRMANMSYLNMIQVLANLKDLPAAEACFKEWE 322
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 145/264 (54%), Gaps = 2/264 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G S E YF L KT +TY ALL+ Y + T+K+ +++K+ + + L Y
Sbjct: 119 RVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTY 178
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N++M LY +VGQ EKV V+ E+K+ NV PD F+Y + I+S A +I ++ L EM
Sbjct: 179 NDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMER 238
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
DW Y N YI A L + L ++E+ + +R + Y+ LI LYA LGNK
Sbjct: 239 QPHIVMDWNTYAVAANFYIKAG-LPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNK 297
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + ++ +R+YI +L S + LG L+E +++ +W+ S +D N
Sbjct: 298 AEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNC-YDFRVPNI 356
Query: 243 LLGAFSDVGLTEKANEFHMLLLQK 266
++ +S+ GL EKA L++K
Sbjct: 357 VIIGYSEKGLFEKAEAMLKELMEK 380
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 148/269 (55%), Gaps = 4/269 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+ G++ E++FE LP + T+LLH Y +EKAE L E++ + + L +
Sbjct: 128 KIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLSEKAEALMEKMSECGFLKSPLSF 187
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N M++L++S Q+EKV ++E +K KN PD+ TYNL ++ C + + + EM
Sbjct: 188 NHMLSLHISNKQLEKVPALIEGLK-KNTKPDVVTYNLLLNVCTLQNDTEAAENIFLEMK- 245
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ DWV + L N+Y + L ++TL E EK + ++ L+ LY LG+K
Sbjct: 246 KTKIQPDWVSFSTLANLYC-KNQLTEKAAATLKEMEKMAFKSNRLSLSSLLSLYTNLGDK 304
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
+++ +IWK L+ + +KM+ R Y+C++SS + L L+E ++ +W +S + D N
Sbjct: 305 NEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEEAEKLYTEW-ESVSGTRDTRVSNV 363
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
+LGA+ E+A F+ +LQK P+
Sbjct: 364 MLGAYIKKNQIEQAESFYNRMLQKGTVPS 392
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 150/272 (55%), Gaps = 3/272 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G+ S E YF+ L + +TY ALL+ Y +K+ +++K+ + + L Y
Sbjct: 115 RVRGLESAESYFQNLVNQDRNDKTYGALLNCYVREGLVDKSLYHMQKMKELGFASSPLNY 174
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N++M LY GQ+EKV V+ E+K + PD+F+Y + +SSCAA ++ V++ L+EM
Sbjct: 175 NDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYRICMSSCAARSDLKGVEEILEEMEN 234
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
S S DWV Y + +IY+ AS L L + E+ + R + Y+ LI L A LG K
Sbjct: 235 QSHISIDWVTYSTVASIYVKAS-LKEKALIYLKKCEQKVN-RDALGYNHLISLNASLGIK 292
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
D++ ++W ++ +K +R+YI +L + + L L+E +++ +W +S+ +D N
Sbjct: 293 DEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADKLLQEW-ESSCQCYDFRVPNV 351
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
LL + GL EKA +++K PT S
Sbjct: 352 LLIGYCQQGLIEKAEAMLKDIVKKQKNPTPNS 383
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 148/270 (54%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E+YF+ LP + K TY +LL++YA A EK EE FE++++ + + L
Sbjct: 156 IAKVRGVPHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKTEETFEQMRKKGFASDTL 215
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N +M Y+ G+ ++V +++E+K +NV D+ TYN+WI SCAA + +++++ +M
Sbjct: 216 PCNVLMNFYVDSGEPDEVLAIIDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMEQVFSQM 275
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W Y L ++Y+ + AE L +AEK T R+ + +L+ LY+ LG
Sbjct: 276 IADESVVANWTTYTTLASMYLKLGNSEKAE-ECLKDAEKRTTGREKKCFHYLMTLYSHLG 334
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ +IW + T + + Y +LS+ + +G ++ + ++W + S FD
Sbjct: 335 KKEEVYRIWNWYKATFPMIHNLGYQELLSALIRIGDIEGAELLYEEWASKSYS-FDPKTM 393
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL ++ GL KA + ++K P
Sbjct: 394 NILLAWYAKEGLITKAEQTVNRFVEKGGNP 423
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 142/272 (52%), Gaps = 6/272 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E++FE +P AK T ALLH Y +KAE + + + AL
Sbjct: 108 VAKVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVRDKAEAMLREMADAGYLTCAL 167
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MM++YMS G++EKV +++E+ R+ +PD+ TYN+W++ C+ ++ +K D M
Sbjct: 168 PFNHMMSMYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLTYCSRKNSVKTAEKVFDLM 226
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D DW+ + + +IYI A V + LVE EK ++++ Y L+ LYA L
Sbjct: 227 K-DDKVFPDWMTFSLMASIYINAGLHVKGRDA-LVEMEKRASRKERTAYSSLLTLYASLS 284
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-QSATSDFDISA 239
++ +D++W +R +K + Y C+L+S G + + +W+ +S T D I
Sbjct: 285 DRGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAESVYSEWESESGTRDSRIP- 343
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N +L G E A F ++QK P+
Sbjct: 344 -NTILSFHIKNGKMEMAESFLQHIMQKGVKPS 374
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 151/274 (55%), Gaps = 2/274 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E YF L + K Y ALL+ Y A+ EKAE L E++++ + + +AL
Sbjct: 148 VAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARMREKAESLIEKMRKKDYTTHAL 207
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MMTLYM++ + +KV +++ E+ KN+ DI++YN+W+SS + +I+++++ ++M
Sbjct: 208 PFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNIWLSSRGSQGSIERMEEVYEQM 267
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
DS + +W + + +YI L AE L E IT R I Y +L+ LY +G
Sbjct: 268 KLDSTINPNWTTFSTMATMYIKMGQLEKAE-DCLRRVESRITGRDRIPYHYLLSLYGNVG 326
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK++I ++W + + + Y I+SS + + ++ +I ++W S +D
Sbjct: 327 NKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEGAEKIYEEW-LPVKSSYDPRIG 385
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N L+G + G +KA F +++ P +++
Sbjct: 386 NLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSST 419
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G++ YFE +P S LLH Y + KAE ++ S L
Sbjct: 124 IVKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVKERDISKAESFMIKLSSSGLLVTPH 183
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YNEMM LYM++ Q EKV LV+ E+KR + ++ +YNLW+ + + + + EM
Sbjct: 184 PYNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLSYNLWMGAFGEVFEVAKAEMVYKEM 243
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D W +L N+YI A V+ L +AE ++ + Y FLI LY+ L
Sbjct: 244 VSDENVGVGWSTLASLANVYIKAG-FVDKALLVLKDAEMKLSTNGRLGYFFLITLYSSLK 302
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK+ + ++W++ + ++ +Y+C++S + +G L ++ +W ++ +DI
Sbjct: 303 NKEGVLRLWEASKAVGGRIPCADYMCVISCLVKVGDLVAAEQVFAEW-ETNCFKYDIRVS 361
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N LLGA+ GL KA FH+ +++ P
Sbjct: 362 NVLLGAYVRNGLMGKAESFHLHTVERGGCPN 392
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 144/271 (53%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S ++FE +P AK T ALLH Y EKAE + + ++ AL
Sbjct: 108 VAKVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGAREKAEAMMAEMARAGYLTCAL 167
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MM+LYM+ G++E+V +++E+ R+ VPD+ TYN+W++ C+ ++ +K M
Sbjct: 168 PFNHMMSLYMASGELERVPEMIKEL-RRYTVPDLVTYNMWLTYCSKKKSVKSAEKVFALM 226
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D DW+ + L +IYI A V ++ LVE EK ++++ Y L+ LYA L
Sbjct: 227 K-DDRVVPDWMTFSLLGSIYINAGLHVEGRNA-LVEMEKMASRKERAAYSSLLTLYASLS 284
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++ +D++W +R T +K + Y C+L+S + + +W +SA+ D
Sbjct: 285 DRGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAEGLYREW-ESASGTRDSRIP 343
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N +L + G+ EKA F +++K P+
Sbjct: 344 NTILSYYIKNGMIEKAESFLGQIVEKGVKPS 374
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 147/272 (54%), Gaps = 2/272 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E +F L K +TY ALL++Y ++ EKAE LF+ ++ +AL
Sbjct: 160 IAKVRGLSSAEAFFLSLEDKLKDKKTYGALLNVYVHSRSKEKAESLFDTMRSKGYVIHAL 219
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MMTLYM++ + KV ++ E+ KN+ DI+TYN+W+SSC + +++++++ ++M
Sbjct: 220 PFNVMMTLYMNLNEYAKVDILASEMMEKNIQLDIYTYNIWLSSCGSQGSVEKMEQVFEQM 279
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W + + ++YI AE L + E I R I + +L+ LY +G
Sbjct: 280 EKDPSIIPNWSTFSTMASMYIRMDQNEKAE-ECLRKVEGRIKGRDRIPFHYLLSLYGSVG 338
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
KD++ ++W + + + + Y I+SS + L ++ ++ ++W S S +D
Sbjct: 339 KKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDIEVAEKLYEEW-ISVKSSYDPRIG 397
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
N L+G + G T+KA F +L C P +
Sbjct: 398 NLLIGWYVKKGDTDKALSFFEQMLNDGCIPNS 429
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 141/276 (51%), Gaps = 10/276 (3%)
Query: 1 MTKVFGIHSGERYFEGL---PLSAKTSET-YTALLHLYAGAKWTEKAEELFERVKQSNLS 56
+ K G+ GE YFE L +S + +++ Y LL Y K ++AE L E++
Sbjct: 116 IIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFL 175
Query: 57 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 116
+NEMM LY + GQ EKV +VV +K + ++ +YNLW+++C + V+
Sbjct: 176 VTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETV 235
Query: 117 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLII 174
EM D W L N+YI + E + LV +AEK + + + Y FLI
Sbjct: 236 YKEMVGDKSVEVGWSSLCTLANVYIKSGF---DEKARLVLEDAEKMLNRSNRLGYFFLIT 292
Query: 175 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 234
LYA LGNK+ + ++W+ + +++ NYIC+LSS + G L+E + +W ++ +
Sbjct: 293 LYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEW-EAQCFN 351
Query: 235 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+D+ N LLGA+ G KA H +L++ P
Sbjct: 352 YDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTP 387
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 143/272 (52%), Gaps = 2/272 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ + E +F LP + K Y ALL+ Y + EKAE LF+ ++ +AL
Sbjct: 148 IAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMREKAETLFDEMRDKGYVTHAL 207
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MTLYM++ + +KV L++ E+ KN+ DI++YN+W+SSC + + D++++ ++M
Sbjct: 208 PFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWLSSCGSQGSADKMEQVYEQM 267
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + +W + + +YI AE L E IT R I Y +L+ LY +G
Sbjct: 268 KSDRSINPNWTTFSTMATMYIKMGQFEKAE-DCLRRVESRITGRDRIPYHYLLSLYGNVG 326
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK+++ ++W + + + Y I+SS + L ++ +I ++W TS +D
Sbjct: 327 NKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAEKIYEEWLSIKTS-YDPRIA 385
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
N + A+ G ++A F +L+ P +
Sbjct: 386 NLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNS 417
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 145/274 (52%), Gaps = 2/274 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV GI S E YF LP K Y ALL+ YA + EKAE L E+++ + + L
Sbjct: 149 ISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKAENLLEKMRTKGFTTHPL 208
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MMTLYM+V + EKV +V E+ ++ DI++YN+W+SSC + +++++ ++M
Sbjct: 209 PFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQM 268
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D + +W + + +YI + AE L E I R I Y +LI LY +G
Sbjct: 269 KQDRTINANWTTFSTMATMYIKMGLMEKAE-ECLRRVESRIVGRDRIPYHYLISLYGSVG 327
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NK+++ ++W + + + Y I+S+ + +G ++ +I ++W + S +D
Sbjct: 328 NKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEW-LTVKSTYDPRIA 386
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N +G + G T KA F +++ P +++
Sbjct: 387 NLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 143/271 (52%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S ++FE +P AK T ALLH Y EKAE + + + AL
Sbjct: 109 VAKVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGAREKAEAMLAEMARVGYLTCAL 168
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MM+LYM+ G++E+V +++E+ R+ +PD+ TYN+W++ C+ ++ +K M
Sbjct: 169 PFNHMMSLYMATGELERVPEMIKEL-RRYTLPDLVTYNIWLTYCSKKDSVKSAEKVFGLM 227
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D DW+ + L +IYI A V ++ LVE EK ++++ Y L+ LYA L
Sbjct: 228 K-DDCVVPDWMTFSLLGSIYINAGLHVEGRNA-LVEMEKRASRKERAAYSSLLTLYASLS 285
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++ +D++W +R T +K + Y C+L+S L + I +W +S + D
Sbjct: 286 DRGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAAESIFSEW-ESTSGTRDSRIP 344
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N +L + G+ +KA F +++K P+
Sbjct: 345 NTILSYYIKNGMIKKAESFLDHIVEKGVKPS 375
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 155/271 (57%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K+ G++S E++FE +P + T+LLH Y K ++KAE LFE++ + + L
Sbjct: 139 ISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCL 198
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+++Y+S GQ EKV ++++E+K + PDI TYNLW+++ A+ +++ +K +
Sbjct: 199 PYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVYLK- 256
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ + + DWV Y L N+Y ++ A + L E EK ++++ + Y LI L+A LG
Sbjct: 257 AKEEKLNPDWVTYSVLTNLYAKTDNVEKARLA-LREMEKLVSKKNRVAYASLISLHANLG 315
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+KD ++ WK ++ + +KM Y+ ++S+ + LG ++ + D+W +S + D
Sbjct: 316 DKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEW-ESVSGTGDARIP 374
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N +L + + +F+ +++K P+
Sbjct: 375 NLILAEYMNRDEVLLGEKFYERIVEKGINPS 405
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 155/271 (57%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K+ G++S E++FE +P + T+LLH Y K ++KAE LFE++ + + L
Sbjct: 139 ISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCL 198
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+++Y+S GQ EKV ++++E+K + PDI TYNLW+++ A+ +++ +K +
Sbjct: 199 PYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVYLK- 256
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ + + DWV Y L N+Y ++ A + L E EK ++++ + Y LI L+A LG
Sbjct: 257 AKEEKLNPDWVTYSVLTNLYAKTDNVEKARLA-LKEMEKLVSKKNRVAYASLISLHANLG 315
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+KD ++ WK ++ + +KM Y+ ++S+ + LG ++ + D+W +S + D
Sbjct: 316 DKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEW-ESVSGTGDARIP 374
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
N +L + + +F+ +++K P+
Sbjct: 375 NLILAEYMNRDEVLLGEKFYERIVEKGINPS 405
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 142/254 (55%), Gaps = 2/254 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G S E YF L K +TY ALL+ Y + T+K+ +++K+ + ++L Y
Sbjct: 109 RVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLTY 168
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N++M LY +VGQ EKV V+ E+K NV+PD F+Y L I+S A +++ ++K L+EM
Sbjct: 169 NDIMCLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEH 228
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
DW Y N YI L + TL ++E + ++ Y+ LI LYA LGNK
Sbjct: 229 QPDIVMDWNTYAVAANFYIIGD-LTDKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNK 287
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + ++ +++YI ++ S L L +E +++ +W +S+ + +D+ N
Sbjct: 288 TEVLRLWDLEKSACERHINKDYIIMMESLLKLSEFEEAEKMLKEW-ESSGNFYDVRVPNT 346
Query: 243 LLGAFSDVGLTEKA 256
L+ +S GL EKA
Sbjct: 347 LIIGYSRKGLCEKA 360
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 137/251 (54%), Gaps = 2/251 (0%)
Query: 6 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
GI + E YF+GL S + T+ ALL Y +EKA LFE++ + +L +N +
Sbjct: 92 GIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKALTLFEKMDKMKFLLTSLPFNNL 151
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
++L++ + Q EKV +V+E+K+K V P FTYN+W+ S + + V++ LDEM D
Sbjct: 152 ISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSYGCLNDFEGVERVLDEMKMDGQ 211
Query: 126 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
+ W Y NL IY+ A H AES+ L + E+ I + Y FLI LYAG N ++
Sbjct: 212 KNFSWTTYTNLATIYVKAGHFDKAESA-LKKVEEQIERDYREAYHFLITLYAGTSNLGEV 270
Query: 186 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 245
+++W SL+ T+ +Y+ +L + L ++ + + +W+ S S +D+ N +
Sbjct: 271 NRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKEWESSCHS-YDMRLANVAIR 329
Query: 246 AFSDVGLTEKA 256
A + + E+A
Sbjct: 330 ACLEHDMYEEA 340
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 151/273 (55%), Gaps = 8/273 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K G+ E+YF + S++ + Y ALLH Y K +KAE + +++++ L
Sbjct: 114 ISKARGLEQAEKYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKTPL 173
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+ LY +G+ EK+A +++E++ + PD FTYN+ +++ AA +I ++K L +M
Sbjct: 174 SYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAAASDITNMEKLLSKM 233
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQ-WITYDFLIILYA 177
D + DW Y + N Y A +E+S L+ +AE+ I +Q W+ Y +L+ LYA
Sbjct: 234 EADPLVATDWHTYFVVGNGYFKAGL---SENSILMLKKAEQFIGDKQKWLAYQYLMTLYA 290
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
+GNKD++ ++W +L +K + Y+CI+SS + L + I+ +W+ TS FD
Sbjct: 291 AIGNKDEVYRVW-NLYTNLRKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDTS-FDF 348
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N ++ ++ G +KA + L++ P
Sbjct: 349 RIPNMMINSYCMKGFVDKAEAYINRLIETGKEP 381
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 141/257 (54%), Gaps = 3/257 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ + E+YF LP SAK TY ALL+ Y EKA LF+++ + +S +L
Sbjct: 86 ISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALTLFKKMDELKIS-TSL 144
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +MT+YM + EKV ++ E+K++ FTYN+W++SCA+ +I +V++ L+EM
Sbjct: 145 SFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCASLNDIGKVEEILEEM 204
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAE-SSTLVEAEKSITQRQWITYDFLIILYAGL 179
+ DW Y NL + Y+ A AE + +E E + + Y LI LYA
Sbjct: 205 KMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSDKNDRLVYHCLISLYAST 264
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
N ++++IW +L+ MT+ +Y+ +L + L ++ + +W +S +FD+
Sbjct: 265 SNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYKEW-ESNCRNFDLRI 323
Query: 240 CNRLLGAFSDVGLTEKA 256
N ++GA+ + E A
Sbjct: 324 VNDIIGAYLQQDMYEDA 340
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 146/272 (53%), Gaps = 4/272 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI E YF GL SAK TY +LL+ Y +EKA +LF+++ + N+L
Sbjct: 121 ICKTKGITEAENYFNGLVPSAKNPATYGSLLNSYCKKLDSEKALQLFQKMDKLKFFRNSL 180
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M++YM +GQ EKV +V ++K+ N+ P FTYN+WI S + + +KK L+EM
Sbjct: 181 PFNNLMSMYMRLGQQEKVPELVSQMKQMNLPPCTFTYNIWIQSLGHMRDFEGIKKVLEEM 240
Query: 121 SCDS--GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 178
D G + +W Y NL +Y +A A+ + L E+ I Y FL+ LY G
Sbjct: 241 RNDVNFGNNFNWTTYSNLAAVYTSAGEFERAKLA-LKMMEERIDSHDRNAYHFLLTLYGG 299
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
+ + +++ ++W L+ ++T+ +Y+ +L + L ++ + ++ ++W+ TS +D+
Sbjct: 300 IADLEEVHRVWGCLKAKFNQVTNASYLVMLQALARLKDVEGISKVFEEWESVCTS-YDMR 358
Query: 239 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N + + + G+ +A +++ P
Sbjct: 359 VANVAIRVYLEKGMYNEAEAVFDGAMERTPGP 390
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 145/272 (53%), Gaps = 2/272 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E +F L K TY ALL++Y ++ EKAE LF+ ++ +AL
Sbjct: 159 IAKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYVHSRSKEKAESLFDTMRSKGYVIHAL 218
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N MMTLYM++ + KV ++ E+ KN+ DI+TYN+W+SSC + +++++++ ++M
Sbjct: 219 PINVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIYTYNIWLSSCGSQGSVEKMEQVFEQM 278
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W + L ++YI + AE L + E I R I + +L+ LY +G
Sbjct: 279 ERDPTIVPNWSTFSTLASMYIRMNQNEKAE-KCLRKVEGRIKGRDRIPFHYLLSLYGSVG 337
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
KD++ ++W + + ++ + Y I+SS + L ++ ++ ++W S S +D
Sbjct: 338 KKDEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLDDIEGAEKLYEEWI-SVKSSYDPRIG 396
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
N L+G + T+KA F + C P +
Sbjct: 397 NLLMGWYVKKDDTDKALSFFEQISNDGCIPNS 428
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 146/272 (53%), Gaps = 3/272 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G+ S E YF + K + Y ALL+ Y + +K+ +++K+ + L Y
Sbjct: 117 QVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPY 176
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M LY++ Q+EK+ V+ E++ + PD F+Y L I+S A +++ ++K L+EM
Sbjct: 177 NGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMES 236
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
S DW+ Y + N YI A +N ++ ++ ++ + + Y+ LI LYA LG+K
Sbjct: 237 KSHIHIDWMTYSMVANFYIKAG--LNEKALFFLKKAETKLHKDPLGYNHLISLYASLGSK 294
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W+ + +K+ +R+YI +L S + LG L++ ++ +W+ S +D N
Sbjct: 295 AEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNC-YDFRVPNT 353
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
LL F GL EKA ++++ PT S
Sbjct: 354 LLIGFCQKGLIEKAESMLRDIVEEGKTPTPNS 385
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 141/255 (55%), Gaps = 4/255 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV G+ + E+YFEGLP AK T+ ALL+ Y +K EKA +L+ ++ + +S + L
Sbjct: 165 KVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSSKEEEKATDLYRKMDELGISSSTLPI 224
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M+LYM +GQ +KV + EE+K KNV PD T + ++S AA ID V++ L EM
Sbjct: 225 NNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCILMTSLAALNKIDDVEQVLKEME- 283
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGN 181
+ G W Y L +IY +A LV S L + E + R +DFL+ LYA +GN
Sbjct: 284 EKDGVLGWSAYSTLASIYQSAG-LVEKAESALKKLEGLVQDRDGRQPFDFLMSLYASVGN 342
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
++ ++W ++ T K+T+ +Y +L + L L + ++ ++W +S +D N
Sbjct: 343 LSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADYMKQVFEEW-ESNHEFYDAKLTN 401
Query: 242 RLLGAFSDVGLTEKA 256
+ A G+ ++A
Sbjct: 402 VMTRAHLKNGMAKEA 416
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 146/272 (53%), Gaps = 3/272 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G+ S E YF + K + Y ALL+ Y + +K+ +++K+ + L Y
Sbjct: 117 QVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPY 176
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M LY++ Q+EK+ V+ E++ + PD F+Y L I+S A +++ ++K L+EM
Sbjct: 177 NGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMES 236
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
S DW+ Y + N YI A +N ++ ++ ++ + + Y+ LI LYA LG+K
Sbjct: 237 KSHIHIDWMTYSMVANFYIKAG--LNEKALFFLKKAETKLHKDPLGYNHLISLYASLGSK 294
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W+ + +K+ +R+YI +L S + LG L++ ++ +W+ S +D N
Sbjct: 295 AEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNC-YDFRVPNT 353
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
LL F GL EKA ++++ PT S
Sbjct: 354 LLIGFCQKGLIEKAESMLRDIVEEGKTPTPNS 385
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 149/301 (49%), Gaps = 37/301 (12%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K GI + E YF+ LP S + TY+ LL+ Y +EKA LFE++ + L ++ +
Sbjct: 78 KTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKALTLFEKMDKMKLLSTSMPF 137
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +MTL+M +GQ EKV +V+E+K++ V P FTYN+W+ S + + V++ LDEM
Sbjct: 138 NNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYGCLNDFEGVQRVLDEMKT 197
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI---------------TQRQWI 167
D + W Y NL IY+ A AES+ L + E+ I R+
Sbjct: 198 DGKENFSWTTYSNLATIYVKAGLFDKAESA-LRKLEEQIECGRDCDFQKKRRHDADRE-- 254
Query: 168 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 227
Y FLI LYAG N ++ ++W SL+ + + T+ +Y+ +L + L ++ + + +W
Sbjct: 255 AYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAKLKDVEGILKCFKEW 314
Query: 228 KQSATSDFDISACNRLLGA-------------FSDV-----GLTEKANEFHMLLLQKNCA 269
+ S S +D+ N + A F + GL KA E M+ KN
Sbjct: 315 ESSCHS-YDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKAREMFMVFFLKNHQ 373
Query: 270 P 270
P
Sbjct: 374 P 374
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 145/271 (53%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K G+ E YF + S++ + Y ALLH Y K +KAE + +++++ L
Sbjct: 114 ISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKTPL 173
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+ LY +G+ EK+ +V+E++ + + FTYN+ +++ AA +I ++K L +M
Sbjct: 174 SYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRMNAYAAASDITNMEKLLSKM 233
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGL 179
D + DW Y + N Y A L S L +AE+ I +Q W+ Y +L+ LYA +
Sbjct: 234 EADPLVATDWHIYFTVGNGYFKAG-LSENSISMLKKAEQLIGDKQKWLAYQYLMTLYAAI 292
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GNKD++ ++W +L QK + Y+CI+SS + L + I+ +W+ TS FD
Sbjct: 293 GNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDTS-FDFKI 350
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N ++ ++ G +KA + L++ P
Sbjct: 351 PNMMINSYCTKGFVDKAEAYISRLIENGKEP 381
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 136/247 (55%), Gaps = 2/247 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K G+ + E YF L SAK TY LL+ Y K EKA LFE++ + N + +L
Sbjct: 160 LSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSL 219
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M+L+M +G+ E V +V+E+K++++ PD FTYN+ + S A +I+ ++ L+E+
Sbjct: 220 TFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEI 279
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
++ W Y NL +Y+ A AE + L + E+ + + Y FLI LYAG+
Sbjct: 280 KRENEDKLSWTTYSNLAAVYVNARLFEKAELA-LKKLEEEMGFHDRLAYHFLISLYAGIN 338
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N +++++W SL+ K + +Y +L + L + + ++WK S S FD+
Sbjct: 339 NLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFS-FDVRLA 397
Query: 241 NRLLGAF 247
N + AF
Sbjct: 398 NVAVRAF 404
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 136/247 (55%), Gaps = 2/247 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K G+ + E YF L SAK TY LL+ Y K EKA LFE++ + N + +L
Sbjct: 121 LSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSL 180
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M+L+M +G+ E V +V+E+K++++ PD FTYN+ + S A +I+ ++ L+E+
Sbjct: 181 TFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEI 240
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
++ W Y NL +Y+ A AE + L + E+ + + Y FLI LYAG+
Sbjct: 241 KRENEDKLSWTTYSNLAAVYVNARLFEKAELA-LKKLEEEMGFHDRLAYHFLISLYAGIN 299
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N +++++W SL+ K + +Y +L + L + + ++WK S S FD+
Sbjct: 300 NLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFS-FDVRLA 358
Query: 241 NRLLGAF 247
N + AF
Sbjct: 359 NVAVRAF 365
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 141/257 (54%), Gaps = 6/257 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSET-YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
K GI + E YF GL SAK T Y ALL+ Y ++KA LF+ + + +++L
Sbjct: 117 KARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKALALFQEMDEKKFLYSSLP 176
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N +M++YM +GQ EKV +V+E+K++ V P FTYN+W+ S + V + L E+
Sbjct: 177 FNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQSYGCLNDFQGVDRVLREIV 236
Query: 122 CDSGGSDD--WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
D GG D+ W Y NL IY+ A AES+ L + E + R Y FLI +YAG
Sbjct: 237 ND-GGKDNLQWTTYSNLATIYLKAGIFEKAESA-LKKLEAIMGFRNREAYHFLISIYAGT 294
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GN ++++++W L+ + + + +Y+ +L + L ++ V + +W +S +++D+
Sbjct: 295 GNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREW-ESGCTNYDMRI 353
Query: 240 CNRLLGAFSDVGLTEKA 256
N + F + E+A
Sbjct: 354 ANVAIRVFLQHDMYEEA 370
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 141/254 (55%), Gaps = 2/254 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G S E YF L K +TY ALL+ Y + T+K+ +++K+ + ++L Y
Sbjct: 109 RVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVQKRETDKSISHLQKMKEMGFAKSSLSY 168
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N++M LY +VGQ EKV V+ E+K NV PD F+Y L ++S A +++ ++K L+EM
Sbjct: 169 NDIMCLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRLCMNSYGARGDLEGMEKMLNEMEH 228
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
DW Y + YI L + +L ++E + ++ Y+ LI LYA LG K
Sbjct: 229 QPDIVVDWNSYAVAASSYIKGG-LTDKAIDSLKKSETRLDKKDGTGYNHLISLYATLGEK 287
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + T ++ +++YI I++S + L +EV +++ +W+ S +D+ N
Sbjct: 288 TEVLRLWDLEKSTCERPINKDYINIMASLVKLDEFEEVEKVLKEWEASGNF-YDVRVPNT 346
Query: 243 LLGAFSDVGLTEKA 256
L+ +S GL EKA
Sbjct: 347 LIIGYSGKGLYEKA 360
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 143/255 (56%), Gaps = 4/255 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI + E+YF GLP K +TY ALL+ Y AK +KA +++ ++ + +S + L
Sbjct: 136 KVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCSAKMEDKATDIYRKMDELGISSSTLPI 195
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M+LY+ +GQ KV + EE+K KNV PD T L +SS AA ID V + L EM
Sbjct: 196 NNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSSYAALNKIDTVGEVLKEME- 254
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGN 181
+ + W Y L ++Y+ A+ + AES+ L + E I Q +DFL+ LYA +GN
Sbjct: 255 EKKVALGWSAYSTLASLYVNANMVEEAESA-LKKLESLIDVQAGRQPFDFLMSLYASVGN 313
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+++++W ++ QK+T+ +Y+ +L + L + +I + W +S ++D N
Sbjct: 314 LSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQIYEDW-ESNYENYDARLTN 372
Query: 242 RLLGAFSDVGLTEKA 256
+ A GLT++A
Sbjct: 373 MMTRAHLRNGLTKEA 387
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 136/271 (50%), Gaps = 5/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G E Y+ LP SA LLH Y + +KAE ++ L +
Sbjct: 125 IAKVHGTSQAEEYYNKLPNSASREAASFPLLHCYVAERNVQKAESFMASLQSIGLPVDPH 184
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NEMM LY++ + EKV V++ +KR N+ + +YNLW+++C+ + ++ V+ EM
Sbjct: 185 SFNEMMKLYVATCEYEKVFSVIDLMKRNNIPRNALSYNLWMNACSVS-DVTSVQSVFKEM 243
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAES-STLVEAEKSITQRQWITYDFLIILYAGL 179
D W Y L NI++ H +N+++ + L AE ++ Q + Y F++ YA L
Sbjct: 244 VNDGTIEVGWSTYCTLANIFM--KHGLNSKAFACLRTAETKLSTAQRLGYSFVMTCYAAL 301
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G+ D + ++W++ + ++ S NY+ + + +G + I W + D+
Sbjct: 302 GDSDGVMRLWEASKCVPGRIPSANYMSAILCLIKVGDIDRAEWIFGSW-EVECRKHDVRV 360
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA+ G EKA + H+ +L+K P
Sbjct: 361 SNVLLGAYVRNGWIEKAEKLHLHMLEKGGRP 391
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 147/273 (53%), Gaps = 4/273 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G+ + E YF L KT + Y ALL+ Y +K+ F+++K+ F++L Y
Sbjct: 138 QVHGVGAAEAYFNKLADKDKTEKPYGALLNCYTRELLVDKSLAHFQKMKELGFVFSSLPY 197
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S A + ++ L+EM C
Sbjct: 198 NNLMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGARADFFGMENTLEEMEC 257
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ DW Y L N YI + L + S L +AE I + TY+ L+ LY LG+K
Sbjct: 258 EPQIVVDWNTYAVLANNYIKGN-LRDKAISALQKAEAKIDIKDSDTYNHLMSLYGQLGDK 316
Query: 183 DKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
++ ++W +L+M+ ++ +++Y +L+ L L ++E ++ +W +S+ + FD N
Sbjct: 317 SEVKRLW-ALQMSNCKRHINKDYTTMLAMLLKLDEIEEAEALLKEW-ESSENAFDFHVPN 374
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
LL + L +KA L+K PT+ S
Sbjct: 375 VLLTGYRQKDLLDKAEALLDDFLKKGKMPTSTS 407
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 142/272 (52%), Gaps = 2/272 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G+ + E YF L KT + Y ALL+ Y +KA F+ +K+ F+AL Y
Sbjct: 125 QVHGVGAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFQNMKELGFVFSALSY 184
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M LY ++GQ E+V +V+ E+KR +VPD F+Y + I+S + ++ L+EM C
Sbjct: 185 NNLMGLYTNIGQHERVPMVMAEMKRDGIVPDNFSYRICINSYGIRADFFGLENTLEEMEC 244
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ DW Y + + YI +L S L +AE + ++ Y LI LY LG+K
Sbjct: 245 EPQIVVDWNTYAVVASNYIKG-YLREKAYSALRKAEAKMDKKDGDAYGHLISLYGHLGDK 303
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + ++ +++Y +L+ + L + E +++ +W +S+ + FD N
Sbjct: 304 LEVKRLWALHMLNCKRYINKDYTNMLAVLVKLDEITEAEDLLKEW-ESSKNAFDFQVPNV 362
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
LL + GL +KA L+K PT+ S
Sbjct: 363 LLTGYRQKGLLDKAETLLDGFLKKGKTPTSTS 394
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 142/255 (55%), Gaps = 4/255 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI + E YF GLP K +TY ALL+ Y AK +KA +++ ++ + +S + L
Sbjct: 136 KVRGIEAAELYFAGLPDPGKNHKTYGALLNCYCSAKMEDKATDIYRKMDELGISSSTLPI 195
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M+LY+ +GQ KV + EE+K KNV PD T L +SS AA ID V + L EM
Sbjct: 196 NNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSSYAALNKIDTVGEVLKEME- 254
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGN 181
+ + W Y L ++Y+ A+ + AES+ L + E I Q +DFL+ LYA +GN
Sbjct: 255 EKKVALGWSAYSTLASLYVNANMVEEAESA-LKKLESLIDVQAGRQPFDFLMSLYASVGN 313
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+++++W ++ QK+T+ +Y+ +L + L + +I + W +S ++D N
Sbjct: 314 LSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDDRMKQIYEDW-ESNYENYDARLTN 372
Query: 242 RLLGAFSDVGLTEKA 256
+ A GLT++A
Sbjct: 373 MMTRAHLRNGLTKEA 387
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G E Y++ L +A LLH Y + +KAE ++ L +
Sbjct: 120 IAKVHGTCHAEEYYKKLRNAACREAASFPLLHCYVAERNVQKAESFMASLQSIGLPVDPH 179
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NEM+ LY++ Q EK V++ +KR N+ ++ +YNLW+++C + L + V+ EM
Sbjct: 180 SFNEMLKLYVATCQFEKALAVIDLMKRSNIPRNVLSYNLWMNAC-SVLGVASVQSVFKEM 238
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAES-STLVEAEKSITQRQWITYDFLIILYAGL 179
D W + L NI+I H +N+++ + L AE ++ RQ + Y F++ YA L
Sbjct: 239 VNDGTVEVGWSTFCTLANIFI--KHGLNSKALACLRTAETKLSPRQRLGYSFVMTCYARL 296
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
+ D + ++W++ + ++ S NY+ + + +G + + I W+ D+
Sbjct: 297 DDSDGVMRLWEASKSVPGRIPSANYMSTIICSIKVGDIAQAEWIFGSWEAECGRKNDVRV 356
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA+ G EKA H+ +L+K P
Sbjct: 357 SNVLLGAYVRNGWIEKAERLHLHMLEKGAHP 387
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 2/256 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G S E YF+ L KT++TY ALL+ Y + T+KA +++K + + L
Sbjct: 99 IGKVHGFSSAETYFDALKDQHKTNKTYGALLNCYVRQRQTDKALSHLQKMKDLGFASSPL 158
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN++M LY ++GQ EKV V+ E+K+ V+PD F+Y + I+S + V++ L EM
Sbjct: 159 TYNDIMCLYTNIGQHEKVPDVLREMKQNQVLPDNFSYRICINSYGVRSDFGGVERVLKEM 218
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
DW Y N YI A L L ++E+ + + Y+ LI LYA LG
Sbjct: 219 ETQPNIVMDWNTYSIAANFYIKAG-LTRDAVCALRKSEERLDNKDGQGYNHLISLYAQLG 277
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ +IW + ++ +R++ +L S + LG L E +I+ +W +S+ + +D
Sbjct: 278 LKNEVMRIWDLEKNACKRCINRDFTTLLESLVKLGELDEAEKILKEW-ESSDNCYDFGIP 336
Query: 241 NRLLGAFSDVGLTEKA 256
+ ++ +S GL EKA
Sbjct: 337 SIVIIGYSQKGLHEKA 352
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 143/272 (52%), Gaps = 2/272 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI E++F LP + K Y +LL+ Y AK EKAE L ++ + + L +
Sbjct: 147 KVRGISDAEQFFLTLPENFKDRRVYGSLLNAYVRAKSREKAEALLHTMRDKGYALHPLPF 206
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N MMTLYM++ + +KV +V E+K+K++ DI++YN+W+SSC + ++++++ +M
Sbjct: 207 NVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKS 266
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
D + +W + + +YI AE + L + E IT R I Y +L+ LY +GNK
Sbjct: 267 DVSINPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGRNRIPYHYLLSLYGSVGNK 325
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + + + Y ++SS +G ++ ++ ++W S +D N
Sbjct: 326 KELYRVWNVYKSVVPSIPNLGYHALVSSLARMGDIEGAEKVYEEW-LPVKSSYDPRIPNL 384
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
L+ + EKA +++ P++++
Sbjct: 385 LMNVYVKNDQLEKAEGLFDHMVEMGGKPSSST 416
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 146/271 (53%), Gaps = 3/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 59
+ K G+ + E YF L SAK + TY AL++ Y KA+ FE++ + N N+
Sbjct: 135 IAKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKAKAHFEKMDELNFVNNS 194
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L +N MM++YM + Q EKV ++V+ +K++ + P TY++W+ SC + ++D ++K +DE
Sbjct: 195 LPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDE 254
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M DS W + NL I+ A AES+ L EK + ++ FLI LYAG+
Sbjct: 255 MGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESA-LKSMEKKMNPNNRDSHHFLISLYAGI 313
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
++ ++W+SL+ + ++ + +Y+ +L + LG + + +I +W +S +D+
Sbjct: 314 SKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKIFTEW-ESKCWAYDMRL 372
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N + + + E+A + ++K+ P
Sbjct: 373 ANIAINTYLKGNMYEEAEKILDGAMEKSKGP 403
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 144/269 (53%), Gaps = 3/269 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
K G+ + E YF L SAK + TY AL++ Y EKA+ FE + + N N+L
Sbjct: 150 KTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLP 209
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N MM++YM + Q EKV ++V+ IK++ + P TY++W+ SC + ++D ++K +DEM
Sbjct: 210 FNNMMSMYMRLSQPEKVPVLVDAIKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMG 269
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
DS W + NL IY T + L S L E+ + ++ FL+ LYAG+
Sbjct: 270 KDSEAKTTWNTFSNLAAIY-TKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISK 328
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
++ ++W+SL+ + ++ + +Y+ +L + LG L + +I +W +S +D+ N
Sbjct: 329 GPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEW-ESKCWAYDMRLAN 387
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + + E+A + ++K+ P
Sbjct: 388 IAINTYLKGNMYEEAEKILDGAMKKSKGP 416
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 142/272 (52%), Gaps = 2/272 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI E +F LP + K Y +LL+ Y AK EKAE L ++ + + L +
Sbjct: 148 KVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPF 207
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N MMTLYM++ + +KV +V E+K+K++ DI++YN+W+SSC + ++++++ +M
Sbjct: 208 NVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKS 267
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
D +W + + +YI AE + L + E IT R I Y +L+ LY LGNK
Sbjct: 268 DVSIYPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGRNRIPYHYLLSLYGSLGNK 326
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + + + Y ++SS + +G ++ ++ ++W S +D N
Sbjct: 327 KELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEW-LPVKSSYDPRIPNL 385
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
L+ A+ E A +++ P++++
Sbjct: 386 LMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 417
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 131/256 (51%), Gaps = 2/256 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K G+ + E YF L S K TY +LL+ Y K +KA+ FE + N N+L
Sbjct: 115 IAKTKGLEAAETYFNSLNDSIKNQSTYGSLLNCYCVEKEEDKAKAHFENMVDLNHVSNSL 174
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M +Y+ +GQ EKV +V +K+KN+ P TY++WI SC + ++D V+K LDEM
Sbjct: 175 PFNNLMAMYLRIGQSEKVPALVVAMKQKNITPCDITYSMWIQSCGSLKDLDGVEKVLDEM 234
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ G W + NL IYI AE + L E + Y FLI LYAG+
Sbjct: 235 KAEGEGISSWDTFANLAAIYIKVGLYDKAEEA-LKSLENKMNPHIRDCYHFLISLYAGIA 293
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ ++W L+ + + +Y+ +L + L + + +I +W +S +D+
Sbjct: 294 NASEVYRVWDLLKKRHPNVNNSSYLTMLQALSKLNDIDGIKKIFTEW-ESTCWTYDMRMA 352
Query: 241 NRLLGAFSDVGLTEKA 256
N + ++ + E+A
Sbjct: 353 NVAISSYLKQNMYEEA 368
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 142/272 (52%), Gaps = 2/272 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI E +F LP + K Y +LL+ Y AK EKAE L ++ + + L +
Sbjct: 148 KVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPF 207
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N MMTLYM++ + +KV +V E+K+K++ DI++YN+W+SSC + ++++++ +M
Sbjct: 208 NVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKS 267
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
D +W + + +YI AE + L + E IT R I Y +L+ LY LGNK
Sbjct: 268 DVSIYPNWTTFSTMATMYIKMGETEKAEDA-LRKVEARITGRNRIPYHYLLSLYGSLGNK 326
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + + + Y ++SS + +G ++ ++ ++W S +D N
Sbjct: 327 KELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEW-LPVKSSYDPRIPNL 385
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
L+ A+ E A +++ P++++
Sbjct: 386 LMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 417
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 144/269 (53%), Gaps = 3/269 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
K G+ + E YF L SAK + TY AL++ Y EKA+ FE + + N N+L
Sbjct: 150 KTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLP 209
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N MM++YM + Q EKV ++V+ +K++ + P TY++W+ SC + ++D ++K +DEM
Sbjct: 210 FNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMG 269
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
DS W + NL IY T + L S L E+ + ++ FL+ LYAG+
Sbjct: 270 KDSEAKTTWNTFSNLAAIY-TKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISK 328
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
++ ++W+SL+ + ++ + +Y+ +L + LG L + +I +W +S +D+ N
Sbjct: 329 GPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEW-ESKCWAYDMRLAN 387
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + + E+A + ++K+ P
Sbjct: 388 IAINTYLKGNMYEEAEKILDGAMKKSKGP 416
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 8/269 (2%)
Query: 6 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
G+ E YF LP SA LL Y + T KAE ++ + L + +NEM
Sbjct: 113 GLMEAEEYFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKLYELGLVVSPHPFNEM 172
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN--IDQVKKFLDEMSCD 123
M LY+ + KV LV++++KR + ++ +YNLW+++C+ + V+ +M D
Sbjct: 173 MKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMNACSEEEGYVVAAVETVFRQMLND 232
Query: 124 SGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLIILYAGLGN 181
W L N Y A ++ + LV +AEK ++ + + FLI LYA L +
Sbjct: 233 RNVEVGWGSLATLANAYKKAGQ---SKKAILVLKDAEKKLSTCNRLGHFFLITLYASLKD 289
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K+ + ++W++ + + +++ NYICIL+ + LG + + I +W +S +DI N
Sbjct: 290 KEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEW-ESNCQKYDIRVSN 348
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
LLGA+ GL E+A H+ LQK P
Sbjct: 349 VLLGAYVRNGLMEEAESLHLHTLQKGGCP 377
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 140/257 (54%), Gaps = 8/257 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV G+ + E YF LP AK TY +LL Y AK EKA L+ ++ + + + L
Sbjct: 129 KVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKMEEKATNLYRQMDELGIWSSTLPI 188
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M+LYM + Q KV + EE+K KNV P+ T + ++S AA ID +++ L EM
Sbjct: 189 NNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILMTSYAALNKIDDIEELLKEM-V 247
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT---QRQWITYDFLIILYAGL 179
+ + W Y L +IY+ A AES+ L + E I+ RQ +DFL+ LYA L
Sbjct: 248 EKDVTLGWSAYSTLASIYVNAGQFGKAESA-LKKLEGLISAHDDRQ--PFDFLLSLYASL 304
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GN +++++W ++ K+T+ +Y+ +L + L + + +I +W +S FD+
Sbjct: 305 GNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDIDRMKQIYMEW-ESNYETFDVKL 363
Query: 240 CNRLLGAFSDVGLTEKA 256
N ++ + VG+TE+A
Sbjct: 364 TNMMIRSHLKVGMTEEA 380
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 142/267 (53%), Gaps = 4/267 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E++FE +P+ + Y ALL+ YA K KAE++F+ +K+ L
Sbjct: 117 IAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCL 176
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+ LY+ G+ V ++ E++ V PDIFT N + + +A +++ ++KFL
Sbjct: 177 PYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDIFTVNTRLHAYSAVSDVEGMEKFLMRC 236
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGL 179
D+G DW Y + N YI A L L ++E+ + R+ Y+ L+ Y
Sbjct: 237 EADTGLHLDWRTYADTANGYIKAG-LTEKAIEMLRKSEQMVNPRKRKHAYEVLMSFYGAA 295
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G K+++ ++W SL + YI ++S+ L + ++EV +I+++W ++ S FDI
Sbjct: 296 GKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEW-EAGHSLFDIRI 353
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQK 266
+ L+ + G+ EKA E +L+QK
Sbjct: 354 PHLLITGYCKKGMMEKAEEVVNMLVQK 380
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 133/270 (49%), Gaps = 8/270 (2%)
Query: 5 FGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ + E YF LP SA LL Y + T KAE ++ + L + +NE
Sbjct: 137 YDLMEAEEYFMNLPDSAAKKAACLTLLRGYIRVRDTNKAETFMVKLYELGLVLSPHPFNE 196
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT--LNIDQVKKFLDEMSC 122
MM LY++ + KV LV++++KR V ++ +YNLW+++C + V+ +M
Sbjct: 197 MMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNLWMNACTEEEGYGVAAVETVFRQMQN 256
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLIILYAGLG 180
D W L N Y A ++ + LV +AE+ ++ + Y FLI LYA L
Sbjct: 257 DRNVEVGWSSLATLANAYKKAGQ---SKKAILVLKDAERKLSTCNRLGYFFLITLYASLK 313
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+ + ++W++ + +++ NYICIL + LG + + I +W +S +DI
Sbjct: 314 EKEGVLRLWEASKAVGGRISCANYICILICLVKLGDIVQAKRIFLEW-ESNCQKYDIRVS 372
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA++ G E+A H+ LQK P
Sbjct: 373 NVLLGAYARNGSMEEAESLHLHTLQKGGCP 402
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 140/263 (53%), Gaps = 4/263 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ +V G+ S E +F L K TY ALL+ Y ++ EKAE L E ++ ++L
Sbjct: 322 IARVHGVSSAESFFLNLTNDLKDKRTYGALLNAYVHSRSREKAESLLEVMRSKRYLTHSL 381
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MMTL M++ +KV ++V E+K KN+ DI+TYN+W+SSC + +I+++++ ++M
Sbjct: 382 PFNLMMTLSMNLKDYDKVDMLVSEMKEKNIQLDIYTYNIWLSSCGSQGSIEKMEQVFEQM 441
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D +W + + +YI L L +AE I R + + +L+ LY +G
Sbjct: 442 LKDPTIIPNWSTFSTMAAMYIKM-ELFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVG 500
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
NKD++ ++W + + + + Y ++SS++ + ++ ++ ++W SD D
Sbjct: 501 NKDEVYRVWNNYKSMFPSIPNLGYHAVISSFVRMDDIERAEKLYEEWVSVRPSD-DSRIG 559
Query: 241 NRLLGAFSDVGLTEKANEF--HM 261
N L+ + G ++K F HM
Sbjct: 560 NLLISWYLKKGKSDKVFSFFKHM 582
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 142/267 (53%), Gaps = 4/267 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E++FE +P+ + Y ALL+ YA K KAE++F+ +K+ L
Sbjct: 21 IAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCL 80
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+ LY+ G+ V ++ E++ + V PDIFT N + + + +++ ++KFL
Sbjct: 81 PYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRC 140
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGL 179
D G DW Y + N YI A L L ++E+ + Q++ Y+ L+ Y
Sbjct: 141 EADQGLHLDWRTYADTANGYIKAG-LTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAA 199
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G K+++ ++W SL + YI ++S+ L + ++EV +I+++W ++ S FDI
Sbjct: 200 GKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEW-EAGHSLFDIRI 257
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQK 266
+ L+ + G+ EKA E +L+QK
Sbjct: 258 PHLLITGYCKKGMMEKAEEVVNILVQK 284
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 142/267 (53%), Gaps = 4/267 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E++FE +P+ + Y ALL+ YA K KAE++F+ +K+ L
Sbjct: 116 IAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCL 175
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+ LY+ G+ V ++ E++ + V PDIFT N + + + +++ ++KFL
Sbjct: 176 PYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRC 235
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGL 179
D G DW Y + N YI A L L ++E+ + Q++ Y+ L+ Y
Sbjct: 236 EADQGLHLDWRTYADTANGYIKAG-LTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAA 294
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G K+++ ++W SL + YI ++S+ L + ++EV +I+++W ++ S FDI
Sbjct: 295 GKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEW-EAGHSLFDIRI 352
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQK 266
+ L+ + G+ EKA E +L+QK
Sbjct: 353 PHLLITGYCKKGMMEKAEEVVNILVQK 379
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 143/275 (52%), Gaps = 4/275 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ ++ G + E YF LP KT + Y ALL+ Y EK+ F+++K+ F+ L
Sbjct: 21 IGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKELGFVFSTL 80
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S + ++ L+EM
Sbjct: 81 PYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEM 140
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
C+ DW Y + + YI + + S L +AE I + +Y+ LI LY LG
Sbjct: 141 ECEPKIVVDWNTYAVVASNYIKGN-IREKAFSALKKAEAKINIKDSDSYNHLISLYGHLG 199
Query: 181 NKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
+K +++++W +L+M+ + +++Y +L+ + L ++E ++ +W+ S + FD
Sbjct: 200 DKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGNA-FDFQV 257
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N LL + L +KA L+K P + S
Sbjct: 258 PNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 292
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 143/275 (52%), Gaps = 4/275 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ ++ G + E YF LP KT + Y ALL+ Y EK+ F+++K+ F+ L
Sbjct: 127 IGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKELGFVFSTL 186
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S + ++ L+EM
Sbjct: 187 PYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEM 246
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
C+ DW Y + + YI + + S L +AE I + +Y+ LI LY LG
Sbjct: 247 ECEPKIVVDWNTYAVVASNYIKGN-IREKAFSALKKAEAKINIKDSDSYNHLISLYGHLG 305
Query: 181 NKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
+K +++++W +L+M+ + +++Y +L+ + L ++E ++ +W+ S + FD
Sbjct: 306 DKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGNA-FDFQV 363
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N LL + L +KA L+K P + S
Sbjct: 364 PNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 398
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K + E Y+ L A LLH Y + +KAE +++ L +
Sbjct: 132 IAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSHGLPVDPH 191
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NE+M LY++ Q EKV V++ +KR N+ ++ +YNLW+++CA +D V+ M
Sbjct: 192 SFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQSVFQVM 251
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D W Y L NI+ + L N + LV+AE ++ + Y F++ YA L
Sbjct: 252 LNDETVKVGWSTYCTLANIF-RKNGLNNEAQACLVKAEAKLSPAGRLGYSFVMTCYAALN 310
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+ D + ++W++ + ++ + Y+ +S + +G + + I +W ++ D+
Sbjct: 311 DSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKW-EAGCRKHDVRVS 369
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA+ EKA H+ +L+K P
Sbjct: 370 NVLLGAYVRNRWIEKAERLHLHMLEKGACP 399
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 143/275 (52%), Gaps = 4/275 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ ++ G + E YF LP KT + Y ALL+ Y EK+ F+++K+ F+ L
Sbjct: 142 IGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELLVEKSLAHFQKMKELGFVFSTL 201
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +M LY ++GQ EKV V+ E+K +VPD F+Y + I+S + ++ L+EM
Sbjct: 202 PYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEM 261
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
C+ DW Y + + YI + + S L +AE I + +Y+ LI LY LG
Sbjct: 262 ECEPKIVVDWNTYAVVASNYIKGN-IREKAFSALKKAEAKINIKDSDSYNHLISLYGHLG 320
Query: 181 NKDKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
+K +++++W +L+M+ + +++Y +L+ + L ++E ++ +W+ S + FD
Sbjct: 321 DKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIEEAEVLLKEWESSGNA-FDFQV 378
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N LL + L +KA L+K P + S
Sbjct: 379 PNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 413
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLS 56
+ K G+ E YFE L S+ + Y LL Y K ++ E E++
Sbjct: 113 IIKTHGLKQAEEYFEKLLNSSASLRVAKSAYLPLLRSYVKKKMVKEGEVFMEKLNGLGFL 172
Query: 57 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 116
+NEMM LY + GQ EKV +VV +K + ++ +YNLW+++C + V+
Sbjct: 173 VTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVLSYNLWMNACCQVSGVTAVETV 232
Query: 117 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLII 174
EM D W L N+YI E + LV AEK + + + Y FLI
Sbjct: 233 YREMVGDKSVEVGWSSLCTLANVYIKGGF---DEKAKLVLENAEKLLNRSNRLGYFFLIT 289
Query: 175 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 234
LYA LG+K+ + ++W++ ++ +++ NYIC+LSS + +G L+E + ++W ++ +
Sbjct: 290 LYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKIGDLEEAERVFNEW-EAQCFN 348
Query: 235 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+D+ N LLGA+ G KA H +L++ P
Sbjct: 349 YDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNP 384
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
++ G+ + E YF L KT + Y ALL+ Y +KA F +K+ F+ L Y
Sbjct: 23 QIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFRNMKELGFVFSTLPY 82
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N++M LY +GQ E+V V+ E+K +VPD F+Y + I+S + ++ L+EM C
Sbjct: 83 NDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMEC 142
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ DW Y + + YI L S L +AE + ++ Y LI LY LG+K
Sbjct: 143 EPQIVVDWNTYAVVASNYIKGD-LREKAYSALSKAEAKLDKQDPDAYRHLISLYGNLGDK 201
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
+ ++W ++ +R+Y+ +LS + L + E +++ +W+ S S FD N
Sbjct: 202 SEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQNS-FDFRVPNV 260
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
LL + L +KA L+K P + S
Sbjct: 261 LLTGYRQKALLDKAEMLLDGFLKKGKTPPSTS 292
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 144/263 (54%), Gaps = 8/263 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ E Y+ +P + ++ Y ALL+ YA + EKAE +++++ L L
Sbjct: 82 ISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEATMQKMRELGL-VQTL 140
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M++LY +G+ EK+ +V+E++ K V DI+T+N+ + + AT NI++++K L +M
Sbjct: 141 SYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVATSNIEEMEKLLMKM 200
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT----YDFLIILY 176
DS + D+ + + N Y+ A L+ L AE+ T Y+ L+ LY
Sbjct: 201 ETDSLINIDFHTFFAVANGYLKAG-LLEKSIVMLKRAEELTVPMVGTTKAHAYEMLLTLY 259
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
GNKD + ++W S + T + S YIC+++S + LG + I ++W T +D
Sbjct: 260 GSAGNKDGVYRVWNSYKNTGRIFNS-TYICMINSLMRLGDIDGAEWISEEWVSRKTL-YD 317
Query: 237 ISACNRLLGAFSDVGLTEKANEF 259
I N ++ A+S GL +KA E+
Sbjct: 318 IRIPNTMIRAYSRKGLWKKAEEY 340
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 143/260 (55%), Gaps = 4/260 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ YF +P S + E Y ALL+ YA K E+AE ++++ N L
Sbjct: 111 ISKVHGLEQAVTYFNSVPESLRGLEVYGALLNCYAHYKHLEEAEATMRKMREMGFVRNVL 170
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+ LY +G+ EK+ ++++E+++ + TY + +++ AT NI+++KK L +M
Sbjct: 171 SYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKILLNAYVATSNIEEIKKILMKM 230
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGL 179
D S DW YV N Y+ A L++ + L +E+ I+ + + L+ LY +
Sbjct: 231 EADPLVSIDWYAYVVAANGYLKAG-LIDKTLTMLWRSEQLISGKSARFACETLLSLYTAV 289
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GNK+++ ++W +L TK + + +Y+C+++S L L + I ++W S FDI
Sbjct: 290 GNKEQVYRVW-NLYKTKGRSLNSSYLCMINSLLKLDDVDGAERIWEEW-VSIVKFFDIRI 347
Query: 240 CNRLLGAFSDVGLTEKANEF 259
N ++ A+S GL EKA F
Sbjct: 348 PNVMVSAYSKKGLWEKAEAF 367
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 137/259 (52%), Gaps = 12/259 (4%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV G+ + E YF LP AK TY ALL Y AK EKA L+ ++ + L
Sbjct: 145 KVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKMEEKATYLYRQMDELGFWSGTLPI 204
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M+LYM + Q KV + EE+K KN+ PD T + ++S AA+ ID +++ L EM
Sbjct: 205 NNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILMTSYAASNKIDAIEELLKEM-V 263
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESS-----TLVEAEKSITQRQWITYDFLIILYA 177
+ S W Y L +IY+ A + AES+ L+ AE RQ +DFL+ LYA
Sbjct: 264 EKDVSLGWSAYSTLASIYVNAGQVEKAESALKKLEGLIGAEDG---RQ--PFDFLMSLYA 318
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
LGN +I+++W ++ +T+ +Y+ +L + L + + +I +W +S +D+
Sbjct: 319 SLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDIDRMKQIYMEW-ESNYQTYDV 377
Query: 238 SACNRLLGAFSDVGLTEKA 256
N ++ +G++E+A
Sbjct: 378 RLTNMMIRGHLRLGMSEEA 396
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
++ G+ + E YF L KT + Y ALL+ Y +KA F +K+ F+ L Y
Sbjct: 127 QIHGVEAAETYFNNLSDKDKTEKPYGALLNCYTRELLVDKALAHFRNMKELGFVFSTLPY 186
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N++M LY +GQ E+V V+ E+K +VPD F+Y + I+S + ++ L+EM C
Sbjct: 187 NDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMEC 246
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ DW Y + + YI L S L +AE + ++ Y LI LY LG+K
Sbjct: 247 EPQIVVDWNTYAVVASNYIKGD-LREKAYSALSKAEAKLDKQDPDAYRHLISLYGNLGDK 305
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
+ ++W ++ +R+Y+ +LS + L + E +++ +W+ S S FD N
Sbjct: 306 SEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQNS-FDFRVPNV 364
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
LL + L +KA L+K P + S
Sbjct: 365 LLTGYRQKALLDKAEMLLDGFLKKGKTPPSTS 396
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 63
+ G+ + E YF L KT + Y ALL+ Y + +KA F+++K+ F AL YN
Sbjct: 132 IHGVGAAETYFNNLSDKDKTEKPYGALLNCYTRERLVDKALAHFQKMKELGFVFTALPYN 191
Query: 64 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
+M+LY ++ Q E+V V+ E+K +VPD F+Y + I+S + ++ L+EM C+
Sbjct: 192 NLMSLYTNIEQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMECE 251
Query: 124 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 183
DW Y + + YI L S L +AE + + Y LI LY LG+K
Sbjct: 252 PQIVVDWNTYTVVASQYIKGD-LREKAYSALKKAEAKMGIKDLAAYRHLISLYGHLGDKS 310
Query: 184 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 243
++ ++W Q+ + +Y IL+ + L + E +++ +W +++ ++FD N L
Sbjct: 311 EVKRLWAVQMSNCQRHLNTDYTNILAVLVKLDEIAEAEDLLKEW-ETSKNEFDFKVPNVL 369
Query: 244 LGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
L + GL +KA L K P + S
Sbjct: 370 LTWYCQKGLLDKAEALLDGFLIKGKMPPSTS 400
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 143/273 (52%), Gaps = 4/273 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V GI + E YF LP KT + Y ALL+ Y + + F+++K+ F++L Y
Sbjct: 138 QVHGIGAAEAYFNTLPDKDKTEKPYGALLNCYTRELMVDGSLAHFQKMKELGFVFSSLPY 197
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M LY ++GQ EKV V+ E+K ++PD F+Y + I+S + ++ L++M C
Sbjct: 198 NNLMGLYTNIGQHEKVPSVIAEMKGSGIMPDNFSYRICINSYGTRADFFGMENTLEDMEC 257
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ DW Y + + YI + L S L +AE I + TY+ LI LY LG+K
Sbjct: 258 EPQIVVDWNTYAVVASNYIKGN-LREKAISALKKAEAKIDIKDSDTYNHLISLYGQLGDK 316
Query: 183 DKIDQIWKSLRMTK-QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
++ ++W L+M+ ++ +++Y +L+ + L ++E ++ +W +S+ + FD N
Sbjct: 317 SEMRRLW-GLQMSNCKRHINKDYTTMLAMLVRLDEIEEAEALLKEW-ESSENAFDFHVPN 374
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
LL + + +KA L+K P + S
Sbjct: 375 VLLTGYRHKDMLDKAEALLDDFLKKGKMPPSTS 407
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 2/256 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K G+ + E YF L S K TY +LL+ Y K KA+ FE + N N+L
Sbjct: 116 IAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSL 175
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M +YM +GQ EKV +V +K K++ P TY++WI SC + ++D V+K LDEM
Sbjct: 176 PFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEM 235
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ G W + NL IYI AE + L E ++ Y FLI LY G+
Sbjct: 236 KAEGEGIFSWNTFANLAAIYIKVGLYGKAEEA-LKSLENNMNPDVRDCYHFLINLYTGIA 294
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ ++W L+ + + +Y+ +L + L + V ++ +W +S +D+
Sbjct: 295 NASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEW-ESTCWTYDMRMA 353
Query: 241 NRLLGAFSDVGLTEKA 256
N + ++ + E+A
Sbjct: 354 NVAISSYLKQNMYEEA 369
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 2/256 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K G+ + E YF L S K TY +LL+ Y K KA+ FE + N N+L
Sbjct: 117 IAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSL 176
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +M +YM +GQ EKV +V +K K++ P TY++WI SC + ++D V+K LDEM
Sbjct: 177 PFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEM 236
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ G W + NL IYI AE + L E ++ Y FLI LY G+
Sbjct: 237 KAEGEGIFSWNTFANLAAIYIKVGLYGKAEEA-LKSLENNMNPDVRDCYHFLINLYTGIA 295
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ ++W L+ + + +Y+ +L + L + V ++ +W +S +D+
Sbjct: 296 NASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEW-ESTCWTYDMRMA 354
Query: 241 NRLLGAFSDVGLTEKA 256
N + ++ + E+A
Sbjct: 355 NVAISSYLKQNMYEEA 370
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G E Y+ L +A LLH Y + +KAE +++ L +
Sbjct: 127 IAKVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPH 186
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NE+M LY++ Q EKV V+ +KR N+ ++ +YN+W+++CA + V+ EM
Sbjct: 187 SFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEM 246
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D W Y L NI+ A + L AE ++ + Y F++ YA L
Sbjct: 247 LNDDMVEVGWSTYCTLANIFKKYGQSSKA-LACLRTAETKLSSTGRLGYSFIMTCYAALN 305
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++D + ++W++ ++ ++ + NY+ + + +G + W ++ + D+
Sbjct: 306 DRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSW-EAESKKHDVRVS 364
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA+ G EKA H+ +L+K P
Sbjct: 365 NVLLGAYVRNGWIEKAERLHLHMLEKGAHP 394
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G E Y+ L +A LLH Y + +KAE +++ L +
Sbjct: 127 IAKVHGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPH 186
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NE+M LY++ Q EKV V+ +KR N+ ++ +YN+W+++CA + V+ EM
Sbjct: 187 SFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEM 246
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D W Y L NI+ A + L AE ++ + Y F++ YA L
Sbjct: 247 LNDDMVEVGWSTYCTLANIFKKYGQSSKA-LACLRTAETKLSSTGRLGYSFIMTCYAALN 305
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++D + ++W++ ++ ++ + NY+ + + +G + W ++ + D+
Sbjct: 306 DRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSW-EAESKKHDVRVS 364
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA+ G EKA H+ +L+K P
Sbjct: 365 NVLLGAYVRNGWIEKAERLHLHMLEKGAHP 394
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 136/256 (53%), Gaps = 4/256 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K+ GIH+ E YF LP ++ +TY+ LL+ YA + EK EL+E +K N+ + L
Sbjct: 117 VSKLNGIHAAEEYFGSLPDIFRSKQTYSTLLNCYAEHRMAEKGLELYENMKAMNIVSDIL 176
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YN +M LY+ Q EK+ V +++ + P+ F+Y + S +I+ +K L E+
Sbjct: 177 VYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESAEKVLKEL 236
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
S W Y L N Y AE TL +AE+ + + ++ L+ YA G
Sbjct: 237 Q--EVNSVPWSLYATLANGYNKLQQFDKAE-FTLKKAEEVLDKHDVFSWHCLLSHYANSG 293
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ +IW+SL+ +K T+R+Y+ +L + L + +I +W +S+ +D+
Sbjct: 294 NLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDTLQQIFQEW-ESSHEHYDMKIP 352
Query: 241 NRLLGAFSDVGLTEKA 256
N ++ A+ D G+ +KA
Sbjct: 353 NIIIQAYLDKGMVDKA 368
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K +G E Y+ L A LLH Y + +KAE +++ L +
Sbjct: 134 IAKAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSCGLPVDPH 193
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NE+M LY++ Q EK V++ +KR N+ ++ +YNLW++ CA + V+ EM
Sbjct: 194 SFNEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPVQSVFQEM 253
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D W Y L NI+ + L + L +AE ++ + Y F++ YA L
Sbjct: 254 LNDETVEVGWSTYCTLANIF-RKNGLNTKAQACLRKAETKLSPTGRLGYSFVMTCYAALN 312
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+ D + ++W++ + ++ + NY+ + + +G + + I W ++ D+
Sbjct: 313 DSDGVMRLWEASKSVPGRIPAANYMTAMLCSIKVGDISQAEWIFGSW-EAGCRKHDVRVS 371
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LLGA+ EKA H+ +L+K P
Sbjct: 372 NVLLGAYVRNRWIEKAERLHLHMLEKGARP 401
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 139/271 (51%), Gaps = 3/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV GI ++ F P K + Y+ALL+ YA AK EKAE + + +K + L
Sbjct: 137 ISKVHGIEQAQKLFNNTPQHLKVLKVYSALLNCYAKAKLVEKAESVVQEMKSLGFANTLL 196
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YN ++ Y G +K+ +++E+++ + D F +++ +S+ A+ +I ++K L +M
Sbjct: 197 VYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHSIQLSAYASVSDIVGIEKTLAKM 256
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGL 179
D DW Y YI LV+ L ++E+ +T +R+ YD LI LYA
Sbjct: 257 ESDPNVFLDWTSYTAAAKGYIKVG-LVDKALEMLEKSERLVTGKRRGTAYDSLITLYAAT 315
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G +++ +IW+ L +K+ YI I++S L L + +I ++W+ S +DI
Sbjct: 316 GKTNEVLRIWE-LYKKNEKVYKEAYISIITSLLKLDDFENAEKIFEEWEFQNHSCYDIHI 374
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+ A+S GL EKA + K P
Sbjct: 375 PNFLIDAYSRKGLVEKAETLIDRAISKGGEP 405
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 138/272 (50%), Gaps = 2/272 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V+G + E YFE L K +TY ALL+ Y + EK+ FE++K+ ++L Y
Sbjct: 105 RVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTY 164
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M LY ++GQ EKV V+EE+K +NV PD ++Y + I++ A +++++ L +M
Sbjct: 165 NNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMER 224
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ DW Y YI A L +E + ++ Y+ LI LYA LG K
Sbjct: 225 RQDITMDWNTYAVAAKFYIDGGDCDRA-VELLKMSENRLEKKDGEGYNHLITLYARLGKK 283
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + ++ +++Y+ +L S + + L E E++ +WK S +D N
Sbjct: 284 IEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNC-YDFRVPNT 342
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++ + + EKA L ++ A T S
Sbjct: 343 VIRGYIGKSMEEKAEAMLEDLARRGKATTPES 374
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 131/254 (51%), Gaps = 2/254 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G ++ E YF L + +T+ ALL+ Y + +K+ +++K+ + ++L Y
Sbjct: 108 RVHGFYAAETYFNSLKDIERNEKTHGALLNCYVRQRQVDKSLSHLKKMKELGFALSSLTY 167
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M LY ++GQ EKV+ V E+K +V+PD F+Y + I S +ID + L EM
Sbjct: 168 NNIMCLYTNIGQHEKVSDVFNEMKENHVLPDNFSYRICIGSYGVRSDIDGMNAILKEMES 227
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
DW Y + N YI A L + L + EK + + Y+ LI LYA LG K
Sbjct: 228 QPHIVMDWNTYSVVANFYIKAE-LSSEAIDALRKCEKRLDDKDGEGYNHLISLYARLGKK 286
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
+++ ++W + ++ +R++I +L S + L E +I+ +W+ S +D N
Sbjct: 287 NEVLRLWDMEKSACKRCLNRDFITMLESLVKLEEFDEADKILKEWEFSGNC-YDYGVPNV 345
Query: 243 LLGAFSDVGLTEKA 256
++ +S+ EKA
Sbjct: 346 VVVGYSEKDFPEKA 359
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 140/258 (54%), Gaps = 6/258 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ +V G+ E YF+ +P K + + ALL+ YA K +KA +++K+ + + L
Sbjct: 107 ILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPL 166
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN MM LY +G+ E++ +++E+K + V D FTY++ IS+ AA + ++K +++M
Sbjct: 167 PYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQM 226
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI--TQRQWITYDFLIILYAG 178
+ DW YV N Y L++ S L ++E + +++ ++ + LYA
Sbjct: 227 ESNPSIVLDWNCYVIAANAY-NKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYAR 285
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
G KD+I +IW + K+K+ ++ +I +++S L+L +K I +W+ S +D+
Sbjct: 286 NGKKDEIHRIWNLYK--KEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLS-YDLR 342
Query: 239 ACNRLLGAFSDVGLTEKA 256
N L+ A+ GL EKA
Sbjct: 343 IPNLLVDAYCRAGLMEKA 360
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 139/267 (52%), Gaps = 10/267 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV GI E YF +P K E+Y ALL+ YA K EKAE + +R+++ + L
Sbjct: 124 ISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAEAVMQRMRELGFARKPL 183
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ M+ LY G EK+ ++ E++ + D F Y + +SS AA + + ++K L +
Sbjct: 184 VFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGLEKTLKRI 243
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGL 179
D DW Y + N Y + L++ L E+ IT +R+ YD+L+ YA
Sbjct: 244 ESDPNVVLDWATYATVANGY-SKVGLLDKALEMLKRCERLITGERRSTPYDYLMTQYATT 302
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G K+ + ++W+ + K+ + +R I +++S L L+ +I ++W+ D DI
Sbjct: 303 GTKEDVLRVWE---LHKRYVGNRKNISVITSLLKFDDLESAEKIFEEWESQKLCD-DIII 358
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQK 266
N L+ A+S GL EKA +LLQ+
Sbjct: 359 PNFLVDAYSRKGLLEKAE----MLLQR 381
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 129/233 (55%), Gaps = 3/233 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K G+ + E +F GLP AK TY ALL+ Y +KA F+ + + N L
Sbjct: 105 VSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYVTN-L 163
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +MTL+M +G+ +KV +VE +K++ + FTY++W++SCA++ ++ ++ +EM
Sbjct: 164 AFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEM 223
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
++ G W Y NL +IY+ AE L E+ + +Q Y L+ LYAG G
Sbjct: 224 KTENEGQIGWHTYSNLASIYVKFKDFEKAE-MMLKMLEEQVKPKQRDAYHCLLGLYAGTG 282
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
N ++ ++W SL+ + +T+ +Y+ +LS+ L ++ + + +W+ S S
Sbjct: 283 NLGEVHRVWDSLK-SVSPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVS 334
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 138/272 (50%), Gaps = 4/272 (1%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 63
+ G+ + E YF L KT + Y ALL+ Y +KA F+++K+ F L Y+
Sbjct: 132 IHGVGAAETYFNNLSDKDKTEKPYGALLYCYTRECLVDKALAHFQKMKELGFVFTPLPYS 191
Query: 64 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
+M LY +V Q E+V V+ E+K +VP+ F+YN+ I++ + ++ L+EM
Sbjct: 192 NLMILYANVEQHERVPSVMAEMKSNGIVPNNFSYNICINAYGTRADFSGLENTLEEMEFA 251
Query: 124 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 183
S DW Y ++ + YI L S L +AE + ++ Y LI LY LG+K
Sbjct: 252 SQVVVDWRTYADVASHYIKGD-LREKAYSALQKAEAKMDEKDSFAYSHLISLYGHLGDKS 310
Query: 184 KIDQIWKSLRMTKQK-MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
+I ++W L+M K K ++ Y +L+ + L + E +++ +W +S+ ++FD N
Sbjct: 311 EIKRLW-VLQMLKCKGCINKGYKYMLTVLVKLDEIAEAEDLLKKW-ESSKNEFDFKVPNI 368
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
LL + GL +KA L+K P+ S
Sbjct: 369 LLKGYCQWGLLDKAEALLDGFLRKGKKPSATS 400
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 135/254 (53%), Gaps = 2/254 (0%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V+G + E YFE L K +TY ALL+ Y + EK+ F+++K+ ++L Y
Sbjct: 105 RVYGFVTAEEYFENLKEQYKNEKTYGALLNCYVRQQNVEKSLLHFQKMKEMGFVSSSLTY 164
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M LY ++GQ EKV V++E+K +NV PD +++ + I++ A +++++ L +M
Sbjct: 165 NNIMCLYTNIGQHEKVPGVLDEMKEENVAPDNYSFRICINAFGAMSDLERIGGILRDMER 224
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ DW Y YI A L +E + ++ Y+ LI LYA LGNK
Sbjct: 225 RPDFTMDWNTYAVAAKFYIDGGDCDRA-VELLKMSEYRLEKKDGEGYNHLITLYARLGNK 283
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W+ + ++ +++Y+ +L S + + LKE ++ +W+ S +D N
Sbjct: 284 IEVLRLWELEKEACKRRINQDYLTVLQSLMKIDGLKEAEVVLTEWESSGNC-YDFRVPNT 342
Query: 243 LLGAFSDVGLTEKA 256
++ ++ + EKA
Sbjct: 343 VIRGYTGKSMEEKA 356
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 129/233 (55%), Gaps = 3/233 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K G+ + E +F GLP AK TY ALL+ Y +KA F+ + + N L
Sbjct: 105 VSKTKGVDAAENFFGGLPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYVTN-L 163
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N +MTL+M +G+ +KV +VE +K++ + FTY++W++SCA++ ++ ++ +EM
Sbjct: 164 AFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEM 223
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
++ G W Y NL +IY+ AE L E+ + +Q Y L+ LYAG G
Sbjct: 224 KTENEGQIGWHTYSNLASIYVKFKDFEKAE-MMLKMLEEQVKPKQRDAYHCLLGLYAGTG 282
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
N ++ ++W SL+ + +T+ +Y+ +LS+ L ++ + + +W+ S S
Sbjct: 283 NLGEVHRVWDSLK-SVSPVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVS 334
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 133/256 (51%), Gaps = 7/256 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALM 61
+V G+ S ERY + L KT + + ALL+ Y +K+ L +++K +SF L
Sbjct: 111 RVHGVESAERYLQSLSDGDKTWKVHGALLNCYVREGLVDKSLSLMQKMKDMGFVSF--LN 168
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN +M+LY Q EKV V+E++K+ V P+IF+Y + I+S ++ V+K L+EM
Sbjct: 169 YNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSYRICINSYCVRGDLANVEKLLEEME 228
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+ DW+ Y + N YI A A L++ EK + + Y+ LI A L +
Sbjct: 229 REPHIGIDWITYSMVTNFYIKADMREKA-LVCLMKCEKKTHRGNTVAYNHLISHNAALRS 287
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA-TSDFDISAC 240
K + + WK + +K +R YI +L + LG L + +++ +W+ S T DF +
Sbjct: 288 KGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELDKAEKVLGEWELSGNTCDFRVP-- 345
Query: 241 NRLLGAFSDVGLTEKA 256
N LL + GL EKA
Sbjct: 346 NILLIGYCQRGLVEKA 361
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 10/260 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ YF+ +P + + Y +LL YA A+ EKAEELFE ++ ++ N+
Sbjct: 90 ISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMRGMGMA-NSY 148
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN MM LY +GQVE+V + + ++ +VPDIFT + +S+ A +++ ++K L++
Sbjct: 149 AYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKVLEKA 208
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ--WITYDFLIILYAG 178
SC++ S W + + +++ A A + E+EK IT R+ + Y FL+ +YA
Sbjct: 209 SCNNLMS--WHSFAIVGKVFMKAGMQERALQA-FQESEKRITARKDGRVAYGFLLTMYAD 265
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
L ++D+IW R +K ++ N Y+C +S L + + + ++W +S D
Sbjct: 266 LQMDSEVDRIWDVYR-SKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEW-ESKHVYHD 323
Query: 237 ISACNRLLGAFSDVGLTEKA 256
N LL A+ GL EKA
Sbjct: 324 SRLINILLTAYCKEGLMEKA 343
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 142/271 (52%), Gaps = 11/271 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ E +F P AK TY +LL+ Y +KA F+++ + +L
Sbjct: 167 VSKVKGVVEAENHFNSFPPPAKNKYTYGSLLNCYCKELMLDKALSHFDKMDEFGY-LTSL 225
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ +M++YM + Q KV +V +K + + FTY LW++SCAA ++ +V++ +EM
Sbjct: 226 SFTNLMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYILWMNSCAALNDLGEVERVYEEM 285
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ DW Y NL IYI A AE L + E + RQ TY FL+ LYAG G
Sbjct: 286 KREDEDKIDWKTYSNLAAIYIKAGFFEKAE-LMLKKVEGVMKPRQRETYHFLLSLYAGTG 344
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ ++W +L+ +T+R+Y+ +LS+ L ++ + ++ +W+ +S
Sbjct: 345 NVKEVYRVWGTLKKI-TPVTNRSYLIMLSNLRRLNDMEGIIKLFKEWESR-----HVSYD 398
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQ---KNC 268
+RL+G L++ ++ +L+ + K+C
Sbjct: 399 SRLVGVAVQAYLSQNMDKEAVLVFEEALKSC 429
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 143/274 (52%), Gaps = 10/274 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ YF+ +P + + Y +LL Y A+ EKAEELFE ++ ++ N+
Sbjct: 128 ISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERVEKAEELFENMRGMGMA-NSY 186
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN MM LY +GQVE+V + + ++ +VPDIFT + +S+ A +++ ++K L++
Sbjct: 187 AYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKVLEKA 246
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ--WITYDFLIILYAG 178
SC++ S W + + +++ A A E+EK IT R+ + Y FL+ +YA
Sbjct: 247 SCNNLMS--WHSFAIVGKVFMKAGMQERA-LQAFQESEKRITARKDGRVAYGFLLTMYAD 303
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
L ++D+IW R +K ++ N Y+C +S L + + + ++W +S D
Sbjct: 304 LQMDSEVDRIWDVYR-SKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEW-ESKHVYHD 361
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL A+ GL EKA ++K P
Sbjct: 362 SRLINILLTAYCKEGLMEKAEALVDQFIKKGRTP 395
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 140/260 (53%), Gaps = 10/260 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ YF+ +P + + Y +LL YA A+ EKAEELFE ++ ++ N+
Sbjct: 128 ISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMRGMGMA-NSY 186
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN MM LY +GQVE+V + + ++ +VPDIFT + +S+ A +++ ++K L++
Sbjct: 187 AYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVEAIEKVLEKA 246
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ--WITYDFLIILYAG 178
SC++ S W + + +++ A A E+EK IT R+ + Y FL+ +YA
Sbjct: 247 SCNNLMS--WHSFAIVGKVFMKAGMQERA-LQAFQESEKRITARKDGRVAYGFLLTMYAD 303
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
L ++D+IW R +K ++ N Y+C +S L + + + ++W +S D
Sbjct: 304 LQMDSEVDRIWDVYR-SKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEW-ESKHVYHD 361
Query: 237 ISACNRLLGAFSDVGLTEKA 256
N LL A+ GL EKA
Sbjct: 362 SRLINILLTAYCKEGLMEKA 381
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 135/260 (51%), Gaps = 4/260 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ E YF +P +++ + Y ALL+ A +K KAE +++K N+L
Sbjct: 117 ISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGKAEATMQKMKDLGFVKNSL 176
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M++LY +G EK+ +V+E++ + D TY + +++C + +I+ ++K L +M
Sbjct: 177 SYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLNACVNSSDIEGMEKLLMKM 236
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGL 179
D S + YV N Y+ A LV+ L +E+ I+ + Y+FL+ LY
Sbjct: 237 EVDPNISVGFHAYVIAANGYLKAG-LVDKTLIMLKRSEQLISGNTRRFAYEFLLTLYTAS 295
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GNK ++ +IW + + S YIC++SS L L + I ++W S FDI
Sbjct: 296 GNKAEVYRIWNKYKEIGRFFNS-GYICMISSLLKLDDIDGAERIFEEW-DSKKVLFDIRI 353
Query: 240 CNRLLGAFSDVGLTEKANEF 259
N ++ +S G EKA +
Sbjct: 354 PNSMVNVYSRKGHLEKAETY 373
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 118/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 133/257 (51%), Gaps = 4/257 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV GI + E YF +P +K+ +TY+ LL+ Y K E +E++K ++ + L
Sbjct: 128 ISKVHGIQAAEEYFWSIPDISKSVKTYSCLLNCYGKHGLAYKGLEFYEKMKAKSIVPDKL 187
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+YN +M LY GQ EK+ EE++ + D F Y I S ++D +K L E+
Sbjct: 188 VYNYLMILYQKAGQPEKILSTFEEMRESGISADKFAYFTLIESYITMNDLDAAEKVLAEL 247
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
W Y + N YI AE + + +AE+ + + ++ L+ L+A G
Sbjct: 248 Q--KVAPVHWSLYTLMANNYIKLKLFGKAEVA-IKKAEEGMDKADLRSWYALLSLHAHCG 304
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N ++ ++WKSL+ T +K +R+Y+ +L + M+ + + +I +W QS+ +D
Sbjct: 305 NSTEVKRVWKSLKSTFKKCLNRSYLVMLQALSMIDDFESLQQIFQEW-QSSHEHYDKRIA 363
Query: 241 NRLLGAFSDVGLTEKAN 257
N ++ A+ D G+ ++A
Sbjct: 364 NVVIKAYLDKGMIDEAE 380
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 145/272 (53%), Gaps = 7/272 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF-NA 59
++KV G+ E+YF P S ++ + Y ALL+ Y+ K EKAE + + ++ ++ F
Sbjct: 113 ISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMR--DMGFVKT 170
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L YN M+ LY +G+ EK+ +++E++ + D FTY + +++ AT +++ ++K L +
Sbjct: 171 LSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMK 230
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAG 178
+ D + DW Y+ N Y+ A L L ++E+ I+ R + Y+ L+ LYA
Sbjct: 231 LETDPAVNSDWNAYIVAANGYLKAD-LKEKAVEMLKKSEQFISGRSRRFGYEILLTLYAT 289
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
+GNK ++ +IW +L T K + Y+ ++SS L L + + ++W S FD
Sbjct: 290 MGNKTEVYRIW-NLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEW-LSGNKFFDFR 347
Query: 239 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+ A+ GL EKA + +++ P
Sbjct: 348 VPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEP 379
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGKLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEDLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 63
V G+ E YF + + KTS Y ALL Y K EKAE + + +++ ++ + YN
Sbjct: 117 VHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKMGIATTSFAYN 176
Query: 64 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
++ LY +GQ +K+ L++EE+K K + DI++ ++ A +I ++K L + D
Sbjct: 177 VLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGMEKILKRIEED 236
Query: 124 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 183
S DW Y N Y+TA A S EK + FL+ LY G+K+
Sbjct: 237 SELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLLSLYERTGHKN 296
Query: 184 KIDQIWKSLR-MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W + + +TK+ T Y +++S L ++ I +W+ T +D NR
Sbjct: 297 EVYRVWNTFKPLTKE--TCVPYALMITSLAKLDDIEGAERIFQEWESKCTV-YDFRVLNR 353
Query: 243 LLGAFSDVGLTEKA 256
LL A+ GL +KA
Sbjct: 354 LLVAYCRKGLLDKA 367
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 136/264 (51%), Gaps = 4/264 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV G+ + E YF LP K+ +TY++LL+ YA + +K ELFE++K N++ + L+Y
Sbjct: 164 KVNGLEAAEEYFWSLPEMFKSIKTYSSLLNCYAEHRKADKGLELFEKMKAMNITPSTLVY 223
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M LY+ Q EK+ E+++ +V D FTY + S ++ +KF++E+
Sbjct: 224 NNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYYMLTQSYIMVNDLKSAEKFVEEL-- 281
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ W Y L N Y + A L +AE+ + + + + L+ LYA GN
Sbjct: 282 EKSTPVPWSLYTVLANNYNKLAQFDKA-VLALKKAEEVMDRSEISAWHNLLSLYASSGNS 340
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
++ ++W+SL+ K +R+Y+ +LS+ L + ++ +W +S +D+ N
Sbjct: 341 SEVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDSLQQLFQEW-ESTHERYDMRITNV 399
Query: 243 LLGAFSDVGLTEKANEFHMLLLQK 266
++ A+ +T++A + K
Sbjct: 400 MIEAYLAKDMTDEAEALRQTAMAK 423
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 125/227 (55%), Gaps = 8/227 (3%)
Query: 47 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 106
+++++ L YN M+ LY +G+ EK+A +++E++ + PD FTYN+ +++ AA
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 107 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQR 164
+I ++K L +M D + DW Y + N Y A +E+S L+ +AE+ I +
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGL---SENSILMLKKAEQFIGDK 117
Query: 165 Q-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
Q W+ Y +L+ LYA +GNKD++ ++W +L QK + Y+CI+SS + L + I
Sbjct: 118 QKWLAYQYLMTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERI 176
Query: 224 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ +W+ TS FD N ++ ++ G +KA + L++ P
Sbjct: 177 LKEWESGDTS-FDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEP 222
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 5/253 (1%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 63
V G+ + E YF LP K+ +TY++LLH YA K EKA EL+E+++ N+ N L+Y
Sbjct: 118 VNGLEAAEEYFLSLPDMYKSVKTYSSLLHCYAEHK-AEKALELYEKMRTMNIVPNTLVYK 176
Query: 64 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
+M+LY+ GQ EK+ EE++ V D FTY + S ++ +KFL+++ +
Sbjct: 177 NLMSLYLKTGQPEKILQTFEEMRANGVRTDNFTYYMLTESHIMLNGLESTEKFLEDL--E 234
Query: 124 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 183
W Y L + Y A TL +AE+ + + + + L+ LYA GN
Sbjct: 235 KSIPVHWSLYTRLADSYNKVGQFDKA-GLTLKKAEEVMDRGEMFAWHNLLSLYASSGNLS 293
Query: 184 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 243
++ ++W SLR + ++R+Y+ +LS+ L + ++ +W+ + S +D+ N +
Sbjct: 294 EVKRVWSSLRSELKISSNRSYLVMLSALKKLDDFDCMQQVFQEWELTQES-YDMRIPNVM 352
Query: 244 LGAFSDVGLTEKA 256
+ A+ +T++A
Sbjct: 353 IKAYLAKDMTDEA 365
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ S E++FE +P AK T ALLH Y +KAE + E + ++ AL
Sbjct: 106 VAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCAL 165
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N MM+LYMS G++EKV +++E+ R+ +PD+ TYN+W++ C+ ++ +K D M
Sbjct: 166 PFNHMMSLYMSSGELEKVPEMIKEL-RRYTIPDLVTYNIWLTYCSKKNSVKAAEKVYDLM 224
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
D DW+ + L +IYI A V + LVE EK ++++ Y L+ LYA L
Sbjct: 225 K-DERVVPDWMTFSLLGSIYINAGLHVKGRDA-LVEMEKRASRKERAAYSSLLTLYASL 281
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y + L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKSGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 146/265 (55%), Gaps = 5/265 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ E +F+G+P + + Y +LL YA K E+AE + +++K+ +
Sbjct: 112 ISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLEEAEAIMKKIKELRPMHLTV 171
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN ++ LY G+ EK+ +++E+K +N + + T+ + +++ A +++ ++K L +M
Sbjct: 172 CYNILLKLYAQKGKYEKLDRLMQEMK-ENDLCNGATFTIRLNAYVAAKDVEGMEKLLMQM 230
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW-ITYDFLIILYAGL 179
D + DW Y N Y+ A ++ A ++ L ++E+S+ ++ + Y+ L YA +
Sbjct: 231 EADPMATVDWYTYSTAANGYLKAGNVEKALAA-LKKSEQSVKGKKLRLAYESLQSTYAAI 289
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
GNKD++ ++W ++ Q + +YIC+LSS L L +I+ +W +S +FD
Sbjct: 290 GNKDEVYRLWNRIK-NLQNCWNSSYICMLSSLLKLDDFDGAEKILAEW-ESEHKNFDTRI 347
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLL 264
N ++ A+ GL +KA + LL
Sbjct: 348 PNLMITAYCKRGLLDKAEAYIQKLL 372
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 138/271 (50%), Gaps = 4/271 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E YF + + KT + Y ALL+ YA K +KAE + +R++ AL
Sbjct: 126 ILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYALEKSVDKAEAIMQRLRDLGFVRTAL 185
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +M +Y +G EK+ +++ E++ K + D FT + +S+ AA NI + + M
Sbjct: 186 GYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAIRLSAYAAASNIVGIDNIVTRM 245
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAGL 179
D DW Y + + Y+ LV+ + + E+ I + + +D L+ LYA
Sbjct: 246 ESDPRIILDWNSYAVVAHGYLKVG-LVDKTLVMMKKLEELIDAKGSNVAFDNLLKLYAET 304
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
+D++D++W L K+K+ ++ Y+ ++SS L + +++++W+ S +D
Sbjct: 305 RQRDELDRVW-MLYKKKEKIYNKGYMAMISSLLKFDDIDAAEKVLEEWESRRLS-YDFRV 362
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+ A+ GLTEKA +L K P
Sbjct: 363 PNFLIDAYCRKGLTEKAEALVNKILTKGGNP 393
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQ-------- 52
+ KV G+ E YF + + KT + Y ALL+ YA K +KAE + +R++
Sbjct: 47 ILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYALEKSVDKAEAIMQRLRDLGFISQWM 106
Query: 53 SNLSFNALMYNEM---MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS--SC-AA 106
S+ + LM ++ M L + V +E+V E N+ ++ TY ++I+ +C A
Sbjct: 107 SDKRYIPLMPRDIALRMNLILKVHGLEQV-----ENYFNNIHKNLKTYQVYIALLNCYAL 161
Query: 107 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++D+ + + + D G + Y L+N+Y
Sbjct: 162 EKSVDKAEAIMQRLR-DLGFVRTALGYNTLMNVY 194
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 144/272 (52%), Gaps = 7/272 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF-NA 59
++KV G+ E+YF P S ++ + Y ALL+ Y+ K EKAE + + ++ ++ F
Sbjct: 113 ISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMR--DMGFVKT 170
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L YN M+ LY +G+ EK+ +++E++ + D FTY + +++ AT +++ ++K L +
Sbjct: 171 LSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMK 230
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAG 178
+ D + DW Y+ N Y+ A L L ++E+ I+ R + Y+ L+ LYA
Sbjct: 231 LETDPAVNSDWNAYIVAANGYLKAD-LKEKAVEMLKKSEQFISGRSRRFGYEILLTLYAT 289
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
+GNK + +IW +L T K + Y+ ++SS L L + + ++W S FD
Sbjct: 290 MGNKTEXYRIW-NLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEW-LSGNKFFDFR 347
Query: 239 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+ A+ GL EKA + +++ P
Sbjct: 348 VPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEP 379
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLDKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 TNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGELEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 TNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGELEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
+V +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGELEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PKIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y AK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
KV +V E+K+K + D ++YN+W+S+ + + + +++ EM D + +W + +
Sbjct: 61 KVEELVSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
+Y L AE L E IT R + Y +LI LY LGN+ ++ ++W +
Sbjct: 121 AAMYSKLGQLEKAE-QCLRNLETRITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
+V +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + K Y ALL+ Y GAK +KAE L E+++ L YN MMTLYM + +++
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
+V +V E+K+K + D ++YN+W+S+ + + + +++ EM D +W + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++Y L AE L E IT R + Y +L+ LY LGN+ ++ ++W +
Sbjct: 121 ASMYAKLGQLEKAE-QCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVF 179
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ + Y ++SS + G ++ ++ ++W S FD N
Sbjct: 180 PNIPNWGYHSVISSLVRSGDIEGAEKLYEEW-LPVKSSFDPKIGN 223
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 133/255 (52%), Gaps = 3/255 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G+ E YF L + KT TY A+L+ K +KAE + + +++ ++ ++ Y
Sbjct: 23 RVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSVQKAEAVMQEMREGGMTTSSFPY 82
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ LY G +K+ +++E++R + D +T I++ A +I V++ L M
Sbjct: 83 NILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNLIAASVAASDISGVERILKLMEE 142
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGN 181
+ DW Y + Y+ + A + L + EK + +++ ++FL+ LYA GN
Sbjct: 143 NPELGLDWKLYAMAADAYLKIGSIETA-LTMLEKLEKWMAFRKKKAVFNFLLSLYAKTGN 201
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
KD++ +IW + + + M + +Y C++ S L ++ +I ++W+ T+ +D N
Sbjct: 202 KDELYRIWNLYKPSSESMDT-SYCCMIDSLTKLDDIEGAEKIFEEWESQCTTTYDFRVLN 260
Query: 242 RLLGAFSDVGLTEKA 256
LL A+ + GL EKA
Sbjct: 261 GLLVAYCNRGLFEKA 275
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 140/257 (54%), Gaps = 4/257 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G+ S E+YF + + + Y ALL+ Y +K+ +++K+ L+ + L Y
Sbjct: 126 QVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGLASSPLCY 185
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N++M LY++ GQ +KV V+ E+K V+PD F+Y + ISS A ++ ++ L EM
Sbjct: 186 NDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVLKEMEG 245
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ S DW Y + +I A + + + L + E + + + ++ LI Y LG+K
Sbjct: 246 QTHISMDWTTYSMVAGFFIKAG-MHDKAMNYLRKCEDKVDE-DALGFNHLISHYTNLGHK 303
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
+++ ++W L+ K+++ +R+YI +L S + L L+E ++ +W +S+ +D N
Sbjct: 304 NEVMRLWALLKKGKKQL-NRDYITMLGSLVKLELLEEAENLVMEW-ESSCQCYDFRVPNV 361
Query: 243 LLGAFSDVGLTEKANEF 259
+L +S GL EKA +
Sbjct: 362 VLIGYSQKGLIEKAEKM 378
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 10/274 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKV G+ YF+ +P K + Y +LL YA AK EKAEELFE+++ ++ ++
Sbjct: 160 ITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCVEKAEELFEKMRGMGMA-SSY 218
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN MM LY+ GQVE+V + ++ +V D+FT + +++ +I+ ++K L++
Sbjct: 219 AYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTLVAAYVVAEDIEAIEKVLEKA 278
Query: 121 -SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAG 178
+C+ + W Y + + + S + E+EK I ++ + Y FL+ +YA
Sbjct: 279 DTCNDLMT--WHSYATIGKV-LMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYAD 335
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
LG ++D+IW + +K ++ N Y+C +S L + + + ++W +S D
Sbjct: 336 LGMNSEVDRIWDVYK-SKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEW-ESKHVYHD 393
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N LL A+ GL EKA ++K P
Sbjct: 394 SRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTP 427
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 40/274 (14%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K GI + + YF LP SAK + A+L+ Y EKAE E++K+ +L +++
Sbjct: 109 LAKARGITAAKNYFVNLPESAKNHLCHGAILNCYCKEPMIEKAEGFMEKMKELSLPLSSM 168
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN ++ LY VGQ EKV+ +++E+K N++ D +TYN+W+ + AA +I V++ DEM
Sbjct: 169 PYNSLIMLYTKVGQPEKVSSLIQEMKTSNIMLDSYTYNVWMRALAAVNDISSVERVHDEM 228
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
L E EK + Y FLI Y
Sbjct: 229 MA-------------------------------LTELEKRNAFKDLTAYQFLITFYGXTS 257
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
N ++ ++W+SLR+ K + +Y+ ++ S +LG K + +D
Sbjct: 258 NLYEVFRVWRSLRLAFPKTANISYLNMIRVLVKSKDLLGEEKCF-----XEXECGCPTYD 312
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
I N L+ A++ + + EKA E ++ P
Sbjct: 313 IRVVNVLIRAYAKLDMLEKAEELKEHARRRGAKP 346
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 5/256 (1%)
Query: 4 VFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
V+GI + E YF G+P + TY ALL+ Y AK EKA ++ R+ + + + +
Sbjct: 129 VYGIEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKL 188
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
N +M LY+ +GQ KVA + +E+K +NV PD T + + S AA ID VK+ MS
Sbjct: 189 MNNLMGLYLELGQHSKVANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTVKETFYNMS 248
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
W + L +IY+ A + AE + + E + FL+ +A +GN
Sbjct: 249 L-LDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPFYFLMRQFASIGN 307
Query: 182 KDKIDQIWKSLRMT-KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++++WK ++MT T+ +Y+ +L LG + EI +W + ++D
Sbjct: 308 LRGVNRVWKDIKMTFSYNRTNFSYLLMLQCLYKLGDTDRMKEIYKEW-EYRYENYDPRLT 366
Query: 241 NRLLGAFSDVGLTEKA 256
N L A G+T +A
Sbjct: 367 NMLTRAHLRNGMTNEA 382
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 135/259 (52%), Gaps = 6/259 (2%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSFNALMY 62
V G+ E++FE +P +A+ YT LL+ YA + T KAE F+++++ L Y
Sbjct: 109 VVGLEEAEKFFESIPKNARDDSVYTTLLNWYARSDKTLCKAEATFQKMRELGLLSRPSPY 168
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N MM+LY+++ EKV ++ E+K +V D T N + +A ++ ++KFL++
Sbjct: 169 NAMMSLYIALNDREKVEELLREMKDNDVEADSITVNNVLKLYSAVCDVTAMEKFLNKWEG 228
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI--TYDFLIILYAGLG 180
+G +W+ +++ Y+ A N ++ ++ + + R+ + YD L+ LY G
Sbjct: 229 INGIKLEWLTTLDMAKAYLRARS--NGKAIKMLRLTEELADRKSLKSAYDHLMKLYGEAG 286
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
N++++ +IW +M + ++ Y ++ S L + + EI W +S + +FDI
Sbjct: 287 NREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAEEIYKVW-ESLSLEFDIRIP 345
Query: 241 NRLLGAFSDVGLTEKANEF 259
L + + G+TEKA +
Sbjct: 346 TMLASGYRERGMTEKAEKL 364
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA--KWTEKAEELFERVKQSNLSFNALM 61
V G+ E+YFE +P + K Y ALL YA + EE+ ++++N+ +++
Sbjct: 441 VLGLEKAEKYFENIPENMKDYSVYVALLSSYAKSDKNLENMVEEILREMEENNVDPDSIT 500
Query: 62 YNEMMTLYMSVGQVEKVAL 80
N ++ +Y + +VE + +
Sbjct: 501 VNYVLKVYAAASKVEAMEM 519
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 141/267 (52%), Gaps = 10/267 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ E+YF G+P + + Y ALL YA K E+AE + +++K+ +
Sbjct: 100 ISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVEEAEAVLKKIKELHPVNITA 159
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N M+ LY G+ EK+ +++E+K K++ + TY + +++ +I ++K L +M
Sbjct: 160 CCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NAGTYTIRLNAYVIATDIKGMEKLLMQM 218
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE---KSITQRQWITYDFLIILYA 177
D + DW Y+ N Y H ++ L ++E + T+R + Y+ + +YA
Sbjct: 219 EVDPMATVDWYTYMTAANGY-RKVHNFEKVAAMLKKSEHVARGKTKR--LAYESIQTMYA 275
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
+GNKD++ ++W T K +++YI +LSS + L + +I+++W +S +FD+
Sbjct: 276 IIGNKDEVHRLWNMC--TSPKKPNKSYIRMLSSLVKLDDIDGAEKILEEW-ESVHENFDV 332
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLL 264
N ++ A+ G +KA + LL
Sbjct: 333 RIPNLMISAYCKWGQFDKAEAYIRRLL 359
>gi|255646331|gb|ACU23650.1| unknown [Glycine max]
Length = 80
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 194 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 253
MTKQKM SRNY+CI+ SYLMLG KEVGE+IDQWKQS T DFD+ AC ++L F D+GL
Sbjct: 1 MTKQKMISRNYMCIIFSYLMLGFTKEVGEVIDQWKQSTTPDFDMLACKKILVVFRDIGLA 60
Query: 254 EKANEFHMLLLQKN 267
E AN +++ ++KN
Sbjct: 61 EIANNLNVIFIEKN 74
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 5/256 (1%)
Query: 4 VFGIHSGERYFEGLP--LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
V+GI + E YF G+P + TY ALL+ Y AK EKA ++ R+ + + + +
Sbjct: 129 VYGIEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKL 188
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
N +M LY+ +GQ K A + +E+K +NV PD T + + S AA ID VK+ MS
Sbjct: 189 MNNLMGLYLELGQHSKAANLFDEMKERNVQPDELTCCILMRSHAAHNKIDTVKETFYNMS 248
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
W + L +IY+ A + AE + + E + FL+ +A +G+
Sbjct: 249 L-LDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPFYFLMRQFASIGS 307
Query: 182 KDKIDQIWKSLRMT-KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++++WK ++MT T+ +Y+ +L LG + EI +W + ++D
Sbjct: 308 LRGVNRVWKDIKMTFSYNRTNFSYLLMLQCLYKLGDTDRMKEIYKEW-EYRYENYDPRLT 366
Query: 241 NRLLGAFSDVGLTEKA 256
N L A G+T +A
Sbjct: 367 NMLTRAHLRNGMTNEA 382
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 129/258 (50%), Gaps = 6/258 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ S YF GL K S+ Y +LL YA AK+ E+AE+ F +++ + ++
Sbjct: 114 ISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKFVEEAEKFFGEMQEMGM-MSSY 172
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN MM LY GQVEKV + ++ + PD+FT ++ ++ A+ +++ +++ L E
Sbjct: 173 PYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDILLTVYKASGDLEGIEEVL-EK 231
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW-ITYDFLIILYAGL 179
+ W Y + + ++ A L L E+EK I + + Y FL+ + A
Sbjct: 232 AKPRENLVGWHSYAIVASAFMKAG-LQGKALQALQESEKRIDPKNGRVAYGFLLSMCADS 290
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G + ++D+IW + +K + Y+C +S+ L + E + +W +S D
Sbjct: 291 GMRSEVDRIWDVYK-SKVPTCNSMYMCRISALLKMNDTDEAEKAFREW-ESRFVHHDFRL 348
Query: 240 CNRLLGAFSDVGLTEKAN 257
N LL + GL EKA
Sbjct: 349 INLLLNGYCAEGLMEKAE 366
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 140/267 (52%), Gaps = 9/267 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ ERYF G+P + Y ALL YA K E+AE + + +K+ +
Sbjct: 100 ISKVHGLEQAERYFRGIPDDKIEFKIYAALLRCYAEHKSVEEAEAVMKXIKELHPVNITP 159
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N M+ LY G+ EK+ +++E+K K++ + TY + +++ +I ++K L +M
Sbjct: 160 CCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NASTYTIRLNAYVVVTDIKGMEKLLMQM 218
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE---KSITQRQWITYDFLIILYA 177
D + DW Y+ N Y H + L ++E + T+R + ++ + +YA
Sbjct: 219 EADPVATVDWYTYMTAANGYRRV-HNFEKVAEMLKKSEHLARGNTRR--LAFESIQTMYA 275
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
+GNKD++ ++W ++ + +K + +YI +LSS L + +I+++W +S ++FD+
Sbjct: 276 IIGNKDEVYRLW-NMCTSLKKPNNSSYIRMLSSLAKLDEIDGAEKILEEW-ESKYANFDV 333
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLL 264
N ++ A+ G +KA + LL
Sbjct: 334 RIPNLMISAYCKWGQFDKAEAYIRRLL 360
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 141/267 (52%), Gaps = 8/267 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+++V G+ E +FE +P K +++LL YA K EKA +L E +K++ +S +
Sbjct: 114 ISRVCGLGEAEVFFENIPKDMKGIAVFSSLLSCYAREKSAEKAAKLVEAMKEAGVSMDTR 173
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN MM +Y + K+ ++ E+++ V D FT ++ +S+ AA NI+ ++K ++++
Sbjct: 174 CYNLMMNMYYQMNVHGKLDDLMLEMEQNGVSFDQFTLSIRLSAYAAASNIEGIEKTIEKI 233
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW-ITYDFLIILYAGL 179
S S + DW Y N ++ L++ + L + E+ + + + L+ LY
Sbjct: 234 SSMSETAIDWTIYSAAANAFLKV-ELIDEATMMLKKCEEFVNEDSGNEAFHTLLKLYGET 292
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G K+ + ++W + ++K+ + Y ++SS L G ++ V ++ +QW+ S +D
Sbjct: 293 GRKEDLSRVWLRFK-EERKVFNSGYKIMISSALKFGDIELVEKVFNQWESEKLS-YDFRI 350
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQK 266
N L+ + + LTEKA LLL+K
Sbjct: 351 PNLLINFYCEKDLTEKAE----LLLKK 373
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 4/248 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S + A L L A A T +AEE + ++ QS + A + ++ Y+ EKV V+
Sbjct: 143 SSWDHAARLDLIAKAYSTSQAEEYYNKL-QSPATRQAASF-PLLHCYVMERDHEKVLSVI 200
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ +KR N+ ++ +YNLW+++CA +D V+ M D W Y L NI+
Sbjct: 201 DLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDETVKVGWSTYCTLANIF-R 259
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ L + LV+AE ++ + Y F++ YA L + D + ++W++ + ++ +
Sbjct: 260 KNGLNTEAQACLVKAEAKLSPTGRLGYSFVMTCYAALNDSDGVMRMWEASKSVPGRILTA 319
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y+ +S + +G + + I +W ++ D+ N LLGA+ EKA H+
Sbjct: 320 YYMAAMSCSIKVGDISQAECIFGKW-EAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLH 378
Query: 263 LLQKNCAP 270
+L+K P
Sbjct: 379 MLEKGACP 386
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 126/250 (50%), Gaps = 3/250 (1%)
Query: 10 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
E+ E P KT Y LL YA + +KA+ L E++K + + +N+MM LY
Sbjct: 76 AEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLKGTGILTLPFAFNQMMLLY 135
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
G + KV ++ ++K V D++TYN+ + A + +I+ ++K +E+S D D
Sbjct: 136 KRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIEGMEKIFEELSADENVKAD 195
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ L + A L++ S L E E+ R YD LI Y +G+++ ++++W
Sbjct: 196 AATFGTLATFCVHAG-LLDKARSYLKEMEEGDVFRNRSAYDILISQYGAVGDQEGVERVW 254
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
+ ++ + +++R+YI ++ ++ LG +++ E+ +S N LL A++
Sbjct: 255 EKVK-SGPVVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLILS-RQFNSLLSAYAR 312
Query: 250 VGLTEKANEF 259
GL EKA +
Sbjct: 313 QGLMEKAEKL 322
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ +Y ++ + EKAEEL+ + +S + +N +++ Y G +EK +V
Sbjct: 264 SNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLILSRQFNSLLSAYARQGLMEKAEKLV 323
Query: 83 EEI----KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS--GGSDDWVK-YVN 135
E++ ++KN V TY+ ++ T +D+ + E DS G S WV+ ++
Sbjct: 324 EDMVKLGRKKNAV----TYHHLVTGYLKTDQLDKALAVMKEAQGDSKQGRSRLWVETLIS 379
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 176
+++ Y +++AE + +K+ + Y+ L+ Y
Sbjct: 380 VLDAYAERGDVISAEKQ-FQDIKKAYPRPNIQVYNILLKAY 419
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSFNALMY 62
V G+ E++FE +P +A+ YT+LL+ YA + T KAE F++++ L + Y
Sbjct: 117 VVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPY 176
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N MM+LY ++ EKV ++ E+K +V D T N + +A ++ +++KFL++
Sbjct: 177 NAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEG 236
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGLGN 181
G +W +++ Y+ A A L E+ + Q+ + YD L+ LY GN
Sbjct: 237 IHGIKLEWHTTLDMAKAYLRARSSGKA-MKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGN 295
Query: 182 KDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
++++ ++WK + K K+ R+ Y ++ S L + + EI W +S +FD
Sbjct: 296 REEVLRVWK---LYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVW-ESLPLEFDHR 351
Query: 239 ACNRLLGAFSDVGLTEKANEF 259
L + D G+TEKA +
Sbjct: 352 IPTMLASGYRDRGMTEKAEKL 372
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA--KWTEKAEELFERVKQSNLSFNALM 61
V G+ E+YFE +P + K Y ALL YA + +E+ ++++N+ + +
Sbjct: 449 VLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENNVDPDLIT 508
Query: 62 YNEMMTLYMSVGQVEKVAL 80
N ++ +Y + +++ + +
Sbjct: 509 VNHVLKVYAAESKIQAMEM 527
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSFNALMY 62
V G+ E++FE +P +A+ YT+LL+ YA + T KAE F++++ L + Y
Sbjct: 117 VVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPY 176
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N MM+LY ++ EKV ++ E+K +V D T N + +A ++ +++KFL++
Sbjct: 177 NAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEG 236
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGLGN 181
G +W +++ Y+ A A L E+ + Q+ + YD L+ LY GN
Sbjct: 237 IHGIKLEWHTTLDMAKAYLRARSSGKA-MKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGN 295
Query: 182 KDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
++++ ++WK + K K+ R+ Y ++ S L + + EI W +S +FD
Sbjct: 296 REEVLRVWK---LYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVW-ESLPLEFDHR 351
Query: 239 ACNRLLGAFSDVGLTEKANEF 259
L + D G+TEKA +
Sbjct: 352 IPTMLASGYRDRGMTEKAEKL 372
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGA--KWTEKAEELFERVKQSNLSFNALM 61
V G+ E+YFE +P + K Y ALL YA + +E+ ++++N+ + +
Sbjct: 449 VLGLEEAEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMVDEILREMEENNVDPDLIT 508
Query: 62 YNEMMTLYMSVGQVEKVAL 80
N ++ +Y + +++ + +
Sbjct: 509 VNHVLKVYAAESKIQAMEM 527
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++ V G E YF +P + KTS Y ALL Y K EKAE +++++ + + ++
Sbjct: 100 ISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAEATMQKMREMDFATSSF 159
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY-NLWISSCAATLNIDQVKKFLDE 119
YN ++ LY G K+ +++E++ K + D FT NL ++ AA+ +I ++KFL+
Sbjct: 160 PYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAYVAAS-DISAMEKFLNR 218
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAG 178
M D S DW Y + Y+ + A E +E+ + +R + FL+ LYA
Sbjct: 219 MEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHLER-LSAFKFLLSLYAR 277
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
G+K ++ ++W + + + Y C+++ L ++ +I +W+ T +D
Sbjct: 278 TGHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIEGAEKIFQEWECECTM-YDFR 334
Query: 239 ACNRLLGAFSDVGLTEKA 256
NRLL A+ L +KA
Sbjct: 335 VLNRLLSAYCKRCLFDKA 352
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++ V G E YF +P + KTS Y ALL Y K EKAE +++++ + + ++
Sbjct: 100 ISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAEATMQKMREMDFATSSF 159
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY-NLWISSCAATLNIDQVKKFLDE 119
YN ++ LY G K+ +++E++ K + D FT NL ++ AA+ +I ++KFL+
Sbjct: 160 PYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAYVAAS-DISAMEKFLNR 218
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAG 178
M D S DW Y + Y+ + A E +E+ + +R + FL+ LYA
Sbjct: 219 MEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHLER-LSAFKFLLSLYAR 277
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
G+K ++ ++W + + + Y C+++ L ++ +I +W+ T +D
Sbjct: 278 TGHKQELYRVWNLYKPSYE--YPEAYSCMITCLTKLDDIEGAEKIFQEWECECTM-YDFR 334
Query: 239 ACNRLLGAFSDVGLTEKA 256
NRLL A+ L +KA
Sbjct: 335 VLNRLLSAYCKRCLFDKA 352
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 8/251 (3%)
Query: 6 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNE 64
GI + E+ FE L KT Y ALL Y +KAE LFE + ++ LS + N
Sbjct: 232 GIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFLSQSPFALNL 291
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
MM LY G K ++E+ K V P+IFTYN+ + A +++ ++K +EM +
Sbjct: 292 MMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEKIFEEMKLNP 351
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
D Y L Y+ A AE S L+ E +R T++++++ Y LG
Sbjct: 352 NAKPDGTSYFTLCKGYLKAGLTDKAEVS-LLRMEVGPFRRTKATFEYMMLAYGQLGLISD 410
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI---IDQWKQSATSDFDISACN 241
++++W+ +M + +++ + + G ++ V + +D+WK+S T D+ N
Sbjct: 411 VERMWQKCKMVPGDGFN-SFLAFQRAMALAGEVQRVDSMFKHMDKWKRSKT--VDLKRHN 467
Query: 242 RLLGAFSDVGL 252
LL A+ G+
Sbjct: 468 NLLLAYYKKGM 478
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 5/257 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ YF +P + + Y +LL Y AK +KAEE F ++++ ++ ++
Sbjct: 118 ISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDKAEEHFAKMQEMGMT-SSY 176
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
Y MM LY+ GQ+E+V + ++++ K V PD F+ +++ A ++ V K LD+
Sbjct: 177 AYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLAAYIAAEDVQGVGKVLDKA 236
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAGL 179
+ W + + ++++ + V A LVEAE+ I+ + I Y FL+ Y L
Sbjct: 237 NPHEKLV-TWHGHASAASLFMKSGMQVGA-VMALVEAERRISPKSSRIAYAFLLKTYTEL 294
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G + +IW S+ +K + Y+ LS+ L + + +W+ D
Sbjct: 295 GMHAEAGRIW-SVYKSKVPPCNTMYMSRLSALLRTNDIDGAEATLKEWETVPLRYHDFRL 353
Query: 240 CNRLLGAFSDVGLTEKA 256
N ++ A+ GL EKA
Sbjct: 354 INVMVDAYCREGLVEKA 370
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 8/251 (3%)
Query: 6 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNE 64
GI + E+ FE L KT Y ALL Y +KAE LFE + ++ LS + N
Sbjct: 213 GIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGFLSQSPFALNL 272
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
MM LY G K ++E+ K V P+IFTYN+ + A +++ ++K +EM +
Sbjct: 273 MMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGMEKIFEEMKLNP 332
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
D Y L Y+ A AE S L+ E +R T++++++ Y LG
Sbjct: 333 NAKPDGTSYFTLCKGYLKAGLTDKAEVS-LLRMEVGPFRRTKATFEYMMLAYGQLGLISD 391
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI---IDQWKQSATSDFDISACN 241
++++W+ +M + +++ + + G ++ V + +D+WK+S T D+ N
Sbjct: 392 VERMWQKCKMVPGDGFN-SFLAFQRAMALAGEVQRVDSMFKHMDKWKRSKT--VDLKRHN 448
Query: 242 RLLGAFSDVGL 252
LL A+ G+
Sbjct: 449 NLLLAYYKKGM 459
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 127/257 (49%), Gaps = 5/257 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ YF +P + + Y +LL Y AK +KAEE F ++++ ++ ++
Sbjct: 73 ISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDKAEEHFAKMQEMGMT-SSY 131
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
Y MM LY+ GQ+E+V + ++++ K V PD F+ +++ A ++ V K LD+
Sbjct: 132 AYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLAAYIAAEDVQGVGKVLDKA 191
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAGL 179
+ W + + ++++ + V A + LVEAE+ I+ + I Y FL+ Y L
Sbjct: 192 NPHEKLV-TWHGHASAASLFMKSGMQVGAVMA-LVEAERRISPKSSRIAYAFLLKTYTEL 249
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G + +IW S+ +K + Y+ LS+ L + + +W+ D
Sbjct: 250 GMHAEAGRIW-SVYKSKVPPCNTMYMSRLSALLRTNDIDGAEATLKEWETVPLRYHDFRL 308
Query: 240 CNRLLGAFSDVGLTEKA 256
N ++ A+ GL EKA
Sbjct: 309 INVMVDAYCREGLVEKA 325
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G+ YF +P + + Y +LL Y AK +KAEE F ++++ + ++
Sbjct: 121 ISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCYVEAKAVDKAEEHFAKMQEMGMK-SSY 179
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
Y MM LY+ GQ+E+V + ++++ K V PD F+ +++ A +++ V K LD+
Sbjct: 180 TYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTFSVESMLAAYIAAEDVEGVGKVLDKA 239
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAGL 179
+ W ++++ + V A + L+EAE+ I+ + I Y FL+ Y L
Sbjct: 240 NPHEKLV-KWHGQALAASLFMKSGMQVRAVMA-LLEAERRISPKSSRIAYAFLLKTYTDL 297
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G ++ +IW S+ +K ++ Y+ +S+ L + + + +W+ + D
Sbjct: 298 GMYPEVGRIW-SVYKSKVPPSNTMYLSRISALLKMNDIDGAEATLKEWETVSLRYHDFRL 356
Query: 240 CNRLLGAFSDVGLTEKA 256
N ++ A+ GL EKA
Sbjct: 357 INLMVDAYCREGLVEKA 373
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 122/250 (48%), Gaps = 3/250 (1%)
Query: 10 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
E+ E P KT Y LL Y + +KA L E++K + L +N+MM LY
Sbjct: 36 AEQLLENSPPEFKTELAYHTLLKNYVDHQMAQKAGALLEKLKSTGLLTLPFSFNQMMLLY 95
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
G K+ ++E++K V D++TYN+ + + + +I+ ++K +E+ D D
Sbjct: 96 KRKGMENKLPEILEDMKAHGVPKDVYTYNILMDVKSRSGDIEGMEKIFEELKADENVKAD 155
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ L + A L A+ L E E+ R YD LI Y +G+ D ++++W
Sbjct: 156 AATFGTLATACVHAGLLEKAK-VYLKEMEEGDIFRNRSAYDILISQYGAVGDVDGVERVW 214
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
+ ++ + +++R+YI ++ ++ LG +++ E+ + QS N LL A++
Sbjct: 215 EKVK-SGPIVSNRSYITVIEAFGKLGMVEKAEELYEVMSQSKGLILS-RQFNSLLSAYTR 272
Query: 250 VGLTEKANEF 259
GL +KA +
Sbjct: 273 QGLMDKAEKL 282
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ +Y ++ + EKAEEL+E + QS + +N +++ Y G ++K ++
Sbjct: 224 SNRSYITVIEAFGKLGMVEKAEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLM 283
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS--GGSDDWVK-YVNLVNI 139
+++++ + TY+ ++ T +D+ + E D G S W + V +++
Sbjct: 284 DDMEKLGRKKNAITYHHLVTGYLKTDQLDKAVAAMKEALVDPKQGRSKPWFETLVAVLDA 343
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 176
+ ++VNAE E +K+ + Y+ L+ Y
Sbjct: 344 FAERGNVVNAEQQ-FQEIKKAYPRLNIQVYNILLKAY 379
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
M+KV GI E+YFE +P K E Y ALL+ YA AK +KAE + + ++ + L
Sbjct: 127 MSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCYAYAKSVDKAEAVMQNMRDLGFAGKTL 186
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+ L+ G +K+ ++ E++ + D FT + +S+ AA +I +++K + M
Sbjct: 187 TYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGIQLSAYAAICDIQRMEKIMSRM 246
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLI 173
D+ DW Y + N Y A L++ L ++E IT +++ Y+FL+
Sbjct: 247 ESDANVVTDWCNYAIVANGYRKAG-LMDKALEMLKKSEGLITGKKRSSAYNFLL 299
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 37/187 (19%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G S E YF L KT +TY ALL+ Y + T+K+ +++K+ + + L Y
Sbjct: 119 RVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSPLTY 178
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N++M LY +VGQ EKV V+ E+K+ NV PD F+Y + I+S A +I ++ L EM
Sbjct: 179 NDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEM-- 236
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
E+ R + Y+ LI LYA LGNK
Sbjct: 237 -----------------------------------ERQPHIRDGLGYNHLISLYASLGNK 261
Query: 183 DKIDQIW 189
++ ++W
Sbjct: 262 AEVLRLW 268
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 124/252 (49%), Gaps = 6/252 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+++G E+YFE LP K E Y ALL Y KAE + E ++ ++ + Y
Sbjct: 88 RIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSVRKAEAIMEEMRAKGMANSCFPY 147
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ LY G EK+ ++++E++ VV +T + +++ A NI +++ L+++
Sbjct: 148 NLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAYVAASNISGMERILNQIEK 207
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGN 181
D +DW Y + Y+ L+ + L + E + +++ +D L+ LY G
Sbjct: 208 DPQLGNDWRVYSVAASGYLKFG-LIEKALTMLRKLEDVMPLEKKTSAFDILVTLYGKTGK 266
Query: 182 KDKIDQIWKSLR-MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+D++ +W + + + + K TS + ++SS L +K +I +W +S +D
Sbjct: 267 RDELYLVWNTYKPLIELKETS--VMTMISSLSKLDDIKGAEKIFREW-ESQCMMYDFRVL 323
Query: 241 NRLLGAFSDVGL 252
N LL A+ GL
Sbjct: 324 NTLLFAYCRKGL 335
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 39/307 (12%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
KV+G+H E+Y E +P S ++ Y LL +K+E++F R+K
Sbjct: 223 AKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFNRMKDLGFPVTTFS 282
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
N+++ LY + + +K+A V+ +++++V P IFTY + + + +++ ++K ++ M
Sbjct: 283 SNQLLLLYKRLDK-KKIADVLTMMEKEDVKPSIFTYKVLVDAKGMVGDVEAMEKVVESMV 341
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLG 180
D G D + YI AE TL+E+ E Q+ FL+ LYA LG
Sbjct: 342 KD-GIEPDLTFNATIARQYIFNGQRDKAE--TLLESMEGDDIQKNRAACKFLLPLYAFLG 398
Query: 181 NKDKIDQIWK----SLRMTK----------------------------QKMTSRNYICIL 208
N D +++IWK + R+ + + ++S+ Y +L
Sbjct: 399 NGDAVERIWKVCEDNTRIDECLSAIDAFGKLGNVEKAEKVFEDMFVKWKNLSSKYYTALL 458
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHMLLLQKN 267
Y +L + GE + + + F N L+ ++D G EKA H L L+ N
Sbjct: 459 KVYAN-QNLLDKGEELAKRMDEEGAKFGTPTLNALVKLYADAGEVEKAESLLHKLSLKNN 517
Query: 268 CAPTNAS 274
P+ +S
Sbjct: 518 VKPSYSS 524
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E+ FE + + K +S+ YTALL +YA +K EEL +R+ + F
Sbjct: 428 KLGNVEKAEKVFEDMFVKWKNLSSKYYTALLKVYANQNLLDKGEELAKRMDEEGAKFGTP 487
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
N ++ LY G+VEK ++ ++ K NV P +Y + S + ++ +K ++
Sbjct: 488 TLNALVKLYADAGEVEKAESLLHKLSLKNNVKPSYSSYMTLLDSYSKKGDVHNSEKVFNK 547
Query: 120 M 120
+
Sbjct: 548 L 548
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 123/251 (49%), Gaps = 4/251 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V+G E YFE + K+ Y ALL Y +KAE + + +++ ++ ++ Y
Sbjct: 128 RVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKAEAVLQEMREKGIATSSFPY 187
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N M+ LY G EK+ ++ EE++R + D +T +++ A +I +++ L+++
Sbjct: 188 NIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNLMAAYVAASDISGMERILNQLET 247
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGN 181
W Y + Y+ L+ L + E+++ ++ +++L+ LYA G
Sbjct: 248 HPQLGHGWQAYSVAASGYLKVG-LIEKALKMLRKMEETMPIGKKTSAFNYLLTLYAKTGR 306
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
KD++ ++W S + + + + C++SS + ++ I ++W +S +D N
Sbjct: 307 KDELYRVWNSYKPLAE-VKETQFCCMISSLEKVDDIEGAERIFEEW-ESQCMMYDFRVLN 364
Query: 242 RLLGAFSDVGL 252
+LL A+ GL
Sbjct: 365 KLLLAYCRKGL 375
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 128/271 (47%), Gaps = 8/271 (2%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
TK+ GI GE+ F +P+ + Y L+ + + E +++++ + L+
Sbjct: 117 TKLHGISHGEKLFSRIPVEFQNELLYNNLVIACLDKGVIKLSLEYMKKMRELGFLISHLV 176
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N ++ L+ S G+ + + ++ ++K V P + TYN+ + A N++ + KF M
Sbjct: 177 FNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVKFFSRMK 236
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
++ + Y ++ I + L A + + EKSIT W T D L++LY LGN
Sbjct: 237 VAQVAPNE-ISYC-ILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGYLGN 294
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW--KQSATSDFDISA 239
+ +++++W ++R + S++Y+ + ++ +G L + E+ W +S +
Sbjct: 295 QKELERVWATIRELPS-VRSKSYMLAIEAFGRIGQLNQAEEL---WLEMESTKGLKSVEQ 350
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N ++ + G KA + + + C P
Sbjct: 351 FNSMMSVYCKHGFIGKAAKLYKNMKASGCKP 381
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 129/274 (47%), Gaps = 19/274 (6%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G++ E+Y + +P+S + Y LL +K+EE+F ++K
Sbjct: 222 VAKVHGVYKAEKYIDSIPISHRGEIVYRTLLANCVSEANVKKSEEVFNKMKDLGFPVTVF 281
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K+A V+ +++++NV P +FTY L + + A +I ++K ++ M
Sbjct: 282 AINQLLLLYKRVDK-KKIADVLAKMEKENVKPSLFTYKLLVDTKGAIRDIAGMEKVVESM 340
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ G D + + YI A H AE + L E + L+ LYA LG
Sbjct: 341 QAE-GVEPDLLFQATIAKHYIFAGHREKAE-AILESMEGGDIKGNRNACKILLPLYAFLG 398
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ----WKQSATSD 234
KD ++++W+ + R C+ + S+ LG ++ ++ + WK + +S
Sbjct: 399 KKDDVERMWQVC-----EANPRLDECLSAIESFGRLGDVERAEKVFEDMFATWK-TLSSK 452
Query: 235 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
F N L+ ++D L +K E + + C
Sbjct: 453 F----YNALMKVYADQNLFKKGKELAKRMDEDGC 482
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 7 IHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ E+ FE + + KT S+ Y AL+ +YA +K +EL +R+ + +
Sbjct: 432 VERAEKVFEDMFATWKTLSSKFYNALMKVYADQNLFKKGKELAKRMDEDGCRLGISTIDS 491
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
++ LY+ G+V+K ++ ++ + N + P +Y + + + + +I +K D++
Sbjct: 492 LVKLYVGAGEVDKAESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFDQLR-Q 550
Query: 124 SGGSDDWVKYVNLVNIYITASHLV 147
G + +Y L+N Y+ A V
Sbjct: 551 MGYNGRVRQYQLLLNAYVHAKTPV 574
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 129/275 (46%), Gaps = 22/275 (8%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
M KV GI+ E++ + +P S + Y LL +KAEE+F ++K
Sbjct: 222 MAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNKMKDLGFPVTVF 281
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K++ V+ +++++V P +FTY L + + A+ +I+ ++K + M
Sbjct: 282 AINQLLLLYKRVDK-KKISDVLTMMEKEDVKPSLFTYKLLVDTKGASRDIEGMEKVVQSM 340
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ G + D + + YI H AE+ ++E+ + + ++ LYA LG
Sbjct: 341 EAE-GITPDLLLQATIAKHYIFGGHREKAEA--ILESMEGDMKENRNACKMVMPLYAFLG 397
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV-------GEIIDQWKQSATS 233
KD +++IWK + +R C LS+ G L +V G + WK ++
Sbjct: 398 KKDDVERIWKVC-----QSNTRLDEC-LSAIEAFGRLGDVEKAEEVFGNMFKTWKTLSSK 451
Query: 234 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
+ N ++ +++ L +K E + + C
Sbjct: 452 YY-----NAMMRVYANQNLMDKGKELAKRMEEDGC 481
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S+ Y A++ +YA +K +EL +R+++ + ++ LY+ G+VEK ++
Sbjct: 449 SSKYYNAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDSLVKLYVDAGEVEKAESLL 508
Query: 83 EEIKRKN-VVPDIFTYNLWISS 103
++ KN + P +Y + + S
Sbjct: 509 HKLSVKNKMKPQYSSYLMLLDS 530
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 128/269 (47%), Gaps = 4/269 (1%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
TK+ GI GE+ F +P+ ++ Y L+ + + E +++++ + L+
Sbjct: 117 TKLHGISHGEKLFSRIPVEFQSELLYNNLVIACLDKGVIKLSLEYMKKMRELGFPISHLV 176
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N ++ L+ S G+ + + ++ ++K V P + TYN+ + A N++ + K M
Sbjct: 177 FNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVKVFGRMK 236
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
++ + Y ++ I + L A + + EKSIT W T D L++LY LGN
Sbjct: 237 VAQVEPNE-ISYC-ILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGYLGN 294
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ +++++W +++ + S++Y+ + ++ +G L EI + K S + N
Sbjct: 295 QKELERVWATIQELPS-IRSKSYMLAIEAFGRIGQLNRAEEIWLEMK-STKGLKSVEQFN 352
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++ + G ++A + + + C P
Sbjct: 353 SMMSVYCKHGFIDRAAKLYKNMKASGCKP 381
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 15/262 (5%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
KV+G+H E+ E +P S + Y LL A +K+E++F R+K
Sbjct: 232 AKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLGFPVTQFS 291
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N+++ LY + + +K+A V+ +++++V P +FTY + + + + +I+ ++K ++ M
Sbjct: 292 FNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAMEKVIESME 350
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
DS D + YI AE + L E Q+ L+ L+A LGN
Sbjct: 351 KDS-IEPDLTFNATIARHYIFYGQREKAE-ALLKAMEGDDIQKNRAACKTLLPLHAFLGN 408
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID----QWKQSATSDFDI 237
D +++IWK+ + S + + ++ LG +++ ++ + WK + +S F
Sbjct: 409 SDAVERIWKACEDNTRVAES---VSAIEAFGKLGDVEKAEKVFEDMLVHWK-TLSSKF-- 462
Query: 238 SACNRLLGAFSDVGLTEKANEF 259
N LL ++D L +K E
Sbjct: 463 --YNALLKVYADHNLLDKGKEL 482
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E+ FE + + KT S+ Y ALL +YA +K +EL +R+ ++ + F A
Sbjct: 437 KLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAP 496
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVKKFLDE 119
+ ++ LY+ G+VEK +V ++ +N + I+ TY + S + ++ +K ++
Sbjct: 497 TLDALVKLYVEAGEVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNK 556
Query: 120 MSCDSGGSDDWVKYVNLVNIYITA 143
+ SG + Y L++ Y+ A
Sbjct: 557 LR-QSGYTGRIRMYQVLLHAYVRA 579
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 15/262 (5%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
KV+G+H E+ E +P S + Y LL A +K+E++F R+K
Sbjct: 232 AKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMKDLGFPVTQFS 291
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N+++ LY + + +K+A V+ +++++V P +FTY + + + + +I+ ++K ++ M
Sbjct: 292 FNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEAMEKVIESME 350
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
DS D + YI AE + L E Q+ L+ L+A LGN
Sbjct: 351 KDS-IEPDLTFNATIARHYIFYGQREKAE-ALLKAMEGDDIQKNRAACKTLLPLHAFLGN 408
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID----QWKQSATSDFDI 237
D +++IWK+ + S + + ++ LG +++ ++ + WK + +S F
Sbjct: 409 SDAVERIWKACEDNTRVAES---VSAIEAFGKLGDVEKAEKVFEDMLVHWK-TLSSKF-- 462
Query: 238 SACNRLLGAFSDVGLTEKANEF 259
N LL ++D L +K E
Sbjct: 463 --YNALLKVYADHNLLDKGKEL 482
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E+ FE + + KT S+ Y ALL +YA +K +EL +R+ ++ + F A
Sbjct: 437 KLGDVEKAEKVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAP 496
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVKKFLDE 119
+ ++ LY+ G+VEK +V ++ +N + I+ TY + S + ++ +K ++
Sbjct: 497 TLDALVKLYVEAGEVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNK 556
Query: 120 MSCDSGGSDDWVKYVNLVNIYITA 143
+ SG + Y +L++ Y+ A
Sbjct: 557 LR-QSGYTGRIRMYQSLLHAYVHA 579
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 13/271 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV GI+ E+Y E +P S + Y LL +K E++F ++K
Sbjct: 220 VAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVF 279
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K+ V+ ++++NV P +FTY L + + AT +I+ ++K + M
Sbjct: 280 SCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGATRDIEDMEKVIQAM 338
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D G D + + YI + AE + L + E F++ LYA LG
Sbjct: 339 QAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINENRSACKFVLPLYAFLG 396
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ-WKQSATSDFDI 237
K +++IWK ++ +R C+ + ++ LG +++ EI + +K T F+
Sbjct: 397 KKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEY 451
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
N +L +++ L +K E + C
Sbjct: 452 Y--NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 426 KLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPS 485
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 486 TLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 526
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 133/276 (48%), Gaps = 24/276 (8%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G+H E Y E +P S + Y LL +KAEE+F ++K
Sbjct: 234 IAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPLTPF 293
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY + +K+A V+ ++++NV P T+ + I + +ID + + +D+M
Sbjct: 294 ACNQLLLLYKRTDK-KKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQIVDQM 352
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
+ D++ K V LV YI+ H A+ L E E +++ + +W+ L+ LYA L
Sbjct: 353 RAEGIEPDNYTKAV-LVGHYISGGHDDKAK-MLLKEMEGENLKENRWVCR-LLLALYAKL 409
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE-------IIDQWKQSAT 232
G D++ ++WK + + + + + + + ++ G LK++ E + +WK ++
Sbjct: 410 GMADEVGRVWK---VCETRPSVEDCVAAIEAW---GKLKKIDEAEAVFEVMARKWKLTSK 463
Query: 233 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
+ C+ LL +++ + K + + K C
Sbjct: 464 N------CSVLLNVYANNKMLTKGKDLIKRMAHKGC 493
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
K+ I E FE + K TS+ + LL++YA K K ++L +R+ L
Sbjct: 440 KLKKIDEAEAVFEVMARKWKLTSKNCSVLLNVYANNKMLTKGKDLIKRMAHKGCRIGPLT 499
Query: 62 YNEMMTLYMSVGQVEKVALVVEE-IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N ++ LY+ G+VEK V+++ I++ V P +YN + + +I +K M
Sbjct: 500 WNALVKLYVQAGEVEKADSVLQKAIQQSPVRPIFSSYNTLLEEYSKRGDIHNSEKIFYRM 559
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 36/298 (12%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+H E Y +P S + + ALL Y A EKAEE+F ++K +
Sbjct: 220 IAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDLEFPMSIF 279
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN+M+ LY + + K+A V+ ++++N+ P FTY + I + +I +++ +D M
Sbjct: 280 AYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGMEQVVDSM 338
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ G D L Y++ V A++ E + QW+ L+ Y L
Sbjct: 339 KAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLC-RILLPFYGKLQ 396
Query: 181 NKDKIDQIWKSL------------------------------RMTK--QKMTSRNYICIL 208
+D++ ++W+ R+ K +K+++R+Y ++
Sbjct: 397 MEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKLSARHYSIMM 456
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+ Y L + E+++Q +S D+ CN ++ + + G EKA+ F + ++K
Sbjct: 457 NVYRDSKMLTKGKEVVNQMAESGCH-IDLLTCNAIVKLYVEAGEVEKADSFLVKAVKK 513
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALV 81
++ Y+ ++++Y +K K +E+ ++ +S + L N ++ LY+ G+VEK + +
Sbjct: 448 SARHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKADSFL 507
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
V+ +K+ + P +Y + A ++ +K D+M S
Sbjct: 508 VKAVKKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSS 550
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 13/271 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV GI+ E+Y E +P S + Y LL +K E++F ++K
Sbjct: 220 VAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVF 279
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K+ V+ ++++NV P +FTY L + + A +I+ ++K + M
Sbjct: 280 SCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAM 338
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D G D + + YI + AE + L + E F++ LYA LG
Sbjct: 339 QAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINENRSACKFVLPLYAFLG 396
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ-WKQSATSDFDI 237
K +++IWK ++ +R C+ + ++ LG +++ EI + +K T F+
Sbjct: 397 KKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEY 451
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
N +L +++ L +K E + C
Sbjct: 452 Y--NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 426 KLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPS 485
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 486 TLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 526
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKV+G+ YF+ +P K + Y +LL YA A EKAEELFE+++ ++ ++
Sbjct: 54 ITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMGMA-SSY 112
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN----------LWISSCAATLNI 110
YN MM LY+ GQVE+V + + ++ +VPD+ T + +++ +I
Sbjct: 113 AYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDI 172
Query: 111 DQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++ L++ SC+S Y+ + + + + +V AE + K + +
Sbjct: 173 KAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLI- 224
Query: 170 DFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ L+ Y G DK +DQ K RM + + Y +G + + ++
Sbjct: 225 NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFKVGQVSKAADLTK 280
Query: 226 QWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+ SA++++ N L L F++ E A E M LLQ+ PT
Sbjct: 281 KALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MSLLQRLVTPTR 328
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 31/288 (10%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKV+G+ YF+ +P K + Y +LL YA A EKAEELFE+++ ++ ++
Sbjct: 23 ITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMGMA-SSY 81
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN----------LWISSCAATLNI 110
YN MM LY+ GQVE+V + + ++ +VPD+ T + +++ +I
Sbjct: 82 AYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDI 141
Query: 111 DQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++ L++ SC+S Y+ + + + + +V AE + K + +
Sbjct: 142 KAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLI- 193
Query: 170 DFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ L+ Y G DK +DQ K RM + + Y +G + + ++
Sbjct: 194 NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFKVGQVSKAADLTK 249
Query: 226 QWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPT 271
+ SA++++ N L L F++ E A E M LLQ+ PT
Sbjct: 250 KALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MSLLQRLVTPT 296
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 13/271 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV GI+ E+Y E +P S + Y LL +K E++F ++K
Sbjct: 200 VAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVF 259
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K+ V+ ++++NV P +FTY L + + A +I+ ++K + M
Sbjct: 260 SCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAM 318
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D G D + + YI + AE + L + E F++ LYA LG
Sbjct: 319 QAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINENRSACKFVLPLYAFLG 376
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ-WKQSATSDFDI 237
K +++IWK ++ +R C+ + ++ LG +++ EI + +K T F+
Sbjct: 377 KKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEY 431
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
N +L +++ L +K E + C
Sbjct: 432 Y--NAMLKVYANKKLFDKGKELAKRMGDDGC 460
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 406 KLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPS 465
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 466 TLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLML 506
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 31/288 (10%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKV+G+ YF+ +P K + Y +LL YA A EKAEELFE+++ ++ ++
Sbjct: 82 ITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMGMA-SSY 140
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN----------LWISSCAATLNI 110
YN MM LY+ GQVE+V + + ++ +VPD+ T + +++ +I
Sbjct: 141 AYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDI 200
Query: 111 DQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++ L++ SC+S Y+ + + + + +V AE + K + +
Sbjct: 201 KAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLI- 252
Query: 170 DFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ L+ Y G DK +DQ K RM + + Y +G + + ++
Sbjct: 253 NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFKVGQVSKAADLTK 308
Query: 226 QWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPT 271
+ SA++++ N L L F++ E A E M LLQ+ PT
Sbjct: 309 KALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MSLLQRLVTPT 355
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 5/268 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TK+ GI GE+YF +P + Y LL Y+ EKAEE+F+++K S A
Sbjct: 208 ITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMKAEGFSLTAF 267
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN+++ LY + + +K+ V++ ++ + V P IFTY + I +I +++ + M
Sbjct: 268 EYNQLLLLYKRLDK-KKIQDVLKMMEDEGVKPTIFTYKILIDVKGWMGDIGGMEQVAENM 326
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ D + L YI A AE L E E + + L+ LYA LG
Sbjct: 327 KSEDIEMDSGTLEL-LARHYIRAGLAEKAE-VVLKELENVSLKDKRSRLKMLLPLYAELG 384
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++++IWK + Y + ++ LG + E EI + ++
Sbjct: 385 KPTEVERIWKDFEAFPA-LRLDEYATGVVAWGKLGQI-EKAEITFEKLLNSGKKLSAKHY 442
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNC 268
N LL ++D L K E + C
Sbjct: 443 NALLNVYADHHLLLKGKELVKRMSDNGC 470
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ I E FE L S K +++ Y ALL++YA K +EL +R+ + +
Sbjct: 416 KLGQIEKAEITFEKLLNSGKKLSAKHYNALLNVYADHHLLLKGKELVKRMSDNGCTIEPP 475
Query: 61 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+++ ++ L+++ G++EK +++ + +K + P +T + A ++ +K D
Sbjct: 476 IWDALIRLHVNAGELEKADSILFKACNQKQLRPKYWTMVTILEKYAERGDVANAEKIFDR 535
Query: 120 M 120
M
Sbjct: 536 M 536
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKV+G+ YF+ +P K + Y +LL YA A EKAEELFE+++ ++ ++
Sbjct: 133 ITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMGMA-SSY 191
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN----------LWISSCAATLNI 110
YN MM LY+ GQVE+V + + ++ +VPD+ T + +++ +I
Sbjct: 192 AYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDI 251
Query: 111 DQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++ L++ SC+S Y+ + + + + +V AE + K + +
Sbjct: 252 KAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLI- 303
Query: 170 DFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ L+ Y G DK +DQ K RM + + Y +G + + ++
Sbjct: 304 NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFKVGQVSKAADLTK 359
Query: 226 QWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+ SA++++ N L L F++ E A E M LLQ+ PT
Sbjct: 360 KALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEM-MSLLQRLVTPTR 407
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 13/271 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV GI+ E+Y E +P S + Y LL +K E++F ++K
Sbjct: 35 VAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDLGFPVTVF 94
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K+ V+ ++++NV P +FTY L + + A +I+ ++K + M
Sbjct: 95 SCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAM 153
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D G D + + YI + AE + L + E F++ LYA LG
Sbjct: 154 QAD-GIEPDLLIQATIARHYIFGGYREKAE-AILEQIEGDDINENRSACKFVLPLYAFLG 211
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ-WKQSATSDFDI 237
K +++IWK ++ +R C+ + ++ LG +++ EI + +K T F+
Sbjct: 212 KKADVERIWKVC-----EVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEY 266
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
N +L +++ L +K E + C
Sbjct: 267 Y--NAMLKVYANKKLFDKGKELAKRMGDDGC 295
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E FE + + KT E Y A+L +YA K +K +EL +R+
Sbjct: 241 KLGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPS 300
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF-TYNLWISSCAATLNIDQVKKFLDE 119
+ ++ LY G+VEK ++ ++ KN + ++ TY + + S + ++ +K +
Sbjct: 301 TLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSK 360
Query: 120 MSCDSGGSDDWVKYVNLVNIYITA 143
+ G + +Y L+ Y+ A
Sbjct: 361 VR-QMGYTGRIRQYQLLLEAYLNA 383
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 19/274 (6%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K I+ E+Y E +P S + Y LL +KAE++F ++K +
Sbjct: 220 VAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPVSVF 279
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K+ V+ ++++NV P +FTY L + + A +I+ ++K + M
Sbjct: 280 SCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAM 338
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D G D + + YI + AE+ I + + F++ LYA LG
Sbjct: 339 QAD-GIEPDLLFQATIARHYIFGGYREKAEAILEQMVGDDINENRSAC-KFVLPLYAFLG 396
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ----WKQSATSD 234
D +++IWK + +R C+ + ++ LG +++ EI D WK ++
Sbjct: 397 KNDDVERIWKVC-----EANARLDECMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLSSKY 451
Query: 235 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
+ N +L +++ L +K E + C
Sbjct: 452 Y-----NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E F+ + + KT S+ Y A+L +YA K +K +EL +R+
Sbjct: 426 KLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPY 485
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 486 TLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPMYTTYLML 526
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 70/118 (59%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+V G+ E YF+ +P K + + ALL+ YA K +KA +++K+ + + L Y
Sbjct: 109 RVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPY 168
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N MM LY +G+ E++ +++E+K + V D FTY++ IS+ AA + ++K +++M
Sbjct: 169 NIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQM 226
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF-NA 59
++KV G+ E+YF P S ++ + Y ALL+ Y+ K EKAE + + ++ ++ F
Sbjct: 113 ISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMR--DMGFVKT 170
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L YN M+ LY +G+ EK+ +++E++ + D FTY + +++ AT +++ ++K L +
Sbjct: 171 LSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMK 230
Query: 120 MSCDSGGSDDWVKYVNLVNIYITA 143
+ D + DW Y+ N Y+ A
Sbjct: 231 LETDPAVNSDWNAYIVAANGYLKA 254
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 14/274 (5%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
TK+ GI GE+ F +P + Y L+ + E +++++ + L+
Sbjct: 131 TKLHGISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLEYMKKMRELGHPISHLI 190
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N ++ L+ S G+ + + ++ ++K VV + TYN+ + A N++ + K EM
Sbjct: 191 FNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEANEHNVEGLIKVFGEMK 250
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLG 180
++ V + L + A AE+ VEA EKS T W T D LIILY L
Sbjct: 251 RLEVEPNE-VSFCILAIAHAVARLYTVAEA--YVEAVEKSYTGDNWSTLDVLIILYGYLR 307
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFD 236
K+D+IW +++ + S++YI + ++ +G L E+ + K +T F
Sbjct: 308 KGKKLDRIWGTVKELPH-VRSKSYILAIEAFGRIGQLGRAEELWLEMKSLKGLKSTEQF- 365
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N +L + GL +KA + + + C P
Sbjct: 366 ----NSMLSIYCKCGLVKKATDIFREMDRNGCKP 395
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 6 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
GI +Y + +P + Y LL A+ +KAEE+F ++ +L N+M
Sbjct: 191 GIEDARKYIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFREIRDLSLPLTVSACNQM 250
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
+ LY V + KVA ++ ++++N+ P FTY L I + +I V+ L+EM +G
Sbjct: 251 ILLYKRVART-KVADIIMLMEKENIKPSPFTYKLIIDLKGRSNDISGVEVTLNEMKA-AG 308
Query: 126 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
D+V + YI+ L+ + + E E + + L+ LYA L D++
Sbjct: 309 VEPDFVTQTMVAKFYISGG-LIEKAKAVVSEIEMEYMKDKRHAVRSLLHLYAALSKPDEV 367
Query: 186 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 245
+IWK T+ K+ +++ + ++ LG +++ E + + AT N +L
Sbjct: 368 ARIWKLC--TEPKLD--DFMAAIEAWGKLGCIEQAEETFEAMLE-ATQKLSSKYYNGMLN 422
Query: 246 AFSDVGLTEKANEF 259
+++ L +K +F
Sbjct: 423 VYAENKLMDKGKKF 436
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 97 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 156
YN ++ A +D+ KKF++ MS D G + + + LV +Y+ + + A+S
Sbjct: 417 YNGMLNVYAENKLMDKGKKFVERMSFD-GCPNGPLTWDALVKLYVNSGEVAKADSFLQNA 475
Query: 157 AEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 212
E++ +R + +Y +L++ YA +G+ ++++ L+ + Y +L +Y+
Sbjct: 476 TEQNPDRRPTYGSYIYLLMAYAKMGDIYNAEKMFDRLKNIRYPGRKPPYPVLLEAYV 532
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 19/274 (6%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K I+ E+Y E +P S + Y LL +KAE++F ++K +
Sbjct: 220 VAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPVSVF 279
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K+ V+ ++++NV P +FTY L + + A +I+ ++K + M
Sbjct: 280 SCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAM 338
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
D G D + + YI + +E+ I + + F++ LYA LG
Sbjct: 339 QAD-GIEPDLLFQATIARHYIFGGYREKSEAILEQMVGDDINENRSAC-KFVLPLYAFLG 396
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICI--LSSYLMLGHLKEVGEIIDQ----WKQSATSD 234
D +++IWK + +R C+ + ++ LG +++ EI D WK ++
Sbjct: 397 KNDDVERIWKVC-----EANARLDECMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLSSKY 451
Query: 235 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
+ N +L +++ L +K E + C
Sbjct: 452 Y-----NAMLKVYANKKLFDKGKELAKRMGDDGC 480
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKT--SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E F+ + + KT S+ Y A+L +YA K +K +EL +R+
Sbjct: 426 KLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPY 485
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+ ++ LY G+VEK ++ ++ KN + ++T L +
Sbjct: 486 TLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPMYTTYLML 526
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 73/130 (56%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++K G+ E YF + S++ + Y ALLH Y K +KAE + +++++ L
Sbjct: 114 ISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKTPL 173
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN M+ LY +G+ EK+ +V+E++ + + FTYN+ +++ AA +I ++K L +M
Sbjct: 174 SYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRMNAYAAASDITNMEKLLSKM 233
Query: 121 SCDSGGSDDW 130
D + DW
Sbjct: 234 EADPLVATDW 243
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + + Y ALL Y K EKAE +++++ + + ++ YN ++ LY G
Sbjct: 103 VPWTXAGXDAYGALLSGYVREKSVEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHG 162
Query: 77 KVALVVEEIKRKNVVPDIFT-YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
K+ +++E++ K + D FT NL ++ AA+ +I ++K L+ M D S DW Y
Sbjct: 163 KIEALIQEMQXKAIPCDAFTVXNLMVAYVAAS-DISAMEKXLNRMEEDPHISVDWNIYSV 221
Query: 136 LVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
+ Y+ + A E +E+ + +R + L+ LYA +K ++ ++W +
Sbjct: 222 AASGYLKVGLIDKALEMLKKIESNRPHLERX-SAFKXLLSLYARTXHKQELYRVWNLYKP 280
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
+ + Y C+++ L ++ +I +W+ T +D NRLL A+ L +
Sbjct: 281 SYE--YPEAYSCMITCLTKLDDIEGAEKIFQEWECECTM-YDFRVLNRLLSAYCKRCLFD 337
Query: 255 KA 256
KA
Sbjct: 338 KA 339
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 31/289 (10%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+TKV G+ YF+ +P K + Y +LL YA A EKAEELFE+++ ++ ++
Sbjct: 161 ITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMGMA-SSY 219
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN----------LWISSCAATLNI 110
YN MM LY+ GQVE+V + + ++ +VPD+ T + +++ +I
Sbjct: 220 AYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDI 279
Query: 111 DQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++ L++ SC+S Y+ + + + + +V AE + K + +
Sbjct: 280 KAIENVLEKANSCNS-------MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLI- 331
Query: 170 DFLIILYAGLGNKDK----IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ L+ Y G DK +DQ K RM + + Y +G + + ++
Sbjct: 332 NLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYK----LAGGYFKVGQVSKAADLTK 387
Query: 226 QWKQSATSDFDISACNRL--LGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+ SA++++ N L L F++ E A E LLQ+ PT
Sbjct: 388 KALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMAS-LLQRLITPTR 435
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 37/259 (14%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALM 61
V G+ E++F+ +P + K YT+LL YA G KAE FE++++ +
Sbjct: 124 VLGLEEAEKFFQSIPENLKGESIYTSLLKSYAKSGEISLRKAEYTFEKMRKLGMLLRPSP 183
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN M++LY S+ KV ++ E+K N+ D T N + AA ++ + KFL
Sbjct: 184 YNSMVSLYSSLRNRNKVDEILREMKENNLELDSPTVNNALRVYAAVCDVATMDKFL---- 239
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
DW + + E T +E K+ LI LY G
Sbjct: 240 ------ADW-------------NAITTLEWLTTLEMAKAYR---------LIRLYGEAGE 271
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI-IDQWKQSATSDFDISAC 240
++ + +IW + TK+K + + ++ S L L + +I D+W+ S +FD+
Sbjct: 272 REDVYRIWDLYKNTKEK-DNEGFRALIGSLLKLDDINGAEKIYYDEWESSGL-EFDLRIP 329
Query: 241 NRLLGAFSDVGLTEKANEF 259
L+ + G+ +KA++
Sbjct: 330 TMLMSGYRAKGMVKKADKL 348
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 1 MTKVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKWT-EKAEELFERVKQSNLSFN 58
+ KV G+ E++FE +P + K Y LL Y + T KAE +FE++++
Sbjct: 424 IEKVLGLEEAEKFFESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVFEKMRELGFLSK 483
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 90
+N +++LY+ ++ KV ++ ++K+ N+
Sbjct: 484 LSPFNSIISLYIEQRKLSKVNKLLCDMKQNNI 515
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 12/258 (4%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+ G+ GE+ F +P + Y L+ A E +++++ + L+Y
Sbjct: 145 KLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVY 204
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ + G+ + +A + +K P + TY++ + A NID V K D M
Sbjct: 205 NRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMK- 263
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+G + V Y L + A AE+ T E EKSIT W T D L+ILY LG +
Sbjct: 264 KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKSITGDNWSTLDILMILYGRLGKE 322
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFDIS 238
++ + W +R + S++Y+ ++ +G+L E+ + K T F
Sbjct: 323 KELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQF--- 378
Query: 239 ACNRLLGAFSDVGLTEKA 256
N LL + GL EKA
Sbjct: 379 --NSLLSVYCKDGLIEKA 394
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 124/272 (45%), Gaps = 15/272 (5%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E Y +P S + + LL Y A +KAEE+F ++K
Sbjct: 214 IAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFPMTPF 273
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+++M+ LY + + K+A ++ ++++NV P FTY + I + +I +++ +D M
Sbjct: 274 AHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQVVDSM 332
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ D V ++L+ + ++ L + L + E++ ++ + L+ LY L
Sbjct: 333 KAEGIKPD--VSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLYGALQ 390
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ----WKQSATSDFD 236
+D++ ++WK S + + ++ L +++E +I D+ WK+ +T +
Sbjct: 391 MEDEVRRLWKICEANPHMEES---MAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTRHY- 446
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
N ++ + + K E + + C
Sbjct: 447 ----NTMMNVYGGSKMLTKGKELVNQMAESGC 474
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E+ F+ + K T Y ++++Y G+K K +EL ++ +S + L
Sbjct: 420 KLKNVQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDEL 479
Query: 61 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
++ ++ LY+ G+VEK + +V+ + + P TY + A+ ++ V+K
Sbjct: 480 TWDAVVKLYVEAGEVEKADSFLVKAVLQNKKKPMFTTYITLMDRYASRGDVPNVEK 535
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM--SVGQVEKVALVVEE 84
Y +LLH Y + E A ELF +KQ + + YN +M +Y+ VG + KV + +E
Sbjct: 48 YNSLLHAYCKSGQVETANELFNSMKQKDCRPDLSTYNTIMNMYVKTDVG-LTKVLSLFKE 106
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA- 143
+ + + PD+ +Y++ +++CA ++ + ++ D M G V Y +L+ +Y A
Sbjct: 107 MCLQGIQPDVVSYDILLAACAPKQHVKEAQRIFDTMKKRRGIKPTVVTYTSLITVYANAG 166
Query: 144 ---------------------------SHLVNA--------ESSTLVEAEKSI-TQRQWI 167
+ L+N+ E+ T+ EA K + +
Sbjct: 167 IYSSPNQLCPLFGEMVAEKCQPNVKTFTSLINSCRKGGHVEEAQTIFEAMKEYGVKPNVV 226
Query: 168 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
TY+ LI +Y G +D +++ + + + T ++ ++SS+ G KE
Sbjct: 227 TYNALINVYTERGEQDGAQRVFLQMVQSGLQPTGVSFTVLMSSFKATGAFKE 278
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 8/247 (3%)
Query: 13 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 72
+ EG +S TY+ L+ Y + E A+++ E ++++ S N + YN ++
Sbjct: 233 FMEGAGISPDVY-TYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291
Query: 73 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 132
G +E+ +E++ +VPD FTY I+ DQ K LDEMSC +G + V
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC-AGLMPNVVV 350
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSIT--QRQWITYDFLIILYAGLGNKDKIDQIWK 190
Y L++ ++ NA+ + + E S Q ITYD LI LG + +I K
Sbjct: 351 YSTLIDGFMRQG---NADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
+ + Y ++ +L + +E ++++ ++ S ++ + ++ +
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISP-NVYTYSIIINGLCQI 466
Query: 251 GLTEKAN 257
G +E+A+
Sbjct: 467 GESERAS 473
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ +++ +E+A L E++ L NA +Y +++ Y G ++++
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+N+ PD++ YN I + +D+ ++ DEM + G + Y L++ Y A +
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM-LEKGFQPNDFTYGGLIHGYSMAGN 573
Query: 146 LVNAE 150
L AE
Sbjct: 574 LEKAE 578
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 5/207 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+H Y+ A EKAE+L ++ S L+ N +Y +++ Y +EKV+ ++ +
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++PD Y + I + +++ ++ L + +G D + Y +L++ + A+
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIE-KNGLVPDSLIYGSLISGFCKAAD 678
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L E K + Y+ LI + + I+ S+ Y
Sbjct: 679 MEKA-VGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYT 737
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSAT 232
++ Y G +++ ID + + T
Sbjct: 738 TLIDGYCKAGDIRDA---IDLYNEMLT 761
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y ++H + + + A + ++++ L ++L+Y +++ + +EK +++E+
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+K + P I YN I + +I + + + C G + V Y L++ Y A +
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIIC-KGLPPNCVTYTTLIDGYCKAGDI 749
Query: 147 VNA---ESSTLVEAEKSITQRQWITYDFLI--ILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+A + L E + D + +L AG N + Q +L +T ++M +
Sbjct: 750 RDAIDLYNEMLTEG---------VAPDAFVYSVLAAGCSNSGDLQQ---ALFIT-EEMIA 796
Query: 202 RNYICILSSYLMLGH 216
R Y I+SS+ L H
Sbjct: 797 RGY-AIISSFNTLVH 810
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 103/247 (41%), Gaps = 3/247 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +A + +++ + + + YN ++ ++ E+ L++ E+
Sbjct: 385 TYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM 444
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ + P+++TY++ I+ ++ L++M D + +V Y L++ Y
Sbjct: 445 RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFV-YAPLISGYCREGS 503
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A TL + + Y+ LII + +G D+ + + + + Y
Sbjct: 504 FSLA-CETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYG 562
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ Y M G+L++ +++ Q S + D L G F L EK + +L+
Sbjct: 563 GLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL-EKVSSTLKSMLE 621
Query: 266 KNCAPTN 272
K P N
Sbjct: 622 KGLMPDN 628
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 12/259 (4%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
K+ G+ GE+ F +P + Y L+ A E +++++ + L+
Sbjct: 165 VKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLV 224
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN ++ + G+ + +A + +K P + TY++ + A NID V K D M
Sbjct: 225 YNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMK 284
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+G + V Y L + A AE+ T E EKSIT W T D L+ILY LG
Sbjct: 285 -KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKSITGDNWSTLDILMILYGRLGK 342
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFDI 237
+ ++ + W +R + S++Y+ ++ +G+L E+ + K T F
Sbjct: 343 EKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQF-- 399
Query: 238 SACNRLLGAFSDVGLTEKA 256
N LL + GL EKA
Sbjct: 400 ---NSLLSVYCKDGLIEKA 415
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 11/261 (4%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
++ + ER FE L ++ Y ALL Y K +AE LF+ +K + +
Sbjct: 744 SRCGSVGKAERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAERLFKELKATGTISSCYS 803
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
N + ++Y +G +V ++ +E ++ V D+ YNL + + +++V+K ++
Sbjct: 804 LNLLASMYRQLGLDAEVLMLAKEAQKLGVELDMCFYNLLLPAKFRVQGLEEVEKLYATIT 863
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE-----AEKSITQRQWITYDFLIILY 176
+ + + + NIY++A N + ++E E +Q Y+ LI +Y
Sbjct: 864 SPRDRT-RFFTCLAMANIYVSAGR--NDKVLEMLELIDQGMEAGTIVKQRRRYNVLISMY 920
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
A L + ++++ W+ L+ +Q T +Y CI+ ++ LGH+ E I Q ++
Sbjct: 921 ASLEDGARVERTWERLKQQRQPNTE-DYCCIIRAWGKLGHVVR-AETIFQVAEANEKSLK 978
Query: 237 ISAC-NRLLGAFSDVGLTEKA 256
S N ++ +S G+ E+A
Sbjct: 979 YSTVFNAMMFVYSVAGMREEA 999
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 123/264 (46%), Gaps = 22/264 (8%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 66
I ++ F+ L KT++ Y + +++ K A++ + + K++ L N + ++ +
Sbjct: 162 IRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDITFSILA 221
Query: 67 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
LY G KV + E+I+ + P + N + S I ++ +++ G
Sbjct: 222 CLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQLV--PAG 279
Query: 127 SDDWVKYVNLVNIYITASHLVNA----ESSTLVEA-EKSITQRQWI----TYDFLIILYA 177
SD +K +L + A+ ++A ++ L+E EK++ Q + TY LI +Y+
Sbjct: 280 SD--LKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHILISMYS 337
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-- 235
+ N+D ++++WK + + + +++Y+ ++ S G EVG +K++
Sbjct: 338 TMKNRDGMERVWKKI----EDLKAQDYVAMIES---CGRADEVGSAEKYFKEADRKGLLN 390
Query: 236 DISACNRLLGAFSDVGLTEKANEF 259
S LLG ++ G +KA +
Sbjct: 391 QPSLFAALLGVYAGKGQADKAEKL 414
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 43 AEELFERV-------KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR---KNVVP 92
AEE+F ++ K+S+LS Y+ M Y+S G +K ++E I++ + P
Sbjct: 268 AEEIFNQLVPAGSDLKRSHLS----TYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFP 323
Query: 93 DIF-TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 151
+ TY++ IS + N D +++ ++ D D YV ++ A + +AE
Sbjct: 324 KLRRTYHILISMYSTMKNRDGMERVWKKIE-DLKAQD----YVAMIESCGRADEVGSAEK 378
Query: 152 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 211
EA++ Q + L+ +YAG G DK ++++K + K++ SR+ +C Y
Sbjct: 379 -YFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKM---KEQDVSRDALCY--HY 432
Query: 212 LMLGHL--KEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
++L +L K + ++ + + + LG F DV
Sbjct: 433 IILANLNAKNIDRAVEILELAEAAGMRDGRSRPFLGTFCDV 473
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 7 IHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ S E+YF+ ++ + ALL +YAG +KAE+LF+++K+ ++S +AL Y+
Sbjct: 373 VGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHY 432
Query: 65 MMTLYMSVGQVEKVALVVE 83
++ ++ +++ ++E
Sbjct: 433 IILANLNAKNIDRAVEILE 451
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+ G+ +GE Y + +P S K Y LL A +K+E +F R+K +
Sbjct: 209 KIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSELVFNRMKDLGFPLSGFTC 268
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
++M+ LY + + +K+A V+ ++++NV P + TY + I AT +I +++ L+ M
Sbjct: 269 DQMLLLYKRIDR-KKIADVLLLMEKENVKPSLLTYKILIDVKGATNDISGMEQILETMK- 326
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
D G D+ + L + + + L L E E + + L+ +YA LG +
Sbjct: 327 DEGVQPDF-QTQALTAKHYSGAGLKEKAEKVLKEMEGESLEANRRAFKDLLSIYASLGRE 385
Query: 183 DKIDQIWK 190
D++ +IWK
Sbjct: 386 DEVTRIWK 393
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E FE + + +S TY+ LL +Y K K ++L +R+ +S A
Sbjct: 413 KLNKVQEAEAIFEKIVTMGRRASSNTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEAT 472
Query: 61 MYNEMMTLYMSVGQVEKV 78
++ ++ LY+ G+VEK
Sbjct: 473 TWDALIKLYVEAGEVEKA 490
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 95/239 (39%), Gaps = 42/239 (17%)
Query: 34 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 93
Y+GA EKAE++ + ++ +L N + +++++Y S+G+ ++V + + + K
Sbjct: 344 YSGAGLKEKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVTRIWKICESK----P 399
Query: 94 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN----- 148
F +L LN Q + + E G Y L+ +Y+ L
Sbjct: 400 YFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRASSNTYSVLLRVYVDHKMLSKGKDLV 459
Query: 149 ---AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW-KSLRMTKQKMTSRNY 204
AES +EA T+D LI LY G +K D + K+ + + K+ ++
Sbjct: 460 KRMAESGCRIEA---------TTWDALIKLYVEAGEVEKADSMLDKASKQSHTKLMMNSF 510
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ I+ Y G D+ ++ +VG T + +F LL
Sbjct: 511 MYIMDEYSKRG--------------------DVHNTEKIFLKMREVGYTSRLRQFQALL 549
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+FG+ ++++E +TYT LL L K E+A LFE + L + +Y
Sbjct: 112 KIFGLLRQQQWYE------PRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVY 165
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+++ Y G + K V+E+K + PD+ TY++ I C D +KK L +MS
Sbjct: 166 TALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMS 225
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
C G + + V Y ++N + A ES L E IT++ I Y
Sbjct: 226 C-LGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQ 284
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+K+++ +K ++ + Y ++SSY G ++ +++ ++ S I N
Sbjct: 285 IEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSP-TIVTMN 343
Query: 242 RLLGAFSDVGLTEKANEF 259
++ +F G E+ E+
Sbjct: 344 TIIDSFGRAGNIEEMEEY 361
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 39/246 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY +++ + AK E+ E L E ++ + + + +N + Y + Q+EK+ +E
Sbjct: 235 TYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKE 294
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + PDI+TYN ISS D++K L+ M
Sbjct: 295 FQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFM------------------------ 330
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
EK +T + +I + GN +++++ +K+++ K S Y
Sbjct: 331 -------------EKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTY 377
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++++Y G L++V I+ Q + S D N L+ + G K E + +
Sbjct: 378 CSLVNAYGKSGDLEKVDSILRQIENSDVVP-DTPLFNCLINVYGQAGNVRKMGELFLEMK 436
Query: 265 QKNCAP 270
+ C P
Sbjct: 437 ENKCVP 442
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 7 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
I E YF+ + S TY +L++ Y + EK + + +++ S++ + ++N
Sbjct: 355 IEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNC 414
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 106
++ +Y G V K+ + E+K VPD T+ I + A
Sbjct: 415 LINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKA 456
>gi|147819559|emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
A AK E++ E KQ N + ++TLY G E + +E+ + N +
Sbjct: 181 AKAKKFSFIEDILEHQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEMPKLNCERTV 240
Query: 95 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 154
++N +S+C + D++ F E+ + G D V Y LVN + L +A S L
Sbjct: 241 MSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSLDSA-LSVL 299
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
E EK + IT++ L+ ++ G+ ++IW ++ R+Y L +
Sbjct: 300 DEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRGVISE 359
Query: 215 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+ E +ID+ K S D+ N L+ F + G E+A +H + P A+
Sbjct: 360 NRMSEAVNLIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWHSEIAINELPPVRAT 418
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 54/98 (55%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL+++ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 313 TFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVNLIDEM 372
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
K + PD+FT N + N+++ K++ E++ +
Sbjct: 373 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWHSEIAIN 410
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 124/272 (45%), Gaps = 15/272 (5%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E Y +P S + + LL Y A +KAEE+F ++K
Sbjct: 218 IAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFPMTPF 277
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+++M+ LY + + K+A ++ ++++NV P FTY + I + +I +++ +D M
Sbjct: 278 AHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQVVDSM 336
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ D V ++L+ + ++ L + L + E++ ++ + L+ LY L
Sbjct: 337 KAEGIKPD--VSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLYGALQ 394
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ----WKQSATSDFD 236
+D++ ++WK S + + ++ L +++E +I D+ WK+ +T +
Sbjct: 395 MEDEVRRLWKICEANPHMEES---MAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTRHY- 450
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
N ++ + + K E + + C
Sbjct: 451 ----NTMMNVYGGSKMLTKGKELVNQMAESGC 478
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E+ F+ + K T Y ++++Y G+K K +EL ++ +S + L
Sbjct: 424 KLKNVQEAEKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDEL 483
Query: 61 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
++ ++ LY+ G+VEK + +V+ +++ + P +Y + A ++ +K D+
Sbjct: 484 TWDAVVKLYVEAGEVEKADSFLVKAVQKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDK 543
Query: 120 MSCDSGGSDDWVKYVNLVNIYITA 143
M SG ++ L+ Y+ +
Sbjct: 544 M-IQSGFVPRLGQFGTLLQAYVNS 566
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 12/258 (4%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+ G+ GE+ F +P + Y L+ A E +++++ + L+Y
Sbjct: 147 KLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVY 206
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ + G+ + +A + +K P + TY++ + A NID V K D M
Sbjct: 207 NRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMK- 265
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+G + V Y L + A AE+ T E EKS+T W T D L+ILY LG +
Sbjct: 266 KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKSVTGNNWSTLDILMILYGRLGKE 324
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFDIS 238
++ + W +R + S++Y+ ++ +G+L E+ + K T F
Sbjct: 325 KELVRTWNVIRGF-HHVRSKSYLLATEAFAQVGNLDRAEELWLEMKNVRGLKETEQF--- 380
Query: 239 ACNRLLGAFSDVGLTEKA 256
N LL + GL EKA
Sbjct: 381 --NSLLSVYCKDGLIEKA 396
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 134/281 (47%), Gaps = 14/281 (4%)
Query: 1 MTKVFGIHS----GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 54
M ++ G S + F+ +PL + YT +LH Y+ +A E+FER+ +S
Sbjct: 193 MVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESG 252
Query: 55 LSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 113
LS + + YN M+ +Y +G+ +K+ +++E++ + + D FT + +S+C ID+
Sbjct: 253 LSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEA 312
Query: 114 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
++F + + G V Y L++++ A + + S L E E++ +TY+ ++
Sbjct: 313 REFFSGLKSE-GYKPGTVTYNALLHVFGKAG-IFSEALSVLSEMEENNCPPDAVTYNEVV 370
Query: 174 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y G ++ + ++ + Y I+++Y +G + + E+ DQ +
Sbjct: 371 AAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCV 430
Query: 234 DFDISACNRLLGAFSDVGLTEKANEF--HMLLLQKNCAPTN 272
+++ N +LG L+E+ + HM L C+P +
Sbjct: 431 P-NVATYNAVLGMLGKKSLSEEMMKILGHMKL--NGCSPNH 468
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 7 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
I +F GL + TY ALLH++ A +A + ++++N +A+ YNE
Sbjct: 309 IDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNE 368
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ Y+ G E+ A+V++ + K ++P+ TY I++ +ID+ + D+M +
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQM-MEL 427
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
G + Y N V + L L + + IT++ ++ + G
Sbjct: 428 GCVPNVATY-NAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKY 486
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 244
++Q+++ ++ + + ++S+Y G + ++ ++ ++ S I+ N LL
Sbjct: 487 VNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPC-INTYNALL 545
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
A + G + A + + K P+ S
Sbjct: 546 NALARRGDWKAAESVILDMRNKGFRPSETS 575
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +L+ +YA KAEE+ ++ S + + YN ++ + G +++ ++ E+
Sbjct: 680 THNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEM 739
Query: 86 KRKNVVPDIFTYNLWISSCAA 106
V P IFTYN +IS AA
Sbjct: 740 TSIGVGPCIFTYNTFISGYAA 760
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 3/190 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+H E Y +P S + + ALL Y A EKAEE+F ++K +
Sbjct: 76 IAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKDLEFPMSIF 135
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN+M+ LY + + K+A V+ ++++N+ P FTY + I + +I +++ +D M
Sbjct: 136 AYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGMEQVVDSM 194
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ G D L Y++ V A++ E + QW+ L+ Y L
Sbjct: 195 KAE-GIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLC-RILLPFYGKLQ 252
Query: 181 NKDKIDQIWK 190
+D++ ++W+
Sbjct: 253 MEDEVRRLWE 262
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 2/240 (0%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
A AK E++ E +Q N + +MTLY + G + + +E+ + N +
Sbjct: 68 AKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAHKLFDELPKLNCERTV 127
Query: 95 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 154
++N +S+C + D++ F E+ + G D V Y LVN + L +A S L
Sbjct: 128 MSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLDSA-LSVL 186
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
E EK + IT++ L+ + G+ ++IW ++ R+Y L +
Sbjct: 187 DEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISE 246
Query: 215 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+ E E+ID+ K S D+ N L+ F + G E+A ++ + + P A+
Sbjct: 247 NRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRAT 305
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 200 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 259
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD+FT N + N+++ K++ E++ + Y+ L+ +
Sbjct: 260 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE-LPPVRATYMTLIPFLVEKGD 318
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 198
A E K + R+W+ L+ + GL + KI++ + + + K K
Sbjct: 319 FEMA-----TELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELEKLK 367
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 3/246 (1%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A+L L A AK E++ E KQ N + +MTLY G E + +E+ +
Sbjct: 63 AVLTL-AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDELPKL 121
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
N + ++N +S C + D++ F E+ + G D V Y +VN + L +
Sbjct: 122 NCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDS 181
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
A S L E EK + IT++ L+ + G+ ++IW ++ R+Y L
Sbjct: 182 A-LSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKL 240
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
+ + E E+ID+ K S D+ N L+ F + G E+A ++ + +
Sbjct: 241 RGVISENRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNEL 299
Query: 269 APTNAS 274
P A+
Sbjct: 300 PPVRAT 305
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 200 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 259
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD+FT N + N+++ K++ E++ + Y+ L+ +
Sbjct: 260 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE-LPPVRATYMTLIPFLVEKGD 318
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 198
A E K + R+W+ L+ + GL + KI++ + + + K K
Sbjct: 319 FDMA-----TELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELAKLK 367
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 2/240 (0%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
A AK E++ E KQ N + +MTLY G E + +E + N +
Sbjct: 29 AKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEXPKLNCERTV 88
Query: 95 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 154
++N +S C + D++ F E+ + G D V Y +VN + L +A S L
Sbjct: 89 VSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSA-LSVL 147
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
E EK + IT++ L+ + G+ ++IW ++ R+Y L +
Sbjct: 148 DEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISE 207
Query: 215 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+ E E+ID+ K S D+ N L+ F + G E+A ++ + + P A+
Sbjct: 208 NRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRAT 266
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 161 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 220
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD+FT N + N+++ K++ E++ + Y+ L+ +
Sbjct: 221 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNE-LPPVRATYMTLIPFLVEKGD 279
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQK 198
A E K + R+W+ L+ + GL + KI++ + + + K K
Sbjct: 280 FDMA-----TELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVELAKLK 328
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
TK GI GE+ F +P + Y L+ + + +++++ + L+
Sbjct: 135 TKHHGISHGEKLFLHVPSEFQNELLYNNLVISCLEKGVIRLSLDYMKKMREQGHPISYLI 194
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N ++ L+ S G + + ++ +++ VVP + TYN+ + A NID + K ++M
Sbjct: 195 FNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEANEHNIDGLVKVFNDMK 254
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLG 180
++ V + L + A AE+ VEA EKS + W T D LIILY LG
Sbjct: 255 RFKVEPNE-VSFCILATAHAAARLYTVAEA--YVEAVEKSCSGDNWSTLDVLIILYGHLG 311
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFD 236
+ ++++ W + + + S++Y+ + +Y +G L E+ + K +T F
Sbjct: 312 KEKELERTW-GIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWLEMKSIHGLRSTEQF- 369
Query: 237 ISACNRLLGAFSDVGLTEKA 256
N +L + GL +KA
Sbjct: 370 ----NSMLSVYCKHGLIKKA 385
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 63
VFG+ + E +P + + Y +LL Y +KAE F+++++ L A YN
Sbjct: 106 VFGLEEAGNFVESIPENLRNESIYNSLLSSYVRRNDLDKAESTFKKMRELGLLLRASPYN 165
Query: 64 EMMTLYMSV--GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
M +LY + G KV ++ E+K N+ D T N + A +I ++KFL E
Sbjct: 166 SMTSLYRRIPHGNRCKVDEILREMKESNIKLDRDTVNNALRVYADVTHIATMEKFLAEWE 225
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
++ DW+ +++ Y+ + A+ ++ R +Y+ L+ LY G
Sbjct: 226 GNT--PLDWLTRLDMAKAYLRSGFKGKAKEML----RRTEELRDPKSYEELMRLYGEAGG 279
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI-IDQWKQSATSDFDISAC 240
+ + ++W L K + + ++ S L L + E +W+ S FD+
Sbjct: 280 RKDVYRVW-DLYKKLSKKDNEGFRALIGSLLKLDDINGAEEFYYKEWECSGLP-FDVRIP 337
Query: 241 NRLLGAFSDVGLTEKANEF 259
L+ ++ + G+ EKA++
Sbjct: 338 TMLVSSYREKGMVEKADKL 356
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 22/236 (9%)
Query: 4 VFGIHSGERYFE-GLPLSAKTSETYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALM 61
V G E++FE +P + K Y LL YA + T +KAE +FE++
Sbjct: 435 VLGFEEAEKFFERSIPENMKDDYVYGTLLSCYAKSHKTLDKAEAIFEKMGDLGFLSKPSP 494
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE-M 120
+N M++LY +G+ EKV ++ ++K N+ PD T N + A +I + K+ E +
Sbjct: 495 FNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNNVLRMYADETDIKTMDKYKREWI 554
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ + + V + N Y A L+ A T + E R W Y
Sbjct: 555 NAEKNTKLEMRTMVAMANAYERAGLLLKAIEITRSKNE---VHRLWNEY----------- 600
Query: 181 NKDKIDQIWK----SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
K+K + +K +L + + Y ++SS L L LK EI +W+
Sbjct: 601 -KEKEKRNYKIDDANLCKCRSAVGDEEYQSVISSLLKLDDLKGAEEIYGEWEPEGP 655
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 118/247 (47%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T ++++Y A +++KA++LF ++++ N Y +M + G + + E+
Sbjct: 199 TFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAEL 258
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +PD++TYN + + + + K+ M ++G D V Y L++ + A
Sbjct: 259 QSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAM-VEAGVRPDQVSYNILIDAFGRAGL 317
Query: 146 LVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+A++ ++ EA T + ++ L+ YA G + +++ + + + K +
Sbjct: 318 TADAQAVYDSMKEAGFKPTMK---SHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFM 374
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ +LS+Y G + E+ +++ S+ + DIS N L+ A++ G EKA E L
Sbjct: 375 FNSLLSAYGNSGRIDEMESLLESM-VSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSL 433
Query: 264 LQKNCAP 270
K P
Sbjct: 434 ESKGLTP 440
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 105/281 (37%), Gaps = 49/281 (17%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS--------FNAL-MYNE 64
F+ LP T ++ LL Y+ EKAE+LF +K+SN S F+ + YN
Sbjct: 112 FQCLP----TETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNT 167
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS--- 121
+ + G++ + +++++ ++P + T+ + I+ D+ M
Sbjct: 168 YLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKAL 227
Query: 122 CDS-------------------------------GGSDDWVKYVNLVNIYITASHLVNAE 150
C G D Y L+ Y H A+
Sbjct: 228 CPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAK 287
Query: 151 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 210
E + Q ++Y+ LI + G ++ S++ K T ++++ +LSS
Sbjct: 288 EVFQAMVEAGVRPDQ-VSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSS 346
Query: 211 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
Y G + E ++ + + S D N LL A+ + G
Sbjct: 347 YAKAGKVTEAERLVREIENSGVKP-DTFMFNSLLSAYGNSG 386
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T L++ YA + EKAEE+F ++ L+ + + + +M Y K + +++
Sbjct: 409 TLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKM 468
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ +PD T +++SSC + +QVK+ D
Sbjct: 469 VKAGCIPDRATAKVFLSSCRSP---EQVKEVTD 498
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T +++ LL YA A +AE L ++ S + + M+N +++ Y + G+++++ +
Sbjct: 335 PTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESL 394
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+E + PDI T N I++ A I++ ++ + + G + D + + +L+ Y
Sbjct: 395 LESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLE-SKGLTPDVMSWTSLMGAY 452
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 96/257 (37%), Gaps = 12/257 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ L+ Y +K +AE+ F +K +N ++ Y Q+EK + E+K
Sbjct: 86 FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145
Query: 87 RKNVVP---------DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
N P I TYN ++ + + Q + +M G + ++
Sbjct: 146 ESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQ-KQGILPAVNTFTIMI 204
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
NIY A + A+ K++ TY L+ +A GN + ++I+ L+
Sbjct: 205 NIYGKAYYSDKAD-DLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGF 263
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
Y +L +Y H E+ ++ +S N L+ AF GLT A
Sbjct: 264 IPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVS-YNILIDAFGRAGLTADAQ 322
Query: 258 EFHMLLLQKNCAPTNAS 274
+ + + PT S
Sbjct: 323 AVYDSMKEAGFKPTMKS 339
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 11/223 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E Y E +P S + Y LL +KAEE+F ++K
Sbjct: 234 IAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITTF 293
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K+A V+ +++++V P +FTY L I + + +I +++ ++ M
Sbjct: 294 ACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVETM 352
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
+ + V+ + LV Y+ AE + L E E ++ + +W+ L+ YA L
Sbjct: 353 KAEGIEPNLQVQSI-LVRHYVFGGLKEKAE-AILKEMEGGNLKENRWVCR-VLLPPYAAL 409
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
G D +++IWK + + ++ + +Y G LK+V E
Sbjct: 410 GKADDVERIWK---VCESNPRLPEFVAAIEAY---GKLKKVEE 446
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S+ Y+ALL +YA K K ++L +++ S L ++ ++ LY+ G+VEK ++
Sbjct: 462 SSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKIL 521
Query: 83 EEIKRKNVVPDIF-TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++ +++ + +F TY + A +I +K +M SG ++ L+ Y+
Sbjct: 522 QKAMQQSPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMR-QSGYVSRLRQFQCLIQAYV 580
Query: 142 TA 143
A
Sbjct: 581 NA 582
>gi|147812055|emb|CAN60032.1| hypothetical protein VITISV_006384 [Vitis vinifera]
Length = 42
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 39/42 (92%)
Query: 194 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
MTKQK+ SR+Y+CILSSY+MLGH+K+VG +ID+WK+S T+DF
Sbjct: 1 MTKQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKKSTTTDF 42
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 11/223 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E Y E +P S + Y LL +KAEE+F ++K
Sbjct: 197 IAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITTF 256
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY V + +K+A V+ +++++V P +FTY L I + + +I +++ ++ M
Sbjct: 257 ACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVETM 315
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
+ + V+ + LV Y+ AE + L E E ++ + +W+ L+ YA L
Sbjct: 316 KAEGIEPNLQVQSI-LVRHYVFGGLKEKAE-AILKEMEGGNLKENRWVCR-VLLPPYAAL 372
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
G D +++IWK + + ++ + +Y G LK+V E
Sbjct: 373 GKADDVERIWK---VCESNPRLPEFVAAIEAY---GKLKKVEE 409
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S+ Y+ALL +YA K K ++L +++ S L ++ ++ LY+ G+VEK ++
Sbjct: 425 SSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKIL 484
Query: 83 EEIKRKNVVPDIF-TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++ +++ + +F TY + A +I +K +M SG ++ L+ Y+
Sbjct: 485 QKAMQQSPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMR-QSGYVSRLRQFQCLIQAYV 543
Query: 142 TA 143
A
Sbjct: 544 NA 545
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 131/278 (47%), Gaps = 27/278 (9%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+H E Y +P S + Y LL Y A +KAEE+F R+K
Sbjct: 218 IAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKDLEFPMTTF 277
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
Y++M+ LY + + ++A ++ ++++NV P FTY + I + + +I +++ +D M
Sbjct: 278 AYDQMLILYKRIDR-RRIADILSLMEKENVKPRPFTYKILIDAKGLSNDISGMEQVVDTM 336
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLV----NAESSTLVEAEKSITQR--QWITYDFLII 174
+ +K +++ + + A H V ++ +++A + + + +W +L+
Sbjct: 337 KAEG------IK-LDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGSRWPCR-YLLP 388
Query: 175 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ----WKQS 230
LY L +D++ ++W+ + + + + ++ L +++E +I D+ WK+
Sbjct: 389 LYGELQMEDEVRRLWE---ICEPNPNVEECMAAIVAWGKLKNIQEAEKIFDRVVKTWKRL 445
Query: 231 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
+T + + ++ + D + K E + + C
Sbjct: 446 STKHY-----STMIKVYGDSKMLTKGKELVNQMAKSGC 478
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ I E+ F+ + + K +++ Y+ ++ +Y +K K +EL ++ +S + +
Sbjct: 424 KLKNIQEAEKIFDRVVKTWKRLSTKHYSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPM 483
Query: 61 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+++ ++ LY+ G+VEK + + + +K+ + P +Y + A ++ +K +
Sbjct: 484 IWDAVVKLYVEAGEVEKADSFLFKAVKQYGMKPLFDSYRTLMVHYARKGDVHNSEKIFHK 543
Query: 120 MSCDSGGSDDWVKYVNLVNIYITA 143
+ SG + ++V LV Y+ A
Sbjct: 544 IR-QSGYPTHFGQFVTLVQAYLNA 566
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 131/300 (43%), Gaps = 38/300 (12%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+H E Y +P S + Y LL Y A KAEE+F ++K
Sbjct: 214 IAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKDLEFPMTTF 273
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN+++ LY + K+A V+ ++++NV P FTY + I + + +I +++ +D M
Sbjct: 274 AYNQVLVLYKRNDR-RKIADVLLLMEKENVKPSPFTYKILIDAKGLSKDISGMEQVVDTM 332
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ D V + L+ + + L + +TL E E+ ++ L+ LY L
Sbjct: 333 KAEGIELD--VFALCLLAKHYVSCGLKDKAKATLKEMEEINSKGSRWPCRLLLPLYGELE 390
Query: 181 NKDKIDQIWKSLRM----------------------------------TKQKMTSRNYIC 206
+D++ ++W+ K+K+++++Y
Sbjct: 391 MEDEVRRLWEICEANPHIEECMAAIVAWGKLKNIHEAEKIFDKVVKTWPKKKISTKHYCT 450
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ Y L + E+++Q +S S D A + ++ + + G EKA+ F + ++K
Sbjct: 451 MIKVYGDCKMLTKGKELVNQMAESGYS-IDPLAWDAVVKLYVEAGEVEKADTFLVKAVKK 509
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 3 KVFGIHSGERYFEGL----PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
K+ IH E+ F+ + P +++ Y ++ +Y K K +EL ++ +S S +
Sbjct: 420 KLKNIHEAEKIFDKVVKTWPKKKISTKHYCTMIKVYGDCKMLTKGKELVNQMAESGYSID 479
Query: 59 ALMYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
L ++ ++ LY+ G+VEK +V+ +K+ + P +Y ++ A ++ +K
Sbjct: 480 PLAWDAVVKLYVEAGEVEKADTFLVKAVKKYEMRPLYCSYRTLMNHYARRGDVHNAEKIF 539
Query: 118 DEMSCDSGGSDDWV-KYVNLVNIYITA 143
+M G W ++ L+ Y+ +
Sbjct: 540 YKMR--QSGYGPWFNQFETLIQAYVNS 564
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 121/273 (44%), Gaps = 14/273 (5%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI E F +P + Y L+ + + ++++ +L + +Y
Sbjct: 128 KVHGISEAESLFLRIPQEYRNELLYNNLVMACLELSLIKLSYGYMRKMRELSLPISPYVY 187
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ L+ S G+ + + ++ ++K V P TYN+ + A NID V + ++M
Sbjct: 188 NRLIILHSSEGRRKTIPKILAQMKASKVTPHTSTYNILLKIQANEHNIDGVARVFNDMKR 247
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGN 181
++ + ++ + + V S T +EA K S+T W T + L+ILY LG
Sbjct: 248 AKVEPNEITYGILAISHAVARLYTV---SQTYIEAIKNSMTGTNWSTQEILLILYGYLGK 304
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV----GEIIDQWKQSATSDFDI 237
+ ++ WK +++ + S+++ + ++ +G +++ GEI K T F
Sbjct: 305 EKELKMTWKLMQVLPH-IRSKSFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLTEQF-- 361
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N +L + G+ +KA+ + C P
Sbjct: 362 ---NSMLSVYCRHGVVDKASAVFKEMRASGCQP 391
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S+++T + + E+AEE++ +K + +N M+++Y G V+K + V +
Sbjct: 323 SKSFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLTEQFNSMLSVYCRHGVVDKASAVFK 382
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ P+ TY C L VK+ L+ M D G + + V ++
Sbjct: 383 EMRASGCQPNAITYRHLALGC---LKAGLVKQALNTM--DMGKKEVVTRKVRNSTPWLET 437
Query: 144 SHLV 147
+H++
Sbjct: 438 THML 441
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ +Y + KAE LFE++K + S +A+ YN ++ + G EKV + EE+
Sbjct: 373 TYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEM 432
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ D TYN I D+ + +M SG + D V Y L+++ AS
Sbjct: 433 VKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMK-SSGRNPDAVTYTVLIDLLGKASK 491
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S + E + + TY LI YA +G + + ++ + +R + K Y
Sbjct: 492 IEEA-SKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYS 550
Query: 206 CILSSYLMLGHLKEVGEI 223
+L +L +K+ +
Sbjct: 551 VMLDFFLRFNEIKKAAAL 568
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM-SVGQVEKVA 79
A T + Y A++ +YA EK E+F +++ + + +N ++ + S V +A
Sbjct: 261 ADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLA 320
Query: 80 L-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+ +++E+ + + PDI TYN IS+C+ N+ + M + D W Y +++
Sbjct: 321 IELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWT-YNAMIS 379
Query: 139 IYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQI 188
+Y + AE L E KS +TY+ L+ ++ GN +K+ I
Sbjct: 380 VYGRCGFALKAEH--LFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDI 428
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 107/243 (44%), Gaps = 17/243 (6%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ + ++L LY+ + + +++ ++ + L+ + YN ++T+Y + E+ ++ +
Sbjct: 965 QIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHK 1024
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K + P TY I++ + DQ ++ +E+ + G D Y ++ +Y T+
Sbjct: 1025 MKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSN-GYKLDRSFYHLMMKMYRTSG 1083
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
AE+ + E I + T L++ Y G ++ D+I K+LR + + Y
Sbjct: 1084 DHQKAENLLEIMKEAGI-EPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPY 1142
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSAT-SDFDISAC--------------NRLLGAFSD 249
++ +YL G K E + + K++A D I C N LL A
Sbjct: 1143 SSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLLNALQA 1202
Query: 250 VGL 252
VG
Sbjct: 1203 VGF 1205
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + ++A +F ++ + + YN M+++Y G K + E++
Sbjct: 338 TYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKL 397
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K PD TYN + + + N ++V+ +EM G D + Y ++++Y H
Sbjct: 398 KSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEM-VKMGFGKDEMTYNTIIHMY--GKH 454
Query: 146 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRM---TKQKMTS 201
+ E+ L KS + +TY LI L LG KI++ K + K T
Sbjct: 455 GRHDEALRLYRDMKSSGRNPDAVTYTVLIDL---LGKASKIEEASKVMSEMLDAGVKPTL 511
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
Y ++ +Y +G E E ++ ++S
Sbjct: 512 HTYSALICAYAKVGRRVEAEETFNRMRESG 541
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY+AL+ YA +AEE F R+++S + + L Y+ M+ ++ +++K A +
Sbjct: 510 TLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALY 569
Query: 83 EEIKRKNVVPDIFTYNLWISS 103
+E+ PD Y + + +
Sbjct: 570 QEMIEAGFTPDTGLYEVMLPA 590
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 19/215 (8%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + +L + A A E+F + +S ++ +YN MM +Y G EKV
Sbjct: 227 ATNARMVATILSVLGKANQEGIAVEIFAKA-ESVIADTVQVYNAMMGVYARNGNFEKVNE 285
Query: 81 VVEEIKRKNVVPDIFTYNLWIS----SCAATLN-----IDQVKKFLDEMSCDSGGSDDWV 131
+ ++ + PDI ++N I+ SCA +D+V KF G D +
Sbjct: 286 MFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKF--------GLRPDII 337
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
Y L++ S+L A E + Q TY+ +I +Y G K + +++
Sbjct: 338 TYNTLISACSRESNLKEA-IGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEK 396
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
L+ + Y +L ++ G+ ++V +I ++
Sbjct: 397 LKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEE 431
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
K TY ++H+Y ++A L+ +K S + +A+ Y ++ L ++E+ +
Sbjct: 438 GKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASK 497
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+ E+ V P + TY+ I + A + ++ + M +SG D + Y +++ +
Sbjct: 498 VMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMR-ESGIKADHLAYSVMLDFF 556
Query: 141 I 141
+
Sbjct: 557 L 557
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 129/292 (44%), Gaps = 36/292 (12%)
Query: 13 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 72
+F G + T+ TY L+H + ++A +L + + Q + +A +YN ++ +
Sbjct: 81 HFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Query: 73 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 132
G+++ V++ + ++ VPD+ TY I C T +D+ +K +++M +SG + D V
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK-ESGLTPDTVA 199
Query: 133 YVNLVNIYITASHL--VNAESSTLVEA-----------------------------EKSI 161
Y L+N + L V+ +VEA EK I
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 162 TQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 218
++ +TY+ L+ + + D+ +++ + + + T Y ++ + L
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319
Query: 219 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ +++ ++ S D+ N LL G E+A+E ++++K+CAP
Sbjct: 320 DAYRVMEDMFKAGISP-DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP 370
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/270 (17%), Positives = 114/270 (42%), Gaps = 11/270 (4%)
Query: 6 GIHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 63
+ + E + S T +T Y ALL+ E+ +L E + ++ + YN
Sbjct: 177 ALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYN 236
Query: 64 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
++ G+ E+ ++E++ K PD+ TYN + +D+ ++ L++M
Sbjct: 237 TVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV-G 295
Query: 124 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 183
+ + Y L+ + A L +A + + K+ +TY+ L+ GL
Sbjct: 296 RRCAPTVITYTTLIGGFSRADRLADA-YRVMEDMFKAGISPDLVTYNCLL---DGLCKAG 351
Query: 184 KIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
K+++ + L + +K + + Y +++ LG + + +++ + ++
Sbjct: 352 KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQP-NLVTF 410
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N ++ F G ++ ++ L+ + +C P
Sbjct: 411 NTMIDGFCKAGKVDEGHKVLELMKEVSCTP 440
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQS-----------NLSFNALMYNEMMTLYMSVGQ 74
TYT L+H YAG TE AE + R+ + + N + Y +MT Y + G
Sbjct: 230 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 289
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
VE V+E ++ + P++ TY + +++ ++ + L M + + + Y
Sbjct: 290 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM-ISAYVAPNANTYT 348
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L++ Y + AE L E + +T+ L+ +YA G + + +
Sbjct: 349 TLLHAYTVNGNAAGAE-EVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 407
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
T+ + +L++Y++ G + +++ + + A DF ++ N L+ ++D G
Sbjct: 408 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLT-YNTLMNGYADKGDVA 466
Query: 255 KANEFHMLLLQKNCAP 270
A + K P
Sbjct: 467 GAEGVLARMRAKGVGP 482
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + TYT LLH Y AEE+ R++ + + AL + +MT+Y + G+VE
Sbjct: 341 APNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKG 400
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+ ++ V P ++ +++ ++ ++ L ++ D + Y L+N Y
Sbjct: 401 VLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEA-YPDFPLTYNTLMNGY 459
Query: 141 ITASHLVNAES 151
+ AE
Sbjct: 460 ADKGDVAGAEG 470
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQS-----------NLSFNALMYNEMMTLYMSVGQ 74
TYT L+H YAG TE AE + R+ + + N + Y +MT Y + G
Sbjct: 244 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 303
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
VE V+E ++ + P++ TY + +++ ++ + L M + + + Y
Sbjct: 304 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRM-ISAYVAPNANTYT 362
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L++ Y + AE L E + +T+ L+ +YA G + + +
Sbjct: 363 TLLHAYTVNGNAAGAE-EVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEA 421
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
T+ + +L++Y++ G + +++ + + A DF ++ N L+ ++D G
Sbjct: 422 AGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLT-YNTLMNGYADKGDVA 480
Query: 255 KANEFHMLLLQKNCAP 270
A + K P
Sbjct: 481 GAEGVLARMRAKGVGP 496
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + TYT LLH Y AEE+ R++ + + AL + +MT+Y + G+VE
Sbjct: 355 APNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKG 414
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+ ++ V P ++ +++ ++ ++ L ++ D + Y L+N Y
Sbjct: 415 VLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEA-YPDFPLTYNTLMNGY 473
Query: 141 ITASHLVNAES 151
+ AE
Sbjct: 474 ADKGDVAGAEG 484
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
AK+ + Y KA + + +K+ NL A +N++ LY + + + + +
Sbjct: 105 AKSEAALITMFENYVIHSLLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPV 164
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E++ + P++ TYN+ I A + + +++ +M CD G+ + L + Y
Sbjct: 165 ILREMRDMRISPNVETYNILIGIKAKKGDTEGMERLFSKMKCDGDGTPNGEILCTLASGY 224
Query: 141 ITASHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ A A + L EA S R+ +D +I LYA +G D ID+IW+ R +
Sbjct: 225 VNAGDHEKA-MAYLKEAVASDEFRESRRVHDKVIALYAAMGRADMIDRIWRFTRRFPV-V 282
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
++ +Y+ +++Y +G + ++ + + T
Sbjct: 283 SANSYVATIAAYEKVGRIDRAEKVFAELTEKRT 315
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L Y KAE+L ER++ N N L Y+ ++ YM G + A + +
Sbjct: 322 YVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPKMAAETLTRMF 381
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ V P T L + A +++ + +M +S + + Y +L+ Y+ A
Sbjct: 382 EERVPPCFDTVMLILKEHAKNADVNSAELLFQDMRRES-YNKNVAAYNSLLEAYVNAG 438
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
AK+ + Y KA + + +K+ NL A +N++ LY + + + + +
Sbjct: 105 AKSEAALITMFENYVIHSLLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPV 164
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E++ + P++ TYN+ I A + + +++ +M CD G+ + L + Y
Sbjct: 165 ILREMRDMRISPNVETYNILIGIKAKKGDTEGMERLFSKMKCDGDGTPNCEILCTLASGY 224
Query: 141 ITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ A A + L EA S Q +D +I LYA +G D ID+IW+ R +
Sbjct: 225 VNAGDHEKA-MAYLKEAVASEEFQESRRVHDKVIALYAAMGRADMIDRIWRFTRRFPV-V 282
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
++ +Y+ +++Y +G + ++ + + T
Sbjct: 283 SANSYVATIAAYEKVGRIDRAEKVFAELTEKRT 315
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L Y KAE+L ER++ N N L Y+ ++ YM G + A + +
Sbjct: 322 YVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPKMAAETLNRMF 381
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ V P T L + A ++ + +M +S + + Y +L+ Y+ A
Sbjct: 382 EERVPPCFDTVMLILKEHAKNADVSSAELLFQDMRRES-YNKNVAAYNSLLEAYVNAG 438
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 5/191 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E Y E +P S K Y LL A +KA E+F ++K L
Sbjct: 82 IAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNKMKDLELPITLF 141
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN+++ LY + +K+A V+ ++++NV P +FTY L I + + +I +++ + M
Sbjct: 142 SYNQLLLLYKRHDK-KKIADVLLSMEKENVKPSLFTYILLIDTKGQSNDIAGMEQIAETM 200
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
+ G + +K ++ + + L L E E ++ + +W F++ LY L
Sbjct: 201 KAE--GIEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGGNLEEHRWAC-QFMLPLYGTL 257
Query: 180 GNKDKIDQIWK 190
G D++ ++WK
Sbjct: 258 GKADEVSRLWK 268
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S+ Y+ALL +YA K K ++L +++ S L ++ ++ LY+ G+VEK ++
Sbjct: 310 SSKHYSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKLYVEAGEVEKADSIL 369
Query: 83 EEIKRKNVVPDIF-TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ ++N + +F +Y + + A +I +K M +G ++ L+ YI
Sbjct: 370 NKAVQQNQMKPMFSSYMIIMEKYAKKGDIHNAEKMFHRMR-QAGYQARSKQFQTLIQAYI 428
Query: 142 TA 143
A
Sbjct: 429 NA 430
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 4/246 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEE 84
YT+L+ + + A+ ++ LFE +++ NA+ YN M+ LY G +++ + +E
Sbjct: 215 AYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQE 274
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K + PD +TYN I++C + + + EM ++G + V Y L+++Y
Sbjct: 275 MKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMK-EAGCCPNRVTYNALLDVYGKGG 333
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
A S LVE E + +TY+ LI YA G D+ + KSL Y
Sbjct: 334 MHKEA-SELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTY 392
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++S++ ++ E + +++ + +I N L+ + + + + +
Sbjct: 393 CTLISAFNRAERYEKALETFTEMRKTNCTP-NIVTYNILIDIYGRMEKLDDMMKVFKFMQ 451
Query: 265 QKNCAP 270
+KNC P
Sbjct: 452 EKNCTP 457
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ ++A LF+ +K++ N + YN ++ +Y G ++ + ++ E+
Sbjct: 286 TYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM 345
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+I TYN I++ A D+ L + G D Y L++ + A
Sbjct: 346 EAAGISPNIVTYNELIAAYARAGLCDEAAA-LKKSLLSKGLCPDEFTYCTLISAFNRAER 404
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A T E K+ +TY+ LI +Y G +K+D + K + ++K + + +
Sbjct: 405 YEKA-LETFTEMRKTNCTPNIVTYNILIDIY---GRMEKLDDMMKVFKFMQEKNCTPDLV 460
Query: 206 ---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
+L S+ G L EV + + K++ + N L+ + G + + + +
Sbjct: 461 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMP-GVDTFNILIECYGRCGYVDYSVDIYKG 519
Query: 263 LLQKNCAPT 271
LL+ PT
Sbjct: 520 LLRTGLQPT 528
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ + A++ + A W E+A +L E ++++ L + + YN +M++Y G K V+ E
Sbjct: 636 KVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSE 695
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++R P++ TYN + S +D + +M
Sbjct: 696 MRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 731
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGA-KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
GL LS + L+H YA + ++ + + + E K + + ++ + Y G
Sbjct: 559 GLQLS---DACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGM 615
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ L + ++ PDI +N IS CA I++ K L+E+ + D V Y
Sbjct: 616 DNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIR-KAQLKPDGVTYN 674
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L+++Y AE + E ++ ITY+ L+ Y G D +++ +
Sbjct: 675 CLMSMYGREGMYYKAE-EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA 733
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ + + + ++ SY LG KE +I+
Sbjct: 734 ARVRPDNFTFNTLVGSYSSLGLYKEALSVIE 764
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 109/253 (43%), Gaps = 6/253 (2%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T T+ AL+ A ++ E++ + + ++ L + + ++ Y + GQ ++
Sbjct: 527 PTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKY 586
Query: 82 VEEIKR--KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
++E+++ K + I ++ C ++ ++ + L+++ D+G S D +K N +
Sbjct: 587 IDELEKSAKQPLSGILCKTFVLAYCKCGMD-NEAQLALNQLY-DNGHSPD-IKVFNAMIS 643
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ L E K+ + +TY+ L+ +Y G K +++ +R +
Sbjct: 644 MCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAP 703
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
Y +L SY G + + + +A D N L+G++S +GL ++A
Sbjct: 704 NLITYNTLLYSYTKHGRMDDAARVFGDM-VAARVRPDNFTFNTLVGSYSSLGLYKEALSV 762
Query: 260 HMLLLQKNCAPTN 272
+ + C PT
Sbjct: 763 IEYMTEHGCQPTQ 775
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 4/245 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 85
YT+L+ + + A+ ++ LFE +++ NA+ YN M+ LY G +++ + +E+
Sbjct: 77 YTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM 136
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD +TYN I++C + + + EM ++G + V Y L+++Y
Sbjct: 137 KDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMK-EAGCCPNRVTYNALLDVYGKGGM 195
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A S LVE E + +TY+ LI YA G D+ + KSL Y
Sbjct: 196 HKEA-SELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYC 254
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++S++ ++ E + +++ + +I N L+ + + + + + +
Sbjct: 255 TLISAFNRAERYEKALETFTEMRKTNCTP-NIVTYNILIDIYGRMEKLDDMMKVFKFMQE 313
Query: 266 KNCAP 270
KNC P
Sbjct: 314 KNCTP 318
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ ++A LF+ +K++ N + YN ++ +Y G ++ + ++ E+
Sbjct: 147 TYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM 206
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+I TYN I++ A D+ L + G D Y L++ + A
Sbjct: 207 EAAGISPNIVTYNELIAAYARAGLCDEAAA-LKKSLLSKGLCPDEFTYCTLISAFNRAER 265
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A T E K+ +TY+ LI +Y G +K+D + K + ++K + + +
Sbjct: 266 YEKA-LETFTEMRKTNCTPNIVTYNILIDIY---GRMEKLDDMMKVFKFMQEKNCTPDLV 321
Query: 206 C---ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
+L S+ G L EV + + K++ + N L+ + G + + + +
Sbjct: 322 TWNSLLKSFGNCGMLTEVSNVFREMKRAGYMP-GVDTFNILIECYGRCGYVDYSVDIYKG 380
Query: 263 LLQKNCAPT 271
LL+ PT
Sbjct: 381 LLRTGLQPT 389
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ + A++ + A W E+A +L E ++++ L + + YN +M++Y G K V+ E
Sbjct: 497 KVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSE 556
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++R P++ TYN + S +D + +M
Sbjct: 557 MRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDM 592
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 109/251 (43%), Gaps = 6/251 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T T+ AL+ A ++ E++ + + ++ L + + ++ Y + GQ ++ +
Sbjct: 389 TVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYI 448
Query: 83 EEIKR--KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+E+++ K + I ++ C ++ ++ + L+++ D+G S D +K N +
Sbjct: 449 DELEKSAKQPLSGILCKTFVLAYCKCCMD-NEAQLALNQLY-DNGHSPD-IKVFNAMISM 505
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ L E K+ + +TY+ L+ +Y G K +++ +R +
Sbjct: 506 CAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPN 565
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y +L SY G + + + +A D N L+G++S +GL ++A
Sbjct: 566 LITYNTLLYSYTKHGRMDDAARVFGDM-VAARVRPDNFTFNTLVGSYSSLGLYKEALSVI 624
Query: 261 MLLLQKNCAPT 271
+ + C PT
Sbjct: 625 EYMTEHGCQPT 635
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 6/211 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGA-KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
GL LS + L+H YA + ++ + + + E K + + ++ + Y
Sbjct: 420 GLQLS---DACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCM 476
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ L + ++ PDI +N IS CA I++ K L+E+ + D V Y
Sbjct: 477 DNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIR-KAQLKPDGVTYN 535
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L+++Y AE + E ++ ITY+ L+ Y G D +++ +
Sbjct: 536 CLMSMYGREGMYHKAE-EVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVA 594
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ + + + ++ SY LG KE +I+
Sbjct: 595 ARVRPDNFTFNTLVGSYSSLGLYKEALSVIE 625
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R++++PD+ T+N+ + S I + + D M+ G + D Y ++N Y T
Sbjct: 316 RRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 374
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I T++ LI YA G DK I+ +R K Y
Sbjct: 375 LVDMTDLFDLMLGDGIAP-VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYT 433
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++++ +G + + E +Q + D A + L+ F G KA E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKEL 486
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 39/294 (13%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TS TY L+ A E A F ++ ++ L + ++ N ++ + +
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKR 161
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 120
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221
Query: 121 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
+CD G D+V Y ++V+ A + AE+
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
K + W TY+ LI Y+ G + +++K +R + ++ S G +
Sbjct: 282 NKGVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKI 340
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 341 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPV 393
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 99/233 (42%), Gaps = 5/233 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y+ LL + +A++L + + S + + YN ++ + G V K + +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD TY+ + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT-YNNLIYGYSST 302
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
A E + +T++ L+ G + ++ ++ M Q +
Sbjct: 303 GQWKEA-VRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +L+ Y G L ++ ++ D + I N L+ A+++ G+ +KA
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPV-ICTFNVLIKAYANCGMLDKA 413
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/194 (16%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ YA +KA +F ++ + N L Y ++ +G+++ ++
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V PD + Y+ I ++ + K+ + E+ ++G D V + +++N
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM-NNGMHLDIVLFSSIINNLCKLGR 514
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+++A++ + + + Y L+ Y +G +K +++ ++ + Y
Sbjct: 515 VMDAQNIFDLTVNVGL-HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573
Query: 206 CILSSYLMLGHLKE 219
+++ Y +G + E
Sbjct: 574 TLVNGYCKIGRIDE 587
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 42/268 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ Y + +A ELF R+ + L + L YN ++ Y V++ ++ +E+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KN+VP I +YN I + I VKK LDEM S D V Y L++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH-GSAQPPDVVTYNILIDALCKEGR 420
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK--------- 196
++ A LV K + +TY+ ++ Y N + I+ RM K
Sbjct: 421 ILEA-LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN--RMVKSGLEPDILN 477
Query: 197 ---------------------QKMTSRNYICILSSY-------LMLGHLKEVGEIIDQWK 228
++M +N I ++SY LG + V E++D+
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKA 256
S S D+ N LL AF +KA
Sbjct: 538 DSGQSP-DVITYNILLDAFCKTQPFDKA 564
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+AL+ + A L ++ + + +A+ YN ++ SVG+ ++V ++ ++
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R+NV PD +T+N+ I + I + + L MS G D V Y L+ Y + +
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS-KRGEKPDIVTYNALMEGYCSREN- 315
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
V+ K + + Y+ LI Y D+ ++K L T +Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ G + V +++D+ SA D+ N L+ A G +A +++++K
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPP-DVVTYNILIDALCKEGRILEALGVLVMMMKK 434
Query: 267 NCAP 270
P
Sbjct: 435 GVKP 438
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + + A L + +++S++ N +MY+ ++ G V + +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++ D TYN I C + +V + L +M ++ DD+ + L++
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI-LIDALCKEGR 280
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--N 203
++ A+ L K + +TY+ L+ Y N + +++ RM K+ + N
Sbjct: 281 ILEAQ-GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN--RMVKRGLEPDVLN 337
Query: 204 YICILSSY 211
Y ++ Y
Sbjct: 338 YNVLIDGY 345
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 38/261 (14%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYA---GAKWTEKAEELFERVKQSNLSFNA 59
KV + E++FE +P + + Y +LL YA G K +KAE +F+++K+ L
Sbjct: 122 KVLNLEEAEKFFESIPENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRP 181
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
YN M +LY S+G +KV ++ E+K NV D T N + AA ++ + KFL +
Sbjct: 182 SPYNSMTSLYSSLGNRDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLAD 241
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
+ + T++ K+ L+ LY
Sbjct: 242 -----------------------RKEITRLDGLTMLAMAKAYE---------LMSLYGEA 269
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI-IDQWKQSATSDFDIS 238
G + + ++W + T+QK + + ++ S L LG K +I ++W+ S +FD
Sbjct: 270 GEIEDVHRVWDKYKATRQK-DNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGL-EFDNR 327
Query: 239 ACNRLLGAFSDVGLTEKANEF 259
+ L+ + + G+ KA++
Sbjct: 328 IPDMLVSGYREKGMVMKADKL 348
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 3 KVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSFNAL 60
KV G+ E +FE +P + K Y LL YA + T+ KAE +FE++++ L
Sbjct: 426 KVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLS 485
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
+N +++LY G++ V +++ ++K KN+ PDI T N + + A L ID ++K
Sbjct: 486 PFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEK 540
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 14/261 (5%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
TK+ GI GE+ F +PL + Y L+ + +++++ + L+
Sbjct: 160 TKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLV 219
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N ++ L+ S + + + ++ ++K V + TYN+ + A NI+ + K EM
Sbjct: 220 FNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMK 279
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLG 180
++ V Y L + A AE+ VEA EKSIT W T D LIILY LG
Sbjct: 280 QQQVEPNE-VSYCLLATAHAVAKLYTVAEA--YVEAVEKSITGNNWSTLDVLIILYGYLG 336
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFD 236
+++ W ++ + S++Y+ + ++ +G L E+ + K +T F
Sbjct: 337 KPTDLERTWGIVQELPH-VRSKSYMLAIEAFGRIGQLNRAEELWLEIKSKKELKSTEQF- 394
Query: 237 ISACNRLLGAFSDVGLTEKAN 257
N ++ +S G +KA+
Sbjct: 395 ----NSMISVYSKHGFIDKAS 411
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 42/268 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ Y + +A ELF R+ + L + L YN ++ Y V++ ++ +E+
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KN+VP I +YN I + I VKK LDEM S D V Y L++
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH-GSAQPPDVVTYNILIDALCKEGR 420
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK--------- 196
++ A LV K + +TY+ ++ Y N + I+ RM K
Sbjct: 421 ILEA-LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN--RMVKSGLEPDILN 477
Query: 197 ---------------------QKMTSRNYICILSSY-------LMLGHLKEVGEIIDQWK 228
++M +N I ++SY LG + V E++D+
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKA 256
S S D+ N LL AF +KA
Sbjct: 538 DSGQSP-DVITYNILLDAFCKTQPFDKA 564
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+AL+ + A L ++ + + +A+ YN ++ SVG+ ++V ++ ++
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R+NV PD +T+N+ I + I + + L MS G D V Y L+ Y + +
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS-KRGEKPDIVTYNALMEGYCSREN- 315
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
V+ K + + Y+ LI Y D+ ++K L T +Y
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ G + V +++D+ SA D+ N L+ A G +A +++++K
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPP-DVVTYNILIDALCKEGRILEALGVLVMMMKK 434
Query: 267 NCAP 270
P
Sbjct: 435 GVKP 438
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + + A L + +++S++ N +MY+ ++ G V + +I
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++ D TYN I C + +V + L +M ++ DD+ + L++
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI-LIDALCKEGR 280
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--N 203
++ A+ L K + +TY+ L+ Y N + +++ RM K+ + N
Sbjct: 281 ILEAQ-GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN--RMVKRGLEPDVLN 337
Query: 204 YICILSSY 211
Y ++ Y
Sbjct: 338 YNVLIDGY 345
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +++ + + + A L E + + + N YN ++ + +VE ++E
Sbjct: 230 SVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLE 289
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ + PD+ +Y I+ +D+ + +D+M G + + Y LV+ +
Sbjct: 290 QMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI-QRGCQPNVITYGTLVDGFCRV 348
Query: 144 SHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
L A VE + +T+R + ITY+ ++ ++ + ++ Q+ + + T
Sbjct: 349 GDLDGA-----VELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPP 403
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ NY I+S + G L+E ++++Q + D++ + L+ A + A E
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP-DVACLSTLIDALCKAAAIDSAQEL 462
Query: 260 HMLLLQKNCAP 270
+ + +CAP
Sbjct: 463 LRMSIGMDCAP 473
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 6/251 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ++ + A ELF +++S + N + YN ++ + ++ ++ E+
Sbjct: 1160 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 1219
Query: 86 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
RK PDI TYN I + +D+ K +M D DD V Y ++V +
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD-VTY-SIVISSLCKW 1277
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
++ ++ L K+ ITY LI + GN DK +I + L ++K
Sbjct: 1278 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ-LLLSKGSYPDVVT 1336
Query: 205 ICILSSYL-MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
I +L G L++ GE+++ ++ D N LL F D LTE A + ++
Sbjct: 1337 FSIFIDWLSKRGRLRQAGELLETMLRAGLVP-DTVTYNTLLKGFCDASLTEDAVDLFEVM 1395
Query: 264 LQKNCAPTNAS 274
Q C P NA+
Sbjct: 1396 RQCGCEPDNAT 1406
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 12/250 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL ++ E+A +L + Q N + YN ++ +V + L++E++
Sbjct: 1090 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 1149
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
N VPDI T+N I + T +D + + + +SG + + V Y +LV+ +
Sbjct: 1150 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ-ESGCTPNLVTYNSLVHGLCKSRR 1208
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK-SLRMTKQKMTSRN- 203
AE K ITY+ +I GL ++D+ +K L+M + +
Sbjct: 1209 FDQAEYLLREMTRKQGCSPDIITYNTVI---DGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKANEFH 260
Y ++SS + E +++ ++ FD A L+ F G +KA E
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNG---FDPGAITYGTLIDGFCKTGNLDKALEIL 1322
Query: 261 MLLLQKNCAP 270
LLL K P
Sbjct: 1323 QLLLSKGSYP 1332
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 16/251 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ + A A ELF+ + + L +A ++ ++ GQ L E+
Sbjct: 163 TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM 222
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K PD TYN I+ + + +D + L+EM D+G + + Y +++ + A+
Sbjct: 223 S-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV-DNGFAPNVFSYNTVLHGFCKANR 280
Query: 146 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ NA L E+ +T+ ++Y +I GL D++D+ + + Q+
Sbjct: 281 VENA----LWLLEQMVTRGCPPDVVSYTTVI---NGLCKLDQVDEACRVMDKMIQRGCQP 333
Query: 203 N---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
N Y ++ + +G L E++ + + I+ N ++ F E+A++
Sbjct: 334 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY-NNIMHVFCRRNDMERAHQV 392
Query: 260 HMLLLQKNCAP 270
+++Q C P
Sbjct: 393 LQMMIQTGCPP 403
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 109/250 (43%), Gaps = 4/250 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L+H A A EL + + + + N +++N ++ S +++ + +E+
Sbjct: 879 TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM 938
Query: 86 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + PD+FTY+ + S + +D + +++M G S + V Y +L++ A
Sbjct: 939 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMV-SKGCSPNVVTYSSLLHGLCKAG 997
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A ++ L +S +TY+ +I + LG D+ + + + + Y
Sbjct: 998 KLDEA-TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+L ++ G ++ +++ + ++ N LL F E+A + ++
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVP-NLFTYNSLLDMFCKKDEVERACQLLSSMI 1115
Query: 265 QKNCAPTNAS 274
QK C P S
Sbjct: 1116 QKGCVPNVVS 1125
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 8/205 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+ L+H AK +AE + + ++ + + YN ++ ++ L+ + ++
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
V+PD+ TY++ I S N+D K L+ M ++ D V Y L+N A
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK-EAKCVPDVVTYSALINGLCKAG-T 595
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMT--SRN 203
V+ E +TY+ LI GL +K++Q + L M KQ T S
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLI---DGLCKINKVEQAAEMLEIMRKQSCTPDSIT 652
Query: 204 YICILSSYLMLGHLKEVGEIIDQWK 228
Y C+++ L+E ++ + K
Sbjct: 653 YTCLINGLCNASRLEEAWRVLREMK 677
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 100/247 (40%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ + + A L E + S N + Y+ ++ G++++ +++ +
Sbjct: 950 TYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 1009
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R P+I TYN I ID+ L+EM D G + V Y L++ +
Sbjct: 1010 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGCQPNVVTYTVLLDAFCKCGK 1068
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+A V EK TY+ L+ ++ KD++++ + L QK N +
Sbjct: 1069 AEDAIGLVEVMVEKGYVP-NLFTYNSLLDMFC---KKDEVERACQLLSSMIQKGCVPNVV 1124
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEFHMLL 263
+ L +V E + +Q +++ DI N ++ A + A E L+
Sbjct: 1125 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 1184
Query: 264 LQKNCAP 270
+ C P
Sbjct: 1185 QESGCTP 1191
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++H + + A ++ ER+K++ + + Y+ ++ G V+K V +E+
Sbjct: 547 TYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEM 606
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P++ TYN I ++Q + L+ M S + D + Y L+N AS
Sbjct: 607 LGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS-CTPDSITYTCLINGLCNASR 665
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
L A L E + +TY L+ N + ++Q+ K + T++
Sbjct: 666 LEEA-WRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEE 716
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ ++ A LF+R++ + + + + Y+ ++ + ++ ++E +
Sbjct: 512 TYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERM 571
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K VPD+ TY+ I+ +D+ EM G + + V Y L++ +
Sbjct: 572 KEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML-GCGCAPNLVTYNTLIDGLCKINK 630
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
+ A + ++S T ITY LI GL N ++++ W+ LR K K
Sbjct: 631 VEQAAEMLEIMRKQSCTPDS-ITYTCLI---NGLCNASRLEEAWRVLREMKDK 679
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL++ A +KA ++F+ + + N + YN ++ + +VE+ A ++E +
Sbjct: 582 TYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIM 641
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++++ PD TY I+ +++ + L EM D G D + Y L+ ++
Sbjct: 642 RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK-DKGCLPDRMTYGTLLRALQKTNN 700
Query: 146 LVNAESSTLVEAEKSITQRQW 166
L E L++ ++ + QW
Sbjct: 701 LELVEQ--LLKEMEATEEGQW 719
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 127/277 (45%), Gaps = 10/277 (3%)
Query: 1 MTKVFGIHS----GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 54
M ++ G S + F+ +PL + + YT +LH Y+ E+A +FE++ +S
Sbjct: 180 MARILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESG 239
Query: 55 LSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 113
LS + YN M+ +Y +G+ K+ +++E++ K + D FT + IS+C +D+
Sbjct: 240 LSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEA 299
Query: 114 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
K+F + G + V Y L+ ++ A + + S + E E + +TY+ L+
Sbjct: 300 KEFFVGLK-SQGYAPGTVTYNALLQVFGKAG-IYSEALSIMKEMEDNNCPPDAVTYNELV 357
Query: 174 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y G ++ + ++ K + Y ++++Y + + + DQ K+S +
Sbjct: 358 AAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCA 417
Query: 234 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++ N +LG +E+ + + CAP
Sbjct: 418 P-NVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAP 453
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 41/235 (17%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ Y A + E+ L + + ++ + NA+ Y M+ Y QV+K + +++
Sbjct: 352 TYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQM 411
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----------------CDSGGSD 128
K P++ TYN + +++ K L +M C + G
Sbjct: 412 KESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMH 471
Query: 129 DWVKYV-------------NLVNIYITASHLVNAESSTLVEAEKSITQ-------RQWIT 168
+VK V + N ITAS ++ ++AEK + T
Sbjct: 472 KYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSD----IDAEKIYDEMLEAGFTPSVAT 527
Query: 169 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
Y+ L+ A G+ + + K ++ K + +Y IL+SY G++K + I
Sbjct: 528 YNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRI 582
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ LYA KAEE+ ++ S + + YN ++ + G + + + E+
Sbjct: 667 TYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
Query: 86 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSC 122
+ + P I TYN ++ AA ID+V ++ + C
Sbjct: 727 ISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDC 766
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 11 ERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 68
ER F+ L + + ++L +++ ++A E+ +++ L + + YN +M L
Sbjct: 615 ERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDL 674
Query: 69 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
Y G+ K ++ E++ D+ +YN I + + + L EM
Sbjct: 675 YARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEM 726
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
++ + ER FE L ++ Y ALL Y K +AE LF+ +K + +
Sbjct: 744 SRCGSVGKAERIFERLAPEHRSEVAYNALLLSYTKKKKRGRAERLFKELKATGTISSCYS 803
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
N + ++Y + +V ++ +E ++ V D+ YNL + + ++ V+K ++
Sbjct: 804 LNLLASMYRQLRLDAEVLMLAKEAQKLGVELDMCFYNLLLPAKFRVQGLEDVEKLYATIT 863
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE-----AEKSITQRQWITYDFLIILY 176
+ + + + NIY++A N + ++E E +Q Y+ LI +Y
Sbjct: 864 SPRDRT-RFFTCLAMANIYVSAGR--NDKVLEMLELIDQGMEAGTIVKQRRRYNVLISMY 920
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
A L + ++++ W+ L+ +Q T +Y CI+ ++ LGH+ E I Q ++
Sbjct: 921 ASLEDGARVERTWERLKQQRQPNTE-DYCCIIRAWGKLGHVVR-AETIFQVAEANEKSLK 978
Query: 237 ISAC-NRLLGAFSDVGLTEKA 256
S N ++ +S G+ E+A
Sbjct: 979 YSTVFNAMMFVYSVAGMREEA 999
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 123/264 (46%), Gaps = 22/264 (8%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 66
I ++ F+ L KT++ Y + +++ K A++ + + K++ L N + ++ +
Sbjct: 162 IRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDITFSILA 221
Query: 67 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
LY G KV + E+I+ + P + N + S I ++ +++ G
Sbjct: 222 CLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQLV--PAG 279
Query: 127 SDDWVKYVNLVNIYITASHLVNA----ESSTLVEA-EKSITQRQWI----TYDFLIILYA 177
SD +K +L + A+ ++A ++ L+E EK++ Q + TY LI +Y+
Sbjct: 280 SD--LKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHILISMYS 337
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-- 235
+ N+D ++++WK + + + +++Y+ ++ S G EVG +K++
Sbjct: 338 TMKNRDGMERVWKKI----EDLKAQDYVAMIES---CGRADEVGSAEKYFKEADRKGLLN 390
Query: 236 DISACNRLLGAFSDVGLTEKANEF 259
S LLG ++ G +KA +
Sbjct: 391 QPSLFAALLGVYAGKGQADKAEKL 414
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 43 AEELFERV-------KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR---KNVVP 92
AEE+F ++ K+S+LS Y+ M Y+S G +K ++E I++ + P
Sbjct: 268 AEEIFNQLVPAGSDLKRSHLS----TYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFP 323
Query: 93 DIF-TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 151
+ TY++ IS + N D +++ ++ D D YV ++ A + +AE
Sbjct: 324 KLRRTYHILISMYSTMKNRDGMERVWKKIE-DLKAQD----YVAMIESCGRADEVGSAEK 378
Query: 152 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 211
EA++ Q + L+ +YAG G DK ++++K + K++ SR+ +C Y
Sbjct: 379 -YFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKM---KEQDVSRDALCY--HY 432
Query: 212 LMLGHL--KEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
++L +L + + ++ + + + LG F DV
Sbjct: 433 IILANLNARNIDRAVEILELAEAAGMRDGRSRPFLGTFCDV 473
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 7 IHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ S E+YF+ ++ + ALL +YAG +KAE+LF+++K+ ++S +AL Y+
Sbjct: 373 VGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHY 432
Query: 65 MMTLYMSVGQVEKVALVVE 83
++ ++ +++ ++E
Sbjct: 433 IILANLNARNIDRAVEILE 451
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 12/250 (4%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY+ ++ L K TE E LF ++ + S N + YN ++ +E+ ++EE
Sbjct: 115 TYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEE 174
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K VPD TYN +S + + K+F D M G S D V Y L++
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMP-SRGYSPDVVAYNGLLDALYK-- 231
Query: 145 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
++ ++ K + + + +TY+ +++ A N D+ ++++K + +
Sbjct: 232 ---EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPN 288
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y +LS + + + +++++ + D+ N LL L +KA+E
Sbjct: 289 GATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP-DVVTYNILLDGLCKTNLVDKAHELF 347
Query: 261 MLLLQKNCAP 270
++ CAP
Sbjct: 348 STMVDNGCAP 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL +KA ELF + + + + + Y+ ++ +V ++ + +
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +VPD+ T+N+ + +D+ K LD+M+C SG + D+V Y L+N
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC-SGCAPDYVAYNTLMNGLRKQGR 444
Query: 146 LVNAESSTLVEAEKS 160
+ A+ T EK
Sbjct: 445 HIQADRLTQAMKEKG 459
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 105/252 (41%), Gaps = 16/252 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +L + +LFE++ + +S + + YN ++ Y G+V++ + EE+
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P I+TYN +++ + + + M+ + G D V Y +++
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA-EKGFEPDVVTYSTIISGLCKTGK 128
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + + + Y+ LI GL + I++ +K L ++M S+ Y+
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALI---NGLCKDENIERAYKLL----EEMASKGYV 181
Query: 206 -------CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
ILS +G + E + D S D+ A N LL A G T++A +
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP-DVVAYNGLLDALYKEGKTDEAMK 240
Query: 259 FHMLLLQKNCAP 270
++ K P
Sbjct: 241 LFKDVIAKGYMP 252
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 15/274 (5%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+FG+ + ++E +TYT LL + K E+A LFE + L +Y
Sbjct: 113 KIFGLLRKQHWYE------PRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVY 166
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+++ Y GQ++K VE++K + PD++TY++ I C D +++ EMS
Sbjct: 167 TALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMS 226
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
G V Y +++ Y A ESS E T + I Y G
Sbjct: 227 -YLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQ 285
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSY---LMLGHLKEVGEIIDQWKQSATSDFDIS 238
+K+++ + ++ + + + ++ SY M + V E + + S T I
Sbjct: 286 IEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPT----IV 341
Query: 239 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
N ++ F VG EK EF + + + P +
Sbjct: 342 TFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNS 375
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 114/248 (45%), Gaps = 4/248 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEE 84
TY+ L+ + E +F + + + + YN ++ Y E + + + E
Sbjct: 201 TYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEM 260
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
I+ +PDIFT N +I + + I++++K+ DE D +K N++ +
Sbjct: 261 IESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPD--IKTFNILIRSYGKA 318
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ S + +K +T++ +I ++ +GN +K+++ + ++ K S Y
Sbjct: 319 CMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITY 378
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++S+Y G+LK+V I+ Q + S + D N +L A+ G E+ E +++
Sbjct: 379 CSLVSAYSKAGYLKKVDSILRQIENSDVT-LDTPFFNCVLSAYGQAGDVERMGELFLVMK 437
Query: 265 QKNCAPTN 272
++ C P N
Sbjct: 438 ERKCKPDN 445
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 43/80 (53%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +L+ Y+ A + +K + + +++ S+++ + +N +++ Y G VE++ +
Sbjct: 375 SITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFL 434
Query: 84 EIKRKNVVPDIFTYNLWISS 103
+K + PD T+ I +
Sbjct: 435 VMKERKCKPDNITFATMIQA 454
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYA---GAKWTEKAEELFERVKQSNLSFNA 59
KV + E++FE +P + + Y +LL YA G K +KAE +F+++K+ L
Sbjct: 120 KVLNLEEAEKFFESIPENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRP 179
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
YN M +LY S+G +KV ++ E+K NV D T N + AA ++ + KFL +
Sbjct: 180 SPYNSMTSLYSSLGNRDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLAD 239
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
K IT+ +T + Y
Sbjct: 240 --------------------------------------RKEITRLDGLTMLAMAKAYVRD 261
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI-IDQWKQSATSDFDIS 238
G + + ++W + T+QK + + ++ S L LG K +I ++W+ S +FD
Sbjct: 262 GEIEDVHRVWDKYKATRQK-DNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGL-EFDNR 319
Query: 239 ACNRLLGAFSDVGLTEKANEF 259
+ L+ + + G+ KA++
Sbjct: 320 IPDMLVSGYREKGMVMKADKL 340
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 3 KVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSFNAL 60
KV G+ E +FE +P + K Y LL YA + T+ KAE +FE++++ L
Sbjct: 418 KVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLS 477
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
+N +++LY G++ V +++ ++K KN+ PDI T N + + A L ID ++K
Sbjct: 478 PFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEK 532
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 15/274 (5%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+FG+ + ++E +TYT LL + K E+A LFE + L +Y
Sbjct: 113 KIFGLLRKQHWYE------PRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEGLRPTLDVY 166
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+++ Y GQ++K VE++K + PD++TY++ I C D +++ EMS
Sbjct: 167 TALVSAYGHSGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGRFDLIERIFTEMS 226
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
G V Y +++ Y A ESS E T + I Y G
Sbjct: 227 -YLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLNSFIWAYGNSGQ 285
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSY---LMLGHLKEVGEIIDQWKQSATSDFDIS 238
+K+++ + ++ + + + ++ SY M + V E + + S T I
Sbjct: 286 IEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKRFYSPT----IV 341
Query: 239 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
N ++ F VG EK EF + + + P +
Sbjct: 342 TFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNS 375
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 114/248 (45%), Gaps = 4/248 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV-ALVVEE 84
TY+ L+ + E +F + + + + YN ++ Y E + + + E
Sbjct: 201 TYSILIKCCTTLGRFDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEM 260
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
I+ +PDIFT N +I + + I++++K+ DE D +K N++ +
Sbjct: 261 IESGTCLPDIFTLNSFIWAYGNSGQIEKMEKWYDEFQLMGIRPD--IKTFNILIRSYGKA 318
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ S + +K +T++ +I ++ +GN +K+++ + ++ K S Y
Sbjct: 319 CMYEKMVSVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITY 378
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++S+Y G+LK+V I+ Q + S + D N +L A+ G E+ E +++
Sbjct: 379 CSLVSAYSKAGYLKKVDSILRQIENSDVT-LDTPFFNCVLSAYGQAGDVERMGELFLVMK 437
Query: 265 QKNCAPTN 272
++ C P N
Sbjct: 438 ERKCKPDN 445
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 43/80 (53%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +L+ Y+ A + +K + + +++ S+++ + +N +++ Y G VE++ +
Sbjct: 375 SITYCSLVSAYSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFL 434
Query: 84 EIKRKNVVPDIFTYNLWISS 103
+K + PD T+ I +
Sbjct: 435 VMKERKCKPDNITFATMIQA 454
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 94/191 (49%), Gaps = 5/191 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+H E Y + +P S K Y LL +KAEE+F +++
Sbjct: 165 IAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPITPF 224
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY + + +K+A V+ ++++NV P +FTY + I + + ++ + + ++ M
Sbjct: 225 ACNQLLLLYKRLDK-KKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIVETM 283
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGL 179
+ G D + Y++ AE+ L E E ++ + +W F++ LY L
Sbjct: 284 KAE-GIEPDIRTQAIMARHYVSGGLKEKAEA-ILKEMEGGNLEEHRWACR-FMLPLYGAL 340
Query: 180 GNKDKIDQIWK 190
G D++ ++WK
Sbjct: 341 GKADEVSRVWK 351
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S Y+ LL +YA K K ++L +R+ S L ++ ++ LY+ G+VEK ++
Sbjct: 393 SSRHYSTLLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDALVKLYVEAGEVEKADSIL 452
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATL-NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ ++N + +++ L I AT +I +K M +G ++ L+ YI
Sbjct: 453 NKAVQQNKIKPMYSSFLIIMERYATKGDIHNAEKMFHRMR-QAGYQARIRQFQTLIQAYI 511
Query: 142 TA 143
A
Sbjct: 512 IA 513
>gi|168045822|ref|XP_001775375.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673320|gb|EDQ59845.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 19/242 (7%)
Query: 46 LFERVKQSNLSFNALMYNEMMTLYMS-----VGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
F+ VK++ + +YN ++T ++ +G + + L E + N PD+ TYN+
Sbjct: 62 FFKEVKRNGHRPDTSLYNALITAHLQAEDKRIGFAKALQLFEEMKTKANCKPDLVTYNIL 121
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ A +I QV++F +EM + + + Y ++ Y A LV E +
Sbjct: 122 LRGSAQVRDILQVERFFEEMEVEK-IHPNLISYNGVIGAYGKAGDLVQMEKTLFTMRILK 180
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR----NYICILSSYLMLGH 216
+ +T + LI Y + K++Q++KS+ K K TSR Y +++SY LG
Sbjct: 181 HIKPDTVTSNTLIESYGYGRDFVKMEQVFKSMTAAKNKQTSRPDAKTYNILMASYARLG- 239
Query: 217 LKEVGEIIDQWK----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
EVG++ +W ++A ++ + L+ + +VG +E +LQ P
Sbjct: 240 --EVGKM--EWSCSRMEAANFKLNLRSYEILMTGYGEVGAIASMSECFYQMLQAGMQPQK 295
Query: 273 AS 274
++
Sbjct: 296 ST 297
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 76
P S YT +LH + A E+A ELF +++ ++ + YN ++ +Y +G+
Sbjct: 167 PGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWP 226
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
++ +++E++ V PD FT + I++C +D+ F +++ G + V Y L
Sbjct: 227 RIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKA-RGHTPCVVTYNAL 285
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
+ ++ A + A L E E+ Q +TY+ L YA G ++ + ++
Sbjct: 286 LQVFGKAGNYTEA-LRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKG 344
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 245
+ Y ++++Y +G + E + DQ K+S +++ N +LG
Sbjct: 345 LLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVP-NVNTYNFILG 392
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L YA A + E+A + + + L NA YN +MT Y ++G+V++ + +++
Sbjct: 316 TYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQM 375
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI------ 139
K+ VP++ TYN + + + L EMS SG + + V + ++ +
Sbjct: 376 KKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMS-RSGCTPNRVTWNTMLAVCGKRGM 434
Query: 140 --YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
Y+T ++ S VE + TY+ LI Y G++ +++
Sbjct: 435 EDYVT--RVLEGMKSCGVELSRD-------TYNTLIAAYGRCGSRTNAFKMY-------N 478
Query: 198 KMTSRNYICILSSY 211
+MTS + L++Y
Sbjct: 479 EMTSAGFAPCLTTY 492
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +YA K E+F+ +KQS LS + + YN +M +Y + + ++ ++K
Sbjct: 597 FNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 656
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 657 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 711
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 13 YFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
+FE L T TY ALL ++ A +A + + ++Q +A+ YNE+ Y
Sbjct: 266 FFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYA 325
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
G E+ A ++ + K ++P+ FTYN +++ +D+ D+M G
Sbjct: 326 RAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMK--KSGCVPN 383
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V N + + L E +S +T++ ++ + G +D + ++ +
Sbjct: 384 VNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLE 443
Query: 191 SLRMTKQKMTSRNYICILSSYLMLG 215
++ +++ Y ++++Y G
Sbjct: 444 GMKSCGVELSRDTYNTLIAAYGRCG 468
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 44 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
E+ F+ VK + + +++N M+++Y G KV + + IK+ + PD+ TYN +
Sbjct: 579 EKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDM 638
Query: 104 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 163
A + +K L+++ S D V Y ++N + L+ L E
Sbjct: 639 YAKCSESWEAEKILNQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIADGMA 696
Query: 164 RQWITYDFLIILYAGL 179
+TY L+ YA L
Sbjct: 697 PCVVTYHTLVGGYASL 712
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 7/250 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ +TY L+ Y A +++ + + + YN ++ + G +V
Sbjct: 453 SRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIV 512
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS--DDWVKYVNLVNIY 140
+++ K P+ +Y+L + A NI + E+ GG+ WV LV
Sbjct: 513 SKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEV---YGGTVFPSWVILRTLVIAN 569
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L E + E + + ++ ++ +YA G K+ +I+ S++ +
Sbjct: 570 FKCRRLGGIEKA-FQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPD 628
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y ++ Y E +I++Q K S D+ + N ++ F GL ++A
Sbjct: 629 LITYNSLMDMYAKCSESWEAEKILNQLKSSQVKP-DVVSYNTVINGFCKQGLIKEAQRIL 687
Query: 261 MLLLQKNCAP 270
++ AP
Sbjct: 688 SEMIADGMAP 697
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 49/95 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ +YA + +AE++ ++K S + + + YN ++ + G +++ ++ E+
Sbjct: 631 TYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 690
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ P + TY+ + A+ + ++ ++ M
Sbjct: 691 IADGMAPCVVTYHTLVGGYASLEMFSEAREVINYM 725
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ +Y KAEELF+ ++ +A+ YN ++ + G EKV + EE+
Sbjct: 358 TYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEM 417
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ D TYN I DQ + +M SG + D V Y L++ AS
Sbjct: 418 VKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMK-SSGRNPDAVTYTVLIDSLGKASK 476
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A ++ + E + + TY LI YA G +++ ++ + +R + K Y
Sbjct: 477 VEEA-ANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYS 535
Query: 206 CILSSYLMLGHLKEV 220
+L +L +K+
Sbjct: 536 VMLDFFLRFNEMKKA 550
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 5/251 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK-VAL- 80
T + Y A++ +YA K +EL + +++ + + +N ++ M G +E +AL
Sbjct: 248 TVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQ 307
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E++R + PDI TYN IS+C+ N+++ +M D W Y ++++Y
Sbjct: 308 LLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWT-YNAMISVY 366
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ AE E E +TY+ L+ ++ GN +K+ I + +
Sbjct: 367 GRCARARKAE-ELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQD 425
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y I+ Y G + +I K S + D L+ + E+A
Sbjct: 426 EMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNP-DAVTYTVLIDSLGKASKVEEAANVM 484
Query: 261 MLLLQKNCAPT 271
+L PT
Sbjct: 485 SEMLDAGVKPT 495
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 5/208 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + +L + A A E+F R +S++ +YN MM +Y G+ KV
Sbjct: 212 APNARMVATILGVLGKANQEALAVEIFARA-ESSVGDTVQVYNAMMGVYARNGRFSKVKE 270
Query: 81 VVEEIKRKNVVPDIFTYNLWISSC--AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+++ ++ + VPD+ ++N I++ + + + + L+E+ SG D + Y L++
Sbjct: 271 LLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVR-RSGIRPDIITYNTLIS 329
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
S+L A + + E Q TY+ +I +Y K ++++K L
Sbjct: 330 ACSRESNLEEA-VAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFF 388
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQ 226
+ Y +L ++ G+ ++V +I ++
Sbjct: 389 PDAVTYNSLLYAFSREGNTEKVRDICEE 416
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/233 (17%), Positives = 90/233 (38%), Gaps = 38/233 (16%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + E+A +F ++ + YN M+++Y + K + +E+
Sbjct: 323 TYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKEL 382
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K PD TYN + + + N ++V+ +EM G D+
Sbjct: 383 ESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDE---------------- 426
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+TY+ +I +Y G D+ QI++ ++ + + + Y
Sbjct: 427 ---------------------MTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYT 465
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
++ S ++E ++ + + + + L+ A++ G E+A E
Sbjct: 466 VLIDSLGKASKVEEAANVMSEMLDAGVKP-TLHTYSALICAYAKAGKREEAEE 517
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
++L LY G + + ++++++ ++L + YN ++ +Y + E+ ++ +++
Sbjct: 954 SILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSL 1013
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
+ P + TY I++ +Q ++ +E+ + G D Y ++ Y T+
Sbjct: 1014 GLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSN-GYKLDRAFYHLMMKTYRTSGDHRK 1072
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
AE+ + E I + T L++ Y G ++ + + K+LR T + + Y ++
Sbjct: 1073 AENLLAIMKESGI-EPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVI 1131
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKANEFHMLL 263
+YL G K E + + K++ I +R+ F L+E NE +LL
Sbjct: 1132 DAYLKKGDFKAGIEKLTEMKEAG-----IEPDHRIWTCFIRAATLSEGTNEAIVLL 1182
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY+AL+ YA A E+AEE F +++S + + L Y+ M+ ++ +++K +
Sbjct: 495 TLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLY 554
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
E+ R+ PD Y + + + D V + + +M SG
Sbjct: 555 HEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEELSG 597
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ + + E+AEELFE ++ + + Y+ MM Y + G K ++
Sbjct: 1020 DTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAI 1079
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+K + P I T +L + S + ++ + L + +G D + Y ++++ Y+
Sbjct: 1080 MKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRT-TGVVLDTLPYSSVIDAYL 1135
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 11 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
E + P + T + Y A++ +YA K +EL + +++ + + +N ++ +
Sbjct: 241 EVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARL 300
Query: 71 SVG-QVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
G + +A+ ++ E++R + PD TYN IS+C+ N+++ K D+M D
Sbjct: 301 KAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPD 360
Query: 129 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 188
W Y ++++Y AE + E ++Y+ L+ +A GN +K+ +I
Sbjct: 361 LWT-YNAMISVYGRCGLSGKAE-QLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEI 418
Query: 189 WKSL 192
W+ +
Sbjct: 419 WEEM 422
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +Y + K ++++R+K+ L + YN ++ +Y + E+ ++ E++
Sbjct: 956 WNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMR 1015
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P + TY ++S ++Q ++ +E+ G D Y ++ IY +
Sbjct: 1016 VAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQ-SKGCKLDRSFYHTMMKIYRNSGSH 1074
Query: 147 VNAES--STLVEA--EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
AE S + +A E +I T L++ Y G + +++ +L+ T +++
Sbjct: 1075 SKAERLFSMMKDAGVEPTIA-----TMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTL 1129
Query: 203 NYICILSSYLMLGHLK-EVGEIIDQWKQSATSDFDISAC 240
Y ++ +YL G + ++I K+ D I C
Sbjct: 1130 PYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTC 1168
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ + + E+AEELFE ++ + Y+ MM +Y + G K +
Sbjct: 1024 DTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSM 1083
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+K V P I T +L + S ++ + +K L + ++G + + Y ++++ Y+
Sbjct: 1084 MKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK-ETGSNLSTLPYSSVIDAYL 1139
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 10/204 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + A E+A ++F+ ++ + + YN M+++Y G K + ++
Sbjct: 328 TYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDL 387
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PD +YN + + A N+++VK+ +EM G D + Y ++++Y
Sbjct: 388 ESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEM-VKIGFGKDEMTYNTMIHMYGKQGQ 446
Query: 146 LVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 201
N + L + + S +TY LI LG +KI + + + T K T
Sbjct: 447 --NELALQLYRDMQSSGRNPDAVTYTVLI---DSLGKTNKIAEAAGVMSEMLNTGVKPTL 501
Query: 202 RNYICILSSYLMLGHLKEVGEIID 225
+ Y ++ Y G E E D
Sbjct: 502 KTYSALICGYAKAGKPVEAEETFD 525
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 32 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 91
L AGA A EL V++S L + + YN +++ +E+ A V ++++ +
Sbjct: 299 RLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQ 358
Query: 92 PDIFTYNLWIS---SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
PD++TYN IS C + +Q+ L+ G D V Y +L+ + + V
Sbjct: 359 PDLWTYNAMISVYGRCGLSGKAEQLFNDLE----SRGFFPDAVSYNSLLYAFAREGN-VE 413
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
E K + +TY+ +I +Y G + Q+++ ++ + + + Y ++
Sbjct: 414 KVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLI 473
Query: 209 SSYLMLGHLKEVGE 222
S LG ++ E
Sbjct: 474 DS---LGKTNKIAE 484
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ + + +A ELF R+ + L + L YN ++ Y + V++ ++ +EI
Sbjct: 302 TYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEI 361
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ KN+VP++ TYN I + V++ +DEM CD G S D V Y NI++ A
Sbjct: 362 RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEM-CDRGQSPDIVTY----NIFLDA 414
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 3/231 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ + A LF V + + + YN ++ SVGQ + ++ +
Sbjct: 197 TYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMM 256
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R N+ PD +T+N+ + + I + + M G D V Y L+ + +++
Sbjct: 257 VRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM-KRGEKPDIVTYNALMEGFCLSNN 315
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A K + + Y+ LI Y + D+ ++K +R Y
Sbjct: 316 VSEAR-ELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYN 374
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ LG + V E++D+ S DI N L AF EKA
Sbjct: 375 SLIDGLCKLGRMSCVQELVDEMCDRGQSP-DIVTYNIFLDAFCKSKPYEKA 424
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 319 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 377
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 378 LVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 436
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++++ +G + + E +Q + D A N L+ F G KA E
Sbjct: 437 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKEL 489
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y+ LL + +A++L + + S N + YN ++ + G V K + +
Sbjct: 187 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 246
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 247 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 305
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
A E + +T L+ G + ++ ++ M Q +
Sbjct: 306 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 364
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +L+ Y G L ++ ++ D + D N L+ A+++ G+ +KA
Sbjct: 365 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKA 416
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 105 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 164
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 120
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 165 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 224
Query: 121 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
+CD G D V Y ++V+ A + AE+
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 284
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 285 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 343
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 344 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 395
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/194 (15%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ YA +KA +F ++ + + + Y ++ +G+++ ++
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V PD + YN I ++ + K+ + E+ ++G D V + +++N
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM-NNGMHLDIVFFSSIINNLCKLGR 517
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+++A++ + + + Y+ L+ Y +G +K +++ ++ + Y
Sbjct: 518 VMDAQNIFDLTVNVGL-HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 576
Query: 206 CILSSYLMLGHLKE 219
+++ Y +G + E
Sbjct: 577 TLVNGYCKIGRIDE 590
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
T++AL+ + A+ ++A +L++ + S+ + + Y ++ + G +EK ++
Sbjct: 150 TFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGV 209
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + VP++ TY+ + ++DQ M+ G + V Y L++ + A+
Sbjct: 210 MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT-SKGCVPNVVTYTTLIH-GLCAA 267
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-N 203
H V+A + E + ++Y+ L+ Y LG ++ Q++K + TK + R
Sbjct: 268 HKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM-ATKSCLPDRIT 326
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y C++ + L+E +++ K +A D D+ + ++ +S +A EF +
Sbjct: 327 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 386
Query: 264 LQKNCAP 270
+ +N AP
Sbjct: 387 IARNVAP 393
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 17/253 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY+ +++ + ++A E+ E V + ++ + + Y ++ G++++ +V E
Sbjct: 79 TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K K V PD FT++ I+ +D+ K E+ S D V Y L++ + +
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198
Query: 145 HLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+L A + ++E K + +TY L+ GL +DQ R +MTS+
Sbjct: 199 NLEKAMKMLGVMEGRKCVP--NVVTYSSLL---HGLCKAGDLDQALDLFR----RMTSKG 249
Query: 204 YICILSSYLMLGHLKEVGEIIDQWK------QSATSDFDISACNRLLGAFSDVGLTEKAN 257
+ + +Y L H +D + + D + N LL + +G E+A
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAK 309
Query: 258 EFHMLLLQKNCAP 270
+ + K+C P
Sbjct: 310 QLFKEMATKSCLP 322
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H A + A L + + + + + YN ++ Y +G++E+ + +E+
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM 315
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ +PD TY + +++ + L+ M +G D V Y +V Y A
Sbjct: 316 ATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 375
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V A + + E +TY LI GL ++D ++ + K + R
Sbjct: 376 FVEA-AEFIQEMIARNVAPNAVTYSSLI---DGLCKAGRVDH---AMEVLKNMVNKRVEP 428
Query: 206 CILSSYLMLGHLKEVGEIIDQWK 228
+ + ++G L +G++ + WK
Sbjct: 429 SVGTFNSVIGALCRLGDMDEAWK 451
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T T+T ++ + A ++A FE++++ ++ N YN ++ K V+
Sbjct: 6 TVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVL 64
Query: 83 EEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+E++ K+V PD+ TY+ I+ +D+ + L EM G + D V Y ++V+
Sbjct: 65 KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ A + E + + T+ LI G N K+D+ +L++ K+ +TS
Sbjct: 125 RDGKMDRA-CEMVREMKLKGVEPDKFTFSALI---TGWCNARKVDE---ALKLYKEILTS 177
Query: 202 RN-------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
+ Y ++ + G+L++ +++ + ++ + LL G +
Sbjct: 178 SSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP-NVVTYSSLLHGLCKAGDLD 236
Query: 255 KANEFHMLLLQKNCAP 270
+A + + K C P
Sbjct: 237 QALDLFRRMTSKGCVP 252
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 256 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 374
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 375 LVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++++ +G + + E +Q + D A N L+ F G KA E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKEL 486
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y+ LL + +A++L + + S N + YN ++ + G V K + +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 302
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
A E + +T L+ G + ++ ++ M Q +
Sbjct: 303 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +L+ Y G L ++ ++ D + D N L+ A+++ G+ +KA
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKA 413
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 161
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 120
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 221
Query: 121 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
+CD G D V Y ++V+ A + AE+
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 281
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 282 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 341 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/194 (15%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ YA +KA +F ++ + + + Y ++ +G+++ ++
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V PD + YN I ++ + K+ + E+ ++G D V + +++N
Sbjct: 456 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM-NNGMHLDIVFFSSIINNLCKLGR 514
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+++A++ + + + Y L+ Y +G +K +++ ++ + Y
Sbjct: 515 VMDAQNIFDLTVNVGL-HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYC 573
Query: 206 CILSSYLMLGHLKE 219
+++ Y +G + E
Sbjct: 574 TLVNGYCKIGRIDE 587
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 24/257 (9%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G+H E Y E +P S Y LL +KAEE+F ++K +L
Sbjct: 191 IAKLRGLHKAEVYIETIPESCSREIMYRTLLANCVSQNNVKKAEEVFSKMKDLDLPITVF 250
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
NE++ LY + +K+A ++ ++ + + P +Y++ I + + +I + + +D M
Sbjct: 251 TCNELLFLYKRNDK-KKIADLLLLMENEKIKPSRHSYSILIDTKGQSKDIGGMDQIVDRM 309
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
G D L YI+A L + + L + E +++ Q +W+ L+ LYA L
Sbjct: 310 KA-QGIEPDINTQAVLARHYISAG-LQDKVETLLKQMEGENLKQNRWLCR-ILLPLYANL 366
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE-------IIDQWKQSAT 232
G D++ +IWK T+ Y L + G L ++ E ++ +WK S+
Sbjct: 367 GKVDEVGRIWKVCE------TNPRYDECLGAIEAWGKLNKIDEAEKVFEMMVKKWKLSSK 420
Query: 233 SDFDISACNRLLGAFSD 249
+ C+ LL +++
Sbjct: 421 T------CSILLKVYAN 431
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
K+ I E+ FE + K +S+T + LL +YA + K ++L +R+ L
Sbjct: 397 KLNKIDEAEKVFEMMVKKWKLSSKTCSILLKVYANNEMLMKGKDLMKRIGDGGCRIGPLT 456
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
++ ++ LY+ G+VEK V+++ +++ + +F+ L I
Sbjct: 457 WDTIVKLYVQTGEVEKADSVLQKAAQQSQMKPMFSTYLTI 496
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 329 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 387
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 388 LVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 446
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++++ +G + + E +Q + D A N L+ F G KA E
Sbjct: 447 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGSLLKAKEL 499
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y+ LL + +A++L + + S N + YN ++ + G V K + +
Sbjct: 197 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 256
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 315
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
A E + +T L+ G + ++ ++ M Q +
Sbjct: 316 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 374
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +L+ Y G L ++ ++ D + D N L+ A+++ G+ +KA
Sbjct: 375 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVLIKAYANCGMLDKA 426
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 115 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 174
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 120
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 175 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 234
Query: 121 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
+CD G D V Y ++V+ A + AE+
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 294
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 295 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 353
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 354 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 405
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/194 (15%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ YA +KA +F ++ + + + Y ++ +G+++ ++
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 468
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V PD + YN I ++ + K+ + E+ ++G D V + +++N
Sbjct: 469 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM-NNGMHLDIVFFSSIINNLCKLGR 527
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+++A++ + + + Y L+ Y +G +K +++ ++ + Y
Sbjct: 528 VMDAQNIFDLTVNVGL-HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYC 586
Query: 206 CILSSYLMLGHLKE 219
+++ Y +G + E
Sbjct: 587 TLVNGYCKIGRIDE 600
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL + A E A++L + Q + +A YN + GQ++ V+EE+
Sbjct: 286 TYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEM 345
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V P + TY+ I CA ++ +EM S S D V Y +V IY
Sbjct: 346 SSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRS-ISVDRVSYNTMVGIYAKLGR 404
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A E E +R +TY+ L+ Y G D++ ++++ ++ + Y
Sbjct: 405 FDEA-IGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYS 463
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ Y G +E ++ +K+ A + D+ ++ + GL E + + +++
Sbjct: 464 TMIDVYTKGGMFQEAMDVYKDFKK-AQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIE 522
Query: 266 KNCAP 270
K P
Sbjct: 523 KGIKP 527
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 45 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 104
+ F+ + + + L YN ++++ S G E ++ E+ +K +V D FTYN ++ +
Sbjct: 270 KFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTL 329
Query: 105 AATLNIDQVKKFLDEMSCDSGGSDDW---VKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
ID ++ L+EMS W V Y +++ A+ L +A + +SI
Sbjct: 330 CKGGQIDLARRVLEEMSS----RRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSI 385
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
+ + ++Y+ ++ +YA LG D+ K + K Y +LS Y G EV
Sbjct: 386 SVDR-VSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVR 444
Query: 222 EIIDQWK 228
+ ++ K
Sbjct: 445 RLFEEMK 451
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 21/260 (8%)
Query: 6 GIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
GI + E+Y E +P + ++ Y LL +KAE++F +++ +L N+M
Sbjct: 47 GIEAAEKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNEIRELSLPLTVSACNQM 106
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS---SCAATLNIDQVKKFLDEMSC 122
+ LY V + KV +++ ++ +N+ P +FTY L I TL ++ V + E
Sbjct: 107 LLLYKRVSR-NKVVDILKLMENENIKPSLFTYKLMIDLKGRSNDTLGMESVLNLMKE--- 162
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+G D+ + YI+ AE T R I L+ LYA LG
Sbjct: 163 -NGFEPDFGIQTMVAKFYISGDLAEKAEEVTNAMEVYVNANRHAIRS--LLDLYAILGRP 219
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA---TSDFDISA 239
D +++IW T+ K+ +++ + ++ LGH++ E D +++ TS +
Sbjct: 220 DDVERIWNLC--TEPKL--EDFLAAIKAWGKLGHIERAEETFDALVKTSPKLTSKY---- 271
Query: 240 CNRLLGAFSDVGLTEKANEF 259
N +L +++ L +K +F
Sbjct: 272 FNAMLYVYAENELLDKGKKF 291
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 22/277 (7%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K GI GE+ F +P+ + + L+ + ++++ S + L++
Sbjct: 137 KHHGISQGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVGHSISHLVF 196
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ L+ S + + + ++ ++K V + TYN+ + A NI+ + + +M
Sbjct: 197 NRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEGLMRVFSDMRR 256
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-----EKSITQRQWITYDFLIILYA 177
++ V+ I A+ A+ T+VEA EKSI W TYD LIILY
Sbjct: 257 AKVEPNE-------VSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLIILYG 309
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATS 233
L + ++++ W ++ + S+++I + ++ +G L E+ + K AT
Sbjct: 310 YLNKEKELERTWGIIQGFPH-IPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGIKATD 368
Query: 234 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
F N +L + GL +KA E + C P
Sbjct: 369 QF-----NSILSVYCRHGLIKKATEIFRKIEANGCKP 400
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P+S E Y +L Y A E+ + +++K++ F+ YN M+ +Y G +
Sbjct: 794 GFPVS---PEAYNCMLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWI 850
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
E V+ V+ E+K + VVPD+++YN I + + K + EM G S D V Y N
Sbjct: 851 EDVSNVLAELKDRGVVPDLYSYNTLIKAYGIARMPEDAVKLMQEMRI-KGISPDRVTYAN 909
Query: 136 LV 137
L+
Sbjct: 910 LI 911
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 108/246 (43%), Gaps = 5/246 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
Y+ ++ +Y A+ E A + E KQ + + ++ +M+ Y G +EK+A
Sbjct: 626 AYSVIVRMYIKAQRLEDACSILAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYW 685
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
I++ V D YN I+ C + +D++ + DEM G + V L++IY A
Sbjct: 686 IRKSQVECDEAMYNCIINCCGRAIPVDELSRIFDEM-IQQGHLANTVTLNVLLDIYGKAG 744
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
AE ++ ++ + I+Y+ +I YA GN ++ + ++ ++ Y
Sbjct: 745 LFNRAEKVFIMARKQGLA--DIISYNTIIAAYAKSGNFHSMNYFVQMMQDAGFPVSPEAY 802
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
C+L +Y G L+E ++ + K+ A FD N ++ + G E + L
Sbjct: 803 NCMLDAYGKAGQLEEFASVLQKMKR-AKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELK 861
Query: 265 QKNCAP 270
+ P
Sbjct: 862 DRGVVP 867
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ++ YA + + ++ + + YN M+ Y GQ+E+ A V++++
Sbjct: 766 SYNTIIAAYAKSGNFHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKM 825
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
KR D +TYN+ I+ I+ V L E+ D G D Y L+ Y A
Sbjct: 826 KRAKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELK-DRGVVPDLYSYNTLIKAYGIA 882
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 6/269 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI E F +P + Y L+ + A ++++ +L + +Y
Sbjct: 128 KVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPISPYVY 187
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ L+ S G+ + ++ ++ ++K V P TYN+ + A NID V + ++M
Sbjct: 188 NRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVFNDMK- 246
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGN 181
+ + + Y L + A + S T VEA E S+T W T + L+ILY G
Sbjct: 247 RAKVEPNEITYGILAIAHAVAR--LYTVSHTYVEAIENSMTGTNWSTLEILLILYGYHGK 304
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
++ W L + +++I + ++ +G + + EI +++ + N
Sbjct: 305 AKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKL-TEQFN 362
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+L + GL +KA+ + C P
Sbjct: 363 SILSVYCRHGLVDKASAVFKEMRANGCQP 391
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 4/202 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ + ++A ++F VK MYN ++ Y +G+++ + EE+
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R+ +VPD+ TYN I+ NI+ KK D+++ S G D V + L+ Y
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT--SKGLPDLVTFHILMEGYCRKGE 485
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 204
A + L E K + + +TY+ ++ Y GN + + ++ +M +Y
Sbjct: 486 SRKA-AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 205 ICILSSYLMLGHLKEVGEIIDQ 226
+L Y G L++ ++++
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNE 566
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
L+ YA E E F+R +AL +M + + V V +E+ R+
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ P++FT+N+ I++ T +++ + +++M G S + V Y L++ Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKV-YGCSPNVVSYNTLIDGY 268
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 5/247 (2%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+Y +L++ L G K +E A + +++ + + N + YN ++ + +++ +
Sbjct: 333 SYNSLINGLCNGGKISE-AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K + VP YN+ I + ID +EM G D Y L+
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME-REGIVPDVGTYNCLIAGLCRNG 450
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
++ A+ L + S +T+ L+ Y G K + K + K Y
Sbjct: 451 NIEAAKK--LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ Y G+LK + Q ++ ++++ N LL +S G E AN +L
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 265 QKNCAPT 271
+K P
Sbjct: 569 EKGLVPN 575
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 115/248 (46%), Gaps = 17/248 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ +++G ++A +L + ++++ L ++ +M Y +GQ+ V +E+
Sbjct: 379 TYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEM 438
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT--- 142
+ V P+ Y I+ A N+++ K+ M +SG + + +L+ +Y
Sbjct: 439 VKAGVKPNEVVYGSLINGFAEVGNVEEALKYFRMME-ESGIPANQIVLTSLIKVYSKLGC 497
Query: 143 ---ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
A HL +E I I + +I LYA LG + + ++K+LR Q
Sbjct: 498 FDGAKHLYKKMKD--LEGGPDI-----IASNSMISLYADLGMISEAELVFKNLRENGQA- 549
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKANE 258
++ ++ Y +G L E +I ++ KQS D + N+++ ++ G L E A
Sbjct: 550 DGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLLR-DCVSYNKVMACYATNGQLRECAEL 608
Query: 259 FHMLLLQK 266
H ++ QK
Sbjct: 609 LHEMIGQK 616
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY L+ LY A + A E+F + +S ++ + + +N M+ S G + + +++
Sbjct: 132 TSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLD 191
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNID 111
+++ + + PD TYN+++S A NI+
Sbjct: 192 KMEERRISPDTRTYNIFLSLYADAGNIN 219
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 10/238 (4%)
Query: 23 TSETYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+S+ A++ YA W E + + L YN M+ Y +K +
Sbjct: 305 SSKVRAAIIDAYAERGLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKLYDKAFSL 364
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ ++ PD TYN I + +DQ + LDEM ++G + + ++ Y
Sbjct: 365 FKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQ-EAGFKPQCLTFSAVMACYA 423
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L +A E K+ + + Y LI +A +GN +++ K RM ++
Sbjct: 424 RLGQLSDA-VDVYQEMVKAGVKPNEVVYGSLINGFAEVGN---VEEALKYFRMMEESGIP 479
Query: 202 RNYICILS---SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
N I + S Y LG + + K DI A N ++ ++D+G+ +A
Sbjct: 480 ANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDLEGGP-DIIASNSMISLYADLGMISEA 536
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 45/77 (58%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++ +++LY ++A ++ E +KQS L + + YN++M Y + GQ+ + A ++ E+
Sbjct: 553 SFATMMYLYKSMGMLDEAIDIAEEMKQSGLLRDCVSYNKVMACYATNGQLRECAELLHEM 612
Query: 86 KRKNVVPDIFTYNLWIS 102
+ ++PD T+ + +
Sbjct: 613 IGQKLLPDGGTFKILFT 629
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L++ Y A ++A LF +K++ L L YN ++ Y +G +E + EE+
Sbjct: 372 TYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEM 431
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ +PD+ TY + ++ N+ V+ F DEM G D Y ++ +T
Sbjct: 432 TEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM-LSKGLEPDCFAYNTRISAELTIGA 490
Query: 146 LVNA---ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ NA ++ S T +TY+ LI G+ +W + ++
Sbjct: 491 ITNAFQLREEMMLRGISSDT----VTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCV 546
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y C++ ++ G L E I D S S
Sbjct: 547 TYTCLIHAHCERGRLIEAKNIFDGMVASGLS 577
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 10/189 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ A EKA +L + ++ S + +A YN ++T ++ VEK ++ E+
Sbjct: 268 TYNVVINGLARKGELEKAAQLVDIMRLSKKA-SAFTYNPLITGLLARDFVEKAGALLLEM 326
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + +VP + TYN I T N + + DEM G D + Y +L+N Y A +
Sbjct: 327 ENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRA-KGLLPDLITYNSLINGYCKAGN 385
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A + +++ +TY+ LI Y LG+ + R K++MT + +
Sbjct: 386 LKQA-LCLFGDLKRAGLGPTVLTYNILIDGYCRLGD-------LEGARRLKEEMTEEDCL 437
Query: 206 CILSSYLML 214
+ +Y +L
Sbjct: 438 PDVCTYTIL 446
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 19 LSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
LS K S TY L+ + EKA L ++ + + YN ++ G E
Sbjct: 294 LSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEA 353
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 112
+ +E++ K ++PD+ TYN I+ N+ Q
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQ 388
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 53 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 112
NL NA+ YN ++T Y + G + V++ + + + PD +T+N I++ A +
Sbjct: 17 GNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRA 76
Query: 113 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 172
+K + M + G D V Y L+ Y T + L + TY++L
Sbjct: 77 AEKMVAYMQ-EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYL 135
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
I Y G D + + + +R TS NY ++ +Y + +I+D+ K+
Sbjct: 136 IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGV 195
Query: 233 SDFDISACNRLLGAFSDVGLTEKANEFHMLLL---------QKNCAP 270
++ L+ A++ G E A +L K+C P
Sbjct: 196 Q-ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEP 241
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+++YA A AE + R+ + + N + + +MT Y G E LV++ +
Sbjct: 245 TYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 304
Query: 86 KRKNVVPDIFTYNLWISSCA 105
+ V P++ TYN +S+ +
Sbjct: 305 EAAGVSPNVLTYNTLLSATS 324
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Query: 26 TYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY+ LL YA + KAEE+ ER+ + ++ N+ YN ++ Y+ G+++ V+E
Sbjct: 95 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 154
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + P Y + + + + +K LD M + ++ V + L+N Y
Sbjct: 155 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQV-FTTLMNAYAKRG 213
Query: 145 HLVNAE---SSTLVEAEKSIT-----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
+ AE + L AE+ + TY L+ +YA G + + +
Sbjct: 214 DVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAG 273
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
+ ++++Y G E E++ + ++A ++ N LL A S +GL E
Sbjct: 274 WAPNVITFTTLMTAYSRAGD-PEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLRE 330
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A S TY L+ Y A + AE++ ER++ L+ ++ Y +M Y
Sbjct: 126 APNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 185
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC----DSGGSDDWVK---- 132
+++ +K++ V ++ + +++ A +++ + L M + GGS D
Sbjct: 186 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHT 245
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQI 188
Y L+N+Y A AE +T W IT+ L+ Y+ G+ + + +
Sbjct: 246 YSTLMNVYARAGLAAGAEGVLT-----RMTAAGWAPNVITFTTLMTAYSRAGDPEGAELV 300
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
K + Y +LS+ +G L+E GE+ ++ + +D
Sbjct: 301 LKRMEAAGVSPNVLTYNTLLSATSRMG-LRE-GEVEERRAKRVLQVYD 346
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L++ + ++A ++F+ VK MYN ++ Y +G+++ + EE+
Sbjct: 368 TYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R+ +VPD+ TYN I+ NI+ KK D+++ + G D V + L+ Y +
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT--NKGLPDLVTFHILMEGYCSRGE 485
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 204
A + L E K + + +TY+ ++ Y GN + + ++ +M +Y
Sbjct: 486 SRKA-AMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 205 ICILSSYLMLGHLKEVGEIIDQ 226
+L Y G L++ ++++
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNE 566
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 97/253 (38%), Gaps = 17/253 (6%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY +L++ L G K E A + +++ + + N + Y+ ++ + G +++ + +
Sbjct: 333 TYNSLINGLCNGGKINE-AIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDS 391
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K + P YN+ I + ID +EM + V V N I
Sbjct: 392 VKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEME-----REGIVPDVGTYNCLIAGL 446
Query: 145 HLVNAESSTLVEAEKSITQ------RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
+ + A+K Q +T+ L+ Y G K + K + K
Sbjct: 447 ----CRNGNIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLK 502
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
Y ++ Y G+LK + Q ++ ++++ N LL +S G E AN
Sbjct: 503 PRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 259 FHMLLLQKNCAPT 271
+L+K P
Sbjct: 563 LLNEMLEKGLVPN 575
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
L+ YA E E F+R +A+ +M + + V + +E+ R+
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRK 218
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ P++FT+N+ I++ T +++ + +++M G S + V Y L++ Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKV-YGYSPNVVSYNTLIDGY 268
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 90/216 (41%), Gaps = 11/216 (5%)
Query: 26 TYTALLHLY---AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+Y L+ Y G KA+ + + + ++ +S N +N ++ + + V
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVF 319
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E+ ++V+P++ TYN I+ I++ D+M +G + + Y +L+N +
Sbjct: 320 KEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKM-VSAGVQPNLITYHSLINGFCK 378
Query: 143 ASHLVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ E+ + ++ K R Y+ LI Y LG D D M ++ +
Sbjct: 379 NGMM--KEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKID--DGFALKEEMEREGIVP 434
Query: 202 R--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
Y C+++ G+++ ++ DQ D
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDL 470
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 76
P S YT +LH + A E+A ELF +++ ++ + YN ++ +Y +G+
Sbjct: 168 PGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWP 227
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
++ +++E++ V PD FT + I++C +D+ F +++ G + V Y L
Sbjct: 228 RIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKA-RGHAPCVVTYNAL 286
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
+ ++ A + A L E E++ Q +TY+ L YA G ++ + ++
Sbjct: 287 LQVFGKAGNYTEA-LRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKG 345
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ Y ++++Y +G + E + DQ K++
Sbjct: 346 LLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTG 380
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L YA A + E+A + + L NA YN +MT Y +VG+V++ + +++
Sbjct: 317 TYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQM 376
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI------ 139
K+ VP++ TYNL + + + L EMS SG + + V + ++ +
Sbjct: 377 KKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMS-RSGCTPNRVTWNTMLAVCGKRGM 435
Query: 140 --YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
Y+T ++ S VE + TY+ LI Y G++ +++
Sbjct: 436 EDYVT--RVLEGMRSCGVELSRD-------TYNTLIAAYGRCGSRTNAFKMY-------N 479
Query: 198 KMTSRNYICILSSY 211
+MTS + +++Y
Sbjct: 480 EMTSAGFTPCITTY 493
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL ++ A +A + ++Q+ +A+ YNE+ Y G E+ A ++ +
Sbjct: 282 TYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM 341
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++P+ FTYN +++ +D+ D+M +V VN Y
Sbjct: 342 ASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMK--------KTGFVPNVNTYNLVLG 393
Query: 146 LVNAES------STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
++ +S L E +S +T++ ++ + G +D + ++ + +R ++
Sbjct: 394 MLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVEL 453
Query: 200 TSRNYICILSSYLMLG 215
+ Y ++++Y G
Sbjct: 454 SRDTYNTLIAAYGRCG 469
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 2/196 (1%)
Query: 44 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
E F+ VK + + +++N M+++Y G K V + IKR + PD+ TYN +
Sbjct: 581 ETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDM 640
Query: 104 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 163
A + +K L+++ C D V Y ++N + LV L E
Sbjct: 641 YAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQG-LVKEAQRVLSEMVADGMA 699
Query: 164 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
+TY L+ Y+ L + ++ + K Y ++ SY +E
Sbjct: 700 PCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGF 759
Query: 224 IDQWKQSATSDFDISA 239
+ + ++ DFD A
Sbjct: 760 LSEVSETDL-DFDKKA 774
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +YA KA E+F+ +K+S LS + + YN +M +Y + + ++ ++K
Sbjct: 599 FNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 658
Query: 87 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + PD+ +YN I+ + + ++ L EM D G + V Y LV Y
Sbjct: 659 CSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVAD-GMAPCAVTYHTLVGGY 712
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 96/248 (38%), Gaps = 1/248 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ +TY L+ Y A +++ + + + YN ++ + G +V
Sbjct: 454 SRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIV 513
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+++ K P+ +Y+L + A N+ + +E+ WV LV
Sbjct: 514 SKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFK 573
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
L E++ E + + ++ ++ +YA G K +++ S++ +
Sbjct: 574 CRRLDGMETA-FQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLI 632
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ Y E +I++Q K S T D+ + N ++ F GL ++A
Sbjct: 633 TYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSE 692
Query: 263 LLQKNCAP 270
++ AP
Sbjct: 693 MVADGMAP 700
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 49/267 (18%)
Query: 12 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
R F +P ++ + YTA+L ++A AE+ +K NL YN M+ +Y
Sbjct: 59 RCFWEMPAELRSEDAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKR 118
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID----QVKKFLDEMSCDSGGS 127
+ +KV + +E+ V PD TY + + + D +V+KFLDE
Sbjct: 119 KNEDDKVRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIEAEVRKFLDE-------- 170
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKID 186
+T RQ + Y+ ++ +Y L + I+
Sbjct: 171 --------------------------------QLTSRQPLFIYECMLRIYTLLRDLAAIE 198
Query: 187 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 246
+ L T +K +S +Y C+L SY LG ++ + ++ T +I + ++
Sbjct: 199 NLRSILLKTFKKFSSSSYNCLLDSYRQLGEVERAERLFNEIGNKFT--LNIQSYRAMIAV 256
Query: 247 FSDVGLTEKANEFHMLLLQKN--CAPT 271
++ G EKANE + L + C P
Sbjct: 257 YASNGRMEKANELYKQLFRAGFECHPA 283
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 53 SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 112
NL NA+ YN ++T Y + G + V++ + + + PD +T+N I++ A +
Sbjct: 24 GNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRA 83
Query: 113 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 172
+K + M + G D V Y L+ Y T + L + TY++L
Sbjct: 84 AEKMVAYMQ-EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYL 142
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
I Y G D + + + +R TS NY ++ +Y + +I+D+ K+
Sbjct: 143 IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGV 202
Query: 233 SDFDISACNRLLGAFSDVGLTEKANEFHMLLL---------QKNCAP 270
++ L+ A++ G E A +L K+C P
Sbjct: 203 Q-ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEP 248
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+++YA A AE + R+ + + N + + +MT Y G E LV++ +
Sbjct: 252 TYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 311
Query: 86 KRKNVVPDIFTYNLWISSCA 105
+ V P++ TYN +S+ +
Sbjct: 312 EAAGVSPNVLTYNTLLSATS 331
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Query: 26 TYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY+ LL YA + KAEE+ ER+ + ++ N+ YN ++ Y+ G+++ V+E
Sbjct: 102 TYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLER 161
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + P Y + + + + +K LD M + ++ V + L+N Y
Sbjct: 162 MRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQV-FTTLMNAYAKRG 220
Query: 145 HLVNAE---SSTLVEAEKSIT-----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
+ AE + L AE+ + TY L+ +YA G + + +
Sbjct: 221 DVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAG 280
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
+ ++++Y G E E++ + ++A ++ N LL A S +GL E
Sbjct: 281 WAPNVITFTTLMTAYSRAGD-PEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLRE 337
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A S TY L+ Y A + AE++ ER++ L+ ++ Y +M Y
Sbjct: 133 APNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 192
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC----DSGGSDDWVK---- 132
+++ +K++ V ++ + +++ A +++ + L M + GGS D
Sbjct: 193 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHT 252
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQI 188
Y L+N+Y A AE +T W IT+ L+ Y+ G+ + + +
Sbjct: 253 YSTLMNVYARAGLAAGAEGVLT-----RMTAAGWAPNVITFTTLMTAYSRAGDPEGAELV 307
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
K + Y +LS+ +G L+E GE+ ++ + +D
Sbjct: 308 LKRMEAAGVSPNVLTYNTLLSATSRMG-LRE-GEVEERRAKRVLQVYD 353
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ Y W ++A + E + Q+NL + YN ++ + G++E+ + +E+
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++PD+ +YN I+ C I + K L+EMS + G + V + +V Y
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGK 398
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A S+T+ + E+S +TY+ LI Y GN + + + KM S
Sbjct: 399 MDDA-SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
IL + L+E +++ ++ ++S ++G F D
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L A +L +K L N YN ++ Y +G +++ A V+E +
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ N++PD++TYN+ I+ I++ K DEM + D V Y L+N + S
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLKLLPDVVSYNTLINGCLEWSK 363
Query: 146 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ +E+ L+E +EK + + +T++ ++ Y G D + +
Sbjct: 364 I--SEAFKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 204 YICILSSYLMLGHLKEVGEIIDQ 226
Y +++ Y G++ E +D+
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDE 443
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 3/247 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S T +L K E+A +L ++ + + Y ++ Y G V++ + +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWD 512
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+K K ++P TYN I +Q L+E+ +SG D Y +++ Y
Sbjct: 513 EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNTILHGYCRE 571
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A E S + T + L+ G +K +++ + + + +
Sbjct: 572 GDVEKAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVT 630
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y +++S G L + ++ + ++ D N ++ A +D G +A EF +
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGP-DHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 264 LQKNCAP 270
L+K P
Sbjct: 690 LEKGNLP 696
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ Y W ++A + E + Q+NL + YN ++ + G++E+ + +E+
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++PD+ +YN I+ C I + K L+EMS + G + V + +V Y
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS-EKGVKPNAVTHNIMVKWYCKEGK 398
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A S+T+ + E+S +TY+ LI Y GN + + + KM S
Sbjct: 399 MDDA-SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
IL + L+E +++ ++ ++S ++G F D
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L A +L +K L N YN ++ Y +G +++ A V+E +
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ N++PD++TYN+ I+ I++ K DEM + D V Y L+N + S
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLKLLPDVVSYNTLINGCLEWSK 363
Query: 146 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ +E+ L+E +EK + + +T++ ++ Y G D + +
Sbjct: 364 I--SEAFKLLEEMSEKGV-KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 204 YICILSSYLMLGHLKEVGEIIDQ 226
Y +++ Y G++ E +D+
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDE 443
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 3/247 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S T +L K E+A +L ++ + + Y ++ Y G V++ + +
Sbjct: 453 SVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWD 512
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+K K ++P TYN I +Q L+E+ +SG D Y +++ Y
Sbjct: 513 EMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNTILHGYCRE 571
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A E S + T + L+ G +K +++ + + + +
Sbjct: 572 GDVEKAFQFHNKMVENSF-KPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVT 630
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y +++S G L + ++ + ++ D N ++ A +D G +A EF +
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGP-DHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 264 LQKNCAP 270
L+K P
Sbjct: 690 LEKGXLP 696
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 14/273 (5%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI E F +P + Y L+ + + ++++ +L + +Y
Sbjct: 125 KVHGISEAESLFLRVPQECRKELLYNNLVMAALDLNHIKHSYAYMRKMRELSLPISPYVY 184
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ L+ S G+ + ++ ++ ++K VVP TYN+ + A NID + + + M
Sbjct: 185 NRLIILHSSPGRRKTISKILSQMKADRVVPHTSTYNILLKIQANEHNIDGLARVFNGMKR 244
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGN 181
++ + Y L + A + T VEA E S+T W T + L+ILY LG
Sbjct: 245 AKIEPNE-ITYGILAIAHAVAR--LYTVCHTYVEAIENSMTGTNWSTLEILLILYGYLGK 301
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI---IDQWKQ-SATSDFDI 237
+ ++ + W+ ++ + S+++ + ++ +G + + +I I K+ S T F
Sbjct: 302 EKELKRTWEIMQDLPH-IRSKSFTLAIEAFGKVGSIDQAEKIWIHIKSTKKLSLTEQF-- 358
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N +L + G+ +KA+ + C P
Sbjct: 359 ---NSMLSVYCRHGVVDKASSVFKEMRANGCQP 388
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 6/236 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
GLP T+ Y A L A+ +EKA E+++R+K+ N Y M+ +Y Q
Sbjct: 230 GLP---PTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQP 286
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 287 MSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 345
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
L+ Y A L S E + +Y+ L+ Y G + + ++ L+
Sbjct: 346 LMEAYSRAG-LPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQ 404
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ T ++++ +LS++ G++ E++ Q +S D A N +L A+ G
Sbjct: 405 GMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRP-DTFALNAMLNAYGRAG 459
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ETYT ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 270 TETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFE 329
Query: 84 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+++ PD++ YN + S ++ ++ M C+ D Y LV+ Y
Sbjct: 330 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEP----DRASYNILVDAY 385
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A AE++ E ++ + ++ L+ +A GN + +++ L + +
Sbjct: 386 GRAGLHQEAEAA-FQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPD 444
Query: 201 SRNYICILSSYLMLGHLKEVGEII 224
+ +L++Y G L ++ ++
Sbjct: 445 TFALNAMLNAYGRAGRLDDMERLL 468
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 97/248 (39%), Gaps = 38/248 (15%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ Y + KAE ++ + +++ Y ++ Y + GQ+ + V+ E++
Sbjct: 168 YNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQ 227
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + P YN ++ L + C V +Y
Sbjct: 228 KNGLPPTATVYNAYLDG-------------LLKARCSE----------KAVEVY------ 258
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
++ E+ T + TY +I +Y +++ ++ K Y
Sbjct: 259 ------QRMKKERCRTNTE--TYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTA 310
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+++++ G ++ E+ ++ +Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 311 LVNAFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 369
Query: 267 NCAPTNAS 274
C P AS
Sbjct: 370 GCEPDRAS 377
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G++ GE Y E +P S + Y LL Y AE +F ++K +
Sbjct: 204 ISKVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMKDLGFPLSTF 263
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+M+ LY V + +K+A V+ ++++N+ P++ TY + I + + +I +++ ++ M
Sbjct: 264 TCNQMLILYKRVDK-KKIADVLLLMEKENLKPNLNTYKILIDTKGLSNDITGMEQIVETM 322
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ G D + Y +A AE L E E + Y L+ +Y L
Sbjct: 323 KSE-GVEPDLRARALIARNYASAGLKEKAE-KVLKEMEGESLEENRHVYKDLLSVYGFLQ 380
Query: 181 NKDKIDQIWK 190
D++ +IWK
Sbjct: 381 RADEVTRIWK 390
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 3 KVFGIHSGERYFEG-LPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E FE L +S + +S Y+ LL +Y K + ++L +++ S + AL
Sbjct: 410 KIDKVKEAEAVFEKMLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNIGAL 469
Query: 61 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+ ++ LY+ G+VEK + + + I+ K + P + ++ + ++ +K
Sbjct: 470 TLDAVIKLYLEAGEVEKAESSLSKAIQSKQIKPLMSSFMYVMGEYVRRGDVHNTEKIFQR 529
Query: 120 MSCDSGGSDDWVKYVNLVNIYITA 143
M G + Y L+ Y+ A
Sbjct: 530 MK-QFGYQSRFRTYQALIQAYVNA 552
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K F +H+ E +G+ T TYT+L+++ + ++A++LFE++ +S + +M+
Sbjct: 442 KAFDLHN-EMLSKGI---EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 497
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N M+ + + G VE+ ++++E+ RK+V PD T+N + +++ + LDEM
Sbjct: 498 NAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK- 556
Query: 123 DSGGSDDWVKYVNLVNIY 140
G D + Y L++ Y
Sbjct: 557 RRGIKPDHISYNTLISGY 574
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +L+ E+A LF+++ + L NA+ YN ++ Y + G +E+ +
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 378
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+ +K ++P + TYNL + + + + + EM G D + Y L+N Y
Sbjct: 379 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGY 434
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 38/254 (14%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T T+ ++++ +KA E ++ N + YN ++ Y S G +E
Sbjct: 246 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 305
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+++ ++ K + PD +TY IS +++ D+M + G + V Y L++ Y
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNTLIDGY 364
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L E++ + R D++ K M +
Sbjct: 365 CNKGDL-----------ERAFSYR---------------------DEMVKKGIMP----S 388
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y ++ + M G + E ++I + ++ D N L+ +S G +KA + H
Sbjct: 389 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLH 447
Query: 261 MLLLQKNCAPTNAS 274
+L K PT+ +
Sbjct: 448 NEMLSKGIEPTHVT 461
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TYT+L+++ + ++A++LFE++ +S + +M+N M+ + + G VE+ ++
Sbjct: 381 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFML 440
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++E+ RK+V PD T+N + +++ + LDEM G D + Y L++ Y
Sbjct: 441 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK-XRGIKPDHISYNTLISGY 498
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +L+ E+A LF+++ + L NA+ YN ++ Y + G +E+ +
Sbjct: 243 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+ +K ++P + TYNL + + + + + EM G D + Y L+N Y
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGY 358
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 91/234 (38%), Gaps = 38/234 (16%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+KA E ++ N + YN ++ Y S G +E +++ ++ K + PD +TY
Sbjct: 190 KKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 249
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
IS +++ D+M + G + V Y L++ Y L E++
Sbjct: 250 ISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNTLIDGYCNKGDL-----------ERA 297
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ R D++ K M + Y ++ + M G + E
Sbjct: 298 FSYR---------------------DEMVKKGIMP----SVSTYNLLVHALFMEGRMGEA 332
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++I + ++ D N L+ +S G ++A + H +L K PT+ +
Sbjct: 333 DDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVT 385
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 96/244 (39%), Gaps = 4/244 (1%)
Query: 13 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 72
+ EGL +Y ++H Y+ E A + + ++ + ++ Y +++
Sbjct: 198 FMEGLGFKPNVV-SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKE 256
Query: 73 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 132
G++E+ + + +++ +VP+ TYN I ++++ + DEM G
Sbjct: 257 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM-VKKGIMPSVST 315
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
Y LV+ + A+ + E K ITY+ LI Y+ GN + + +
Sbjct: 316 YNLLVHALFMEGRMGEAD-DMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
+ T Y ++ +KE ++ ++ S D+ N ++ G
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP-DVIMFNAMIDGHCANGN 433
Query: 253 TEKA 256
E+A
Sbjct: 434 VERA 437
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EG PL YT+L+ + + ++A FE++K++ + + YN ++ LY G+
Sbjct: 111 EGYPLDVYA---YTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGR 167
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
E + + EE+K + + PD +TYN I++CA+ ++ + +M S + D V Y
Sbjct: 168 SWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMK-SSNCTPDRVTY 226
Query: 134 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
L+++Y A N ++ L E E + +TY+ L+ + G + ++ S+
Sbjct: 227 NALLDVYGKAG-WYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMV 285
Query: 194 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
+ Y +LS+Y G +++ EI +Q + S
Sbjct: 286 SKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTS 322
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 110/249 (44%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY + A E+A ELF ++K SN + + + YN ++ +Y G + A V++E+
Sbjct: 190 TYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEM 249
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +P+I TYN +S+ + + D M G D Y +L++ Y A
Sbjct: 250 ESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM-VSKGIEPDVFTYTSLLSAYSRAGK 308
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + S T++ LI ++ N ++ I++ ++ + +
Sbjct: 309 VEQA-MEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWN 367
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L ++ G EV ++ K+ A + D + N L+ A+ G +++A + +LQ
Sbjct: 368 SLLGAFGKNGMYSEVLKVFRGMKK-AGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQ 426
Query: 266 KNCAPTNAS 274
C P A+
Sbjct: 427 AGCTPDLAT 435
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 2/181 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ T+ A++ +Y +KA + F ++ + L + + YN +M +Y G K +
Sbjct: 538 TSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLR 597
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E PD+ +YN I S + + + EM +G D Y V Y+
Sbjct: 598 ECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEM-VSNGIQPDSFTYNTFVGCYVNG 656
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
A S + K+ + +TY L+ Y +G +++++I K ++ + +
Sbjct: 657 GMFPEA-LSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAA 715
Query: 204 Y 204
Y
Sbjct: 716 Y 716
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 10/231 (4%)
Query: 26 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
TY ++ LY G W E ELFE +K + + YN +T S E+ +
Sbjct: 154 TYNVIIDLYGKKGRSW-ENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFT 212
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++K N PD TYN + ++ L EM +G + V Y L++ + A
Sbjct: 213 QMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEME-SAGCLPNIVTYNELLSAFGRA 271
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L NA + + TY L+ Y+ G ++ +I+ +R + S
Sbjct: 272 G-LCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFT 330
Query: 204 YICILSSYLMLGHLKEVGE--IIDQWKQSATSDFDISACNRLLGAFSDVGL 252
+ ++ M G K E +I + Q+ + DI N LLGAF G+
Sbjct: 331 FNALIG---MHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGM 378
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL +Y A W +A + + ++ + N + YNE+++ + G A + + +
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM 284
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD+FTY +S+ + ++Q + ++M S + + + L+ ++ +
Sbjct: 285 VSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRT-SNCTPNSFTFNALIGMHGKNKN 343
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+E + E ++ + +T++ L+ + G ++ ++++ ++ + +
Sbjct: 344 F--SEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATF 401
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ +Y G + I D Q+ + D++ N LL A + G E A
Sbjct: 402 NILIEAYGRCGSSDQALSIYDGMLQAGCTP-DLATFNTLLAALAREGRWEHA 452
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 90/220 (40%), Gaps = 3/220 (1%)
Query: 33 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 92
+Y+ ++AE+ F ++ + +N M+++Y G ++K ++ + P
Sbjct: 512 VYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEP 571
Query: 93 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 152
D+ TYN + + + L E +G + D V Y ++ Y L +A +
Sbjct: 572 DVVTYNCLMGMYGREGMYRKCEATLRECMA-AGQTPDLVSYNTVIFSYSKHGQLSSA-TR 629
Query: 153 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 212
E + Q TY+ + Y G + + K + T K Y ++ +Y
Sbjct: 630 IFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYC 689
Query: 213 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
+G +EV I+ ++ +S+ +F +A R+ D L
Sbjct: 690 KIGKFEEVERIL-KFIKSSDPNFSKAAYRRIAARVDDYDL 728
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 42/282 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN-----LSFNALM--------YNEMMTLYMSV 72
TYT+LL Y+ A E+A E++ +++ SN +FNAL+ ++EMM ++ +
Sbjct: 295 TYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM 354
Query: 73 ----------------------GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
G +V V +K+ PD T+N+ I + +
Sbjct: 355 QACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSS 414
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
DQ D M +G + D + L+ +AE L E +S + I Y
Sbjct: 415 DQALSIYDGM-LQAGCTPDLATFNTLLAALAREGRWEHAE-LILDELNRSSYKPNDIAYA 472
Query: 171 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
++ YA G +K+ ++ +L T I + + L+ V E D +
Sbjct: 473 SMLHAYANGGELEKLKEMVDTLHTIYVPFTK---ILLKTFVLVYSKCSLVDEAEDAFLAM 529
Query: 231 ATSDF--DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ D S N ++ + G+ +KA + LL P
Sbjct: 530 RHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEP 571
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K F +H+ E +G+ T TYT+L+++ + ++A++LFE++ +S + +M+
Sbjct: 420 KAFDLHN-EMLSKGI---EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 475
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N M+ + + G VE+ ++++E+ RK+V PD T+N + +++ + LDEM
Sbjct: 476 NAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK- 534
Query: 123 DSGGSDDWVKYVNLVNIY 140
G D + Y L++ Y
Sbjct: 535 RRGIKPDHISYNTLISGY 552
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +L+ E+A LF+++ + L NA+ YN ++ Y + G +E+ +
Sbjct: 297 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 356
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+ +K ++P + TYNL + + + + + EM G D + Y L+N Y
Sbjct: 357 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYNILINGY 412
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 38/254 (14%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T T+ ++++ +KA E ++ N + YN ++ Y S G +E
Sbjct: 224 SSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARR 283
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+++ ++ K + PD +TY IS +++ D+M + G + V Y L++ Y
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNTLIDGY 342
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L E++ + R D++ K M +
Sbjct: 343 CNKGDL-----------ERAFSYR---------------------DEMVKKGIMP----S 366
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y ++ + M G + E ++I + ++ D N L+ +S G +KA + H
Sbjct: 367 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP-DAITYNILINGYSRCGNAKKAFDLH 425
Query: 261 MLLLQKNCAPTNAS 274
+L K PT+ +
Sbjct: 426 NEMLSKGIEPTHVT 439
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 9/251 (3%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ETYT L++LY A + A +LF + + N Y ++ + G EK V
Sbjct: 259 TTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVF 318
Query: 83 EEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
E+++ + PD++ YN + S ++ + M C+ D Y LV+
Sbjct: 319 EQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEP----DRASYNILVDA 374
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
Y A +AE + + ++ ++ L+ Y+ +G+ +K ++I + + K+
Sbjct: 375 YGKAGFQDDAE-AVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKL 433
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ +L+ Y LG ++ E++ + + + DIS N L+ + G E+ +
Sbjct: 434 DTYVLNSMLNLYGRLGQFGKMEEVL-RVMEKGSYVADISTYNILINRYGQAGFIERMEDL 492
Query: 260 HMLLLQKNCAP 270
LL K P
Sbjct: 493 FQLLPSKGLKP 503
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 112/272 (41%), Gaps = 40/272 (14%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T +TY L+ Y + EKAE +F ++ L +A++YN + M G +K +
Sbjct: 189 TEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIF 248
Query: 83 EEIKR-----------------------------------KNVVPDIFTYNLWISSCAAT 107
+ +K+ + P+I TY +++ A
Sbjct: 249 KRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFARE 308
Query: 108 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN-AESSTLVEAEKSITQRQW 166
++ ++ ++M ++G D Y L+ Y A + AE +L++ R
Sbjct: 309 GLCEKAEEVFEQMQ-EAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRA- 366
Query: 167 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
+Y+ L+ Y G +D + ++K ++ T ++++ +LS+Y +G + + EI++Q
Sbjct: 367 -SYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQ 425
Query: 227 WKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
+S D N +L + +G K E
Sbjct: 426 MCKSGLK-LDTYVLNSMLNLYGRLGQFGKMEE 456
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T +++ LL Y+ K EE+ ++ +S L + + N M+ LY +GQ K+ V+
Sbjct: 399 TMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVL 458
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+++ + V DI TYN+ I+ I++++ ++ G D V + + + Y
Sbjct: 459 RVMEKGSYVADISTYNILINRYGQAGFIERMEDLF-QLLPSKGLKPDVVTWTSRIGAYSK 517
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ L E+ I + +L A N+D+ +Q+ +R + M +
Sbjct: 518 KKLYLKC----LEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKDMKT 572
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 81/223 (36%), Gaps = 38/223 (17%)
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R + PD+ YNL I + L + + +L + ++D Y L+ Y +
Sbjct: 148 RSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTED--TYALLIKAYCISGL 205
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L AE+ E + Y+ I GN DK ++I+K ++ K T+ Y
Sbjct: 206 LEKAEA-VFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYT 264
Query: 206 CILSSY--------------LMLGH--------------------LKEVGEIIDQWKQSA 231
+++ Y M+ H L E E + + Q A
Sbjct: 265 MLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA 324
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+ D+ A N L+ A+S G A E L+ C P AS
Sbjct: 325 GLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRAS 367
>gi|224154848|ref|XP_002337528.1| predicted protein [Populus trichocarpa]
gi|222839519|gb|EEE77856.1| predicted protein [Populus trichocarpa]
Length = 87
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/38 (76%), Positives = 34/38 (89%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAK 38
MTKVFG+ + ERYF+GLPL+AKT+ETYTALLH YA AK
Sbjct: 48 MTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAK 85
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 116/253 (45%), Gaps = 11/253 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +LL +Y A+ E+A + +R++ + + + + YN +++ Y+ G +E+ + +E+
Sbjct: 292 TFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM 351
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + PD+ TY IS ID EM +G S + Y L+ + H
Sbjct: 352 EFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEM-VRNGCSPNLCTYNALIKL-----H 405
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
V + + ++ + + +T++ L+ ++ G ++ ++K ++
Sbjct: 406 GVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPER 465
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y+ ++SSY G + EI + ++ DIS N +L A + G E+A +
Sbjct: 466 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYP-DISTYNAVLSALARGGRWEQAEKLFA 524
Query: 262 LLLQKNCAPTNAS 274
++ ++C P S
Sbjct: 525 EMVDRDCKPDELS 537
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A++ +Y K +K EE+ + +++++ +A YN +M +Y +G EK ++ EIK
Sbjct: 610 AMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSS 669
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ PD ++YN I + + + + EM C SG D V Y + Y+
Sbjct: 670 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGVKPDIVTYNIFIKSYV 721
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ TY +L+H+Y+ EK E + +K S + + YN ++ Y GQ+++ + +
Sbjct: 639 SAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 698
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQ 112
E+K V PDI TYN++I S A + ++
Sbjct: 699 SEMKCSGVKPDIVTYNIFIKSYVANIMFEE 728
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 114/253 (45%), Gaps = 19/253 (7%)
Query: 26 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA----- 79
TY A+L A G +W E+AE+LF + + + L Y+ ++ Y + +++K+
Sbjct: 502 TYNAVLSALARGGRW-EQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSED 560
Query: 80 LVVEEIKRKN-VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LV 137
+ E I+R N +V + N ++ N+ + +K E+ D + +N +V
Sbjct: 561 IYAERIERHNWLVKTLVLVNNKVN------NLPETEKAFQELRRRRCSLD--INVLNAMV 612
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+IY + E + E SI TY+ L+ +Y+ LG+ +K + I ++ +
Sbjct: 613 SIYGKNKMVKKVEEVLSLMMENSINH-SAATYNSLMHMYSRLGDCEKCESILTEIKSSGM 671
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
+ +Y ++ +Y G +KE + + K S DI N + ++ + E+A
Sbjct: 672 RPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKP-DIVTYNIFIKSYVANIMFEEAI 730
Query: 258 EFHMLLLQKNCAP 270
+ L+ + C P
Sbjct: 731 DLVRYLVTQGCRP 743
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 11/206 (5%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEK 77
A + YTAL+ ++ A A +F+R+ + + YN + Y MSV E
Sbjct: 180 PAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEV 239
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
VALV + +K + D +TYN IS C + + DEM +G D V + +L+
Sbjct: 240 VALV-DSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKA-AGFEPDKVTFNSLL 297
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
++Y A A L E + +TY+ LI Y G ++ ++ + +
Sbjct: 298 DVYGKARKHEEA-IGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 356
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEI 223
K Y ++S L VG+I
Sbjct: 357 KPDVVTYTTLISG------LDRVGKI 376
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 6/236 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P T+ Y A L A+ +EKA E+++R+K+ N Y M+ +Y Q
Sbjct: 237 GIP---PTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQP 293
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 294 MSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 352
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
L+ Y A L S E + +Y+ L+ + G + + ++ L+
Sbjct: 353 LMEAYSRAG-LPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQ 411
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ T ++++ +LS++ G++ E++ Q +S D A N +L A+ G
Sbjct: 412 GMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRP-DTFALNAMLNAYGRAG 466
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 91/205 (44%), Gaps = 39/205 (19%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN-----LSFNALM------------------- 61
TYTAL++ +A EKAEE+FE ++Q+ ++NALM
Sbjct: 314 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM 373
Query: 62 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
YN ++ + G ++ +E+K++ + P + ++ L +S+ A + N+
Sbjct: 374 EHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNV 433
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSIT-QRQWI 167
+ ++ + ++ SG D ++N Y A L + E + + + +I
Sbjct: 434 ARCEEVMAQLH-KSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTS 492
Query: 168 TYDFLIILYAGLGNKDKIDQIWKSL 192
TY+ ++ Y G D+++ ++SL
Sbjct: 493 TYNVMVNAYGRAGYLDRMEAAFRSL 517
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 102/246 (41%), Gaps = 5/246 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ Y + +AE + + ++ Y ++ Y GQ+ + V+ E++
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R + P YN ++ ++ + M + ++ Y ++N+Y A+
Sbjct: 235 RNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTET-YTLMINVYGKANQP 293
Query: 147 VNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ S + KS+ + I TY L+ +A G +K +++++ ++ + Y
Sbjct: 294 MS--SLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYN 351
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +Y G + EI + + D ++ N L+ AF GL ++A L Q
Sbjct: 352 ALMEAYSRAGLPQGASEIFSLMEHMGC-EPDRASYNILVDAFGRAGLHQEAEAAFQELKQ 410
Query: 266 KNCAPT 271
+ PT
Sbjct: 411 QGMRPT 416
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 48/110 (43%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G A + TY +++ Y A + ++ E F + L+ + + + + Y +
Sbjct: 482 DGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKE 541
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
+ V EE+ PD T + +++C+ ++QVK + M D+
Sbjct: 542 YGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVKAIVRSMHKDA 591
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 6/260 (2%)
Query: 14 FEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
FE +P ++ +YTAL++ Y E + EL ER+K+ ++ + L YN ++
Sbjct: 165 FEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCAR 224
Query: 72 VG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
G E + + E++ + + PDI TYN +++CA D+ + M+ + G D
Sbjct: 225 GGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMN-EGGMVPDI 283
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
Y NLV + + L S L E E S +Y+ L+ YA G+ +++
Sbjct: 284 TTYRNLVETFGKLNKLEKV-SELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFR 342
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
++ + + Y +L+ Y G +V E+ + K S T D+ N L+ F +
Sbjct: 343 QMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEP-DVGTYNVLIEVFGEG 401
Query: 251 GLTEKANEFHMLLLQKNCAP 270
G ++ ++++N P
Sbjct: 402 GYFKEVVTLFHDMVEENVEP 421
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 99/247 (40%), Gaps = 43/247 (17%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ L EK+ E+FE + + + Y ++ Y GQ E ++E +K
Sbjct: 145 YTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMK 204
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
++ V P I TYN I+SCA G +W ++L
Sbjct: 205 KEKVTPSILTYNTVINSCAR-------------------GGLNWEGLLSL---------- 235
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSRN 203
E Q ITY+ L+ A G D+ + +++++ M T RN
Sbjct: 236 -------FAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRN 288
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
++ ++ L L++V E++ + + S DIS+ N LL A++ G A +
Sbjct: 289 ---LVETFGKLNKLEKVSELLKEMESSGNLP-DISSYNVLLEAYASKGDIRHAMGVFRQM 344
Query: 264 LQKNCAP 270
+ C P
Sbjct: 345 QEARCVP 351
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ LL+LY G + ELF +K SN + YN ++ ++ G ++V + ++
Sbjct: 355 TYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDM 414
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+NV P++ TY I +C + KK L M
Sbjct: 415 VEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHM 449
>gi|297737325|emb|CBI26526.3| unnamed protein product [Vitis vinifera]
Length = 1005
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
+ ++H A ++AE + R + L + + YN + + G++ + + +
Sbjct: 682 SKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVS 741
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS-GGSDDWVKYVNLVNIYITASHL 146
V P I TYN IS +D+ + ++ C G S D Y NL++ Y A
Sbjct: 742 LGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGK- 800
Query: 147 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ E+S L E ++ + ++Y+ +I +YA G + ++++++ S Y+
Sbjct: 801 -SHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYL 859
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHML 262
++ +Y E E I S ++ + +C N+LL AF+ G TE+A +
Sbjct: 860 ALIRAYTQSFKFLEAEETI----MSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHT 915
Query: 263 LLQKNCAPTNA 273
LL +P A
Sbjct: 916 LLSAGLSPDVA 926
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQS--NLSFNALMYNEMMTLYMSVGQVEKV 78
A + +TY ++ +Y + +KA E+F + + S +S + Y +++ Y G+ +
Sbjct: 745 APSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEA 804
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+L+ E++ + + P +YN+ I+ A + ++ M D G S D + Y+ L+
Sbjct: 805 SLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRD-GCSPDSLTYLALIR 863
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
Y + + AE T++ + + ++ L+ +A G ++ ++++ +L
Sbjct: 864 AYTQSFKFLEAE-ETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLS 922
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 234
Y +L YL G +++ +Q ++S D
Sbjct: 923 PDVACYRTMLRGYLDYGCVEKGITFFEQIRESVEPD 958
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 13/248 (5%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
+L+ LY +KA E+F ++ + L+Y M+ Y G+ E+ + EE+
Sbjct: 614 ASLITLYGKQHKLKKAIEVFSAIE--GCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTG 671
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS--H 145
K + + + + + + A Q + + S + G D V Y +N + A H
Sbjct: 672 KGIELGVVSISKVVHAL-ANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLH 730
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK-DKIDQIWKSLRMTKQKMT--SR 202
N+ +V + + + TY+ +I +Y G G K DK +++ R + ++ +
Sbjct: 731 FANSIYDRMVSLGVAPSIQ---TYNTMISVY-GRGRKLDKAVEMFNKARCSGVGVSLDEK 786
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++S Y G E + + ++ +S N ++ ++ GL +A E
Sbjct: 787 TYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSY-NIMINVYATAGLHHEAQELFQA 845
Query: 263 LLQKNCAP 270
+L+ C+P
Sbjct: 846 MLRDGCSP 853
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ LL +A A +TE+AE ++ + + LS + Y M+ Y+ G VEK E+I
Sbjct: 893 FNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQI- 951
Query: 87 RKNVVPDIF 95
R++V PD F
Sbjct: 952 RESVEPDRF 960
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 73/181 (40%), Gaps = 25/181 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT LL +Y + AE+ F + ++ + + M+ Y G+ + + +
Sbjct: 194 VYTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAV 253
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + ++P I +N +SS KK L + +++ +
Sbjct: 254 QERGIIPSIAVFNFMLSSLQ--------KKSL---------------HGKVIDFSLVKDG 290
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV T E + + +TY LI L + GN+D+ ++++ +R +++ NY
Sbjct: 291 LVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRY--RRIVPSNYT 348
Query: 206 C 206
C
Sbjct: 349 C 349
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 39/222 (17%)
Query: 73 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 132
G VE+ E+K VP+ TY+L IS + T N D+ K ++M ++
Sbjct: 290 GLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRYRRIVPSNYT- 348
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+L+ +Y A S E EK+ + Y LI +Y LG + ++ +K
Sbjct: 349 CASLLTLYYKNGDYSRA-VSLFSEMEKNKIVADEVIYGLLIRIYGKLGLYEDAEKTFKET 407
Query: 193 R----MTKQK------------------------MTSRN-------YICILSSYLMLGHL 217
+T +K M SRN YI +L Y+M L
Sbjct: 408 EQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRFSYIVLLQCYVMKEDL 467
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
S T D +CN +L + + L EKA +F
Sbjct: 468 ASAEATFQAL--SKTGLPDAGSCNDMLNLYIKLDLLEKAKDF 507
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 6/236 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P T+ Y A L A+ +EKA E+++R+K+ N Y M+ +Y Q
Sbjct: 237 GIP---PTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQP 293
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 294 MSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 352
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
L+ Y A L S E + +Y+ L+ + G + + ++ L+
Sbjct: 353 LMEAYSRAG-LPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQ 411
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ T ++++ +LS++ G++ E++ Q +S D A N +L A+ G
Sbjct: 412 GMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRP-DTFALNAMLNAYGRAG 466
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 95/248 (38%), Gaps = 38/248 (15%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ Y + +AE + + ++ Y ++ Y GQ+ + V+ E++
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R + P YN ++ L + C V +Y
Sbjct: 235 RNGIPPTATVYNAYLDG-------------LLKARCSE----------KAVEVY------ 265
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
++ E+ T Z TY +I +Y ++++ ++ K Y
Sbjct: 266 ------QRMKKERCRTNTZ--TYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTA 317
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+++++ G ++ E+ ++ +Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQ-AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 376
Query: 267 NCAPTNAS 274
C P AS
Sbjct: 377 GCEPDRAS 384
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 47/110 (42%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G A + TY L++ Y A + ++ E F + L+ + + + + Y +
Sbjct: 482 DGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKE 541
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
+ V EE+ PD T + +++C+ ++QV + M D+
Sbjct: 542 YGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKDA 591
>gi|297813013|ref|XP_002874390.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320227|gb|EFH50649.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1027
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P S +TY ++ +Y +KA E+F ++S L + +Y M+ Y G++
Sbjct: 793 GVPCSI---QTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKAGKM 849
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
+ + E+++K + P +YN+ + CA + +V + L M +G + Y++
Sbjct: 850 SEALSLFSEMQKKGIKPGTPSYNMVVKICATSRLHREVDELLQAME-RTGICTESSTYLS 908
Query: 136 LVNIYITASHLVNAESSTLVEAEKSIT--QRQWIT-----YDFLIILYAGLGNKDKIDQI 188
L+ Y AESS EAEK+IT Q + I + L+ +A G D+ ++I
Sbjct: 909 LIQAY--------AESSQFAEAEKTITLMQEKGIPLFHSHFSLLLSAFAKAGMMDEAERI 960
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLG 215
+ + S IL Y+ G
Sbjct: 961 YSKMSEAGISPDSACKRTILKGYMSCG 987
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 100/233 (42%), Gaps = 3/233 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+AE + + N++ + + YN ++ + G+++ + + E + V I TYN
Sbjct: 745 REAEHISRTCLEKNMALDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTM 804
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
IS L +D+ + + SG D Y N++ Y A + A S E +K
Sbjct: 805 ISVYGRGLQLDKAIEIFSN-ARRSGLYLDEKIYTNMIMHYGKAGKMSEA-LSLFSEMQKK 862
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ +Y+ ++ + A ++D++ +++ T S Y+ ++ +Y E
Sbjct: 863 GIKPGTPSYNMVVKICATSRLHREVDELLQAMERTGICTESSTYLSLIQAYAESSQFAEA 922
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 273
+ I ++ F S + LL AF+ G+ ++A + + + +P +A
Sbjct: 923 EKTITLMQEKGIPLFH-SHFSLLLSAFAKAGMMDEAERIYSKMSEAGISPDSA 974
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 104/245 (42%), Gaps = 7/245 (2%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EG+P TYT ++ YA + E+A F +K + Y+ ++ L + G
Sbjct: 275 EGVP---PNEFTYTLVVSSYAKQGFKEEALWAFGEMKSLGFIPEEVTYSSVIGLSVKAGD 331
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
++ + E+++ + +VP +T +S T N + +M + +D+ ++ +
Sbjct: 332 WDQAVGLYEDMRSRGIVPSNYTCASMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 391
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
++ IY +A+S E E+ TY + ++ GN K + + ++
Sbjct: 392 -IIRIYGKLGLFHDAQS-IFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKT 449
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
++ YI +L Y + ++ E S T D S+CN +L ++ + L E
Sbjct: 450 RDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRAL--SNTGLPDASSCNDMLNLYTRLNLGE 507
Query: 255 KANEF 259
KA F
Sbjct: 508 KAKGF 512
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 5/235 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++++H A+ +KAE ++ + + YN ++ Y S GQ ++ V +E+
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R++++PD+ N + S I + + D M+ G + D Y ++N Y T
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYTIMLNGYATKGC 376
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I + T++ LI YA G DK I+ +R K Y+
Sbjct: 377 LVDMTDLFDLMLGDGIAPDIY-TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435
Query: 206 CILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++++ +G + + E +Q Q D C L+ F G KA E
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC--LIQGFCTHGSLLKAKEL 488
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 15/238 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y LL + +A++L + + S + + YN ++ + G V K + +
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD+ TY+ + + +D+ + FL +M D+W Y NL+ Y +
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSST 304
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKIDQ---IWKSLRMTKQK 198
A V K + +RQ I D + + L L KI + ++ ++ M Q
Sbjct: 305 GQWKEA-----VRVFKEM-RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+Y +L+ Y G L ++ ++ D + DI N L+ A+++ G+ +KA
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DIYTFNVLIKAYANCGMLDKA 415
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 12/250 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TS TY L+ A E A F ++ ++ L +A++ + ++ + +
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG---SDDW 130
E + +++ VPD+F+YN+ + S Q L M+ GG S D
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA--EGGTVCSPDV 221
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V Y +++ + VN E + +TY ++ DK + +
Sbjct: 222 VAYNTVIDGFFKEGD-VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280
Query: 191 SLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 248
+M + + N Y ++ Y G KE + + ++ + D+ A N L+G+
Sbjct: 281 --QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP-DVVALNTLMGSLC 337
Query: 249 DVGLTEKANE 258
G ++A +
Sbjct: 338 KYGKIKEARD 347
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/194 (15%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ YA +KA +F ++ + + + Y ++ +G+++ ++
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ VVPD + Y+ I ++ + K+ + E+ ++G D V + +++N
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM-NNGMRLDIVFFGSIINNLCKLGR 516
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+++A++ + + + Y+ L+ Y +G +K +++ ++ + Y
Sbjct: 517 VMDAQNIFDLTVNVGL-HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575
Query: 206 CILSSYLMLGHLKE 219
+++ Y +G + E
Sbjct: 576 TLVNGYCKIGRIDE 589
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +LL + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 293 TFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEM 352
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
RK+++P++ TY+ I A +D+ +EM S G D V Y L++IY
Sbjct: 353 PRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR-VSYNTLLSIYAKLGR 411
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A + E E S ++ +TY+ L+ Y G +++ ++++ ++ + Y
Sbjct: 412 FEEA-LNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYS 470
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++ Y G +E E+ ++K++ D+ + L+ A GL E A F
Sbjct: 471 TLIDVYSKGGLYQEAMEVFREFKKAGLKA-DVVLYSALIDALCKNGLVESAVSF 523
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 95/231 (41%), Gaps = 4/231 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEE 84
++AL+ Y + + ++A ++FE +K S L N + YN ++ G + A + +E
Sbjct: 222 AFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDE 281
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ R V PD T+N ++ C + + EM G D Y L++
Sbjct: 282 MLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEM-LYRGIEQDIFTYNTLLDAVCKGG 340
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + + E + +TY +I YA G D+ ++ ++ + +Y
Sbjct: 341 QM-DLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSY 399
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
+LS Y LG +E + + + S D N LLG + G E+
Sbjct: 400 NTLLSIYAKLGRFEEALNVCKEMESSGIKK-DAVTYNALLGGYGKQGKYEE 449
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
K + TY ALL Y E+ + +FE +K + N L Y+ ++ +Y G ++ V
Sbjct: 429 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV 488
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E K+ + D+ Y+ I + ++ FLDEM+ G + V Y ++++ +
Sbjct: 489 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMT-KEGIRPNVVTYNSIIDAF 546
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
LL Y W + A+ LF+ VKQ + S + YN + + GQ LVV E KR+
Sbjct: 674 GLLMGYGDNVWVQ-AQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRR 732
Query: 89 NVVPDIFTYNLWISSC 104
+V N+W +SC
Sbjct: 733 HV-----WENMWSNSC 743
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 4/227 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEE 84
+YT+L+ +A + +A +F+++++ + YN ++ ++ +G K+ +VE+
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K + PD +TYN I+ C + + +EM +G S D V Y L+++Y S
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGFSHDKVTYNALLDVY-GKS 327
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
H L E E + +TY+ LI YA G D+ ++ + K Y
Sbjct: 328 HRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+LS + G ++ I ++ + + +I N + + + G
Sbjct: 388 TTLLSGFERAGKVESAMNIFEEMRNAGCKP-NICTFNAFIKMYGNRG 433
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 106/250 (42%), Gaps = 3/250 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + TY L+ ++A ++FE +K + S + + YN ++ +Y + ++
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMK 335
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+ E++ P I TYN IS+ A +D+ + ++M+ + G D Y L++ +
Sbjct: 336 VLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTYTTLLSGF 394
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A V + + E + + T++ I +Y G + +I+ + +
Sbjct: 395 ERAGK-VESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPD 453
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ +L+ + G EV + + K++ + N L+ A+S G E+A +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQAMTVY 512
Query: 261 MLLLQKNCAP 270
+L P
Sbjct: 513 RRMLDAGVTP 522
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/245 (16%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL +Y + ++A ++ ++ + S + + YN +++ Y G +++ + ++
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K PD+FTY +S ++ +EM ++G + + + +Y
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMR-NAGCKPNICTFNAFIKMYGNRGK 434
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V+ E +T++ L+ ++ G ++ ++K ++ +
Sbjct: 435 FVDM-MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++S+Y G ++ + + + + D+S N +L A + G+ E++ + +
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 266 KNCAP 270
C P
Sbjct: 553 GRCKP 557
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 26 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
TY +L+++ G W K L E++K ++ +A YN ++T ++ A V E
Sbjct: 245 TYNVILNVFGKMGTPWN-KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE 303
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+K D TYN + + + K L+EM + G S V Y +L++ Y
Sbjct: 304 EMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELN-GFSPSIVTYNSLISAYARD 362
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L A AEK T+ TY L+ + G + I++ +R K
Sbjct: 363 GMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPN--- 418
Query: 204 YICILSSYLML----GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
IC ++++ + G ++ +I D+ S DI N LL F G+
Sbjct: 419 -ICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGM 469
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 2/168 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T +++ +Y + KA E+ + +K+ + + YN +M ++ K ++ EI
Sbjct: 631 TLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PDI +YN I + + + EM DSG D + Y + Y S
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR-DSGIVPDVITYNTFIGSYAADSM 749
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
A + Q TY+ ++ Y L KD+ + LR
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQN-TYNSIVDGYCKLNRKDEAKLFVEDLR 796
>gi|15240478|ref|NP_198079.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635757|sp|O04647.2|PP399_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g27270; AltName: Full=Protein EMBRYO DEFECTIVE 976
gi|332006282|gb|AED93665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1038
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P S +TY ++ +Y +KA E+F ++S L + +Y M+ Y G++
Sbjct: 804 GVPCSI---QTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKM 860
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
+ + E+++K + P +YN+ + CA + +V + L M +G D Y+
Sbjct: 861 SEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAME-RNGRCTDLSTYLT 919
Query: 136 LVNIYITASHLVNAESSTLVEAEKSIT 162
L+ +Y AESS EAEK+IT
Sbjct: 920 LIQVY--------AESSQFAEAEKTIT 938
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EG+P TYT ++ YA + E+A + F +K + Y+ +++L + G
Sbjct: 287 EGVP---PNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
EK + E+++ + +VP +T +S T N + +M + +D+ ++ +
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
++ IY +A+S E E+ TY + ++ GN K + + ++
Sbjct: 404 -IIRIYGKLGLFHDAQS-MFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKT 461
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
++ YI +L Y + ++ E S T D S+CN +L ++ + L E
Sbjct: 462 RDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRAL--SKTGLPDASSCNDMLNLYTRLNLGE 519
Query: 255 KANEF 259
KA F
Sbjct: 520 KAKGF 524
>gi|225454795|ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Vitis vinifera]
Length = 1071
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
+ ++H A ++AE + R + L + + YN + + G++ + + +
Sbjct: 748 SKVVHALANYGKHQEAENVIRRSFEDGLELDTVAYNTFINAMLGAGRLHFANSIYDRMVS 807
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS-GGSDDWVKYVNLVNIYITASHL 146
V P I TYN IS +D+ + ++ C G S D Y NL++ Y A
Sbjct: 808 LGVAPSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGK- 866
Query: 147 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ E+S L E ++ + ++Y+ +I +YA G + ++++++ S Y+
Sbjct: 867 -SHEASLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRDGCSPDSLTYL 925
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHML 262
++ +Y E E I S ++ + +C N+LL AF+ G TE+A +
Sbjct: 926 ALIRAYTQSFKFLEAEETI----MSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHT 981
Query: 263 LLQKNCAPTNA 273
LL +P A
Sbjct: 982 LLSAGLSPDVA 992
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQS--NLSFNALMYNEMMTLYMSVGQVEKV 78
A + +TY ++ +Y + +KA E+F + + S +S + Y +++ Y G+ +
Sbjct: 811 APSIQTYNTMISVYGRGRKLDKAVEMFNKARCSGVGVSLDEKTYTNLISYYGKAGKSHEA 870
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+L+ E++ + + P +YN+ I+ A + ++ M D G S D + Y+ L+
Sbjct: 871 SLLFREMQEEGIKPGKVSYNIMINVYATAGLHHEAQELFQAMLRD-GCSPDSLTYLALIR 929
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
Y + + AE T++ + + ++ L+ +A G ++ ++++ +L
Sbjct: 930 AYTQSFKFLEAE-ETIMSMQNEGVLPSCVHFNQLLSAFAKAGFTEEAERVYHTLLSAGLS 988
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 234
Y +L YL G +++ +Q ++S D
Sbjct: 989 PDVACYRTMLRGYLDYGCVEKGITFFEQIRESVEPD 1024
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT LL +Y + AE+ F + ++ + + M+ Y G+ + + ++
Sbjct: 195 YTILLRVYGQVGKIKLAEQAFLEMLEAGCEPDEVACGTMLCTYARWGRHKAMLSFYSAVQ 254
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ ++P I +N +SS +V EM D G + Y +++ + L
Sbjct: 255 ERGIIPSIAVFNFMLSSLQKKSLHGKVIDLWREM-VDKGVVPNSFTYTVVIS-SLVKDGL 312
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
V T E + + +TY LI L + GN+D+ ++++ +R +++ NY C
Sbjct: 313 VEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLYEDMRY--RRIVPSNYTC 370
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 13/248 (5%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
+L+ LY +KA E+F ++ + L+Y M+ Y G+ E+ + EE+
Sbjct: 680 ASLITLYGKQHKLKKAIEVFSAIE--GCTSGKLIYISMIDAYAKCGKAEEAYHLYEEVTG 737
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS--H 145
K + + + + + + A + + + S + G D V Y +N + A H
Sbjct: 738 KGIELGVVSISKVVHALANYGKHQEAENVIRR-SFEDGLELDTVAYNTFINAMLGAGRLH 796
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK-DKIDQIWKSLRMTKQKMT--SR 202
N+ +V + + + TY+ +I +Y G G K DK +++ R + ++ +
Sbjct: 797 FANSIYDRMVSLGVAPSIQ---TYNTMISVY-GRGRKLDKAVEMFNKARCSGVGVSLDEK 852
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++S Y G E + + ++ +S N ++ ++ GL +A E
Sbjct: 853 TYTNLISYYGKAGKSHEASLLFREMQEEGIKPGKVSY-NIMINVYATAGLHHEAQELFQA 911
Query: 263 LLQKNCAP 270
+L+ C+P
Sbjct: 912 MLRDGCSP 919
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ LL +A A +TE+AE ++ + + LS + Y M+ Y+ G VEK E+I
Sbjct: 959 FNQLLSAFAKAGFTEEAERVYHTLLSAGLSPDVACYRTMLRGYLDYGCVEKGITFFEQI- 1017
Query: 87 RKNVVPDIF 95
R++V PD F
Sbjct: 1018 RESVEPDRF 1026
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 90/237 (37%), Gaps = 39/237 (16%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
N+ Y +++ + G VE+ E+K VP+ TY+L IS + T N D+ K
Sbjct: 296 NSFTYTVVISSLVKDGLVEESFKTFYEMKNLGFVPEEVTYSLLISLSSKTGNRDEAIKLY 355
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
++M ++ +L+ +Y A S E EK+ + Y LI +Y
Sbjct: 356 EDMRYRRIVPSNYT-CASLLTLYYKNGDYSRA-VSLFSEMEKNKIVADEVIYGLLIRIYG 413
Query: 178 GLGNKDKIDQIWKSLR----MTKQK------------------------MTSRN------ 203
LG + ++ +K +T +K M SRN
Sbjct: 414 KLGLYEDAEKTFKETEQLGLLTNEKTYIAMAQVHLNSGNFEKALTIMELMRSRNIWFSRF 473
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
YI +L Y+M L S T D +CN +L + + L EKA +F
Sbjct: 474 SYIVLLQCYVMKEDLASAEATFQAL--SKTGLPDAGSCNDMLNLYIKLDLLEKAKDF 528
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 134/282 (47%), Gaps = 11/282 (3%)
Query: 1 MTKVFGI-HSGER---YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 54
M K +GI S E+ FE + T + TY L+ + A A +KA+ E+++++
Sbjct: 510 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETG 569
Query: 55 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 114
+ + Y +++ ++ +GQ+ V +E+ N+ PD+ Y + I++ A T N+ Q
Sbjct: 570 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 629
Query: 115 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDFL 172
+++ M ++G ++ V Y +L+ +Y +L AE+ L+ + T + +
Sbjct: 630 SYVEAMK-EAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCM 688
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
I LY+ K + I++S++ +++ + +L Y G +E +I Q ++
Sbjct: 689 INLYSQRSMVRKAEAIFESMKQ-RREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRI 747
Query: 233 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
D + N +LG ++ G ++A E ++ P +++
Sbjct: 748 LT-DPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDST 788
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S TY ++ Y + ++A E F+R+ + + + +N M+ +Y + GQ +V ++
Sbjct: 296 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLM 355
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ +K + PD TYN+ IS +I++ + EM +G D V Y L+ + +
Sbjct: 356 KTMKF-HCAPDTRTYNILISLHTKNNDIERAGTYFKEMK-GAGLKPDPVSYRTLLYAF-S 412
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM--TKQKMT 200
H+V + E + + + T L +Y + +++ W + M+
Sbjct: 413 IRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYI---EAEMLEKSWSWFKRFHVAGNMS 469
Query: 201 SRNYICILSSYLMLGHLKEVGEII 224
S Y + +Y G+L E +
Sbjct: 470 SEGYSANIDAYGERGYLSEAERVF 493
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 30 LLHLYAGAKWTEKAEELF------ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+L +Y A+ +KAEE F E S++ ++ YN M+ Y GQ+++ + +
Sbjct: 262 VLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFK 321
Query: 84 EIKRKNVVPDIFTYNLWI 101
+ + +VP T+N I
Sbjct: 322 RMLEEGIVPTTVTFNTMI 339
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ Y K KA+ +F + Q ++ N YN M+ + + +V++ + +E+
Sbjct: 303 TYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEM 362
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KN++PD+ TYN I + I K +DEM D G D + Y ++++ + +H
Sbjct: 363 HCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH-DRGVPHDKITYNSILDA-LCKNH 420
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V+ + L + + Q TY LI G I++ L + +T Y
Sbjct: 421 QVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYT 480
Query: 206 CILSSY 211
++ +
Sbjct: 481 VMIQGF 486
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++Y +++ + K ++A LF+ + N+ + + YN ++ G++ +V+E
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE 396
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + V D TYN + + +D+ L +M D G D Y L++
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK-DEGIQPDMYTYTILIDGLCKGG 455
Query: 145 HLVNAES 151
L +A++
Sbjct: 456 RLKDAQN 462
>gi|302797114|ref|XP_002980318.1| hypothetical protein SELMODRAFT_112505 [Selaginella moellendorffii]
gi|300151934|gb|EFJ18578.1| hypothetical protein SELMODRAFT_112505 [Selaginella moellendorffii]
Length = 344
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 8/232 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 118 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 174
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
++ +I++ + PD FTY ISS A + Q +++ ++ +C +
Sbjct: 175 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNK-ACKTKAGPSIEMCNA 233
Query: 136 LVNIYITASHLVNAE---SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
L++ Y+ A + A+ + + +S + I Y+ +I+ Y G I +
Sbjct: 234 LIDGYLKAREVEPAKFILTKLYADYLRSGLEPNLIVYNNVILSYGSSGFSGHAQNILGDI 293
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 244
R Y ++SS+ G + + ++ ++ I CN L+
Sbjct: 294 RKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGP-SIEMCNALI 344
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++++H A+ KAE ++ + + YN ++ Y S GQ ++ V +E+
Sbjct: 260 TYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 319
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R +++PD+ T N+ + S I + + D M+ G + D Y ++N Y T
Sbjct: 320 RRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYKIMLNGYATKGC 378
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I + T+ LI YA G DK I+ +R K Y
Sbjct: 379 LVDMTDLFDLMLGDGIAPDIY-TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYT 437
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++++ +G + + E +Q + D A + L+ F G KA E
Sbjct: 438 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKEL 490
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y+ LL + +A++L + + S + + Y ++ + G V K + +
Sbjct: 188 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFK 247
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD+ TY+ + + + + + FL +M D+W Y NL+ Y +
Sbjct: 248 EMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSST 306
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
A E + +T + L+ G + ++ ++ M Q +
Sbjct: 307 GQWKEA-VRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 365
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +L+ Y G L ++ ++ D + DI + L+ A+++ G+ +KA
Sbjct: 366 YKIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DIYTFSVLIKAYANCGMLDKA 417
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 105/293 (35%), Gaps = 39/293 (13%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TS TY L+ A E A F ++ ++ L + ++ N ++ + +
Sbjct: 106 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKR 165
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 120
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 166 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 225
Query: 121 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
+CD G D V Y ++V+ A + AE+
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMV 285
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 286 NKGVLPDNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKI 344
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
KE ++ D + D+ + +L ++ G + L+L AP
Sbjct: 345 KEARDVFDTMAMKGQNP-DVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+ G+ GE + +P S K Y LL A +K+E +F ++K +
Sbjct: 208 KIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDLGFPLSGFTC 267
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
++M+ L+ + + +K+A V+ ++++N+ P + TY + I AT +I +++ L+ M
Sbjct: 268 DQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQILETMK- 325
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
D G D+ + L + + + L + L E E + + L+ +YA LG +
Sbjct: 326 DEGVELDF-QTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGRE 384
Query: 183 DKIDQIWK 190
D++ +IWK
Sbjct: 385 DEVKRIWK 392
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
+S TY+ LL +Y K K ++L +R+ +S A ++ ++ LY+ G+VEK
Sbjct: 434 SSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKA 489
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 15 EGLPLSAKTS----ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
E LPL + YT +LH + E+A ELF +K+ ++ +MYN M+ +Y
Sbjct: 174 EMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYG 233
Query: 71 SVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+G+ ++ ++EE++ V PD FT + I++C +D+ F +++ G
Sbjct: 234 RMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLK-SRGHVPC 292
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
V Y L+ ++ A + + A L E E+S + +TY+ L YA G ++ +
Sbjct: 293 VVTYNALLQVFGKAGNYMEA-LRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCL 351
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
++ + Y I+++Y G + E + D K++ + ++ N +LG
Sbjct: 352 DTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPY-VNTYNLILGMLG- 409
Query: 250 VGLTEKANEFHMLL 263
K + F+++L
Sbjct: 410 -----KKSRFNVML 418
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +YA KA E+F+ +KQ LS + + YN MM +Y + + +++ +K
Sbjct: 611 FNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLK 670
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ PD+ +YN ++ I + ++ L EM D G V Y LV Y +
Sbjct: 671 TSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIAD-GVRPCVVTYHTLVGGYAS 725
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL ++ A +A + + +++S +A+ YNE+ Y G E+ A ++ +
Sbjct: 295 TYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTM 354
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 142
K ++P+ FTYN +++ +D+ D M + ++ YVN N+ +
Sbjct: 355 VSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMK-----KNGFIPYVNTYNLILGMLG 409
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
N L E +S +T++ ++ + G + + ++ + ++ ++
Sbjct: 410 KKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRD 469
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ ++S+Y G ++ D+ + + ++ N LL S G
Sbjct: 470 TFNTLISAYGRCGSRANAFKMYDEMTAAGFTPC-LTTYNALLSVLSRQG 517
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L YA A + E+A + + + + NA YN +MT Y + G+V++ + + +
Sbjct: 330 TYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWM 389
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ +P + TYNL + + + + L EMS SG + + V + + + +
Sbjct: 390 KKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMS-RSGCTPNRVTWNTM--LAVCGKR 446
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + ++E KS + T++ LI Y G++ +++ +MT+ +
Sbjct: 447 GMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMY-------DEMTAAGF 499
Query: 205 ICILSSY-LMLGHLKEVGE------IIDQWKQSATSDFDIS 238
L++Y +L L G+ II++ K D+S
Sbjct: 500 TPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMS 540
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 50/95 (52%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ +YA + + +AE++ +R+K S L + + YN +M + G +++ ++ E+
Sbjct: 645 TYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEM 704
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
V P + TY+ + A+ + ++ + M
Sbjct: 705 IADGVRPCVVTYHTLVGGYASREMFSEAREVVSYM 739
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 104/250 (41%), Gaps = 13/250 (5%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY ALL L WT A+ + ++K N + Y+ ++ + G + + +E
Sbjct: 505 TYNALLSVLSRQGDWT-AAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKE 563
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ V P + S ++ +++ E+ G D V + +++++Y
Sbjct: 564 VYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMA-RGHKPDLVIFNSMLSMYAK-- 620
Query: 145 HLVNAESSTLVEAEKSITQ----RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
N E SI Q ITY+ ++ +YA + ++I K L+ ++ K
Sbjct: 621 ---NGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPD 677
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+Y +++ + G +KE I+ + ++ + L+G ++ + +A E
Sbjct: 678 VVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTY-HTLVGGYASREMFSEAREVV 736
Query: 261 MLLLQKNCAP 270
++Q+N +P
Sbjct: 737 SYMIQRNLSP 746
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 107/234 (45%), Gaps = 9/234 (3%)
Query: 44 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
+ LF +K ++ YN ++ + G ++KV V+ E+ R+ + PD+F++N I++
Sbjct: 83 DRLFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAA 142
Query: 104 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT- 162
A + ++ + M +G D V Y L+ ++ +S ++ E+ + E E +
Sbjct: 143 YAMSRKPERGLQVFSNMKA-AGVLPDIVTYTTLIQMFSRSS--MHKEAIEMFE-EMVVNK 198
Query: 163 -QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
Q + Y L+ +Y G I+ L++ + Y ++S++L G L+E
Sbjct: 199 CQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESR 258
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLT-EKANEFHMLLLQKNCAPTNAS 274
+ Q + D+ N ++ A++ G+ + AN H L Q C P AS
Sbjct: 259 KHFSQMEAYGCRA-DVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVC-PNRAS 310
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ +++ + ++A E+FE + + + +Y+ ++++Y G V L+ +
Sbjct: 170 TYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRL 229
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ + P+I TY IS+ +++ +K +M +D V+L+N I A
Sbjct: 230 QLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRAD-----VHLLNTMIDA 282
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 15/257 (5%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ETYT L++LY A + A LF + N Y ++ ++ G EK V
Sbjct: 40 TTETYTMLINLYGKAGKSFMALILFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVF 99
Query: 83 EEIKRKNVVPDIFTYNLWI---------SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
E+++ + PD++ YN + S ++ + M C+ D Y
Sbjct: 100 EQMQEAGLEPDVYAYNALMETYKFSSPFSRAGYPYGAAEIFSLMQHMGCEP----DRASY 155
Query: 134 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
LV+ Y A +AE + + ++ ++ L Y+ +GN +K ++I +
Sbjct: 156 NILVDAYGKAGFQDDAE-AVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCEEILNQMC 214
Query: 194 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 253
+ K+ + +L+ Y LG ++ E++ + + + DIS N L+ + G
Sbjct: 215 KSGLKLNTYVLKSMLNLYGRLGQFGKMEEVL-RVMEKGSYVADISTYNILINRYGQAGXI 273
Query: 254 EKANEFHMLLLQKNCAP 270
E+ +F LL K P
Sbjct: 274 ERMEDFFQLLPSKGLKP 290
>gi|302801862|ref|XP_002982687.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
gi|300149786|gb|EFJ16440.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
Length = 541
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 39/236 (16%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
KT Y LL +A A E+A ++ +++K+ L N YN ++ +Y+ +G +++ +
Sbjct: 206 KTETCYVLLLQAFATAHRKERALDVLKQMKELVLITNPYSYNLVIAMYLRMGLIDEAKEM 265
Query: 82 VEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+K K NV PD FTY LN+ + S D+ G DD
Sbjct: 266 FAELKDKSNVAPDAFTY----------LNLLK--------SRDALGMDD----------- 296
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L + ++ +K T +W LI LY +G K ++++W+ + + M
Sbjct: 297 -----LEDTIEEFFLDVDKIPTGFEWRN---LIRLYGAMGKKKDVERLWREQKRVAEYMP 348
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ + S+ M G +K+ EI Q ++ C +L + GL A
Sbjct: 349 ESYFLAAIESFGMNGEMKQFEEICKQL-EAQNQKLSERQCFTMLKVYCMNGLMNDA 403
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R +++PD+ T ++ + S I + + D M+ G + + Y ++N Y T
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPNVFSYTIMLNGYATKGC 374
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I + T++ LI YA G DK I+ +R K Y
Sbjct: 375 LVDMTDLFDLMLGDGIAPDIY-TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++++ +G + + E +Q + D A + L+ F G KA E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYHCLIQGFCTHGSLLKAKEL 486
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 98/233 (42%), Gaps = 5/233 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y+ LL + +A++L + + S + + Y+ ++ + G V K + +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFK 243
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD TY+ + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT-YNNLIYGYSST 302
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
A E + +T L+ G + ++ ++ M Q +
Sbjct: 303 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFS 361
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +L+ Y G L ++ ++ D + DI N L+ A+++ G+ +KA
Sbjct: 362 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DIYTFNVLIKAYANCGMLDKA 413
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 106/293 (36%), Gaps = 39/293 (13%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TS TY L+ A E A F ++ ++ L N ++ N ++ + +
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKR 161
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 120
E + +++ VPD+F+Y++ + S Q L M
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221
Query: 121 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
+CD G D+V Y ++V+ A + AE+
Sbjct: 222 YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 282 NKGVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
KE ++ D + ++ + +L ++ G + L+L AP
Sbjct: 341 KEARDVFDTMAMKGQNP-NVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 1 MTKVFGIHS----GERYFEGLPLSAKTSETY--TALLHLYAGAKWTEKAEELFERVKQSN 54
M K+ G S + F+ +P+ + + T +LH YA ++A E+FE++K++
Sbjct: 208 MVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETG 267
Query: 55 LSFNALMYNEMMTLYMSVGQVEKVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 113
L + YN M+ +Y +G+ + L +++E++ K + D FT IS+C +D+
Sbjct: 268 LDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEA 327
Query: 114 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
++F D++ + G Y +++ ++ A A + L E E + + ITY+ L+
Sbjct: 328 RRFFDDLKLN-GYKPGTATYNSMLQVFGKAGVYTEA-LNILKEMEDNNCEPDAITYNELV 385
Query: 174 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 229
Y G D+ + ++ + Y ++++Y G + E+ Q K+
Sbjct: 386 AAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKE 441
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/270 (17%), Positives = 118/270 (43%), Gaps = 5/270 (1%)
Query: 7 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ R+F+ L L+ + TY ++L ++ A +A + + ++ +N +A+ YNE
Sbjct: 324 LDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNE 383
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ Y+ G ++ A V++ + K V+P+ TY I++ + D+ + +M +
Sbjct: 384 LVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMK-EL 442
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
G + Y N++ + + L + + + IT++ ++ + G +
Sbjct: 443 GCVPNVCTYNNVL-VLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKF 501
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 244
+ Q+ + ++ + + ++S+Y G +V ++ + + + I+ N LL
Sbjct: 502 VSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPC-ITTYNALL 560
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
A + G + A + + +K P S
Sbjct: 561 NALARRGNWKAAESVVLDMRKKGFKPNETS 590
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
++L ++ + EKA E+ + + S L N + YN ++ LY VG K ++++I+
Sbjct: 663 SMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNS 722
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
+ PD+ +YN I + + + L EM+ +
Sbjct: 723 GISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANG 758
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ LYA KAEE+ + ++ S +S + + YN ++ + G V++ ++ E+
Sbjct: 695 TYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEM 754
Query: 86 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSC 122
V P T+N ++S A D+V +++ E C
Sbjct: 755 TANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGC 794
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL+ A + AE + +++ N Y+ ++ Y G V + V EI
Sbjct: 555 TYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEI 614
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+V P + + + +++ ++ ++G D V +++++++
Sbjct: 615 YDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQ-NNGYKLDMVVINSMLSMFVRNQK 673
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L S Q +TY+ LI LYA +G+ K +++ K ++ + +Y
Sbjct: 674 LEKAH-EMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYN 732
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ + G ++E I+ + + I+ N + ++ GL +A+E +++
Sbjct: 733 TVIKGFCKKGLVQEAIRILSEMTANGVQPCPITF-NTFMSCYAGNGLFAEADEVIRYMIE 791
Query: 266 KNCAP 270
C P
Sbjct: 792 HGCMP 796
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 44 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
E F +++ + + ++ N M+++++ ++EK +++ I + P++ TYN I
Sbjct: 643 ERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDL 702
Query: 104 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 163
A + + ++ L ++ +SG S D V Y ++ + LV L E + Q
Sbjct: 703 YARVGDCWKAEEMLKDIQ-NSGISPDVVSYNTVIKGFCKKG-LVQEAIRILSEMTANGVQ 760
Query: 164 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
IT++ + YAG G + D++ + + Y ++ Y+ KE +
Sbjct: 761 PCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDF 820
Query: 224 IDQWKQSATSDFDISACNRL 243
+ + K+ S FD + +L
Sbjct: 821 VSKIKEIDIS-FDDQSLKKL 839
>gi|115456295|ref|NP_001051748.1| Os03g0824100 [Oryza sativa Japonica Group]
gi|113550219|dbj|BAF13662.1| Os03g0824100, partial [Oryza sativa Japonica Group]
Length = 691
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 115/285 (40%), Gaps = 31/285 (10%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLS-------FNALM----- 61
F LP ++T+ +YT+L+ YA E+A EL +++K S ++ F+ L+
Sbjct: 2 FHDLPSESRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTDPPVPFDMLLGLFAE 61
Query: 62 ---------------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 106
YN ++ ++ +++ + V+PD +Y + + A
Sbjct: 62 MRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAG 121
Query: 107 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 166
N+ +V + EMS +G + D Y+ L+ + A + L + +
Sbjct: 122 AGNLSRVAELFAEMSA-TGHTPDPSAYLGLMEAHTLVGATAEA-VAVLRQMQADGCPPTA 179
Query: 167 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
TY L+ LY G D + ++++ +R T T+ Y + + G KEV E+
Sbjct: 180 ATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA-TYNVLFRVFGDGGFFKEVVELFQD 238
Query: 227 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
S DI C ++ A GL E A E + + PT
Sbjct: 239 MLHSEVEP-DIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPT 282
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 23/256 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ YA E A L ++++ N+ N +++ ++ Y G+ +K V+ E+
Sbjct: 388 TYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREM 447
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K NV PD YN+ I + +D + D M G D V + L++ + H
Sbjct: 448 KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRM-LSEGIEPDVVTWNTLIDCH--RKH 504
Query: 146 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ ++ L E + +R ++ TY+ +I LG ++K W +++ KM S
Sbjct: 505 GYHDRAAELFE---EMQERGYLPCPTTYNIMI---NSLGEQEK----WDEVKILLGKMQS 554
Query: 202 RNYICILSSYLML----GHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEK 255
+ + + +Y L GH + ID + ++ SA N L+ AF+ GL+E+
Sbjct: 555 QGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQ 614
Query: 256 ANEFHMLLLQKNCAPT 271
A + +++ P+
Sbjct: 615 AVNAYRVMISDGLRPS 630
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 19/235 (8%)
Query: 44 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
++L+E ++ + + L+ N+++ + G + + ++ + P T+ IS+
Sbjct: 266 QKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISA 325
Query: 104 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITASHLVNAESSTLVEAEKSIT 162
++ + +EM GG +K N L+ Y L AES + E EKS
Sbjct: 326 LGNHGRTEEAEAIFEEMK--EGGLKPRIKAFNALLKGYARKGSLKEAES-IISEMEKSGL 382
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-------YICILSSYLMLG 215
TY L+ YA +G W+S R ++M +RN + IL+SY G
Sbjct: 383 SPDEHTYGLLVDAYANVGR-------WESARHLLKQMEARNVQPNTFIFSRILASYRDRG 435
Query: 216 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++ E++ + K S D N ++ F + A E + +L + P
Sbjct: 436 EWQKTFEVLREMKNSNVKP-DRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEP 489
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
L+ KTS T+ A++ TE+AE +FE +K+ L +N ++ Y G +++
Sbjct: 312 LNPKTS-TFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEA 370
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ E+++ + PD TY L + + A + + L +M
Sbjct: 371 ESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQM 412
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 101/247 (40%), Gaps = 12/247 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFER-VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y+ L+H ++E+L+E + + L YN ++ +EK ++ +
Sbjct: 182 YSILIHALG------RSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRM 235
Query: 86 KRKNVVPDIFTYNLWISSCAAT--LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ D Y+L I S T ++I ++K +E+ D D + +N + +
Sbjct: 236 RQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLL--LNDIILGFAK 293
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ N L + S + T+ +I G ++ + I++ ++ K +
Sbjct: 294 AGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKA 353
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ +L Y G LKE II + ++S S D L+ A+++VG E A +
Sbjct: 354 FNALLKGYARKGSLKEAESIISEMEKSGLSP-DEHTYGLLVDAYANVGRWESARHLLKQM 412
Query: 264 LQKNCAP 270
+N P
Sbjct: 413 EARNVQP 419
>gi|302798915|ref|XP_002981217.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
gi|300151271|gb|EFJ17918.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
Length = 541
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 39/236 (16%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
KT Y LL +A A E+A ++ +++K+ L N+ YN ++ +Y+ +G +++ +
Sbjct: 206 KTETCYVLLLQAFATAHRKERALDVLKQMKELVLITNSYSYNLVIAMYLRMGLIDEAKEM 265
Query: 82 VEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+K K NV PD FTY LN+ + S D+ G DD
Sbjct: 266 FAELKDKSNVAPDAFTY----------LNLLK--------SRDALGMDD----------- 296
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L + ++ +K T +W LI LY +G K ++++W+ + + M
Sbjct: 297 -----LEDTIEEFFLDVDKIPTGFEWRN---LIRLYGAMGKKKDVERLWREQKRVAEYMP 348
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ + S+ M G +K+ EI Q ++ C +L + GL A
Sbjct: 349 ESYFLAAIESFGMNGEMKQFEEICKQL-EAQNQKLSERQCFTMLKVYCMNGLMNDA 403
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 3/190 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 85
YT+L+ YA +A +F+++++ + YN ++ +Y +G K+A +V+ +
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSM 282
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD++TYN ISSC ++ + +EM +G S D V Y L+++Y S
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA-AGFSPDKVTYNALLDVY-GKSR 340
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L E E S +TY+ LI YA G D+ ++ + K Y
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400
Query: 206 CILSSYLMLG 215
+LS + G
Sbjct: 401 TLLSGFEKTG 410
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL +Y ++ +A E+ + ++ S + + + YN +++ Y G +++ + ++
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K + PD+FTY +S T D K +EM +G + + L+ ++ +
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV-AGCQPNICTFNALIKMHGNRGN 446
Query: 146 LVNA----ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
V E + E I +T++ L+ ++ G ++ ++K ++
Sbjct: 447 FVEMMKVFEEIKICECVPDI-----VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 501
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
+ ++S+Y G + I + + + D+S N +L A + GL E++ +
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTP-DLSTYNAVLAALARGGLWEQSEKVLA 560
Query: 262 LLLQKNCAP 270
+ C P
Sbjct: 561 EMKDGRCKP 569
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 2/168 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T A++ +Y + K E+ +K S + + YN +M +Y EK ++ EI
Sbjct: 643 TLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREI 702
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PDI ++N I + + + + EM D G + D + Y + Y + S
Sbjct: 703 IAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK-DFGLAPDVITYNTFIASYASDSM 761
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+ A + Q TY+ LI + L +D+ +LR
Sbjct: 762 FIEAIDVVKYMIKNGCKPNQN-TYNSLIDWFCKLNRRDEASSFISNLR 808
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ E+A E+FE +K + S + + YN ++ +Y + + V++E+
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P I TYN IS+ A +D+ + +M G D Y L++ + +
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKKGIKPDVFTYTTLLSGF-EKTG 410
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ E + Q T++ LI ++ GN ++ ++++ +++ + +
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L+ + G EV + + K++ + N L+ A+S G ++A + +L
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISAYSRCGFFDQAMAIYRRMLD 529
Query: 266 KNCAP 270
P
Sbjct: 530 AGVTP 534
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LLH YA K E+ L E + + A++ ++ +Y + + E+
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLEL 632
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PDI T N +S + + + L+ + DSG + Y +L+ +Y H
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK-DSGFTPSLTTYNSLMYMYSRTEH 691
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+E L E + I+++ +I Y G + +I+ ++
Sbjct: 692 FEKSE-DILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK 738
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 105/246 (42%), Gaps = 5/246 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A+L A E++E++ +K N L Y ++ Y + +VE+++ + EEI
Sbjct: 538 TYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEI 597
Query: 86 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ P + L + + L + + FL+ + G S D +V+IY
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR--EQGFSPDITTLNAMVSIY-GRR 654
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+V+ + L + S TY+ L+ +Y+ + +K + I + + K ++
Sbjct: 655 RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISF 714
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ +Y G +KE I + K + D+ N + +++ + +A + ++
Sbjct: 715 NTVIFAYCRNGRMKEASRIFAEMKDFGLAP-DVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 265 QKNCAP 270
+ C P
Sbjct: 774 KNGCKP 779
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 3/190 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 85
YT+L+ YA +A +F+++++ + YN ++ +Y +G K+A +V+ +
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSM 282
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD++TYN ISSC ++ + +EM +G S D V Y L+++Y S
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA-AGFSPDKVTYNALLDVY-GKSR 340
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L E E S +TY+ LI YA G D+ ++ + K Y
Sbjct: 341 RPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYT 400
Query: 206 CILSSYLMLG 215
+LS + G
Sbjct: 401 TLLSGFEKTG 410
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 109/249 (43%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL +Y ++ +A E+ + ++ S + + + YN +++ Y G +++ + ++
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K + PD+FTY +S T D K +EM +G + + L+ ++ +
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV-AGCQPNICTFNALIKMHGNRGN 446
Query: 146 LVNA----ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
V E + E I +T++ L+ ++ G ++ ++K ++
Sbjct: 447 FVEMMKVFEEIKICECVPDI-----VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 501
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
+ ++S+Y G + I + + + D+S N +L A + GL E++ +
Sbjct: 502 DTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTP-DLSTYNAVLAALARGGLWEQSEKVLA 560
Query: 262 LLLQKNCAP 270
+ C P
Sbjct: 561 EMKDGRCKP 569
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T A++ +Y + K E+ +K S + + YN +M +Y EK ++ EI
Sbjct: 643 TLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREI 702
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PDI ++N I + + + + EM D G + D + Y + Y + S
Sbjct: 703 IAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK-DFGLAPDVITYNTFIASYASDSM 761
Query: 146 LVNAESST--LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+ A +++ E Q TY+ LI + L +D+ + +LR
Sbjct: 762 FIEAIDVVKYMIKNECKPNQN---TYNSLIDWFCKLNRRDEANSFISNLR 808
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ E+A E+FE +K + S + + YN ++ +Y + + V++E+
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P I TYN IS+ A +D+ + +M G D Y L++ + +
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKKGIKPDVFTYTTLLSGF-EKTG 410
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ E + Q T++ LI ++ GN ++ ++++ +++ + +
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L+ + G EV + + K++ + N L+ A+S G ++A + +L
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISAYSRCGFFDQAMAIYRRMLD 529
Query: 266 KNCAP 270
P
Sbjct: 530 AGVTP 534
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+++Y+ + EK+E++ + + + + +N ++ Y G++++ + + E+
Sbjct: 678 TYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEM 737
Query: 86 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSCDSGGSD-----DWVKYVNL- 136
K + PD+ TYN +I+S A+ + V K++ + C + DW +N
Sbjct: 738 KDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRR 797
Query: 137 --VNIYITASHLVNAESSTLVEAEKSITQR 164
N +I S+L N + S + E+ + +R
Sbjct: 798 DEANSFI--SNLRNLDPSVTKDEERRLLER 825
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LLH YA K E+ L E + + A++ ++ +Y + + E+
Sbjct: 573 TYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLEL 632
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PDI T N +S + + + L+ + DSG + Y +L+ +Y H
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIK-DSGFTPSLTTYNSLMYMYSRTEH 691
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+E L E + I+++ +I Y G + +I+ ++
Sbjct: 692 FEKSE-DILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMK 738
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 105/246 (42%), Gaps = 5/246 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A+L A E++E++ +K N L Y ++ Y + +VE+++ + EEI
Sbjct: 538 TYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEI 597
Query: 86 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ P + L + + L + + FL+ + G S D +V+IY
Sbjct: 598 YSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELR--EQGFSPDITTLNAMVSIY-GRR 654
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+V+ + L + S TY+ L+ +Y+ + +K + I + + K ++
Sbjct: 655 RMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISF 714
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ +Y G +KE I + K + D+ N + +++ + +A + ++
Sbjct: 715 NTVIFAYCRNGRMKEASRIFAEMKDFGLAP-DVITYNTFIASYASDSMFIEAIDVVKYMI 773
Query: 265 QKNCAP 270
+ C P
Sbjct: 774 KNECKP 779
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ALL+ Y A +L + ++ ++S N MY ++ + +G+V K +++ +
Sbjct: 406 TYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCM 465
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ TY+ I+ I + K+ L M SG + V Y LV + A H
Sbjct: 466 LADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ-KSGVLPNNVLYTTLVFYFCKAGH 524
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A V+ +S + ++ L+ + G + +Q + + K ++
Sbjct: 525 AKEA-LKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFN 583
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
CI+ SY G++ E + D + DI LL G +A EF + LL+
Sbjct: 584 CIIDSYCQRGNVLEAFSVYDNMVRHGWPP-DICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642
Query: 266 KNCA 269
K CA
Sbjct: 643 KACA 646
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ K + +A L +R+++ NL+ + YN ++ + G++ + ++
Sbjct: 301 TYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQM 360
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+++ P + TY I D+ ++ L EM +G + Y L+N Y S
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI-TGVRPSELTYSALLNGYCKHSK 419
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A +SI+ + + Y LI + LG K QI K + Y
Sbjct: 420 LGPALDLIKYLRSRSISINRTM-YTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYS 478
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSAT 232
+++ +G + E EI+ + ++S
Sbjct: 479 ALINGMCKMGMIHETKEILSRMQKSGV 505
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 96/229 (41%), Gaps = 4/229 (1%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
KAE + +++K L NA+ YN ++ Y+ G+ + +++++++ + D++TYN+ I
Sbjct: 248 KAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMI 306
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+ L M + + D Y L++ + +N + +
Sbjct: 307 DKLCKLKRSARAYLLLKRMR-EVNLTPDECSYNTLIHGFFGEGK-INLAIYIFNQMLRQS 364
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
+ TY LI Y G D+ ++ +++T + + Y +L+ Y L
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPAL 424
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++I ++ +S + + + L+ F +G KA + +L P
Sbjct: 425 DLI-KYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDP 472
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 76
P S YT +LH + A E+A +LF +++ + + YN ++ +Y +G+
Sbjct: 83 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 142
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
++ ++EE++ V PD FT + I++C +DQ F +++ G V Y L
Sbjct: 143 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA-RGHVPCVVTYNAL 201
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
+ ++ A + A L E E S Q +TY+ L YA G ++ + ++
Sbjct: 202 LQVFGKAGNYTEA-LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKG 260
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ Y ++++Y +G + E + D+ K++
Sbjct: 261 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 295
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL ++ A +A + + ++ S +A+ YNE+ Y G E+ A ++ +
Sbjct: 197 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 256
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 142
K ++P+ FTYN +++ A +D+ D M + +V VN N+ +
Sbjct: 257 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-----KNGYVPNVNTYNLIFGMLG 311
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
A L E +S +T++ ++ + G +D + ++ ++ +++
Sbjct: 312 KKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRD 371
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++S+Y G ++ D+ S + ++ N LL S G A
Sbjct: 372 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPC-LTTYNALLNVLSRQGDWSTAQSIVSK 430
Query: 263 LLQKNCAPTNAS 274
+L+ P + S
Sbjct: 431 MLKNGFKPNDQS 442
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +YA KA E+F+ +KQS LS + + YN +M +Y + + +++++K
Sbjct: 513 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 572
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 573 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 627
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
E E+ F+ VK + +++N M+ +Y G K + + IK+ + PD+ TYN
Sbjct: 492 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 551
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ A + + +K L ++ S D V Y ++N + L+ L E
Sbjct: 552 MDMYAKSNESWEAEKILKQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIAD 609
Query: 161 ITQRQWITYDFLIILYAGL 179
+TY L+ YA L
Sbjct: 610 GMAPCVVTYHTLVGGYASL 628
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 52/95 (54%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ +YA + + +AE++ +++K S + + + YN ++ + G +++ ++ E+
Sbjct: 547 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 606
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ P + TY+ + A+ ++ ++ ++ M
Sbjct: 607 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 641
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 76
P S YT +LH + A E+A +LF +++ + + YN ++ +Y +G+
Sbjct: 174 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 233
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
++ ++EE++ V PD FT + I++C +DQ F +++ G V Y L
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA-RGHVPCVVTYNAL 292
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
+ ++ A + A L E E S Q +TY+ L YA G ++ + ++
Sbjct: 293 LQVFGKAGNYTEA-LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKG 351
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ Y ++++Y +G + E + D+ K++
Sbjct: 352 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL ++ A +A + + ++ S +A+ YNE+ Y G E+ A ++ +
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 142
K ++P+ FTYN +++ A +D+ D M + +V VN N+ +
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-----KNGYVPNVNTYNLIFGMLG 402
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
A L E +S +T++ ++ + G +D + ++ ++ +++
Sbjct: 403 KKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRD 462
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++S+Y G ++ D+ S + ++ N LL S G A
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPC-LTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 263 LLQKNCAPTNAS 274
+L+ P + S
Sbjct: 522 MLKNGFKPNDQS 533
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +YA KA E+F+ +KQS LS + + YN +M +Y + + +++++K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 718
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
E E+ F+ VK + +++N M+ +Y G K + + IK+ + PD+ TYN
Sbjct: 583 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 642
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ A + + +K L ++ S D V Y ++N + L+ L E
Sbjct: 643 MDMYAKSNESWEAEKILKQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIAD 700
Query: 161 ITQRQWITYDFLIILYAGL 179
+TY L+ YA L
Sbjct: 701 GMAPCVVTYHTLVGGYASL 719
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 52/95 (54%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ +YA + + +AE++ +++K S + + + YN ++ + G +++ ++ E+
Sbjct: 638 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 697
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ P + TY+ + A+ ++ ++ ++ M
Sbjct: 698 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 7/194 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ + + A+ + A+++FE +++ + + N + YN M++ G VE+ EE+
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 304
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD FTY ++ + + K LDEMSC SG + V Y LV+ ++
Sbjct: 305 VDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC-SGLKPNIVVYGTLVDGFMKEGK 363
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A L E + Q I YD LI +G + ++ K + + + Y
Sbjct: 364 TAEA-FDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY- 421
Query: 206 CILSSYLMLGHLKE 219
+ LM GH ++
Sbjct: 422 ----NPLMQGHFQQ 431
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A E E++ ++N+ + YN ++ +VG++E+ +++++ +VPD FTY+ I
Sbjct: 507 ACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIH 566
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
T N+++ + L +M +SG + Y +L+ Y ++
Sbjct: 567 GYCKTGNLEKADQLLRQM-LNSGLKPNADTYTDLLEGYFKSN 607
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+H Y EKA++L ++ S L NA Y +++ Y EKV+ +++ +
Sbjct: 560 TYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
PD Y + I + + + N++ L E+ +G D Y +L++ +
Sbjct: 620 LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE-KNGLVPDLHIYSSLISGLCKIAD 678
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L E K + + Y+ LI + G+ + ++ S+ + K + +
Sbjct: 679 MEKA-VGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI-LAKGLVPN---- 732
Query: 206 CILSSYLMLGHLKEVGEIIDQW 227
C+ + L+ G+ K G+I D +
Sbjct: 733 CVTYTALIDGNCKN-GDITDAF 753
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + + A EL ++ S + N Y M+ G+ ++ ++EE+
Sbjct: 420 TYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEM 479
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+ F Y I + NI + L++M+ + D Y +L+ T
Sbjct: 480 ISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT-KANVHPDLFCYNSLIKGLSTVGR 538
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ AE ++ + ++ TY LI Y GN +K DQ+ + + + K + Y
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEF-TYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYT 597
Query: 206 CILSSYLMLGHLKEVGEII 224
+L Y ++V I+
Sbjct: 598 DLLEGYFKSNDYEKVSSIL 616
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 40 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 99
+++A L E + L NA MY ++ + G + +E++ + NV PD+F YN
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528
Query: 100 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
I + +++ +++ ++ G D Y L++ Y +L A+ L +
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQ-KRGLVPDEFTYSGLIHGYCKTGNLEKAD-QLLRQMLN 586
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
S + TY L+ Y + +K+ I +S+ + K + Y
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIY 631
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/94 (20%), Positives = 42/94 (44%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y AL+ + + +A +F+ + L N + Y ++ G + + +E+
Sbjct: 701 YNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEML 760
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ + PD F YN+ + C+ +++Q +EM
Sbjct: 761 DRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 794
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 2/245 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ LL Y A E++ EL + V L +ALMY ++M ++ + ++EE+
Sbjct: 84 TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEM 143
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R P + T+N IS C N++ L M+ SG D V Y L++ A
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA-ASGVKADVVTYNTLMDGLCKAGR 202
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L AE L + S + Y + G Q+ + +R + Y
Sbjct: 203 LQEAE-QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYN 261
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
IL G + E+++Q S ++ + ++ +G T++A + +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 266 KNCAP 270
C P
Sbjct: 322 AGCRP 326
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ A ++AE+L ER+K S + + + Y+ + G+V V+E++
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P++ TYN + + ID + +++M+ G + V Y +V+
Sbjct: 249 RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 146 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTS 201
E+ +++EA ++ + +TY L+ GL KI++ +++R M K +
Sbjct: 309 --TQEARSVMEAMARAGCRPDVVTYSSLV---NGLCKAGKIEEAVEAVREMAMEGCKPNA 363
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT----SDFDISACNRLLGAFSDVGLTEKAN 257
Y ++ G L E ++++ +S N L+G G + A
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDAL 423
Query: 258 EFHMLLLQKNCAPTNAS 274
+F + + C P S
Sbjct: 424 KFFQRMRSQGCDPDGVS 440
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 49/267 (18%)
Query: 12 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
R F +P ++ YTA+L ++A AE+ +K NL YN M+ +Y
Sbjct: 59 RCFWEMPAELRSEAAYTAMLQVFARWHAIPAAEDTMSEMKSLNLITRVEPYNIMLDMYKR 118
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID----QVKKFLDEMSCDSGGS 127
+ +KV + +E+ V PD TY + + + D +V+KFLDE
Sbjct: 119 KNEDDKVRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGFDGIEAEVRKFLDE-------- 170
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKID 186
+T RQ + Y+ ++ +Y L + I+
Sbjct: 171 --------------------------------QLTSRQPLFIYECMLRIYTLLRDLTAIE 198
Query: 187 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 246
+ L T +K +S +Y C+L +Y LG ++ + ++ T +I + ++
Sbjct: 199 NLRSILLKTFKKFSSSSYNCLLDAYRQLGEVERAERLFNEIGNKFT--LNIQSYRAMIAV 256
Query: 247 FSDVGLTEKANEFHMLLLQKN--CAPT 271
++ G EKANE + L + C P
Sbjct: 257 YASNGRMEKANELYKQLFRAGFECHPA 283
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-E 76
P S YT +LH + A E+A +LF +++ + + YN ++ +Y +G+
Sbjct: 174 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 233
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
++ ++EE++ V PD FT + I++C +DQ F +++ G V Y L
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA-RGHVPCVVTYNAL 292
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
+ ++ A + A L E E S Q +TY+ L YA G ++ + ++
Sbjct: 293 LQVFGKAGNYTEA-LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKG 351
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ Y ++++Y +G + E + D+ K++
Sbjct: 352 LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL ++ A +A + + ++ S +A+ YNE+ Y G E+ A ++ +
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI---YIT 142
K ++P+ FTYN +++ A +D+ D M + +V VN N+ +
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMK-----KNGYVPNVNTYNLIFGMLG 402
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
A L E +S +T++ ++ + G +D + ++ ++ +++
Sbjct: 403 KKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRD 462
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++S+Y G ++ D+ S + ++ N LL S G A
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPC-LTTYNALLNVLSRQGDWSTAQSIVSK 521
Query: 263 LLQKNCAPTNAS 274
+L+ P + S
Sbjct: 522 MLKNGFKPNDQS 533
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +YA KA E+F+ +KQS LS + + YN +M +Y + + +++++K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
V PD+ +YN I+ I + ++ L EM D G + V Y LV Y +
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIAD-GMAPCVVTYHTLVGGYAS 718
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
E E+ F+ VK + +++N M+ +Y G K + + IK+ + PD+ TYN
Sbjct: 583 EGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSL 642
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ A + + +K L ++ S D V Y ++N + L+ L E
Sbjct: 643 MDMYAKSNESWEAEKILKQLK-SSQVKPDVVSYNTVINGFCKQG-LIKEAQRILSEMIAD 700
Query: 161 ITQRQWITYDFLIILYAGL 179
+TY L+ YA L
Sbjct: 701 GMAPCVVTYHTLVGGYASL 719
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 52/95 (54%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ +YA + + +AE++ +++K S + + + YN ++ + G +++ ++ E+
Sbjct: 638 TYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 697
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ P + TY+ + A+ ++ ++ ++ M
Sbjct: 698 IADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYM 732
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y +LL ++A +LF + + L+ +A Y+ + Y V + V++ +
Sbjct: 229 AYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRM 288
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R N+VP++FTYN + + +D+ + LDEM + G S D Y N + +
Sbjct: 289 RRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM-IERGVSPDLWSY-NAIQAFHCDHC 346
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN + EK TY+ ++ + +G D++ +W M R +
Sbjct: 347 EVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGG-------MEERGFY 399
Query: 206 CILSSYLMLGH 216
S+Y ++ H
Sbjct: 400 PAASTYAVMVH 410
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
LL++ K ++A+E F++V + NA Y+ +M + VG + + EE++ +
Sbjct: 164 LLYVLCKRKHVKQAQEFFDKVNVEVMP-NAKTYSILMRGWGDVGDSSEARKLFEEMRERG 222
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
D+ YN + + N+D+ K EM +G + D Y + Y + + +A
Sbjct: 223 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMG-SNGLAPDACSYSIFIRAYCEVNDIHSA 281
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 3 KVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKWTE-KAEELFERVKQSNLSFNAL 60
KV G+ E +FE +P + K Y LL YA + T+ KAE +FE++++ L
Sbjct: 164 KVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLS 223
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
+N +++LY G++ V +++ ++K KN+ PDI T N + + A L ID ++K
Sbjct: 224 PFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSMEK 278
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 4/249 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y + A AK EE+ E K+ ++S +++LY G + V +E+
Sbjct: 70 YEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVR-LISLYGKSGMFDHAFKVFDEM 128
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + ++N + +C + D++ F E+ + G D V Y +VN +
Sbjct: 129 PDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGS 188
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A S L E EK + IT++ L+ + G+ ++IW ++ R+Y
Sbjct: 189 LDSA-LSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYN 247
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
L + + E E+ID+ K S D+ N L+ F + G E+A ++ + +
Sbjct: 248 AKLRGVISENRMSEAVELIDEMKTSGIKP-DVFTLNSLMKGFCNAGNLEEAKRWYSEIAR 306
Query: 266 KNCAPTNAS 274
P A+
Sbjct: 307 NELPPVRAT 315
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 51/96 (53%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL+ + E++++ +K++N++ N YN + +S ++ + +++E+
Sbjct: 210 TFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEM 269
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
K + PD+FT N + N+++ K++ E++
Sbjct: 270 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIA 305
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++H A+ +KAE ++ + N YN ++ Y S GQ ++ V +E+
Sbjct: 222 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 281
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R +++PD+ T ++ + S I + + D M+ G + D Y ++N Y T
Sbjct: 282 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYNIMLNGYATKGC 340
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I + T++ I YA G DK I+ +R K Y
Sbjct: 341 LVDMTDLFDLMLGDGIAP-DFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 399
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
++++ +G + + E +Q + D A N L+ F G+ K
Sbjct: 400 TVIAALCRIGKMDDAMEKFNQMIDQGVAP-DKYAYNCLIQGFCTHGILLK 448
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 107/293 (36%), Gaps = 39/293 (13%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TS TY L+ A E A F ++ ++ L +A++ + ++ + +
Sbjct: 68 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 127
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------- 120
E + +++ VPD+F+YN+ + S Q L M
Sbjct: 128 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVA 187
Query: 121 ----------------SCD-------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
+CD G D V Y ++V+ A + AE+
Sbjct: 188 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 247
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
K + W TY+ LI Y+ G + +++K +R ++ S G +
Sbjct: 248 NKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 306
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
KE ++ D + D+ + N +L ++ G + L+L AP
Sbjct: 307 KEARDVFDTMAMKGQNP-DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 358
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 95/233 (40%), Gaps = 5/233 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y LL + +A+ L + + S + + YN ++ + G V K + +
Sbjct: 150 SYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 209
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD+ TYN + + +D+ + FL +M ++W Y NL+ Y +
Sbjct: 210 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT-YNNLIYGYSST 268
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
A E + +T L+ G + ++ ++ M Q +
Sbjct: 269 GQWKEA-VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 327
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +L+ Y G L ++ ++ D + D N + A+++ G+ +KA
Sbjct: 328 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAP-DFYTFNVQIKAYANCGMLDKA 379
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 7/193 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L + A+ + A+++FE +++ + + N + YN M++ G VE+ EE+
Sbjct: 247 TYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 306
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD FTY ++ + + K LDEMSC SG + V Y LV+ ++
Sbjct: 307 VDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSC-SGLKPNVVVYATLVDGFMKEGK 365
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A L E + Q I YD LI +G + ++ + + + Y
Sbjct: 366 AAEA-FDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY- 423
Query: 206 CILSSYLMLGHLK 218
LM GH +
Sbjct: 424 ----HPLMQGHFQ 432
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+H Y + EKA++L +++ S L NA Y +++ Y EKV+ +++ +
Sbjct: 562 TYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
PD Y + I + + + N++ L E+ +G D Y +L++ +
Sbjct: 622 LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE-KNGLVPDLHIYSSLISGLCKMAD 680
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L E K + + Y+ LI + G+ + ++ S+ + K + +
Sbjct: 681 MEKA-VGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI-LAKGLLPN---- 734
Query: 206 CILSSYLMLGHLKEVGEIIDQW 227
C+ + L+ G+ K G+I D +
Sbjct: 735 CVTYTALIDGNCKN-GDITDAF 755
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ +++A L E + L NA MY ++ + G + +E +
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ NV+PD+F YN I + I++ +++ ++ G D Y L++ Y +
Sbjct: 517 TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ-KRGLVPDEFTYSGLIHGYCKTRN 575
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A+ L + S + TY L+ Y + +K+ I +S+ + K + Y
Sbjct: 576 LEKAD-QLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 7 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ R F+ +PL A TYTAL+H Y EK LFE +++ + N YN
Sbjct: 54 VAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNC 113
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ + G+ E+ + +E+ + +V ++ +YN I+ + K LD M +
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE- 172
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
G + + LV+ Y A + NA + + + Q +TY+ LI + + +
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNA-LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 244
++ ++ + T Y ++ S+ H+ + EI+ +++ + D L+
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL-EVDAHTYGVLV 290
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAPTN 272
A G + A + + +K P+N
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSN 318
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 44/299 (14%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 74 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 224 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 282
Query: 127 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLVEAEKSITQ 163
S D V Y ++V+ + +A +L A E+ T V A
Sbjct: 283 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 342
Query: 164 --RQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 212
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 343 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 401
Query: 213 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 402 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 459
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 7 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ R F+ +PL A TYTAL+H Y EK LFE +++ + N YN
Sbjct: 54 VAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNC 113
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ + G+ E+ + +E+ + +V ++ +YN I+ + K LD M +
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE- 172
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
G + + LV+ Y A + NA + + + Q +TY+ LI + + +
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNA-LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 244
++ ++ + T Y ++ S+ H+ + EI+ +++ + D L+
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL-EVDAHTYGVLV 290
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAPTN 272
A G + A + + +K P+N
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSN 318
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 7 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ R F+ +PL A TYTAL+H Y EK LFE +++ + N YN
Sbjct: 54 VAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNC 113
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ + G+ E+ + +E+ + +V ++ +YN I+ + K LD M +
Sbjct: 114 LIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE- 172
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
G + + LV+ Y A + NA + + + Q +TY+ LI + + +
Sbjct: 173 GTRPSIITFNLLVDGYGKAGKMSNA-LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 244
++ ++ + T Y ++ S+ H+ + EI+ +++ + D L+
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL-EVDAHTYGVLV 290
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAPTN 272
A G + A + + +K P+N
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSN 318
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++++H A+ +KAE ++ + + YN ++ Y S GQ ++ V +E+
Sbjct: 258 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 317
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R++++PD+ N + S I + + D M+ G + D Y ++N Y T
Sbjct: 318 RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQNPDVFSYTIMLNGYATKGC 376
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I T++ LI YA G DK I+ +R K Y+
Sbjct: 377 LVDMTDLFDLMLGDGIAP-VICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYM 435
Query: 206 CILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++++ +G + + E +Q Q D C L+ F G KA E
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC--LIQGFCTHGSLLKAKEL 488
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 104/238 (43%), Gaps = 15/238 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y LL + +A++L + + S + + YN ++ + G V K + +
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD+ TY+ + + +D+ + FL +M D+W Y NL+ Y +
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSST 304
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKIDQ---IWKSLRMTKQK 198
A V K + +RQ I D + + L L KI + ++ ++ M Q
Sbjct: 305 GQWKEA-----VRVFKEM-RRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+Y +L+ Y G L ++ ++ D + I N L+ A+++ G+ +KA
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPV-ICTFNVLIKAYANCGMLDKA 415
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 101/250 (40%), Gaps = 12/250 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TS TY L+ A E A F ++ ++ L +A++ + ++ + +
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163
Query: 75 V-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG---SDDW 130
E + +++ VPD+F+YN+ + S Q L M+ GG S D
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA--EGGTVCSPDV 221
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V Y +++ + VN E + +TY ++ DK + +
Sbjct: 222 VAYNTVIDGFFKEGD-VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280
Query: 191 SLRMTKQKMTSRN--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 248
+M + + N Y ++ Y G KE + + ++ + D+ A N L+G+
Sbjct: 281 --QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP-DVVALNTLMGSLC 337
Query: 249 DVGLTEKANE 258
G ++A +
Sbjct: 338 KYGKIKEARD 347
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/194 (15%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ YA +KA +F ++ + + + Y ++ +G+++ ++
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ VVPD + Y+ I ++ + K+ + E+ ++G D V + +++N
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM-NNGMRLDIVFFGSIINNLCKLGR 516
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+++A++ + + + Y+ L+ Y +G +K +++ ++ + Y
Sbjct: 517 VMDAQNIFDLTVNVGL-HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575
Query: 206 CILSSYLMLGHLKE 219
+++ Y +G + E
Sbjct: 576 TLVNGYCKIGRIDE 589
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 6/257 (2%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
KV GI E F +P + Y L+ + A ++++ +L + +
Sbjct: 128 AKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPISPYV 187
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN ++ L+ S G+ + ++ ++ ++K V P TYN+ + A NID V + ++M
Sbjct: 188 YNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVFNDMK 247
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLG 180
++ + Y L + A + S T VEA E S+T W T + L+ILY G
Sbjct: 248 RAKVEPNE-ITYGILAIAHAVAR--LYTVSHTYVEAIENSMTGTNWSTLEILLILYGYHG 304
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
++ W L + +++I + ++ +G + + EI +++ +
Sbjct: 305 KAKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKLT-EQF 362
Query: 241 NRLLGAFSDVGLTEKAN 257
N +L + GL +KA+
Sbjct: 363 NSILSVYCRHGLVDKAS 379
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P +A Y A L A+ TEKA E+++R+K+ N + M+ +Y Q
Sbjct: 42 GIPPNATV---YNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 98
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 99 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 157
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
L+ Y A L S + + +Y+ L+ Y G + + +++ L+
Sbjct: 158 LMEAYSRAG-LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 216
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
T ++++ +L+++ G+ E++ Q +S + D A N +L A++ G
Sbjct: 217 GMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP-DTFALNAMLNAYARAG 271
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ET+T ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 82 TETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFE 141
Query: 84 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+++ PD++ YN + S ++ + M C+ D Y LV+ Y
Sbjct: 142 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP----DRASYNILVDAY 197
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A +AE + E ++ ++ L+ +A GN + +++ L K +T
Sbjct: 198 GRAGLHEDAE-AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLH--KSGLT 254
Query: 201 SRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ +L++Y G L ++ + ++ D D+ N + A+ G
Sbjct: 255 PDTFALNAMLNAYARAGRLDDMERLFAAMERR--GDADVGTYNVAVNAYGRAG 305
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 82/214 (38%), Gaps = 40/214 (18%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
Y ++ Y + G + + V+ E++ + P+ YN ++ ++ + M
Sbjct: 15 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK 74
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLG 180
+ ++ + ++N+Y A ++ S + KSI + I TY L+ +A G
Sbjct: 75 RERCRANTET-FTLMINVYGKAKQPMS--SMKVFNEMKSIGCKPNICTYTALVNAFAREG 131
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
+K +++++ + Q A + D+ A
Sbjct: 132 LCEKAEEVFEEM------------------------------------QQAGHEPDVYAY 155
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N L+ A+S GL + A+E L+ C P AS
Sbjct: 156 NALMEAYSRAGLPQGASEIFSLMQHMGCEPDRAS 189
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
L GA EKA + + + Y++++ L + +V+ L+ EE+K +
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
VVPD+FTY + I S + Q +K+ DEM D G + + V Y L++ Y+ A + +A
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSA 569
Query: 150 -ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
E ++ +E I +TY LI + G +K QI+ +R
Sbjct: 570 NELFEMMLSEGCIP--NVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 100/266 (37%), Gaps = 29/266 (10%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+H Y A+ A ELFE + N + Y ++ + GQ+EK + +
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Query: 86 KRKNVVPD----------------IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+ +PD IFTY + + + + LD MS + G +
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE-GCEPN 670
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ Y L++ + L A+ +E+ + TY LI L ++D
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY-TYSSLI---DRLFKDKRLDLAL 726
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLL 244
K L + + N I M+ L +VG+ + ++ + ++ ++
Sbjct: 727 KVLSRMLENSCAPNVIIYTE---MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAP 270
F G +K E + K CAP
Sbjct: 784 DGFGKAGKVDKCLELMRQMGAKGCAP 809
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ T++A L +++ N + Y M+ + G+V+K ++ ++
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K P+ TY + I+ C A +D + LDEM
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 44 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
+ LF +K ++ YN ++ + G ++KV V+ E+ R+ + PD+F++N I++
Sbjct: 83 DRLFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAA 142
Query: 104 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 163
A + ++ + M +G D V Y L+ ++ + S + E + Q
Sbjct: 143 YAMSRKPERGLQVFSNMKA-AGVLPDIVTYTTLIQMF-SRSAMHKEAIEMFEEMVVNKCQ 200
Query: 164 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
+ Y L+ +Y G I+ L++ + Y ++S++L G L+E +
Sbjct: 201 PDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKH 260
Query: 224 IDQWKQSATSDFDISACNRLLGAFSDVGLT-EKANEFHMLLLQKNCAPTNAS 274
Q + D+ N ++ A++ G+ + AN H L Q C P AS
Sbjct: 261 FSQMEAYGCRA-DVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVC-PNRAS 310
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ +++ + ++A E+FE + + + +Y+ ++++Y G V L+ +
Sbjct: 170 TYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRL 229
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ + P+I TY IS+ +++ +K +M +D V+L+N I A
Sbjct: 230 QLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQMEAYGCRAD-----VHLLNTMIDA 282
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
L GA EKA + + + Y++++ L + +V+ L+ EE+K +
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
VVPD+FTY + I S + Q +K+ DEM D G + + V Y L++ Y+ A + +A
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSA 569
Query: 150 -ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
E ++ +E I +TY LI + G +K QI+ +R
Sbjct: 570 NELFEMMLSEGCIP--NVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 100/266 (37%), Gaps = 29/266 (10%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+H Y A+ A ELFE + N + Y ++ + GQ+EK + +
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Query: 86 KRKNVVPD----------------IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+ +PD IFTY + + + + LD MS + G +
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE-GCEPN 670
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ Y L++ + L A+ +E+ + TY LI L ++D
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY-TYSSLI---DRLFKDKRLDLAL 726
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLL 244
K L + + N I M+ L +VG+ + ++ + ++ ++
Sbjct: 727 KVLSRMLENSCAPNVIIYTE---MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAP 270
F G +K E + K CAP
Sbjct: 784 DGFGKAGKVDKCLELMRQMGAKGCAP 809
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ T++A L +++ N + Y M+ + G+V+K ++ ++
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K P+ TY + I+ C A +D + LDEM
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
L GA EKA + + + Y++++ L + +V+ L+ EE+K +
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
VVPD+FTY + I S + Q +K+ DEM D G + + V Y L++ Y+ A + +A
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSA 569
Query: 150 -ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
E ++ +E I +TY LI + G +K QI+ +R
Sbjct: 570 NELFEMMLSEGCIP--NVVTYTALIDGHCKSGQIEKACQIYARMR 612
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 100/266 (37%), Gaps = 29/266 (10%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+H Y A+ A ELFE + N + Y ++ + GQ+EK + +
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Query: 86 KRKNVVPD----------------IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+ +PD IFTY + + + + LD MS + G +
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE-GCEPN 670
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ Y L++ + L A+ +E+ + TY LI L ++D
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY-TYSSLI---DRLFKDKRLDLAL 726
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLL 244
K L + + N I M+ L +VG+ + ++ + ++ ++
Sbjct: 727 KVLSRMLENSCAPNVIIYTE---MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAP 270
F G +K E + K CAP
Sbjct: 784 DGFGKAGKVDKCLELMRQMGAKGCAP 809
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ T++A L +++ N + Y M+ + G+V+K ++ ++
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K P+ TY + I+ C A +D + LDEM
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y LL ++A+ +F + + +A Y+ + Y V+ V++++
Sbjct: 253 AYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKM 312
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R N++P++FTYN I ++++ + LDEM D W N + Y
Sbjct: 313 RRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWS--YNAIQAYHCDHC 370
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN + EK I TY+ ++ L +G DK+ ++W + M + +
Sbjct: 371 EVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVW-------ENMVDKKFY 423
Query: 206 CILSSYLMLGH 216
+S+Y ++ H
Sbjct: 424 PSVSTYSVMIH 434
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 5/263 (1%)
Query: 10 GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 67
G R+FE + + TY ++ Y K ++A +L + L N L YN ++
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 68 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 127
VG++E+ + V+ E+ RK PD TYN ++ N Q EM +G
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM-LRNGLP 340
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
D V Y +L+N A +L N + + +TY LI ++ G D+ +
Sbjct: 341 PDVVTYTSLINTMCKAGNL-NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYR 399
Query: 188 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 247
IW + + T Y +L+ + + G ++E ++ + S D+ + + ++ F
Sbjct: 400 IWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP-DVVSYSTIIAGF 458
Query: 248 SDVGLTEKANEFHMLLLQKNCAP 270
++A + + +++K +P
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSP 481
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 3/214 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AE+++ + S +S N YN ++ + + G +E EE++R +P++ TYN I
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
+ ID+ K L M + G + + Y ++N + S L E ++
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLE-GLEPNLLTYNMVINGLCRVGR-IEETSGVLAEMDRKGF 304
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
+TY+ L+ Y +GN + + + Y ++++ G+L E
Sbjct: 305 APDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME 364
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
DQ ++ + L+ FS G ++A
Sbjct: 365 FFDQMHVRGLRPNGVTYTS-LINGFSQKGFMDEA 397
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 7/233 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+ + A E FE ++++ N + YN ++ Y + ++++ ++ +
Sbjct: 205 SYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM 264
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P++ TYN+ I+ I++ L EM G + D V Y LVN Y
Sbjct: 265 GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD-RKGFAPDGVTYNTLVNGYCKVG- 322
Query: 146 LVNAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
N + ++ +E ++ +TY LI GN ++ + + + + +
Sbjct: 323 --NFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVT 380
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +++ + G + E I D+ +S I N LL G E+A
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPP-TIVTYNALLNGHCVSGRMEEA 432
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y +LL ++A +LF + + L+ +A Y+ + Y V + V++ +
Sbjct: 256 AYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRM 315
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R N+VP++FTYN + + +D+ + LDEM + G S D Y N + +
Sbjct: 316 RRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM-IERGVSPDLWSY-NAIQAFHCDHC 373
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN + EK TY+ ++ + +G D++ +W M R +
Sbjct: 374 EVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGG-------MEERGFY 426
Query: 206 CILSSYLMLGH 216
S+Y ++ H
Sbjct: 427 PAASTYAVMVH 437
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
LL++ K ++A+E F++V + NA Y+ +M + VG + + EE++ +
Sbjct: 191 LLYVLCKRKHVKQAQEFFDKVNVEVMP-NAKTYSILMRGWGDVGDSSEARKLFEEMRERG 249
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
D+ YN + + N+D+ K EM +G + D Y + Y + + +A
Sbjct: 250 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMG-SNGLAPDACSYSIFIRAYCEVNDIHSA 308
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 10/265 (3%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 64
I E+ F+ + L+ YT + + A + + +A ++F + S + NA+ +N
Sbjct: 271 ISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---S 121
+M +++ G+ EKV V ++K+ PD TYN I + N++ K L+ M
Sbjct: 331 LMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKK 390
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
C+ S N + YI VN + ++ + +TY+ L+ ++AG +
Sbjct: 391 CEVNAST-----FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKS 445
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
D + ++ K + + + Y +++ + +GH ++ + + +S
Sbjct: 446 TDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQK 266
+L G +K E ++QK
Sbjct: 506 MVLAQLRRAGQLKKHEELVEKMIQK 530
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 38 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 97
+ +A+ F+ +K + ++Y ++ + G++ + V +++K + P+++TY
Sbjct: 235 RRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTY 293
Query: 98 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-- 155
++ I + I + +M DSG + + + + NL+ +++ A E V
Sbjct: 294 SIVIDALCRCGQISRAHDVFADM-LDSGCAPNAITFNNLMRVHVKAGR---PEKVLQVYN 349
Query: 156 EAEKSITQRQWITYDFLI 173
+ +K + ITY+FLI
Sbjct: 350 QMKKLGCEPDTITYNFLI 367
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L++ Y A ++A LF +K++ L+ + L YN ++ Y +G +E+ +E+
Sbjct: 374 TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ TY + ++ N+ V++F DEM G D Y N I+A
Sbjct: 434 VEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEM-LSKGLQPDCFAY----NTRISAEL 488
Query: 146 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
++ + S E I++ +TY+ + GN +W + +
Sbjct: 489 ILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCI 548
Query: 203 NYICILSSYLMLGHLKEVGEIID 225
Y C++ ++ G L+E +I D
Sbjct: 549 TYTCLIHAHCERGRLREARDIFD 571
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 12 RYFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
R E P S+ TY +++ A EKA +L +R++ S + +A +N ++T Y
Sbjct: 255 REMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA-SAFTFNPLITGYF 313
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
+ G VEK + E++ + +VP + TYN I + N++ + EM G D
Sbjct: 314 ARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA-MGLLPDL 372
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
+ Y +L+N Y A +L A + +++ +TY+ L+ Y LG+ ++
Sbjct: 373 ITYNSLINGYCKAGNLKEA-LWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEA----- 426
Query: 191 SLRMTKQKMTSRNYICILSSYLML 214
R KQ+M + +S+Y +L
Sbjct: 427 --RRFKQEMVEQGCQPDVSTYTIL 448
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY ++H + E A F ++ L + + YN ++ Y G +++ +
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWL 394
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++KR + P + TYN+ + ++++ ++F EM + G D Y L+N
Sbjct: 395 FGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM-VEQGCQPDVSTYTILMN 450
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 99/236 (41%), Gaps = 7/236 (2%)
Query: 37 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK--NVVPDI 94
A+W + ++ + Q + + + YN ++ + G+V++ A ++ E++ + +P
Sbjct: 210 ARW-DDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSD 268
Query: 95 FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 154
TYN+ I+ A +++ + +D M S + L+ Y + A + L
Sbjct: 269 VTYNVVINGLARKGELEKAAQLVDRMRMSKKASA--FTFNPLITGYFARGSVEKAGALQL 326
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
E E +TY+ +I GN + + +R Y +++ Y
Sbjct: 327 -EMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKA 385
Query: 215 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
G+LKE + K++ + + N LL + +G E+A F ++++ C P
Sbjct: 386 GNLKEALWLFGDLKRAGLAP-SVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQP 440
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+LL+ Y + EKA E+F ++K+++ N + YN ++ Y S G +++ ++ E+
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITAS 144
++ + PD+ + + +++C I +++ L+ + S G D + V Y + + Y++
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILE--AARSRGIDLNTVAYNSGIKSYLSFG 377
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
A +S + +TY+ LI + LG + + ++ + +K T Y
Sbjct: 378 DYEKA-LELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVY 436
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSA 231
++ SY+ G L E K+S
Sbjct: 437 SSLIYSYIKQGKLSEAESTFSSMKKSG 463
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ LYA ++A LF +++ +A +YN ++ + GQ ++E
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LVTHNIVL 123
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQK 198
S L N + + I + +T D +I +G + +++ S+R + K
Sbjct: 124 SALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK 183
Query: 199 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y I+ SY + G ++ I D +I A N LLGA++ G+ +A
Sbjct: 184 CPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP-NIVAYNSLLGAYASRGMHREA 242
Query: 257 NEFHMLLLQKNCAP 270
L+ + P
Sbjct: 243 LAIFNLIKKNGLRP 256
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + I
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + PDI +Y +++ + ++ ++ ++M +S + V Y L++ Y +A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK-VSYNALIDAYGSAGM 308
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L E EK Q ++ L+ +I+ I ++ R + + Y
Sbjct: 309 LKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ SYL G ++ E+ ++S D N L+ S +G
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKP-DAVTYNILISGSSKLG 412
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 26 TYTALLHLY-AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TYT L+ Y AG W ++A +LF+ ++ + + +A++ + +M + G+ E+V ++E
Sbjct: 470 TYTTLIQAYNAGGGW-KRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEF 528
Query: 85 IKRKNVVPDIFTYNLWISSC 104
+K+K++ + +Y I+SC
Sbjct: 529 MKKKSIPLNQKSYFEIIASC 548
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKV 78
S T + Y A++ +YA K +EL + ++ + + +N ++ + G V +
Sbjct: 218 SGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNL 277
Query: 79 AL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
A+ ++ E++R + PDI TYN IS+C+ N+++ K ++M D W Y ++
Sbjct: 278 AIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT-YNAMI 336
Query: 138 NIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LR 193
++Y ++ E+ L + E +TY+ L+ +A GN DK+ +I + +
Sbjct: 337 SVYGRCG--MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 394
Query: 194 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 253
K +MT Y I+ Y G ++ K S S D L+ + +
Sbjct: 395 FGKDEMT---YNTIIHMYGKRGQHDLAFQLYSDMKLSGRSP-DAVTYTVLIDSLGKANMI 450
Query: 254 EKANEFHMLLLQKNCAPT 271
++A E +L PT
Sbjct: 451 KEAAEVMSEMLNARVKPT 468
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L LY G +K ++++ ++++ L + YN ++ +Y + E+ ++ E++
Sbjct: 925 WNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMR 984
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R + P + TY IS+ ++Q ++ + + D ++ ++ ++ + +
Sbjct: 985 RVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHI-MMKMFRNSGNH 1043
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE V E + + T L++ Y+G G ++ +++ +L++ +++ Y
Sbjct: 1044 SKAEKLLGVMKEAGV-EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSS 1102
Query: 207 ILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISAC 240
++ +YL G H + ++++ K D I C
Sbjct: 1103 VIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTC 1137
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ + AL+H YA + E+A +F + + S N +M + G+++++ +V++E
Sbjct: 783 KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 842
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + L + + A NI +VKK M +G Y ++ +
Sbjct: 843 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKA-AGYFPTMHLYRIMIGLLAKGK 901
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + E + + E E + + ++ ++ LY G+G+ K Q+++ ++ K Y
Sbjct: 902 RVRDVE-AMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTY 960
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ Y +E ++ + ++ + L+ AF + + E+A E LL
Sbjct: 961 NTLILMYCRDRRPEEGLSLMHEMRRVGLEP-KLDTYKSLISAFGKLQMVEQAEELFEGLL 1019
Query: 265 QKNC 268
K C
Sbjct: 1020 SKEC 1023
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN M+++Y G + + ++++ K +PD TYN + + A N+D+VK+ ++M
Sbjct: 332 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV 391
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
G D+ +TY+ +I +Y G
Sbjct: 392 KMGFGKDE-------------------------------------MTYNTIIHMYGKRGQ 414
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
D Q++ ++++ + + Y ++ S +KE E++ + +A + +
Sbjct: 415 HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEM-LNARVKPTLRTFS 473
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
L+ ++ G +A E +L+ P +
Sbjct: 474 ALICGYAKAGKRVEAEETFDCMLRSGIKPDH 504
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ + + E+AEELFE + + Y+ MM ++ + G K ++
Sbjct: 993 DTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGV 1052
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+K V P I T +L + S + + ++ +K LD + + G + Y ++++ Y+
Sbjct: 1053 MKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVE-GLPLSTLPYSSVIDAYL 1108
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G+ E+Y E +P S + Y LL A E++F ++K +L A
Sbjct: 220 IAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLIATEKIFNKMKDLDLPLTAF 279
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY + +K+A V+ ++++NV P +FTY + I S + +I +++ + M
Sbjct: 280 ACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYRILIDSKGQSNDIAGMEQVFETM 338
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
+ D ++ L+ + T+S L + L E E +++ + QW+ L+ LYA L
Sbjct: 339 KEEGFEPD--IQIQALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVCAT-LLRLYANL 395
Query: 180 GNKDKIDQIWK 190
G D++++IWK
Sbjct: 396 GKADEVERIWK 406
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
K+ I E FE + K S+ Y+ LL +YA K K +EL + + S + L
Sbjct: 426 KLNKIEEAEAVFEMVSKKWKLNSKNYSVLLKIYANNKMLTKGKELVKLMADSGVRIGPLT 485
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
++ ++ LY+ G+VEK ++ + ++N + +FT L I
Sbjct: 486 WDALVKLYIQAGEVEKADSILHKAIQQNQLQPMFTTYLAI 525
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 38/267 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + A A +KA+ E+++++ + + Y +++ ++ +GQ+ V +E+
Sbjct: 542 TYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY----- 140
N+ PD+ Y + I++ A T N+ Q +++ M ++G + V Y +L+ +Y
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK-EAGIPGNSVIYNSLIKLYTKVGY 660
Query: 141 ----------------------ITASHLVN---AESSTLVEAE---KSITQRQ---WITY 169
+ SH +N +E S + +AE +S+ QR+ T+
Sbjct: 661 LDEAEAIYRKLLRSCNETQYPDVYTSHCMNNLCSERSMVRKAEAIFESMKQRREANEFTF 720
Query: 170 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 229
++ +Y G ++ QI K +R + +Y +L Y + G KE E +
Sbjct: 721 AMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVS 780
Query: 230 SATSDFDISACNRLLGAFSDVGLTEKA 256
S D S L +G+++KA
Sbjct: 781 SGIQP-DDSTFKSLGTILIKLGMSKKA 806
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S TY ++ Y + ++A E F+R+ + + + +N M+ +Y + GQ +V ++
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLM 356
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ +K + PD TYN+ IS +I++ + EM +G D V Y L+ + +
Sbjct: 357 KTMKF-HCAPDTRTYNILISLHTKNNDIERAGTYFKEMK-GAGLKPDPVSYRTLLYAF-S 413
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK--QKMT 200
+V + E + + + T L +Y + +++ W R M+
Sbjct: 414 IRRMVKEAEELIAEMDDNDVEIDEYTQSALTRMYI---EAEMLEKSWSWFRRVHVAGNMS 470
Query: 201 SRNYICILSSYLMLGHLKEVGEI 223
S Y + +Y G+L E +
Sbjct: 471 SEGYSANIDAYGERGYLSEAERV 493
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 30 LLHLYAGAKWTEKAEELF------ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+L +Y A+ +KAEE F E S++ ++ YN M+ Y GQ+++ + +
Sbjct: 263 VLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFK 322
Query: 84 EIKRKNVVPDIFTYNLWI 101
+ + +VP T+N I
Sbjct: 323 RMLEEGIVPTTVTFNTMI 340
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 107/242 (44%), Gaps = 20/242 (8%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---VVE 83
Y L+ Y E+AE L +++ + N YN ++T Y+ + + ++E
Sbjct: 212 YNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIE 271
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ + PD+ T+ + + + +Q ++ + M G + Y L+N Y
Sbjct: 272 EMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKA-RGVQPNSYSYTALINAY--- 327
Query: 144 SHLVNAESSTLVEAEKS--ITQRQWI-----TYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
AE +A ++ + ++Q + TY L+ Y G+ + + +WKS+++
Sbjct: 328 -----AERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEG 382
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
T Y+ IL ++ G KE ++I+++K D+ N LL ++ G KA
Sbjct: 383 CVATRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKP-DLMVYNMLLNSYMRGGRHVKA 441
Query: 257 NE 258
++
Sbjct: 442 SD 443
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 4/188 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T LL Y TE+AE++F R+K + N+ Y ++ Y EK A E I
Sbjct: 284 TFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMI 343
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ V P + TY + + +++ V+ M + G V Y+ +++ +
Sbjct: 344 RKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVE-GCVATRVTYMTILDAFQKQGR 402
Query: 146 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
E+ L+E K+ + + Y+ L+ Y G K I ++ S Y
Sbjct: 403 Y--KEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTY 460
Query: 205 ICILSSYL 212
++ +L
Sbjct: 461 CTLIYGFL 468
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S +YTAL++ YA + EKA FE +++ ++ Y ++ Y G +E V V +
Sbjct: 317 SYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWK 376
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K + V TY + + + + ++E + G D + Y L+N Y+
Sbjct: 377 SMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFK-NQGHKPDLMVYNMLLNSYMRG 435
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
V A S L+E + + TY LI Y L +D+ K+L+ ++ M
Sbjct: 436 GRHVKA-SDILLEMKTAGFLPDSFTYCTLI--YGFLRVRDQT----KALKYHREMM 484
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T ETYTALL Y A E + +++ +K + Y ++ + G+ ++ +
Sbjct: 350 PTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDL 409
Query: 82 VEEIKRKNVVPDIFTYNLWISS 103
+EE K + PD+ YN+ ++S
Sbjct: 410 IEEFKNQGHKPDLMVYNMLLNS 431
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY +L + ++A +L E K + ++YN ++ YM G+ K + ++
Sbjct: 386 TRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDIL 445
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
E+K +PD FTY I + + K+ EM + G D Y L I
Sbjct: 446 LEMKTAGFLPDSFTYCTLIYGFLRVRDQTKALKYHREM-MNRGQLPDPKTYAKLRAI 501
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ A ++AE+L ER+K S + + + Y+ + G+V V+E++
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P++ TYN + + ID + +++M+ G + V Y +V+
Sbjct: 249 RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 146 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTS 201
E+ +++EA ++ + +TY L+ GL KI++ +++R M K +
Sbjct: 309 --TQEARSVMEAMARAGCRPDVVTYSSLV---NGLCKAGKIEEAVEAVREMAMEGCKPNA 363
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT----SDFDISACNRLLGAFSDVGLTEKAN 257
Y ++ G L E ++++ +S N L+G G + A
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDAL 423
Query: 258 EFHMLLLQKNCAPTNAS 274
+F + + C P S
Sbjct: 424 KFFQRMRSQGCDPDGVS 440
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 2/245 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ LL Y A E++ EL + V L +ALMY +++ ++ + ++EE+
Sbjct: 84 TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEM 143
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R P + T+N IS C N++ L +M+ SG D V Y L++ A
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA-ASGVKADVVTYNTLMDGLCKAGR 202
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L AE L + S + Y + G Q+ + +R + Y
Sbjct: 203 LQEAE-QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYN 261
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
IL G + E+++Q S ++ + ++ +G T++A + +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 266 KNCAP 270
C P
Sbjct: 322 AGCRP 326
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L++ A E+A E + NA+ Y ++ S G++ + +VEE+
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Query: 86 -----KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ P + TYN I ID KF M G D V Y +V
Sbjct: 390 SSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMR-SQGCDPDGVSYSTIVEGL 448
Query: 141 ITASHLVNAE 150
+ + AE
Sbjct: 449 ARSGRALQAE 458
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++++L+ +++ + ++A F +K+ L + ++Y +M Y G + + + +E+
Sbjct: 108 SFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 167
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V D+ YN ++ + K DEM + G D+ + L++ + +
Sbjct: 168 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM-VERGALPDFYTFTTLIHGHCQDGN 226
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S +++I + + Y+ LI + +G +K ++W + K Y
Sbjct: 227 MTKALSLFGTMTQRNI-KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYG 285
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++++Y +GH+ E + D + + CN ++ + G + KA+EF ++
Sbjct: 286 ILINAYCSVGHVSEAFRLWDVMIEKGIKP-TLVTCNTVIKGYCRSGDSSKADEFLGRMIA 344
Query: 266 KNCAPTNAS 274
K AP + S
Sbjct: 345 KGVAPDHIS 353
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ Y E+A E+ + L + YN ++ G+ + ++ E+
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 86 KRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ PD TYN L + SC N + K+ EM G D V + +L+ ++
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRD-NFSEAKEIFGEM-LRQGVVPDLVSFSSLMAVFSRNR 120
Query: 145 HLVNA 149
HL A
Sbjct: 121 HLDQA 125
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 8/247 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ + K E+A ELF+ + + N Y +++ Y G+ ++ ++E++K
Sbjct: 163 YVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAFSLLEQMK 222
Query: 87 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
PD+ TY++ I SC + ++VK +++M+ +G + V Y L++ Y A
Sbjct: 223 ATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMA-RAGIRPNVVTYNTLIDAYGKAGR 281
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
ES+ L ++ W T + + + G G + ++ ++ + + + Y
Sbjct: 282 FAEMESTLLEMLTENCKPDVW-TMNSTLRAFGGSGQIETMESCYEKFQASGISPNIKTYN 340
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 263
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 341 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 399
Query: 264 --LQKNC 268
++ NC
Sbjct: 400 ERIKPNC 406
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P +TY+ L+ A E+ + L E + ++ + N + YN ++ Y G+ +
Sbjct: 225 PGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAE 284
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ + E+ +N PD++T N + + + I+ ++ ++ SG S + Y L+
Sbjct: 285 MESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQA-SGISPNIKTYNILL 343
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ Y A + + + +K +TY+ +I + G+ ++++ I++ ++ +
Sbjct: 344 DSYGKA-KMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERI 402
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKA 256
K ++ +Y G +K++ ++ + S + DI N L+ AF VG L E
Sbjct: 403 KPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDIT-LDIVFFNCLVDAFGRVGCLAEMW 461
Query: 257 NEFHMLLLQKNCAP 270
+ ++ LQ+ C P
Sbjct: 462 DVLDIMKLQR-CKP 474
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVAL- 80
T + Y A++ +YA K + + + +++ + + +N ++ + G + VA+
Sbjct: 209 TVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIE 268
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E++R + PDI TYN IS+C+ N+++ K D+M D W Y ++++Y
Sbjct: 269 LLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWT-YNAMISVY 327
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 188
AE E E +TY+ L+ +A GN DK+ +I
Sbjct: 328 GRCGFSGKAE-QLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEI 374
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ +Y ++ KAE+LF+ ++ +A+ YN ++ + G V+KV + E+
Sbjct: 319 TYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEM 378
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + D TYN I + +M SG + D + Y L++ A+
Sbjct: 379 VQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKL-SGRTPDAITYTVLIDSLGKANK 437
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+V A ++ + E + TY LI YA G + + ++ + +R + + Y
Sbjct: 438 MVEA-ANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYS 496
Query: 206 CILSSYL 212
+L +L
Sbjct: 497 VMLDVFL 503
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY+AL+ YA A +AEE F+ +++S + + L Y+ M+ +++ + K ++
Sbjct: 456 TLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLY 515
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
E+ R + PD Y + + ++ +++ + +M
Sbjct: 516 REMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDM 553
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L LY G K ++++R+K+ L + YN ++ +Y + E+ ++ E++
Sbjct: 913 WNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMR 972
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R + P + TY I++ + ++ +E+ G D Y ++ IY + +
Sbjct: 973 RIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEEL-LSKGSKLDRSFYHIMMKIYRNSGNH 1031
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE L + + + T L++ Y G + +++ +L+ +++ Y
Sbjct: 1032 SKAE-KLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSS 1090
Query: 207 ILSSYL 212
++ +YL
Sbjct: 1091 VIDAYL 1096
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 10/210 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + E+A ++F+ ++ + YN M+++Y G K + +E+
Sbjct: 284 TYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKEL 343
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY-ITAS 144
+ K PD TYN + + A N+D+VK+ +EM G D + Y ++++Y
Sbjct: 344 ESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEM-VQMGFIRDEMTYNTIIHMYGKQGQ 402
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 201
H + + + + S ITY LI LG +K+ + + + K T
Sbjct: 403 HGLALQ--LYRDMKLSGRTPDAITYTVLI---DSLGKANKMVEAANVMSEMLNIGVKPTL 457
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
R Y ++ Y G E E D ++S
Sbjct: 458 RTYSALICGYARAGQRLEAEETFDCMRRSG 487
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ + + AEELFE + + Y+ MM +Y + G K ++
Sbjct: 981 DTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSM 1040
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+K V P I T +L + S ++ + +K L + + G S + Y ++++ Y+
Sbjct: 1041 MKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLK-EMGLSLSTLPYSSVIDAYL 1096
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 94/237 (39%), Gaps = 10/237 (4%)
Query: 2 TKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 59
+V I ++ ++G+ + T Y ++ L K E + ++++ +
Sbjct: 851 ARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDL 910
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
++N M+ LY + K + + IK + PD TYN I ++ + E
Sbjct: 911 SIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHE 970
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE---AEKSITQRQWITYDFLIILY 176
M G Y +L+ + +V+AE L E ++ S R + Y ++ +Y
Sbjct: 971 MR-RIGLEPKLDTYKSLIAAFGKQQLVVDAEE--LFEELLSKGSKLDRSF--YHIMMKIY 1025
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
GN K +++ ++ + T ++ SY G +E +++ K+ S
Sbjct: 1026 RNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLS 1082
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 17/255 (6%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T++TYT L+++Y + A+ +F+ ++ N + ++ G EK +
Sbjct: 259 TTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIF 318
Query: 83 EEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
E+++ PD++ YN + S ++ + M C+ D Y +V+
Sbjct: 319 EQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDA 374
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQK 198
Y A ++ ++ + E K I + L++ Y+ GN K + I +M K
Sbjct: 375 YGRAG--LHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIG--QMHKSG 430
Query: 199 MTSRNYICILSSYLML-GHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEK 255
+ + +++S L L G L + G++ D + Q DIS N L+ + G E+
Sbjct: 431 LKPDTF--VMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVER 488
Query: 256 ANEFHMLLLQKNCAP 270
E LL KN P
Sbjct: 489 MEELFQLLPAKNLEP 503
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P A S TY L+++Y A + E+ EELF+ + NL + + + + Y ++
Sbjct: 465 PCRADIS-TYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKR 523
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
+ E++ PD T + +S+C++ I+QV + M D
Sbjct: 524 CLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 569
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 87/248 (35%), Gaps = 38/248 (15%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ Y + E + + +S+ Y ++ Y G +EK V E++
Sbjct: 158 YNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMR 217
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + P YN +I GG++ VK V + +
Sbjct: 218 KYGLSPSAIVYNAYIDGLV------------------KGGNN--VKAVEIFH-------- 249
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
++ Q TY LI +Y I+ +R + K +
Sbjct: 250 ---------RMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTA 300
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++++ G ++ EI +Q Q A + D+ A N L+ ++S G A E L+
Sbjct: 301 LVNALAREGLCEKAEEIFEQM-QEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHM 359
Query: 267 NCAPTNAS 274
C P AS
Sbjct: 360 GCEPDRAS 367
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 112/241 (46%), Gaps = 6/241 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEE-LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY +++ Y A E+ ++ L + ++ N + N + Y + GQ++K+ +E
Sbjct: 232 TYNSIIDGYGKASMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDE 291
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + PDI T+N I S +++K +D M + V Y ++ ++ A
Sbjct: 292 FQLMGIKPDITTFNTMIKSYGKAGMYEKMKTVMDFME-KRFFTPTIVTYNTVIEVFGKAG 350
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + L + ITY L+ Y+ +G DK+D I + + + + + +
Sbjct: 351 EIEKMDQHFLKMKHLGVKPNS-ITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFF 409
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS-ACNRLLGAFSDVGLTEKANEFHMLL 263
CI+S+Y G+LK++GE+ ++ +I+ AC ++ +++ G+TE ++
Sbjct: 410 NCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFAC--MIQSYNTQGMTEAVQNLENMM 467
Query: 264 L 264
+
Sbjct: 468 I 468
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY LL + + E+A LFE + L +Y +++ Y G +++ VE+
Sbjct: 125 RTYAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFSTVED 184
Query: 85 IKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K + PD++TY++ I CA D ++ L EMS G + V Y ++++ Y A
Sbjct: 185 MKSVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSY-LGIKCNCVTYNSIIDGYGKA 243
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
S + + E + T + + Y G DK+++ + ++ K
Sbjct: 244 SMFEQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITT 303
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ ++ SY G +++ ++D ++ + I N ++ F G EK ++ H L
Sbjct: 304 FNTMIKSYGKAGMYEKMKTVMDFMEKRFFTP-TIVTYNTVIEVFGKAGEIEKMDQ-HFLK 361
Query: 264 LQ 265
++
Sbjct: 362 MK 363
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+ + EKA ELF+ + ++ S +A++Y +++ G++++ + V+ ++
Sbjct: 488 TYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM 547
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K PDI ++N+ I+ +D+ + L EM ++G D V Y L++ +
Sbjct: 548 KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEME-NAGIKPDGVTYNTLISHFSKTGD 606
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
A ++ + +TY LI Y GN D+ +I++ + T +
Sbjct: 607 FSTAHRLMKKMVKEGLVP-TVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK 657
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P + TY L+ Y A E A ELF+++ + + N + N ++ G++
Sbjct: 410 PRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRING 469
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
E++ K + + TY I + NI++ + DEM ++G S D + Y L+
Sbjct: 470 AVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM-LEAGCSPDAIVYYTLI 528
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+ A L A S L + +++ ++++ LI G K+K+D+ ++ L+
Sbjct: 529 SGLSQAGKLDRA-SFVLSKMKEAGFSPDIVSFNVLI---NGFCRKNKLDEAYEMLK 580
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVK--QSN---LSFNALMYNEMMTLYMSVGQVEKVAL 80
T+ L++ + ++A E+FE++ +SN + + + YN ++ VG+ E+
Sbjct: 342 TFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLG 401
Query: 81 VVEEIK-RKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+VE ++ + +P+ TYN I C A++ I+ ++ D+M+ D G V +N +
Sbjct: 402 LVERMRSQPRCMPNTVTYNCLIDGYCKASM-IEAARELFDQMNKD--GVPPNVVTLNTLV 458
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
+ +N E + + +TY LI + + N +K +++ +
Sbjct: 459 DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS 518
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 247
+ Y ++S G L ++ + K++ S DI + N L+ F
Sbjct: 519 PDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSP-DIVSFNVLINGF 566
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/113 (18%), Positives = 55/113 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++ L++ + ++A E+ + ++ + + + + YN +++ + G +++++
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ +VP + TY I + N+D+ K +MS S + V Y L+N
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV--EKVALVVE 83
+YTAL++ Y E + EL ER+K+ +S N L YN ++ + G + E + +
Sbjct: 185 SYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINA-CARGDLDWEGLLGLFA 243
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ + V PD+ TYN +S+CAA D+ + M + G + Y +V +
Sbjct: 244 EMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM-IEGGIVPEITTYSYIVETFGKL 302
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L + L E E +Y+ LI +A LG+ + ++K ++ +
Sbjct: 303 GKLEKV-AMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAST 361
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y +L+ Y G +V E+ Q K+S +++ D + N L+ F + G ++ L
Sbjct: 362 YSILLNLYGKHGRYDDVRELFLQMKES-SAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
Query: 264 LQKNCAP 270
+ +N P
Sbjct: 421 VDENIDP 427
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 4/245 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ L EK E+F+ + + + Y ++ Y GQ E ++E +K
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 87 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ V P+I TYN I++CA L+ + + EM + G D V Y L++
Sbjct: 211 RERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE-GVQPDLVTYNTLLSACAARGL 269
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
AE E I + TY +++ + LG +K+ + K + +Y
Sbjct: 270 GDEAEMVFKTMIEGGIVP-EITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYN 328
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ ++ LG +KE ++ Q Q+A + S + LL + G + E + + +
Sbjct: 329 VLIEAHAKLGSIKEAMDVFKQM-QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKE 387
Query: 266 KNCAP 270
+ P
Sbjct: 388 SSAEP 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 105/239 (43%), Gaps = 11/239 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY+ LL+LY + ELF ++K+S+ +A YN ++ ++ G ++V +
Sbjct: 359 ASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFH 418
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ +N+ P++ TY + +C + KK L M+ G Y L+ Y A
Sbjct: 419 DLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMN-GKGIVPSSKAYSGLIEAYGQA 477
Query: 144 S----HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ LV + V ++ +I TY+ LI +A G + + I +R
Sbjct: 478 ALYDEALVAFNTMNEVGSKSTID-----TYNSLIHTFARGGLYKEFEAILSRMREYGISR 532
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
++++ I+ Y G +E + + ++ + D +LG + GL +++ E
Sbjct: 533 NAKSFSGIIEGYRQSGQYEEAIKAFVEMEK-MRCELDEQTLEGVLGVYCFAGLVDESKE 590
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
N +Y +++L G +EK + + +E+ + V+ +F+Y I++ + + L
Sbjct: 147 NEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL 206
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
+ M + S + + Y ++N E Q +TY+ L+ A
Sbjct: 207 ERMKRER-VSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACA 265
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
G D+ + ++K++ Y I+ ++ LG L++V ++ + + DI
Sbjct: 266 ARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLP-DI 324
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
S+ N L+ A + +G ++A + + C P NAS
Sbjct: 325 SSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVP-NAS 360
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 6/260 (2%)
Query: 14 FEGLPLSAKTSETY--TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
FE +PL+ Y TAL++ Y E + L R+K+ ++ N + YN ++
Sbjct: 97 FEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAK 156
Query: 72 VG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
G + E + + +++ + + PDI TYN +S+C++ +++ M+ ++G D
Sbjct: 157 GGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMN-EAGVVPDS 215
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
+ Y LV+IY A L E E++ + Y+ LI Y G +++K
Sbjct: 216 ITYNALVDIYGQADRHEGV-GELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFK 274
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
++ + +L +Y G EV + K+ T D++ N L+ F
Sbjct: 275 QMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEP-DVNTYNTLIQVFGQG 333
Query: 251 GLTEKANEFHMLLLQKNCAP 270
G +++ LL P
Sbjct: 334 GFFQESINLFWDLLDGGVEP 353
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 110/248 (44%), Gaps = 10/248 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ + +KA ELFE + +++ +N + ++ Y GQ E ++ +K
Sbjct: 77 YTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMK 136
Query: 87 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ V P++ TYN I++CA L + + +M + G D + Y L++ ++
Sbjct: 137 REKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHE-GIQPDIITYNTLLSA-CSSRG 194
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
LV ++ ITY+ L+ +Y G D+ + + + LR +Q + +
Sbjct: 195 LVEEAGMVFRTMNEAGVVPDSITYNALVDIY---GQADRHEGVGELLREMEQAGNAPDVV 251
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ +Y G + ++ Q +++ + D+ + LL A+ G ++
Sbjct: 252 AYNILIEAYGRAGKYRAAAKMFKQMQEAGCTP-DVVTFSTLLEAYGKHGCYDEVRLLFTD 310
Query: 263 LLQKNCAP 270
+ ++ P
Sbjct: 311 MKERGTEP 318
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 108/285 (37%), Gaps = 44/285 (15%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY AL+ +Y A E EL ++Q+ + + + YN ++ Y G+ A + +
Sbjct: 215 SITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFK 274
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY--- 140
+++ PD+ T++ + + D+V+ +M + G D Y L+ ++
Sbjct: 275 QMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMK-ERGTEPDVNTYNTLIQVFGQG 333
Query: 141 -----------------------ITASHLVNAESSTLVEAEKSITQRQWITY-----DFL 172
A L + L +A K I + +Y D
Sbjct: 334 GFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGF 393
Query: 173 IILYAGLGNK---DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE----IID 225
L GN + + S++ + K Y ++ ++ G E G +ID
Sbjct: 394 TGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMID 453
Query: 226 QWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + D+S N L+ AF GL + A EF + + C+P
Sbjct: 454 EGISA-----DVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSP 493
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
+SA S TY +L+ + + A E ++++ S N Y +M +Y + G ++
Sbjct: 456 ISADVS-TYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEA 514
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+++ +P + +Y L +S CA D K L+EM
Sbjct: 515 KAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM 556
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
G+P +TS TY++L+H + + A +L + +++ LS N + Y ++ Y +GQ
Sbjct: 611 RGIP---QTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ KV +++E+ NV P+ TY + I+ N+ K L+EM+ G D V Y
Sbjct: 668 MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMA-QKGIVPDAVTYN 726
Query: 135 NLVN 138
L N
Sbjct: 727 ALTN 730
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 102/237 (43%), Gaps = 3/237 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + T AL+H A E+A +L + + + L +++ YN ++ G+VE+
Sbjct: 439 AANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFK 498
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ EE+ R+ + PD++TYN+ + I++ E +G D Y +++ Y
Sbjct: 499 LKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK-KNGNFPDAYTYGIMIDGY 557
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A+ + E E ++ + Y LI Y GN + ++ +R T
Sbjct: 558 CKANRVEEGE-KLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQT 616
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
S Y ++ +G + +++D+ ++ S ++ L+G + +G K +
Sbjct: 617 SATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP-NVVCYTALIGGYCKLGQMHKVD 672
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 3/231 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LLH E+A L+ K++ +A Y M+ Y +VE+ + +E+
Sbjct: 514 TYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + Y I + N+ + + D+M G Y +L++ ++
Sbjct: 574 VTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR-SRGIPQTSATYSSLIH-GLSNIG 631
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV++ + L E K + Y LI Y LG K+D I + + + Y
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+++ + LG++K +++++ Q D N L F G E+A
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVP-DAVTYNALTNGFCKEGKMEEA 741
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YTAL+ Y K + + + + +N+ N + Y M+ + +G ++ A ++ E+
Sbjct: 655 YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMA 714
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+K +VPD TYN + +++ K D MS G S D + Y L++
Sbjct: 715 QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMS-TGGISLDDITYTTLID 765
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
++ +++ + + A ELF ++++ ++ N + YN ++ G++++ E+++
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKME 259
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
++ V P + TY + I+ D+ L EMS D G + + V Y L++ Y ++
Sbjct: 260 KERVKPSLVTYGVLINGLVKLERFDEANCILKEMS-DRGYAPNNVVYNTLIDGYCRIGNI 318
Query: 147 VNA 149
A
Sbjct: 319 STA 321
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A EL+ R+ + + N + N ++ G E+ A +++E+ + +V D +YN I
Sbjct: 425 EAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLI 484
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+C +++ K +EM G D Y L++ + A E +K+
Sbjct: 485 LACCKEGKVEEGFKLKEEM-VRRGIQPDMYTYNMLLHGLCNMGKIEEA-GGLWHECKKNG 542
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
TY +I Y ++ +++++ + K + + Y ++ +Y G+++E
Sbjct: 543 NFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAF 602
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ D + + + L+ S++GL + AN+
Sbjct: 603 RLRDDMRSRGIPQTSATY-SSLIHGLSNIGLVDSANQL 639
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 5/249 (2%)
Query: 27 YTALLHLYAGAK-WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+ L+ Y K WTE AE F +K+ +N +M Y GQ+E+ V+ E+
Sbjct: 104 FNMLMDAYGRTKQWTE-AENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEM 162
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K N P + TYN ++ + + + EM + G + ++NIY A H
Sbjct: 163 KESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQ-NRGVPPAVNTFTLMINIYGKAHH 221
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
AE K++ TY LI +A GN + ++I+ L+ Y
Sbjct: 222 SAKAE-HLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYN 280
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L +Y GH E+ + ++ +S N L+ AF GL A + + +
Sbjct: 281 ALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSY-NILIDAFGRAGLISDAQAIYDSMKK 339
Query: 266 KNCAPTNAS 274
PT S
Sbjct: 340 VGFKPTMKS 348
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/295 (18%), Positives = 123/295 (41%), Gaps = 39/295 (13%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
G+P + T +T ++++Y A + KAE LF+ ++++ + Y ++ + G
Sbjct: 200 RGVPPAVNT---FTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGN 256
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ + E++ VPDI+TYN + + + + K+ + M ++G D V Y
Sbjct: 257 CVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETM-LEAGVKADHVSYN 315
Query: 135 NLVNIYITASHLVNAES---------------------STLVEAEKSITQRQWIT----- 168
L++ + A + +A++ S V+A + ++
Sbjct: 316 ILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESM 375
Query: 169 --------YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
++ L+ Y G DK++ +++S++ + K +++ Y G+++
Sbjct: 376 GVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERA 435
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNASG 275
EI + + + D+ + L+GA+S L K + +L C P A+
Sbjct: 436 EEIFNSLESKGFTP-DVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATA 489
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 113/294 (38%), Gaps = 46/294 (15%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE--------- 64
F+ LP T ++ L+ Y+ E+AE + +K+SN S + YN
Sbjct: 130 FQCLP----TETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSG 185
Query: 65 --------------------------MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYN 98
M+ +Y K + + +++ P +FTY
Sbjct: 186 SWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYT 245
Query: 99 LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVE 156
I++ A N + ++ E+ G D Y L+ Y H A+ T++E
Sbjct: 246 ALINAHAREGNCVRAEEIFAELQ-SVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLE 304
Query: 157 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 216
A + ++Y+ LI + G I+ S++ K T +++I +LS+++ G
Sbjct: 305 AG---VKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGR 361
Query: 217 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + + + +S + D N LLGA+ + G +K + + C P
Sbjct: 362 VTDAENFVRRL-ESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKP 414
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T L+++YA + E+AEE+F ++ + + + + +M Y K V +++
Sbjct: 418 TLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKM 477
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+PD T + +SSC +QVK+ D
Sbjct: 478 LIAGCIPDRATAKVLLSSCRGP---EQVKEVTD 507
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV--EKVALVVE 83
+YTAL++ Y E + EL ER+K+ +S N L YN ++ + G + E + +
Sbjct: 185 SYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINA-CARGDLDWEGLLGLFA 243
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ + V PD+ TYN +S+CAA D+ + M + G + Y +V +
Sbjct: 244 EMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTM-IEGGIVPEITTYSYIVETFGKL 302
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L + L E E +Y+ LI +A LG+ + ++K ++ +
Sbjct: 303 GKLEKV-AMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAST 361
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y +L+ Y G +V E+ Q K+S +++ D + N L+ F + G ++ L
Sbjct: 362 YSILLNLYGKHGRYDDVRELFLQMKES-SAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420
Query: 264 LQKNCAP 270
+ +N P
Sbjct: 421 VDENIDP 427
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 4/245 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ L EK E+F+ + + + Y ++ Y GQ E ++E +K
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 87 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ V P+I TYN I++CA L+ + + EM + G D V Y L++
Sbjct: 211 RERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHE-GVQPDLVTYNTLLSACAARGL 269
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
AE E I + TY +++ + LG +K+ + K + +Y
Sbjct: 270 GDEAEMVFKTMIEGGIVP-EITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYN 328
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ ++ LG +KE ++ Q Q+A + S + LL + G + E + + +
Sbjct: 329 VLIEAHAKLGSIKEAMDVFKQM-QAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKE 387
Query: 266 KNCAP 270
+ P
Sbjct: 388 SSAEP 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 105/239 (43%), Gaps = 11/239 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY+ LL+LY + ELF ++K+S+ +A YN ++ ++ G ++V +
Sbjct: 359 ASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFH 418
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ +N+ P++ TY + +C + KK L M+ G Y L+ Y A
Sbjct: 419 DLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMN-GKGIVPSSKAYSGLIEAYGQA 477
Query: 144 S----HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ LV + V ++ +I TY+ LI +A G + + I +R
Sbjct: 478 ALYDEALVAFNTMNEVGSKSTID-----TYNSLIHTFARGGLYKEFEAILSRMREYGISR 532
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
++++ I+ Y G +E + + ++ + D +LG + GL +++ E
Sbjct: 533 NAKSFSGIIEGYRQSGQYEEAIKAFVEMEK-MRCELDEQTLEGVLGVYCFAGLVDESKE 590
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
N +Y +++L G +EK + + +E+ + V+ +F+Y I++ + + L
Sbjct: 147 NEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELL 206
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
+ M + S + + Y ++N E Q +TY+ L+ A
Sbjct: 207 ERMKRER-VSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACA 265
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
G D+ + ++K++ Y I+ ++ LG L++V ++ + + DI
Sbjct: 266 ARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLP-DI 324
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
S+ N L+ A + +G ++A + + C P NAS
Sbjct: 325 SSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVP-NAS 360
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G+ E+Y E +P S + Y LL A + K EE F ++++ A
Sbjct: 217 IAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFPVTAF 276
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ L +K+A V+ ++++NV P +TY + I + +ID + + ++ M
Sbjct: 277 ACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDGMSQIVETM 335
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
+ G D + +L Y A+ L + L E E +++ + W+ L+ LYA L
Sbjct: 336 KAE-GCELDHLTRASLARHY-AAAGLTEKTEAILKEIEGENLKENMWVC-PTLLRLYAIL 392
Query: 180 GNKDKIDQIWK-------------------------------SLRMTKQKMTSRNYICIL 208
G D++++IWK + K K+T+RNY +L
Sbjct: 393 GRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTARNYESLL 452
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 267
Y+ L + ++I S + + + L+ + G EKA+ LQ+N
Sbjct: 453 KIYIRHKMLNKGKDLIKTMGDSGCT-IGPTTWDALVSLYVQAGEVEKADTVLQKALQQN 510
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T +L YA A TEK E + + ++ NL N + ++ LY +G+ ++V + +
Sbjct: 346 TRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVC 405
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW----VKYVNLVNIYI 141
+ K V D I + I++ + + M S+ W Y +L+ IYI
Sbjct: 406 ESKPRVEDCLAA---IEAWGRLKKIEEAEAVFEMM------SNKWKLTARNYESLLKIYI 456
Query: 142 TASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW-KSLRMTKQK 198
L + T+ ++ +I W D L+ LY G +K D + K+L+ K K
Sbjct: 457 RHKMLNKGKDLIKTMGDSGCTIGPTTW---DALVSLYVQAGEVEKADTVLQKALQQNKMK 513
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
++ I+ Y G + +I + +Q+
Sbjct: 514 PMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQA 545
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 7 IHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
I E FE + K T+ Y +LL +Y K K ++L + + S + ++ +
Sbjct: 427 IEEAEAVFEMMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDAL 486
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
++LY+ G+VEK V+++ ++N + +FT
Sbjct: 487 VSLYVQAGEVEKADTVLQKALQQNKMKPMFT 517
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+ G+ E Y +P S + Y LL + KAEE+F ++K A
Sbjct: 208 KLRGLRMAENYISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVFNKMKDLEFPITAFAC 267
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N+++ LY + +K+A V+ ++++NV P FTY + I + + +I +++ +D M
Sbjct: 268 NQLLLLYKRTDK-KKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDISGMEQVVDTMKA 326
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ G V + L+ + ++ L + +TL E E+ ++ FL+ LY L +
Sbjct: 327 E--GIKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRRPCRFLLPLYGELQME 384
Query: 183 DKIDQIWK 190
D++ ++W+
Sbjct: 385 DEVRRLWE 392
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G+ E+Y E +P S + Y LL A + K EE F ++++ A
Sbjct: 168 IAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFPVTAF 227
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ L +K+A V+ ++++NV P +TY + I + +ID + + ++ M
Sbjct: 228 ACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDGMSQIVETM 286
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
+ G D + +L Y A+ L + L E E +++ + W+ L+ LYA L
Sbjct: 287 KAE-GCELDHLTRASLARHY-AAAGLTEKTEAILKEIEGENLKENMWVC-PTLLRLYAIL 343
Query: 180 GNKDKIDQIWK-------------------------------SLRMTKQKMTSRNYICIL 208
G D++++IWK + K K+T+RNY +L
Sbjct: 344 GRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKWKLTARNYESLL 403
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 267
Y+ L + ++I S + + + L+ + G EKA+ LQ+N
Sbjct: 404 KIYIRHKMLNKGKDLIKTMGDSGCT-IGPTTWDALVSLYVQAGEVEKADTVLQKALQQN 461
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T +L YA A TEK E + + ++ NL N + ++ LY +G+ ++V + +
Sbjct: 297 TRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVC 356
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW----VKYVNLVNIYI 141
+ K V D I + I++ + + M S+ W Y +L+ IYI
Sbjct: 357 ESKPRVEDCLAA---IEAWGRLKKIEEAEAVFEMM------SNKWKLTARNYESLLKIYI 407
Query: 142 TASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW-KSLRMTKQK 198
L + T+ ++ +I W D L+ LY G +K D + K+L+ K K
Sbjct: 408 RHKMLNKGKDLIKTMGDSGCTIGPTTW---DALVSLYVQAGEVEKADTVLQKALQQNKMK 464
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
++ I+ Y G + +I + +Q+
Sbjct: 465 PMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQA 496
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 7 IHSGERYFEGLPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
I E FE + K T+ Y +LL +Y K K ++L + + S + ++ +
Sbjct: 378 IEEAEAVFEMMSNKWKLTARNYESLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDAL 437
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
++LY+ G+VEK V+++ ++N + +FT
Sbjct: 438 VSLYVQAGEVEKADTVLQKALQQNKMKPMFT 468
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 37/273 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++ +K E+A +LF+ ++Q ++ N +MY ++ Y G+V++ L++E++
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 86 KRKNVVPDIFTYNLWISS-CA--------------------ATLNIDQ--VKKFLDEMSC 122
KN +P+ T+N I CA T++ D + + L +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 123 D-----------SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 171
D SG D Y + Y L++AE E ++ TY
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP-DLFTYSS 677
Query: 172 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
LI Y LG + + K +R T + + ++ ++ L + + K+ G + S
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+FD LL + +T A + L+L
Sbjct: 738 MMEFDTVV--ELLEKMVEHSVTPNAKSYEKLIL 768
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 96/244 (39%), Gaps = 3/244 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y LL+ A ++ ++++ + + + N YN+M+ Y +G VE+ V +I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ PD FTY I ++D K +EM G + V Y +L++ A
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL-KGCRRNEVAYTHLIHGLCVARR- 303
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
++ V+ + TY LI G K + + K + T K Y
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ S ++ E++ Q + ++ N L+ + G+ E A + L+ +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 267 NCAP 270
+P
Sbjct: 423 KLSP 426
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 45/250 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ EKA EL ++ + L N + YN ++ Y G +E VVE +
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + P+ TYN I + N+ + L++M + D V Y +L++ + +
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGN 477
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+A + ++ + QW TY + ID + KS R
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQW-TYTSM------------IDSLCKSKR------------ 512
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 263
++E ++ D +Q + ++ L+ + G K +E H++L
Sbjct: 513 -----------VEEACDLFDSLEQKGVNP-NVVMYTALIDGYCKAG---KVDEAHLMLEK 557
Query: 264 -LQKNCAPTN 272
L KNC P +
Sbjct: 558 MLSKNCLPNS 567
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKV 78
S T + Y A++ +YA K +EL + ++ + + +N ++ + G V +
Sbjct: 193 SGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNL 252
Query: 79 AL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
A+ ++ E++R + PDI TYN IS+C+ N+++ K ++M D W Y ++
Sbjct: 253 AIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT-YNAMI 311
Query: 138 NIYITASHLVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LR 193
++Y ++ E+ L + E +TY+ L+ +A GN DK+ +I + +
Sbjct: 312 SVYGRCG--MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 369
Query: 194 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 253
K +MT Y I+ Y G ++ K S S D L+ + +
Sbjct: 370 FGKDEMT---YNTIIHMYGKRGQHDLAFQLYSDMKLSGRSP-DAVTYTVLIDSLGKANMI 425
Query: 254 EKANEFHMLLLQKNCAPT 271
++A E +L PT
Sbjct: 426 KEAAEVMSEMLNARVKPT 443
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P +A Y A L A+ TEKA E+++R+K+ N + M+ +Y Q
Sbjct: 240 GIPPNATV---YNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 296
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 297 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 355
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
L+ Y A L S + + +Y+ L+ Y G + + +++ L+
Sbjct: 356 LMEAYSRAG-LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 414
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
T ++++ +L+++ G+ E++ Q +S + D A N +L A++ G
Sbjct: 415 GMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP-DTFALNAMLNAYARAG 469
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ET+T ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 280 TETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFE 339
Query: 84 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+++ PD++ YN + S ++ + M C+ D Y LV+ Y
Sbjct: 340 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP----DRASYNILVDAY 395
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A +AE + E ++ ++ L+ +A GN + +++ L K +T
Sbjct: 396 GRAGLHEDAE-AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLH--KSGLT 452
Query: 201 SRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ +L++Y G L ++ + ++ D D+ N + A+ G
Sbjct: 453 PDTFALNAMLNAYARAGRLDDMERLFAAMERRG--DADVGTYNVAVNAYGRAG 503
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 95/249 (38%), Gaps = 40/249 (16%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ Y + KAE ++ + ++ Y ++ Y + G + + V+ E++
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 237
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P+ YN ++ ++ + M + ++ + ++N+Y A
Sbjct: 238 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTET-FTLMINVYGKAKQP 296
Query: 147 VNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ S + KSI + I TY L+ +A G +K +++++ +
Sbjct: 297 MS--SMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM------------- 341
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 342 -----------------------QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 378
Query: 266 KNCAPTNAS 274
C P AS
Sbjct: 379 MGCEPDRAS 387
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 38/247 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY + + E+A LF+ + + +S N +MY+ ++ Y VG+V++ + E++
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM 423
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KN P+ +T+N I + N+ + D+M VK +Y
Sbjct: 424 LSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQM----------VKMGLKPTVY----- 468
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
T++ LI G+ D + + + + +K +R Y
Sbjct: 469 ----------------------TFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYN 506
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+ Y G ++E +++ Q K+ D + L+ A+ +GLT A + +
Sbjct: 507 AFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY-TSLIKAYGKLGLTYSAFDVLKSMFD 565
Query: 266 KNCAPTN 272
+C P++
Sbjct: 566 ADCEPSH 572
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 7 IHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ R F+ L ++ Y+ L+ Y ++A LFE++ N S NA +N
Sbjct: 378 VEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNA 437
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ S G +++ + +++ + + P ++T+N+ I + D K L +M S
Sbjct: 438 LIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM-SS 496
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
G Y + +Y +A + AE + E+ + + TY LI Y LG
Sbjct: 497 GEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDF-TYTSLIKAYGKLG 551
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 5/220 (2%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 66
+ S R FE +P + +Y L+H A ++A LF R+K N Y ++
Sbjct: 243 VDSAFRVFEEMP--NRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALI 300
Query: 67 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
+ V K +++E+ +N+VPD+ TYN I+ ++D + L M + G
Sbjct: 301 K-GLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMK-ERGL 358
Query: 127 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 186
D Y ++ ++ + A E+ ++ I Y LI Y +G D+
Sbjct: 359 VPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSA-NVIMYSVLIDGYCKVGKVDEAG 417
Query: 187 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
+++ + + + ++ G+LKE + DQ
Sbjct: 418 CLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQ 457
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 112/277 (40%), Gaps = 35/277 (12%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ Y LL L A ++ +L+ + + +S + +N M+ +Y +G V++ + +
Sbjct: 158 KCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCK 217
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS--------------CDSGGSDDW 130
+ + + PD FT +I + ++D + +EM C++G D+
Sbjct: 218 MIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEA 277
Query: 131 VK-YVNL------VNIYITASHL-------VNAESSTLVEAEKSITQRQWITYDFLIILY 176
V +V + N+Y + + V+ L E + ITY+ LI
Sbjct: 278 VSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLI--- 334
Query: 177 AGLGNKDKIDQIWKSLRMTKQK---MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
AG +D ++ L + K++ R Y C + ++E + D + S
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394
Query: 234 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++ + L+ + VG ++A +L KNC+P
Sbjct: 395 A-NVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSP 430
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 14/213 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ A+ TE+ ++LF+ + +NL N ++YN ++ Y G++ + E++
Sbjct: 604 TYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDM 663
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K K + P+ TY I + +++ K L+EM + G + Y L++ Y
Sbjct: 664 KHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRME-GLEPNVFHYTALIDGYGKLGQ 722
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 202
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 723 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYK 781
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
+I G+LK+ G ++ +K S ++
Sbjct: 782 EFI--------YGYLKQ-GGVLQAFKGSDEENY 805
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ S TYT+L+ + E+A+ L E ++ L N Y ++ Y +GQ+ KV
Sbjct: 669 SPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 728
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+ KNV P+ TY + I A N+ + + L EM + G D + Y + Y
Sbjct: 729 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMR-EKGIVPDSITYKEFIYGY 787
Query: 141 ITASHLVNA 149
+ ++ A
Sbjct: 788 LKQGGVLQA 796
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+T ++ + E+A ELF +++++ + N + YN ++ G+ ++ + E++
Sbjct: 255 FTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMV 314
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ V P + TY++ + I L EM+ + G + + Y NL++ I A L
Sbjct: 315 ERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMT-EKGFPPNVIVYNNLIDSLIEAGSL 373
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTSRN 203
A + K ++ TY+ LI Y G D +++ K S+ + + +
Sbjct: 374 NKAIEIKDLMVSKGLSLTSS-TYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTS 432
Query: 204 YICILSSYLML-GHLKEVGEII 224
IC+L S+ M L+ VGE++
Sbjct: 433 VICLLCSHHMFDSALRFVGEML 454
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 2/235 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+ G K ++A + + + L + Y+ ++ +++ +VE+ +
Sbjct: 534 SYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDC 593
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++PD++TY++ I C ++ +K DEM ++ + V Y +L+ Y +
Sbjct: 594 KRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNN-LQPNTVVYNHLIGAYCRSGR 652
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A K I+ TY LI + + ++ + + +RM + +Y
Sbjct: 653 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYT 711
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
++ Y LG + +V ++ + I+ + G D +TE + H
Sbjct: 712 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLH 766
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 112/249 (44%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++++L+ +++ + ++A F +K+ L + ++Y +M Y G + + + +E+
Sbjct: 260 SFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 319
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V D+ YN ++ + K DEM + G D+ + L++ + +
Sbjct: 320 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM-VERGALPDFYTFTTLIHGHCQDGN 378
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S +++I + + Y+ LI + +G +K ++W + K Y
Sbjct: 379 MTKALSLFGTMTQRNI-KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYG 437
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++++Y +GH+ E + D + + CN ++ + G + KA+EF ++
Sbjct: 438 ILINAYCSVGHVSEAFRLWDVMIEKGIKP-TLVTCNTVIKGYCRSGDSSKADEFLGRMIA 496
Query: 266 KNCAPTNAS 274
K AP + S
Sbjct: 497 KGVAPDHIS 505
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 109/252 (43%), Gaps = 11/252 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L+H + KA LF + Q N+ + + YN ++ + VG++EK + + + +
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+ TY + I++ + ++ + + D M + G V ++ Y +
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM-IEKGIKPTLVTCNTVIKGYCRSGD 483
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ--IWKSLRMTKQKMTSR- 202
A+ K + I+Y+ LI G +D +D+ +W + +M K+ +
Sbjct: 484 SSKADEFLGRMIAKGVAPDH-ISYNTLI---NGFVREDNMDKAFLWIN-KMEKEGLLPDI 538
Query: 203 -NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y +++ + G ++E ++ + + + D S L+ +A FH
Sbjct: 539 ITYNVVMNGFCRQGRMQEAELVLRKMIEKGINP-DRSTYTALINGHVTQDNLNEAFRFHD 597
Query: 262 LLLQKNCAPTNA 273
+LQ+ AP +
Sbjct: 598 EMLQRGFAPDDV 609
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ Y E+A E+ + L + YN ++ G+ + ++ E+
Sbjct: 155 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 214
Query: 86 KRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ PD TYN L + SC N + K+ EM G D V + +L+ ++
Sbjct: 215 LNIGLSPDTTTYNTLLVESCRRD-NFSEAKEIFGEM-LRQGVVPDLVSFSSLIAVFSRNR 272
Query: 145 HLVNA 149
HL A
Sbjct: 273 HLDQA 277
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A++ +Y + K E++ +K+S ++ +A YN +M +Y +G EK ++ EIK
Sbjct: 598 AMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS 657
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
V PD ++YN I + + + + EM C SG D V Y V Y++ S
Sbjct: 658 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNS 712
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +LL +Y A+ ++A E+ + +++ + + YN +++ Y+ G +E+ + +E+
Sbjct: 280 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K + PD+ TY IS ID DEM +G + Y L+ + H
Sbjct: 340 EVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEM-VRNGCKPNLCTYNALIKM-----H 393
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
V + ++ + + +T++ L+ ++ G ++ ++K ++
Sbjct: 394 GVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 453
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y+ ++SSY G +I + ++ D+S N +L A + G E+A +
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 262 LLLQKNCAP 270
+ +++C P
Sbjct: 513 EMEERDCKP 521
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 122/288 (42%), Gaps = 52/288 (18%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ Y+ + A ++++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ ++ PD ++Y+ + + A +D++K D++ + +W LV +
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW-----LVKTLV--- 565
Query: 145 HLVNAESSTLVEAEKSITQ-RQ-------------------------------------- 165
LVN++ + L EAEK+ + RQ
Sbjct: 566 -LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 624
Query: 166 ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
TY+ L+ +Y+ LG+ +K + I ++ + + +Y ++ +Y G +KE
Sbjct: 625 NLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 684
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + K S D+ N + ++ + E+A E ++ + C P
Sbjct: 685 LFSEMKCSGLKP-DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKP 731
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEKVALVVE 83
YTAL+ ++ A A +F R+ S + + YN ++ +Y M+V E V LV
Sbjct: 174 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K V PD +TYN IS C + + DEM SG D V + +L+++Y A
Sbjct: 234 -MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA-SGFEPDKVTFNSLLDVYGKA 291
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
A + E E+ +TY+ LI Y G
Sbjct: 292 RRHDEA-IEVIQEMERVGCPPSVVTYNSLISSYVKDG 327
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ TY +L+H+Y+ EK E + +K S + + YN ++ Y GQ+++ + +
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 83 EEIKRKNVVPDIFTYNLWISS 103
E+K + PD+ TYN+++ S
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKS 707
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ A A+ E+A EL ++++ ++ ++ GQV +V+E+
Sbjct: 47 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 106
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PDI YN+ I N+D KF E+ DD V Y +++ + A
Sbjct: 107 KGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDD-VSYTSMIWVLCKAGR 165
Query: 146 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L AE +EAE+S+ Y+ +I+ G G+ + + +K L +++ +
Sbjct: 166 LGEAEELFAQMEAERSVP--CAYAYNTMIM---GYGSAGRFEDAYKLLERLRERGCIPSV 220
Query: 205 ICILSSYLMLGHLKEVGEII 224
+ S LG ++V E +
Sbjct: 221 VSFNSILTCLGKKRKVDEAL 240
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY A++ A ++A LFE K + N ++Y+ ++ + VG++++ L++
Sbjct: 498 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 557
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 122
EE+ +K + P+++T+N + + I++ + + EM C
Sbjct: 558 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 600
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+Y+ L+H A + +F +KQ + +A YN ++ + G+V K ++EE
Sbjct: 430 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 489
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+K K V P + TY + A +D+ +E
Sbjct: 490 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 524
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 39/199 (19%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+++ + A +AEELF +++ A YN M+ Y S G+ E ++E +
Sbjct: 152 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 211
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD-----------------EMSCDSGGSD 128
+ + +P + ++N ++ +D+ + +M C G +
Sbjct: 212 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVE 271
Query: 129 DWVK----------YVNLVNIYITASHLVNAESSTLVEAEK---SITQR----QWITYDF 171
+ + + NL+ + I L A L EA K S +QR +TY
Sbjct: 272 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARK--LEEAYKIFESASQRGCNPDCVTYCS 329
Query: 172 LIILYAGLGNKDKIDQIWK 190
LI GLG K ++D+ ++
Sbjct: 330 LI---DGLGKKGQVDEAYR 345
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 11/255 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY ++ + E+A + + ++ ++L N L N M+ ++E+ + E
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ PD TY I +D+ + ++M D+G + + V Y +L+
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIR----- 367
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKIDQIWKSLRMTKQKM 199
+ ++ + K + +R L+ Y G +K I++ +R
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 427
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
R+Y ++ G +E I KQ + D A N ++ F G KA E
Sbjct: 428 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA-LDARAYNAVVDGFCKSGKVHKAYEI 486
Query: 260 HMLLLQKNCAPTNAS 274
+ +K PT A+
Sbjct: 487 LEEMKEKCVQPTVAT 501
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 82/204 (40%), Gaps = 8/204 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT+L+ + E ++F+ + + + + N M G+VEK ++ E+I
Sbjct: 361 VYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 420
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +PD+ +Y++ I + M G + D Y +V+ + +
Sbjct: 421 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK-QQGFALDARAYNAVVDGFCKSGK 479
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
V+ L E ++ Q TY ++ GL D++D+ + K K N
Sbjct: 480 -VHKAYEILEEMKEKCVQPTVATYGAIV---DGLAKIDRLDEAYMLFEEAKSKGIELNVV 535
Query: 204 -YICILSSYLMLGHLKEVGEIIDQ 226
Y ++ + +G + E I+++
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEE 559
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 2/201 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ Y K E+A ELF+ + + L+ N + +N ++ Y G++E+ L+ + +
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K +P+ TYN I +++VK L+EM C G D V Y L++ +
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC-RGVKADTVTYNILISAWCEKKE 493
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A +K + +TY+ L+ Y GN + K + + Y
Sbjct: 494 PKKAARLIDEMLDKGLKPSH-LTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYN 552
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
++ Y G L++ ++++
Sbjct: 553 VLIQGYCRKGKLEDANGLLNE 573
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/206 (17%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ S T+ L+ + + A ++FE ++ L + YN ++ + G++ + +
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+++E+ N+ P++ TYN I+ +++ ++ D + G + + + + L++ Y
Sbjct: 360 LLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG-KQGLTPNVITFNTLLHGY 418
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ A V EK TY+ LI+ + G +++ + ++ K
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNAS-TYNCLIVGFCREGKMEEVKNLLNEMQCRGVKAD 477
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQ 226
+ Y ++S++ K+ +ID+
Sbjct: 478 TVTYNILISAWCEKKEPKKAARLIDE 503
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 100/231 (43%), Gaps = 3/231 (1%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
KA+ + + + ++ +S N++ +N ++ + + V EE++ + + P + TYN +
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+ +++ K LDEM S + + Y L+N Y L A ++ +
Sbjct: 346 NGLCNEGKLNEAKVLLDEM-LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 404
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
T IT++ L+ Y G ++ + K + + Y C++ + G ++EV
Sbjct: 405 TP-NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
++++ Q D N L+ A+ + +KA +L K P++
Sbjct: 464 NLLNEM-QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSH 513
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 15/239 (6%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
E +++ + + +S N + +N ++ VG++ K VV+++K P++ TYN I
Sbjct: 214 VEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLID 273
Query: 103 SCAATLNIDQVKK---FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
+ ++ K L EM ++ S + V + L++ + +L +A E +
Sbjct: 274 GYCKMGRVGKMYKADAILKEM-VENKVSPNSVTFNVLIDGFCKDENL-SAALKVFEEMQS 331
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGH 216
+ +TY+ L+ GL N+ K+++ + + + K Y +++ Y
Sbjct: 332 QGLKPTVVTYNSLV---NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388
Query: 217 LKEVGEIIDQ-WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
L+E E+ D KQ T ++ N LL + G E+A ++L+K P NAS
Sbjct: 389 LEEARELFDNIGKQGLTP--NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLP-NAS 444
>gi|357153691|ref|XP_003576535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Brachypodium distachyon]
Length = 936
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P+S E Y +L+ Y A E+ + ++++++ F+ YN M+ +Y G +
Sbjct: 788 GFPVSL---EAYNCMLNAYGKAGQLEEFAAVLQKMRRAKCDFDHYTYNIMLNIYGRKGWI 844
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
E VA V+ E+K + V PD+++YN I + + K + EM G + D + Y N
Sbjct: 845 EGVAYVLSELKSRGVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRL-KGINADRITYTN 903
Query: 136 LV 137
L+
Sbjct: 904 LI 905
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 15 EGLPLSAKTSE------TYTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMT 67
E L L KTS Y+ ++ +Y A E A + E + KQ + + ++ +M+
Sbjct: 603 ETLYLELKTSACVLDMIAYSVIVRMYTKAGRPEDACSVLEDMEKQKEIVPDKYLFLDMLR 662
Query: 68 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 127
Y G +EK+ I + V D N I+ C + +D++ + DEM G
Sbjct: 663 TYQKCGLLEKLTDTYYWILKSQVECDEAMNNCIINCCGPAIPVDELTRIFDEM-IQLGHM 721
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
+ L++IY A L N A K Q I+Y+ +I YA G+ +
Sbjct: 722 ASTITLNVLLDIYGKAG-LFNRAQKVFNMARKQ-GQADIISYNTIIAAYAHSGDFRSMTY 779
Query: 188 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 247
+ ++ ++ Y C+L++Y G L+E ++ + ++ A DFD N +L +
Sbjct: 780 FVQKMQDAGFPVSLEAYNCMLNAYGKAGQLEEFAAVLQKMRR-AKCDFDHYTYNIMLNIY 838
Query: 248 SDVGLTE 254
G E
Sbjct: 839 GRKGWIE 845
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ++ YA + ++++ + + YN M+ Y GQ+E+ A V++++
Sbjct: 760 SYNTIIAAYAHSGDFRSMTYFVQKMQDAGFPVSLEAYNCMLNAYGKAGQLEEFAAVLQKM 819
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+R D +TYN+ ++ I+ V L E+ G D Y L+ Y A
Sbjct: 820 RRAKCDFDHYTYNIMLNIYGRKGWIEGVAYVLSELK-SRGVEPDLYSYNTLIKAYGIAG 877
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A++ +Y + K E++ +K+S ++ +A YN +M +Y +G EK ++ EIK
Sbjct: 598 AMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS 657
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
V PD ++YN I + + + + EM C SG D V Y V Y++ S
Sbjct: 658 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNS 712
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +LL +Y A+ ++A E+ + +++ + + YN +++ Y+ G +E+ + +E+
Sbjct: 280 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K + PD+ TY IS ID DEM +G + Y L+ + H
Sbjct: 340 EVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEM-VRNGCKPNLCTYNALIKM-----H 393
Query: 146 LVNAESSTLV----EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
V + ++ E + +T++ L+ ++ G ++ ++K ++
Sbjct: 394 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 453
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y+ ++SSY G +I + ++ D+S N +L A + G E+A +
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFA 512
Query: 262 LLLQKNCAP 270
+ +++C P
Sbjct: 513 EMEERDCKP 521
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 122/288 (42%), Gaps = 52/288 (18%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ Y+ + A ++++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 454 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 513
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ ++ PD ++Y+ + + A +D++K D++ + +W LV +
Sbjct: 514 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW-----LVKTLV--- 565
Query: 145 HLVNAESSTLVEAEKSITQ-RQ-------------------------------------- 165
LVN++ + L EAEK+ + RQ
Sbjct: 566 -LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 624
Query: 166 ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
TY+ L+ +Y+ LG+ +K + I ++ + + +Y ++ +Y G +KE
Sbjct: 625 NLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 684
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + K S D+ N + ++ + E+A E ++ + C P
Sbjct: 685 LFSEMKCSGLKP-DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKP 731
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEKVALVVE 83
YTAL+ ++ A A +F R+ S + + YN ++ +Y M+V E V LV
Sbjct: 174 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K V PD +TYN IS C + + DEM SG D V + +L+++Y A
Sbjct: 234 -MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA-SGFEPDKVTFNSLLDVYGKA 291
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
A + E E+ +TY+ LI Y G
Sbjct: 292 RRHDEA-IEVIQEMERVGCPPSVVTYNSLISSYVKDG 327
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ TY +L+H+Y+ EK E + +K S + + YN ++ Y GQ+++ + +
Sbjct: 627 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 686
Query: 83 EEIKRKNVVPDIFTYNLWISS 103
E+K + PD+ TYN+++ S
Sbjct: 687 SEMKCSGLKPDVVTYNIFVKS 707
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 11/258 (4%)
Query: 7 IHSGERYFEGLPLS---AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 63
+ S R+F+ + LS A TY L+ G ++A + ++ + NA+ YN
Sbjct: 138 LPSARRFFDSM-LSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYN 196
Query: 64 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
++ + G+V++ +V+ ++ + P++ T+N ++ ++ +K DEM
Sbjct: 197 TLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV-K 255
Query: 124 SGGSDDWVKYVNLVNIY--ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
G + D V Y LV Y + SH S E + +T+ LI + GN
Sbjct: 256 EGLAPDGVSYNTLVGGYCKVGCSH---EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGN 312
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
++ + + +R +M + ++ + G L + + + +Q + N
Sbjct: 313 LERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQP-SVVCYN 371
Query: 242 RLLGAFSDVGLTEKANEF 259
L+ + VG ++A E
Sbjct: 372 ALINGYCMVGRMDEAREL 389
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+L+H+ A E+A L +++ L N + + ++ + G ++ L V E+
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ + P + YN I+ +D+ ++ + EM G D V Y +++ Y
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEA-KGVKPDVVTYSTILSAY 412
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A++ +Y + K E++ +K+S ++ +A YN +M +Y +G EK ++ EIK
Sbjct: 580 AMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSS 639
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
V PD ++YN I + + + + EM C SG D V Y V Y++ S
Sbjct: 640 GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNS 694
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +LL +Y A+ ++A E+ + +++ + + YN +++ Y+ G +E+ + +E+
Sbjct: 262 TFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 321
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K + PD+ TY IS ID DEM +G + Y L+ + H
Sbjct: 322 EVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEM-VRNGCKPNLCTYNALIKM-----H 375
Query: 146 LVNAESSTLV----EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
V + ++ E + +T++ L+ ++ G ++ ++K ++
Sbjct: 376 GVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 435
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y+ ++SSY G +I + ++ D+S N +L A + G E+A +
Sbjct: 436 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYP-DVSTYNAVLSALARGGRWEQAEKLFA 494
Query: 262 LLLQKNCAP 270
+ +++C P
Sbjct: 495 EMEERDCKP 503
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 122/288 (42%), Gaps = 52/288 (18%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ Y+ + A ++++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 436 DTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAE 495
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ ++ PD ++Y+ + + A +D++K D++ + +W LV +
Sbjct: 496 MEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNW-----LVKTLV--- 547
Query: 145 HLVNAESSTLVEAEKSITQ-RQ-------------------------------------- 165
LVN++ + L EAEK+ + RQ
Sbjct: 548 -LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAI 606
Query: 166 ---WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
TY+ L+ +Y+ LG+ +K + I ++ + + +Y ++ +Y G +KE
Sbjct: 607 NLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASR 666
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + K S D+ N + ++ + E+A E ++ + C P
Sbjct: 667 LFSEMKCSGLKP-DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKP 713
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEKVALVVE 83
YTAL+ ++ A A +F R+ S + + YN ++ +Y M+V E V LV
Sbjct: 156 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 215
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K V PD +TYN IS C + + DEM SG D V + +L+++Y A
Sbjct: 216 -MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA-SGFEPDKVTFNSLLDVYGKA 273
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
A + E E+ +TY+ LI Y G
Sbjct: 274 RRHDEA-IEVIQEMERVGCPPSVVTYNSLISSYVKDG 309
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ TY +L+H+Y+ EK E + +K S + + YN ++ Y GQ+++ + +
Sbjct: 609 SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLF 668
Query: 83 EEIKRKNVVPDIFTYNLWISS 103
E+K + PD+ TYN+++ S
Sbjct: 669 SEMKCSGLKPDVVTYNIFVKS 689
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 12/250 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL ++ E+A +L + Q N + YN ++ +V + L++E++
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
N VPDI T+N I + T +D + + + +SG + + V Y +LV+ +
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ-ESGCTPNLVTYNSLVHGLCKSRR 480
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK-SLRMTKQKMTSRN- 203
AE K ITY+ +I GL ++D+ +K L+M + +
Sbjct: 481 FDQAEYLLREMTRKQGCSPDIITYNTVI---DGLCKSKRVDRAYKLFLQMLSDGLAPDDV 537
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKANEFH 260
Y ++SS + E +++ ++ FD A L+ F G +KA E
Sbjct: 538 TYSIVISSLCKWRFMDEANNVLELMLKNG---FDPGAITYGTLIDGFCKTGNLDKALEIL 594
Query: 261 MLLLQKNCAP 270
LLL K P
Sbjct: 595 QLLLSKGSYP 604
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 6/251 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ++ + A ELF +++S + N + YN ++ + ++ ++ E+
Sbjct: 432 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 491
Query: 86 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
RK PDI TYN I + +D+ K +M D DD V Y ++V +
Sbjct: 492 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD-VTY-SIVISSLCKW 549
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
++ ++ L K+ ITY LI + GN DK +I + L ++K
Sbjct: 550 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQ-LLLSKGSYPDVVT 608
Query: 205 ICILSSYL-MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
I +L G L++ GE+++ ++ D N LL F D TE A + ++
Sbjct: 609 FSIFIDWLSKRGRLRQAGELLETMLRAGLVP-DTVTYNTLLKGFCDASRTEDAVDLFEVM 667
Query: 264 LQKNCAPTNAS 274
Q C P NA+
Sbjct: 668 RQCGCEPDNAT 678
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 4/250 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + + A EL ++ + NA+ YN +M S +++ + +E+
Sbjct: 151 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM 210
Query: 86 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + PD+FTY+ + S + +D + ++ M G S + V Y +L++ A
Sbjct: 211 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMV-SKGCSPNVVTYSSLLHGLCKAG 269
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A ++ L +S +TY+ +I + LG D+ + + + + Y
Sbjct: 270 KLDEA-TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 328
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+L ++ G ++ +++ + ++ N LL F E+A + ++
Sbjct: 329 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVP-NLFTYNSLLDMFCKKDEVERACQLLSSMI 387
Query: 265 QKNCAPTNAS 274
QK C P S
Sbjct: 388 QKGCVPNVVS 397
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 110/276 (39%), Gaps = 16/276 (5%)
Query: 6 GIHSGERYFEGLPLSAKTSE---------TYTALLHLYAGAKWTEKAEELFERVKQSNLS 56
G+ SG + L L + E TY+ ++ + + A L E + S
Sbjct: 193 GLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCS 252
Query: 57 FNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 116
N + Y+ ++ G++++ +++ + R P+I TYN I ID+
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312
Query: 117 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 176
L+EM D G + V Y L++ + +A V EK + TY+ L+ ++
Sbjct: 313 LEEMV-DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF-TYNSLLDMF 370
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF- 235
KD++++ + L QK N + + L +V E + +Q +++
Sbjct: 371 C---KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV 427
Query: 236 -DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
DI N ++ A + A E L+ + C P
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 463
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 107/255 (41%), Gaps = 18/255 (7%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +++ + + + A L E + + + N YN ++ + +VE ++E
Sbjct: 44 SVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLE 103
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ + PD+ +Y I+ +D+ + +D+M G + + Y LV+ +
Sbjct: 104 QMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI-QRGCQPNVITYGTLVDGFCRV 162
Query: 144 SHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKID---QIWKSLRMTK 196
L A VE + +T+R + ITY+ ++ GL + K+D Q++K + +
Sbjct: 163 GDLDGA-----VELVRKMTERGYRPNAITYNNIM---HGLCSGRKLDSALQLFKEMEESG 214
Query: 197 QKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
Y I+ S + G + + +++ S ++ + LL G ++
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP-NVVTYSSLLHGLCKAGKLDE 273
Query: 256 ANEFHMLLLQKNCAP 270
A + + C+P
Sbjct: 274 ATALLQRMTRSGCSP 288
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
++L A T +A +L ++ + +S + +MYN + + + Q+ + + E++K+
Sbjct: 423 SMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQD 482
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
+PD FTYN+ ISS +D+ K +E+ DS D Y +L+N HL
Sbjct: 483 GPLPDTFTYNILISSFGRAGKVDEAIKIFEELE-DSDYKPDTCSYNSLINCLGKNGHLDE 541
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
A EK + +TY LI + K D++ + R+ + + Y I+
Sbjct: 542 AHMKFKEMCEKGLNP-DVVTYSTLIECFG------KTDKVEMACRLFDEMLAEGCYPNIV 594
Query: 209 SSYLMLGHLKEVG---EIIDQWKQ 229
+ ++L L+ G E +D + +
Sbjct: 595 TYNILLDCLERSGRTAEAVDLYAK 618
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 8/235 (3%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY L+ Y ++ TEK ++ +K+ + +N ++ + +V+ V
Sbjct: 210 TGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVF 269
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E++KRK+ PD +TY + I D+ + +EM + G S + + Y ++
Sbjct: 270 EDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEM-LNKGYSPNVIAYNTMIQALAN 328
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
A + A L EK ++ TY ++ L A K+D++ + ++K+ M+
Sbjct: 329 ARMVDKAILLFLKMVEKECRPSEF-TYSVILHLLATERKLHKLDEV---VEVSKKYMSRS 384
Query: 203 NYICILSSYLMLGHLKEVGEII-DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y ++ + LGH E + + W D D AC +L G T +A
Sbjct: 385 IYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRD--ACVSMLECLCSAGKTTEA 437
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y + K +L+E++KQ + YN +++ + G+V++ + EE++
Sbjct: 456 YNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELE 515
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ PD +YN I+ ++D+ EM C+ G + D V Y L+ +
Sbjct: 516 DSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEM-CEKGLNPDVVTYSTLIECF 568
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + A ++A ++FE ++ S+ + YN ++ G +++ + +E+
Sbjct: 490 TYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEM 549
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K + PD+ TY+ I T ++ + DEM
Sbjct: 550 CEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEM 584
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 110/278 (39%), Gaps = 36/278 (12%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+TAL+ A + A EL + +K+ + + YN ++ + VG + + +++E+
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 138
KR PD+ TY+ I+ +D+ + L +M G D + Y L+N
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKME-KEGCPPDTITYNTLINGLGKAGL 339
Query: 139 ------------------IYITASHLVNA-------ESSTLV--EAEKSITQRQWITYDF 171
+T S L+ A ES+ ++ E E Q TY
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399
Query: 172 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
+I + G D D+++ +R Y L+S G KE +I + K+S
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 269
D++ + LL S + A L+++ CA
Sbjct: 460 LLP-DVATYDALLLGLSKTKEVDDACGLLKELIEQGCA 496
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ A +A LF +++ + YN ++ VG+ +K ++EE+
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R PD+ TY+ I+ + K EM G D + + L++ A
Sbjct: 176 ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK-RRGRKPDSITFTALMDALGKAGR 234
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A L E ++ + +TY+ LI + +G+ + + ++ K Y
Sbjct: 235 VDDA-LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
C+++ + L E +++ + ++ D N L+ GL A +
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPP-DTITYNTLINGLGKAGLLNDAGRLFDRMKS 352
Query: 266 KNCAP 270
K C P
Sbjct: 353 KGCNP 357
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L++ ++KA EL E +++ + + Y+ ++T G+ K + +E+
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR+ PD T+ + + +D + LDEM + G V Y L+ +
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK-ERGVKPGVVTYNALIAGFGKVGD 269
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV A + L E +++ + +TY LI D+ Q+ K + + Y
Sbjct: 270 LVEA-YNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYN 328
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+++ G L + G + D+ K S + D+ + L+ A E A
Sbjct: 329 TLINGLGKAGLLNDAGRLFDRMK-SKGCNPDVVTYSTLITALGKAARVESA 378
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 36/279 (12%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL+ A A E+A+ LFE +K + + + + Y+ ++ G+ E VV E+
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K P+++TYN + D+ + L EM D+G D Y L++ A
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR-DNGCVPDVRTYNCLISTLGKAGR 129
Query: 146 LVNAES----------------------------------STLVEAEKSITQRQWITYDF 171
L A + L E E+ +TY
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 172 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
LI G K ++++ ++ +K S + ++ + G + + E++D+ K+
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ N L+ F VG +A + + C P
Sbjct: 250 VKP-GVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ + A + A+ LF ++ LS + + YN + G+ ++ + E++
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
K ++PD+ TY+ + + T +D L E+ + G + D +K+ + I
Sbjct: 456 KESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL-IEQGCAFDSLKFDECLEI 508
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 77/215 (35%), Gaps = 38/215 (17%)
Query: 56 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
S N + YN ++ GQ E+ L+ EE+K PD+ +Y+ I+S
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSL----------- 54
Query: 116 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 175
G + W + +V AE K W TY+ L+
Sbjct: 55 ---------GRAGKWEAALEVV-----------AEMQA-----KGCKPNLW-TYNTLVDC 88
Query: 176 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
G D+ ++ +R R Y C++S+ G L E + + ++
Sbjct: 89 LGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP- 147
Query: 236 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
D N L+ VG ++KA E + + C P
Sbjct: 148 DTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
++A EL + L A YN ++ G+V + +E++K + PDI +Y+
Sbjct: 516 DEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSL 575
Query: 101 ISSCAATLNIDQVKKFLDEMS 121
IS+ T ID + L+EMS
Sbjct: 576 ISALGQTGQIDTAFELLEEMS 596
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 85
YT +LH Y+ EKA LFER+K+ S + YN ++ ++ +G+ K+ V+EE+
Sbjct: 220 YTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEM 279
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITAS 144
+ K + D FT + +S+CA + + K F E+ SC G V Y L+ ++ A
Sbjct: 280 RSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSC--GYEPGTVTYNALLQVFGKAG 337
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
A S L E E++ +TY+ L+ YA G
Sbjct: 338 VYTEA-LSVLKEMEENNCPADSVTYNELVAAYARAG 372
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL ++ A +A + + ++++N +++ YNE++ Y G ++ A+V+E +
Sbjct: 325 TYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMM 384
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+K V+P+ TY I + D+ K M
Sbjct: 385 TQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 419
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 52/96 (54%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ +Y KAEE+ + +++S L + + YN ++ + G +++ ++ E+
Sbjct: 675 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEM 734
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+ + P IFTYN ++S A +++ ++ M+
Sbjct: 735 TERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMA 770
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 49/95 (51%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L ++ ++AE + + + + L+ + + YN +M +Y+ G+ K +++ ++
Sbjct: 641 FNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE 700
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+ + PD+ +YN I + + + L EM+
Sbjct: 701 KSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMT 735
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 85/222 (38%), Gaps = 35/222 (15%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY L+ YA A ++++A + E + Q + NA+ Y ++ Y G+ ++ +
Sbjct: 358 SVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFY 417
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----------------CDSGG 126
+K VP+ TYN +S +++ K L +M C + G
Sbjct: 418 SMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKG 477
Query: 127 SDDWVKYV-------------NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
D +V V + N I+A +E V+A K + ++ +
Sbjct: 478 MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE----VDASKMYGEMTRAGFNACV 533
Query: 174 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY-LML 214
Y L N W+S M S+ + +SY LML
Sbjct: 534 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 575
>gi|449523950|ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 191
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 11 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
E YF +P K + + ALL+ YA K+ +KA + +++K+ + +L YN M LY
Sbjct: 84 EDYFNNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYH 143
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+G+ E++ +K +V D FTY +S+ A + ++K +++M
Sbjct: 144 QIGEFERLD---SPLKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQM 190
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P SA YT L+ A A+ E+A EL +++ + ++ ++ GQ+E
Sbjct: 175 PFSA-----YTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEP 229
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+V+E+K + PDI YN+ I ++D KF E+ DD V Y ++V
Sbjct: 230 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDD-VSYTSMV 288
Query: 138 NIYITASHLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
+ A L AE +EAE+ + Y+ +I+ G G+ ++ D +K L +
Sbjct: 289 WVLCKAGRLGEAEELFGQMEAERDVP--CAYAYNTMIM---GYGSAERFDDAYKLLERLR 343
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGE---IIDQWKQSATSD 234
++ + + S LG ++V E + D K+ A +
Sbjct: 344 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPN 384
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L+
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 122
+EE+ +K + P+++T+N + + T ID+ + + EM C
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKC 731
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+Y+ L+H A + +F+ + Q + +A YN ++ G+V+K V+EE
Sbjct: 561 RSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEE 620
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+K K+V P + TY + A +D+ +E
Sbjct: 621 MKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE 655
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 105/269 (39%), Gaps = 43/269 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+++ + A +AEELF +++ A YN M+ Y S + + ++E +
Sbjct: 283 SYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERL 342
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD-----------------EMSCDSGGSD 128
+ + +P + ++N ++ +D+ D +M C +G +
Sbjct: 343 RERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVN 402
Query: 129 DWVK----------YVNLVNIYITASHLVNAESSTLVEAEK---SITQR----QWITYDF 171
+ K + NL+++ I L A + L EA + S ++R +TY
Sbjct: 403 EAYKIRDEMELAGLFPNLLSVNIMVDRLCKA--NQLEEAHRIFESASERGCNPNSVTYCS 460
Query: 172 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWK 228
LI GLG K KID ++ N Y ++ ++ M G KE G I +
Sbjct: 461 LI---DGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGR-KEDGHKIYKEM 516
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKAN 257
D++ N + G EK
Sbjct: 517 IRRGGRPDLTLLNTYMDCVFKAGEVEKGR 545
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 107/239 (44%), Gaps = 3/239 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P + S TY L+ LY A +A E+F + ++ ++ + +N M+ + S G + +
Sbjct: 265 PQKPRLSNTYNVLIDLYGKAGRLSEAAEVFAEMLKAGVAVDVWTFNTMIFVCGSQGDLAE 324
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
++ ++ K V PD T+N+++S A +I + ++G D V Y L+
Sbjct: 325 AEALLGMMEEKGVAPDTKTFNIFLSLYAEARDIGAAVLCYKRIR-EAGLCPDEVTYRALL 383
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ + ++V + E E++ ++ +Y G G+ DK + K ++ +
Sbjct: 384 GV-LCRKNMVREVEDLIDEMERAFVSVDEHCVPGIVEMYVGEGDVDKAFDLLKKFQVNGE 442
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
M+S I+ + G +E ++ + + A D+ CN ++ A+ L +KA
Sbjct: 443 -MSSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAYGKAKLYDKA 500
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+S +A++ ++A E+AE++F R + + + L N M+ Y +K +
Sbjct: 444 SSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAYGKAKLYDKAISL 503
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ +K P+ TYN + + +DQ +DEM + G + ++ Y
Sbjct: 504 FKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMDLVDEMQ-EVGFKPPCQTFSAVIGCYA 562
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L +A S E ++ + + Y LI G +++ K M ++ S
Sbjct: 563 RLGQLSDA-VSVFKEMVRTGVKPNEVVYGSLI---NGFAEHGSLEEALKYFHMMEESGLS 618
Query: 202 RNYIC---ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
N + +L SY +G+L+ I ++ K + D+ ACN ++G F+D+GL +A
Sbjct: 619 SNLVVLTSLLKSYCKVGNLEGAKAIYERMK-NMEGGLDLVACNSMIGLFADLGLVSEA 675
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 96/234 (41%), Gaps = 34/234 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ + +GA ++A +L + +++ ++ ++ Y +GQ+ V +E+
Sbjct: 518 TYNSLVQMLSGADLVDQAMDLVDEMQEVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEM 577
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R V P+ Y I+ A ++++ K+ M +SG S + V +L+ Y +
Sbjct: 578 VRTGVKPNEVVYGSLINGFAEHGSLEEALKYFHMME-ESGLSSNLVVLTSLLKSYCKVGN 636
Query: 146 LVNA---------------------------------ESSTLVEAEKSITQRQWITYDFL 172
L A E+ E + + + I+Y +
Sbjct: 637 LEGAKAIYERMKNMEGGLDLVACNSMIGLFADLGLVSEAKLAFENLREMGRADAISYATI 696
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
+ LY G+G D+ +I + ++++ +Y +L Y G E GE+I +
Sbjct: 697 MYLYKGVGLIDEAIEIAEEMKLSGLLRDCVSYNKVLVCYAANGQFYECGELIHE 750
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y +++LY G ++A E+ E +K S L + + YN+++ Y + GQ + ++ E+
Sbjct: 692 SYATIMYLYKGVGLIDEAIEIAEEMKLSGLLRDCVSYNKVLVCYAANGQFYECGELIHEM 751
Query: 86 KRKNVVPDIFTYNLWIS----SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY- 140
+ ++P+ T+ + + T + Q++ E + + +Y
Sbjct: 752 ISQKLLPNDGTFKVLFTILKKGGIPTEAVAQLESSYQE-------GKPYARQTTFTALYS 804
Query: 141 ITASHLVNAESS-TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ H + ES+ T +E+E + ++ I Y G+ +K I+ +R
Sbjct: 805 LVGMHNLALESAQTFIESEVDLDSS---AFNVAIYAYGSAGDINKALNIYMKMRDEHLGP 861
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQ 226
YI ++ Y G ++ V +I Q
Sbjct: 862 DLVTYIYLVGCYGKAGMVEGVKQIYSQ 888
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 4/246 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEE 84
+YTAL++ Y E + EL ER+K+ +S + L YN ++ G E + + E
Sbjct: 180 SYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAE 239
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + + PDI TYN + +C+ D+ + M+ + G D Y LV+ + +
Sbjct: 240 MRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMN-EGGVVPDITTYTYLVDTFGKLN 298
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L + S L E + + +Y+ L+ YA +GN + +++ ++ + Y
Sbjct: 299 RL-DKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETY 357
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+L Y G EV E+ + K S T D + N L+ F + G ++ +
Sbjct: 358 SILLGLYGKHGRYDEVRELFLEMKVSNTEP-DAATYNTLIDVFGEGGYFKEVVTLFHDMA 416
Query: 265 QKNCAP 270
++N P
Sbjct: 417 EENVEP 422
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 37/244 (15%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ L EK ++FE + +S + Y ++ Y G+ E ++E +K
Sbjct: 146 YTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMK 205
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
++ V P I TYN I+SCA G DW + L
Sbjct: 206 KERVSPSILTYNTVINSCAR-------------------GGLDWEGLLGL---------- 236
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
E Q +TY+ L+ + G D+ + +++++ Y
Sbjct: 237 -------FAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTY 289
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ ++ L L +V E++ + + +IS+ N LL A++ +G E A L+ +
Sbjct: 290 LVDTFGKLNRLDKVSELLKEMASTGNVP-EISSYNVLLEAYARIGNIEDATGVFRLMQEA 348
Query: 267 NCAP 270
C P
Sbjct: 349 GCVP 352
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ETY+ LL LY ++ ELF +K SN +A YN ++ ++ G ++V +
Sbjct: 354 AETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFH 413
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ +NV P++ TY I +C D KK L MS + G Y ++ Y A
Sbjct: 414 DMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMS-EKGMIPSSKAYTGVIEAYGQA 472
Query: 144 S----HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ LV + + ++ +I TY+ LI ++A G
Sbjct: 473 AMYEEALVTLNTMNEMGSKPTIE-----TYNTLIYMFARGG 508
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 10/190 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + +K EL + + + YN ++ Y +G +E V +
Sbjct: 286 TYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ VP+ TY++ + D+V++ EM S D Y L++++ +
Sbjct: 346 QEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKV-SNTEPDAATYNTLIDVFGEGGY 404
Query: 146 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TS 201
E TL AE+++ + TY+ LI G D +I L M+++ M +S
Sbjct: 405 F--KEVVTLFHDMAEENV-EPNMETYEGLIFACGKGGLHDDAKKIL--LHMSEKGMIPSS 459
Query: 202 RNYICILSSY 211
+ Y ++ +Y
Sbjct: 460 KAYTGVIEAY 469
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 5/173 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ A ++A F+ + + L+ N YN +M + VGQ++ + E+
Sbjct: 137 TYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM 196
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR+ P + TYN+ + + + + +K +M+ D G S D Y LVN + S
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD-GCSPDSYTYSTLVN-GLGKSG 254
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
V E + Y+ L+ A GN +D++WK ++ +K
Sbjct: 255 RVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGN---MDRVWKLMKEMSRK 304
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 109/288 (37%), Gaps = 44/288 (15%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T +T L+ + + E+AE +++++ Q + YN ++ + GQ++
Sbjct: 62 SPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAME 121
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ E+K K PD +TY +++ + + + F D M + G + + Y L++ +
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM-LERGLTPNIPTYNLLMDAF 180
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLI--------------------------- 173
L + E ++ Q +TY+ L+
Sbjct: 181 RKVGQL-DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPD 239
Query: 174 -----ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY-LMLGHLKEVGEIIDQW 227
L GLG ++++ K R +M R L +Y +L L + G + W
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFR----EMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295
Query: 228 ---KQSATSDF--DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
K+ + F D + N ++ A + A E +++ C P
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP 343
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY+ L++ + E+A ++F + ++ + + YN ++ G +++V +++
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMK 299
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+ RK PD F++N + + D ++ M +SG D + Y L++ Y
Sbjct: 300 EMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM-VESGCKPDLISYNILIDSY 355
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++TY +L+H A ++A + E ++ + + + YN +M + G+ ++ A + +
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQ 439
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++K K V PD +Y + I A +D+ +M G D Y I I A
Sbjct: 440 QMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKA-VGCPVDKAMY----RILIRA 494
Query: 144 SH 145
+H
Sbjct: 495 AH 496
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 38/246 (15%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ + ALL LY+ AEEL + +K++ L + +YN M++LY +G K ALV +
Sbjct: 776 QVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKG 835
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ PD T+N I + + + + L EM +K N NI
Sbjct: 836 MQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREM----------IKTGNAPNIS---- 881
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
TY LI Y L + + ++KS+ T K + Y
Sbjct: 882 -----------------------TYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAY 918
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+++ Y G +++ E+I+Q K + ++ + L+ ++ G T KA E L
Sbjct: 919 NVMINVYRKAGEHRKIEEVIEQMKADGF-EPSLTTIHMLMDSYGKGGATGKAEEVLETLP 977
Query: 265 QKNCAP 270
+ +P
Sbjct: 978 EIGMSP 983
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 79
+A TYT L+ Y + E AE +F+ + ++ +A YN M+ +Y G+ K+
Sbjct: 876 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 935
Query: 80 LVVEEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
V+E++K P + T ++ + S AT ++V + L E+ G S D + Y ++
Sbjct: 936 EVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEI----GMSPDAIHYTSI 991
Query: 137 VNIYITASHLVNAE 150
+N SHL N +
Sbjct: 992 IN-----SHLNNKD 1000
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 15/260 (5%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A +L + A A+ELF+R +S++ +YN +M++Y G V
Sbjct: 77 APNPRMLAVMLSVLGRANQPGLAQELFDRA-ESSIGNCVQVYNSLMSVYARHGDWNSVQQ 135
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ ++ + PD+ T+N+ I + + + L + +G D + Y N
Sbjct: 136 LLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITY----NTL 191
Query: 141 ITASHLVNAESSTLVEAEKSITQRQ------WITYDFLIILYAGLGNKDKIDQIWKSLRM 194
I+A L N S ++ E+ QRQ W TY+ +I +Y G + I++ ++
Sbjct: 192 ISACSLNNRLSDAILIFEE--MQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQE 248
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
+ Y +L ++ G ++EV I + + S +I+ N ++ + G+
Sbjct: 249 QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY-NTMIHMYGKAGMHR 307
Query: 255 KANEFHMLLLQKNCAPTNAS 274
KA E ++ + ++ P + +
Sbjct: 308 KAEELYVQMKEEGRCPDSVT 327
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/228 (17%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A L + V + L + + YN +++ ++ L+ EE++R+ PDI+TYN IS
Sbjct: 169 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMIS 228
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
++ M + G + D V Y ++++ + + E + + +
Sbjct: 229 VYGRAGRVEAASSIFRIMQ-EQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 287
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
+ ITY+ +I +Y G K ++++ ++ + S + ++ + G + E
Sbjct: 288 SDE-ITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAA 346
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + +S + A + ++ A++ + A + +L+ P
Sbjct: 347 MFEDMLKSQVRP-TLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRP 393
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 43/250 (17%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + Y+ALL YA E+A + + + L NA N ++ + G+ ++++
Sbjct: 667 AGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSE 726
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + + P+ T+ + + + N+++ + +M ++G S + L+ +Y
Sbjct: 727 FYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMR-EAGFSPSIQVFKALLALY 785
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ ++AE + + +K+ + Y+ +I LY+ LG+ K ++K ++
Sbjct: 786 SRETVEIDAE-ELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPD 844
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ + ++ Y ++E ++ + ++ + +IS L+ A+ + E A
Sbjct: 845 ATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP-NISTYTTLISAYGRLQAYEDAELVF 903
Query: 261 MLLLQKNCAP 270
+ + C P
Sbjct: 904 KSIAETGCKP 913
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ +Y A E A +F +++ + +A+ YN ++ + G++E+V + +
Sbjct: 222 TYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMM 281
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ D TYN I + ++ +M + G D V + L++ + +
Sbjct: 282 RDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK-EEGRCPDSVTFTVLIDT-LGKAG 339
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
VN ++ + KS + + +I YA
Sbjct: 340 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYA 371
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++H+Y A KAEEL+ ++K+ +++ + ++ G V + A + E++
Sbjct: 292 TYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDM 351
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC--DSGGSDDWVKYVNLVNIYITA 143
+ V P + ++ I + A D SC +G D + Y +++++ A
Sbjct: 352 LKSQVRPTLQAFSAMICAYA---KADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKA 408
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 9/234 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +LL + + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 298 TFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEM 357
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KN++P++ TY+ I A +D +EM G D V Y L+++Y
Sbjct: 358 PTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDR-VSYNTLLSVYAKLGR 416
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
A E E + ++ +TY+ L+ AG G + + D++ + K+ S N
Sbjct: 417 FEQA-LDVCKEMENAGIRKDVVTYNALL---AGYGKQYRYDEVRRVFEEMKRGRVSPNLL 472
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y ++ Y G KE E+ ++KQ+ D+ + L+ A GL E +
Sbjct: 473 TYSTLIDVYSKGGLYKEAMEVFREFKQAGLKA-DVVLYSALIDALCKNGLVESS 525
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ +Y+ ++A E+F KQ+ L + ++Y+ ++ G VE +++E+
Sbjct: 473 TYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEM 532
Query: 86 KRKNVVPDIFTYNLWISS 103
++ + P++ TYN I +
Sbjct: 533 TKEGIRPNVVTYNSIIDA 550
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL Y ++ +FE +K+ +S N L Y+ ++ +Y G ++ V E
Sbjct: 438 TYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREF 497
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
K+ + D+ Y+ I + ++ LDEM+ G + V Y ++++ +
Sbjct: 498 KQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMT-KEGIRPNVVTYNSIIDAF 551
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ++++ A E A ++F+ + + L+ + + YN +++ Y VG + + V E+
Sbjct: 83 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 142
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ +VPD+ T+ I + N++Q + +M + G + V + L++ +
Sbjct: 143 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGF 201
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A + + E K Q + Y+ LI Y LG D ++ + + + K Y
Sbjct: 202 LDDALLA-VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 260
Query: 206 CILSSYLMLGHL 217
I+S Y +G+L
Sbjct: 261 TIISGYCKVGNL 272
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 106/251 (42%), Gaps = 4/251 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVA 79
A + TY L+ + A + AE + +++ N N + +N M+ G++E
Sbjct: 42 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 101
Query: 80 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
V +E+ R+ + PD+ +YN +S + + EM+ G D V + +L++
Sbjct: 102 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT-QRGLVPDVVTFTSLIHA 160
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
A +L A + E+ + + +T+ LI + G D + +R +
Sbjct: 161 TCKAGNLEQAVALVAQMRERGLRMNE-VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 219
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ Y +++ Y LG + E+I + + D+ + ++ + VG + A +
Sbjct: 220 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISGYCKVGNLDSAFQL 278
Query: 260 HMLLLQKNCAP 270
+ +L+K P
Sbjct: 279 NQKMLKKGVLP 289
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 12/239 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ E+A + ++ + + NA+ YN ++ + G+++ VV +
Sbjct: 12 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 71
Query: 86 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + N P++ T+N ++ ++ +K DEM G + D V Y L++ Y
Sbjct: 72 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV-REGLAPDVVSYNTLLSGYCKVG 130
Query: 145 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L S V +E +TQR +T+ LI GN ++ + +R +M
Sbjct: 131 CL---HESLAVFSE--MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 185
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ ++ + G L + +++ ++ + N L+ + +G + A E
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVCYNALINGYCKLGRMDLAREL 243
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+ K A ELFE + Q + + Y ++ + G VEK + +E+
Sbjct: 293 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
RK V+PD+ TY++ I+ + + + + L
Sbjct: 353 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 384
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 70/170 (41%), Gaps = 2/170 (1%)
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R V P+++TYN+ + + A +++ + +M +G + + V Y LV + A L
Sbjct: 3 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR-GAGCAPNAVTYNTLVAAFCRAGEL 61
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE + E+ + +T++ ++ G + +++ + +Y
Sbjct: 62 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 121
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+LS Y +G L E + + Q D+ L+ A G E+A
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVP-DVVTFTSLIHATCKAGNLEQA 170
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A++ +Y K +K EE+ +K+++++ +A YN +M +Y +G EK ++ EIK
Sbjct: 611 AMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSS 670
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ PD ++YN I + + + + EM C SG D V Y + Y+
Sbjct: 671 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC-SGVKPDIVTYNIFIKSYV 722
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 114/253 (45%), Gaps = 11/253 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +LL +Y A+ E+A + ++++ + + + + YN +++ Y+ G +E+ + +E+
Sbjct: 293 TFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEM 352
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + PD+ TY IS ID EM +G S + Y L+ + H
Sbjct: 353 EFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEM-VRNGCSPNLCTYNALIKM-----H 406
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
V + + ++ + + +T++ L+ ++ G ++ ++K ++
Sbjct: 407 GVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPER 466
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y+ ++SSY G + EI + ++ DIS N +L A + G +A +
Sbjct: 467 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYP-DISTYNAVLSALARGGRWVQAEKLFA 525
Query: 262 LLLQKNCAPTNAS 274
+ ++C P S
Sbjct: 526 EMEDRDCKPDELS 538
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ TY +L+H+Y+ EK E + +K S + + YN ++ Y GQ+++ + +
Sbjct: 640 SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 699
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATL----NIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
E+K V PDI TYN++I S A L ID V+ + + G + Y +++
Sbjct: 700 SEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQ-----GCKPNERTYNSILE 754
Query: 139 IYITASHLVNAES 151
Y +V A+S
Sbjct: 755 GYCRHGRMVEAKS 767
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY A+L A G +W + AE+LF ++ + + L Y+ ++ Y + +++K+ + E+
Sbjct: 503 TYNAVLSALARGGRWVQ-AEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSED 561
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITA 143
I + + P + + ++ + +K E+ D + +N +V+IY
Sbjct: 562 IYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLD--INVLNAMVSIYGKN 619
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ E + E SI TY+ L+ +Y+ LG+ +K + I ++ + + +
Sbjct: 620 KMVKKVEEVLTLMKENSINH-SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYS 678
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y ++ +Y G +KE + + K S DI N + ++ + E+A + L
Sbjct: 679 YNTVIYAYGRKGQMKEASRLFSEMKCSGVKP-DIVTYNIFIKSYVANLMFEEAIDLVRYL 737
Query: 264 LQKNCAP 270
+ + C P
Sbjct: 738 VAQGCKP 744
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 5/200 (2%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY--MSVGQVEK 77
A + YTAL+ ++ A A +F R+ + + YN ++ +Y MSV E
Sbjct: 181 PAPDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKE- 239
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
V ++V+ +K + D +TYN IS C + + DEM +G D V + +L+
Sbjct: 240 VVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKA-AGFEPDKVTFNSLL 298
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
++Y A A L + E + +TY+ LI Y G ++ ++ + +
Sbjct: 299 DVYGKARRHEEA-IGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 357
Query: 198 KMTSRNYICILSSYLMLGHL 217
K Y ++S +G +
Sbjct: 358 KPDVVTYTTLISGLDRIGKI 377
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 11/282 (3%)
Query: 1 MTKVFGI-HSGER---YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 54
M K +GI S E+ FE + T + TY L+ + A A K E+++++
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 55 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 114
+ + Y +++ ++ +GQ+ V +E+ N+ PD+ Y + I++ A T N+ Q
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 115 KFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDFL 172
+++ M ++G + V Y +L+ +Y +L AE+ L+++ T + +
Sbjct: 631 SYVEAMK-EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCM 689
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
I LY+ K + I+ S++ + + + +L Y G +E +I Q ++
Sbjct: 690 INLYSERSMVRKAEAIFDSMKQ-RGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKI 748
Query: 233 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+S N +LG F+ G ++A E ++ P +++
Sbjct: 749 LTDPLSY-NSVLGLFALDGRFKEAVETFKEMVSSGIQPDDST 789
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S TY ++ Y + ++A E F+R+ + + + +N M+ +Y + GQ+ +V ++
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ +K + PD TYN+ IS +I++ + EM D G D V Y L+ + +
Sbjct: 357 KTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMK-DDGLKPDPVSYRTLLYAF-S 413
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM--TKQKMT 200
H+V + E + + T L +Y + +++ W + M+
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYV---EAEMLEKSWSWFKRFHVAGNMS 470
Query: 201 SRNYICILSSYLMLGHLKEVGEI 223
S Y + +Y G+L E +
Sbjct: 471 SEGYSANIDAYGERGYLSEAERV 493
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 30 LLHLYAGAKWTEKAEELF------ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+L +Y A+ +KAEE F E S++ ++ YN M+ Y GQ+++ + +
Sbjct: 263 VLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFK 322
Query: 84 EIKRKNVVPDIFTYNLWI 101
+ + +VP T+N I
Sbjct: 323 RMLEEGIVPTTVTFNTMI 340
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL++ +A EKAEE+FE++++ L + +YN +M Y G A + +
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 86 KRKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ PD +YN+ + + A L+ D F +EM G + ++ L++ Y A
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF-EEMK-RLGIAPTMKSHMLLLSAYSKAR 440
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ E+ +E + ++ + ++ LY LG K+++I + Y
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVL-NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 499
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+++ Y G L+ + E+ + K+ D+ +GA+S L K E ++
Sbjct: 500 NILINIYGKAGFLERIEELFVELKEKNFRP-DVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 265 QKNCAPTNASG 275
CAP +
Sbjct: 559 DSGCAPDGGTA 569
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ETY +++LY A + + +L+ ++ N Y ++ + G EK +
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 83 EEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
E+++ + PD++ YN + S ++ + M C+ D Y +V+
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP----DRASYNIMVDA 400
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
Y A +AE + E ++ ++ L+ Y+ + K + I K M++ +
Sbjct: 401 YGRAGLHSDAE-AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE--MSENGV 457
Query: 200 TSRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
++ +L+ Y LG ++ +I+ + + + DIS N L+ + G E+
Sbjct: 458 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINIYGKAGFLERIE 516
Query: 258 EFHMLLLQKNCAP 270
E + L +KN P
Sbjct: 517 ELFVELKEKNFRP 529
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
E P +A S TY L+++Y A + E+ EELF +K+ N + + + + Y
Sbjct: 488 ENGPCTADIS-TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 546
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K V EE+ PD T + +S+C++ ++QV L M
Sbjct: 547 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 6 GIHS-GERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
G+HS E FE + A T +++ LL Y+ A+ K E + + + ++ + + +
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N M+ LY +GQ K+ ++ E++ DI TYN+ I+ ++++++ E+
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ A A+ E+A EL ++++ ++ ++ GQV +V+E+
Sbjct: 181 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 240
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PDI YN+ I N+D KF E+ DD V Y +++ + A
Sbjct: 241 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDD-VSYTSMIWVLCKAGR 299
Query: 146 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L AE +EAE+S+ Y+ +I+ G G+ + + +K L +++ +
Sbjct: 300 LGEAEELFAQMEAERSVP--CAYAYNTMIM---GYGSAGRFEDAYKLLERLRERGCIPSV 354
Query: 205 ICILSSYLMLGHLKEVGEIIDQWK 228
+ S LG ++V E + ++
Sbjct: 355 VSFNSILTCLGKKRKVDEALSLFE 378
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY A++ A ++A LFE K + N ++Y+ ++ + VG++++ L+
Sbjct: 631 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 690
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSCDS 124
+EE+ +K + P+++T+N + + I++ + + EM C
Sbjct: 691 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP 736
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+Y+ L+H A + +F +KQ + +A YN ++ + G+V K ++EE
Sbjct: 564 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 623
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+K K V P + TY + A +D+ +E
Sbjct: 624 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 658
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 39/199 (19%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+++ + A +AEELF +++ A YN M+ Y S G+ E ++E +
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD-----------------EMSCDSGGSD 128
+ + +P + ++N ++ +D+ + +M C G +
Sbjct: 346 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVE 405
Query: 129 DWVK----------YVNLVNIYITASHLVNAESSTLVEAEK---SITQR----QWITYDF 171
+ + + NL+ + I L A L EA K S +QR +TY
Sbjct: 406 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARK--LEEAYKIFESASQRGCNPDCVTYCS 463
Query: 172 LIILYAGLGNKDKIDQIWK 190
LI GLG K ++D+ ++
Sbjct: 464 LI---DGLGKKGQVDEAYR 479
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 13/256 (5%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY ++ + E+A + + ++ ++L N L N M+ ++E+ + E
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIYIT 142
++ PD TY I +D+ + ++M D+G + + V Y +L+ N +I
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFI- 505
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKIDQIWKSLRMTKQK 198
H + + K + +R L+ Y G +K I++ +R
Sbjct: 506 --HGRKEDGHKIF---KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 560
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
R+Y ++ G +E I KQ + D A N ++ F G KA E
Sbjct: 561 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA-LDARAYNAVVDGFCKSGKVHKAYE 619
Query: 259 FHMLLLQKNCAPTNAS 274
+ +K PT A+
Sbjct: 620 ILEEMKEKCVQPTVAT 635
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 82/204 (40%), Gaps = 8/204 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT+L+ + E ++F+ + + + + N M G+VEK ++ E+I
Sbjct: 495 VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 554
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +PD+ +Y++ I + M G + D Y +V+ + +
Sbjct: 555 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK-QQGFALDARAYNAVVDGFCKSGK 613
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
V+ L E ++ Q TY ++ GL D++D+ + K K N
Sbjct: 614 -VHKAYEILEEMKEKCVQPTVATYGAIV---DGLAKIDRLDEAYMLFEEAKSKGIELNVV 669
Query: 204 -YICILSSYLMLGHLKEVGEIIDQ 226
Y ++ + +G + E I+++
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEE 693
>gi|302768815|ref|XP_002967827.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
gi|300164565|gb|EFJ31174.1| hypothetical protein SELMODRAFT_88115 [Selaginella moellendorffii]
Length = 289
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVAL 80
K + Y ALLH + A E ++LF +KQS + N L YN +M Y+ G ++ KV
Sbjct: 44 KDAGMYNALLHAFCKAGKLEAVDDLFRDMKQS-IRPNHLSYNILMHSYVKAGHELTKVVS 102
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V +E+ + V + +YN+ I++CA + + F M + + Y +L+N+Y
Sbjct: 103 VFKEMYLRGVKASVASYNILIAACATGKQAWEARVFFSNMK-KQDLEPNVITYSSLINVY 161
Query: 141 ITASHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
+ + + N ++ L E K+ T+ L+ Y G ++ +I+++++ +
Sbjct: 162 VASGDVGNCAAALDVLREMVKAEVMPNVTTFSCLLHGYGQEGRIEEAMKIFQTMKDLGIE 221
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA-----TSDFDISACNRLLGAFSDV 250
++ + +++ Y GH + +S S + C + +GA+ +V
Sbjct: 222 PSAITFNILMTMYSKSGHHALAQSCFHEMIESGLEPTYVSFLSLMYCFKSVGAYKEV 278
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ++++ A E A ++F+ + + L+ + + YN +++ Y VG + + V E+
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ +VPD+ T+ I + N++Q + +M + G + V + L++ +
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGF 343
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A + + E K Q + Y+ LI Y LG D ++ + + + K Y
Sbjct: 344 LDDALLA-VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402
Query: 206 CILSSYLMLGHL 217
I+S Y +G+L
Sbjct: 403 TIISGYCKVGNL 414
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 106/251 (42%), Gaps = 4/251 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVA 79
A + TY L+ + A + AE + +++ N N + +N M+ G++E
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 80 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
V +E+ R+ + PD+ +YN +S + + EM+ G D V + +L++
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT-QRGLVPDVVTFTSLIHA 302
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
A +L A + E+ + + +T+ LI + G D + +R +
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNE-VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ Y +++ Y LG + E+I + + D+ + ++ + VG + A +
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISGYCKVGNLDSAFQL 420
Query: 260 HMLLLQKNCAP 270
+ +L+K P
Sbjct: 421 NQKMLKKGVLP 431
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 12/239 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ E+A + ++ + + NA+ YN ++ + G+++ VV +
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213
Query: 86 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + N P++ T+N ++ ++ +K DEM G + D V Y L++ Y
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV-REGLAPDVVSYNTLLSGYCKVG 272
Query: 145 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L S V +E +TQR +T+ LI GN ++ + +R +M
Sbjct: 273 CL---HESLAVFSE--MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 327
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ ++ + G L + +++ ++ + N L+ + +G + A E
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVCYNALINGYCKLGRMDLAREL 385
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+ K A ELFE + Q + + Y ++ + G VEK + +E+
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
RK V+PD+ TY++ I+ + + + + L
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 3/195 (1%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN ++ L +S + + + R V P+++TYN+ + + A +++ + +M
Sbjct: 121 YNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+G + + V Y LV + A L AE + E+ + +T++ ++ G
Sbjct: 180 -GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ +++ + +Y +LS Y +G L E + + Q D+
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP-DVVTFT 297
Query: 242 RLLGAFSDVGLTEKA 256
L+ A G E+A
Sbjct: 298 SLIHATCKAGNLEQA 312
>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 117/273 (42%), Gaps = 10/273 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K F + G R P TY +L+ +++G ++A ++ +++ L +
Sbjct: 877 KAFSLFKGMRNHGTWP----NESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTF 932
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
+ ++ Y +G++ V EE+ R V P+ Y I+ + T N+++ + +M
Sbjct: 933 SAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMD- 991
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGN 181
+ G S + + +L+ Y L A+ TL E K + + + +I LYA LG
Sbjct: 992 EFGISANQIVLTSLIKAYSKVGCLEGAK--TLYEGMKDLEGGPDIVASNSMINLYADLGL 1049
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ I+ LR K ++ ++ Y LG L E ++ D+ KQS D ++ N
Sbjct: 1050 VSEAKLIFDDLRQ-KGSADGVSFATMMYLYKNLGMLDEAIDVADEMKQSGFLR-DCASFN 1107
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+++ ++ G E ++ + P +
Sbjct: 1108 KVMACYATNGQLSACGELLHEMISRRILPDTGT 1140
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ + TY L+ LY A + A ++F + + ++ + + +N M+ S G + +
Sbjct: 647 PRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAET 706
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E++ + + PD TYN+++S A NID K ++ + G D V + ++++
Sbjct: 707 LLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIR-EVGLFPDVVTHRAVLHV- 764
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ ++V + + E ++S + + +I +Y G DK +I+ + + +++
Sbjct: 765 LCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHLLEDELS 823
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
SR + I+ +Y G E E + K+ D+ N ++ A+ L +KA
Sbjct: 824 SRTRVAIIDAYAEKGLWAE-AENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKA 878
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+H + + ++A E++ R+ L + ++ +M ++ V ++EE+
Sbjct: 196 SYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEM 255
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+I+TY + I ID+ + + M D G D V Y L++ TA
Sbjct: 256 ESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD-DDGCGPDVVTYTVLIDALCTARK 314
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A + + S + +TY L+ ++ G+ DK+++IW + +
Sbjct: 315 LDDA-MCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFT 373
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSAT 232
++++ G + E +++D ++
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRKQGV 400
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ A+ + A LF ++K S+ + + Y ++ + G ++KV + E+
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ T+ + +++ I++ LD M G + Y L++ + A+
Sbjct: 361 EADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR-KQGVLPNLHTYNTLISGLLRANR 419
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A E + TY LI + G+ K + ++ +M + +
Sbjct: 420 LDDA-LDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFE--KMKARGIAPNIVA 476
Query: 206 CILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
C S Y + +G L E + ++ K S + D N ++ +S VG ++A + +
Sbjct: 477 CNASLYSLAEMGRLGEAKAMFNELKSSGLAP-DSVTYNMMMKCYSKVGQVDEAIKLLSEM 535
Query: 264 LQKNCAP 270
+ C P
Sbjct: 536 SKVQCEP 542
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T+ TY L+ + + KA E FE++K ++ N + N + +G++ + +
Sbjct: 437 PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAM 496
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSDDWVKYVNLVN 138
E+K + PD TYN+ + + +D+ K L EMS C+ D + +L++
Sbjct: 497 FNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP----DVIVINSLID 552
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSL 192
A + A E+ +TY+ IL AGLG + +I Q+++S+
Sbjct: 553 TLYKAGRVEEA-WQMFCRMEEMNLAPTVVTYN---ILLAGLGKEGQIQKAVQLFESM 605
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++YT L+ + A + A FE++KQ+ L + + YN M+ + E+ + E
Sbjct: 966 KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ + +VPD++TYN I + I++ K +E+
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 10/243 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T + Y L+ + E A LFE +K + + + YN ++ + G++ ++ +
Sbjct: 788 PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDL 847
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKYVNLVNIY 140
+E+ + P+ TYN+ IS+ + +D+ + + +S D S + L++
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF--SPTPCTFGPLIDGL 905
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ + L +A I Y+ L+ Y LG+ D + +K RM K+ +
Sbjct: 906 LKSGRLDDAHEMFDGMVHYGCRPNSAI-YNILVNGYGKLGHVDTACEFFK--RMVKEGIR 962
Query: 201 S--RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA-N 257
++Y ++ + G + + ++ KQ+ D D+ A N ++ TE+A +
Sbjct: 963 PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGL-DPDLVAYNLMINGLGRSQRTEEALS 1021
Query: 258 EFH 260
FH
Sbjct: 1022 LFH 1024
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T T+ L+ + + A E+F+ + N+ +YN ++ Y +G V+
Sbjct: 892 SPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACE 951
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + ++ + PD+ +Y + + +D + +++ +G D V Y ++N
Sbjct: 952 FFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLK-QAGLDPDLVAYNLMIN-G 1009
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ S S E + TY+ LI+ +G ++ +I++ L+ K
Sbjct: 1010 LGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPN 1069
Query: 201 SRNYICILSSYLMLGH 216
Y ++ Y + G+
Sbjct: 1070 VFTYNALIRGYTLSGN 1085
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 18/177 (10%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S Y L++ Y + A E F+R+ + + + Y ++ + G+V+ E
Sbjct: 930 SAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFE 989
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIYIT 142
++K+ + PD+ YNL I+ + ++ EM + G D Y +L+ N+ I
Sbjct: 990 KLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQ-NRGIVPDLYTYNSLILNLGIV 1048
Query: 143 ASHLVNAESSTLVEAEKSITQRQWI-------TYDFLIILYAGLGNKDKIDQIWKSL 192
+ EA K + Q+I TY+ LI Y GN + I+K +
Sbjct: 1049 G---------MIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 13 YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
YFE L + + Y +++ ++ TE+A LF ++ + + YN ++
Sbjct: 987 YFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLG 1046
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
VG +E+ + EE++ + P++FTYN I
Sbjct: 1047 IVGMIEEAGKIYEELQFIGLKPNVFTYNALI 1077
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 7/192 (3%)
Query: 38 KWTEKAEELFER-VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
K T A +F + K+ + +YN ++ ++ V VE + EE+K PD FT
Sbjct: 768 KKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFT 827
Query: 97 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STL 154
YN I + + I+++ DEM G + + Y +++ + ++ L A L
Sbjct: 828 YNSLIDAHGKSGKINELFDLYDEM-LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL 886
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
V + S T T+ LI G D +++ + + S Y +++ Y L
Sbjct: 887 VSGDFSPTP---CTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKL 943
Query: 215 GHLKEVGEIIDQ 226
GH+ E +
Sbjct: 944 GHVDTACEFFKR 955
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL++ +A EKAEE+FE++++ L + +YN +M Y G A + +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 86 KRKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ PD +YN+ + + A L+ D F +EM G + ++ L++ Y A
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF-EEMK-RLGIAPTMKSHMLLLSAYSKAR 418
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ E+ +E + ++ + ++ LY LG K+++I + Y
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVL-NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 477
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+++ Y G L+ + E+ + K+ D+ +GA+S L K E ++
Sbjct: 478 NILINIYGKAGFLERIEELFVELKEKNFRP-DVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 265 QKNCAPTNASG 275
CAP +
Sbjct: 537 DSGCAPDGGTA 547
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ETY +++LY A + + +L+ ++ N Y ++ + G EK +
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 83 EEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
E+++ + PD++ YN + S ++ + M C+ D Y +V+
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP----DRASYNIMVDA 378
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
Y A +AE + E ++ ++ L+ Y+ + K + I K M++ +
Sbjct: 379 YGRAGLHSDAE-AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE--MSENGV 435
Query: 200 TSRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
++ +L+ Y LG ++ +I+ + + + DIS N L+ + G E+
Sbjct: 436 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINIYGKAGFLERIE 494
Query: 258 EFHMLLLQKNCAP 270
E + L +KN P
Sbjct: 495 ELFVELKEKNFRP 507
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
E P +A S TY L+++Y A + E+ EELF +K+ N + + + + Y
Sbjct: 466 ENGPCTADIS-TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 524
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K V EE+ PD T + +S+C++ ++QV L M
Sbjct: 525 YVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 6 GIHS-GERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
G+HS E FE + A T +++ LL Y+ A+ K E + + + ++ + + +
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N M+ LY +GQ K+ ++ E++ DI TYN+ I+ ++++++ E+
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 4/246 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEE 84
+YTAL++ Y E + EL +R+K +S + L YN ++ G E + + E
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + + PDI TYN +S+CA D+ + M+ D G D Y +LV +
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGKLR 296
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L S L E + +Y+ L+ YA G+ + ++ ++ + Y
Sbjct: 297 RLEKV-SDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+L+ + G +V ++ + K S T D D + N L+ F + G ++ ++
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNT-DPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 265 QKNCAP 270
++N P
Sbjct: 415 EENIEP 420
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 4/249 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ L +K E+F+ + +S + Y ++ Y G+ E +++ +K
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 87 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P I TYN I++CA L+ + + EM + G D V Y L++
Sbjct: 204 NDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACAIRGL 262
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
AE + I TY L+ + L +K+ + + +Y
Sbjct: 263 GDEAEMVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYN 321
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L +Y G +KE + Q Q+A + + + LL F G + + + +
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQM-QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 266 KNCAPTNAS 274
N P A+
Sbjct: 381 SNTDPDAAT 389
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY+ LL+L+ + + +LF +K SN +A YN ++ ++ G ++V +
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFH 411
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
++ +N+ PD+ TY I +C + +K L M+ +
Sbjct: 412 DMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN 451
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P+S E Y +L Y A E+ + +++K++ F+ YN M+ +Y G +
Sbjct: 294 GFPVSL---EAYNCMLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWI 350
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
+ V+ V+ E+K + V PD+++YN I + + K + EM G S D V Y N
Sbjct: 351 QDVSNVLAELKDRGVEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRV-KGISPDRVTYAN 409
Query: 136 LV 137
L+
Sbjct: 410 LI 411
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 5/227 (2%)
Query: 26 TYTALLHLYAGAKWTEKA-EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
Y+ ++ +Y A+ + A L E KQ + + ++ +M+ Y G +EK+A
Sbjct: 126 AYSVIVRMYIKARRLKDACSVLAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYW 185
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
I++ V D YN I+ C + +D++ + DEM G + V + L++IY A
Sbjct: 186 IRKSQVKCDEAMYNCIINCCGRAIPVDELSRIFDEM-LQQGHLANTVTFNVLLDIYGKAG 244
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
AE ++ ++ + I+Y+ +I YA GN ++ + ++ ++ Y
Sbjct: 245 LFNRAEKVFIMARKQGLA--DIISYNTIIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAY 302
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
C+L +Y G L+E ++ + K+ A FD N ++ + G
Sbjct: 303 NCMLDAYGKAGRLEEFASVLQKMKR-AKCKFDHYTYNIMINIYGRRG 348
>gi|302799860|ref|XP_002981688.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
gi|300150520|gb|EFJ17170.1| hypothetical protein SELMODRAFT_115229 [Selaginella moellendorffii]
Length = 289
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVAL 80
K + Y ALLH + A E ++LF +KQS + N L YN +M Y+ G ++ KV
Sbjct: 44 KDAGMYNALLHAFCKAGKLEAVDDLFRDMKQS-IRPNHLSYNILMHSYVKAGHELTKVVS 102
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V +E+ + V + +YN+ I++CA + + F M + + Y +L+N+Y
Sbjct: 103 VFKEMYLRGVKASVASYNILIAACATGKQAWEARVFFSNMK-KQDLEPNVITYSSLINVY 161
Query: 141 ITASHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
+ + + N ++ L E K+ T+ L+ Y G ++ +I+++++ +
Sbjct: 162 VASGDVGNCAAALDVLREMVKAEVMPNVTTFSCLLHGYGQEGKIEEAMKIFQTMKDLGIE 221
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA-----TSDFDISACNRLLGAFSDV 250
++ + +++ Y GH + +S S + C + +GA+ +V
Sbjct: 222 PSAITFNILMTMYSKSGHHALAQSCFHEMIESGLEPTYVSFLSLMYCFKSVGAYKEV 278
>gi|345288455|gb|AEN80719.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288457|gb|AEN80720.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288459|gb|AEN80721.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288461|gb|AEN80722.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288463|gb|AEN80723.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288465|gb|AEN80724.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288467|gb|AEN80725.1| AT1G07590-like protein, partial [Capsella rubella]
gi|345288469|gb|AEN80726.1| AT1G07590-like protein, partial [Capsella rubella]
Length = 195
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 22 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 81
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M +G + V Y L + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 82 MK-KAGVEPNEVSYCILAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 139
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 140 GKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEEL 182
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 100/191 (52%), Gaps = 5/191 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K+ G+ E+Y E +P S + Y LL A +E++F ++K +L
Sbjct: 211 IAKLRGLPQAEKYIESVPESFRGELLYRTLLANCASQNNLIASEKIFNKMKDLDLPLTVF 270
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY + +K+A V+ ++++NV P +FTY + I S + +I +++ + M
Sbjct: 271 ACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYRILIDSKGHSNDIAGMEQVFETM 329
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
+ D ++ L+ + T++ L + L E E +++ ++QW+ L+ LYA L
Sbjct: 330 KEEGFEPD--IQLQALLARHYTSAGLKEKAEAILKEIEGENLEEKQWVCAT-LLRLYANL 386
Query: 180 GNKDKIDQIWK 190
G D++++IWK
Sbjct: 387 GKADEVERIWK 397
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S+ Y+ LL +YA K K ++L +R+ S L L +N ++ LY+ G+VEK V++
Sbjct: 439 SKNYSILLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNALVKLYIQAGEVEKADSVLQ 498
Query: 84 E-IKRKNVVPDIFTY 97
+ I++ + P TY
Sbjct: 499 KAIQQSQLQPMFTTY 513
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +KA +L++ + + N + Y+ ++ + GQVE ++E+
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++P+I TYN I + N+ + +KFL +M + S D + Y L++ YI
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDK 241
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A L EK Q +TY+ LI ++ GN + I++ + + Y+
Sbjct: 242 MHDA-FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 300
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
+++ ++ G+ KE ++ D+ Q + D
Sbjct: 301 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 111/283 (39%), Gaps = 40/283 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL+ + AE L +++ + + + ++ Y G+++K + + +
Sbjct: 53 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 112
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 127
+ + PDI TYN I ++D+ D+M C+ G
Sbjct: 113 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 172
Query: 128 DDWVKYVN-------LVNIYITASHLVNAESSTLVEAEKSITQR--------QWITYDFL 172
+D +++ L NI S + S V + Q+ ITY+ L
Sbjct: 173 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 232
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQ 229
I Y +DK+ +K L M +++ + Y +++ + + G+++E G I ++
Sbjct: 233 IHGYI---KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 289
Query: 230 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
D ++ G +++A + H +LQ+ AP +
Sbjct: 290 KGIEP-DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 7 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ G+++ + + ++ + + TY L+H Y A +L +++ + + + YN
Sbjct: 207 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 266
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ + G V++ + E++ K + PD +TY I+ N + + DEM
Sbjct: 267 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326
Query: 125 GGSDD 129
DD
Sbjct: 327 FAPDD 331
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ + K KA ELF+ + + N Y +++ Y G ++ +++ +K
Sbjct: 154 YIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRSGSFDRAFSLLDRMK 213
Query: 87 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
PD+ TY++ I SC + D+VK L +M+C G + V Y LV+ Y A
Sbjct: 214 ATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMAC-GGIRPNTVTYNTLVDAYGKAGR 272
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
ES+ L + W T + + + G + ++ ++ + + + Y
Sbjct: 273 FAEMESTLLEMLSEKCKPDVW-TMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYN 331
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 263
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 332 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 390
Query: 264 --LQKNC 268
++ NC
Sbjct: 391 DRIKPNC 397
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P +TY+ L+ A +K ++L + + N + YN ++ Y G+ +
Sbjct: 216 PGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRFAE 275
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ + E+ + PD++T N + + ++ I+ ++ ++ SG S + Y L+
Sbjct: 276 MESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQA-SGISPNIKTYNILL 334
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ Y A + + + +K +TY+ +I + G+ ++++ I++ ++ +
Sbjct: 335 DSYGKA-KMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDRI 393
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG-LTEKA 256
K ++ +Y +K++ ++ + S T+ DI N L+ A+ VG L E
Sbjct: 394 KPNCVTLCSLIRAYGRADQVKKIETVLRIIENSDTT-LDIVFFNCLVDAYGRVGCLAEMW 452
Query: 257 NEFHMLLLQK 266
+ +M+ L++
Sbjct: 453 DVLNMMKLER 462
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T + L + + E E +E+ + S +S N YN ++ Y EK+ V+E +
Sbjct: 294 TMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYM 353
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ I TYN+ I + +++Q++ M D + V +L+ Y A
Sbjct: 354 QKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDR-IKPNCVTLCSLIRAYGRADQ 412
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ E + L E S T + ++ L+ Y +G + ++W L M K + S + +
Sbjct: 413 VKKIE-TVLRIIENSDTTLDIVFFNCLVDAYGRVGC---LAEMWDVLNMMKLERVSPDKV 468
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 12/252 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQ----SNLSFNALMYNEMMTLYMSVGQVEKVA 79
S Y + A AK EE+ E KQ S FNA +++LY S G +
Sbjct: 59 SAIYKDTIRRLAAAKKFRYVEEILENQKQYQDMSKEGFNA----RLISLYGSSGMFDNAR 114
Query: 80 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
V +E+ + + ++N + +C + D+V +S + D V Y ++
Sbjct: 115 KVFDEMLERKCARTVLSFNALLGACVNSKKFDEVGGLFRGLSEELEIEPDLVSYNTVMKA 174
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQK 198
+ L +A S L E EK + IT++ L+ LYA G D ++IW+ ++ K
Sbjct: 175 FCEMGSLDSA-VSLLDEIEKKGLKPDLITFNTLLNGLYAN-GRFDAGERIWQRMKEKNVK 232
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
R+Y L + +K+ +++++ K +FDI + N L+ F + G E+A
Sbjct: 233 PDGRSYNEKLLGLALEKRMKDATKVVEEMKSEGI-EFDIFSYNALIRGFVNEGDLEEAKG 291
Query: 259 FHMLLLQKNCAP 270
++ + + + P
Sbjct: 292 WYGEIRKSDIKP 303
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 118/270 (43%), Gaps = 8/270 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ + GI + ++Y + +PL + Y L+ A +KAEE+F+ +K L
Sbjct: 222 IARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKEIKDLCLRLTVT 281
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ N+M+ LY + KVA V+ ++++NV P FTY L I + ++ ++ L+EM
Sbjct: 282 LCNQMILLYKRIAP-GKVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEM 340
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL-VEAEKSITQRQWITYDFLIILYAGL 179
G + YI AE+ +EA+ S ++ L+ LYA L
Sbjct: 341 KA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAAL 399
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
+ + +IW+ M + M +++ + ++ LG +++ E + +A
Sbjct: 400 NKPNDVARIWE---MCTEPMLE-DFLSAIKAWGELGLIEKAEETFEAM-ANAPEKLSSKY 454
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCA 269
N +L ++ L K +F + + C
Sbjct: 455 YNAMLNVYAQNKLLSKGKQFVERMCRDGCP 484
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 7 IHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
I E FE + + + +S+ Y A+L++YA K K ++ ER+ + L ++
Sbjct: 433 IEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDA 492
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPD---IFT-YNLWISSCAATLNIDQVKKFLDEM 120
++ LY++ G+VEK + + +N PD +FT Y + A +I +K D +
Sbjct: 493 LINLYVNSGEVEKADSFLLNVAEEN--PDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRL 550
Query: 121 SCDSGGSDDWVKYVNLVNIYITA 143
+ G + + Y L+ Y+ A
Sbjct: 551 K-NVGYAPRPLHYAVLLEAYVNA 572
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
+LLHLYA ++E + M + ++ + G++ + E +
Sbjct: 391 SLLHLYAALNKPNDVARIWEMCTEP-------MLEDFLSAIKAWGELGLIEKAEETFEAM 443
Query: 89 NVVPDIFT---YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P+ + YN ++ A + + K+F++ M C G + + + L+N+Y+ +
Sbjct: 444 ANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM-CRDGCPNGPLTWDALINLYVNSGE 502
Query: 146 LVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A+S L AE++ ++ T Y FL+ YA G+ ++I+ L+ +Y
Sbjct: 503 VEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHY 562
Query: 205 ICILSSYL 212
+L +Y+
Sbjct: 563 AVLLEAYV 570
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 119/273 (43%), Gaps = 14/273 (5%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
KV GI E F +P + Y L+ + + ++++ +L + +Y
Sbjct: 132 KVHGISEAESLFLRVPQEYQKELLYNNLVMAALDLDLIKHSYAYMRKMRELSLPISPYVY 191
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ L+ S + + ++ ++ ++K V P TYN+ + A NID + + +M
Sbjct: 192 NRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYNILLKIQANEHNIDGLARVFSDMKR 251
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGN 181
++ + ++ + + V T VEA E S+T W T + L+ILY LG
Sbjct: 252 AKIEPNEITYGILAISHAVARLYTV---CHTYVEAIENSMTGTNWSTLEILLILYGYLGK 308
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFDI 237
+ ++ + W+ ++ + S+++ + ++ +G + + +I Q K S T F
Sbjct: 309 EKELKRTWEIMQDLPH-VRSKSFTVAIEAFGKVGSIDQAEKIWVQIKSTKKLSLTEQF-- 365
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N +L + G+ +KA+ + C P
Sbjct: 366 ---NSILSVYCRHGVVDKASSVFKEMRANGCQP 395
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ YA A ++ E L++ ++ ++ N MY M+T+Y GQ +K ++ E+
Sbjct: 354 TYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREM 413
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ V PD YN+ I++ T ++Q + +M D G D V + +L++ A
Sbjct: 414 QQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQ-DGGIEPDVVSWNSLIDACCKAGQ 472
Query: 146 LVNA 149
+ A
Sbjct: 473 PLEA 476
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 109/276 (39%), Gaps = 17/276 (6%)
Query: 4 VFGIHSGERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
V I++G R F EG+ + K Y L+ A + E+++ S L +
Sbjct: 225 VVDIYTGFRLFQEMQAEGVQVDGKV---YNDLIFACGQAHKPNEGMFFLEKLQASGLVAD 281
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKK 115
Y +M G+ + ++EE+K + P++ YN + S ID VK
Sbjct: 282 RDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKT 341
Query: 116 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 175
L D+G S + + Y L++ Y A L++ + E + Y +I +
Sbjct: 342 LLR----DTGMSINKITYCLLIDAYARAG-LMDRLEALYQEMRDCDIRPNTYMYARMITI 396
Query: 176 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
Y G K ++ + ++ + Y I++++ L E I Q +
Sbjct: 397 YRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQL-EQARIAFFKMQDGGIEP 455
Query: 236 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
D+ + N L+ A G +A + + ++ CAPT
Sbjct: 456 DVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPT 491
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 44/100 (44%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ Y+AL + YA E+ + + +++ N+ N M N ++ + G+ ++
Sbjct: 559 GPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFA 618
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
V E IK + D TY + + +D+V DEM
Sbjct: 619 VFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEM 658
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ +YA A+ + A E + +K+ + + Y+ + Y +G E+ V++ +
Sbjct: 529 TYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTM 588
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++N+ ++ NL I++ + + + + ++G + D + Y L+ I A
Sbjct: 589 EKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIK-EAGLTADKITYTTLMKALIRAEK 647
Query: 146 L 146
L
Sbjct: 648 L 648
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P +A Y A L A+ TEKA E+++R+K+ N + M+ +Y Q
Sbjct: 383 GIPPNATV---YNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 439
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V E+K P+I TY +++ A ++ ++ +EM +G D Y
Sbjct: 440 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQ-QAGHEPDVYAYNA 498
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
L+ Y A L S + + +Y+ L+ Y G + + +++ L+
Sbjct: 499 LMEAYSRAG-LPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQR 557
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
T ++++ +L+++ G+ E++ Q +S + D A N +L A++ G
Sbjct: 558 GMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTP-DTFALNAMLNAYARAG 612
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 14/233 (6%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ET+T ++++Y AK + ++F +K N Y ++ + G EK V E
Sbjct: 423 TETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFE 482
Query: 84 EIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+++ PD++ YN + S ++ + M C+ D Y LV+ Y
Sbjct: 483 EMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP----DRASYNILVDAY 538
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A +AE + E ++ ++ L+ +A GN + +++ L K +T
Sbjct: 539 GRAGLHEDAE-AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLH--KSGLT 595
Query: 201 SRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ +L++Y G L ++ ++ ++ D D+ N + A+ G
Sbjct: 596 PDTFALNAMLNAYARAGRLDDMERLLAAMERRG--DADVGTYNVAVNAYGRAG 646
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 95/249 (38%), Gaps = 40/249 (16%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ Y + KAE ++ + ++ Y ++ Y + G + + V+ E++
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 380
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P+ YN ++ ++ + M + ++ + ++N+Y A
Sbjct: 381 EHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTET-FTLMINVYGKAKQP 439
Query: 147 VNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ S + KSI + I TY L+ +A G +K +++++ +
Sbjct: 440 MS--SMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEM------------- 484
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
Q A + D+ A N L+ A+S GL + A+E L+
Sbjct: 485 -----------------------QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 521
Query: 266 KNCAPTNAS 274
C P AS
Sbjct: 522 MGCEPDRAS 530
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 16/255 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 85
YT +LH Y+ EKA +LFER+K+ S + YN ++ ++ +G+ K+ V++E+
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITAS 144
+ K + D FT + +S+CA + + K+F E+ SC G V Y L+ ++ A
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC--GYEPGTVTYNALLQVFGKAG 330
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 202
A S L E E++ +TY+ L+ Y G + + + MTK+ +
Sbjct: 331 VYTEA-LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE--MMTKKGVMPNAI 387
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ +Y G E ++ K++ + N +L S +G ++NE +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP-NTCTYNAVL---SLLGKKSRSNEMIKM 443
Query: 263 LL---QKNCAPTNAS 274
L C+P A+
Sbjct: 444 LCDMKSNGCSPNRAT 458
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 52/96 (54%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ +Y KAEE+ + +++S L + + YN ++ + G +++ ++ E+
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+ + P IFTYN ++S A +++ ++ M+
Sbjct: 728 TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 50/95 (52%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L ++ ++AE + E +++ LS + + YN +M +Y+ G+ K +++ ++
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+ + PD+ +YN I + + + L EM+
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL ++ A +A + + +++++ +++ YNE++ Y+ G ++ A V+E +
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+K V+P+ TY I + D+ K M
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
>gi|302782984|ref|XP_002973265.1| hypothetical protein SELMODRAFT_98793 [Selaginella moellendorffii]
gi|300159018|gb|EFJ25639.1| hypothetical protein SELMODRAFT_98793 [Selaginella moellendorffii]
Length = 389
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 36/260 (13%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
KT TY +LL A A E + LF+++ + ++ + +N ++ + Q++ +
Sbjct: 68 KTIVTYNSLLQACAAALEIEHTKNLFDKMPE----WDIVSWNILLAAFAENKQLD----L 119
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
V++ R+ DI ++ L +++ A + +++ K+F D+M GS D V ++ ++
Sbjct: 120 VKDCFRRMPESDIVSWYLMLTTLAQSDRVEECKEFFDKMPEWHLGSPDVVSCNAMIAGFV 179
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
H V AE S++QR +T++ +I LYA G+ +I+ M
Sbjct: 180 ENGHFVQAEMMY-----GSMSQRDRVTHNTMIALYARNGDMPTARRIFDG-------MPE 227
Query: 202 RNYIC---ILSSYLMLGHLKEVGEIIDQWKQS--ATSDF---DI-SACNRLLGAFSDVGL 252
R+ C ++S Y GH ++ ++ + A ++F DI SACN GL
Sbjct: 228 RDMACWAGVISGYAQAGHPRDAIDLFRAMEMEGLAPNEFLFTDILSACNH-------TGL 280
Query: 253 TEKANEFHMLLLQKNCAPTN 272
++ + L+ +++ P +
Sbjct: 281 VRESWRYFALMAREHAIPPS 300
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 11/250 (4%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY LL+ EKAEE+ ++ ++ ++ + + YN ++ Y G V+K L E+
Sbjct: 326 RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQ 385
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + + P+ T+N IS T +D + ++ M + G S Y +L+N Y
Sbjct: 386 MEERGLEPNRITFNTVISKFCETGEVDHAETWVRRM-VEKGVSPTVETYNSLINGYGQKG 444
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK--IDQIWKSLRMTKQKMTSR 202
H V L E +K+ + I+Y LI KD+ ID M + ++
Sbjct: 445 HFVRC-FEFLDEMDKAGIKPNVISYGSLINCLC----KDRKLIDAEIVLADMIGRGVSPN 499
Query: 203 N--YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y ++ + L LK+ D+ QS D + N L+ G +KA +
Sbjct: 500 AEIYNMLIEASCSLSKLKDAFRFFDEMIQSGI-DATLVTYNTLINGLGRNGRVKKAEDLF 558
Query: 261 MLLLQKNCAP 270
+ + K C P
Sbjct: 559 LQMAGKGCNP 568
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 12/246 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +L + + A +LF+ + Q N+ N + YN ++ Y VG +E+ E +K
Sbjct: 195 YNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMK 254
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+NV ++ TYN ++ + +D ++ L EM ++ +V H
Sbjct: 255 EQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFV-------FDDHS 307
Query: 147 VNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A L + E I +R TY L+ +G +K +++ L + +Y
Sbjct: 308 NGAGDDGLFDGKEIRIDER---TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYN 364
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++++Y G +K+ +Q ++ I+ N ++ F + G + A + +++
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF-NTVISKFCETGEVDHAETWVRRMVE 423
Query: 266 KNCAPT 271
K +PT
Sbjct: 424 KGVSPT 429
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T ETY +L++ Y + E + + ++ + N + Y ++ ++ +
Sbjct: 427 SPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI 486
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+ ++ + V P+ YN+ I + + + +F DEM SG V Y L+N
Sbjct: 487 VLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEM-IQSGIDATLVTYNTLINGL 545
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ AE L A K ITY+ LI YA N K +++ +++ K T
Sbjct: 546 GRNGRVKKAEDLFLQMAGKGCNP-DVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPT 604
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 41/76 (53%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y +++ YA KA L +++ + + + YN ++ Y+ +V ++ +V+++
Sbjct: 641 VYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDM 700
Query: 86 KRKNVVPDIFTYNLWI 101
K K +VP + TYN+ I
Sbjct: 701 KAKGLVPKVDTYNILI 716
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 94/252 (37%), Gaps = 10/252 (3%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ + LL ++ EK +F V S +A+ Y + + + + ++K ++
Sbjct: 121 STRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELM 180
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ + + + P +F YNL + I +K DEM + V Y L++ Y
Sbjct: 181 KSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM-IQRNMVPNTVTYNTLIDGYCK 239
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ A E+++ + +TY+ L+ G G D ++ L M
Sbjct: 240 VGGIEEALGFKERMKEQNV-ECNLVTYNSLLNGLCGSGRVDDAREVL--LEMEGSGFLPG 296
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
++ S++ H G+ D D LL VG EKA E
Sbjct: 297 GFL----SFVFDDHSNGAGD--DGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350
Query: 263 LLQKNCAPTNAS 274
L++ P+ S
Sbjct: 351 LVENGVTPSKIS 362
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T ETYT+L+ ++ +AEE F++ + + + +M+N ++ + G +++ ++
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E+ VVPD T+N + +++ KK LDEM + G D + Y L++ Y
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMK-ERGIKPDHISYNTLISGYSK 544
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+ +A E +TY+ LI Y+ +G D +++ + ++
Sbjct: 545 RGDMKDA-LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQ 594
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 5/205 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ Y E A ++F+ +K NL + YN ++ ++E+ + V+ ++
Sbjct: 254 TYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKL 313
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+VP+ TYN I C ++D+ + DEM + G Y L++
Sbjct: 314 LESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMM-NRGIVASVFTYNLLIHALFLEKR 372
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ AE EK + + +TY+ I Y GN K ++ + + T Y
Sbjct: 373 IEEAEDMIKEMREKGV-EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQS 230
++ + G + E +++K+S
Sbjct: 432 SLIDVF---GKRNRMSEAEEKFKKS 453
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 37 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
KW +KA++ ++ + N + YN ++ Y G+ E + + + +K KN+ PD +T
Sbjct: 231 GKW-KKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYT 289
Query: 97 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
YN +IS I++ L ++ +SG + V Y L++
Sbjct: 290 YNSFISRLCKERRIEEASGVLCKL-LESGLVPNAVTYNALID 330
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 92/246 (37%), Gaps = 37/246 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+H K E+AE++ + +++ + + + YN + Y G +K + +E+
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418
Query: 86 KRKNV-----------------------------------VPDIFTYNLWISSCAATLNI 110
KN+ +PDI +N I NI
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
D+ + L EM ++ D V + L+ Y + A+ L E ++ + I+Y+
Sbjct: 479 DRAFQLLKEMD-NAKVVPDEVTFNTLMQGYCRERKVEEAK-KLLDEMKERGIKPDHISYN 536
Query: 171 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
LI Y+ G+ +++ + T Y ++ Y +G E++ + +
Sbjct: 537 TLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSK 596
Query: 231 ATSDFD 236
+ D
Sbjct: 597 GITPDD 602
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ A +KA+EL+ +++ S+ S + + Y +M + VG +E V E+
Sbjct: 307 TYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEM 366
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ TY + I + + ++D+ LD M+ G + Y ++ + A
Sbjct: 367 EVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMT-TKGIFPNLHTYNTMICGLLKARR 425
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L E+ L+E +S+ + +Y I Y G+ K +++ M K+ +
Sbjct: 426 L--DEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET--MKKRGIMPSIA 481
Query: 205 ICILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
C S Y + G + E +I + + S D N L+ +S G +KA +
Sbjct: 482 ACNASLYTLAETGRISEAEDIFNDLHKCGLSP-DSVTYNMLMKCYSKAGQIDKATQLLSE 540
Query: 263 LLQKNCAP 270
++ K C P
Sbjct: 541 MISKGCEP 548
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 84/200 (42%), Gaps = 3/200 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+HL + +A ++++R+ + + Y+ +M G K+ ++EE+
Sbjct: 203 SYNGLIHLLLPG-FCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEM 261
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + P+I+TY + I + ID EM D G D + Y L++ A
Sbjct: 262 KSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMD-DEGCGPDVITYTVLIDALCAAGK 320
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A+ V+ S +TY L+ + +G+ + + + W + + Y
Sbjct: 321 LDKAK-ELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYT 379
Query: 206 CILSSYLMLGHLKEVGEIID 225
++ + G + +++D
Sbjct: 380 ILIEALCKSGDVDRAFDMLD 399
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
TK GIH T E+Y L+ G+ +TEKA ELFE +K + N
Sbjct: 787 TKNLGIHP-------------TLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFT 833
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 112
YN ++ + ++ K+ + E++ + P+ T+N+ IS+ + N+++
Sbjct: 834 YNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNK 884
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TY L+ A +E+A ++FE + N+++YN ++ + G+++
Sbjct: 898 SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ +++ ++ + PD+ +Y + + T ID+ ++ +E+ +G D V Y ++N
Sbjct: 958 LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKL-TGLDPDTVSYNFIIN-G 1015
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ S ++ S E + TY+ LI+ G D ++++ L++ + +
Sbjct: 1016 LGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPS 1075
Query: 201 SRNYICILSSYLMLGH 216
Y ++ + + G+
Sbjct: 1076 VFTYNALIRGHSLSGN 1091
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 7 IHSGERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
I +YFE L L+ +T Y +++ ++ ++A LF +K +S + YN
Sbjct: 987 IDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNA 1046
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ G+V+ + EE++ + P +FTYN I + + N DQ +M
Sbjct: 1047 LILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMV-V 1105
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLV 155
G S + + L N Y A + N + +
Sbjct: 1106 GCSPNTETFAQLPNKYPRAGLVHNPFGAVFI 1136
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
S Y L++ + + + A ELF+++ + + + Y ++ G++++
Sbjct: 933 GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
EE+K + PD +YN I+ + +D+ EM + G S D Y L+ ++
Sbjct: 993 YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMK-NRGISPDLYTYNALI-LH 1050
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ + V+ E + + TY+ LI ++ GNKD+ ++K +
Sbjct: 1051 LGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A L+ A +AE++F + + LS +++ YN +M Y GQ++K ++ E+ K
Sbjct: 485 ASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISK 544
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
PD+ N I++ +D K +
Sbjct: 545 GCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EG+ S KT Y+AL+ T K L E +K L N Y + +
Sbjct: 229 EGMKPSMKT---YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARR 285
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
++ + +E+ + PD+ TY + I + A +D+ K+ +M S S D V Y+
Sbjct: 286 IDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASS-HSPDRVTYI 344
Query: 135 NLVNIY 140
L++ +
Sbjct: 345 TLMDKF 350
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 7/165 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T+ +Y + Y + KA + FE +K+ + + N + G++ + +
Sbjct: 443 PTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDI 502
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIY 140
++ + + PD TYN+ + + ID+ + L EM S G + V +N L+N
Sbjct: 503 FNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI--SKGCEPDVMIINSLINTL 560
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
A V+A + +TY+ IL GLG + KI
Sbjct: 561 YKAGR-VDAAWKMFGRLKNLKLAPTVVTYN---ILLTGLGKEGKI 601
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ++++ A E A ++F+ + + L+ + + YN +++ Y VG + + V E+
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ +VPD+ T+ I + N++Q + +M + G + V + L++ +
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR-ERGLRMNEVTFTALIDGFCKKGF 343
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A + + E K Q + Y+ LI Y LG D ++ + + + K Y
Sbjct: 344 LDDALLA-VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402
Query: 206 CILSSYLMLGHL 217
I+S Y +G+L
Sbjct: 403 TIISGYCKVGNL 414
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 106/251 (42%), Gaps = 4/251 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVA 79
A + TY L+ + A + AE + +++ N N + +N M+ G++E
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGAR 243
Query: 80 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
V +E+ R+ + PD+ +YN +S + + EM+ G D V + +L++
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT-QRGLVPDVVTFTSLIHA 302
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
A +L A + E+ + + +T+ LI + G D + +R +
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNE-VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ Y +++ Y LG + E+I + + D+ + ++ + VG + A +
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISGYCKVGNLDSAFQL 420
Query: 260 HMLLLQKNCAP 270
+ +L+K P
Sbjct: 421 NQKMLKKGVLP 431
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 108/250 (43%), Gaps = 9/250 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+L+H A E+A L ++++ L N + + ++ + G ++ L VEE+
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ + P + YN I+ +D ++ + EM D V Y +++ Y +
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR-VKPDVVTYSTIISGYCKVGN 413
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKMTSR 202
L +A +K + ITY LI GL + +++ ++++++ +
Sbjct: 414 LDSAFQLNQKMLKKGVLP-DAITYSSLI---RGLCEEKRLNDACELFENMLQLGVQPDEF 469
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ + G++++ + D+ + D+ + L+ S T++A+
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP-DVVTYSVLINGLSKSARTKEAHRLLFK 528
Query: 263 LLQKNCAPTN 272
L ++ P N
Sbjct: 529 LYHEDPVPDN 538
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 12/239 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ E+A + ++ + + NA+ YN ++ + G+++ VV +
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213
Query: 86 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + N P++ T+N ++ ++ +K DEM G + D V Y L++ Y
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREGLAPDVVSYNTLLSGYCKVG 272
Query: 145 HLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L S V +E +TQR +T+ LI GN ++ + +R +M
Sbjct: 273 CL---HESLAVFSE--MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 327
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ ++ + G L + +++ ++ + N L+ + +G + A E
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP-SVVCYNALINGYCKLGRMDLAREL 385
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 25/245 (10%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+ K A ELFE + Q + + Y ++ + G VEK + +E+
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
RK V+PD+ TY++ I+ + + + + L ++ + D+ +KY L+ + S
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN-IKYDALM---LCCS- 549
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
AE ++V K + G + D++++S+ K+ Y
Sbjct: 550 --KAEFKSVVALLKGFCMK---------------GLMKEADKVYQSMLDRNWKLDGSVYS 592
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ + G++++ Q +S S S + + G F + + E N LL
Sbjct: 593 ILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL-- 650
Query: 266 KNCAP 270
C P
Sbjct: 651 -TCCP 654
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 80/195 (41%), Gaps = 3/195 (1%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN ++ L +S + + + R V P+++TYN+ + + A +++ + +M
Sbjct: 121 YNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+G + + V Y LV + A L AE + E+ + +T++ ++ G
Sbjct: 180 -GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ +++ + +Y +LS Y +G L E + + Q D+
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP-DVVTFT 297
Query: 242 RLLGAFSDVGLTEKA 256
L+ A G E+A
Sbjct: 298 SLIHATCKAGNLEQA 312
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
ETY L+ Y ++ ++ E++++ + N + Y ++ G++ + +V+ +
Sbjct: 457 ETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRD 516
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + V+P+ YN+ I + +F DEM S S V Y L++
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM-RSEISPTLVTYNVLIDGLCKKG 575
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L AE L + S ITY+ LI YA GN K ++++++ K T R Y
Sbjct: 576 KLTEAE-DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTY 634
Query: 205 ICILSSYLMLGHLKEVGEIIDQ-WKQSATSDF--DISACNRLLGAFSDVGLTEKANEFHM 261
++S G KE E++++ + + + D N ++ ++++G T+KA H
Sbjct: 635 HPLIS-----GCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQ 689
Query: 262 LLLQKNCAP 270
+L + P
Sbjct: 690 GMLDQGIHP 698
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 9/248 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ K AE++F+ + NL + + YN ++ Y VG+++ + E +K
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK 273
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K+V P+I T+N +S + + + L EM + G D Y L + +
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVN-GFMPDGYTYSILFDGLLRCDDG 332
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSRN-- 203
A EK I + IL GL + K+++ + L + T+ + +
Sbjct: 333 NGAMELYEQATEKGIRINNYTGS----ILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y ++ Y +G + + I++ + I+ N L+ F D+ +KA E+ +
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITF-NSLIDKFCDMKEMDKAEEWVKKM 447
Query: 264 LQKNCAPT 271
+K P+
Sbjct: 448 AEKGVTPS 455
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 92/230 (40%), Gaps = 3/230 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y ++ Y KA ER++ L N++ +N ++ + + +++K V+++
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K V P + TYN I D+ + L++M + G + V Y +L+N +
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME-EIGVKPNVVSYGSLINCLCKDGKI 507
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
+ AE + + + Y+ LI +G + + + ++ T Y
Sbjct: 508 LEAEIVLRDMICRGVLPNAQV-YNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNV 566
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ G L E + + Q S S D+ N L+ +++ G K
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSSGHSP-DVITYNSLISGYANAGNVSKC 615
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
K +LF ++ S + MY + + + + ++ ++ ++++ V P++F YN+ I
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
I +K DEM C+ V Y L++ Y L A EKS+
Sbjct: 219 GGLCREKRIRDAEKMFDEM-CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV 277
Query: 162 TQRQWITYDFLI 173
IT++ L+
Sbjct: 278 AP-NIITFNSLL 288
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 112/265 (42%), Gaps = 10/265 (3%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 64
I E+ F+ + L+ YT + + A + + +A ++F + S + NA+ +N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---S 121
+M +++ G+ EKV V ++K+ PD TYN I + N++ K L+ M
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
C+ S N + YI VN + ++ + +TY+ L+ ++ G +
Sbjct: 391 CEVNAST-----FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKS 445
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
D + ++ K + + + Y +++ + +GH ++ + + +S
Sbjct: 446 TDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQK 266
+L G +K E ++QK
Sbjct: 506 MVLAQLRRAGQLKKHEELVEKMIQK 530
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
TK+ GI GE+ F +PL + Y L+ + +++++ + L+
Sbjct: 136 TKLHGISQGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLV 195
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N ++ L+ S + + + ++ ++K V + TYN+ + A NI+ + K EM
Sbjct: 196 FNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMK 255
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLG 180
++ V Y L + A AE+ VEA EKSIT W T D LIILY LG
Sbjct: 256 QQQVEPNE-VSYCLLATAHAVAKLYTVAEA--YVEAVEKSITGNNWSTLDVLIILYGYLG 312
Query: 181 NKDKIDQIWKS---LRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
++ + ++ R+ + N IC+ ++ L L E+G+
Sbjct: 313 KPTDLEPLVRNKVKKRVEINRAIQFNDICLFQTWEALKTL-ELGK 356
>gi|334188265|ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 7/248 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ + K EKA ELF+ + N +Y +++ Y G+ + ++E +K
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 87 RK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
N PD+ TY++ I S D+V+ L +M G + + Y L++ Y A
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR-RQGIRPNTITYNTLIDAYGKAKM 271
Query: 146 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
V E STL++ E W T + + + G G + ++ ++ + + + R
Sbjct: 272 FVEME-STLIQMLGEDDCKPDSW-TMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ +L SY G+ K++ ++ ++ Q + I N ++ AF G ++ L+
Sbjct: 330 FNILLDSYGKSGNYKKMSAVM-EYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLM 388
Query: 264 LQKNCAPT 271
+ P+
Sbjct: 389 QSERIFPS 396
>gi|224089803|ref|XP_002308816.1| predicted protein [Populus trichocarpa]
gi|222854792|gb|EEE92339.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALLH Y A++ E A +++ +K+ L N ++YN ++ + +G V+K + E++
Sbjct: 353 TYAALLHAYGRARYGEDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDM 412
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K + PD +T++ I+ + + + + L+EM
Sbjct: 413 KSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEM 447
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 4/216 (1%)
Query: 13 YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
+FE +P + T + ++ Y A EKA L++R + +A ++ ++ +Y
Sbjct: 233 WFEKMPSFGLEPDDVTLSTMIDSYGRAGNVEKALSLYDRARTGEWRLDATAFSTLIRIYK 292
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
G + V EE+K V P++ YN+ + + QVKKF ++ D+G S +
Sbjct: 293 VAGNFDGCLNVYEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFYQDI-IDNGLSPSF 351
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V Y L++ Y A + +A EK + + Y+ ++ + A LG+ DK +I++
Sbjct: 352 VTYAALLHAYGRARYGEDAFKIYREMKEKGLGL-NVVLYNSILAMCADLGHVDKAVEIFE 410
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
++ + K S + +++ + G + E +++
Sbjct: 411 DMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNE 446
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y ++L + A +KA E+FE +K S + ++ ++ M+T++ G+V + + E+
Sbjct: 389 YNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEAENTLNEMF 448
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQV 113
P+IF I ID V
Sbjct: 449 EAGFQPNIFILTSLIQCYGKAQRIDDV 475
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ Y + + A+++ +++ N + YN ++ G VE+ +++
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 178
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +VPD FTY I+ + ++ K LDEMSC + + V Y NL++ ++
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREG- 236
Query: 146 LVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
NA+ + + E + Q ITYD L+ +G D+ + K + + +
Sbjct: 237 --NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y I+ + + K+ ++ + + + S ++ + ++ G EKA++ +
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGISP-NVYTYSIMIHGLCQSGEPEKASDLLEEM 353
Query: 264 LQKNCAP 270
K P
Sbjct: 354 TTKGLKP 360
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 102/231 (44%), Gaps = 3/231 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++H + EKA +L E + L NA +Y +++ Y G V + +++
Sbjct: 329 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 388
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ NV+PD++ YN I + +++ K+ +M + G + Y L++ Y+
Sbjct: 389 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGD 447
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +AE + + I D L+ Y + +K+ +KS+ + +R Y
Sbjct: 448 LESAEQLVQRMLDTGLKPNDVIYID-LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 506
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ + G+++ ++ + +++ + D+ + L+ EKA
Sbjct: 507 ILIHNLSSSGNMEAAFRVLSEIEKNGSVP-DVHVYSSLISGLCKTADREKA 556
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 35/131 (26%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA------ 79
TY+ L+H Y E AE+L +R+ + L N ++Y +++ Y +EKV+
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 80 -----------------------------LVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
V+ EI++ VPD+ Y+ IS T +
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 111 DQVKKFLDEMS 121
++ LDEMS
Sbjct: 554 EKAFGILDEMS 564
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 113/255 (44%), Gaps = 12/255 (4%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVE 83
+T +LH Y+ E+A +FE+++++ LS + YN M+ +Y +G+ K+ +++
Sbjct: 210 RAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ + D FT + IS+C +D+ +KF + + G Y +L+ ++ A
Sbjct: 270 EMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE-GYVAGTFTYNSLLQVFGKA 328
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKM 199
+ + S L E EK+ +TY+ L+ Y G D ID + + M
Sbjct: 329 G-IYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMP---- 383
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ Y ++++Y G + Q K+S ++ N +LG E+ +
Sbjct: 384 NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVP-NVCTYNAILGMLGKKSRLEEMIDM 442
Query: 260 HMLLLQKNCAPTNAS 274
+ CAP + +
Sbjct: 443 LCDMRSNGCAPNSVT 457
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 5/246 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL+ A E AE + +K N Y+ M+ Y G + + EEI
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 86 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ P I L +++ + + F + C G D V + ++++I+ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQE--FCKHGYKPDLVLFNSMLSIF-AKN 643
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + L +S Q +TY+ L+ +YA G K ++I K ++ + K +Y
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSY 703
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ + G ++E + + S I N + +S G+ + E ++
Sbjct: 704 NTVIKGFCRQGLMQEAIRTLSEMTISGIRPC-IVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Query: 265 QKNCAP 270
Q +C P
Sbjct: 763 QHDCRP 768
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 109/249 (43%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL ++ A +A + + ++++N + + YNE++ Y+ G E+ A ++ +
Sbjct: 317 TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
RK ++P+ TY I++ D+ F +M +SG + Y ++ + S
Sbjct: 377 IRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK-ESGCVPNVCTYNAILGMLGKKSR 435
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L L + + +T++ ++ + G ++++++ ++ + +
Sbjct: 436 L-EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFN 494
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +Y G +V ++ ++ ++ + ++ N LL A + G E A + +
Sbjct: 495 ALIGAYGRCGSQIDVVKMYEEMIKAGFTPC-VTTYNALLNALARRGDWEAAESVILDMKS 553
Query: 266 KNCAPTNAS 274
K P S
Sbjct: 554 KGFKPNETS 562
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 9/214 (4%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
++A + F R+K YN ++ ++ G + +++E+++ N PD+ TYN
Sbjct: 297 DEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNEL 356
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+++ ++ F+D M G + + Y ++N Y A A S + ++S
Sbjct: 357 VAAYVRAGFHEEGADFIDTM-IRKGIMPNAITYTTVINAYGKAGKEDKA-LSFFRQMKES 414
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL--- 217
TY+ ++ + LG K +++++ L + + N + + M G+
Sbjct: 415 GCVPNVCTYNAILGM---LGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMH 471
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
K V + + K S + + N L+GA+ G
Sbjct: 472 KYVNRVFREMK-SCGFEPNRDTFNALIGAYGRCG 504
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 13/255 (5%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVAL- 80
T + Y A++ +YA K +EL + ++ + + +N ++ + G V +A+
Sbjct: 253 TVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIE 312
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E++R + PDI TYN IS+C+ N+++ K ++M D W Y ++++Y
Sbjct: 313 LLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWT-YNAMISVY 371
Query: 141 ITASHLVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LRMTK 196
++ E+ L + E +TY+ L+ +A GN DK+ +I + + K
Sbjct: 372 GRCG--MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGK 429
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+MT Y I+ Y G ++ K S S D L+ + + ++A
Sbjct: 430 DEMT---YNTIIHMYGKRGQHDLAFQLYSDMKLSGRSP-DAVTYTVLIDSLGKANMIKEA 485
Query: 257 NEFHMLLLQKNCAPT 271
E +L PT
Sbjct: 486 AEVMSEMLNAXVKPT 500
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L LY G +K ++++ ++++ L + YN ++ +Y + E+ ++ E++
Sbjct: 957 WNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMR 1016
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R + P + TY IS+ ++Q ++ + + D ++ ++ ++ + +
Sbjct: 1017 RVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHI-MMKMFRNSGNH 1075
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE V E + + T L++ Y+G G ++ +++ +L++ +++ Y
Sbjct: 1076 SKAEKLLGVMKEAGV-EPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSS 1134
Query: 207 ILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISAC 240
++ +YL G H + ++++ K D I C
Sbjct: 1135 VIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTC 1169
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ + AL+H YA + E+A +F + + S N +M + G+++++ +V++E
Sbjct: 815 KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 874
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + L + + A NI +VKK M +G Y ++ +
Sbjct: 875 LQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKA-AGYFPTMHLYRIMIGLLAKGK 933
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + E + + E E + + ++ ++ LY G+G+ K Q+++ ++ K Y
Sbjct: 934 RVRDVE-AMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTY 992
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ Y +E ++ + ++ + L+ AF + + E+A E LL
Sbjct: 993 NTLILMYCRDRRPEEGLSLMHEMRRVGLEP-KLDTYKSLISAFGKLQMVEQAEELFEGLL 1051
Query: 265 QKNC 268
K C
Sbjct: 1052 SKEC 1055
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 83/211 (39%), Gaps = 38/211 (18%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN M+++Y G + + ++++ K +PD TYN + + A N+D+VK+ ++M
Sbjct: 364 YNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMV 423
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
G D+ +TY+ +I +Y G
Sbjct: 424 KMGFGKDE-------------------------------------MTYNTIIHMYGKRGQ 446
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
D Q++ ++++ + + Y ++ S +KE E++ + + + +
Sbjct: 447 HDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKP-TLRTFS 505
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
L+ ++ G +A E +L+ P +
Sbjct: 506 ALICGYAKAGKRVEAEETFDCMLRSGIKPDH 536
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ + + E+AEELFE + + Y+ MM ++ + G K ++
Sbjct: 1025 DTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGV 1084
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+K V P I T +L + S + + ++ +K LD + + G + Y ++++ Y+
Sbjct: 1085 MKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVE-GLPLSTLPYSSVIDAYL 1140
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 113/255 (44%), Gaps = 12/255 (4%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVE 83
+T +LH Y+ E+A +FE+++++ LS + YN M+ +Y +G+ K+ +++
Sbjct: 210 RAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ + D FT + IS+C +D+ +KF + + G Y +L+ ++ A
Sbjct: 270 EMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSE-GYVAGTFTYNSLLQVFGKA 328
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKM 199
+ + S L E EK+ +TY+ L+ Y G D ID + + M
Sbjct: 329 G-IYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMP---- 383
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ Y ++++Y G + Q K+S ++ N +LG E+ +
Sbjct: 384 NAITYTTVINAYGKAGKEDKALSFFRQMKESGCVP-NVCTYNAILGMLGKKSRLEEMIDM 442
Query: 260 HMLLLQKNCAPTNAS 274
+ CAP + +
Sbjct: 443 LCDMRSNGCAPNSVT 457
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 5/246 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL+ A E AE + +K N Y+ M+ Y G + + EEI
Sbjct: 527 TYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI 586
Query: 86 KRKNVVPD-IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ P I L +++ + + F + C G D V + ++++I+ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQE--FCKHGYKPDLVLFNSMLSIF-AKN 643
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + L +S Q +TY+ L+ +YA G K ++I K ++ + K +Y
Sbjct: 644 KMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSY 703
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ + G ++E + + S I N + +S G+ + E ++
Sbjct: 704 NTVIKGFCRQGLMQEAIRTLSEMTISGIRPC-IVTYNTFVAGYSGKGMFSEVEEVISYMI 762
Query: 265 QKNCAP 270
Q +C P
Sbjct: 763 QHDCRP 768
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 109/249 (43%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL ++ A +A + + ++++N + + YNE++ Y+ G E+ A ++ +
Sbjct: 317 TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
RK ++P+ TY I++ D+ F +M +SG + Y ++ + S
Sbjct: 377 IRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMK-ESGCVPNVCTYNAILGMLGKKSR 435
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L L + + +T++ ++ + G ++++++ ++ + +
Sbjct: 436 L-EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFN 494
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +Y G +V ++ ++ ++ + ++ N LL A + G E A + +
Sbjct: 495 ALIGAYGRCGSQIDVVKMYEEMIKAGFTPC-VTTYNALLNALARRGDWEAAESVILDMKS 553
Query: 266 KNCAPTNAS 274
K P S
Sbjct: 554 KGFKPNETS 562
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 9/214 (4%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
++A + F R+K YN ++ ++ G + +++E+++ N PD+ TYN
Sbjct: 297 DEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNEL 356
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+++ ++ F+D M G + + Y ++N Y A A S + ++S
Sbjct: 357 VAAYVRAGFHEEGADFIDTM-IRKGIMPNAITYTTVINAYGKAGKEDKA-LSFFRQMKES 414
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL--- 217
TY+ ++ + LG K +++++ L + + N + + M G+
Sbjct: 415 GCVPNVCTYNAILGM---LGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMH 471
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
K V + + K S + + N L+GA+ G
Sbjct: 472 KYVNRVFREMK-SCGFEPNRDTFNALIGAYGRCG 504
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +KA +L++ + + N + Y+ ++ + GQVE ++E+
Sbjct: 377 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 436
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++P+I TYN I + N+ + +KFL +M + S D + Y L++ YI
Sbjct: 437 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDK 495
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A L EK Q +TY+ LI ++ GN + I++ + + Y+
Sbjct: 496 MHDA-FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 554
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
+++ ++ G+ KE ++ D+ Q
Sbjct: 555 SMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++L + +KA E+F+ + ++ + + ++ + VG++E+ + +E+
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 226
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + PD+ +++ I A +D +L EM C G D V Y ++ + A
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC-FGLVPDGVIYTMVIGGFCRAGL 285
Query: 146 LVNA 149
+ +A
Sbjct: 286 MSDA 289
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 4/206 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A ++T L+ + E+A ++++ ++ + + + ++ ++ L+ G+++
Sbjct: 197 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 256
Query: 81 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
+ E++ +VPD Y + I C A L D + + DEM G D V Y L+N
Sbjct: 257 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL-RVRDEM-VGCGCLPDVVTYNTLLNG 314
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
L++AE L E + T+ LI Y G DK Q++ ++ + +
Sbjct: 315 LCKERRLLDAE-GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 373
Query: 200 TSRNYICILSSYLMLGHLKEVGEIID 225
Y ++ G L + ++ D
Sbjct: 374 DIVTYNTLIDGMCRQGDLDKANDLWD 399
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+++ L+ L+A + A ++ L + ++Y ++ + G + V +E+
Sbjct: 237 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+PD+ TYN ++ + + L+EM + G D + L++ Y
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR-ERGVPPDLCTFTTLIHGYCIEGK 355
Query: 146 LVNAESSTLVEAEKSITQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
L A L + + QR +TY+ LI G+ DK + +W + +
Sbjct: 356 LDKA----LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 411
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ S+ G +++ +D+ +I N ++ + G K +F
Sbjct: 412 TYSILIDSHCEKGQVEDAFGFLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQK 470
Query: 263 LLQKNCAP 270
++ +P
Sbjct: 471 MMVNKVSP 478
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 89/234 (38%), Gaps = 3/234 (1%)
Query: 37 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
A W A + + V SN N N M+ Y + +KV V+ E++++ V PD+ T
Sbjct: 73 AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 132
Query: 97 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 156
+N+ + + + + +D M S G + N V + S + + E
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSMV--SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190
Query: 157 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 216
+ ++ LI + +G ++ +I+K +R K ++ C++ + G
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250
Query: 217 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + + + D ++G F GL A ++ C P
Sbjct: 251 MDHAMAYLREMRCFGLVP-DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 303
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 111/286 (38%), Gaps = 40/286 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL+ + AE L +++ + + + ++ Y G+++K + + +
Sbjct: 307 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 366
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 127
+ + PDI TYN I ++D+ D+M C+ G
Sbjct: 367 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 426
Query: 128 DDWVKYVN-------LVNIYITASHLVNAESSTLVEAEKSITQR--------QWITYDFL 172
+D +++ L NI S + S V + Q+ ITY+ L
Sbjct: 427 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 486
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQ 229
I Y +DK+ +K L M +++ + Y +++ + + G+++E G I ++
Sbjct: 487 IHGYI---KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 543
Query: 230 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNASG 275
D ++ G +++A + H +LQ+ A+G
Sbjct: 544 KGIEP-DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAG 588
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +KA +L++ + + N + Y+ ++ + GQVE ++E+
Sbjct: 438 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 497
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++P+I TYN I + N+ + +KFL +M + S D + Y L++ YI
Sbjct: 498 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-VSPDLITYNTLIHGYIKEDK 556
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A L EK Q +TY+ LI ++ GN + I++ + + Y+
Sbjct: 557 MHDA-FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 615
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
+++ ++ G+ KE ++ D+ Q + D
Sbjct: 616 SMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++L + +KA E+F+ + ++ + + ++ + VG++E+ + +E+
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 287
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + PD+ +++ I A +D +L EM C G D V Y ++ + A
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC-FGLVPDGVIYTMVIGGFCRAGL 346
Query: 146 LVNA 149
+ +A
Sbjct: 347 MSDA 350
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 4/206 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A ++T L+ + E+A ++++ ++ + + + ++ ++ L+ G+++
Sbjct: 258 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 317
Query: 81 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
+ E++ +VPD Y + I C A L D + + DEM G D V Y L+N
Sbjct: 318 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL-RVRDEM-VGCGCLPDVVTYNTLLNG 375
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
L++AE L E + T+ LI Y G DK Q++ ++ + +
Sbjct: 376 LCKERRLLDAE-GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 434
Query: 200 TSRNYICILSSYLMLGHLKEVGEIID 225
Y ++ G L + ++ D
Sbjct: 435 DIVTYNTLIDGMCRQGDLDKANDLWD 460
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+++ L+ L+A + A ++ L + ++Y ++ + G + V +E+
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+PD+ TYN ++ + + L+EM + G D + L++ Y
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR-ERGVPPDLCTFTTLIHGYCIEGK 416
Query: 146 LVNAESSTLVEAEKSITQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
L A L + + QR +TY+ LI G+ DK + +W + +
Sbjct: 417 LDKA----LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 472
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ S+ G +++ +D+ +I N ++ + G K +F
Sbjct: 473 TYSILIDSHCEKGQVEDAFGFLDEMINKGILP-NIMTYNSIIKGYCRSGNVSKGQKFLQK 531
Query: 263 LLQKNCAP 270
++ +P
Sbjct: 532 MMVNKVSP 539
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 111/283 (39%), Gaps = 40/283 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL+ + AE L +++ + + + ++ Y G+++K + + +
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 127
+ + PDI TYN I ++D+ D+M C+ G
Sbjct: 428 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 487
Query: 128 DDWVKYVN-------LVNIYITASHLVNAESSTLVEAEKSITQR--------QWITYDFL 172
+D +++ L NI S + S V + Q+ ITY+ L
Sbjct: 488 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQ 229
I G +DK+ +K L M +++ + Y +++ + + G+++E G I ++
Sbjct: 548 I---HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 604
Query: 230 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
D ++ G +++A + H +LQ+ AP +
Sbjct: 605 KGIEP-DRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 89/234 (38%), Gaps = 3/234 (1%)
Query: 37 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
A W A + + V SN N N M+ Y + +KV V+ E++++ V PD+ T
Sbjct: 134 AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 193
Query: 97 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 156
+N+ + + + + +D M S G + N V + S + + E
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMV--SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251
Query: 157 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 216
+ ++ LI + +G ++ +I+K +R K ++ C++ + G
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311
Query: 217 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + + + D ++G F GL A ++ C P
Sbjct: 312 MDHAMAYLREMRCFGLVP-DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 364
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 7 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ G+++ + + ++ + + TY L+H Y A +L +++ + + + YN
Sbjct: 522 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 581
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ + G V++ + E++ K + PD +TY I+ N + + DEM
Sbjct: 582 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641
Query: 125 GGSDD 129
DD
Sbjct: 642 FAPDD 646
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T YT L+ G +AE +F ++ S + N YN MM Y + V+K +
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+E+ ++P++ T+ + I T + +KFL +M+ G + Y L++ Y
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYC 344
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
A +L A S E EK TY LI G+ ++ D + + ++ +
Sbjct: 345 KAGNLSEA-LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y ++ Y G++++ E+ Q + +I + L+ + G E A +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKAGKMEAAMGLYT 462
Query: 262 LLLQKNCAP 270
++ K P
Sbjct: 463 EMVIKGLLP 471
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ G E+A+ L + +K+ NA+ YN ++ Y G +EK V ++
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
K + P+I T++ I ++ EM G D V Y L++
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI-KGLLPDVVAYTALID 481
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT +++ + ++A ELFE +K+ S N+ YN ++ Y G+ EK + +
Sbjct: 173 SYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGM 232
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + +PD++TYN I C + + EM G + D V Y +++ Y S
Sbjct: 233 EDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQ-RKGCTPDRVTYNTMLDAYSKWSR 291
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A T W TY+ L+ G+ + QI+ L+ ++
Sbjct: 292 RGRARDLLKTMKRAGCTPDLW-TYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFS 350
Query: 206 CILSSYLMLGHLKEV 220
+++ Y LG+ +E
Sbjct: 351 ALINMYGRLGYFEEA 365
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 14 FEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
FEG+ + A + YTALL YA ++A LFE +K+ S N L YN ++
Sbjct: 53 FEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTK 112
Query: 72 VG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
++ + + EE+K+ V P+ TYN +++C D + L EM
Sbjct: 113 RAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEM---------- 162
Query: 131 VKYVNLVNIYITASHLVNA--------ESSTLVEAEKSI--TQRQWITYDFLIILYAGLG 180
K VN + I+ + ++N+ E+ L E K + + W TY+ L+ YA G
Sbjct: 163 -KAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSW-TYNSLLKAYAREG 220
Query: 181 NKDK 184
+K
Sbjct: 221 RYEK 224
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 8/196 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL YA EKA LF ++ + YN ++ + G + V E+
Sbjct: 208 TYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEM 267
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+RK PD TYN + + + + + L M D W NI + A+
Sbjct: 268 QRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWT-----YNILLDAAG 322
Query: 146 LVNAESSTLV---EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ S + E + + +++ LI +Y LG ++ ++ W +R T +
Sbjct: 323 KAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNAT 382
Query: 203 NYICILSSYLMLGHLK 218
Y +++SY G K
Sbjct: 383 AYCGLMNSYSHHGMYK 398
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 97/229 (42%), Gaps = 4/229 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A E+FE + ++ ++ + Y +++ Y G +++ + E +K K P++ TYN I+
Sbjct: 49 AREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLIN 108
Query: 103 SCAA-TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+C + + +EM +G + + Y +VN + S L + S L E +
Sbjct: 109 ACTKRAYRLPDLVGLFEEMK-QAGVQPNDITYNCMVNACVCLS-LFDTASQILKEMKAVN 166
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
I+Y +I G D+ ++++ ++ + S Y +L +Y G ++
Sbjct: 167 CLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAM 226
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + D+ N ++ GL +A + + +K C P
Sbjct: 227 CLFVGMEDEGCIP-DLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTP 274
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y A++ Y GA + A L V + + +A YN ++ G+ V++E+
Sbjct: 3 YNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R+ VPD+ TY + + + Q K LDEM D G + D V Y +VN I
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR-DKGCTPDIVTYNVVVN-GICQEGR 117
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
V+ L + ++Y+ I+ GL ++ + + + QK N +
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYN---IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 174
Query: 207 --ILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+L S+L L E E+++Q + + +S N LL AF +KA F L+
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSY-NPLLHAFCKQKKMDKAMAFLDLM 233
Query: 264 LQKNCAP 270
+ + C P
Sbjct: 234 VSRGCYP 240
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y +L A+ E AEEL + Q N + +N +++ G VE V+E+I
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ P+ +YN + + +D+ FLD M G D V Y L+
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV-SRGCYPDIVSYNTLL 249
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 83/202 (41%), Gaps = 5/202 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ E A E+ E++ + + N+L YN ++ + +++K ++ +
Sbjct: 174 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PDI +YN +++ + +D + L ++ D G + + Y N V +T +
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK-DKGCAPVLISY-NTVIDGLTKAG 291
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L E Q ITY + AGL +D+I+ ++ + N +
Sbjct: 292 KTKEALELLNEMVSKGLQPDIITYS---TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 348
Query: 206 CILSSYLMLGHLKEVGEIIDQW 227
+ L L +E ID +
Sbjct: 349 LYNAIILGLCKRRETHSAIDLF 370
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/264 (18%), Positives = 100/264 (37%), Gaps = 4/264 (1%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 66
+ + R +P+ + TY L+ G T A + + + + + + Y ++
Sbjct: 16 LDAARRLVAEMPVEPD-AYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILL 74
Query: 67 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
++ +++E++ K PDI TYN+ ++ +D +FL + G
Sbjct: 75 EATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGC 133
Query: 127 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 186
+ V Y ++ TA +AE + E + +T++ LI G +
Sbjct: 134 EPNTVSYNIVLKGLCTAERWEDAE-ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 192
Query: 187 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 246
++ + + S +Y +L ++ + + +D DI + N LL A
Sbjct: 193 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVSYNTLLTA 251
Query: 247 FSDVGLTEKANEFHMLLLQKNCAP 270
G + A E L K CAP
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAP 275
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
S +Y LLH + K +KA + + + + YN ++T G+V+ +
Sbjct: 205 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 264
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+ ++K K P + +YN I + + L+EM G D + Y
Sbjct: 265 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV-SKGLQPDIITY 315
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++ E+
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++K + PD TYN + +D+ +K +DEM+ + G D V Y L++ Y
Sbjct: 753 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-ERGIQPDLVTYNTLISGY 806
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 5/246 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+
Sbjct: 589 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 648
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K + PD+FTYN+ I+ N+ + + + MS G V Y L IY +
Sbjct: 649 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTAL--IYALSKKG 705
Query: 147 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y
Sbjct: 706 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 765
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +LG + E ++ID+ + D+ N L+ +S G + A ++
Sbjct: 766 TLMRGLCLLGRVDEARKLIDEMTERGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMN 824
Query: 266 KNCAPT 271
K PT
Sbjct: 825 KGFNPT 830
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + +KA E+FE + + + + Y ++ GQV++ + +E
Sbjct: 658 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 717
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ + PD+ YN I+S + + NID+ + + EM DD V Y L+
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD-VTYNTLMRGLCLLGR 776
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A E+ I Q +TY+ LI Y+ G+ + +LR+ + +M ++ +
Sbjct: 777 VDEARKLIDEMTERGI-QPDLVTYNTLISGYSMKGD------VKDALRI-RNEMMNKGFN 828
Query: 206 CILSSY 211
L +Y
Sbjct: 829 PTLLTY 834
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 479 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 531
Query: 77 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 120
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 532 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 591
Query: 121 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 160
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 592 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 651
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 652 LAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 711 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 763
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A TY L+ ++A +L + + + + + + YN +++ Y G V+
Sbjct: 758 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 817
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ E+ K P + TYN I D + + EM ++G + D Y++L+
Sbjct: 818 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM-VENGITPDDSTYISLI 873
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 107/225 (47%), Gaps = 8/225 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ + +G+ + ++Y E +P + ++ Y LL +KAE++F +++ +L
Sbjct: 324 IARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNEIRELSLPLTIS 383
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+M+ LY V + KV ++ ++++N+ IFTY L I + +I +++ L+ M
Sbjct: 384 ACNQMLLLYKRVSR-NKVVDILTLMEKENIKYSIFTYKLMIDLKVRSNDILGMEQVLNSM 442
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
++G ++ + YI+ AE ++ A + + L+ LYA LG
Sbjct: 443 K-ENGLEPNFTIQTMVAKFYISGCFTEKAEE--VINAMEVHVKANRHAVRSLLDLYAILG 499
Query: 181 NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
++++W K + +++ + ++ LGH++ EI D
Sbjct: 500 RPVDVERVWNLCAEPKLE----DFLAAIKAWSKLGHIERAEEIFD 540
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + + +A E+++ + + +S + Y+ +M + V+ V ++ E+
Sbjct: 180 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEM 239
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + V P++++Y + I D+ + L +M DSG D V + ++ + A
Sbjct: 240 EARGVKPNVYSYTICIRVLGQAARFDEAYQILGKME-DSGCKPDVVTHTVVIQVLCDAGR 298
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A+ + + S + +TY L+ G+ + +IW ++ +Y
Sbjct: 299 LSDAK-DVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYT 357
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HMLL 263
++ + +G L E + D+ K+ S S N L+ F + ++A E HM
Sbjct: 358 AVVDALCQVGRLDEALAVFDEMKEKGISPEQYSY-NSLISGFLKADMFDRALELFNHM-- 414
Query: 264 LQKNCAPT 271
C P+
Sbjct: 415 --NACGPS 420
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 9/209 (4%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F+GL +S KT +Y +L+ + AE+LF +K+ + YN ++
Sbjct: 764 FKGLGVSLKTG-SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSM 822
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ-VKKFLDEMSCDSGGSDDWVK 132
++E++ V E+ RK TYN IS + ++Q + + + MS G S
Sbjct: 823 RIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS--EGFSPTPCT 880
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
Y L++ + A +V+AE + E + + Y+ L+ + GN + + QI++
Sbjct: 881 YGPLLDGLLKAGKMVDAE-NLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFE-- 937
Query: 193 RMTKQKMTS--RNYICILSSYLMLGHLKE 219
+M +Q + ++Y ++ + G L +
Sbjct: 938 KMVEQGINPDIKSYTVLIDTLCTAGRLND 966
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 4/196 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TY LL A AE LF + + N +YN ++ + G E V
Sbjct: 875 SPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQ 934
Query: 81 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
+ E++ + + PDI +Y + I + C A D + F + + G D + Y NL+
Sbjct: 935 IFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLL--ELGLEPDLIIY-NLLID 991
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ S + E +K TY+ LI+ G + Q+++ L + K
Sbjct: 992 GLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKP 1051
Query: 200 TSRNYICILSSYLMLG 215
Y ++ Y + G
Sbjct: 1052 NVFTYNALIRGYSVSG 1067
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 41/95 (43%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ++ Y + + KA + +E +K + + N +++ G++ V E+
Sbjct: 425 THVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYEL 484
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K V PD TY + I C+ D+ F +M
Sbjct: 485 KDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 519
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 32 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 91
HL K E A +LF + K +S YN ++ + ++ + E+KR
Sbjct: 747 HLCKHKKALE-AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 805
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
PD FTYNL + + ++ I+++ + EM G +V Y +++ + + L A
Sbjct: 806 PDEFTYNLILDAMGKSMRIEEMLRVQAEMH-RKGYESTYVTYNTIISGLVKSKRLEQA 862
>gi|225447241|ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 10/273 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K F + G R P TY +L+ +++G ++A + +++ L +
Sbjct: 572 KAFSLFKGMRNHGTWP----NESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTF 627
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
+ ++ Y +G++ V EE+ R V P+ Y I+ + T N+++ + +M
Sbjct: 628 SAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMD- 686
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGN 181
+ G S + + +L+ Y L A+ TL E K + + + +I LYA LG
Sbjct: 687 EFGISANQIVLTSLIKAYSKVGCLEGAK--TLYEGMKDLEGGPDIVASNSMINLYADLGL 744
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ I+ LR K ++ ++ Y LG L E ++ D+ KQS D ++ N
Sbjct: 745 VSEAKLIFDDLRQ-KGSADGVSFATMMYLYKNLGMLDEAIDVADEMKQSGLLR-DCASFN 802
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+++ ++ G E ++ + P +
Sbjct: 803 KVMACYATNGQLSACGELLHEMISRRILPDTGT 835
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 113/242 (46%), Gaps = 4/242 (1%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G + + TY L+ LY A + A ++F + + ++ + + +N M+ S G
Sbjct: 336 DGSRRKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGH 395
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ + ++ E++ + + PD TYN+++S A NID K ++ + G D V +
Sbjct: 396 LSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIR-EVGLFPDVVTHR 454
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
++++ + ++V + + E ++S + + +I +Y G DK +I+ +
Sbjct: 455 AVLHV-LCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHL 512
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
+ +++SR + I+ +Y G E E + K+ D+ N ++ A+ L +
Sbjct: 513 LEDELSSRTRVAIIDAYAEKGLWAEA-ENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYD 571
Query: 255 KA 256
KA
Sbjct: 572 KA 573
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++ +++LY ++A ++ + +KQS L + +N++M Y + GQ+ ++ E+
Sbjct: 765 SFATMMYLYKNLGMLDEAIDVADEMKQSGLLRDCASFNKVMACYATNGQLSACGELLHEM 824
Query: 86 KRKNVVPDIFTYNLWISSC-AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ ++PD T+ + + L + V + E S G + + + +++ T
Sbjct: 825 ISRRILPDTGTFKVMFTVLKKGGLPTEAVTQL--ESSYQEG--KPYARQAVITSVFSTVG 880
Query: 145 -HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
H ES T + AE + Y+ I Y G+ DK +++ ++ +
Sbjct: 881 LHAFALESCETFLNAEVDLDSS---FYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLV 937
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWK 228
YI + Y G L+ + I Q K
Sbjct: 938 TYINLAGCYGKAGMLEGLKRIYSQLK 963
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ A+ TE+ +E F+ + N+ N ++YN ++ Y G++ + E++
Sbjct: 625 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 684
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K K + P+ TY I + +++ K +EM + G + Y L++ Y
Sbjct: 685 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQ 743
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 202
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 744 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 802
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
+I G+LK+ G +++ +K S ++
Sbjct: 803 EFI--------YGYLKQ-GGVLEAFKGSDEENY 826
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ S TYT+L+ + E+A+ LFE ++ L N Y ++ Y +GQ+ KV
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 749
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+ KNV P+ TY + I A N+ + + L+EM + G D + Y + Y
Sbjct: 750 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGY 808
Query: 141 ITASHLVNA 149
+ ++ A
Sbjct: 809 LKQGGVLEA 817
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+T ++ + E+A +LF +++++ ++ N + +N ++ G+ ++ + E++
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + P + TY++ + I L EM+ G + + Y NL++ +I A L
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 147 VNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTS 201
A +V S+T TY+ LI Y G D +++ K S+ + +
Sbjct: 395 NKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451
Query: 202 RNYICILSSYLML-GHLKEVGEII 224
+ IC+L S+LM L+ VGE++
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEML 475
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+ G K ++A + + + L + Y+ ++ ++ +VE+ ++
Sbjct: 555 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 614
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++PD++TY++ I C ++ ++F DEM + V Y +L+ Y +
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGR 673
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A K I+ TY LI + + ++ +++ +RM + +Y
Sbjct: 674 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 206 CILSSYLMLGHLKEV 220
++ Y LG + +V
Sbjct: 733 ALIDGYGKLGQMVKV 747
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 101/227 (44%), Gaps = 4/227 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEE 84
+YT+L+ +A + +A +F+++++ + YN ++ ++ +G K+ +VE+
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K + PD +TYN I+ C + + +EM +G S D V Y L+++Y S
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGFSYDKVTYNALLDVY-GKS 327
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
H L E + +TY+ LI YA G D+ ++ + K Y
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+LS + G ++ I ++ + + +I N + + + G
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKP-NICTFNAFIKMYGNRG 433
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 3/250 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + TY L+ ++A ++FE +K + S++ + YN ++ +Y + ++
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+ E+ P I TYN IS+ A +D+ + ++M+ + G D Y L++ +
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA-EKGTKPDVFTYTTLLSGF 394
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A V + S E + + T++ I +Y G ++ +I+ + +
Sbjct: 395 ERAGK-VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ +L+ + G EV + + K++ + N L+ A+S G E+A +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQAMTVY 512
Query: 261 MLLLQKNCAP 270
+L P
Sbjct: 513 RRMLDAGVTP 522
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 26 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
TY +L+++ G W K L E++K ++ +A YN ++T ++ A V E
Sbjct: 245 TYNVILNVFGKMGTPWN-KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE 303
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+K D TYN + + + K L+EM + G S V Y +L++ Y
Sbjct: 304 EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNSLISAYARD 362
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L A AEK T+ TY L+ + G + I++ +R K
Sbjct: 363 GMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN--- 418
Query: 204 YICILSSYLML----GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
IC ++++ + G E+ +I D+ S DI N LL F G+
Sbjct: 419 -ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP-DIVTWNTLLAVFGQNGM 469
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+++++ + K+EE+ + + + + YN ++ Y ++ + + E+
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 86 KRKNVVPDIFTYNLWISSCAA 106
+ +VPD+ TYN +I S AA
Sbjct: 726 RNSGIVPDVITYNTFIGSYAA 746
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 2/168 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T +++ +Y + KA + + +K+ + + YN +M ++ K ++ EI
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PDI +YN I + + + EM +SG D + Y + Y S
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR-NSGIVPDVITYNTFIGSYAADSM 749
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
A + Q TY+ ++ Y L KD+ + LR
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQN-TYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL ++ + +F+ +K++ +N +++ Y G E+ V +
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V PD+ TYN +++ A +Q +K L EM D + + Y +L++ Y
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME-DGRCKPNELTYCSLLHAYANGKE 574
Query: 146 L 146
+
Sbjct: 575 I 575
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+AE F +K+ S + N M+++Y V K V++ +K + P + TYN +
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+ + + + ++ L E+ G D + Y ++ Y + + +A S E S
Sbjct: 672 YMHSRSADFGKSEEILREILA-KGIKPDIISYNTVIYAYCRNTRMRDA-SRIFSEMRNSG 729
Query: 162 TQRQWITYDFLIILYAG 178
ITY+ I YA
Sbjct: 730 IVPDVITYNTFIGSYAA 746
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ A+ TE+ +E F+ + N+ N ++YN ++ Y G++ + E++
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K K + P+ TY I + +++ K +EM + G + Y L++ Y
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQ 730
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 202
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 731 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
+I G+LK+ G +++ +K S ++
Sbjct: 790 EFI--------YGYLKQ-GGVLEAFKGSDEENY 813
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ S TYT+L+ + E+A+ LFE ++ L N Y ++ Y +GQ+ KV
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+ KNV P+ TY + I A N+ + + L+EM + G D + Y + Y
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGY 795
Query: 141 ITASHLVNA 149
+ ++ A
Sbjct: 796 LKQGGVLEA 804
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+T ++ + E+A +LF +++++ ++ N + +N ++ G+ ++ + E++
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + P + TY++ + I L EM+ G + + Y NL++ +I A L
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 147 VNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTS 201
A +V S+T TY+ LI Y G D +++ K S+ + +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 202 RNYICILSSYLML-GHLKEVGEII 224
+ IC+L S+LM L+ VGE++
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEML 462
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+ G K ++A + + + L + Y+ ++ ++ +VE+ ++
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++PD++TY++ I C ++ ++F DEM + V Y +L+ Y +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGR 660
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A K I+ TY LI + + ++ +++ +RM + +Y
Sbjct: 661 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 206 CILSSYLMLGHLKEV 220
++ Y LG + +V
Sbjct: 720 ALIDGYGKLGQMVKV 734
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
E AE++F ++K++ + YN ++++ G E+ + E++R VVP+I T+N
Sbjct: 98 ETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTL 157
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ + + + + D+G V Y LV +Y AS A +E +
Sbjct: 158 LMMHVQGGRLKEAAEVYQRI-LDAGLKPTVVTYTGLVQMYCRASKHKEA-IEVFLEMRRV 215
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ + Y +I +Y G+ ++ +++ L+ + C++ ++ G ++E+
Sbjct: 216 GCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEI 275
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
G ++ S D++ N ++GA+ G + +A + + +P S
Sbjct: 276 GAFFNEMLASGCLP-DLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVS 328
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TYT L+ +Y A ++A E+F +++ + ++Y+ M+++Y G E+ ALV
Sbjct: 184 PTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALV 243
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+++ +P++ T+ I + + ++ F +EM SG D Y ++ Y
Sbjct: 244 FRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEM-LASGCLPDLTLYNVMMGAYG 302
Query: 142 TASHLVNA 149
H V A
Sbjct: 303 RYGHSVQA 310
>gi|297839237|ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333341|gb|EFH63759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 989
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 23 TSETYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+S T A++ +YA W E + + + + L YN M+ Y EK +
Sbjct: 475 SSTTLAAVMDVYAEKGLWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSI 534
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ +K + PD TYN I A +D ++ L EM DSG Y L+ Y+
Sbjct: 535 FKGMKNQGTWPDECTYNSLIQMLAGVDLVDDAQRILAEM-LDSGCKPGCKTYAALIASYV 593
Query: 142 TASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L +A L EA +K+ + + Y LI G +++ + ++ ++
Sbjct: 594 RLGLLSDA--VDLYEAMKKTGVKPNEVVYGSLI---NGFAESGMVEEAIQYFKLMEEHGV 648
Query: 201 SRNYICILS---SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
N+I + S +Y +G L+E + D+ K S D++A N +L +D+G+ +A
Sbjct: 649 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSGGGP-DVAASNSMLSLCADLGIVSEA 706
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P + + T+ L+ LY A A LF + +S + + + +N M+ + G + +
Sbjct: 296 PRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 355
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 116
++++++ K + PD TYN+ +S A +I+ K+
Sbjct: 356 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALKY 394
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/114 (19%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +L++ +A + E+A + F+ +++ + N ++ ++ Y VG +E+ V +++K
Sbjct: 620 YGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 679
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
PD+ N +S CA + + + +++ G+ D + + ++ +Y
Sbjct: 680 DSGGGPDVAASNSMLSLCADLGIVSEAESIFNDLR--EKGTCDVISFATMMYLY 731
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
++AE L +++ + +Y+ MM Y +G EK +V + +K P + +Y
Sbjct: 395 DRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCL 454
Query: 101 ISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 158
I+ + +V K L+ +M +G + Y L+N ++ NA + +
Sbjct: 455 IN---MYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNA-FTVFEDVI 510
Query: 159 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 218
K + + Y+ +I + G+GN D+ + K ++ + + TSR ++ I+ + G ++
Sbjct: 511 KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMR 570
Query: 219 EVGEIIDQWKQSA 231
EI D ++S
Sbjct: 571 RALEIFDMMRRSG 583
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT +++ YA T KA E F +++ L + Y ++ G+++ V E+
Sbjct: 625 TYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREM 684
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+N+ + F YN+ I A ++ + + +M G D Y + +N A
Sbjct: 685 SAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-QEGVQPDIHTYTSFINACCKAGD 743
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ A + T+ E E + TY LI +A +K + ++ +++ K Y
Sbjct: 744 MLRA-TKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYH 802
Query: 206 CILSSYL 212
C+++S L
Sbjct: 803 CLMTSLL 809
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
TS T+ ++H +A A +A E+F+ +++S +N ++ + Q+EK ++
Sbjct: 552 TSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEIL 611
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E+ V PD TY ++ AA + + ++ ++ + G D Y L+
Sbjct: 612 DEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLR-NEGLELDVFTYEALLKACCK 670
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ + +A + T + ++I + ++ Y+ LI +A G+ +W++ + +Q
Sbjct: 671 SGRMQSALAVTREMSAQNIPRNTFV-YNILIDGWARRGD------VWEAADLMQQ 718
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 8/270 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ + GI + ++Y + +PL + Y L+ A +KAEE+F+ +K L
Sbjct: 222 IARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKEIKDLCLRLTVT 281
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ N+M+ LY + KVA V+ ++++NV P FTY L I + ++ ++ ++EM
Sbjct: 282 LCNQMILLYKRIAP-GKVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVINEM 340
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL-VEAEKSITQRQWITYDFLIILYAGL 179
G + YI AE+ +EA+ S ++ L+ LYA L
Sbjct: 341 KA-YGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAAL 399
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
+ + +IW+ M + M +++ + ++ LG +++ E + +A
Sbjct: 400 NKPNDVARIWE---MCTEPMLE-DFLSAIKAWGELGLIEKAEETFEAM-ANAPEKLSSKY 454
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCA 269
N +L ++ L K +F + + C
Sbjct: 455 YNAMLNVYAQNKLLSKGKQFVERMCRDGCP 484
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 7 IHSGERYFEGLPLSAK--TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
I E FE + + + +S+ Y A+L++YA K K ++ ER+ + L ++
Sbjct: 433 IEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDA 492
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPD---IFT-YNLWISSCAATLNIDQVKKFLDEM 120
++ LY++ G+VEK + + +N PD +FT Y + A +I +K D +
Sbjct: 493 LINLYVNSGEVEKADSFLLNVAEEN--PDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRL 550
Query: 121 SCDSGGSDDWVKYVNLVNIYITA 143
+ G + + Y L+ Y+ A
Sbjct: 551 K-NVGYAPRPLHYAVLLEAYVNA 572
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
+LLHLYA ++E + M + ++ + G++ + E +
Sbjct: 391 SLLHLYAALNKPNDVARIWEMCTEP-------MLEDFLSAIKAWGELGLIEKAEETFEAM 443
Query: 89 NVVPDIFT---YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P+ + YN ++ A + + K+F++ M C G + + + L+N+Y+ +
Sbjct: 444 ANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERM-CRDGCPNGPLTWDALINLYVNSGE 502
Query: 146 LVNAESSTLVEAEKSITQRQWIT-YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A+S L AE++ ++ T Y FL+ YA G+ ++I+ L+ +Y
Sbjct: 503 VEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHY 562
Query: 205 ICILSSYL 212
+L +Y+
Sbjct: 563 AVLLEAYV 570
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ A+ TE+ +E F+ + N+ N ++YN ++ Y G++ + E++
Sbjct: 601 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 660
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K K + P+ TY I + +++ K +EM + G + Y L++ Y
Sbjct: 661 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQ 719
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR---MTKQKMTSR 202
+V E L E ITY +I YA GN + ++ +R + +T +
Sbjct: 720 MVKVE-CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 778
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
+I G+LK+ G +++ +K S ++
Sbjct: 779 EFI--------YGYLKQ-GGVLEAFKGSDEENY 802
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ S TYT+L+ + E+A+ LFE ++ L N Y ++ Y +GQ+ KV
Sbjct: 666 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 725
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+ KNV P+ TY + I A N+ + + L+EM + G D + Y + Y
Sbjct: 726 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR-EKGIVPDSITYKEFIYGY 784
Query: 141 ITASHLVNA 149
+ ++ A
Sbjct: 785 LKQGGVLEA 793
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+T ++ + E+A +LF +++++ ++ N + +N ++ G+ ++ + E++
Sbjct: 252 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 311
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + P + TY++ + I L EM+ G + + Y NL++ +I A L
Sbjct: 312 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSL 370
Query: 147 VNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQKMTS 201
A +V S+T TY+ LI Y G D +++ K S+ + +
Sbjct: 371 NKAIEIKDLMVSKGLSLTSS---TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 427
Query: 202 RNYICILSSYLML-GHLKEVGEII 224
+ IC+L S+LM L+ VGE++
Sbjct: 428 TSVICLLCSHLMFDSALRFVGEML 451
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+ G K ++A + + + L + Y+ ++ ++ +VE+ ++
Sbjct: 531 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 590
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++PD++TY++ I C ++ ++F DEM + V Y +L+ Y +
Sbjct: 591 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGR 649
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A K I+ TY LI + + ++ +++ +RM + +Y
Sbjct: 650 LSMALELREDMKHKGISPNSA-TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 708
Query: 206 CILSSYLMLGHLKEV 220
++ Y LG + +V
Sbjct: 709 ALIDGYGKLGQMVKV 723
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 106/245 (43%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + A + AE L +++ + + + +N ++ G++E + +E+
Sbjct: 192 TYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM 251
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ + PD +YN +S + + EM+ G D V + +L++ A +
Sbjct: 252 AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA-QKGVVPDVVTFTSLIHAMCRAGN 310
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A + E+ + ++ T+ LI + G D K +R + + + Y
Sbjct: 311 LERAVALVGQMRERGLRMNEF-TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYN 369
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+++ Y LG + E E+I + + D+ + +L + +G T+ A E + +L+
Sbjct: 370 VLINGYCKLGRMDEARELIHEMEAKGMKP-DVVTYSTILSGYCKIGDTDSAFELNRKMLK 428
Query: 266 KNCAP 270
K P
Sbjct: 429 KGVVP 433
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+ + A ELFE++ Q L + Y ++ + G V+K + +E+
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K V+PD+ TY++ I + + + ++ L ++ + D+ +KY L++ TA
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN-IKYEALMHCCRTA 553
>gi|357458279|ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 511
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAE-ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
S TY +++ Y A E+ E L + ++ N + N ++ Y + G+++K+
Sbjct: 238 SVTYNSIIDGYGKAGMFEQMENSLTDMIENENCQPDVFTLNSLIGSYGNGGKIDKMEKWY 297
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E + ++ PDI T+N+ I S D++K +D M + V Y ++ +Y
Sbjct: 298 DEFQLMSIKPDIKTFNMMIKSYGKAGMYDKMKSVMDFME-RRFFAPTIVTYNTVIEVYGK 356
Query: 143 ASHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
A + + + K I + +TY L+ Y+ G KID I + + + + +
Sbjct: 357 AGEIEKMDKH--FKNMKHIGMKPNSVTYCSLVNAYSKAGLIRKIDSILRHVENSDVILDT 414
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
+ CI+S+Y +G LK++GE+ + + + D + ++ A++ G+TE A
Sbjct: 415 PFFNCIISAYGQVGDLKKMGELFLAMR-ARKCEPDRTTFTCMIQAYNTQGITEAAKNLET 473
Query: 262 LLL 264
+++
Sbjct: 474 MMI 476
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TYT LL + + K ++A +L+E + L + +++ Y G +E+
Sbjct: 133 QTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAFSTIED 192
Query: 85 IKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K + PD++TY++ IS CA D +++ L +MS SG + V Y ++++ Y A
Sbjct: 193 MKSVVDCKPDVYTYSVLISCCAKFRRFDLIERVLADMS-YSGIECNSVTYNSIIDGYGKA 251
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
E+S E Q T + LI Y G DK+++ + ++ K +
Sbjct: 252 GMFEQMENSLTDMIENENCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKT 311
Query: 204 YICILSSYLMLGHLKEVGEIID 225
+ ++ SY G ++ ++D
Sbjct: 312 FNMMIKSYGKAGMYDKMKSVMD 333
>gi|295828268|gb|ADG37803.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M +G + V Y + + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIVAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 137
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 120/299 (40%), Gaps = 44/299 (14%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F LP ++T+ +YT+L+ YA E+A EL +++K S ++ A YN ++
Sbjct: 159 FHDLPSESRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACARAT 218
Query: 74 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 219 DPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTM-LEAGV 277
Query: 127 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLV--EAEKSI 161
D Y ++V+ + A +L E+ TLV AE
Sbjct: 278 LPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVA 337
Query: 162 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 212
RQ TY L+ LY G D + ++++ +R T T+ Y + +
Sbjct: 338 VLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTA-TYNVLFRVFG 396
Query: 213 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
G KEV E+ S DI C ++ A GL E A E + + PT
Sbjct: 397 DGGFFKEVVELFQDMLHSEVEP-DIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPT 454
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 102/247 (41%), Gaps = 12/247 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y A++ Y GA + A L V + +A YN ++ G+ V+E++
Sbjct: 137 YNAMVAGYCGAGQLDAARRL---VADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMF 193
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R+ +PD+ TY + + + Q K LDEM D G + D V Y N+V I
Sbjct: 194 RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH-DKGCAPDIVTY-NVVLNGICQEGR 251
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
V L + ++Y+ I+ GL ++ + K + K N +
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYN---IVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308
Query: 207 --ILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+L S+L L E E+++Q Q + +S N LL AF KA EF L+
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSY-NPLLHAFCKQKKIHKAMEFVELM 367
Query: 264 LQKNCAP 270
+ + C P
Sbjct: 368 VSRGCYP 374
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 5/166 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ E A E+ E++ Q + N+L YN ++ + ++ K VE +
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PDI +YN +++ +D + L ++ D G S + Y N V +T +
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK-DKGCSPVLISY-NTVIDGLTKAG 425
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
L E Q ITY + +GL +D+I++ ++
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYS---TIASGLCREDRIEEAVRT 468
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S +Y LLH + K KA E E + + + YN ++T G+V+ ++
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLH 400
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
++K K P + +YN I + + LDEM+ G D + Y
Sbjct: 401 QLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT-SKGLQPDIITY 449
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 20/252 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y A++ Y GA + A L V + + +A YN ++ G+ V++E+
Sbjct: 128 AYNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 184
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ VPD+ TY + + + Q K LDEM D G + D V Y +VN
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR-DKGCTPDIVTYNVVVNGICQEGR 243
Query: 146 LVNAESSTLVEAEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ +A +E K++ + ++Y+ I+ GL ++ + + + QK
Sbjct: 244 VDDA-----IEFLKNLPSYGCEPNTVSYN---IVLKGLCTAERWEDAEELMGEMGQKGCP 295
Query: 202 RNYIC--ILSSYLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
N + +L S+L L E E+++Q + + +S N LL AF +KA
Sbjct: 296 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSY-NPLLHAFCKQKKMDKAMA 354
Query: 259 FHMLLLQKNCAP 270
F L++ + C P
Sbjct: 355 FLDLMVSRGCYP 366
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y +L A+ E AEEL + Q N + +N +++ G VE V+E+I
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ P+ +YN + + +D+ FLD M G D V Y L+
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV-SRGCYPDIVSYNTLL 375
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 8/182 (4%)
Query: 10 GERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
GE +G P + T + L+ E A E+ E++ + + N+L YN ++ +
Sbjct: 287 GEMGQKGCPPNVVT---FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 343
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+++K ++ + + PDI +YN +++ + +D + L ++ D G +
Sbjct: 344 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK-DKGCAPV 402
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ Y N V +T + L E Q ITY + AGL +D+I+
Sbjct: 403 LISY-NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS---TIAAGLCREDRIEDAI 458
Query: 190 KS 191
++
Sbjct: 459 RA 460
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 93/245 (37%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ G T A + + + + + + Y ++ ++ +++E+
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K PDI TYN+ ++ +D +FL + G + V Y ++ TA
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP-SYGCEPNTVSYNIVLKGLCTAER 278
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+AE + E + +T++ LI G + ++ + + S +Y
Sbjct: 279 WEDAE-ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 337
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L ++ + + +D DI + N LL A G + A E L
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYP-DIVSYNTLLTALCRSGEVDVAVELLHQLKD 396
Query: 266 KNCAP 270
K CAP
Sbjct: 397 KGCAP 401
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 122/281 (43%), Gaps = 10/281 (3%)
Query: 1 MTKVFGIHS----GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSN 54
M ++ G S + F+ +P+ + + YT +LH YA ++A +LF ++K+
Sbjct: 186 MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIG 245
Query: 55 LSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 113
L + YN M+ +Y +G+ +++ +++E++ K + D FT + IS+C +D+
Sbjct: 246 LDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEA 305
Query: 114 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
+KFL E+ + G V Y +++ ++ A A S L E E + +TY+ L
Sbjct: 306 RKFLAELKFN-GYKPGTVTYNSMLQVFGKAGIYTEA-LSILKEMEDNNCPPDSVTYNELA 363
Query: 174 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y G D+ + ++ + Y ++ +Y G + + K +
Sbjct: 364 ATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCA 423
Query: 234 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++ N +L TE + + CAP A+
Sbjct: 424 P-NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRAT 463
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 2/198 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ Y A + A LF +K + N YN ++ + + E V V+ E+
Sbjct: 393 TYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 452
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P+ T+N ++ C+ + V K L EM + G D + L++ Y
Sbjct: 453 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMK-NCGFEPDKDTFNTLISAYARCGS 511
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V++ + E KS TY+ L+ A G+ + + + +R K +Y
Sbjct: 512 EVDS-AKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYS 570
Query: 206 CILSSYLMLGHLKEVGEI 223
+L Y G++K + ++
Sbjct: 571 LLLHCYSKAGNVKGIEKV 588
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ LY KAEE+ + ++ S + + YN ++ + G +++ V+ E+
Sbjct: 673 TYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEM 732
Query: 86 KRKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSC 122
K + P I TYN ++S A D +V +F+ E +C
Sbjct: 733 TTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNC 772
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 102/246 (41%), Gaps = 3/246 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL+ A + AE + + ++ N Y+ ++ Y G V+ + V +EI
Sbjct: 533 TYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEI 592
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+V P + + ++ +++ D++ G D V ++++++
Sbjct: 593 YDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQ-KYGYKPDLVVINSMLSMFARNKM 651
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A E + Q TY+ L+ LY G K +++ K ++ + + +Y
Sbjct: 652 FSKAREMLHFIHECGL-QPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYN 710
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ + G ++E ++ + I N L ++ + L ++ANE +++
Sbjct: 711 TVIKGFCRKGLMQEAIGVLSEMTTKGIQP-TIVTYNTFLSGYAGMELFDEANEVIRFMIE 769
Query: 266 KNCAPT 271
NC P+
Sbjct: 770 HNCRPS 775
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 38/215 (17%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
++L ++A K KA E+ + + L N YN +M LY+ G+ K V++ I+
Sbjct: 641 SMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNS 700
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
PD+ +YN I K F C G L+
Sbjct: 701 GPEPDVVSYNTVI------------KGF-----CRKG--------------------LMQ 723
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
L E Q +TY+ + YAG+ D+ +++ + + + + Y ++
Sbjct: 724 EAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILV 783
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 243
Y G +E + + + K+ S FD + RL
Sbjct: 784 DGYCKAGKYEEAMDFVSKIKELDIS-FDDQSVKRL 817
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 6/260 (2%)
Query: 14 FEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
F+ +P + A+T YTA+++ Y + EL +KQ +S + L YN ++
Sbjct: 159 FDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACAR 218
Query: 72 VG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
G E + + E++ + + PD+ TYN + +CA D+ + M+ +SG D
Sbjct: 219 GGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMN-ESGIVPDI 277
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
Y LV + + L S L E E +Y+ L+ YA LG+ + +++
Sbjct: 278 NTYSYLVQTFGKLNRLEKV-SELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFR 336
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
++ + Y +L+ Y G +V +I + K S T D D N L+ F +
Sbjct: 337 QMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNT-DPDAGTYNILIQVFGEG 395
Query: 251 GLTEKANEFHMLLLQKNCAP 270
G ++ ++++N P
Sbjct: 396 GYFKEVVTLFHDMVEENVEP 415
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 101/248 (40%), Gaps = 37/248 (14%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ L +K E+F+ + + ++ +Y ++ Y GQ ++ +K
Sbjct: 139 YTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMK 198
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
++ V P I TYN I++CA G DW + L
Sbjct: 199 QERVSPSILTYNTVINACAR-------------------GGLDWEGLLGL---------- 229
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
E Q ITY+ L+ A G D+ + +++++ + Y
Sbjct: 230 -------FAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSY 282
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ ++ L L++V E++ + +S + DI++ N LL A++++G ++A + +
Sbjct: 283 LVQTFGKLNRLEKVSELLREM-ESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAA 341
Query: 267 NCAPTNAS 274
C A+
Sbjct: 342 GCVANAAT 349
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 99/245 (40%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL YA ++A ++F +++ + NA Y+ ++ LY G+ + V + E+
Sbjct: 314 SYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEM 373
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K N PD TYN+ I +V +M + + Y L+
Sbjct: 374 KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM-VEENVEPNMETYEGLIFACGKGGL 432
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+A+ L EK I Y +I + ++ ++ ++ T Y
Sbjct: 433 YEDAKKILLHMNEKGIVPSSK-AYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYN 491
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+ ++ G KE I+ + +S D+ + N ++ AF G E+A + ++ + +
Sbjct: 492 SFIHAFARGGLYKEAEAILSRMNESGLKR-DVHSFNGVIKAFRQGGQYEEAVKSYVEMEK 550
Query: 266 KNCAP 270
NC P
Sbjct: 551 ANCEP 555
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 35/136 (25%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------- 61
S T ETY + +H +A ++AE + R+ +S L SFN ++
Sbjct: 483 SNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAV 542
Query: 62 --YNEM---------------MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 104
Y EM +++Y S G V++ +EIK ++P + Y L ++
Sbjct: 543 KSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALY 602
Query: 105 AATLNIDQVKKFLDEM 120
A ++ +DEM
Sbjct: 603 AKNDRLNDAYNLIDEM 618
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++ E+
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++K + PD TYN + +D+ +K +DEM+ + G D V Y L++ Y
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-ERGIQPDLVTYNTLISGY 437
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 5/246 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+
Sbjct: 220 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 279
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K + PD+FTYN+ I+ N+ + + + MS G V Y L IY +
Sbjct: 280 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTAL--IYALSKKG 336
Query: 147 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y
Sbjct: 337 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 396
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +LG + E ++ID+ + D+ N L+ +S G + A ++
Sbjct: 397 TLMRGLCLLGRVDEARKLIDEMTERGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMN 455
Query: 266 KNCAPT 271
K PT
Sbjct: 456 KGFNPT 461
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + +KA E+FE + + + + Y ++ GQV++ + +E
Sbjct: 289 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 348
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ + PD+ YN I+S + + NID+ + + EM DD V Y L+
Sbjct: 349 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD-VTYNTLMRGLCLLGR 407
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A E+ I Q +TY+ LI Y+ G+ + +LR+ + +M ++ +
Sbjct: 408 VDEARKLIDEMTERGI-QPDLVTYNTLISGYSMKGD------VKDALRI-RNEMMNKGFN 459
Query: 206 CILSSY 211
L +Y
Sbjct: 460 PTLLTY 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 110 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 162
Query: 77 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 120
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 163 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 222
Query: 121 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 160
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 223 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 282
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 283 LAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 342 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 394
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
G EKA ++ + + + + Y +++T +VEK L+ +E+KR V PD+
Sbjct: 428 CGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDV 487
Query: 95 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 151
+TY + I S C A L I+Q + + DEM G S + V Y L++ Y+ + L+ A
Sbjct: 488 YTYTILIDSFCKAGL-IEQARSWFDEMR-SVGCSPNVVTYTALLHAYLKSKQLIQAHDIF 545
Query: 152 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+V+A +TY LI G K ++++ L T + S Y
Sbjct: 546 HRMVDAA---CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYF 596
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 32/250 (12%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTALLH Y +K +A ++F R+ + NA+ Y+ ++ G+++K V E++
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583
Query: 86 --KRKNVVPDI-FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
NV D F N +C N+ +D + C + D
Sbjct: 584 IGTSGNVESDFYFEGN---DTCTIAPNVVTYGALIDGL-CKAQKVSD------------- 626
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--T 200
A L++A + E + I YD LI + +G D +++ LRMTK +
Sbjct: 627 AHELLDAMLAAGCEPNQ-------IVYDALIDGFCKIGKIDNAQEVF--LRMTKCGYLPS 677
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y ++ G L +++ + + + ++ ++ S VG EKA
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNP-NVVTYTAMIDGLSKVGEIEKALNLL 736
Query: 261 MLLLQKNCAP 270
L+ +K C+P
Sbjct: 737 SLMEEKGCSP 746
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTA++ + EKA L +++ S N + Y ++ G+ + + +++
Sbjct: 715 TYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K P+ TY + I+ C A +D+ LDEM
Sbjct: 775 NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+L+ + A ++ + + + N + Y M+ VG++EK ++ +
Sbjct: 680 TYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLM 739
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K P++ TY I T D K +M+ G + ++V Y L+N A
Sbjct: 740 EEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMN-SKGCAPNYVTYRVLINHCCAAGL 798
Query: 146 LVNA 149
L A
Sbjct: 799 LDEA 802
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 112/253 (44%), Gaps = 11/253 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +LL +Y A+ ++A + + ++ + + YN +++ Y+ G +++ A + EE+
Sbjct: 286 TFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEM 345
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K + PD+ TY IS ID DEM +G + Y L+ + H
Sbjct: 346 EVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEM-LRNGCKPNLCTYNALIKL-----H 399
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
V + ++ + + +T++ L+ ++ G ++ ++K ++ +
Sbjct: 400 GVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPER 459
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y+ ++SSY G + EI + ++ DIS N +L A + G E+A +
Sbjct: 460 DTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYP-DISTYNAVLSALARGGRWEQAEKLFA 518
Query: 262 LLLQKNCAPTNAS 274
+ +C P S
Sbjct: 519 EMENLDCRPDELS 531
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ TY +L+H+Y+ EK E + +K S + YN M+ Y GQ+++ + +
Sbjct: 633 STATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLF 692
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E+K ++PDI TYN+++ S A ++ + M G + Y +++ Y
Sbjct: 693 SEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYM-VTRGCKPNERTYNSILQEYCR 751
Query: 143 ASHLVNAES--STLVEAEKSITQRQ 165
+ +A+S S L + I++++
Sbjct: 752 HGKIADAKSFLSNLPQLHPGISKQE 776
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A++ +Y + +K EE+ +K S+++ + YN +M +Y +G EK ++ EIK
Sbjct: 604 AMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSS 663
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
PD ++YN I + + + + EM SG D V Y V Y+ S
Sbjct: 664 GARPDRYSYNTMIYAYGRKGQMKEASRLFSEMK-SSGLIPDIVTYNIFVKSYVANS 718
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVV 82
+ YTAL+ ++ A A +F R+ + + + YN ++ +Y + + V +V
Sbjct: 178 ASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALV 237
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ +K + D +TYN IS C + K DEM +G D V + +L+++Y
Sbjct: 238 DSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRA-AGFEPDKVTFNSLLDVYGK 296
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
A + + L E E +TY+ LI Y G
Sbjct: 297 A-RMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDG 333
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 110/249 (44%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY A+L A G +W E+AE+LF ++ + + L Y+ ++ Y + +++K+ + E+
Sbjct: 496 TYNAVLSALARGGRW-EQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSED 554
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA- 143
I + + + + N+ + +K E+ D +N++N ++
Sbjct: 555 IYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLD-----INVLNAMVSVY 609
Query: 144 --SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ +V L + S TY+ L+ +Y+ LG+ +K + I ++ + +
Sbjct: 610 GKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDR 669
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
+Y ++ +Y G +KE + + K S DI N + ++ + E+A +
Sbjct: 670 YSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIP-DIVTYNIFVKSYVANSMFEEAIDLVR 728
Query: 262 LLLQKNCAP 270
++ + C P
Sbjct: 729 YMVTRGCKP 737
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 111/259 (42%), Gaps = 12/259 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G+PL TY L+ ++A ++F+ ++ + + + +N ++ +Y
Sbjct: 243 DGIPLD---RYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARM 299
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
++ V++E++ P + TYN ISS + + + +EM G D + Y
Sbjct: 300 HDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEV-KGIQPDVITYT 358
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L++ A ++A T E ++ + TY+ LI L+ G ++ ++ LR
Sbjct: 359 TLISGLDRAGK-IDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRS 417
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA---TSDFDISACNRLLGAFSDVG 251
+ +L+ + G EV + + K+S D +S L+ ++S G
Sbjct: 418 AGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVS----LISSYSRCG 473
Query: 252 LTEKANEFHMLLLQKNCAP 270
L +++ E + +++ P
Sbjct: 474 LFDQSMEIYKRMIEAGIYP 492
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A++ +Y +K EE+ +K+S+++ + YN +M +Y +G EK ++ EIK
Sbjct: 602 AMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSS 661
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
PD ++YN I + + + + EM C SG D V Y V Y+ S
Sbjct: 662 RARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKC-SGLVPDIVTYNIFVKSYVANS 716
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ TY +L+H+Y+ EK E + +K S + YN M+ Y GQ+++ + +
Sbjct: 631 STATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLF 690
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E+K +VPDI TYN+++ S A ++ + M G + Y ++ Y +
Sbjct: 691 SEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYM-VTHGCKPNERTYNTILQEYCS 749
Query: 143 ASHLVNAES--STLVEAEKSITQRQ 165
+ + +S S L E I++R+
Sbjct: 750 HGRIADGKSFISNLPELHPGISKRE 774
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 106/238 (44%), Gaps = 11/238 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T +LL +Y A+ ++A + + ++Q + + YN +++ Y+ G +E+ + EE+
Sbjct: 284 TLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEM 343
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K + PD+ TY +S ID +EM +G + Y L+ + H
Sbjct: 344 EVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEM-LRNGCKPNLCTYNALIKL-----H 397
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
V + ++ I + +T++ L+ ++ G ++ ++K ++ +
Sbjct: 398 GVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPER 457
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
Y+ ++SSY G + EI + ++ DIS N +L A + G E+A +
Sbjct: 458 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHP-DISTYNAVLSALARGGRWEQAEKL 514
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ YTAL+ + A A +F R+ + + + YN ++ +Y + K L +
Sbjct: 176 ASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALV 235
Query: 84 EIKRKNVVP-DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ RK+ +P D +TYN IS C + K DEM +G D V +L+++Y
Sbjct: 236 DSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRA-AGFEPDKVTLNSLLDVYGK 294
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
A A L E E+ +TY+ LI Y G
Sbjct: 295 ARRYDEA-IGVLKEMEQGGCPPSVVTYNSLISSYVKDG 331
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 113/242 (46%), Gaps = 17/242 (7%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ Y+ ++A E+++R+ ++ + + YN +++ G+ E+ + E
Sbjct: 458 DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAE 517
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + PD +Y+ + + A +D++K D + + + N +
Sbjct: 518 MENLDSRPDELSYSSLLHAYANAKKLDKMKSL---------SEDIYAERIESHNGLVKTL 568
Query: 145 HLVNAESSTLVEAEKSITQ--RQWITYDF-----LIILYAGLGNKDKIDQIWKSLRMTKQ 197
LVN++ + L + EK+ + R+ + D +I +Y G K+++I ++ +
Sbjct: 569 VLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSI 628
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
+++ Y ++ Y LG ++ I+ + K S+ + D + N ++ A+ G ++A+
Sbjct: 629 NLSTATYNSLMHMYSRLGDCEKCENILTEIK-SSRARPDRYSYNTMIYAYGRKGQMKEAS 687
Query: 258 EF 259
Sbjct: 688 RL 689
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 113/259 (43%), Gaps = 12/259 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G+PL TY L+ ++A ++F+ ++ + + + N ++ +Y +
Sbjct: 241 DGIPLD---RYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARR 297
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
++ V++E+++ P + TYN ISS +++ + +EM G D + Y
Sbjct: 298 YDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEV-KGIEPDVITYT 356
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
LV+ A ++A T E ++ + TY+ LI L+ G ++ ++ +R
Sbjct: 357 TLVSGLDRAGK-IDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRS 415
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA---TSDFDISACNRLLGAFSDVG 251
+ +L+ + G EV + + K+S D +S L+ ++S G
Sbjct: 416 AGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVS----LISSYSRCG 471
Query: 252 LTEKANEFHMLLLQKNCAP 270
L ++A E + +++ P
Sbjct: 472 LFDQAMEIYKRMIEAGIHP 490
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 7/232 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL ++ + +F+ +K+S Y +++ Y G ++ + + +
Sbjct: 424 TWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRM 483
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-SCDSGGSDDWVKYVNLVNIYITAS 144
+ PDI TYN +S+ A +Q +K EM + DS D + Y +L++ Y A
Sbjct: 484 IEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDS--RPDELSYSSLLHAYANAK 541
Query: 145 HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L +S S + AE+ + + L+++ + + N ++ + LR + +
Sbjct: 542 KLDKMKSLSEDIYAERIESHNGLVK--TLVLVNSKVNNLSDTEKAFLELRRRRCSLDINV 599
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
++S Y G +K+V EI+ K+S+ + + N L+ +S +G EK
Sbjct: 600 LNAMISIYGKNGMVKKVEEILSLMKESSI-NLSTATYNSLMHMYSRLGDCEK 650
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 9/214 (4%)
Query: 7 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
I ER F + ++ TY+ ++ + +A ++F + NA+ +N
Sbjct: 231 ISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 290
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SC 122
+M +++ G+ EKV V ++KR PD TYN I S N+++ K L+ + C
Sbjct: 291 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC 350
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ S N + I+ VN+ + + + +TY+ L+ ++A +
Sbjct: 351 NLNASS-----FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 405
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 216
D + ++ K + + + + Y ++S++ +GH
Sbjct: 406 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 439
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/233 (15%), Positives = 90/233 (38%), Gaps = 40/233 (17%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A+ F+ +K + ++Y ++ + G + + V E+K + P+++TY++ I
Sbjct: 199 EAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVI 257
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+ + I + EM D G + + + NL+ +++ A
Sbjct: 258 DALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKA------------------ 298
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
G +K+ Q++ ++ + Y ++ S+ +L+E
Sbjct: 299 ------------------GRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 340
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+I++ K+ + + S+ N + G S +G A+ + C P +
Sbjct: 341 KILNSVKKGC--NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVT 391
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++ E+
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++K + PD TYN + +D+ +K +DEM+ + G D V Y L++ Y
Sbjct: 758 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-ERGIQPDLVTYNTLISGY 811
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 5/246 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+
Sbjct: 594 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 653
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K + PD+FTYN+ I+ N+ + + + MS G V Y L IY +
Sbjct: 654 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTAL--IYALSKKG 710
Query: 147 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y
Sbjct: 711 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 770
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +LG + E ++ID+ + D+ N L+ +S G + A ++
Sbjct: 771 TLMRGLCLLGRVDEARKLIDEMTERGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMN 829
Query: 266 KNCAPT 271
K PT
Sbjct: 830 KGFNPT 835
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + +KA E+FE + + + + Y ++ GQV++ + +E
Sbjct: 663 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 722
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ + PD+ YN I+S + + NID+ + + EM DD V Y L+
Sbjct: 723 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD-VTYNTLMRGLCLLGR 781
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A E+ I Q +TY+ LI Y+ G+ + +LR+ + +M ++ +
Sbjct: 782 VDEARKLIDEMTERGI-QPDLVTYNTLISGYSMKGD------VKDALRI-RNEMMNKGFN 833
Query: 206 CILSSY 211
L +Y
Sbjct: 834 PTLLTY 839
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 484 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 536
Query: 77 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 120
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 537 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 596
Query: 121 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 160
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 597 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 656
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 657 LAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 716 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 768
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 123/281 (43%), Gaps = 10/281 (3%)
Query: 1 MTKVFGIHS----GERYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSN 54
M ++ G S + F+ +P+ + + YT +LH YA + ++A +LF++++
Sbjct: 187 MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIG 246
Query: 55 LSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 113
L + YN M+ +Y +G+ ++ +++E++ K + D FT + IS+C +D+
Sbjct: 247 LDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEA 306
Query: 114 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
+KFL E+ + G V Y +++ ++ A A S L E E + ITY+ L
Sbjct: 307 RKFLAELKLN-GYKPGTVMYNSMLQVFGKAGIYTEA-LSILKEMEDNNCPPDSITYNELA 364
Query: 174 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y G D+ + ++ + Y ++ +Y G + + + K +
Sbjct: 365 ATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCA 424
Query: 234 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++ N +L TE + + CAP A+
Sbjct: 425 P-NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRAT 464
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ Y A + A LF ++K + N YN ++ + + E V V+ E+
Sbjct: 394 TYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 453
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P+ T+N ++ C+ + V K L EM + G D + L++ Y
Sbjct: 454 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMK-NCGFEPDKDTFNTLISSYARCGS 512
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V++ + E KS TY+ L+ A G+ WK+ Q M ++ +
Sbjct: 513 EVDS-AKMYGEMVKSGFTPCVTTYNALLNALAHRGD-------WKAAESVIQDMQTKGFK 564
Query: 206 CILSSYLMLGH 216
+SY +L H
Sbjct: 565 PNETSYSLLLH 575
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ LY KAEE+ + ++ S + + YN ++ + G +++ V+ E+
Sbjct: 674 TYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEM 733
Query: 86 KRKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSC 122
K + P I TYN ++S A D +V +F+ E +C
Sbjct: 734 TTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNC 773
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 102/246 (41%), Gaps = 3/246 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL+ A + AE + + ++ N Y+ ++ Y G V + V +EI
Sbjct: 534 TYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEI 593
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V P + S ++ +++ D++ G D V ++++++ + +
Sbjct: 594 YDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQ-KYGYKPDLVVINSMLSMF-SRNK 651
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ + L + Q TY+ L+ LY K +++ K ++ + + +Y
Sbjct: 652 MFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYN 711
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ + G ++E ++ + I N L ++ + L ++ANE +++
Sbjct: 712 TVIKGFCRKGLMQEAIRVLSEMTTKGIQP-TIVTYNTFLSGYAGMELFDEANEVIRFMIE 770
Query: 266 KNCAPT 271
NC P+
Sbjct: 771 HNCRPS 776
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/225 (16%), Positives = 99/225 (44%), Gaps = 3/225 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y ++L ++ A +A + + ++ +N +++ YNE+ Y+ G +++ V++ +
Sbjct: 325 YNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMT 384
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K V+P+ TY I + D + +M D G + + Y +++ + S
Sbjct: 385 SKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMK-DLGCAPNVYTYNSVLAMLGKKSRT 443
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
+ L E + + T++ ++ + + G + ++++ + ++ + +
Sbjct: 444 EDV-IKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNT 502
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
++SSY G + ++ + +S + ++ N LL A + G
Sbjct: 503 LISSYARCGSEVDSAKMYGEMVKSGFTPC-VTTYNALLNALAHRG 546
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 2/207 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+ ++H + + ++AEEL +++ + +Y+ MM Y V +K +V E +K
Sbjct: 359 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLK 418
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
P I +Y I+ + + EM G + Y L+N +I
Sbjct: 419 ECGFKPTIISYGCLINLYVKVGKVPKAIAISKEME-SHGIKHNNKTYSMLINGFIHLHDF 477
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
NA S + KS Q Y+ L+ + +GN D+ +I++ ++ + + ++R +
Sbjct: 478 ANA-FSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRP 536
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATS 233
I+ + + G +K + +D ++S +
Sbjct: 537 IIEGFAVAGDMKRAFDTLDLMRRSGCA 563
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A TYT ++ YA + KA E F ++K+S L + +Y ++ G+++
Sbjct: 598 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 657
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V E+ + + + F YN+ I A ++ + L +M D G + + + +N
Sbjct: 658 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKED-GIPPNIHTFTSYINAC 716
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A + AE+ A+ + + T+ LI +A + D+ + ++ ++ K
Sbjct: 717 CKAGDMQRAENVIQEMADVGL-KPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPD 775
Query: 201 SRNYICILSSYL 212
Y C+++S L
Sbjct: 776 EAAYHCLVTSLL 787
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 113/292 (38%), Gaps = 36/292 (12%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y G
Sbjct: 243 FERIPKPSR--REFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAG 300
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN-------IDQVKKFLDEMS----- 121
+ VEE+K + + + TY++ IS T + + K LD ++
Sbjct: 301 DMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYS 360
Query: 122 ------CDSGGSDDWVKYVN---------LVNIYITASH---LVNAESSTLVEAEK---S 160
C SG D + V +++Y + H +V E L+ E+
Sbjct: 361 NIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKEC 420
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ I+Y LI LY +G K I K + K ++ Y +++ ++ L
Sbjct: 421 GFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANA 480
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
I + +S D + N L+ AF +G ++A + ++ P+N
Sbjct: 481 FSIFEDMIKSGLQP-DRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSN 531
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ T+ ++ +A A ++A + + +++S + + YN ++ + QVEK V+
Sbjct: 530 SNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVL 589
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+++ + P+ TY + + AA+ +I + ++ ++ +SG D Y L+
Sbjct: 590 DKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIK-ESGLKLDVYIYETLLRACCK 648
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ + +A + T + + I + +I Y+ LI +A G+ +W++ + KQ
Sbjct: 649 SGRMQSALAVTREMSFQKIPRNTFI-YNILIDGWARRGD------VWEAADLLKQ 696
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 43/101 (42%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A T TY AL+H EKA + +++ + ++ N Y +M Y + G + K
Sbjct: 563 APTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFE 622
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+IK + D++ Y + +C + + EMS
Sbjct: 623 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 663
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 3/248 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + E AE L ++ + N +++N M+ Y G V+ + +
Sbjct: 110 TYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAM 169
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ V DI+TYN +D+ K L M + G ++V Y L++I+
Sbjct: 170 EKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM-IEMGVVPNYVTYTTLISIHCKDGD 228
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+V A AEK T +TY+ +I YA G+ + ++ K + Y
Sbjct: 229 MVEARRLFREMAEKGATP-SVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYA 287
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ + + G + ++ ++ KQ T + ++ A L+ + G +E A + + +L+
Sbjct: 288 SLVHGHCVNGKVDVALKLFEEMKQRGT-EPNVVAYTALISGLAKEGRSEAAFQLYDDMLK 346
Query: 266 KNCAPTNA 273
P ++
Sbjct: 347 AGLIPDDS 354
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 4/246 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL++ + EKA ELF + +S S +A++Y +++ + G++ + V+ E+
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + PD YN I T +V + L EM ++G D + Y L+ Y + +
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEME-EAGLKPDTITYNTLI-AYASKNG 608
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNY 204
+ + + K+ TY +I Y GN ++ +I+K ++ +K + Y
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIY 668
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+++S +K +++ K + + + N + D EK EF ++
Sbjct: 669 NILINSLCKNNKVKSAVSLMEDMKIWGVTP-NTTTYNAIFKGLRDEKDLEKVFEFMDRMI 727
Query: 265 QKNCAP 270
+ C P
Sbjct: 728 EHACNP 733
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + TY L+ + A EK +ELF+ + + ++ N + N ++ G+V
Sbjct: 416 APDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVN 475
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E +R+ + D TY I++ N ++ + +EM SG S D + Y L++ +
Sbjct: 476 FFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM-LKSGCSPDAIVYYTLISGF 534
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
A + +A S L E +K + + Y+ LI G +K ++++ L+
Sbjct: 535 SQAGRMADA-SFVLAELKKLGIRPDTVCYNTLI---GGFCRTNKFHRVFEMLK 583
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 10/204 (4%)
Query: 58 NALMYNEMMTLYMSVG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 116
+ ++YN ++ VG Q E + L+ +K PD TYN I I++ K+
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKEL 441
Query: 117 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 176
DEM + G V VN + + + V++ + VEA++ + +TY LI +
Sbjct: 442 FDEM--NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
+ N +K +++ + + + Y ++S + G + + ++ + K+ D
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRP-D 558
Query: 237 ISACNRLLGAFSDVGLTEKANEFH 260
N L+G F + N+FH
Sbjct: 559 TVCYNTLIGGFC------RTNKFH 576
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 4/230 (1%)
Query: 46 LFERVK-QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 104
L ER++ Q + + + YN ++ + G++EK + +E+ ++ V P++ T N +
Sbjct: 405 LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGM 464
Query: 105 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 164
T + F E G D V Y L+N + ++ A E KS
Sbjct: 465 CRTGRVSSAVNFFVEAQ-RRGMKGDAVTYTALINAFCNVNNFEKA-MELFNEMLKSGCSP 522
Query: 165 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 224
I Y LI ++ G + L+ + + Y ++ + V E++
Sbjct: 523 DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEML 582
Query: 225 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+ +++ D N L+ S G + A + +++ PT A+
Sbjct: 583 KEMEEAGLKP-DTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVAT 631
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
YTAL+ Y A E A LF+R+ N++ +N M+ G+V+ L+VE+
Sbjct: 501 HAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVED 560
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + +V P + TYN+ + + D+ + L+ + SG + V Y + Y +
Sbjct: 561 MAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI-SSGYQPNVVTYTAFIKAYCSQG 619
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L AE + + + +I Y+ LI Y +G D + + + T + + Y
Sbjct: 620 RLEEAEEMVIKIKNEGVLLDSFI-YNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTY 678
Query: 205 ICILSSYLMLGHLKE 219
++ ++ H KE
Sbjct: 679 SILMKHLVIEKHKKE 693
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ ++A ++ + + ++ + + +N ++ Y G +E V+ +
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLM 386
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K V P++ TYN I ++D+ L++M +S S D V Y L++
Sbjct: 387 ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMV-ESKLSPDVVTYNTLIHGLCEVGV 445
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A + + QW T++ ++ +G + QI +SL+ K Y
Sbjct: 446 VDSASRLFRLMIRDGFSPDQW-TFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
++ Y G ++ + +
Sbjct: 505 ALIDGYCKAGKIEHAASLFKR 525
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ Y + + A+++ +++ N + YN ++ G VE+ +++
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +VPD FTY I+ + ++ K LDEMSC + + V Y NL++ ++
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREG- 363
Query: 146 LVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
NA+ + + E + Q ITYD L+ +G D+ + K + + +
Sbjct: 364 --NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y I+ + K+ ++ + + + S ++ + ++ G EKA++ +
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISP-NVYTYSIMIHGLCQSGEPEKASDLLEEM 480
Query: 264 LQKNCAP 270
K P
Sbjct: 481 TTKGLKP 487
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++H + EKA +L E + L NA +Y +++ Y G V + +++
Sbjct: 456 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 515
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ NV+PD++ YN I + +++ K+ +M + G + Y L++ Y+
Sbjct: 516 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGD 574
Query: 146 LVNAE 150
L +AE
Sbjct: 575 LESAE 579
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 35/131 (26%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA------ 79
TY+ L+H Y E AE+L +R+ + L N ++Y +++ Y +EKV+
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Query: 80 -----------------------------LVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
V+ I++ VPD+ Y+ IS T +
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680
Query: 111 DQVKKFLDEMS 121
++ LDEMS
Sbjct: 681 EKAFGILDEMS 691
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 4/257 (1%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
E L LS TY L++ +E+ +L E ++ + N++ YN M+ ++ G
Sbjct: 328 MENLKLSPDVV-TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKG 386
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
++++V V +++ +PDI TYN IS +D+ + +DEM DD
Sbjct: 387 KMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVT-- 444
Query: 134 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+N + + ++ L A + ++Y LII Y + ++W ++
Sbjct: 445 LNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMK 504
Query: 194 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 253
+ + Y +++ +G + + +D+ +S +I+ N ++ + G
Sbjct: 505 EKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY-NTIIHGYCQEGQV 563
Query: 254 EKANEFHMLLLQKNCAP 270
EKA +FH +++KN P
Sbjct: 564 EKAFQFHNKMVEKNFKP 580
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 8/239 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L +A +L +K L N +N ++ +G +++ A V+E +
Sbjct: 234 TYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELM 293
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +VVPD +TYN+ IS I + + +EM + S D V Y L+N H
Sbjct: 294 SQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEME-NLKLSPDVVTYNTLINGCF--EH 350
Query: 146 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ E L+E E + +TY+ ++ + G D++D+ + + + Y
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
++S + +G + E ++D+ + D++ N +L A K +E H LL
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTL-NTMLRALCR---ERKLDEAHDLL 465
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T +L + ++A +L ++ + + Y ++ Y + + + +E+
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEM 503
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K K ++P I TYN I+ +Q LDE+ +SG D + Y +++ Y
Sbjct: 504 KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL-LESGLVPDEITYNTIIHGYCQEGQ 562
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A EK+ + +T + L+ G +K +++ + + + + +Y
Sbjct: 563 VEKAFQFHNKMVEKNF-KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYN 621
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
I+ S E +++++ ++ D N +LG +D G + A EF
Sbjct: 622 TIILSLCKEKRFGEAFDLLEEMEEKKLGP-DCYTYNAILGGLTDAGRMKDAEEF 674
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 102/240 (42%), Gaps = 17/240 (7%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY ++ + ++ ++ ++++S + + YN +++ + VG++++ +++
Sbjct: 372 SVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMD 431
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS---GGSDDWVKYVNLVNIY 140
E+ RK + D T N + + +D+ L C + G D V Y L+ Y
Sbjct: 432 EMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLL----CSARRRGYFVDEVSYGTLIIGY 487
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK----DKIDQIWKSLRMTK 196
A EK I ITY+ +I +G DK+D++ +S +
Sbjct: 488 FKHEKASQALRLWDEMKEKEIIP-SIITYNSMIAGLCQMGKTNQAIDKLDELLES-GLVP 545
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++T Y I+ Y G +++ + ++ + D+ CN LL G+ EKA
Sbjct: 546 DEIT---YNTIIHGYCQEGQVEKAFQFHNKMVEKNFKP-DVVTCNTLLCGLCKEGMLEKA 601
>gi|224089785|ref|XP_002308813.1| predicted protein [Populus trichocarpa]
gi|222854789|gb|EEE92336.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ALLH Y A++ + A +++ +K+ L N ++YN ++ + +G V+K + E++
Sbjct: 86 TFAALLHAYGRARYGDDAFKIYREMKEKGLGLNVVLYNSILAMCADLGHVDKAVEIFEDM 145
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K + PD +T++ I+ + + +V+ L+EM
Sbjct: 146 KSSGIKPDSWTFSSMITIFSCCGKVSEVENTLNEM 180
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
+A ++ ++ +Y G + V EE+K V P++ YN+ + + QVKKF
Sbjct: 13 DATTFSTLIRIYKVAGNFDGYLNVSEEMKALGVKPNLVIYNILLDAMGRAKRPWQVKKFY 72
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
++ D+G S +V + L++ Y A + +A EK + + Y+ ++ + A
Sbjct: 73 QDI-IDNGLSPSFVTFAALLHAYGRARYGDDAFKIYREMKEKGLGL-NVVLYNSILAMCA 130
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
LG+ DK +I++ ++ + K S + +++ + G + EV +++
Sbjct: 131 DLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEVENTLNE 179
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y ++L + A +KA E+FE +K S + ++ ++ M+T++ G+V +V + E+
Sbjct: 122 YNSILAMCADLGHVDKAVEIFEDMKSSGIKPDSWTFSSMITIFSCCGKVSEVENTLNEMF 181
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
P+IF I ID V K + +
Sbjct: 182 EAGFQPNIFILTSLIQCYGKAQRIDDVVKTFNRI 215
>gi|295828264|gb|ADG37801.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M +G + V Y + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIXAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 137
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 3/244 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT L+ G +AE +F ++ S + N YN MM Y + V+K + +E+
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
++P++ T+ + I T + +KFL +M+ G + Y L++ Y A +L
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
A S E EK TY LI G+ ++ D + + ++ + Y
Sbjct: 350 SEA-LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ Y G++++ E+ Q + +I + L+ + G E A + ++ K
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 267 NCAP 270
P
Sbjct: 468 GLLP 471
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+++ +HS E LP TY+ L+ G E+A+ L + +K+ NA+
Sbjct: 349 LSEALSLHSEIEKHEILP----DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN ++ Y G +EK V ++ K + P+I T++ I ++ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 121 SCDSGGSDDWVKYVNLVN 138
G D V Y L++
Sbjct: 465 VI-KGLLPDVVAYTALID 481
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ Y A ++AE L +++ + +Y+ MM Y + EK +V + +K
Sbjct: 402 YGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLK 461
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 144
P + TY I+ I +V K L+ +M G + Y L+N ++
Sbjct: 462 ECGFAPSVITYGCLIN---MYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLK 518
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
NA + + K + + Y+ +I + G+GN D+ + K ++ + + TSR +
Sbjct: 519 DWTNA-FAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTF 577
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ I+ + G ++ EI D ++S
Sbjct: 578 MPIIHGFARAGEMRRALEIFDMMRRSG 604
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++H YA T KA E F +++ L + Y ++ G+++ V E+
Sbjct: 646 TYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREM 705
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + F YN+ I A +I + + +M+ G D Y + +N A
Sbjct: 706 NAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMN-QEGVQPDIHTYTSFINACCKAGD 764
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ A + T+ E E + + TY LI +A +K ++ L++ K Y
Sbjct: 765 MLRA-TKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYH 823
Query: 206 CILSSYL 212
C+++S L
Sbjct: 824 CLMTSLL 830
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 116/274 (42%), Gaps = 13/274 (4%)
Query: 7 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+H + FE + +S YT+L+H YA + E+A ++ + + + + Y+
Sbjct: 310 MHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSI 369
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ + G E ++ K ++ + + Y I + N+D+ + + EM +
Sbjct: 370 VVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREME-EE 428
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLIILYAGLGNK 182
G Y +++ Y + + N E +V ++ ITY LI +Y +G
Sbjct: 429 GIDAPLDIYHTMMDGY---TMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKV 485
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
K ++ K ++ K + Y +++ +L L + + + D+ N
Sbjct: 486 SKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKP-DVVLYNN 544
Query: 243 LLGAFSDVGLTEKANEFHML--LLQKNCAPTNAS 274
++ AF +G ++A HM+ + ++ C PT+ +
Sbjct: 545 IIKAFCGMGNMDRA--IHMVKEMQKERCRPTSRT 576
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
TS T+ ++H +A A +A E+F+ +++S +N ++ + ++EK ++
Sbjct: 573 TSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEIL 632
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E+ V PD TY + AA + + ++ +M + G D Y L+
Sbjct: 633 DEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMR-NEGLQLDVFTYEALLKACCK 691
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ + +A + T E R Y+ LI +A G+ IW++ + +Q
Sbjct: 692 SGRMQSALAVTR-EMNAQKIPRNTFVYNILIDGWARRGD------IWEAADLMQQ 739
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P T + Y A++ +YA + K +ELF+ +++ + + +N ++ + G++
Sbjct: 250 PSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTP 309
Query: 78 VALVVE---EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
L +E E++R + PDI TYN IS+C+ N+++ D+M D W Y
Sbjct: 310 -NLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWT-YN 367
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
++++Y AE + E ++Y+ + +A GN +K+ I + +
Sbjct: 368 AMISVYGRCGLSGKAE-QLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEM 424
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + A E+A +F+ + + + YN M+++Y G K + ++
Sbjct: 330 TYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDL 389
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PD +YN ++ + A N+++VK +EM G D+ + Y ++++Y
Sbjct: 390 ESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDE-MTYNTMIHMYGKQGQ 448
Query: 146 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 201
N + L KS + ITY LI LG +KI++ + + T K T
Sbjct: 449 --NDLALQLYRDMKSSGRNPDVITYTVLI---DSLGKTNKIEEAAGMMSEMLNTGVKPTL 503
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
R Y ++ Y G E E D +S T
Sbjct: 504 RTYSALICGYAKAGKPVEAEETFDCMLRSGT 534
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 2/193 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ +Y + KAE+LF ++ +A+ YN + + G VEKV + EE+
Sbjct: 365 TYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEM 424
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ D TYN I D + +M SG + D + Y L++ + ++
Sbjct: 425 VKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMK-SSGRNPDVITYTVLID-SLGKTN 482
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ + + E + + TY LI YA G + ++ + + + + Y
Sbjct: 483 KIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYS 542
Query: 206 CILSSYLMLGHLK 218
+L +L K
Sbjct: 543 VMLDIHLRFNEPK 555
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ + + E+AEELFE ++ + + Y+ MM +Y + G K +
Sbjct: 1026 DTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSM 1085
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+K + V P I T +L + S ++ + +K L + ++ + + Y ++++ Y+
Sbjct: 1086 MKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK-ETDANLSTLPYSSVIDAYV 1141
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/189 (16%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +Y K ++++R+K+ L + YN ++ +Y + ++ ++++E++
Sbjct: 958 WNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMR 1017
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P + TY ++S ++Q ++ +E+ +G D Y ++ IY +
Sbjct: 1018 TVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQ-STGCKLDRSFYHIMMKIYRNSGSH 1076
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
A+ + ++ + + T L++ Y G + +++ +L+ T +++ Y
Sbjct: 1077 SKAQRLFSMMKDEGV-EPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSS 1135
Query: 207 ILSSYLMLG 215
++ +Y+ G
Sbjct: 1136 VIDAYVRNG 1144
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
K TY ++H+Y + A +L+ +K S + + + Y ++ ++E+ A
Sbjct: 430 GKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAG 489
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+ V P + TY+ I A + ++ D M SG D + Y +++I+
Sbjct: 490 MMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCM-LRSGTRPDQLAYSVMLDIH 548
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLI-------ILYAGLGNKDKIDQIWKSLR 193
+ + E ++++T + + +D ++ ++ LGN +K++ I + +R
Sbjct: 549 LRFN-----------EPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVR 597
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 54/112 (48%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY+AL+ YA A +AEE F+ + +S + L Y+ M+ +++ + ++
Sbjct: 502 TLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFY 561
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+E+ ++P+ Y L + + ++ + + + +M G + + Y+
Sbjct: 562 KEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYI 613
>gi|255557995|ref|XP_002520026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540790|gb|EEF42350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1040
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 9/233 (3%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
++AE + + + N+ + + YN + + G++ A + E + V P I TYN
Sbjct: 704 QEAENIVRKSIRENMDLDTVAYNIFIKAMLEAGRLHFAASIYEHMLSLGVTPSIQTYNTM 763
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
IS +D+ + + +C SG S D Y+N+V+ Y A N S + ++
Sbjct: 764 ISVYGRGEKLDKAVEIFN-TACSSGVSLDEKAYMNMVSYYGKAGKR-NEASLLFTKMQEE 821
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ ++Y+ +I ++A G + +++ +++ S Y+ ++ +Y E
Sbjct: 822 GIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQRDGWPPDSFTYLSLVQAYTESLKYSEA 881
Query: 221 GEIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
E ID + + +C N LL A++ GL +A + LL +P
Sbjct: 882 EETIDGMPKKGV----LPSCSHFNHLLSAYAKAGLMVEAERVYKKLLTSGLSP 930
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 3/220 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY ++ +Y + +KA E+F S +S + Y M++ Y G+ + +L+ +
Sbjct: 758 QTYNTMISVYGRGEKLDKAVEIFNTACSSGVSLDEKAYMNMVSYYGKAGKRNEASLLFTK 817
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + + P +YN+ I A + K+ M D G D Y++LV Y +
Sbjct: 818 MQEEGIKPGKVSYNIMIKVFAIAGLYHEAKELFHAMQRD-GWPPDSFTYLSLVQAYTESL 876
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
AE + +K + ++ L+ YA G + ++++K L + Y
Sbjct: 877 KYSEAEETIDGMPKKGVLP-SCSHFNHLLSAYAKAGLMVEAERVYKKLLTSGLSPDLACY 935
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSD-FDISACNRL 243
+L YL G +++ +Q K+ A SD F +SA L
Sbjct: 936 RAMLRGYLDYGQVEKGINFFEQIKKYAESDRFIMSAAVHL 975
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 4/239 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + TYT ++ E+A ++F +K + + Y+ ++T+ G ++
Sbjct: 289 APNTFTYTVVISSLVKEGLHEEAFKVFNEMKNTGHVPEEVTYSLLITVNTKKGNWDEAGR 348
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ E++ +VP FT ++ + + EM +D+ V Y L+ IY
Sbjct: 349 LYEDLISHGLVPSNFTCASLLTMYYKNGDFSKALSLFMEMQSKKIAADE-VIYGLLIRIY 407
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L + T E E+ TY + ++ GN +K + + ++ ++
Sbjct: 408 GKLG-LYDDAQKTFEETEQLGLLSDEKTYLAMAQVHLNSGNSEKALSVIEVMKSRNIWLS 466
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
YI +L Y+M L + E Q S T D +CN +L + + LTEKA F
Sbjct: 467 RFAYIVLLQCYVMKEDL-DCAEATYQ-ALSKTGLPDAGSCNDMLNLYLRLDLTEKAKTF 523
>gi|295828262|gb|ADG37800.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M +G + V Y + A AE+ T E EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIXAMAHAVARLYTVAEAYT-EEIEKSVTGDNWSTLDILMILYGRL 137
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 107/248 (43%), Gaps = 3/248 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY AL++ + E AE L ++ + N +++N M+ Y G V+K +
Sbjct: 274 RTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAV 333
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++R + D++TYN ++ KK L M+ ++G ++V Y L++I+
Sbjct: 334 MERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT-ENGVESNYVSYTTLISIHSKEG 392
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+V A + E ++ +TY+ +I Y G+ + ++ K + Y
Sbjct: 393 DMVEAR-RLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTY 451
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ + + G + + ++ KQ ++ A L+ + G +E+A +F+ +L
Sbjct: 452 AALVHGHCVNGKVDVALRLFEEMKQRGAKP-NVVAYTALISGLAKEGRSEEAFQFYDNML 510
Query: 265 QKNCAPTN 272
P +
Sbjct: 511 AAGLTPDD 518
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
PLSA + ++ + A + A L + + + + NA YN ++ Y +
Sbjct: 133 PLSA------SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDAR 186
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
VA V++E++ V P + TY + + + +I +V+ DE+ + D + Y ++
Sbjct: 187 VAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYF-YSAVI 245
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
N Y A ++ A S E + + TY LI + +G + + + +++
Sbjct: 246 NAYCRAGNVRRA-SEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQL 301
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 2/162 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y LL Y K + E+ + ++ + Y ++ + G + KV V +EIK
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
RKNV D++ Y+ I++ N+ + + DE +G + Y L+N + +
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDE-CVGNGIEPNERTYGALINGFCKIGQI 289
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 188
AE L + + I ++ +I Y G DK +I
Sbjct: 290 EAAE-MLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEI 330
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 9/214 (4%)
Query: 7 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
I ER F + ++ TY+ ++ + +A ++F + NA+ +N
Sbjct: 266 ISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 325
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SC 122
+M +++ G+ EKV V ++KR PD TYN I S N+++ K L+ + C
Sbjct: 326 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC 385
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ S N + I+ VN+ + + + +TY+ L+ ++A +
Sbjct: 386 NLNASS-----FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 440
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 216
D + ++ K + + + + Y ++S++ +GH
Sbjct: 441 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 474
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/233 (15%), Positives = 90/233 (38%), Gaps = 40/233 (17%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A+ F+ +K + ++Y ++ + G + + V E+K + P+++TY++ I
Sbjct: 234 EAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVI 292
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+ + I + EM D G + + + NL+ +++ A
Sbjct: 293 DALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKA------------------ 333
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
G +K+ Q++ ++ + Y ++ S+ +L+E
Sbjct: 334 ------------------GRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 375
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+I++ K+ + + S+ N + G S +G A+ + C P +
Sbjct: 376 KILNSVKKGC--NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVT 426
>gi|255582522|ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 13 YFE---GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
YFE G+ TY LL +A A+ + LF+ + QS +S + YN +M Y
Sbjct: 193 YFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVSPDIYTYNGVMDAY 252
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
G + ++ V+ +K PDI T+NL I S + D++++ + S
Sbjct: 253 GKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSL-LHSKERPT 311
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ +++ Y A NAE S L + K +ITY+ LI++Y + K +I+
Sbjct: 312 LPTFNSMITNYGKARQKENAE-SVLQKMTKMKYTPNFITYESLIMMYGFCDSVSKAREIF 370
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ + +++ +L Y + G E + D
Sbjct: 371 DDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFD 406
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%), Gaps = 9/214 (4%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 64
I ER F + ++ YT + + A + + +A ++F + NA+ +N
Sbjct: 1298 ISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 1357
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SC 122
+M +++ G+ EKV V ++KR PD TYN I S N+++ K L+ + C
Sbjct: 1358 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC 1417
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ S N + I+ VN+ + + + +TY+ L+ ++A +
Sbjct: 1418 NLNASS-----FNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 1472
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 216
D + ++ K + + + + Y ++S++ +GH
Sbjct: 1473 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGH 1506
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/233 (15%), Positives = 90/233 (38%), Gaps = 40/233 (17%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A+ F+ +K + ++Y ++ + G + + V E+K + P+++TY++ I
Sbjct: 1266 EAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVI 1324
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+ + I + EM D G + + + NL+ +++ A
Sbjct: 1325 DALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHVKA------------------ 1365
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
G +K+ Q++ ++ + Y ++ S+ +L+E
Sbjct: 1366 ------------------GRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAV 1407
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+I++ K+ + + S+ N + G S +G A+ + C P +
Sbjct: 1408 KILNSVKKGC--NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVT 1458
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ KA EL++ + + N + Y+ ++ + GQV+ ++E+
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K +VP+I TYN I + N+ + ++FL +M D D + Y L++ Y+
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV-MPDLITYNTLIHGYVKEGK 559
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + L E Q +TY+ +I ++ GN + D ++K + + Y+
Sbjct: 560 MHEA-FNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYM 618
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
+++ +++ G+ K+ ++ D+ Q + D
Sbjct: 619 SMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 3/247 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L+H Y EKA + F+ + L + + YN ++ G + K + +++
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+ TY++ I S +D FLDEM + G + + Y +++ Y + +
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM-VNKGIVPNIMTYNSIIKGYCRSGN 524
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V+ L + ITY+ LI Y G + + K + + + Y
Sbjct: 525 -VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYN 583
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
I+S + + G+++E + + D ++ G ++K+ + H +LQ
Sbjct: 584 MIISGFSVHGNMQEADWVYKKMGARGIEP-DRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642
Query: 266 KNCAPTN 272
K AP +
Sbjct: 643 KGLAPDD 649
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 92/232 (39%), Gaps = 3/232 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL+ + AEEL +K+ + + + ++ Y G +EK + I
Sbjct: 371 TYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTI 430
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PDI TYN I ++ + + D+M + V Y L++ +
Sbjct: 431 SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE-IFPNHVTYSILIDSHCEKGQ 489
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ NA + K I +TY+ +I Y GN K Q +R K Y
Sbjct: 490 VDNAFAFLDEMVNKGIVP-NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
++ Y+ G + E ++ + ++ D N ++ FS G ++A+
Sbjct: 549 TLIHGYVKEGKMHEAFNLL-KIMENENVQPDAVTYNMIISGFSVHGNMQEAD 599
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY ++L L +W +KA E+F + ++ + +N ++ + G++E+ +E
Sbjct: 231 TYNSVLKGLLRNGRW-DKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKE 289
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + V PD+ +++ I +D ++L EM + G D V Y ++ + A
Sbjct: 290 MRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR-EFGLMPDGVIYTMVIGGFCRAG 348
Query: 145 HLVNA 149
++ A
Sbjct: 349 LMLEA 353
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/234 (16%), Positives = 95/234 (40%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+++ L+ L+ + A E +++ L + ++Y ++ + G + + V +E+
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+PD+ TYN ++ + ++ L+EM + G D + L++ Y +
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK-ERGVPPDLCTFTTLIHGYCRDGN 419
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A +++ + + +TY+ LI G+ K +++W + + Y
Sbjct: 420 IEKALQFFDTISDQRL-RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYS 478
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++ S+ G + +D+ +I N ++ + G K +F
Sbjct: 479 ILIDSHCEKGQVDNAFAFLDEMVNKGIVP-NIMTYNSIIKGYCRSGNVSKGQQF 531
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/240 (17%), Positives = 92/240 (38%), Gaps = 15/240 (6%)
Query: 37 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
A W + + V SN N N M+ Y Q +V V+ E++++ V PD+ T
Sbjct: 137 AGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVT 196
Query: 97 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT------ASHLVNAE 150
+N+ + + +++ +D M G V Y +++ + A + A
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSM-VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255
Query: 151 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 210
+ V + +++ LI + G ++ + +K +R + ++ C++
Sbjct: 256 DACGVAPDVR-------SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGL 308
Query: 211 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ G + E + + ++ D ++G F GL +A ++ C P
Sbjct: 309 FTRRGEMDHAAEYLREMREFGLMP-DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLP 367
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TYT LL + + E+A LFE ++ L +Y +++ Y G + K V+E
Sbjct: 129 QTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAFSTVDE 188
Query: 85 IKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K + PD++TY++ I+ C D + + L EMS G V + ++N Y A
Sbjct: 189 MKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSY-LGVECSTVTFNTIINGYGKA 247
Query: 144 SHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
E+S ++E S+ T++ +I Y G +K+++ + ++
Sbjct: 248 KMFREMENSLTNMIEIGNSVP--DLFTFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDI 305
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ + ++ SY G +++ +I+ K+ + N ++ F G E +E+
Sbjct: 306 KTFNILIKSYGKAGMYEKINSVIEFMKKRFFPP-TVVTYNIIIETFGRAGDIENMDEY 362
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
N VPD+FT+N I + + I++++K+ +E G S D + L+ Y A +
Sbjct: 265 NSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQL-MGISPDIKTFNILIKSYGKAG-MYE 322
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
+S + +K +TY+ +I + G+ + +D+ +K+++ K + Y ++
Sbjct: 323 KINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITYCSLV 382
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
S+Y G L +V I+ Q + S D + N ++ A+ G +K E + + ++ C
Sbjct: 383 SAYSKAGLLMKVNSILRQVENSDVV-LDTTFFNCIINAYGQAGDVDKMAELFLEMREREC 441
Query: 269 APTNAS 274
P N +
Sbjct: 442 MPDNVT 447
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +++ Y + EK E+ + + +S + +N ++ Y G EK+ V+E +
Sbjct: 272 TFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFM 331
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K++ P + TYN+ I + +I+ + ++ M G + + Y +LV+ Y A
Sbjct: 332 KKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMK-HLGMKPNAITYCSLVSAYSKAGL 390
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
L+ +S L + E S ++ +I Y G+ DK+ +++ +R
Sbjct: 391 LMKV-NSILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMR 437
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
T TY ++ + A E +E F+ +K + NA+ Y +++ Y G + KV
Sbjct: 337 PPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNS 396
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ +++ +VV D +N I++ ++D++ + EM D+ V + ++ Y
Sbjct: 397 ILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDN-VTFATMIQAY 455
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ + ALL LY+ AEEL + +K++ L + +YN M++LY +G ALV +
Sbjct: 787 QVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKG 846
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ PD T+N I + + + + L EM +K N NI
Sbjct: 847 MQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREM----------IKTGNAPNIS---- 892
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
TY LI Y L + + ++KS+ T K + Y
Sbjct: 893 -----------------------TYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAY 929
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+++ Y G +++ EII+Q K + ++ + L+ ++ G T KA E L
Sbjct: 930 NVMINVYRKAGEHRKIEEIIEQMKVDGF-EPSLTTIHMLMDSYGKGGATGKAEEVLETLP 988
Query: 265 QKNCAP 270
+ +P
Sbjct: 989 EIGMSP 994
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 79
+A TYT L+ Y + E AE +F+ + ++ +A YN M+ +Y G+ K+
Sbjct: 887 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 946
Query: 80 LVVEEIKRKNVVPDIFTYNLWISS---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
++E++K P + T ++ + S AT ++V + L E+ G S D + Y ++
Sbjct: 947 EIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEI----GMSPDAIHYTSI 1002
Query: 137 VNIYITASHLVNAE 150
+N SHL N +
Sbjct: 1003 IN-----SHLNNKD 1011
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 15/260 (5%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A +L + A A+ELF+R +S++ +YN +M++Y G V
Sbjct: 88 APNPRMLAVMLSVLGRANQPGLAQELFDRA-ESSIGNCVQVYNSLMSVYARHGDWNSVQQ 146
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ ++ + PD+ T+N+ I + + + L + +G D + Y N
Sbjct: 147 LLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITY----NTL 202
Query: 141 ITASHLVNAESSTLVEAEKSITQRQ------WITYDFLIILYAGLGNKDKIDQIWKSLRM 194
I+A L N S ++ E+ QRQ W TY+ +I +Y G + I++ ++
Sbjct: 203 ISACSLNNRLSDAILIFEE--MQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQE 259
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
+ Y +L ++ G ++EV I + + S +I+ N ++ + G+
Sbjct: 260 QGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY-NTMIHMYGKAGMHR 318
Query: 255 KANEFHMLLLQKNCAPTNAS 274
KA E ++ + ++ P + +
Sbjct: 319 KAEELYVQMKEEGRCPDSVT 338
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/228 (17%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A L + V + L + + YN +++ ++ L+ EE++R+ PDI+TYN IS
Sbjct: 180 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMIS 239
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
++ M + G + D V Y ++++ + + E + + +
Sbjct: 240 VYGRAGRVEAASSIFRIMQ-EQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 298
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
+ ITY+ +I +Y G K ++++ ++ + S + ++ + G + E
Sbjct: 299 SDE-ITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAA 357
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + +S + A + ++ A++ + A + +L+ P
Sbjct: 358 MFEDMLKSQVRP-TLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRP 404
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ +Y A E A +F +++ + +A+ YN ++ + G++E+V + +
Sbjct: 233 TYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMM 292
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ D TYN I + ++ +M + G D V + L++ + +
Sbjct: 293 RDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK-EEGRCPDSVTFTVLIDT-LGKAG 350
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
VN ++ + KS + + +I YA
Sbjct: 351 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYA 382
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/250 (16%), Positives = 108/250 (43%), Gaps = 3/250 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + Y+ALL YA E+A + + + L NA N ++ + G+ ++++
Sbjct: 678 AGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISE 737
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + + P+ T+ + + + N+++ + +M ++G S + L+ +Y
Sbjct: 738 FFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMK-EAGFSPSIQVFKALLALY 796
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ ++AE + + +K+ + Y+ +I LY+ LG+ ++K ++
Sbjct: 797 SRETVEIDAE-ELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPD 855
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ + ++ Y ++E ++ + ++ + +IS L+ A+ + E A
Sbjct: 856 ATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAP-NISTYTTLISAYGRLQAYEDAELVF 914
Query: 261 MLLLQKNCAP 270
+ + C P
Sbjct: 915 KSIAETGCKP 924
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +LL + + E A L + + + YN ++ GQ++ ++ E+
Sbjct: 185 TFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEM 244
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KN++P++ TY+ I A +D + +EM G S D V Y L++IY
Sbjct: 245 PAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKF-LGISLDRVSYNTLLSIYAKLGR 303
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
A E E S ++ +TY+ L+ G G + K D + K K + S N
Sbjct: 304 FEEA-MDVCREMENSGIRKDVVTYNALL---GGYGKQYKYDVVRKVFEEMKARHVSPNLL 359
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y ++ Y G +E ++ ++K++ D+ + L+ A GL E A
Sbjct: 360 TYSTLIDVYSKGGLYREAMDVFREFKKAGLKA-DVVLYSALIDALCKNGLVESA 412
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL Y + ++FE +K ++S N L Y+ ++ +Y G + V E
Sbjct: 325 TYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREF 384
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
K+ + D+ Y+ I + ++ LDEM+ G + V Y ++++ +
Sbjct: 385 KKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMT-KEGIRPNVVTYNSIIDAF 438
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 10/241 (4%)
Query: 26 TYTALLHL--YAGAKWTEKAE-----ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
TY A++ G + AE LF + + + YN ++ GQ++
Sbjct: 172 TYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLA 231
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ E+ RK+++P++ TY+ I A +D+ +EM S G D V Y L++
Sbjct: 232 FQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDR-VSYNTLLS 290
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
IY A + E E S ++ +TY+ L+ Y G +++ ++++ ++ +
Sbjct: 291 IYAKLGRFEEA-LNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIF 349
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
Y ++ Y G +E E+ ++K++ D+ + L+ A GL E A
Sbjct: 350 PNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKA-DVVLYSALIDALCKNGLVESAVS 408
Query: 259 F 259
F
Sbjct: 409 F 409
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
K + TY ALL Y E+ + +FE +K + N L Y+ ++ +Y G ++ V
Sbjct: 315 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEV 374
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
E K+ + D+ Y+ I + ++ FLDEM+ G + V Y ++++ +
Sbjct: 375 FREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMT-KEGIRPNVVTYNSIIDAFG 433
Query: 142 TASHLVNAESSTLVEAE 158
+ + +A S + + E
Sbjct: 434 RSGIVEDATESEVGDKE 450
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
LL Y W + A+ LF+ VKQ + S + YN + + GQ LVV E KR+
Sbjct: 537 GLLMGYGDNVWVQ-AQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRGAQLVVLEGKRR 595
Query: 89 NVVPDIFTYNLWISSC 104
+V N+W +SC
Sbjct: 596 HV-----WENMWSNSC 606
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 12/262 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
E P ++ + ALL GAK + AE+ F + +S + +N +++ +GQ
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWV 131
+ K V ++IK + P + TYN I C N+ V L EM ++G S V
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAV 265
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
+ L+N Y S+ A E ++ +TY+ LI +GL ++ K+++ K
Sbjct: 266 TFGVLINGYCKNSNTA-AAVRVFEEMKQQGIAASVVTYNSLI---SGLCSEGKVEEGVKL 321
Query: 192 LRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 248
+ + S N I C+L + G + + + ID + + D+ N L+ +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEPDVVIYNILIDVYR 380
Query: 249 DVGLTEKANEFHMLLLQKNCAP 270
+G E A + +K +P
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISP 402
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ +Y E A + E + + +S N YN ++T + G + +++E+K
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K + D+ TYN+ I + + + K LDEMS + G + + Y ++ + ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+A EK + +TY+ I + +G D+ + + +
Sbjct: 491 KSA-YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +L + A + + + + N+ + ++YN ++ +Y +G++E V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K + P++ TYN I+ + + + LDEM + G D V Y L+
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADVVTYNVLIGALCCKGE 454
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L E + + +TY+ +I + GN +I + +++ Y
Sbjct: 455 VRKA-VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
+ + +G + E +++++
Sbjct: 514 VFIKYFCQIGKMDEANDLLNE 534
>gi|295828270|gb|ADG37804.1| AT1G07590-like protein [Neslia paniculata]
Length = 194
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L+YN ++ + G+ + +A + +K P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDG 79
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M +G + V Y L + A AE+ T E E+SIT W T D L+ILY+ L
Sbjct: 80 MK-KAGVEPNEVSYCILAMAHAIARLYTVAEAYT-EEIERSITGDNWSTLDILMILYSRL 137
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELVRTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV-EEI 85
Y+ ++H + + ++AEEL +++ + +Y+ MM Y +V Q EK L+V E +
Sbjct: 361 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGY-TVAQDEKKCLIVFERL 419
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P I +Y I+ + + EM G + Y L+N +I
Sbjct: 420 KECGFRPSIISYGCLINLYVKIGKVPKALAVSKEME-SHGIKHNNKTYSMLINGFIHLHD 478
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
NA S + KS Q Y+ L+ + +GN D+ +I++ ++ + + ++R +
Sbjct: 479 FANA-FSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFR 537
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATS 233
I+ + + G +K + +D ++S +
Sbjct: 538 PIIEGFAVAGDMKRALDTLDLMRRSGCA 565
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A TYT ++ YA + KA E F ++K+S L + +Y ++ G+++
Sbjct: 600 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 659
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V E+ + + + F YN+ I A ++ + + +M D G + + + +N
Sbjct: 660 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKED-GIPPNIHTFTSYINAC 718
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A + AE+ A+ + + T+ LI +A + D+ + ++ ++ K
Sbjct: 719 CKAGDMQRAENVIQEMADVGL-KPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPD 777
Query: 201 SRNYICILSSYL 212
Y C+++S L
Sbjct: 778 EAAYHCLVTSLL 789
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 108/292 (36%), Gaps = 36/292 (12%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 245 FERIPKPSRRE--FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 302
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------ 121
+ VEE+K + + + TY++ I+ T + + K E
Sbjct: 303 DMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYS 362
Query: 122 ------CDSGGSDDWVKYVN---------LVNIYITASH---LVNAESSTLVEAEK---S 160
C SG D + V +++Y + H + E L+ E+
Sbjct: 363 NIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKEC 422
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ I+Y LI LY +G K + K + K ++ Y +++ ++ L
Sbjct: 423 GFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANA 482
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
I + +S D + N L+ AF +G ++A + ++ P+N
Sbjct: 483 FSIFEDMIKSGLQP-DRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSN 533
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ T+ ++ +A A ++A + + +++S + + YN ++ + QVE+ V+
Sbjct: 532 SNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVL 591
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+++ + P+ TY + + AA+ +I + ++ ++ +SG D Y L+
Sbjct: 592 DKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIK-ESGLKLDVYIYETLLRACCK 650
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ + +A + T + + I + +I Y+ LI +A G+ +W++ + KQ
Sbjct: 651 SGRMQSALAVTREMSFQKIPRNTFI-YNILIDGWARRGD------VWEAADLMKQ 698
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 43/95 (45%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ + ++A +FER+K+ + + + ++ + G +++ ++ ++
Sbjct: 501 YNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMR 560
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
R P + TYN I +++ LD+MS
Sbjct: 561 RSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMS 595
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 6/260 (2%)
Query: 13 YFEGL-PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
YF + P ++ +YT ++ A +K ++A ELFE +K + S N + Y ++ +
Sbjct: 96 YFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLK 155
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDW 130
G++E EE+ + VP TY + I C A + D K F E G D
Sbjct: 156 AGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF--EQMVQKGCVPDT 213
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
+ Y L++ + AS + A V K + +TY ++ + L ++ ++
Sbjct: 214 ITYTTLIDGFSKASKMDEARKLLDVMLTKG-PEPTAVTYGSIVHGFCKLDMINEAKEVIA 272
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
+R + + +LS YL G +E +++ + + D+ L+
Sbjct: 273 QMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP-DVILYTSLIDLLFST 331
Query: 251 GLTEKANEFHMLLLQKNCAP 270
G +A +++K CAP
Sbjct: 332 GRVPEARHVFDSMIEKGCAP 351
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 16/255 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT+L+ L +A +F+ + + + +AL Y ++ + +G VE ++E +
Sbjct: 321 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ V PD F YN + +DQ D M SG + V + L++
Sbjct: 381 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA-SGIKPNAVTFNVLMHGLFKDGKT 439
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
A S EK ++Y LI GLG ++ + + + Q+M R I
Sbjct: 440 DRAFSLFKEMLEKEEVPPTLVSYTILI---DGLGKAGRVSEAF----LQFQEMIDRGIIP 492
Query: 207 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+Y L G + E ++++ + + D+ A + L+ D + + A +
Sbjct: 493 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP-DVQAYSALITGLIDSSMVDTAWDV 551
Query: 260 HMLLLQKNCAPTNAS 274
++++ CAP +
Sbjct: 552 FQEMMKRGCAPNEVT 566
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T+ TY +++H + +A+E+ ++++ ++ +++ Y+S G+ E+ V
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ E+ + PD+ Y I +T + + + D M + G + D + Y ++ +
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQNFS 364
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ V A L KS Y+ L+ Y L +++DQ +
Sbjct: 365 KIGN-VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL---ERVDQAF 408
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K F +H E +G+ T TYT+L+++ T +A+ELFE+V + + +M
Sbjct: 416 KAFALHD-EMMTDGI---KPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMM 471
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M + + G +++ +++E+ R N+ PD TYN + ++ ++ + EM
Sbjct: 472 NTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMK- 530
Query: 123 DSGGSDDWVKYVNLVNIY 140
G D + Y L++ Y
Sbjct: 531 RRGIKPDHISYNTLISGY 548
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 14/214 (6%)
Query: 48 ERVKQSNL----SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
E VKQ + ++N L++ L+M ++E +++ EI+ K +V D TYN+ I+
Sbjct: 353 EMVKQGMVPTFYTYNTLIHG----LFME-NKIEAAEILIREIREKGIVLDSVTYNIVING 407
Query: 104 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 163
+ + DEM D G Y +L IY+ E+ L E
Sbjct: 408 YCQHGDAKKAFALHDEMMTD-GIKPTQFTYTSL--IYVLCRRNKTREADELFEKVVGKGM 464
Query: 164 RQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
+ + + L+ + GN D+ + K + Y C++ G +E E
Sbjct: 465 KPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARE 524
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ + K+ IS N L+ +S G T+ A
Sbjct: 525 LMGEMKRRGIKPDHISY-NTLISGYSKKGDTKHA 557
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 12/262 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
E P ++ + ALL GAK + AE+ F + +S + +N +++ +GQ
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWV 131
+ K V ++IK + P + TYN I C N+ V L EM ++G S V
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAV 265
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
+ L+N Y S+ A E ++ +TY+ LI +GL ++ K+++ K
Sbjct: 266 TFGVLINGYCKNSNTA-AAVRVFEEMKQQGIAASVVTYNSLI---SGLCSEGKVEEGVKL 321
Query: 192 LRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 248
+ + S N I C+L + G + + + ID + + D+ N L+ +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEPDVVIYNILIDVYR 380
Query: 249 DVGLTEKANEFHMLLLQKNCAP 270
+G E A + +K +P
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISP 402
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ +Y E A + E + + +S N YN ++T + G + +++E+K
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K + D+ TYN+ I + + + K LDEMS + G + + Y ++ + ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+A EK + +TY+ I + +G D+ + + +
Sbjct: 491 KSA-YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +L + A + + + + N+ + ++YN ++ +Y +G++E V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K + P++ TYN I+ + + + LDEM + G D V Y L+
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADVVTYNVLIGALCCKGE 454
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L E + + +TY+ +I + GN +I + +++ Y
Sbjct: 455 VRKA-VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
+ + +G + E +++++
Sbjct: 514 VFIKYFCQIGKMDEANDLLNE 534
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEE 84
+YTAL++ Y E + EL +R+K +S + L YN ++ G E + + E
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + + PDI TYN +S+CA D+ + M+ D G D Y +LV +
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGKLR 296
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L L E + +Y+ L+ YA G+ + ++ ++ + Y
Sbjct: 297 RLEKV-CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+L+ + G +V ++ + K S T D D + N L+ F + G ++ ++
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNT-DPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 265 QKNCAP 270
++N P
Sbjct: 415 EENIEP 420
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 98/249 (39%), Gaps = 4/249 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ L +K E+F+ + +S + Y ++ Y G+ E +++ +K
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 87 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P I TYN I++CA L+ + + EM + G D V Y L++
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACAIRGL 262
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
AE + I TY L+ + L +K+ + + +Y
Sbjct: 263 GDEAEMVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN 321
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L +Y G +KE + Q Q+A + + + LL F G + + + +
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQM-QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 266 KNCAPTNAS 274
N P A+
Sbjct: 381 SNTDPDAAT 389
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY+ LL+L+ + + +LF +K SN +A YN ++ ++ G ++V +
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFH 411
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
++ +N+ PD+ TY I +C + +K L M+ +
Sbjct: 412 DMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN 451
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 3/244 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT L+ G +AE +F ++ S + N YN MM Y + V+K + E+
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML 290
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
++P++ T+ + I T + +KFL +M+ G + Y L++ Y A +L
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
A S E EK TY LI G+ ++ D + + ++ + Y
Sbjct: 350 SEA-LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ Y G++++ E+ Q + +I + L+ + G E A + ++ K
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEP-NIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 267 NCAP 270
P
Sbjct: 468 GLLP 471
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ G E+A+ L + +K+ NA+ YN ++ Y G +EK V ++
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
K + P+I T++ I ++ EM G D V Y L++
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI-KGLLPDVVAYTALID 481
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
++AE L +++ + +Y+ MM Y +G EK +V + +K P + +Y
Sbjct: 406 DRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCL 465
Query: 101 ISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 158
I+ + +V K L+ +M SG + Y L+N ++ NA S +
Sbjct: 466 IN---LYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANA-FSVFEDFT 521
Query: 159 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 218
K + + Y+ +I + G+GN D+ + + ++ + + T+R ++ I+ + G ++
Sbjct: 522 KDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMR 581
Query: 219 EVGEIIDQWKQSA 231
EI D ++S
Sbjct: 582 RALEIFDMMRRSG 594
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ YA TEKA + F ++ L + Y ++ G+++ V +E+
Sbjct: 636 TYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEM 695
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KN+ + F YN+ I A ++ + + +M G D Y + +N A
Sbjct: 696 SAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMR-KEGLLPDIHTYTSFINACCKAGD 754
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + + E E S + TY LI +A +K ++ +++ K Y
Sbjct: 755 MQKA-TEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYH 813
Query: 206 CILSSYL 212
C+++S L
Sbjct: 814 CLVTSLL 820
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ T+ ++H +A A +A E+F+ +++S YN ++ + Q+ K ++
Sbjct: 563 TTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAIL 622
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E+ V P+ TY + A+ + ++ ++ + + G D Y L+
Sbjct: 623 DEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLR-NEGLEIDVYTYEALLKSCCK 681
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ + +A + T + K+I + ++ Y+ LI +A G+ + + + +R
Sbjct: 682 SGRMQSALAVTKEMSAKNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMRKEGLLPDIH 740
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +++ G +++ EII + + S ++ L+ ++ + EKA
Sbjct: 741 TYTSFINACCKAGDMQKATEIIQEMEASGIKP-NLKTYTTLINGWARASMPEKA 793
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ TYT+L+++++ ++ + LF + + + +MYN ++ + + G +E+ ++
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+++K + PD TYN + +D+ + +DEM+ G D V Y L++ Y
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT-KRGIQPDLVSYNTLISGY 439
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 5/252 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM-TLYMSVGQVEKVA 79
A ++ Y AL+ Y + A + E + Q ++ YN +M L+M + A
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275
Query: 80 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
V+EE+++ PD+FTYN+ I+ N + + +EMS G V Y +L+ +
Sbjct: 276 -VLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS-QKGVRATAVTYTSLIYV 333
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ + + V +K I + + Y+ LI + G+ ++ +I + +
Sbjct: 334 FSRKGQVQETDRLFNVAVKKGI-RPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP 392
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
Y ++ + +LG L E +ID+ + D+ + N L+ +S G + A
Sbjct: 393 DDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQP-DLVSYNTLISGYSMKGDIKDALRV 451
Query: 260 HMLLLQKNCAPT 271
++ K PT
Sbjct: 452 RDEMMDKGFNPT 463
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y AL++ + E+A E+ +++ + + + YN +M + +G++++ +++E+
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ + PD+ +YN IS + +I + DEM D G + + Y L+
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM-MDKGFNPTLMTYNALIQ 472
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 116/292 (39%), Gaps = 45/292 (15%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
LPL T L HL A K +A EL ++ + N A+ YN ++ + + G+V+
Sbjct: 112 LPLCTTTFNIM--LRHLCATGKPV-RALELLRQMPRPN----AVTYNTVIAGFCARGRVQ 164
Query: 77 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 120
V+ E++ R + PD +TY IS ++ K DEM
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNA 224
Query: 121 ----SCDSGGSDDWVKY------------VNLVNIYITASHLVNAESS----TLVEAEKS 160
CD G D ++Y V N+ + A ++A +S L E +K+
Sbjct: 225 LIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA-LFMDARASDAYAVLEEMQKN 283
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
TY+ LI Y GN+ K ++++ + + T+ Y ++ + G ++E
Sbjct: 284 GFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQET 343
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+ + + D+ N L+ + G E+A E + +K P +
Sbjct: 344 DRLFNVAVKKGIRP-DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDD 394
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ TY AL+H A E A+ L ++ + N +++N ++ Y G V++ +
Sbjct: 364 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQ 423
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+++K + D+F YN S D+ K L M + G S + + + L++IY
Sbjct: 424 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCK 482
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ V A+ E E+ ITY+ LI Y+ GN K K ++ +R
Sbjct: 483 EGNFVEAK-RVFREMEEKGNVPNIITYNVLIDGYSKRGN-------MKEAHKLKDELENR 534
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
I + + L H GE ID A FD
Sbjct: 535 GLIPDVYTCTSLIH----GECIDGKVDMALKLFD 564
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H ++ E+A+ LFE +++ + + +Y +++ G V++ ++ +E+
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 356
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++P TY I ++ + ++EM G + V + L++ Y S
Sbjct: 357 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ-GKGIDLNPVIFNTLIDGY-CESG 414
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+V+ V EK + Y+ + L KD+ + S+ + ++
Sbjct: 415 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 474
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ Y G+ E + + ++ +I N L+ +S G ++A++ L
Sbjct: 475 TLIDIYCKEGNFVEAKRVFREMEEKGNVP-NIITYNVLIDGYSKRGNMKEAHKLKDELEN 533
Query: 266 KNCAP 270
+ P
Sbjct: 534 RGLIP 538
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++T L+ +Y +A+ +F +++ N + YN ++ Y G +++ + +E+
Sbjct: 472 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 531
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+ + ++PD++T I +D K DEM
Sbjct: 532 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMP 567
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A + Y E+ +++ ++ N + Y ++ + ++G++E+ + EE+
Sbjct: 262 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 321
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
+ K + D++ Y IS + N+ + DEM+ D G
Sbjct: 322 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT-DKG 360
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + + +A E+++ + + +S + Y+ +M + V+ V ++ E+
Sbjct: 173 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEM 232
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + V P++++Y + I D+ L +M DSG D V + ++ + A
Sbjct: 233 EARGVKPNVYSYTICIRVLGQAARFDEAYHILGKME-DSGCKPDVVTHTVIIQVLCDAGR 291
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A+ + + + S + +TY L+ G+ + ++W ++ +Y
Sbjct: 292 LSDAK-AVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYT 350
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HMLL 263
++ + +G + E + D+ K+ S S N L+ F + ++A E HM
Sbjct: 351 AVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSY-NSLISGFLKADMFDRALELFNHM-- 407
Query: 264 LQKNCAPT 271
C P+
Sbjct: 408 --NACGPS 413
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ++ Y + + KA + +E +K + + N ++ G++ V E+
Sbjct: 418 THVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYEL 477
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD TY + I C+ D+ F +M +SG D + +L++
Sbjct: 478 KAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM-VESGCVPDVLALNSLID------- 529
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LY G G ++ Q++ L+ K + T+ Y
Sbjct: 530 ----------------------------TLYKG-GKGNEAWQLFHKLKEMKIEPTNGTYN 560
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+LS G +KEV +++++ ++ ++ N +L S G A + + +
Sbjct: 561 TLLSGLGREGKVKEVMQLLEEMTRTIYPP-NLITYNTVLDCLSKNGEVNCAIDMLYSMTE 619
Query: 266 KNCAP 270
K CAP
Sbjct: 620 KGCAP 624
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F+GL +S KT +Y +L+ + AE+LF +K+ + YN ++
Sbjct: 757 FKGLGVSLKTG-SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSM 815
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ-VKKFLDEMSCDSGGSDDWVK 132
+VE++ V +E+ RK TYN IS + ++Q + + + MS G S
Sbjct: 816 RVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS--EGFSPTPCT 873
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
Y L++ + + +V+AE + E + + Y+ L+ + GN + + Q+++
Sbjct: 874 YGPLLDGLLKSGKMVDAE-NLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFE-- 930
Query: 193 RMTKQKMTS--RNYICILSSYLMLGHLKE 219
+M +Q + ++Y ++ + G L +
Sbjct: 931 KMVEQGINPDIKSYTILIDTLCTAGRLND 959
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 32 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 91
HL K E A +LF + K +S YN ++ + ++ + E+KR
Sbjct: 740 HLCKHKKALE-AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 798
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
PD FTYNL + + ++ ++++ K EM G +V Y +++ + + L A
Sbjct: 799 PDEFTYNLILDAMGKSMRVEEMLKVQKEMH-RKGYESTYVTYNTIISGLVKSKRLEQA 855
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 109/266 (40%), Gaps = 55/266 (20%)
Query: 8 HSGER-YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 66
H+ R Y +P K YTALL+ YA K EKA F+++ + + L++N +M
Sbjct: 12 HTRSREYANAIPQKLKGFMVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNILM 71
Query: 67 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
LY VV D TY + C +K + EM+
Sbjct: 72 YLYFQTDG--------------EVVGDWNTYCVAADRC--------LKAGIMEMAM---- 105
Query: 127 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR-QWITYDFLIILYAGLGNKDKI 185
+ L + E IT++ + I +D L+ LYA GNKD++
Sbjct: 106 -------------------------TMLKKLEGQITEKTKSIAFDTLLKLYARKGNKDEL 140
Query: 186 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 245
+IWKS + K+ ++ Y+ ++SS LML ++ + +W+ S + N L+
Sbjct: 141 YRIWKSDE-KRDKIYNKGYMSMISSLLMLDDIEAAEMMFKKWESRGLS-YYFRVPNILIN 198
Query: 246 AFSDVGLTEKANEFHMLLLQKNCAPT 271
A+ L EKA + K P+
Sbjct: 199 AYCRNNLLEKAGSLIDHAMMKGSEPS 224
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++H A T++A + F++VKQ + +A YN ++ + G+++ VVEE+
Sbjct: 373 TYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEM 432
Query: 86 KRKNVVPDIFTYNLWIS-SCAATLNIDQVKKF--LDEMSCDS 124
R + P++ T+N IS +C +L + +K ++E SC+
Sbjct: 433 HRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNP 474
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ TY AL+H A E A+ L ++ + N +++N ++ Y G V++ +
Sbjct: 368 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQ 427
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+++K + D+F YN S D+ K L M + G S + + + L++IY
Sbjct: 428 VVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSM-VERGVSPNTMSFTTLIDIYCK 486
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ V A+ E E+ ITY+ LI Y+ GN K K ++ +R
Sbjct: 487 EGNFVEAK-RVFREMEEKGNVPNIITYNVLIDGYSKRGN-------MKEAHKLKDELENR 538
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
I + + L H GE ID A FD
Sbjct: 539 GLIPDVYTCTSLIH----GECIDGKVDMALKLFD 568
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H ++ E+A+ LFE +++ + + +Y +++ G V++ ++ +E+
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 360
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++P TY I ++ + ++EM G + V + L++ Y S
Sbjct: 361 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ-GKGIDLNPVIFNTLIDGY-CESG 418
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+V+ V EK + Y+ + L KD+ + S+ + ++
Sbjct: 419 MVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFT 478
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ Y G+ E + + ++ +I N L+ +S G ++A++ L
Sbjct: 479 TLIDIYCKEGNFVEAKRVFREMEEKGNVP-NIITYNVLIDGYSKRGNMKEAHKLKDELEN 537
Query: 266 KNCAP 270
+ P
Sbjct: 538 RGLIP 542
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++T L+ +Y +A+ +F +++ N + YN ++ Y G +++ + +E+
Sbjct: 476 SFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDEL 535
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+ + ++PD++T I +D K DEM
Sbjct: 536 ENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMP 571
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A + Y E+ +++ ++ N + Y ++ + ++G++E+ + EE+
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
+ K + D++ Y IS + N+ + DEM+ D G
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT-DKG 364
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ A A+ E+A EL ++++ ++ ++ G+VE +V+E+
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PDI YN+ I N+D KF E+ DD V Y +++ + A
Sbjct: 244 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDD-VSYTSMIWVLCKAGR 302
Query: 146 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L AE +E E+++ Y+ +I+ G G+ + + +K L K++ +
Sbjct: 303 LSEAEELFGQMETERAVP--CAYAYNTMIM---GYGSAGQFENAYKLLDQLKERGCIPSV 357
Query: 205 ICILSSYLMLGHLKEVGEII 224
+ S LG ++V E +
Sbjct: 358 VSFNSILTCLGKKRKVDEAL 377
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L
Sbjct: 633 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 692
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 122
++EE+ +K + P+++T+N + + I++ + + EM C
Sbjct: 693 ILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKC 737
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+++ + A +AEELF +++ A YN M+ Y S GQ E +++++
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQL 348
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD-----------------EMSCDSGGSD 128
K + +P + ++N ++ +D+ + +M C +G +
Sbjct: 349 KERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVE 408
Query: 129 DWVK----------YVNLVNIYITASHLVNAES-STLVEAEKSITQR----QWITYDFLI 173
+ + NL+ + I L A+ E ++ +QR +TY LI
Sbjct: 409 EAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLI 468
Query: 174 ILYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
GLG K +D ++++++ T Y ++ ++ M G KE G I +
Sbjct: 469 ---DGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGR-KEDGHKIFKEMNR 524
Query: 231 ATSDFDISACNRLLGAFSDVGLTEKA 256
D++ N + G EK
Sbjct: 525 RGCQPDLTLLNTYMDCVFKAGDVEKG 550
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+Y+ L+H A + +F +KQ + +A YN ++ + G+++K V+EE
Sbjct: 567 RSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEE 626
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+K K V P + TY I A +D+ +E
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEE 661
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 4/262 (1%)
Query: 14 FEGLPLSAKT-SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 72
FE + A+ S TY ++ + A E+A + + ++ + L N L N M+
Sbjct: 380 FEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKA 439
Query: 73 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 132
+ E + E ++ P+ TY I N+D + + M D+G + + V
Sbjct: 440 KKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENM-LDTGHNANPVV 498
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
Y +L+ + + E + Q + + G+ +K I++ +
Sbjct: 499 YTSLIRNFFMHGRKEDGH-KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI 557
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
+ R+Y ++ G +E I KQ + D A N ++ F G
Sbjct: 558 KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFA-LDARAYNAVVDGFCKSGK 616
Query: 253 TEKANEFHMLLLQKNCAPTNAS 274
+KA E + K PT A+
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVAT 638
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 78/204 (38%), Gaps = 8/204 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT+L+ + E ++F+ + + + + N M G VEK + E+I
Sbjct: 498 VYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI 557
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K +PD+ +Y++ I + M G + D Y +V+ + +
Sbjct: 558 KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMK-QQGFALDARAYNAVVDGFCKSGK 616
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
L A L E + TY +I GL D++D+ + K K N
Sbjct: 617 LDKA-YEVLEEMKVKRVPPTVATYGSII---DGLAKIDRLDEAYMLFEEAKSKGIELNVI 672
Query: 204 -YICILSSYLMLGHLKEVGEIIDQ 226
Y ++ + +G + E I+++
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEE 696
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ + + +++ +Y E+A E+F R+K+ + +YN ++ + +++ + +V
Sbjct: 110 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++KR P++FTYN+ + + +D KK L EMS + G D V Y +++
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS-NKGCCPDAVSYTTVIS 224
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 93/246 (37%), Gaps = 3/246 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y AL++ + A EL + + +S N + Y+ ++ + + GQ+E + ++
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ P+I+T + + C ++M G + V Y LV + + +
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+V A S E+ TY LI +A G+ D IW + + Y
Sbjct: 368 IVKA-VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHMLLL 264
++ + KE +I+ + + + N + D G + A + F +
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAP-SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 265 QKNCAP 270
Q C P
Sbjct: 486 QHRCPP 491
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 101/249 (40%), Gaps = 37/249 (14%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T YT ++ + EK E+FE + ++++ +N + ++ Y GQ E +
Sbjct: 80 PTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHL 139
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ +K++ V P++ TYN +++C S G DW L+N++
Sbjct: 140 LARMKKERVEPNLITYNTVLNAC-------------------SKGGLDW---EGLLNLFA 177
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
H Q ITY+ L+ + G ++ ++K++ + +
Sbjct: 178 QMRH--------------EGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADA 223
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y ++ ++ L V E++ + + S DI+ N L+ A++D G A
Sbjct: 224 VTYKSLVDTFAGSNQLGRVEELLREMEDEGNSP-DIAGYNSLIEAYADAGNVHGAAGVFK 282
Query: 262 LLLQKNCAP 270
+ + CAP
Sbjct: 283 QMQRGGCAP 291
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 2/250 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A ETY+ LL +Y E+ LF +K+ + YN ++ ++ G ++
Sbjct: 290 APDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESIN 349
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ ++ V PD TY+ +S C + K M + + L++ Y
Sbjct: 350 LFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNE-STPSLEASAGLISSY 408
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ +A S E + Q YD LI YA G + ++ +
Sbjct: 409 GKMAMYKDALVSYYRIREAGLDP-QVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAP 467
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ ++ +Y +G E E + +Q S+ D LLG + D+GL E+A E
Sbjct: 468 VSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEF 527
Query: 261 MLLLQKNCAP 270
+++ + + P
Sbjct: 528 VIIKETSKVP 537
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 103/286 (36%), Gaps = 58/286 (20%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ +AG+ + EEL ++ S + YN ++ Y G V A V +++
Sbjct: 225 TYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQM 284
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------------ 121
+R PD+ TY+ + +QV+ +M
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYF 344
Query: 122 ----------CDSGGSDDWVKYVNLVNIYITAS----------HLVNAESSTLVEAEKSI 161
DSG D Y L+++ H++ ES+ +EA
Sbjct: 345 QESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAG- 403
Query: 162 TQRQWITYDFLIILYAGLG-NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
LI Y + KD + ++ +R Y ++ Y G E
Sbjct: 404 ----------LISSYGKMAMYKDALVSYYR-IREAGLDPQVSAYDALIQGYAKGGLYVEA 452
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
G + + A +S+ N ++ A+S VGL ++A EF L QK
Sbjct: 453 GSTLYAMNK-AGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQK 497
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
GA +KA E+ + + Y++++ +VEK L+ EE+K+ +VP +
Sbjct: 429 CGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSV 488
Query: 95 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE--- 150
+TY + I S C A L I Q + + DEM D+ + + V Y +L++ Y+ A + +A
Sbjct: 489 YTYTILIDSFCKAGL-IQQARNWFDEMLRDN-CTPNVVTYTSLIHAYLKARKVFDANKLF 546
Query: 151 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
L+E K +TY LI + G DK QI+ ++
Sbjct: 547 EMMLLEGSKP----NVVTYTALIDGHCKAGQIDKACQIYARMQ 585
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ TE+A L ++++ N + Y M+ + +G++E+ + ++
Sbjct: 717 YTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMC 776
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K P+ TY + I+ C +T +D+ + LDEM
Sbjct: 777 SKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEM 810
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/252 (17%), Positives = 113/252 (44%), Gaps = 17/252 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L++ K + ++ ++ +++ + N ++Y +M+ VG+ E+ ++ ++
Sbjct: 681 TYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKM 740
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P++ TY I I+Q + +M C G + +++ Y L+N + ++
Sbjct: 741 EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDM-CSKGCAPNFITYRVLIN-HCCSTG 798
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI--WKSLRMTKQKMTSRN 203
L++ L E +++ R +Y +I + N++ I I L +
Sbjct: 799 LLDEAHRLLDEMKQTYWPRHISSYRKIIEGF----NREFITSIGLLDELSENESVPVESL 854
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR-----LLGAFSDVGLTEKANE 258
Y ++ +++ G L+ ++++ S + ++ N+ L+ + S +KA E
Sbjct: 855 YRILIDNFIKAGRLEGALNLLEEISSSPS----LAVANKYLYTSLIESLSHASKVDKAFE 910
Query: 259 FHMLLLQKNCAP 270
+ ++ KN P
Sbjct: 911 LYASMINKNVVP 922
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ A EKA LFE +K++ + + Y ++ + G +++ +E+
Sbjct: 455 TYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEM 514
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R N P++ TY I + + K EM G + V Y L++ + A
Sbjct: 515 LRDNCTPNVVTYTSLIHAYLKARKVFDANKLF-EMMLLEGSKPNVVTYTALIDGHCKAGQ 573
Query: 146 LVNA 149
+ A
Sbjct: 574 IDKA 577
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K F +H E +G+ T TYT+L+++ + + A++LFE++ + S + +M+
Sbjct: 429 KAFNLHD-EMISKGI---QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ + + G +++ +++E+ ++N+VPD TYN + +++ ++ L EM
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK- 543
Query: 123 DSGGSDDWVKYVNLVNIY 140
G D + Y L++ Y
Sbjct: 544 RRGIRPDHISYNTLISGY 561
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +L+ E+A + E++K+ L A+ YN ++ Y + G + K +
Sbjct: 306 SYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRD 365
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+ R+ ++P + TYNL I + +D+ + +M DSG D + Y L+N Y
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG-DSGIVPDSITYNILINGY 421
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ AL+ + ++A L + + + N+ + + YN +M G+VE+ +++E+K
Sbjct: 484 FNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK 543
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
R+ + PD +YN IS + +I+ DEM
Sbjct: 544 RRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 111/289 (38%), Gaps = 40/289 (13%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
L K+S + L+ K + A E F+ +K+ + +N M++L++ + Q E V
Sbjct: 161 LGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETV 220
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ E+ R + ++T+N+ I+ + + K F+ M + G + V Y +++
Sbjct: 221 WVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME-NLGVKPNVVTYNTVIH 279
Query: 139 IYITASHLVNA---------------------------------ESSTLVEAEKSIT-QR 164
Y + + A E+S ++E K I
Sbjct: 280 GYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLP 339
Query: 165 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--TSRNYICILSSYLMLGHLKEVGE 222
+TY+ LI Y G D + M ++ + T Y ++ + + G + E
Sbjct: 340 TAVTYNTLIDGYCNKG--DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADG 397
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
+I S I+ N L+ + G +KA H ++ K PT
Sbjct: 398 MIKDMGDSGIVPDSITY-NILINGYCRCGNAKKAFNLHDEMISKGIQPT 445
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ E+A EL + +K+ + + + YN +++ Y G + + +E+
Sbjct: 518 TYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
P + TYN I D ++ L EM G + D Y +L+
Sbjct: 578 LSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEM-VSKGITPDDSTYFSLI 628
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y +LL ++A ++F + + + +A Y+ + + V V+E
Sbjct: 257 AYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERT 316
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KRKN++P++FTYN I N+++ + LDEM D W N + Y
Sbjct: 317 KRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWS--YNAIQAYHCDHS 374
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN+ + + ++ TY+ ++ L +G D+ +++W+S M R +
Sbjct: 375 EVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES-------MGKRGFY 427
Query: 206 CILSSYLMLGHLKEVGEIIDQWK 228
+S+Y ++ H G +WK
Sbjct: 428 PSVSTYAVMIH----GFCKKKWK 446
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 114/273 (41%), Gaps = 10/273 (3%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ K + ER + +P+ T YT+++ + A KA L E +K+ + L
Sbjct: 236 LVKAGKVAEAERVLQEMPVP--TLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNL 293
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN ++ + + ++++ ++EE+K + VPDIFTY++ I+ + + + L +
Sbjct: 294 TYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTL 353
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ + + V Y L++ + A+ VN +E + +TY LI GL
Sbjct: 354 RNEDDCTPNVVSYNTLIDGFSKAAR-VNDAYQLFLEMVTAGQHPDVVTYSTLI---RGLC 409
Query: 181 NKDKIDQIWKSL-RMTKQKMTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
N + + L M +K+ + Y ++S G L + D + ++
Sbjct: 410 NAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQP-NL 468
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ N L+ G A + ++ C+P
Sbjct: 469 AVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSP 501
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 3/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+H + ++A +LFERV + + + YN ++ Y +G +V +++ +
Sbjct: 275 TYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFM 334
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + PDI TY + I+ + ++++ K +++ D G + V Y L+N
Sbjct: 335 RYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDI-LDQGLQLNIVTYSVLLNALFKKG- 392
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 204
LV+ + L E I Y LI Y LG ++ ++ + +++ + TS N+
Sbjct: 393 LVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNH 452
Query: 205 ICILSSYLMLGHLKE 219
+ IL G L E
Sbjct: 453 LSILVGLCKKGLLVE 467
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 7/226 (3%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T T ++L+ Y + AE F ++ S+L + Y +M G+V + +
Sbjct: 517 PTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSI 576
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ E+ K + P+ TY++ I L FLD M G + D V Y L+ +
Sbjct: 577 LYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMH-GEGVNADPVTYNTLIQGFC 635
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ A I +TY+FLI + G + + + +SLR ++
Sbjct: 636 EVQDIQMAFHIHDRMVYCGIVPTP-VTYNFLINVLCLKGQVIQAEYLLESLRERGIELRK 694
Query: 202 RNYICILSSYLMLGHLKEV----GEIIDQWKQSATSDFDISACNRL 243
Y ++ + G E G+++D ++ DF +A NRL
Sbjct: 695 FAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFS-AAINRL 739
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y +LL ++A ++F + + + +A Y+ + + V V+E
Sbjct: 257 AYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERT 316
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KRKN++P++FTYN I N+++ + LDEM D W N + Y
Sbjct: 317 KRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWS--YNAIQAYHCDHS 374
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN+ + + ++ TY+ ++ L +G D+ +++W+S M R +
Sbjct: 375 EVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES-------MGKRGFY 427
Query: 206 CILSSYLMLGHLKEVGEIIDQWK 228
+S+Y ++ H G +WK
Sbjct: 428 PSVSTYAVMIH----GFCKKKWK 446
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 11/243 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL+ +A +K E E + ++ N + YN M+ +Y +G+++ + +E+
Sbjct: 365 TYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD TY + I S I + K L++M+ D+G V + L+ Y
Sbjct: 425 RAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMA-DAGLKPTLVAFSALICAYAKGGR 483
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+AE T S + + Y ++ ++A G +K+ ++++++ + Y
Sbjct: 484 RADAE-KTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQ 542
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L + +E+ EII D ++ C LG S + + + LL+
Sbjct: 543 VLLVALAKEDKCEEIEEII--------QDMEL-LCQMSLGVISTILIKARCVSQGGKLLK 593
Query: 266 KNC 268
K C
Sbjct: 594 KAC 596
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 46 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 105
LFE V+QS L + + YN +++ +E V EE+ PD++TYN +S
Sbjct: 281 LFE-VRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHG 339
Query: 106 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 165
++ ++ E+ + G D V Y +L+ + ++ E T E K+ ++
Sbjct: 340 RCGKAEEAERLFGEL-VEKGFMPDAVTYNSLLYAFAKEGNVDKVE-HTCEELVKAGFKKN 397
Query: 166 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
ITY+ +I +Y +G D ++ +R + Y ++ S + + E G++++
Sbjct: 398 EITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLE 457
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 11/251 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + + E A +FE + S + YN M++++ G+ E+ + E+
Sbjct: 295 TYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGEL 354
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K +PD TYN + + A N+D+V+ +E+ +G + + Y ++++Y
Sbjct: 355 VEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEEL-VKAGFKKNEITYNTMIHMYGKMGR 413
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ---KMTS 201
L A L + +++ +TY +I LG DKI + K L K T
Sbjct: 414 LDLAVG--LYDEMRAVGCTPDAVTYTVMI---DSLGKMDKIAEAGKVLEDMADAGLKPTL 468
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
+ ++ +Y G + + D S D A +L F+ G TEK +
Sbjct: 469 VAFSALICAYAKGGRRADAEKTFDCMIASGVKP-DRLAYLVMLDVFARSGETEKMLRLYR 527
Query: 262 LLLQKNCAPTN 272
++ N P +
Sbjct: 528 TMMNDNYRPDD 538
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++N ++ +Y + G ++ V + I + PD TYN I +L ++ L+EM
Sbjct: 922 IFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEM 981
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGL 179
G + Y +L + +A + ++ L E +S + Q Y ++ +Y
Sbjct: 982 G-KRGLTPKLQSYKSL--LAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNA 1038
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
GN K + + ++ + T +++SY G E +++ K S+
Sbjct: 1039 GNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSS 1090
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 18/252 (7%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 85
YT+L+ YA K A ++F ++K+ + YN ++ +Y +G K+ +V+++
Sbjct: 182 YTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDM 241
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD+ TYN IS C A ++ +E+ +G D V Y L+++Y S
Sbjct: 242 KCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKV-AGFRPDAVTYNALLDVY-GKSR 299
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
L + E + + +TY+ L+ Y G + + + K+KM +
Sbjct: 300 RPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGG-------LLEDALVLKRKMVDKGIK 352
Query: 204 -----YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
Y +LS ++ G + E+ ++ ++ +I N L+ + D G E+ +
Sbjct: 353 PDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKP-NICTFNALIKMYGDRGKFEEMVK 411
Query: 259 FHMLLLQKNCAP 270
+ C+P
Sbjct: 412 VFKEIKVCKCSP 423
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T A+L +Y K KA E+ + +S L+ + YN +M +Y K + EI
Sbjct: 602 TSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREI 661
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD+ +YN+ I + +D+ K+ ++EM + D V Y + Y S
Sbjct: 662 LDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPA-PVPDVVTYNTFIAAYAADSM 720
Query: 146 LVNA 149
V A
Sbjct: 721 FVEA 724
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 13/250 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ E+A +LFE +K + +A+ YN ++ +Y + ++ V++++
Sbjct: 252 TYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQM 311
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P + TYN +S+ ++ +M D G D Y L+ S
Sbjct: 312 ESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKM-VDKGIKPDVYTYTTLL------SG 364
Query: 146 LVNAESSTLV-----EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
VNA L E K + T++ LI +Y G +++ +++K +++ K
Sbjct: 365 FVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPD 424
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ +L+ + G EV + ++ K+S + + N L+ A+ G ++A +
Sbjct: 425 IVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAP-ERDTFNTLISAYGRCGSFDQAMAAY 483
Query: 261 MLLLQKNCAP 270
+L+ +P
Sbjct: 484 KRMLEAGVSP 493
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/253 (16%), Positives = 110/253 (43%), Gaps = 11/253 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL +Y ++ ++A E+ ++++ ++ + + YN +++ Y+ G +E ++ ++
Sbjct: 287 TYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKM 346
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD++TY +S + + +EM G + + L+ +Y
Sbjct: 347 VDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMR-KVGCKPNICTFNALIKMYGDRGK 405
Query: 146 LVNAESSTLVEAEKSI----TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+V+ K I +T++ L+ ++ G ++ +++ ++ ++
Sbjct: 406 F-----EEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPER 460
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
+ ++S+Y G + + ++ S D+S N +L + GL E++ +
Sbjct: 461 DTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSP-DLSTYNAVLATLARGGLWEQSEKVLA 519
Query: 262 LLLQKNCAPTNAS 274
+ C P +
Sbjct: 520 EMKDGGCKPNEVT 532
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 81/186 (43%), Gaps = 2/186 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++LLH YA + E+ L E + + +A++ ++ + V + + E
Sbjct: 532 TYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEF 591
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ + PD+ T N +S + + + L+ M +SG + Y +L+ +Y +
Sbjct: 592 RKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMY-ESGLTLSLTSYNSLMYMYSRTEN 650
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+E +K I + I+Y+ +I Y D+ +I + +++ Y
Sbjct: 651 FHKSEQIFREILDKGI-EPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYN 709
Query: 206 CILSSY 211
+++Y
Sbjct: 710 TFIAAY 715
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 105/248 (42%), Gaps = 5/248 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A+L A E++E++ +K N + Y+ ++ Y + +VE++ + EEI
Sbjct: 497 TYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEI 556
Query: 86 KRKNV-VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + L + + L ++ + FL+ G S D +++IY
Sbjct: 557 YSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRK--RGISPDVTTSNAMLSIYGRKK 614
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A E +T +Y+ L+ +Y+ N K +QI++ + + +Y
Sbjct: 615 MVPKANEILNFMYESGLTL-SLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISY 673
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ +Y + E II++ K A D+ N + A++ + +A + ++
Sbjct: 674 NIVIYAYCRNDMMDEAKRIIEEMKVPAPVP-DVVTYNTFIAAYAADSMFVEAIDVIRYMI 732
Query: 265 QKNCAPTN 272
++ C P +
Sbjct: 733 KQGCKPNH 740
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ A +KA+EL+ +++ S+ + + Y +M+ + + G +E V E+
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ TY + + + + +DQ LD M G + Y L++ +
Sbjct: 359 EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRV-RGIVPNLHTYNTLISGLLNLRR 417
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L E+ L +S+ +Y I Y LG+ +K ++ +M K+ +
Sbjct: 418 L--DEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFE--KMKKRGIMPSIA 473
Query: 205 ICILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
C S Y + +G ++E +I + S D N ++ +S G +KA +
Sbjct: 474 ACNASLYSLAEMGRIREAKDIFNDIHNCGLSP-DSVTYNMMMKCYSKAGQIDKATKLLTE 532
Query: 263 LLQKNCAP 270
+L + C P
Sbjct: 533 MLSEGCEP 540
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 4/183 (2%)
Query: 12 RYFEGLP--LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
+ FE +P Y L++ + A A +LF+R+ + + + Y ++
Sbjct: 914 KIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECL 973
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
G+V+ EE+K + PD +YNL I+ + +++ EM + G S +
Sbjct: 974 FMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMK-NRGISPE 1032
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
Y L+ ++ + +V+ E + + TY+ LI ++ GNKD+ ++
Sbjct: 1033 LYTYNALI-LHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVF 1091
Query: 190 KSL 192
K +
Sbjct: 1092 KKM 1094
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TY L+ A +E+A ++FE + N +YN ++ + G V
Sbjct: 890 SPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACD 949
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + + ++ + PD+ +Y + + T +D + +E+ +G D V Y ++N
Sbjct: 950 LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKL-TGLDPDTVSYNLMIN-G 1007
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+ S + S E + + TY+ LI+ + G D+ ++++ L+
Sbjct: 1008 LGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQ 1060
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 11/217 (5%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EGL S KT Y+AL+ + T +L E ++ L N Y + + G+
Sbjct: 221 EGLKPSMKT---YSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGR 277
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
++ +++ ++ + PD+ TY + I + A +D+ K+ +M S D V Y+
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS-HKPDLVTYI 336
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L++ + L + E E +TY IL L K+DQ + L +
Sbjct: 337 TLMSKFGNYGDLETVK-RFWSEMEADGYAPDVVTY---TILVEALCKSGKVDQAFDMLDV 392
Query: 195 TKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWK 228
+ + N Y ++S L L L E E+ + +
Sbjct: 393 MRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A T+ +Y + Y EKA + FE++K+ + + N + +G++ +
Sbjct: 434 APTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKD 493
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ +I + PD TYN+ + + ID+ K L EM G D + +L++
Sbjct: 494 IFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEM-LSEGCEPDIIVVNSLIDTL 552
Query: 141 ITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKI 185
A + E+ + K + +TY+ LI GLG + K+
Sbjct: 553 YKAGRV--DEAWQMFGRLKDLKLAPTVVTYNILI---TGLGKEGKL 593
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T E+Y L+ G TE A +LF +K + N YN ++ + +++++ +
Sbjct: 786 PTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFEL 845
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 112
E+ + P+I T+N+ IS+ + +I++
Sbjct: 846 YNEMLCRGCKPNIITHNIIISALVKSNSINK 876
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/199 (18%), Positives = 76/199 (38%), Gaps = 2/199 (1%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+ TY + + +A +++Q+ NA YN ++ + G ++ V
Sbjct: 155 RNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKV 214
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ + + + P + TY+ + + + + L+EM G + Y + +
Sbjct: 215 YKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEME-TLGLRPNIYTYTICIRVLG 273
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
A + +A L E +TY LI G DK +++ +R + K
Sbjct: 274 RAGRIDDA-YGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDL 332
Query: 202 RNYICILSSYLMLGHLKEV 220
YI ++S + G L+ V
Sbjct: 333 VTYITLMSKFGNYGDLETV 351
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 37/290 (12%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+ G+ E Y +P S + Y LL A +KAEE+F ++K A
Sbjct: 224 KLRGLRMAENYIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKMKDLEFPITAFAC 283
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N+++ LY + KVA ++ ++++NV P FTY + I + + +I +++ +D M
Sbjct: 284 NQLLLLYKRTDK-RKVADILLLMEKENVKPSRFTYRILIDTKGLSNDITGMEQVVDTMKA 342
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ G + V ++++ + + L + + L E E+ ++ L+ LY L +
Sbjct: 343 E--GIELDVSTLSVLAKHYISGGLKDKAKAILKEMEEINSEGSRWPCRILLPLYGELQME 400
Query: 183 DKIDQIWK--------------------------------SLRMTKQKMTSRNYICILSS 210
D++ ++W+ + T +K+++R+Y +L+
Sbjct: 401 DEVRRLWEICGSNPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKLSARHYSTMLNV 460
Query: 211 YLMLGHLKEVG-EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
Y + G E++ Q +S S D + ++ + + G EKA+ F
Sbjct: 461 YREDSKMLTKGKEVVKQMAESG-SRMDPVTLDAVVKLYVEAGEVEKADSF 509
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 27 YTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT+L+H L KW +KAEEL + + N + +N ++ + G+V + + + +
Sbjct: 449 YTSLIHGLCTCDKW-DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R V PDI TYN I C +D+ K L M G D V Y L+N Y S
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM-VSVGVKPDIVTYGTLINGYCRVSR 566
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
+ +A + E S ITY+ ++
Sbjct: 567 MDDA-LALFKEMVSSGVSPNIITYNIIL 593
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++++ A+ +KA E+ + ++ + + + YN ++ Y S GQ ++ ++++
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V P++ TY+ ++ + +K D M+ G D Y L+ Y T
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT-KRGLEPDIATYRTLLQGYATKGA 356
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV + + I Q ++ LI YA ++K+DQ +Q + N +
Sbjct: 357 LVEMHALLDLMVRNGI-QPDHHVFNILICAYA---KQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 206 C 206
C
Sbjct: 413 C 413
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 87/205 (42%), Gaps = 9/205 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERV---KQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+Y LL +++A EL + + + + YN ++ + G +K
Sbjct: 165 SYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E+ + ++PD+ TY+ I++ +D+ + L+ M +G D + Y ++++ Y +
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM-VKNGVMPDCMTYNSILHGYCS 283
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS- 201
+ A TL + + +TY L+ G + +I+ S MTK+ +
Sbjct: 284 SGQPKEA-IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS--MTKRGLEPD 340
Query: 202 -RNYICILSSYLMLGHLKEVGEIID 225
Y +L Y G L E+ ++D
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLD 365
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 13 YFEGLPLSAKTSE--TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
YFE + T YT+L+H L KW +KAEEL + + N + +N ++ +
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKW-DKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
G+V + + + + R V PDI TYN I C +D+ K L M G D
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM-VSVGVKPD 550
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
V Y L+N Y S + +A + E S ITY+ ++
Sbjct: 551 IVTYGTLINGYCRVSRMDDA-LALFKEMVSSGVSPNIITYNIIL 593
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++++ A+ +KA E+ + ++ + + + YN ++ Y S GQ ++ ++++
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V P++ TY+ ++ + +K D M+ G D Y L+ Y T
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT-KRGLEPDIATYRTLLQGYATKGA 356
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV + + I Q ++ LI YA ++K+DQ +Q + N +
Sbjct: 357 LVEMHALLDLMVRNGI-QPDHHVFNILICAYA---KQEKVDQAMLVFSKMRQHGLNPNVV 412
Query: 206 C 206
C
Sbjct: 413 C 413
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 14/259 (5%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ + FG+ R F+ P YT L+ + A + LF ++++ N
Sbjct: 184 LKEAFGVIEMMRKFKFRP----AFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVH 239
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ ++ ++ G+++ +++E+K + D+ YN+ I +D KF EM
Sbjct: 240 LFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEM 299
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
DD V Y L+ + A L E+ L E E + + Y + ++ G G
Sbjct: 300 KAQGLVPDD-VTYTTLIGVLCKARRL--DEAVELFE-ELDLNRSVPCVYAYNTMI-MGYG 354
Query: 181 NKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
+ K D+ + L K+K + Y CIL+ G ++E I D+ +Q A ++
Sbjct: 355 SAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP--NL 412
Query: 238 SACNRLLGAFSDVGLTEKA 256
+ N L+ G E A
Sbjct: 413 TTYNILIDMLCKAGELEAA 431
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 101/247 (40%), Gaps = 8/247 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + A+ ++A ELFE + + YN M+ Y S G+ ++ ++E
Sbjct: 310 TYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQ 369
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KRK +P + YN ++ +++ + DEM D+ + + Y L+++ A
Sbjct: 370 KRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA--APNLTTYNILIDMLCKAGE 427
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A E + +T + +I D+ I+ L SR +
Sbjct: 428 LEAALKVQDTMKEAGLFP-NIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFC 486
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSD--FDISACNRLLGAFSDVGLTEKANEFHMLL 263
++ LG V + +++ SD ++ L+ F G E ++ + +
Sbjct: 487 SLIDG---LGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543
Query: 264 LQKNCAP 270
+ + C+P
Sbjct: 544 VHRGCSP 550
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 7 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ G FE + + +Y+ L+H A ++ + +LF +K+ L + L YN
Sbjct: 568 VEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNT 627
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
++ + G+V+K ++EE+K K + P + TY + A +D+ +E
Sbjct: 628 VIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 8/211 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT+L+ + E ++++ + S + ++ N M G+VEK + EEI
Sbjct: 519 VYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEI 578
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + +VPD+ +Y++ I + K EM + G D + Y +++ + +
Sbjct: 579 KAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK-EQGLHLDVLAYNTVIDGFCKSGK 637
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
V+ L E + Q +TY ++ GL D++D+ + K N
Sbjct: 638 -VDKAYQLLEEMKTKGLQPTVVTYGSVV---DGLAKIDRLDEAYMLFEEAKSIGVDLNVV 693
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y ++ + +G + E I+++ Q +
Sbjct: 694 IYSSLIDGFGKVGRIDEAYLILEELMQKGLT 724
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 50/92 (54%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L++
Sbjct: 656 TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLIL 715
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 114
EE+ +K + P+ +T+N + + ID+ +
Sbjct: 716 EELMQKGLTPNSYTWNCLLDALVKAEEIDEAQ 747
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S T+ LL A+ ++A+ F+ +K S NA+ Y+ M+ + + K + +
Sbjct: 727 SYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQ 786
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++++ + P+ TY I+ A N+ + + D SGG D Y ++ +A
Sbjct: 787 EMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKA-SGGVPDSACYNAMIEGLSSA 845
Query: 144 SHLVNA 149
+ ++A
Sbjct: 846 NKAMDA 851
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++H YA T KA E F +++ L + Y ++ G+++ V +E+
Sbjct: 658 TYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEM 717
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+N+ + F YN+ I A ++ + + +M G D Y + +N A
Sbjct: 718 SAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMK-QGGVKPDIHTYTSFINACCKAGD 776
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ A S + E E S + TY LI +A +K + ++ +++ K Y
Sbjct: 777 MLRA-SKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYH 835
Query: 206 CILSSYL 212
C++++ L
Sbjct: 836 CLMTALL 842
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ Y ++AE L ++ + +Y+ MM Y VG EK V E +K
Sbjct: 414 YGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLK 473
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
P + +Y I+ A I + + + +M +G + Y L+N ++
Sbjct: 474 ECGFAPSVVSYGCLINLYAKVGKISKALE-VSKMMESAGIKHNMKTYSMLINGFLKLKDW 532
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
NA + + K + + Y+ +I + G+G D+ + K ++ + + TSR ++
Sbjct: 533 ANA-FAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMP 591
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSA 231
I+ + G +K ++ D ++S
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSG 616
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Query: 7 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+H + FE + TS YT+L+H YA + E+A ++K+ + + + Y+
Sbjct: 322 MHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSI 381
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ + +G + +E K ++ + Y I + T N+DQ + + EM +
Sbjct: 382 IVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGE- 440
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK---SITQRQWITYDFLIILYAGLGN 181
G D +++ + + +V E L E+ ++Y LI LYA +G
Sbjct: 441 -GID---APIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGK 496
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K ++ K + K + Y +++ +L L I + + D+ N
Sbjct: 497 ISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKP-DVVLYN 555
Query: 242 RLLGAFSDVGLTEKA 256
++ AF +G ++A
Sbjct: 556 NIIRAFCGMGTMDRA 570
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 105/234 (44%), Gaps = 3/234 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
TS T+ ++H +A A ++A ++F+ +++S +N ++ + Q+EK ++
Sbjct: 585 TSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEIL 644
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E+ V P+ TY + AA + + ++ ++ D G D Y L+
Sbjct: 645 DEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLR-DEGLQLDVYTYEALLKACCK 703
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ + +A + T + ++I + ++ Y+ LI +A G+ + + + ++ K
Sbjct: 704 SGRMQSALAVTKEMSAQNIPRNTFV-YNILIDGWARRGDVWEAADLMQQMKQGGVKPDIH 762
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +++ G + +++++ + S ++ L+ ++ L EKA
Sbjct: 763 TYTSFINACCKAGDMLRASKMMEEMETSGVKP-NVKTYTTLIHGWARASLPEKA 815
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/241 (18%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
+ + Y ++ YA +A + FE ++ + + +Y ++ Y +E+
Sbjct: 301 IKKPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEA 360
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++K + V + TY++ + A N D ++ E D + + Y N++
Sbjct: 361 LSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAK-DRHSHMNAIIYGNMIY 419
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
Y ++ AE + + E E Y ++ Y +GN++K +++ L+
Sbjct: 420 AYCQTCNMDQAE-ALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFA 478
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
+ +Y C+++ Y +G + + E + + +SA ++ + L+ F + L + AN
Sbjct: 479 PSVVSYGCLINLYAKVGKISKALE-VSKMMESAGIKHNMKTYSMLINGF--LKLKDWANA 535
Query: 259 F 259
F
Sbjct: 536 F 536
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 5/232 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K I R +EG TYTA++ A +A ++F+ + + + + Y
Sbjct: 87 KALEIFESMRLYEG---CVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTY 143
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N ++ Y G +V V+ ++ NV PD T+N I I ++++ + +
Sbjct: 144 NILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGL-L 202
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
G D V +L++ Y TA ES T + + ITY+ ++ Y G
Sbjct: 203 RQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTR-ITYNIIMEAYGRAGMV 261
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 234
D++++ WK ++ K S + +LS+Y G+ V +++ Q + +D
Sbjct: 262 DQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAAD 313
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ ++A A + E A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 436 TYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 495
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P++ TYN+ I+ A N D V K +M +G D + Y ++ + H
Sbjct: 496 IENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQV-AGFRPDKITYSIVMEVLGHCGH 554
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
L AE + +E + + + Y L+ L+ GN DK
Sbjct: 555 LDEAE-AVFIEMRRDWAPDEPV-YGLLVDLWGKAGNVDK 591
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 95/280 (33%), Gaps = 35/280 (12%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TYT ++ + A+ L + + + YN ++ Y + + V EE
Sbjct: 365 HTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEE 424
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ PD TY I A ++ M + G S D Y +VN
Sbjct: 425 MEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQ-EVGLSPDTFTYSAMVNCLGKGG 483
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A E T +TY+ +I L A N D + ++++ +++ + Y
Sbjct: 484 QLAAAYKLFCEMIENGCTP-NLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITY 542
Query: 205 ICILSSYLMLGHLKEV------------------GEIIDQWKQSATSD------------ 234
++ GHL E G ++D W ++ D
Sbjct: 543 SIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQD 602
Query: 235 ---FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
++ CN LL AF + + A +L + P+
Sbjct: 603 GLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPS 642
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 2/205 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ Y +KAE L +++ + +Y+ MM Y VG +K LV E K
Sbjct: 419 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFK 478
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P + TY I+ A + + + EM +G + Y L+N ++
Sbjct: 479 ECGLNPSVITYGCLINLYAKLGKVSKALEVSKEME-HAGIKHNMKTYSMLINGFLKLKDW 537
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
NA + + K + + Y+ +I + G+G D+ K ++ + K T+R ++
Sbjct: 538 ANA-FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMP 596
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSA 231
I+ + G +K+ ++ D + S
Sbjct: 597 IIHGFARKGEMKKALDVFDMMRMSG 621
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EGL L T Y ALL + + A + + + N+ N +YN ++ + G
Sbjct: 690 EGLQLDVYT---YEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGD 746
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK-Y 133
+ + A +++++KR+ V PDI TY +I++C+ ++ + K ++EM S G VK Y
Sbjct: 747 IWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK--SVGVKPNVKTY 804
Query: 134 VNLVNIYITAS 144
L+N + AS
Sbjct: 805 TTLINGWARAS 815
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 4/188 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++H YA T KA F +++ L + Y ++ G+++ V +E+
Sbjct: 663 TYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEM 722
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+N+ + F YN+ I A +I + + +M + G D Y + +N A
Sbjct: 723 SAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKRE-GVQPDIHTYTSFINACSKAGD 781
Query: 146 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A + +E KS+ + + TY LI +A +K ++ ++++ K Y
Sbjct: 782 MQRA--TKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVY 839
Query: 205 ICILSSYL 212
C+++S L
Sbjct: 840 HCLMTSLL 847
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 11/260 (4%)
Query: 2 TKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 59
T+ +H FE + +S YT L+H YA + E+A ++K+ + +
Sbjct: 322 TRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSL 381
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+ Y+ +++ + G E +E K K+ + Y I + N+D+ + + E
Sbjct: 382 VTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVRE 441
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK---SITQRQWITYDFLIILY 176
M + G D +++ + + +V E L+ E+ ITY LI LY
Sbjct: 442 M--EEEGID---APIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLY 496
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
A LG K ++ K + K + Y +++ +L L I + + D
Sbjct: 497 AKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKP-D 555
Query: 237 ISACNRLLGAFSDVGLTEKA 256
+ N ++ AF +G ++A
Sbjct: 556 VVLYNNIITAFCGMGKMDRA 575
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY AL+ + EKAE++ + + + +S N Y +M Y S+G K
Sbjct: 625 TVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYF 684
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+++ + + D++TY + +C + + EMS
Sbjct: 685 TKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMS 723
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 104/240 (43%), Gaps = 15/240 (6%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ T+ ++H +A +KA ++F+ ++ S YN ++ + ++EK ++
Sbjct: 590 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 649
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E+ V P+ TY + A+ + + + ++ D G D Y L+
Sbjct: 650 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLR-DEGLQLDVYTYEALLKACCK 708
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ----- 197
+ + +A + T + ++I + +I Y+ LI +A G+ IW++ + +Q
Sbjct: 709 SGRMQSALAVTKEMSAQNIPRNTFI-YNILIDGWARRGD------IWEAADLMQQMKREG 761
Query: 198 -KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ Y +++ G ++ + I++ K S ++ L+ ++ L EKA
Sbjct: 762 VQPDIHTYTSFINACSKAGDMQRATKTIEEMK-SVGVKPNVKTYTTLINGWARASLPEKA 820
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 15/261 (5%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+F + + ++E ++TYT LL + + E+ LFE + L +Y
Sbjct: 100 KIFELLRKQHWYE------PRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVY 153
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+++ Y GQ++K +V E+K PD++TY++ I+ C + ++ L EMS
Sbjct: 154 TALVSAYGKSGQLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFELIRGILAEMS 213
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
G V Y +++ Y A E++ E + T++ +I Y G
Sbjct: 214 Y-LGIECSTVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKGR 272
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSY---LMLGHLKEVGEIIDQWKQSATSDFDIS 238
DK+++ + ++ + + + ++ SY M G ++ V E +++ S + I
Sbjct: 273 IDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPS----IV 328
Query: 239 ACNRLLGAFSDVGLTEKANEF 259
N + F G E E+
Sbjct: 329 THNIFIETFGKAGDIETMEEY 349
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 4/214 (1%)
Query: 58 NALMYNEMMTLYMSVGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKF 116
+ + YN ++ Y E++ + + I+ + VPD+FT+N I + + ID+++K+
Sbjct: 220 STVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKMEKW 279
Query: 117 LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILY 176
E D +K N++ + + S L EK +T++ I +
Sbjct: 280 YTEFQLMGLRQD--IKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETF 337
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
G+ + +++ + ++ K + Y ++S+Y GH+ +V I+ Q + S D
Sbjct: 338 GKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSILRQVENSDVI-LD 396
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N ++ A+ G EK +E + + + C P
Sbjct: 397 TPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKP 430
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +++ Y +K E+ + + L + +N ++ Y G K+ V+E +
Sbjct: 259 TFNSIIGAYGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFM 318
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ P I T+N++I + +I+ ++++ +M G + V Y +LV+ Y A H
Sbjct: 319 EKRFFSPSIVTHNIFIETFGKAGDIETMEEYFSKMK-HLGIKPNTVTYCSLVSAYSKAGH 377
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ + S L + E S ++ +I Y G+ +K+ +++ + K K S +
Sbjct: 378 IMKVD-SILRQVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKPDSITFA 436
Query: 206 CILSSY 211
++ +Y
Sbjct: 437 TMIQAY 442
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+GL + K+ E LLH+ A + N S N + Y+ ++ + G+
Sbjct: 173 KGLCVEKKSQEALELLLHMTADGGY--------------NCSPNVVSYSTIIDGFFKEGE 218
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
V+K + +E+ + PD+ TY+ I +++ + L M D G + Y
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMF-DKGVMPNTRTYN 277
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
++ Y + L A L + S Q +TY LI Y +G + ++ S+
Sbjct: 278 IMIRGYCSLGQLEEA-VRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVR 336
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
QK S Y +L Y G L +V +++D + F+ A N L+ A++ G +
Sbjct: 337 KGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP-FEHRAFNILICAYAKHGAVD 395
Query: 255 KA 256
KA
Sbjct: 396 KA 397
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+ A+ KAE + + + + N YN M+ Y S+GQ+E+ +++++
Sbjct: 240 TYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM 299
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ TY L I + + D M G + Y L++ Y T
Sbjct: 300 SGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSM-VRKGQKPNSTIYHILLHGYATKGA 358
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L++ + I ++ LI YA G DK + +R + +Y
Sbjct: 359 LIDVRDLLDLMIRDGIPFEHR-AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYS 417
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +G +++ +Q S +I + L+ +G +K E ++
Sbjct: 418 TVIHILCKIGRVEDAVYHFNQMVSEGLSP-NIISFTSLIHGLCSIGEWKKVEELAFEMIN 476
Query: 266 KNCAP 270
+ P
Sbjct: 477 RGIHP 481
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++ + A+ +KAE + ++ + + + YN M+ Y +GQ ++ A + E+
Sbjct: 264 TYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREM 323
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ ++PDIFT N ++SS + +F D M+ G D V Y L++ Y +
Sbjct: 324 TRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA-KGHKPDLVTYSVLLHGYAAEGY 382
Query: 146 LV------NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+V N+ + A+ S+ Y+ LI Y G D+ I+ ++
Sbjct: 383 VVDMLNLFNSMEGNGIVADHSV-------YNILIDAYGKRGMMDEAMLIFTQMQERGVMP 435
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQ 229
+ Y +++++ +G L + +D++ Q
Sbjct: 436 DAWTYGTVIAAFSRMGRLADA---MDKFNQ 462
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERV--KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y+ +L +++A +L + K S N + YN ++ + G+V K +
Sbjct: 192 SYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFH 251
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+ ++ VVPD+ TY+ +I + +D+ + L +M +G D V Y +++ Y
Sbjct: 252 EMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM-ISNGFEPDKVTYNCMIHGY 307
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 10/205 (4%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P + Y A++ +Y+ + KA+EL + ++Q + + +N ++ + G +
Sbjct: 219 PTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTP 278
Query: 78 --VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V +++ ++ + PD TYN +S+C+ N++ K ++M D W Y
Sbjct: 279 NLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWT-YNA 337
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-- 193
++++Y AE +E E +TY+ L+ +A N +K+ ++++ ++
Sbjct: 338 MISVYGRCGLAAEAE-RLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 194 -MTKQKMTSRNYICILSSYLMLGHL 217
K +MT Y I+ Y G L
Sbjct: 397 GFGKDEMT---YNTIIHMYGKQGQL 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ +Y +AE LF ++ S +A+ YN ++ + EKV V +++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ D TYN I +D + +M SG + D + Y L++ A+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V A ++ + E + TY LI YA G +++ + + + + K + Y
Sbjct: 454 SVEA-AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 206 CILSSYL 212
+L L
Sbjct: 513 VMLDVLL 519
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 104/223 (46%), Gaps = 3/223 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +Y + +K ++++R+K+S L + YN ++ +Y + E+ ++++++
Sbjct: 930 WNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMR 989
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P + TY IS+ ++Q ++ +E+ G D Y ++ I +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE L + + + T L++ Y+ GN + +++ +L+ T+ ++T+ Y
Sbjct: 1049 SKAEK-LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSS 1107
Query: 207 ILSSYLMLGHLKE-VGEIIDQWKQSATSDFDISACNRLLGAFS 248
++ +YL K + +++ K+ D I C +FS
Sbjct: 1108 VIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFS 1150
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 37 AKWTEK--AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
+W ++ A E+F R + + +YN MM +Y G+ K +++ ++++ VPD+
Sbjct: 202 GRWNQESLAVEIFTRA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDL 260
Query: 95 FTYNLWISSC--AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 152
++N I++ + L + V + LD M +SG D + Y L++ S+L A
Sbjct: 261 ISFNTLINARLKSGGLTPNLVVELLD-MVRNSGLRPDAITYNTLLSACSRDSNLEGA-VK 318
Query: 153 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 212
+ E Q TY+ +I +Y G + ++++ L + + Y +L ++
Sbjct: 319 VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFA 378
Query: 213 MLGHLKEVGEIIDQWKQ 229
+ ++V E+ Q ++
Sbjct: 379 RERNTEKVKEVYQQMQK 395
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ + K E+AE+LFE + L + Y+ MM + G K +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+K + P + T +L + S +++ N + +K L +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 24/239 (10%)
Query: 45 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 104
EL + V+ S L +A+ YN +++ +E V E+++ PD++TYN IS
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 105 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSIT 162
+ ++ E+ G S D V Y +L+ + N E V + +K
Sbjct: 343 GRCGLAAEAERLFIELEL-KGFSPDAVTYNSLLYAFARER---NTEKVKEVYQQMQKMGF 398
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM--LGHLKE- 219
+ +TY+ +I +Y G D Q++K ++ ++ RN I + L+ LG
Sbjct: 399 GKDEMTYNTIIHMYGKQGQLDLALQLYKDMK----GLSGRNPDAITYTVLIDSLGKANRS 454
Query: 220 ------VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+ E++D + + C ++ G E+A + +L+ P N
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALIC-----GYAKAGKREEAEDTFSCMLRSGTKPDN 508
>gi|356577073|ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 581
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
++ T+T +LH +A++LF+ ++ ++ NA MYN +M Y V +V + +L+
Sbjct: 298 PSAATFTTILHALCREGNVVEAQKLFDGIQDVGIAPNAAMYNTLMDGYFKVREVGQASLL 357
Query: 82 VEEIKRKNVVPDIFTYNLWISS 103
EE++RK V PD T+N+ +
Sbjct: 358 YEEMRRKGVSPDCVTFNILVGG 379
>gi|356557985|ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 692
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 3/207 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T + +++ YA +KA L++R K N S +A+ ++ ++ +Y G +K V +E+
Sbjct: 228 TCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEM 287
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V P++ TYN + + + Q K EM +G S D++ Y +L+ +Y A
Sbjct: 288 KVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMK-SNGVSPDFITYASLLEVYTRAQC 346
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 204
+A E + + Y+ L+ + A +G D+ +I+ ++ + + S +
Sbjct: 347 SEDA-LGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTF 405
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSA 231
+++ Y G + EV ++++ QS
Sbjct: 406 SSLITIYSRSGKVSEVEGMLNEMIQSG 432
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALV 81
T++ Y LL + A +T++A E+F +K S ++ ++ ++T+Y G+V +V +
Sbjct: 365 TADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGM 424
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ E+ + P IF I D V K ++
Sbjct: 425 LNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQL 463
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
+ + Y ++ + G +EK ++ ++ + VP++ TY+ + ++DQ
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
M+ G + V Y L++ + A+H V+A + E + ++Y+ L+ Y
Sbjct: 248 RRMT-SKGCVPNVVTYTTLIH-GLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
LG ++ Q++K + K + R Y C++ + L+E +++ K +A D D
Sbjct: 306 RLGRIEEAKQLFKEM-AAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ + ++ +S +A EF ++ +N AP
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 398
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H A + A L + + + + + YN ++ Y +G++E+ + +E+
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEM 320
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ +PD TY + +++ + L+ M +G D V Y +V Y A
Sbjct: 321 AAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 380
Query: 146 LVNA 149
V A
Sbjct: 381 FVEA 384
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 147
K+V PD+ TY+ I+ +D+ + L EM G + D V Y ++V+ +
Sbjct: 39 KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMD 98
Query: 148 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI-C 206
A + E + + T+ LI G N K+D+ +L++ K+ +TS +
Sbjct: 99 RA-CEMVREMKLKGVEPDKFTFSALI---TGWCNARKVDE---ALKLYKEILTSSCRLDA 151
Query: 207 ILSSYLMLGHLKE--VGEIID-----QWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ SS L+ G +E +GE + + ++ D+ L+ F G EKA +
Sbjct: 152 VSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKM 211
Query: 260 HMLLLQKNCAP 270
++ + C P
Sbjct: 212 LGVMEGRKCVP 222
>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 225
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E+Y L+ A E A ELFE++ Q L + + YN M+ + VGQV+K ++ E+
Sbjct: 87 ESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEK 146
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ PDI TYN + + D+V K L +M
Sbjct: 147 MEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182
>gi|224081503|ref|XP_002306437.1| predicted protein [Populus trichocarpa]
gi|222855886|gb|EEE93433.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ AK +A+ L +K+ L +A +YN +M Y + + + + +++
Sbjct: 231 TYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQM 290
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + V PD+ TYN I + + + KK L M +SG D V Y +L+N
Sbjct: 291 KEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIM-VESGHFPDAVTYTSLMNGMCREGD 349
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ A ++ L E E TY+ L+ + +K +++ ++ K+ + +Y
Sbjct: 350 VLGA-AALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYA 408
Query: 206 CILSSYLMLGHLKEVGEIID 225
+ + G + E E+ D
Sbjct: 409 TFVRALCREGRVAEAYEVFD 428
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
S G+V+ L+V+E K+ PD FTYN + + + V F+DEM D
Sbjct: 170 SAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDL 229
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V Y L++ A ++ A+ V E + ++ Y+ ++ Y L + +I+K
Sbjct: 230 VTYTILIDNVCNAKNIREADRLVAVLKECGLKPDAFL-YNTIMKGYCLLNKGIEAVRIYK 288
Query: 191 SLR 193
++
Sbjct: 289 QMK 291
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + TY+AL+ + ++A L E + + + + YN ++T + +V++
Sbjct: 106 AANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHG 165
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+E++ + PDI TY I + ++ + + L E++ G + D V Y +++
Sbjct: 166 FMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT-RRGFTPDIVTYSTVIDGL 224
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A L +A + E S ITY+ LI Y G+ D+ ++ + K
Sbjct: 225 CKAGRLRDAVD---IFEEMSCAP-TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD 280
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y ++S++ +G L + E+ Q + S D+ L+ G E A E
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSP-DVVTFTSLVDGLCGEGRMEDALELL 339
Query: 261 MLLLQKNCAPT 271
+ ++ C PT
Sbjct: 340 EEITRRGCPPT 350
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 81/211 (38%), Gaps = 35/211 (16%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+L+ G E A EL E + + YN ++ Y QV K +V +
Sbjct: 318 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADF 377
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS--------------------CDSG 125
+ + VP+ TYN+ ++ C DQ ++LD+++ C G
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 437
Query: 126 GSDDWVKYVN--LVNIYITASHLVNAESSTLVEAEKSITQRQWI-------------TYD 170
+DD V++ + Y+ A+ L +A + + + T D
Sbjct: 438 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 497
Query: 171 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
++ Y G K D++ LR+ K +S
Sbjct: 498 AVVSAYCRAGMIQKADELASELRLYTDKSSS 528
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + + A ELF+++ + LS + + + ++ G++E ++EEI
Sbjct: 283 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342
Query: 86 KRKNVVPDIFTYNLWISS-CAATLNIDQVKK 115
R+ P I+TYN + C A +QV+K
Sbjct: 343 TRRGCPPTIYTYNCVVDGYCKA----NQVRK 369
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y LL ++A+ +F + + +A Y+ + Y V+ V++++
Sbjct: 253 AYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKM 312
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R N++P++FTYN I ++++ LDEM D W N + Y
Sbjct: 313 RRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWS--YNAIQAYHCDHC 370
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
VN + EK TY+ ++ L +G DK+ ++W ++
Sbjct: 371 EVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNM 417
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 118/299 (39%), Gaps = 44/299 (14%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 158 FHDLPADSRTALSYTSLIAAYARNALHEEARALLDQMKAAGVAPTAATYNTVLAACARAT 217
Query: 74 ----QVEKVALVVEEIKR---KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
+ + + E++ V PD+ TYN +++ A DQ + L M ++G
Sbjct: 218 DPPVPFDMLLGLFAEMRHDVSPAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRAM-LEAGV 276
Query: 127 SDDWVKYVNLVNIYITASH-------------------------LVNAESSTLVEAEKSI 161
D Y ++V+ + A L+ A + AE
Sbjct: 277 LPDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVA 336
Query: 162 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 212
RQ TY L+ LY G D + ++++ +R T+ Y + S +
Sbjct: 337 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAVPPDTA-TYNVLFSVFG 395
Query: 213 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
G KEV E+ ++ + D+ C +L A GL E A E + ++ PT
Sbjct: 396 DGGFFKEVVELFHDMLRTGI-EPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMVPT 453
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL + A E A++L + + + YN + GQ++ V EE+
Sbjct: 321 TYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEM 380
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V P++ TY+ + A ++ +EM S D V Y LV IY +
Sbjct: 381 SSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDR-VSYNTLVGIYEKLGN 439
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A E E+S R +TY+ L+ Y G D++ ++++ ++ + Y
Sbjct: 440 LDEA-IEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYS 498
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ Y +E ++ ++K A + D+ + ++ GL E + M +++
Sbjct: 499 TMIDMYTKGEMFQEAMDVYREFKM-ARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMME 557
Query: 266 KNCAP 270
K P
Sbjct: 558 KGIKP 562
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 26 TYTALLHLYAGAKWTEKAE---ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
TY +++ AGAK + + ++ + + L + L YN ++++ S G E ++
Sbjct: 285 TYNSIID--AGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLL 342
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E+ + +VPD+FTYN ++ + ID ++ +EMS + V Y +++ Y
Sbjct: 343 SEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWP-NVVTYSAMMDGYAK 401
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
A+ L +A + +S+ + ++Y+ L+ +Y LGN D+ + K + +
Sbjct: 402 ANLLEDALNLYEEMKLRSVCLDR-VSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVV 460
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWK 228
Y +LS Y G EV + ++ K
Sbjct: 461 TYNALLSGYGKHGMYDEVRRLFEEMK 486
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 37/260 (14%)
Query: 46 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 105
LFER + ++ M++ + G+ + + VVP++ TYN I + A
Sbjct: 235 LFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGA 294
Query: 106 -ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT------ASHLV----------- 147
++ D V KF DEM + G D + Y +L+++ + A L+
Sbjct: 295 KGEVSFDVVVKFYDEMIAN-GLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPD 353
Query: 148 ----NAESSTLVEA----------EKSITQRQW---ITYDFLIILYAGLGNKDKIDQIWK 190
N TL +A E+ ++R W +TY ++ YA + +++
Sbjct: 354 VFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYE 413
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
+++ + +Y ++ Y LG+L E E + ++S + D+ N LL +
Sbjct: 414 EMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINR-DVVTYNALLSGYGKH 472
Query: 251 GLTEKANEFHMLLLQKNCAP 270
G+ ++ + +N P
Sbjct: 473 GMYDEVRRLFEEMKARNIYP 492
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 5/246 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT ++ A +K ++A ELFE++K + S N + Y ++ + G++E E++
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424
Query: 86 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ VP TY + I C A + D K F E G D + Y L++ + AS
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF--EQMVQKGCVPDTITYTTLIDGFSKAS 482
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A V K + +TY ++ + L ++ ++ +R + +
Sbjct: 483 KMDEARKLLDVMLTKG-PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+LS YL G +E +++ + + D+ L+ G +A ++
Sbjct: 542 TSLLSYYLSKGRAEEAYQVLTEMTARGCAP-DVILYTSLIDLLFSTGRVPEARHVFDSMI 600
Query: 265 QKNCAP 270
+K CAP
Sbjct: 601 EKGCAP 606
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 102/255 (40%), Gaps = 16/255 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT+L+ L +A +F+ + + + +AL Y ++ + +G VE ++E +
Sbjct: 576 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ V PD F YN + +DQ D M SG + V + L++
Sbjct: 636 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA-SGIKPNAVTFNVLMHGLFKDGKT 694
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
A S EK ++Y LI GLG ++ + + Q+M R I
Sbjct: 695 DRAFSLFKEMLEKDEVPPTLVSYTILI---DGLGKAGRVSEAFSQF----QEMIDRGIIP 747
Query: 207 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+Y L G + E ++++ + + D+ A + L+ D + + A +
Sbjct: 748 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNP-DVQAYSALITGLIDSSMVDTAWDV 806
Query: 260 HMLLLQKNCAPTNAS 274
++++ CAP +
Sbjct: 807 FQEMMKRGCAPNEVT 821
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T+ TY +++H + +A+E+ ++++ ++ +++ Y+S G+ E+ V
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ E+ + PD+ Y I +T + + + D M + G + D + Y ++ +
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKGCAPDALTYGTIIQNFS 619
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ V A L KS Y+ L+ Y L +++DQ +
Sbjct: 620 KIGN-VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL---ERVDQAF 663
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 96/230 (41%), Gaps = 4/230 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
E+A + + + + L + + N ++ +++K + E+ P I +YN
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
IS A+ +D+ KF + M D+G D + + L++ + A L +A K
Sbjct: 62 ISGLASIDKMDEAYKFFNSM-IDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
++ Y +I Y G+ D +I + + + Y ++ LG + E
Sbjct: 120 FRPDVFL-YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
E+ ++ ++S D L+ A S+ G ++A E + ++++ P
Sbjct: 179 YELFERMRKSGCLG-DYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+ L+ +A +EKA LF ++ + ++FN Y ++ L++S +++ + + +K
Sbjct: 528 YSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMK 587
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
V PD Y ++ T + + + DEMS G S + V Y +N Y+ +
Sbjct: 588 ESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMS-REGCSPNVVTYTCFINEYLKLNK- 645
Query: 147 VNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 203
N ++ L E E+ + Q I Y LI + G ++ + ++ M ++ + N
Sbjct: 646 -NNQAHKLYEKMKERGVYPDQ-ILYTMLIAAFCNTGEMNRAEALFDE--MKQEGRCTPNV 701
Query: 204 --YICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y C+++SY+ L + ++ ++ + S
Sbjct: 702 VMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y+ L+ + ++A E+F+ ++ S + N Y+ ++ + G+V+K V EE+
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++PD+++Y++ I ++D KF +EM+ + S Y +L+ Y +
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMT-SNNFSPSAFNYCSLIKGYYKSKQ 435
Query: 146 LVNA 149
NA
Sbjct: 436 FANA 439
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TYT L++L+ + A LF+ +K+S + + + Y ++ + + G++ + + +E
Sbjct: 561 KTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDE 620
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ R+ P++ TY +I+ +Q K ++M + G D + Y L+ +
Sbjct: 621 MSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMK-ERGVYPDQILYTMLIAAFCNTG 679
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+ AE+ ++ + Y LI Y L +D+ +++++ +R
Sbjct: 680 EMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMR 728
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 4/242 (1%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
+L +Y KA L E+ +++ + FN YNE + EK ++ + ++N
Sbjct: 461 ILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRN 520
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
V+PD+ Y+ IS A LN ++ +M+ G + + Y L+N++I+ + A
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMT-KVGITFNVKTYTILINLFISDCKMDVA 579
Query: 150 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 209
E + Q I Y L+ + G + ++ + Y C ++
Sbjct: 580 YRLFKGMKESRVYPDQ-IAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638
Query: 210 SYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHMLLLQKNC 268
YL L + ++ ++ K+ D L+ AF + G +A F + + C
Sbjct: 639 EYLKLNKNNQAHKLYEKMKERGVYP-DQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRC 697
Query: 269 AP 270
P
Sbjct: 698 TP 699
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Query: 12 RYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
R F+G+ S + YT+L+ + +A LF+ + + S N + Y + Y
Sbjct: 581 RLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEY 640
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+ + + + + E++K + V PD Y + I++ T +++ + DEM + + +
Sbjct: 641 LKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPN 700
Query: 130 WVKYVNLVNIYITASHLVNAE 150
V Y L+N YI + AE
Sbjct: 701 VVMYTCLINSYIKLNKRDQAE 721
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ + A+++ ++A E+F+ +K S + + Y+ ++ + G+V++ + V +
Sbjct: 280 NHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFK 339
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
E++ ++P+I++Y++ I +D+ + +EM +SG D Y L++
Sbjct: 340 EMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK-NSGILPDVYSYSILID 393
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 86/218 (39%), Gaps = 20/218 (9%)
Query: 36 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 95
G W L + + + N N +N ++ G +++ + V +E+K ++PD++
Sbjct: 262 GVAW-----RLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316
Query: 96 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 155
+Y++ I +DQ + EM +SG + Y L++ + V+
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMR-NSGILPNIYSYSILIDGFCKEGR-VDKALEVFE 374
Query: 156 EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL--- 212
E + S +Y LI + G+ D + W+ + ++ NY ++ Y
Sbjct: 375 EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSK 434
Query: 213 -MLGHLKE--VGEIIDQWKQSATSDFDISACNRLLGAF 247
LKE + + + W D ACN +L +
Sbjct: 435 QFANALKEFRIMQKLGMWP-------DTIACNHILSIY 465
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 112/288 (38%), Gaps = 40/288 (13%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
K++ + L+ ++A E A +F R K + N + N ++ + +V+ V L+
Sbjct: 134 KSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLL 193
Query: 82 VEEIKRKNVVPDIFTY----NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY---- 133
E + + P+I TY N + +++I + + L ++ SG + + V Y
Sbjct: 194 FEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYM-SGETPNVVTYGTYI 252
Query: 134 --VNLVNIYITA---------------SHLVNA-------------ESSTLVEAEKSITQ 163
+ V ++ A +H NA S E + S
Sbjct: 253 KGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGIL 312
Query: 164 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
+Y LI + G D+ +++K +R + +Y ++ + G + + E+
Sbjct: 313 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 372
Query: 224 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
++ K S D+ + + L+ F G + A +F + N +P+
Sbjct: 373 FEEMKNSGILP-DVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPS 419
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTE--KAEELFERVKQSNLSFNALMYNE 64
I ER F + ++ YT + + A + + +A ++F + N++ +N
Sbjct: 262 IPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNN 321
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ +++ G+ EKV V ++KR PD TYN I S N+D+ K L+ M
Sbjct: 322 LLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSM-VKK 380
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
G S + + L I VN + ++ + +TY+ L+ ++ + D
Sbjct: 381 GCSPNASTFNGLFG-SIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDM 439
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGH 216
+ ++ K + + Y +++ Y +GH
Sbjct: 440 VLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGH 471
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 49/281 (17%), Positives = 107/281 (38%), Gaps = 14/281 (4%)
Query: 3 KVFGIHSGERYFEGL---------PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQS 53
K + G +F+ L P E Y ++ L + + ++ + +K
Sbjct: 112 KCAAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKAR 171
Query: 54 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 113
N+ + ++ ++ Y+ G + ++ N PD +++ IS +
Sbjct: 172 NVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEA 231
Query: 114 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
+ F D + D + Y NLV + A ++ AE E + + TY +I
Sbjct: 232 QSFFDSLK--DKFEPDVIVYTNLVRGWCRAGNIPEAE-RVFTEMKVAGCMPNVYTYTIVI 288
Query: 174 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
G + ++ + + S + +L ++ G ++V ++ +Q K+
Sbjct: 289 DALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCP 348
Query: 234 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
D N L+ + G ++A + +++K C+P NAS
Sbjct: 349 P-DTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSP-NAS 387
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 7/254 (2%)
Query: 9 SGERYFEGLPLS---AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
S R+F+ + LS A TY L+ G ++A + ++ + N + YN +
Sbjct: 173 SARRFFDSM-LSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTL 231
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
+ + G+V+ +V ++ + P++ T+N ++ ++ +K DEM G
Sbjct: 232 VAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM-VREG 290
Query: 126 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
+ D V Y LV Y A + S E + +T+ LI + GN ++
Sbjct: 291 LAPDGVSYNTLVGGYCKAG-CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERA 349
Query: 186 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLG 245
+ + +R +M + ++ + G L + + KQ + N L+
Sbjct: 350 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP-SVVCYNALIN 408
Query: 246 AFSDVGLTEKANEF 259
+ VG ++A E
Sbjct: 409 GYCMVGRMDEAREL 422
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+L+H+ A E+A L ++++ L N + + ++ + G ++ L V +
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + P + YN I+ +D+ ++ L EM G D V Y +++ Y
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA-KGLKPDVVTYSTIISAYCK--- 447
Query: 146 LVNAESSTLVEAEKSITQR----QWITYDFLIILYAG 178
N ++ + E + + ++ ITY LI + G
Sbjct: 448 --NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCG 482
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 119/303 (39%), Gaps = 61/303 (20%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+TAL+ + + + A +KQ + + + YN ++ Y VG++++ ++ E+
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKF-LDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K + PD+ TY+ IS A N D F L++ + G D + Y +L+ +
Sbjct: 427 EAKGLKPDVVTYSTIIS--AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEK 484
Query: 145 HLVNAES-----------------STLVEAE-----------------KSITQRQWITYD 170
L +A ++L++ K+ +TY
Sbjct: 485 RLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYS 544
Query: 171 FLI--------------ILYAGLGNKDKI--DQIWKSLRMTKQKMTSRNYICILSSYLML 214
LI +L+ L ++D I + + +L +K ++ + +L + M
Sbjct: 545 VLINGLSKSARAMEAQQLLFK-LYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMK 603
Query: 215 GHLKEVGEIIDQWKQSATS---DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
G + E D+ QS + D S + L+ G KA FH +LQ AP
Sbjct: 604 GLMNEA----DKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPN 659
Query: 272 NAS 274
+ S
Sbjct: 660 STS 662
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL+ Y A ++A LF ++++ L+ L YN ++ Y +G +E+ + EE+
Sbjct: 374 TYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 433
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +PD++TY + + ++ ++F DEM G D Y + IT
Sbjct: 434 VEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEM-LSKGLRPDCFAYNTRICAEITLGD 492
Query: 146 LVNA---ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ + ++E S T +TY+ LI GN +++ + +
Sbjct: 493 ISKSFQLREVIMLEGISSDT----VTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCI 548
Query: 203 NYICILSSYLMLGHLKE 219
Y C++ ++ G L+E
Sbjct: 549 TYTCLIHAHCERGFLRE 565
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 105/254 (41%), Gaps = 11/254 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY A++H + E A+ F ++ L + + YN ++ Y G ++ L+
Sbjct: 335 PTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLL 394
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+++R + P + TYN+ I ++++ ++ +EM + G D Y I +
Sbjct: 395 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM-VEQGCLPDVYTY----TILM 449
Query: 142 TASHLVNAESSTLVEAEKSIT---QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
SH V + + T ++ ++ + Y+ I LG+ K Q+ + + +
Sbjct: 450 KGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGIS 509
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKAN 257
+ Y ++ G+LK+ E++ Q D C L+ A + G +A
Sbjct: 510 SDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTC--LIHAHCERGFLREAR 567
Query: 258 EFHMLLLQKNCAPT 271
+F ++ P+
Sbjct: 568 KFFNDMISDGLPPS 581
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
++ YN ++T ++ G V+KV + E++ + ++P + TYN I + I+ +
Sbjct: 301 SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKF 360
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV--EAEKSITQRQWITYDFLIIL 175
EM G D + Y +L+N Y A N + + L+ + ++ +TY+ LI
Sbjct: 361 VEMRA-MGLLPDVITYNSLLNGYCKAG---NQKEALLLFGDLRRAGLAPTVLTYNILIDG 416
Query: 176 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
Y LG+ ++ R K++M + + + +Y +L
Sbjct: 417 YCRLGDLEEA-------RRLKEEMVEQGCLPDVYTYTIL 448
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TYT+L++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++
Sbjct: 248 TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 307
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+++K + PD TYN + +D+ +K +DEM+ G D V Y L++ Y
Sbjct: 308 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-KRGIQPDLVTYNTLISGY 364
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 5/246 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+
Sbjct: 147 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 206
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K + PD+FTYN+ I+ N+ + + + MS G V Y +L IY +
Sbjct: 207 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTSL--IYALSKKG 263
Query: 147 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y
Sbjct: 264 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 323
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +LG + E ++ID+ + D+ N L+ +S G + A ++
Sbjct: 324 TLMRGLCLLGRVDEARKLIDEMTKRGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMN 382
Query: 266 KNCAPT 271
K PT
Sbjct: 383 KGFNPT 388
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + +KA E+FE + + + + Y ++ GQV++ + +E
Sbjct: 216 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 275
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ + PD+ YN I+S + + NID+ + + EM DD V Y L+
Sbjct: 276 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD-VTYNTLMRGLCLLGR 334
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V+ + E K Q +TY+ LI Y+ G+ + +LR+ + +M ++ +
Sbjct: 335 -VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD------VKDALRI-RNEMMNKGFN 386
Query: 206 CILSSY 211
L +Y
Sbjct: 387 PTLLTY 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 37 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 89
Query: 77 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 120
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 90 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 149
Query: 121 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 160
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 150 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 209
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 210 LAP-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 268
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 269 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 321
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 15/237 (6%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
E YT + K +A++L +++++ + L+ +++ +N ++ + + GQ+E+ VV+
Sbjct: 52 ECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQ 111
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIY 140
E+++KN P TYN I +Q ++ + + + +S S+D ++ V N+
Sbjct: 112 EMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLR 171
Query: 141 ITASHLVNA--ESSTLVEAEKSIT-------QRQWITYDFLIILYAGLGNKDKIDQIWKS 191
T + L+NA L EA + + Q +TY+ L YA G +++ +
Sbjct: 172 -TMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIAD 230
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 248
++ + K R Y ++S Y G + +++ + K D+ A N LL +S
Sbjct: 231 MKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHP-DVVAFNTLLKGYS 286
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 15 EGL-PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
+GL P++ T LL+ + E+A + +K + + +A+ YN + Y + G
Sbjct: 160 DGLEPVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAG 219
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
+V ++ ++ ++K + P++ TY + IS
Sbjct: 220 RVAELEDLIADMKNARLKPNLRTYAILIS 248
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 23/211 (10%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ A E+A ELF+ + L+ NA+ Y ++ Y G + K + +E+
Sbjct: 693 TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752
Query: 86 KRKNVVPDIFTYNLWISSC--------AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
K V PD F Y+ I C A +L ++ V+K S + D + K ++
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVI 812
Query: 138 NIYITASHLVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
E++ L+E +K + + +TY LI + G + +Q + ++
Sbjct: 813 ------------EANQLLEDMVDKHV-KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKR 859
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
+ Y +LS Y M G E+ + D+
Sbjct: 860 NLMPNALTYTALLSGYNMAGRRSEMFALFDE 890
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 3/230 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
E A +FE + + NA++Y ++ ++ G+ ++ +++ + +K V PD+ YN
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
I + +++ K +L EM + G + Y L++ Y + + A+ E
Sbjct: 523 IIGLCKSRKMEEAKDYLVEM-IERGLKPNVYTYGALIHGYCKSGEMQVAD-RYFKEMLGC 580
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ LI Y G+ + I++ + R Y ++ L G L+
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
E++ ++ + D+ N ++ F G KA + H + QK +P
Sbjct: 641 MELLSEFLEKGLVP-DVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISP 689
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L++ + A ++ + L +++ S + + YN ++ G+V++ + + +
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K +V D+FTY++ I + K L+EM G V Y L++ ++
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMF-SKGLKPGHVAYTALIDGFMR--- 353
Query: 146 LVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+S ++ + R TY+ L+ G+ +K D + + M K +
Sbjct: 354 --QGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDT 411
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQS 230
+ Y ++ YL + V +++ + K+S
Sbjct: 412 QTYNNMIEGYLKEQNTSRVKDLLSEMKKS 440
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 10/268 (3%)
Query: 11 ERYFE---GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 67
+RYF+ G + A TAL+ Y T +A +F + ++ + Y+ ++
Sbjct: 571 DRYFKEMLGCGI-APNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIH 629
Query: 68 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 127
+ G+++ ++ E K +VPD+FTYN IS I + + L E C G S
Sbjct: 630 GLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQ-LHEYMCQKGIS 688
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
+ + Y L+N A + A K + +TY +I Y GN K +
Sbjct: 689 PNIITYNALINGLCKAGEIERARELFDGIPGKGLAH-NAVTYATIIDGYCKSGNLSKAFR 747
Query: 188 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-DISACNRLLGA 246
++ + + S Y ++ G+ ++ + + +S F S+ N L+
Sbjct: 748 LFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKA---LSLFLESVQKGFASTSSLNALMDG 804
Query: 247 FSDVGLTEKANEFHMLLLQKNCAPTNAS 274
F G +AN+ ++ K+ P + +
Sbjct: 805 FCKSGKVIEANQLLEDMVDKHVKPDHVT 832
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + + ++AE+ F +++ NL NAL Y +++ Y G+ ++ + +E+
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM 891
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVK--KFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
K++ PD T+++ I A D VK K +D+M G V +V L++
Sbjct: 892 IAKDIEPDGVTWSVMID--AHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHV-LIDPLCRK 948
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
H V+ L + E+ T L+ + G D ++ KS+
Sbjct: 949 EH-VSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSM 996
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ EKA+ L + + + YN M+ Y+ +V ++ E+
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ N+VP +T + I+ +I+ + E+ G + V Y L+ ++
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVF-EIMVSLGVKPNAVIYTTLIKGHVQEGR 496
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
A V +K + Q + Y+ +II GL K+++ L ++ N
Sbjct: 497 FQEAVRILKVMDKKGV-QPDVLCYNSVII---GLCKSRKMEEAKDYLVEMIERGLKPNVY 552
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ Y G ++ + + D+ C L+ + G T +A
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV-VCTALIDGYCKEGSTTEATSIFRC 611
Query: 263 LLQKNCAP 270
+L ++ P
Sbjct: 612 MLGRSVHP 619
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 99/250 (39%), Gaps = 7/250 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+H Y + + A+ F+ + ++ N ++ ++ Y G + + +
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++V PD+ TY+ I + + L E + G D Y ++++ +
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF-LEKGLVPDVFTYNSIISGFCKQGG 671
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A +K I+ ITY+ LI G ++ +++ + + Y
Sbjct: 672 IGKAFQLHEYMCQKGISP-NIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYA 730
Query: 206 CILSSYLMLGHLKEVGEIIDQW--KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
I+ Y G+L + + D+ K F SA L+ G TEKA +
Sbjct: 731 TIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA---LIDGCRKEGNTEKALSLFLES 787
Query: 264 LQKNCAPTNA 273
+QK A T++
Sbjct: 788 VQKGFASTSS 797
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+L++ + ++ ++LF+ + + + ++YN ++ + + G +++ ++ E+
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++K + PD TYN + +D+ +K +DEM+ G D V Y L++ Y
Sbjct: 424 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT-KRGIQPDLVTYNTLISGY 477
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + +KA E+FE + + + + Y ++ GQV++ + +E
Sbjct: 329 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 388
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ + PD+ YN I+S + + NID+ + + EM DD V Y L+
Sbjct: 389 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD-VTYNTLMRGLCLLGR 447
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V+ + E K Q +TY+ LI Y+ G+ + +LR+ + +M ++ +
Sbjct: 448 -VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD------VKDALRI-RNEMMNKGFN 499
Query: 206 CILSSY 211
L +Y
Sbjct: 500 PTLLTY 505
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 5/246 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y AL+ Y + A +R+ + ++ YN ++ G+ + +VEE+
Sbjct: 260 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 319
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K + D+FTYN+ I+ N+ + + + MS G V Y +L IY +
Sbjct: 320 GKGLALDVFTYNILINGHCKEGNVKKALEIFENMS-RRGVRATVVTYTSL--IYALSKKG 376
Query: 147 VNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
E+ L EA + + + Y+ LI ++ GN D+ +I + + Y
Sbjct: 377 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 436
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +LG + E ++ID+ + D+ N L+ +S G + A ++
Sbjct: 437 TLMRGLCLLGRVDEARKLIDEMTKRGIQP-DLVTYNTLISGYSMKGDVKDALRIRNEMMN 495
Query: 266 KNCAPT 271
K PT
Sbjct: 496 KGFNPT 501
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
LPL + T+ +L A +A EL ++ + N A+ YN ++ + S G+V+
Sbjct: 150 LPLC---TTTFNIMLRHLCSAGKPARALELLRQMPRPN----AVTYNTVIAGFCSRGRVQ 202
Query: 77 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 120
++ E++ R + P+ +TY IS +D+ K DEM
Sbjct: 203 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 262
Query: 121 ----SCDSGGSDDWVKYVN------LVNIYITASHLVNA--------ESSTLVE--AEKS 160
CD G D + Y + + T + LV+A E+ LVE K
Sbjct: 263 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 322
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ TY+ LI + GN K +I++++ + T Y ++ + G ++E
Sbjct: 323 LAL-DVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++ D+ + D+ N L+ + S G ++A E + +K AP + +
Sbjct: 382 DKLFDEAVRRGIRP-DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 434
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 2/207 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+ ++H + + ++AEEL +++ + Y+ MM Y + +K +V E +K
Sbjct: 385 YSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK 444
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
P I +Y I+ + + EM SG + Y L++ +I
Sbjct: 445 ECCFTPSIISYGCLINLYVKIGKVAKAIAISKEME-SSGIKHNNKTYSMLISGFIHLHDF 503
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
NA E KS Q Y+ LI + +GN D+ +I + ++ + + ++R +
Sbjct: 504 TNA-FRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 562
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATS 233
I+ + + G +K +I+D ++S +
Sbjct: 563 IIEGFAVAGDMKRALDILDLMRRSGCA 589
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA KA E F ++K+ L + +Y ++ G+++ V E+
Sbjct: 629 TYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREM 688
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + F YN+ I A ++ + + +M D G + Y + +N A
Sbjct: 689 SSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED-GVPPNIHTYTSYINACCKAGD 747
Query: 146 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A+ T+++ + + + TY LI +A D+ + ++ +++ K Y
Sbjct: 748 MQRAQ--TVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAY 805
Query: 205 ICILSSYL 212
C+++S L
Sbjct: 806 HCLVTSLL 813
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 111/293 (37%), Gaps = 38/293 (12%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 269 FERIPKPSR--REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 326
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+ EE+K + + I TY++ IS + E + G + + Y
Sbjct: 327 DMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGII-Y 385
Query: 134 VNLVNIYITASHLVNAE-----------------------SSTLVEAEKS---ITQR--- 164
N+++ + + ++ AE T+++ EK + +R
Sbjct: 386 SNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKE 445
Query: 165 -----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
I+Y LI LY +G K I K + + K ++ Y ++S ++ L
Sbjct: 446 CCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTN 505
Query: 220 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
I ++ +S D + N L+ AF +G ++A + ++ P+N
Sbjct: 506 AFRIFEEMLKSGLQP-DRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSN 557
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ + ++ +A A ++A ++ + +++S + + YN ++ + QVE+ V+
Sbjct: 556 SNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVL 615
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
++ + P+ TY + + AAT +I + ++ ++ + G D Y L+
Sbjct: 616 NKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIK-EGGLKLDVYIYETLLRACCK 674
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ + +A + T + + I + ++ Y+ LI +A G+ +W++ + KQ
Sbjct: 675 SGRMQSALAVTREMSSQKIARNTFV-YNILIDGWARRGD------VWEAADLMKQ 722
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 6/252 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TYT ++ A T+ A +L + ++ S N YN ++ ++++ ++
Sbjct: 79 TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 138
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
EE+ + PD+ TYN +I +D+ +KFL M + D V Y ++N
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV----TPDVVSYTTVINGLCK 194
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ L ++ S L + +TY LI + G ++ + S+ +
Sbjct: 195 SGDL-DSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 253
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y +L + LGH+ + +++ + ++ + D+ + N + +KA
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTP-DVVSYNACIDGLCKAERVKKAKAVFDR 312
Query: 263 LLQKNCAPTNAS 274
++++ C P +S
Sbjct: 313 MVERGCTPNASS 324
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 16/250 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL + EKA +L R+K+ + +YN +++ Y + + E+
Sbjct: 12 TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71
Query: 86 KRKNVVPDIFTY-NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + +P + TY N+ C A D V K LDEM D G S + Y N+ +
Sbjct: 72 VKNHCLPTVVTYTNIVDGLCKAGRTKDAV-KLLDEMR-DKGCSPNIYTY----NVIVEGL 125
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILY----AGLGNKDKIDQIWKSLRMTKQKMT 200
E L EA+K + + Y ++ Y GL D++D+ K L
Sbjct: 126 ----CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPD 181
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+Y +++ G L ++DQ + D+ + L+ F G E+A
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTP-DVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 261 MLLLQKNCAP 270
+L+ C P
Sbjct: 241 DSMLKLGCRP 250
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 16/253 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y AL+ Y+ AK +A + + +++ + Y ++ G+ + +++E++
Sbjct: 48 YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMR 107
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K P+I+TYN+ + +D+ KK L+EM+ G D V Y + +
Sbjct: 108 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV-RGYFPDVVTYNSFIKGLCKCDR- 165
Query: 147 VNAESSTLVEAEKSITQRQWITYDFL--IILYAGLGNKDKIDQIWKSL-RMTKQKMTSR- 202
V+ + R +T D + + GL +D + L +MT + T
Sbjct: 166 --------VDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDV 217
Query: 203 -NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y ++ + G ++ ++D + ++ A N LLGA +G KA + +
Sbjct: 218 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP-NMVAYNSLLGALHRLGHIGKAEDMLV 276
Query: 262 LLLQKNCAPTNAS 274
+ ++ P S
Sbjct: 277 EMERRGFTPDVVS 289
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 38/249 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ AL++ + K ++A +LF+ + + +L NA+ +N M+ + G +E+ + +
Sbjct: 345 TFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM 404
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P++ TYN I+ N+ KK L+EM
Sbjct: 405 LDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM------------------------- 439
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
E + +TY+ LI + G K +++ + K Y
Sbjct: 440 ------------ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYN 487
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ Y M G+LK ++ Q ++ ++ N L+ F G E AN +L+
Sbjct: 488 TLMDGYCMEGNLKAALKVRTQMEKEGKRA-NVVTYNVLIKGFCKTGKLEDANRLLNEMLE 546
Query: 266 KNCAPTNAS 274
K P +
Sbjct: 547 KGLNPNRTT 555
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 101/233 (43%), Gaps = 16/233 (6%)
Query: 44 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
+E+ +R Q NL+ +N + G++ K V+E+IK P+I TYN I
Sbjct: 189 KEMIKRRIQPNLT----TFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG 244
Query: 104 -C--AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
C + + + L EM + ++ + + L++ + +++ A+++ E ++
Sbjct: 245 HCKKGSAGKMYRADAILKEMLANKICPNE-ITFNTLIDGFCKDENVLAAKNA-FEEMQRQ 302
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
+ +TY+ LI GL N K+D+ +W + K + +++ + +
Sbjct: 303 GLKPNIVTYNSLI---NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMI 359
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
KE ++ D + I+ N ++ AF G+ E+ H +L + P
Sbjct: 360 KEARKLFDDIAEQDLVPNAITF-NTMIDAFCKAGMMEEGFALHNSMLDEGIFP 411
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 4/247 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+SE Y+A + Y +AE+ F K+S + L +N M+ Y + EK ++
Sbjct: 479 SSECYSANIDAYGERGHILEAEKAFLCCKESR-KLSVLEFNVMIKAYGISNRYEKACQLI 537
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ ++ V+PD F+YN I A+ + K +L +M ++ D + Y +++ +I
Sbjct: 538 DSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ-ETQLVSDCIPYCAVISSFIK 596
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
L AE E Q + Y LI +A +GN + +LR M +
Sbjct: 597 LGQLEMAE-GLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAV 655
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ Y +G+L+E E + S D+ + N ++ +S+ + ++A E
Sbjct: 656 IYNSLIKLYTKVGYLEEAQEAYKMLQASEVGP-DVYSSNCMIDLYSERSMVKQAEEIFES 714
Query: 263 LLQKNCA 269
L +K A
Sbjct: 715 LKRKGDA 721
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y +L+ + A A KA+ +++++ L + + Y +++ ++ +GQ+E + +E+
Sbjct: 551 SYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEM 610
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
NV PD+ Y + I++ A N+ + +++ + ++G + V Y +L+ +Y +
Sbjct: 611 IGYNVQPDVVVYGILINAFADVGNVREAVNYVNALR-NAGLPMNAVIYNSLIKLYTKVGY 669
Query: 146 LVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A E+ +++A S + + +I LY+ + ++I++SL+ K ++
Sbjct: 670 LEEAQEAYKMLQA--SEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLK-RKGDANEFSF 726
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 248
+L Y +G LKE +I+ + ++ D+ + N +LG ++
Sbjct: 727 AMMLCMYKRIGKLKEAFQIVQKMRELGLVT-DLLSYNNVLGFYA 769
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P +S TY L+ Y A +A + F + + + N + +N M+ + + GQ+E+
Sbjct: 300 PHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEE 359
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
A ++++++ PD TYN+ IS A NID+ + +M ++ D V Y L+
Sbjct: 360 AASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMK-EARLEPDLVSYRTLL 418
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ + HLV + E ++ + T L +Y G K +W +
Sbjct: 419 YAF-SIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKK-SWLWFRRFHLEG 476
Query: 198 KMTSRNYICILSSYLMLGHLKEV 220
M+S Y + +Y GH+ E
Sbjct: 477 NMSSECYSANIDAYGERGHILEA 499
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 52/229 (22%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-----ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
T ++ Y A +KAE+ F E Q ++ ++ YN ++ Y GQ+ + +
Sbjct: 268 TMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLREASD 327
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ R+ ++P+ T+N I C +++ + +M
Sbjct: 328 TFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKM-------------------- 367
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
E+ TY+ LI L+A N D+ +K ++ + +
Sbjct: 368 -----------------EELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPD 410
Query: 201 SRNYICILSSY----------LMLGHLKEVGEIIDQWKQSATSDFDISA 239
+Y +L ++ +++ + E G ID++ QSA + I A
Sbjct: 411 LVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEA 459
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 118/269 (43%), Gaps = 17/269 (6%)
Query: 10 GERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 67
ER F+ +P + +++AL+ L + ++A + F +K + L+ + ++Y ++
Sbjct: 482 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 541
Query: 68 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 127
+ G + + V +E+ + D+ TYN ++ + + + EM+ + G
Sbjct: 542 GFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT-ERGVF 600
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKD 183
D+ + L+N Y ++ A TL E + QR +TY+ LI + +
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKA--VTLFEM---MIQRNLKPDVVTYNTLIDGFCKGSEME 655
Query: 184 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISACN 241
K++++W + + +Y +++ Y +G + E + W + F+ I CN
Sbjct: 656 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL---WDEMVEKGFEATIITCN 712
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++ + G KA+EF +L K P
Sbjct: 713 TIVKGYCRAGNAVKADEFLSNMLLKGIVP 741
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ Y E+A EL + + L YN ++ G+ + V++E+
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
+ + PD TYN+ + C N+ ++ DEM G D V + L+ +
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP-SQGVVPDLVSFSALIGL 507
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 104/249 (41%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ K +A+ELF + + + + + ++ Y G + K + E +
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++N+ PD+ TYN I +++V + ++M + + Y L+N Y
Sbjct: 630 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM-ISRRIYPNHISYGILINGYCNMGC 688
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A EK + IT + ++ Y GN K D+ ++ + Y
Sbjct: 689 VSEAFRLWDEMVEKGF-EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 747
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+++ ++ ++ ++++ + S D+ N +L FS G ++A + +++
Sbjct: 748 TLINGFIKEENMDRAFALVNKMENSGLLP-DVITYNVILNGFSRQGRMQEAELIMLKMIE 806
Query: 266 KNCAPTNAS 274
+ P ++
Sbjct: 807 RGVNPDRST 815
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ L+ Y A+ + E F +K L + N ++ + VG V+ + +E+
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
R V +++T N+ I++ I+ K FL +M + G D V Y L+N Y
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME-EKGVFPDVVTYNTLINAY 403
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
+LL W + A E+++ V +S + N N M+ ++E + +++ K
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 387
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
V PD+ TYN I++ +++ + +D MS
Sbjct: 388 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 420
>gi|125563762|gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
Length = 962
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P+S E Y +L Y A E+ + ++++++ F+ YN M+ +Y G +
Sbjct: 816 GFPVSL---EAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWI 872
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
E VA V+ E+K + PD+++YN I + + K + EM G + D V Y N
Sbjct: 873 EGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRI-KGIAADRVTYTN 931
Query: 136 LV 137
L+
Sbjct: 932 LI 933
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 12 RYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
R + +P SA Y +++ +++ + AE L+ +K S+ + + Y+ ++ +Y
Sbjct: 597 RIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMY 656
Query: 70 MSVGQVEKVALVVEEI-KRKNVVPDIF--------------------------------- 95
G+ E LV+E++ K+K +VPD +
Sbjct: 657 TKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELD 716
Query: 96 --TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 153
YN I+ C + +D++ + DEM G + V L++IY A AE
Sbjct: 717 EAMYNCIINCCGRAIPVDELSRIFDEM-IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVF 775
Query: 154 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 213
L+ ++ + I+Y+ +I +A G+ + + ++ ++ Y C+L +Y
Sbjct: 776 LMARKQGMA--DIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGK 833
Query: 214 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
G L+E ++ Q + A +FD N ++ + G E
Sbjct: 834 AGQLEEFAAVL-QKMERAGCEFDHYTYNIMINIYGRKGWIE 873
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 46 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 105
+R++++ + YN M+ Y GQ+E+ A V+++++R D +TYN+ I+
Sbjct: 808 FVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYG 867
Query: 106 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
I+ V L E+ GG D Y L+ Y A
Sbjct: 868 RKGWIEGVANVLAELK-SRGGEPDLYSYNTLIKAYGIAG 905
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 100/234 (42%), Gaps = 8/234 (3%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E + L+ Y E+AE + + + ++ N + YN ++T Y V ++K V +
Sbjct: 368 ENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDR 427
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K + PD TY I Q + ++ +SG + + ++N+ A
Sbjct: 428 LKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLR-NSGFKPNASNFYTMINLL--AR 484
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
H + ++ ++E ++ + L+ Y +G K+ QI K+ K + +
Sbjct: 485 HDDSEGATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSC 544
Query: 205 ICILSSYLMLGHLKEVGEIIDQ--WKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+++ ++ ++E ++ + WK SDF+ + + L+ + + G + A
Sbjct: 545 SILVTGFVQNSLVEEAMRVLREKKWKD---SDFEDNLYHILICSCKEAGCCDDA 595
>gi|115479233|ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|50725891|dbj|BAD33419.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|50726131|dbj|BAD33652.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa Japonica Group]
gi|125605742|gb|EAZ44778.1| hypothetical protein OsJ_29409 [Oryza sativa Japonica Group]
Length = 962
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P+S E Y +L Y A E+ + ++++++ F+ YN M+ +Y G +
Sbjct: 816 GFPVSL---EAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWI 872
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
E VA V+ E+K + PD+++YN I + + K + EM G + D V Y N
Sbjct: 873 EGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRI-KGIAADRVTYTN 931
Query: 136 LV 137
L+
Sbjct: 932 LI 933
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 12 RYFEGLPLSAKTS--ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
R + +P SA Y +++ +++ + AE L+ +K S+ + + Y+ ++ +Y
Sbjct: 597 RIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMY 656
Query: 70 MSVGQVEKVALVVEEI-KRKNVVPDIF--------------------------------- 95
G+ E LV+E++ K+K +VPD +
Sbjct: 657 TKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELD 716
Query: 96 --TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 153
YN I+ C + +D++ + DEM G + V L++IY A AE
Sbjct: 717 EAMYNCIINCCGRAIPVDELSRIFDEM-IQQGHLANTVTLNVLLDIYGKAGLFNKAEKVF 775
Query: 154 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 213
L+ ++ + I+Y+ +I +A G+ + + ++ ++ Y C+L +Y
Sbjct: 776 LMARKQGMA--DIISYNTIIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGK 833
Query: 214 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
G L+E ++ Q + A +FD N ++ + G E
Sbjct: 834 AGQLEEFAAVL-QKMERAGCEFDHYTYNIMINIYGRKGWIE 873
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 46 LFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCA 105
+R++++ + YN M+ Y GQ+E+ A V+++++R D +TYN+ I+
Sbjct: 808 FVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYG 867
Query: 106 ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
I+ V L E+ GG D Y L+ Y A
Sbjct: 868 RKGWIEGVANVLAELK-SRGGEPDLYSYNTLIKAYGIAG 905
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 100/234 (42%), Gaps = 8/234 (3%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E + L+ Y E+AE + + + ++ N + YN ++T Y V ++K V +
Sbjct: 368 ENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAYNTVITGYGKVSDMQKAMEVFDR 427
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K + PD TY I Q + ++ +SG + + ++N+ A
Sbjct: 428 LKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLR-NSGFKPNASNFYTMINLL--AR 484
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
H + ++ ++E ++ + L+ Y +G K+ QI K+ K + +
Sbjct: 485 HDDSEGATEILEDMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYKKILFDATSC 544
Query: 205 ICILSSYLMLGHLKEVGEIIDQ--WKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+++ ++ ++E ++ + WK SDF+ + + L+ + + G + A
Sbjct: 545 SILVTGFVQNSLVEEAMRVLREKKWKD---SDFEDNLYHILICSCKEAGCCDDA 595
>gi|413953500|gb|AFW86149.1| hypothetical protein ZEAMMB73_846563 [Zea mays]
Length = 1039
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+++ +T+ ++ +Y +KA E+F ++ L + MY M++LY G+ ++ +L
Sbjct: 778 SQSMQTFNTMISVYGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASL 837
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + +K + P ++N I++ A + + K EM D G + D Y+ L+ Y
Sbjct: 838 MFKRMKEDGIRPGKISFNSMINAYATSGLFSEAKSVFQEMQ-DCGHAPDSFSYLALIRAY 896
Query: 141 ITASHLVNAESS 152
A AE +
Sbjct: 897 TEAKLYTEAEEA 908
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 12/185 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT LL LY + AEE F + Q +A+ ++ Y G+ E + L +
Sbjct: 175 AYTVLLRLYGRVGKVKLAEETFLEMLQVGCEPDAVACGTLLCAYARWGRHEDMMLFYSAV 234
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + +VP I YN ISS +V +M ++G + Y ++ +
Sbjct: 235 RGRGLVPPISVYNYMISSLQKQKLHGKVIHVWKQM-LEAGAPPNQFTYTVVIGSLVKEDL 293
Query: 146 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L A V+ + +R+++ TY LI + G ++ ++++ M Q +
Sbjct: 294 LEEA-----VDLFGEMRRRRFVPEEATYSLLISASSRHGKGEQALRLFEE--MKGQGIAP 346
Query: 202 RNYIC 206
NY C
Sbjct: 347 SNYTC 351
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 97/242 (40%), Gaps = 2/242 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ E+A +LF +++ Y+ +++ G+ E+ + EE+
Sbjct: 280 TYTVVIGSLVKEDLLEEAVDLFGEMRRRRFVPEEATYSLLISASSRHGKGEQALRLFEEM 339
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + + P +T ++ + + +M S D V Y L+ IY
Sbjct: 340 KGQGIAPSNYTCASLLALHCKNEDYPKALALFSDME-SSKVIPDEVIYGILIRIYGKLG- 397
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L T E EK+ TY + ++ G+ D+ ++ +S++ K + +Y
Sbjct: 398 LYEEARQTFGEIEKAGLLNDEQTYVAMAQVHLNAGDCDRALEVLESMKTRGVKPSRFSYS 457
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L ++ + + QS D CN +L + +G +KA +LL+
Sbjct: 458 ALLRCHVAKEDVVAAEDTFRALSQSQHGLPDAFCCNDMLRLYMRLGRLDKARALVSVLLR 517
Query: 266 KN 267
++
Sbjct: 518 ED 519
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 19 LSAKTSETYTA-LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
L K ++ A L+ Y AK E+A+ELF+ S AL+ N M+ + G+ E
Sbjct: 636 LGTKPDDSAVATLIVQYGQAKQLERAQELFDSASAS-FPDGALVCNAMVDAFCKCGRAED 694
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-----FLDEMSCDSGGSDDWVK 132
+ E+ + + T ++ ++ +V+ F DE+ D+ + ++K
Sbjct: 695 AYHLFMEMADQGSYRNAVTASILVTHLTKHGKFQEVENIMHGCFRDEVQLDTALYNTFIK 754
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ + + L +A S ++Q T++ +I +Y G DK +++ +
Sbjct: 755 SM------LESGKLHSAVSIYDRMVSSGVSQSMQ-TFNTMISVYGKGGKLDKAVEMFAAA 807
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
+ + + Y +LS Y G +E + + K+ IS N ++ A++ GL
Sbjct: 808 QELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISF-NSMINAYATSGL 866
Query: 253 TEKAN 257
+A
Sbjct: 867 FSEAK 871
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 9/229 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+ +A AK E+A +L E +++ N + YN ++ + V VV+++
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P++ T+N + N+D +K L M G + V Y L++ +
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSALIDGLCKSQK 177
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
+ A+ L E + S TY LI GL DKI++ + LR + +
Sbjct: 178 FLEAK-EVLEEMKASGVTPDAFTYSALI---HGLCKADKIEEAEQMLRRMAGSGCTPDVV 233
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
Y I+ ++ G L E + + + ++ S D+ N ++ +G
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP-DVVTYNTVIDGLCKLG 281
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+H A E+AE++ R+ S + + ++Y+ ++ + G++ + ++E+
Sbjct: 199 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 258
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ PD+ TYN I I + + LD+M D V Y ++N +
Sbjct: 259 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDM 318
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV A+ L K+ +TY +I G ++ + + + ++ Y
Sbjct: 319 LVEAQ-KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 377
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATS 233
++S + E ++++ + +
Sbjct: 378 TLISGLCKARKVDEAERVMEEMRNAGCP 405
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ E+AE L + +K++ + N + Y +++ +V++ V+EE+
Sbjct: 340 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 399
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG--SDDWVKYVNLVNIYITA 143
+ P++ TYN ++ + I + ++ + M D S D Y +VN +++
Sbjct: 400 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK-DGRAECSPDAATYRTIVNALMSS 458
Query: 144 SHLVNAE 150
+ AE
Sbjct: 459 DLVQEAE 465
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 93/230 (40%), Gaps = 10/230 (4%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A EL E +K + + +A + ++T + G ++ ++ ++ P++ TY I+
Sbjct: 9 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIA 65
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
+ A +++ K L+EM + G + V Y LV+ S +V A + + +
Sbjct: 66 AFARAKKLEEAMKLLEEMR-ERGCPPNLVTYNVLVDALCKLS-MVGAAQDVVKKMIEGGF 123
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
+T++ L+ + GN D ++ + + Y ++ E E
Sbjct: 124 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 183
Query: 223 IIDQWKQSA-TSD-FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++++ K S T D F SA L+ E+A + + C P
Sbjct: 184 VLEEMKASGVTPDAFTYSA---LIHGLCKADKIEEAEQMLRRMAGSGCTP 230
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ A+ ++AE +F+++ + N YN ++ Y+S+G+ ++V ++EE+
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PD +TY ++ + + F D M G Y L++ Y T
Sbjct: 296 SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSM-IRKGIKPKVSTYGILIHGYATKGA 354
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L S + E ++ I ++ YA G DK I+ +R NY
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHI-FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ + LG + + +Q + +I N L+ V E+A E +L
Sbjct: 414 ALIDALCKLGRVDDAEVKFNQMINEGVTP-NIVVFNSLVYGLCTVDKWERAEELVYEMLD 472
Query: 266 KNCAP 270
+ P
Sbjct: 473 QGICP 477
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 38 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 97
KW E+AEEL + + NA+ +N ++ +VG+V + +++ ++ V PD F+Y
Sbjct: 459 KW-ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSY 517
Query: 98 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
IS T D+ +K D M G S V Y L++ Y +AS + +A
Sbjct: 518 TPLISGYCLTGRTDEAEKVFDGM-VSIGLSPTEVTYNTLLHGYCSASRIDDA 568
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT L+ Y T++AE++F+ + LS + YN ++ Y S +++ + E+
Sbjct: 516 SYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREM 575
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
RK V P + TYN + T + K+ M +SG D Y ++N
Sbjct: 576 LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM-INSGTKCDIYTYNIILN 627
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 8/249 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN---LSFNALMYNEMMTLYMSVGQVEKVALVV 82
+YT LL K E+A EL + + N + Y+ ++ + + GQV+K +
Sbjct: 163 SYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLF 222
Query: 83 EEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
E+ + + PD+ TY I C A L D+ + +M D+G + Y L++ Y+
Sbjct: 223 LEMIDRGIPPDVVTYTTVIDGLCKAQL-FDRAEGVFQQM-IDNGFKPNNYTYNCLIHGYL 280
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ L E + TY L+ G + + S+ K
Sbjct: 281 SIGKWKEV-VQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKV 339
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y ++ Y G L E+ +D ++ S D N A++ G+ +KA +
Sbjct: 340 STYGILIHGYATKGALSEMHSFLDLMVENGLSP-DHHIFNIFFSAYAKCGMIDKAMDIFN 398
Query: 262 LLLQKNCAP 270
+ Q +P
Sbjct: 399 KMRQHGLSP 407
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 110/236 (46%), Gaps = 37/236 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-----ERVKQSNLSFNALM------------------- 61
T+T L+H Y EKA +LF +R++ +++N+L+
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Query: 62 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
Y+ ++ + GQVE+ ++E+ K +P+I TYN I + N+
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
+ ++FL +M D+ D + + L++ YI ++ A + + EK + Q +TY+
Sbjct: 524 KKGQQFLQKMMQDN-ILPDLITFNTLIHGYIKEENMHGAFNVFNI-MEKEMVQPDAVTYN 581
Query: 171 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
+I ++ GN ++ +++K + + + Y+ +++ ++ G+ KE ++ D+
Sbjct: 582 MIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDE 637
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A ++ L+ + E+A + ++ ++Q ++ + + ++ ++ L+ + G+++ A
Sbjct: 259 APDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAA 318
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ E+K +VPD Y + I ++ + + DEM G D V Y L+N
Sbjct: 319 YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM-VGLGCLPDVVTYNTLLNGL 377
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L++AE E+ +T T+ LI Y GN +K Q++ +L + +
Sbjct: 378 CKQHRLLDAEELLNEMKERGVTP-DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436
Query: 201 SRNYICILSSYLMLGHLKEVGEIID 225
Y ++ G L + E+ D
Sbjct: 437 VVAYNSLIDGMCRKGDLAKANELWD 461
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/247 (17%), Positives = 100/247 (40%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+++ L+ L++ + A +K L + ++Y ++ + G + + V +E+
Sbjct: 299 SFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+PD+ TYN ++ + ++ L+EM + G + D + L++ Y +
Sbjct: 359 VGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK-ERGVTPDLCTFTTLIHGYCRDGN 417
Query: 146 LVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
A TL+ + + Y+ LI G+ K +++W + +
Sbjct: 418 FEKALQLFDTLLHQR---LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y ++ S+ G ++E +D+ +I N ++ + G +K +F +
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLP-NIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 264 LQKNCAP 270
+Q N P
Sbjct: 534 MQDNILP 540
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 37 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
A W AEE + V S+ NA N M+ Y + +K V+ E++++ V PD+ T
Sbjct: 135 AGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVT 194
Query: 97 YNLWISSCAATLNIDQVKKFLDEMS 121
+N+ I + ++D +D M+
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMA 219
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T A++ +Y + KA E+ + +K+ + + YN +M +Y E+ ++ EI
Sbjct: 351 TLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREI 410
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PDI +YN I + + + L EM +SG + D + Y + Y S
Sbjct: 411 LAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR-ESGPAPDIITYNTFIASYAADSM 469
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
V A + Q TY+ ++ Y L +D+ +LR
Sbjct: 470 FVEAIDVVCYMIKHGCKPNQS-TYNSIVDWYCKLNRRDEASMFVNNLR 516
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 26 TYTALLHLYAG-AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
T+ AL+ ++ K+TE + +FE +K S + + +N +++++ G +V+ V +E
Sbjct: 141 TFNALIKMHGNRGKFTEMMK-VFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKE 199
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+KR VP+ T+N ISS + + DQ M ++G + D Y N V +
Sbjct: 200 MKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRM-LEAGVNPDLSSY-NAVLAALARG 257
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
L L E + + +TY L+ YA
Sbjct: 258 GLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYA 290
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 26 TYTALLHLYAGAKWTEK----AEELF---------------------------ER----V 50
TY +LLH YA K E+ AEE++ ER +
Sbjct: 281 TYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLEL 340
Query: 51 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
+Q S + N M+++Y V K +++ +KR P + TYN + + + N
Sbjct: 341 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 400
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
++ ++ L E+ G D + Y ++ Y + +A S L E +S ITY+
Sbjct: 401 ERSEEILREILA-KGIRPDIISYNTVIYAYCRNGRMRDA-SRVLSEMRESGPAPDIITYN 458
Query: 171 FLIILYAG 178
I YA
Sbjct: 459 TFIASYAA 466
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT LL + A + A ++FE ++ N +N ++ ++ + G+ ++ V E+I
Sbjct: 106 TYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDI 165
Query: 86 KRKNVVPDIFTYNLWIS 102
K PDI T+N +S
Sbjct: 166 KTFQCSPDIVTWNTLLS 182
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++ +K E+A +LF+ ++Q ++ N +MY ++ Y G+V + L++E++
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM 558
Query: 86 KRKNVVPDIFTYNLWISS-CA--------------------ATLNIDQV----------- 113
KN +P+ T+N I C T++ D +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDF 618
Query: 114 ----KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++F +S SG D Y + Y L +AE E ++ TY
Sbjct: 619 DHAYRRFQQMLS--SGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSP-DLFTY 675
Query: 170 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 229
LI Y LG + + K + T + + ++ ++ L + + K G
Sbjct: 676 SSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVM 735
Query: 230 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
S +FDI LL + G+T A + L+L
Sbjct: 736 SNMMEFDIVV--ELLEKMVEHGVTPNAKSYEKLML 768
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 3/244 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y LL+ A ++ ++++ + + + N YN+M+ Y VG VE+ V I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ PD FTY I ++D K EM G + V Y +L++ +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPL-KGCRRNEVAYTHLIH-GLCVERR 303
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
++ V+ + TY LI G K + + K + K Y
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ S L++ E++ Q + ++ N L+ + G+ E A + L+ +
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMP-NVITYNALINGYCKRGMIEDALDVVELMESR 422
Query: 267 NCAP 270
N P
Sbjct: 423 NLRP 426
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 98/250 (39%), Gaps = 45/250 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ EKA EL ++ + L N + YN ++ Y G +E VVE +
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +N+ P+ TYN I N+ + L++M + D V Y +L++ + +
Sbjct: 420 ESRNLRPNTRTYNELIKG-YCKRNVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGN 477
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+A + ++ + W TY + ID + KS R
Sbjct: 478 FDSAYRLLSLMNDRGLVPDPW-TYTSM------------IDSLCKSKR------------ 512
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 263
++E ++ D +Q ++ L+ + G K NE H++L
Sbjct: 513 -----------VEEACDLFDSLEQKDVIP-NVVMYTALIDGYCKAG---KVNEAHLMLEK 557
Query: 264 -LQKNCAPTN 272
L KNC P +
Sbjct: 558 MLSKNCLPNS 567
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ ++ E+A +LF+ +K++N+ N Y+ +++ + G VE+ + EE+
Sbjct: 425 TYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEM 484
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ +VPD+F +N I +D+ + D M
Sbjct: 485 THERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRM 519
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 12/209 (5%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALMYNEMMTL 68
F LP T + + A++ +YA + + +L + ++ L SFN L+ +
Sbjct: 55 FPHLP--GATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSG 112
Query: 69 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
++ G + L E+++ + PD+ TYN IS+C+ N+D +EM D
Sbjct: 113 CLAPGSAFDLLL---EVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPD 169
Query: 129 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 188
W Y +V+++ +AE EK + +TY+ L+ +A G+ D ++++
Sbjct: 170 LWT-YNAMVSVHGRCGKAQDAERMFRELVEKGF-KPDAVTYNSLLYAFAKEGDADTVERV 227
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHL 217
+ L K Y ++ Y +G L
Sbjct: 228 CEELVRAGFKKDGITYNTMIHMYGKMGRL 256
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ ++ + AE +F + + +A+ YN ++ + G + V V EE+
Sbjct: 172 TYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEEL 231
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R D TYN I +D DEM G + D V Y L++
Sbjct: 232 VRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-LGCTPDAVTYTVLIDSLGKMDR 290
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A L E + + +T+ LI YA G +++ + + + + K Y+
Sbjct: 291 ISDA-GKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYL 349
Query: 206 CILSSYLMLGHLKEV 220
+L G ++++
Sbjct: 350 VMLDIIARSGDMRKL 364
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E+Y +LL AK E+AE+LFE ++ N +Y+ +M +Y K ++
Sbjct: 835 ESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLAS 894
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
+K + P I T ++ ++S + D+ +K L+ + S
Sbjct: 895 MKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSS 934
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
LL +Y G +K E++ + ++ L N YN ++ +Y + E+ ++ E+ +K
Sbjct: 770 LLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKG 829
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
+ P + +Y +++ +Q ++ +E+ G + Y L+ IY A + A
Sbjct: 830 LTPKLESYKSLLAASGKAKLWEQAEQLFEEIR-SKGYRLNRSLYHMLMKIYRDACNHSKA 888
Query: 150 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 209
E L ++ + T L+ Y G+ D+ +++ SL+ + ++++ Y + +
Sbjct: 889 E-QLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFN 947
Query: 210 SYLMLG 215
+YL G
Sbjct: 948 AYLKNG 953
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + + +A E+++ + + + Y+ +M + VE V ++ E+
Sbjct: 241 TYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 300
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V P++++Y + I D+ + L EM + G D + + L+ + A
Sbjct: 301 EAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEME-NEGCKPDVITHTVLIQVLCDAGR 359
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A+ + +KS + +TY L+ +A G + +IW +++ Y
Sbjct: 360 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYT 418
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + +G + E E+ D+ KQ
Sbjct: 419 AVIDALCQVGRVFEALEMFDEMKQKG 444
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 108/238 (45%), Gaps = 11/238 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + A ++A ++F + ++N + L+ N ++ G+ ++ + ++
Sbjct: 556 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQL 615
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 616 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 671
Query: 146 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 202
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 672 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 728
Query: 203 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+C IL S++ +G +KE II ++ S D S+C+ L+ TEK+ EF
Sbjct: 729 ATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEF 786
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 5/226 (2%)
Query: 50 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 109
+K++ + NA YN ++ + G + V + + VVP + TY++ + + +
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289
Query: 110 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++ V L EM G + Y + + A A L E E + IT+
Sbjct: 290 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQARRFDEA-YRILAEMENEGCKPDVITH 347
Query: 170 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 348 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMK 406
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+D ++ A ++ A VG +A E + QK P S
Sbjct: 407 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 451
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 8/198 (4%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TY LL A E AE LF + + N +YN ++ + G EKV
Sbjct: 936 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 995
Query: 81 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKF--LDEMSCDSGGSDDWVKYVNLV 137
+ +++ + + PDI +Y + I + C A D + F L EM G D + Y NL+
Sbjct: 996 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM----GLEPDLITY-NLL 1050
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ S + S E +K TY+ LI+ G + ++++ L
Sbjct: 1051 IDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGW 1110
Query: 198 KMTSRNYICILSSYLMLG 215
K Y ++ Y + G
Sbjct: 1111 KPNVFTYNALIRGYSVSG 1128
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL +A ++ E++ +K + N + Y ++ VG+V + + +E+
Sbjct: 381 TYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 440
Query: 86 KRKNVVPDIFTYNLWISS 103
K+K +VP+ ++YN IS
Sbjct: 441 KQKGIVPEQYSYNSLISG 458
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 32 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 91
HL K E A EL ++ K +S YN ++ + ++ + E+K
Sbjct: 808 HLCKQKKALE-AHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCG 866
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
PD FTYNL + + ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 867 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 923
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +K E+A LF +++ + N YN ++ G+ + + EE+
Sbjct: 1046 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1105
Query: 86 KRKNVVPDIFTYNLWISSCAATLNID 111
K P++FTYN I + + + D
Sbjct: 1106 LTKGWKPNVFTYNALIRGYSVSGSTD 1131
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 5/218 (2%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K H + F+ +S KT +Y +L+ + AE LF +K+ + Y
Sbjct: 814 KALEAHELVKKFKSFGVSLKTG-SYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTY 872
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ-VKKFLDEMS 121
N ++ ++E++ V EE+ RK TYN IS + ++Q + + + MS
Sbjct: 873 NLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 932
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
G S Y L++ + A + +AE + E + + Y+ L+ + GN
Sbjct: 933 --QGFSPTPCTYGPLLDGLLKAGRIEDAE-NLFNEMLEYGCKANCTIYNILLNGHRIAGN 989
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
+K+ +++ + ++Y I+ + G L +
Sbjct: 990 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 1027
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 33 LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVP 92
L + K TE A +L ++ + ++ + +MYN + T + Q+ + + E++K+ P
Sbjct: 413 LCSAGKMTE-AIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPP 471
Query: 93 DIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESS 152
DIFTYN+ ISS +D KF +E+ +S D + Y +L+N + + V+
Sbjct: 472 DIFTYNILISSFGRAGRVDIAVKFFEELE-NSDCKPDVISYNSLINC-LGKNGDVDEAHM 529
Query: 153 TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
E ++ +TY LI + G DK++ +
Sbjct: 530 RFKEMQEKGLNPDVVTYSTLIECF---GKTDKVEMACR 564
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+TAL L K +L+E++KQ + YN +++ + G+V+ EE++
Sbjct: 445 FTALGRL----KQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELE 500
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ PD+ +YN I+ ++D+ EM + G + D V Y L+ +
Sbjct: 501 NSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQ-EKGLNPDVVTYSTLIECF 553
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + A + A + FE ++ S+ + + YN ++ G V++ + +E+
Sbjct: 475 TYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEM 534
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ K + PD+ TY+ I T ++ + DEM
Sbjct: 535 QEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEM 569
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA--LVVE 83
TY LL Y A + A ++ + + + YN ++ ++ + EKV V E
Sbjct: 199 TYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYNMLLD---ALAKDEKVCSYKVFE 255
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++KR++ PD+FTY + I + D+ M G + + + Y ++ +
Sbjct: 256 DMKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLA-KGCTPNLIGYNTMIEA-LAK 313
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+V+ + ++ Q TY ++ L G +K+D I + ++K+ + +
Sbjct: 314 GRMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGKLNKLDNI---VDISKKYINKQI 370
Query: 204 YICILSSYLMLGHLKEVGEII-DQWKQSATSDFDISACNRLLGAFSDVG 251
Y + + +GH E + + W D D AC +L + G
Sbjct: 371 YAYFVRTLSKVGHASEAHRLFCNMWNFHDKGDKD--ACMSMLESLCSAG 417
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 109/262 (41%), Gaps = 40/262 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + + T++A LF+ + + N + YN M+ V+K L+ ++
Sbjct: 268 TYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKM 327
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ P+ FTY++ ++ A ++++ +D KY+N IY ++
Sbjct: 328 VENDIQPNEFTYSVILNLLVAEGKLNKLDNIVDISK----------KYIN-KQIY---AY 373
Query: 146 LVNAESSTLVEAE-KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL----RMTK---- 196
V S +E + W +D G+KD + +SL +MT+
Sbjct: 374 FVRTLSKVGHASEAHRLFCNMWNFHD--------KGDKDACMSMLESLCSAGKMTEAIDL 425
Query: 197 -----QKMTSRNYICILSSYLMLGHLKEVGEIIDQW---KQSATSDFDISACNRLLGAFS 248
+K + + I + + LG LK++ I D + KQ DI N L+ +F
Sbjct: 426 LNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPP-DIFTYNILISSFG 484
Query: 249 DVGLTEKANEFHMLLLQKNCAP 270
G + A +F L +C P
Sbjct: 485 RAGRVDIAVKFFEELENSDCKP 506
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 100/249 (40%), Gaps = 37/249 (14%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T YT ++ + EK E+FE + ++++ +N + ++ Y GQ E +
Sbjct: 80 PTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHL 139
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ +K++ V P++ TYN +++C S G DW L+N++
Sbjct: 140 LARMKKEQVEPNLITYNTVLNAC-------------------SKGGLDW---EGLLNLFA 177
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
H Q ITY+ L+ + G ++ ++K++ + +
Sbjct: 178 QMRH--------------EGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADA 223
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y ++ ++ L V E++ + + DI+ N L+ A++D G A
Sbjct: 224 VTYKSLVDTFAGSNQLGRVEELLREMEDEGNPP-DIAGYNSLIEAYADAGNVHGAAGVFK 282
Query: 262 LLLQKNCAP 270
+ + CAP
Sbjct: 283 QMQRGGCAP 291
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 2/250 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A ETY+ LL +Y E+ LF +K + YN ++ ++ G ++
Sbjct: 290 APDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESIN 349
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ ++ V PD TY+ +S C + K M + + L++ Y
Sbjct: 350 LFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNE-STPSLEASAGLISSY 408
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ +A S E + Q YD LI YA G + ++ +
Sbjct: 409 GKMAMYKDALVSYYRIREAGLDP-QVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAP 467
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ ++ +Y +G E E + +Q S+ D LLG + D+GL E+A E
Sbjct: 468 VSSVNSVMEAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEF 527
Query: 261 MLLLQKNCAP 270
+++ + + P
Sbjct: 528 VIIKETSKVP 537
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 102/286 (35%), Gaps = 58/286 (20%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ +AG+ + EEL ++ + YN ++ Y G V A V +++
Sbjct: 225 TYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQM 284
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------------ 121
+R PD+ TY+ + +QV+ +M
Sbjct: 285 QRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYF 344
Query: 122 ----------CDSGGSDDWVKYVNLVNIYITAS----------HLVNAESSTLVEAEKSI 161
DSG D Y L+++ H++ ES+ +EA
Sbjct: 345 QESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAG- 403
Query: 162 TQRQWITYDFLIILYAGLG-NKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
LI Y + KD + ++ +R Y ++ Y G E
Sbjct: 404 ----------LISSYGKMAMYKDALVSYYR-IREAGLDPQVSAYDALIQGYAKGGLYVEA 452
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
G + + A +S+ N ++ A+S VGL ++A EF L QK
Sbjct: 453 GSTLYAMNK-AGFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQK 497
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 4/247 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+SE Y+A + Y +AE+ F K+S + L +N M+ Y + EK ++
Sbjct: 498 SSECYSANIDAYGERGHILEAEKAFLCCKESR-KLSVLEFNVMIKAYGISNRYEKACQLI 556
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ ++ V+PD F+YN I A+ + K +L +M ++ D + Y +++ +I
Sbjct: 557 DSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQ-ETQLVSDCIPYCAVISSFIK 615
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
L AE E Q + Y LI +A +GN + +LR M +
Sbjct: 616 LGQLEMAE-GLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLPMNAV 674
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ Y +G+L+E E + S D+ + N ++ +S+ + ++A E
Sbjct: 675 IYNSLIKLYTKVGYLEEAQEAYKMLQASEVGP-DVYSSNCMIDLYSERSMVKQAEEIFES 733
Query: 263 LLQKNCA 269
L +K A
Sbjct: 734 LKRKGDA 740
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y +L+ + A A KA+ +++++ L + + Y +++ ++ +GQ+E + +E+
Sbjct: 570 SYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEM 629
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
NV PD+ Y + I++ A N+ + +++ + ++G + V Y +L+ +Y +
Sbjct: 630 IGYNVQPDVVVYGILINAFADVGNVREAVNYVNALR-NAGLPMNAVIYNSLIKLYTKVGY 688
Query: 146 LVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A E+ +++A S + + +I LY+ + ++I++SL+ K ++
Sbjct: 689 LEEAQEAYKMLQA--SEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLK-RKGDANEFSF 745
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 248
+L Y +G LKE +I+ + ++ D+ + N +LG ++
Sbjct: 746 AMMLCMYKRIGKLKEAFQIVQKMRELGLVT-DLLSYNNVLGFYA 788
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P +S TY L+ Y A +A + F + + + N + +N M+ + + GQ+E+
Sbjct: 319 PHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEE 378
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
A ++++++ PD TYN+ IS A NID+ + +M ++ D V Y L+
Sbjct: 379 AASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMK-EARLEPDLVSYRTLL 437
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ + HLV + E ++ + T L +Y G K +W +
Sbjct: 438 YAF-SIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKK-SWLWFRRFHLEG 495
Query: 198 KMTSRNYICILSSYLMLGHLKEV 220
M+S Y + +Y GH+ E
Sbjct: 496 NMSSECYSANIDAYGERGHILEA 518
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ + +L +YA T+ A +F+ + + + N +++ + G+ K LV
Sbjct: 185 SPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVY 244
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E++ ++PDIF+Y + +++ +D+ F+ EM S + V Y +L++ Y++
Sbjct: 245 EQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEME-RSCCEPNVVTYNSLIDGYVS 303
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ A+ + +EK I + TY LI Y G ++ ++++ + +
Sbjct: 304 LGDVCGAKKVLALMSEKGIPENSR-TYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEH 362
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
Y ++ +Y G + + I D + + CN L+ + +G KA E
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLK-MNTVICNSLINGYCKLGHVNKAAE 417
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
Y L+H Y A + A + + + + L N ++ N ++ Y +G V K A V+
Sbjct: 362 HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K N+ PD + YN + + + K DEM + G + V Y L+
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH-NKGVNFTVVTYNTLLKNLFHVG 480
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
H+ +A + ++ + + +TY L+ + +G D+ IWK
Sbjct: 481 HVEHALHIWNLMHKRGVAPNE-VTYCTLLDAFFKVGTFDRAMMIWK 525
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT +++ Y ++A + +++S N + YN ++ Y+S+G V V+ +
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + + TY L I ++Q +K M + D+ V Y L++ Y TA
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHV-YGVLIHAYCTAGR 376
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A + + I + LI Y LG+ +K ++ S++ K S Y
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVIC-NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L + + ++ D+ +F + N LL VG E A L+ +
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGV-NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494
Query: 266 KNCAPTNAS 274
+ AP +
Sbjct: 495 RGVAPNEVT 503
>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 636
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 111/251 (44%), Gaps = 7/251 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S Y L+ + K EKA ELF+ + + Y +++ Y G ++K ++E
Sbjct: 155 SGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLE 214
Query: 84 EIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E+KR + PD+ TY++ I SC D+ K L M G S + + Y L++ Y
Sbjct: 215 EMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNME-SLGISPNTITYNTLIDAYGK 273
Query: 143 ASHLVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A E +TLV+ ++++ W T + + + G + +++ ++ + + +
Sbjct: 274 AKMFEEME-ATLVKMLSQQNCEPDVW-TMNSTLRAFGISGQIETMEKCYEKFQGAGIEPS 331
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ +L SY G K++ ++ ++ Q + I N ++ AF G ++
Sbjct: 332 IMTFNVLLDSYGKAGDYKKMSAVM-EYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLF 390
Query: 261 MLLLQKNCAPT 271
L+ + P+
Sbjct: 391 RLMRSERIKPS 401
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 105/250 (42%), Gaps = 7/250 (2%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEE-LFERVKQSNLSFNALMYNEMMTLYMSVG 73
E L +S T TY L+ Y AK E+ E L + + Q N + N + + G
Sbjct: 253 ESLGISPNTI-TYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISG 311
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
Q+E + E+ + + P I T+N+ + S + ++ ++ M S + Y
Sbjct: 312 QIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQ-KYHYSWTIITY 370
Query: 134 VNLVNIYITASHLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+++ + A L E L+ +E+ + +T L+ Y +KI+ + + +
Sbjct: 371 NIVIDAFGRAGDLKQMEYLFRLMRSER--IKPSCVTLCSLVRAYGQAEKPEKIEGVLRFI 428
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
+ + + + C++ +Y +G E+ ++ +Q I+ ++ A+S G+
Sbjct: 429 ENSDITLDTVFFNCLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITY-RTMIKAYSSKGM 487
Query: 253 TEKANEFHML 262
T+ E L
Sbjct: 488 TKHVKELQDL 497
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 16/220 (7%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
LS+ Y+ ++H + + E+AEEL +++ + +Y+ MM Y + K
Sbjct: 364 LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 423
Query: 79 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEM-SCDSGGSDDWV 131
+V E +K P I +Y NL+ I A L+I + EM SC G +
Sbjct: 424 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK------EMESC--GIKHNNK 475
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
Y L+N +I NA + E +S Q Y+ LI + +GN D+ I +
Sbjct: 476 TYSMLINGFIHLHDFANA-FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 534
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + + ++R + I+ Y + G +K + +D ++S
Sbjct: 535 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 574
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA + KA E F ++K+S L + +Y ++ G+++ V E+
Sbjct: 616 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 675
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + F YN+ I A ++ + + + +M D G + Y + +N A
Sbjct: 676 SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED-GVPPNIHTYTSYINACCKAGD 734
Query: 146 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ AE ++E + + + TY LI +A + D+ + ++ +++ K +Y
Sbjct: 735 MQRAEK--VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 792
Query: 205 ICILSSYL 212
C+++S L
Sbjct: 793 HCLVTSLL 800
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 256 FERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 313
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+ VEE+K + + I TY++ IS A +N Q L + + S + + Y
Sbjct: 314 DMRGALSCVEEMKSEGLELTIVTYSILISG-FAKINDSQSADNLFKEAKTKLSSLNGIIY 372
Query: 134 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
N+++ + + ++ AE + E E+ Y ++ Y + N++K +++ L+
Sbjct: 373 SNIIHAHCQSGNMERAE-ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 431
Query: 194 MTKQKMTSRNYICILSSYLMLGHL 217
K + +Y C+L+ Y+ +G +
Sbjct: 432 ECGFKPSIISYGCLLNLYVKIGKV 455
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 105/252 (41%), Gaps = 6/252 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TYT ++ A+ T A +L + ++ S N YN ++ ++++ ++
Sbjct: 111 TVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 170
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
EE+ + PD+ TYN +I +D+ +KFL M + D V Y ++N
Sbjct: 171 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV----TPDVVSYTTVINGLCK 226
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ L ++ S L +TY LI + G ++ + S+ +
Sbjct: 227 SGDL-DSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 285
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y +L + LGH+ + +++ + ++ + D+ + N + +KA
Sbjct: 286 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTP-DVVSYNACIDGLCKAERVKKAKAVFDR 344
Query: 263 LLQKNCAPTNAS 274
++++ C P +S
Sbjct: 345 MVERGCTPNASS 356
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 103/276 (37%), Gaps = 33/276 (11%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL +KA +F+ + + +A + ++ Q+EK ++ +
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGGS 127
K VPD YN IS + + Q KFL EM C + +
Sbjct: 69 KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
Query: 128 DDWVKYVNLV-------NIYITASHLVNA--ESSTLVEAEKSITQRQWITYDFLIILY-- 176
D VK ++ + NIY T + +V E L EA+K + + Y ++ Y
Sbjct: 129 RDAVKLLDEMRDKGCSPNIY-TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 177 --AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 234
GL D++D+ K L +Y +++ G L ++D +
Sbjct: 188 FIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTP 247
Query: 235 FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
D+ + L+ F G E+A +L+ C P
Sbjct: 248 -DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP 282
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 37/199 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 61
TYTAL++ +A EKAEE+FE+++++ L S+NALM
Sbjct: 304 TYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLM 363
Query: 62 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
YN ++ Y G + V E++KR + P + ++ + +S+ + T N+
Sbjct: 364 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 423
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
+ + L++M C SG D +++N+Y E L E + TY+
Sbjct: 424 SKCEDILNQM-CKSGLKLDTFVLNSMLNLYGRLGQFGKME-EVLTVMENGSCEADISTYN 481
Query: 171 FLIILYAGLGNKDKIDQIW 189
LI Y G DK++ ++
Sbjct: 482 ILINRYGQAGFIDKMEGLF 500
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ETYT L++LY + A ++F + N Y ++ + G EK V
Sbjct: 266 STETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVF 325
Query: 83 EEIKRKNVVPDIFTYNLWI---SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
E+++ + PD+++YN + S ++ + M C+ D Y LV+
Sbjct: 326 EQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP----DRASYNILVDA 381
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
Y A L +AE + + ++ ++ L+ ++ GN K + I + + K+
Sbjct: 382 YGRAGFLNDAE-AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKL 440
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
+ +L+ Y LG ++ E++ ++ + + DIS N L+ + G +K
Sbjct: 441 DTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTYNILINRYGQAGFIDK 495
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 38/279 (13%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY L+ Y + EKAE +F +K L +A++YN + M G K +
Sbjct: 198 DTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLR 257
Query: 85 IKRKNVVPDIFTYNLWIS-------------------SCAATLNIDQ----VKKFLDEMS 121
+KR P TY + I+ S NI V F E
Sbjct: 258 MKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGL 317
Query: 122 C-----------DSGGSDDWVKYVNLVNIYITASHLVN-AESSTLVEAEKSITQRQWITY 169
C ++G D Y L+ Y A AE +L++ R +Y
Sbjct: 318 CEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SY 375
Query: 170 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 229
+ L+ Y G + + +++ ++ T ++++ +LS++ G++ + +I++Q +
Sbjct: 376 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 435
Query: 230 SATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
S D N +L + +G K E ++ +C
Sbjct: 436 SGLK-LDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSC 473
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T +++ LL ++ K E++ ++ +S L + + N M+ LY +GQ K+ V+
Sbjct: 406 TMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL 465
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 114
++ + DI TYN+ I+ ID+++
Sbjct: 466 TVMENGSCEADISTYNILINRYGQAGFIDKME 497
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 3/184 (1%)
Query: 91 VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAE 150
+P+ TY L I + + +++ + EM + G V Y + +N + + AE
Sbjct: 194 IPNEDTYALLIKAYCLSGLLEKAEAVFVEMK-NYGLPSSAVVYNSYINGLMKGGNPNKAE 252
Query: 151 SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSS 210
+ ++ + TY LI LY G +++ + K K Y ++++
Sbjct: 253 E-IFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNA 311
Query: 211 YLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ G ++ E+ +Q Q A + D+ + N L+ A+S G A E L+ C P
Sbjct: 312 FAREGLCEKAEEVFEQM-QEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEP 370
Query: 271 TNAS 274
AS
Sbjct: 371 DRAS 374
>gi|295828266|gb|ADG37802.1| AT1G07590-like protein [Capsella grandiflora]
Length = 194
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
L+YN ++ + G+ + +A + +K +P + TY++ + A NID V K D
Sbjct: 20 LVYNRLIIRNSAPGRRKLIAKDLALMKADKAIPHVSTYHILMKLEANXHNIDGVLKAFDG 79
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M +G + V Y + A AE+ T EKS+T W T D L+ILY L
Sbjct: 80 MK-KAGVEPNEVSYCIXAMAHAVARLYTVAEAYT-EXIEKSVTGDNWSTLDILMILYGRL 137
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
G + ++ + W +R + S++Y+ ++ +G+L E+
Sbjct: 138 GKEKELARTWNVIRGF-HHVRSKSYLLATEAFARVGNLDRAEEL 180
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P + ++ TY L+ Y A ++A FE + + +S + +N M+ + + GQ+++
Sbjct: 311 PHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKE 370
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
V ++++++ PD TYN+ IS A NID + EM ++G D V Y L+
Sbjct: 371 VTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEME-EAGLQPDIVSYRTLL 429
Query: 138 NIYITASHLVNAESSTLVEAEKSITQ 163
Y + H+V EAEK IT+
Sbjct: 430 YAY-SIRHMV-------AEAEKLITE 447
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 89/209 (42%), Gaps = 4/209 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++ Y K KA+++F+ +K + + + Y+ ++ + +++++
Sbjct: 528 FNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQ 587
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+V D Y++ ISS + +++ K EM G D + Y L+N + A +
Sbjct: 588 SAGLVSDCIPYSVVISSFSKLGHLEMADKLYREM-VKHGVQPDIIVYGVLINAFADAGSV 646
Query: 147 VNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
E+ V A ++ + Y+ LI LY +G + + +K L T +
Sbjct: 647 --KEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSN 704
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSD 234
C++ Y +KE EI + K+ ++
Sbjct: 705 CMIDLYSERSMVKEAEEIFESLKKKGEAN 733
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P + ++ TY L+ Y A ++A FE + + +S + +N M+ + + GQ+++
Sbjct: 310 PHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKE 369
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
V ++++++ PD TYN+ IS A NID + EM ++G D V Y L+
Sbjct: 370 VTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEME-EAGLQPDIVSYRTLL 428
Query: 138 NIYITASHLVNAESSTLVEAEKSITQ 163
Y + H+V EAEK IT+
Sbjct: 429 YAY-SIRHMV-------AEAEKLITE 446
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 89/209 (42%), Gaps = 4/209 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++ Y K KA+++F+ +K + + + Y+ ++ + +++++
Sbjct: 527 FNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQ 586
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+V D Y++ ISS + +++ K EM G D + Y L+N + A +
Sbjct: 587 SAGLVSDCIPYSVVISSFSKLGHLEMADKLYREM-VKHGVQPDIIVYGVLINAFADAGSV 645
Query: 147 VNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
E+ V A ++ + Y+ LI LY +G + + +K L T +
Sbjct: 646 --KEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSN 703
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSD 234
C++ Y +KE EI + K+ ++
Sbjct: 704 CMIDLYSERSMVKEAEEIFESLKKKGEAN 732
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 3/249 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY L++ + E AE L ++ + N +++N M+ Y G V+ +
Sbjct: 318 RTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAA 377
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+++ V DI+TYN +D+ K L M + G ++V Y L++I+
Sbjct: 378 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM-IEMGVVPNYVTYTTLISIHCKDG 436
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+V A AEK T +TY+ +I Y G+ + ++ K + Y
Sbjct: 437 DMVEARRLFREMAEKGATP-SVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTY 495
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ + + G + ++ ++ KQ T + ++ A L+ + G +E A + + +L
Sbjct: 496 ASLVHGHCVNGKVDVALKLFEEMKQRGT-EPNVVAYTALISGLAKEGRSEAAFQLYDDML 554
Query: 265 QKNCAPTNA 273
+ P ++
Sbjct: 555 KAGLIPDDS 563
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+ A L + + + +S NAL YN ++ Y+ +V ++E ++ + + + TY +
Sbjct: 194 DDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTIL 253
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ S + +I +V+ +EM ++ D ++ Y ++N Y A ++ A + L E +
Sbjct: 254 VDSLSTARDISKVEALFNEMKANNVVGDVYL-YTAVINAYCRAGNMRRA-AKVLDECVGN 311
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+ TY LI + +G + + + ++
Sbjct: 312 GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 344
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +LL Y K + +E+ E ++ + Y ++ + + KV + E+K
Sbjct: 215 YNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMK 274
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
NVV D++ Y I++ N+ + K LDE
Sbjct: 275 ANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDE 307
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ + A +AE L +++ + +Y+ MM Y +G EK +V + +K
Sbjct: 397 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 456
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 144
P + +Y I+ + I +V K L+ +M +G + Y L+N ++
Sbjct: 457 ECGFTPSVISYGCLIN---LYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLK 513
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
NA + + K + + Y+ +I + G+GN D+ + K ++ + + T+R +
Sbjct: 514 DWANA-FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTF 572
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ I+ + G ++ EI D + S
Sbjct: 573 MPIIHGFARSGDMRRALEIFDMMRWSG 599
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ TYT ++H YA T KA E F ++K L + Y ++ G+++
Sbjct: 636 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 695
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V E+ + + + F YN+ I A ++ + + + +M G D Y + +N
Sbjct: 696 VTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-QEGVQPDIHTYTSFINAC 754
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A + A + T+ E E + TY LI +A +K + ++ ++ K
Sbjct: 755 CKAGDMQRA-TKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPD 813
Query: 201 SRNYICILSSYLMLGHLKE 219
Y C+++S L + E
Sbjct: 814 KAVYHCLMTSLLSRASVAE 832
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ + A +AE L +++ + +Y+ MM Y +G EK +V + +K
Sbjct: 376 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 435
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYITAS 144
P + +Y I+ + I +V K L+ +M +G + Y L+N ++
Sbjct: 436 ECGFTPSVISYGCLIN---LYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLK 492
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
NA + + K + + Y+ +I + G+GN D+ + K ++ + + T+R +
Sbjct: 493 DWANA-FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTF 551
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ I+ + G ++ EI D + S
Sbjct: 552 MPIIHGFARSGDMRRALEIFDMMRWSG 578
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ TYT ++H YA T KA E F ++K L + Y ++ G+++
Sbjct: 615 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 674
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V E+ + + + F YN+ I A ++ + + + +M G D Y + +N
Sbjct: 675 VTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMK-QEGVQPDIHTYTSFINAC 733
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A + A + T+ E E + TY LI +A +K + ++ ++ K
Sbjct: 734 CKAGDMQRA-TKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPD 792
Query: 201 SRNYICILSSYLMLGHLKE 219
Y C+++S L + E
Sbjct: 793 KAVYHCLMTSLLSRASVAE 811
>gi|125549468|gb|EAY95290.1| hypothetical protein OsI_17116 [Oryza sativa Indica Group]
Length = 608
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + Y++++ A A + AE+L+ + + + M+ +++ +++ G+VEK
Sbjct: 294 APNATIYSSIIRSLADAHESSAAEDLYNEAWKKGMLGDPDMFLKVIVMHVEAGRVEKTMG 353
Query: 81 VVEE--------------------IKRKNVVPDIFTYNLWIS-SC-------AATLNI-- 110
V ++ +KR+ + P I Y+ I+ C A+ +N+
Sbjct: 354 VAKDMRETGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLIALGCEPGQVTYASVINVYC 413
Query: 111 -----DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 165
D+ + EM D G V Y N++++Y S +A V +K
Sbjct: 414 QLGRSDRAESVFSEM-IDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVMKKKGCEPNI 472
Query: 166 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
W+ Y+ L+ ++ LGN + ++IWK + K + +Y I++++ G L ++
Sbjct: 473 WV-YNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISYTAIINAFNRSGELDRCMDLYQ 531
Query: 226 QWKQSATSDFDISACNRLLGAFS 248
+++++ D + ++G FS
Sbjct: 532 EFRETG-GKVDTALAGLMVGVFS 553
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YTAL+ Y A+ A LF+R+ N++ +N ++ G+VE +V+ +
Sbjct: 508 YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMG 567
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + P + TY + I + D+ FLD+M SG + V Y + Y L
Sbjct: 568 KFDAKPTVHTYTILIEEILRESDFDRANMFLDQMI-SSGCQPNVVTYTAFIKAYCRQGRL 626
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 183
+ AE + E+ I +I YD L+ Y +G D
Sbjct: 627 LEAEEMVVKIKEEGILLDSFI-YDVLVNAYGCIGQLD 662
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/247 (17%), Positives = 101/247 (40%), Gaps = 3/247 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TYT+L+ Y A ++FE + Q N + Y ++ + VG++++ +
Sbjct: 225 SFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFF 284
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++K PD+ TY + +++ + KF +EM ++G + Y L++ +
Sbjct: 285 QMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMV-ENGIEPNVYTYTVLIDYFCKV 343
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ EK + + ++ LI Y G + + S+++ K SR
Sbjct: 344 GKMDEGMEMLSTMLEKGLVS-SVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRT 402
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y ++ + + ++++ ++ S ++ N L+ + + A H L+
Sbjct: 403 YNELICGFCRKKSMDRAMALLNKMYENKLSP-NLVTYNTLIHGLCKARVVDSAWRLHHLM 461
Query: 264 LQKNCAP 270
++ P
Sbjct: 462 IKDGFVP 468
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 97/245 (39%), Gaps = 39/245 (15%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 85
YT+L+ YA A +F+++++ + YN ++ +Y +G K++ +V +
Sbjct: 220 YTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGM 279
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD +TYN IS C ++ + +EM SG S D V + L+++Y
Sbjct: 280 KSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKL-SGFSPDKVTFNTLLDVY----- 333
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+S EA + + + ++ + I+ Y L
Sbjct: 334 ---GKSRRPKEAMEVLKEMEFSGFSPSIVTYNSL-------------------------- 364
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+S+Y G L+E E+ DQ + D+ LL F G+ E A +
Sbjct: 365 --ISAYARDGLLREAMELKDQMVEKGIKP-DVFTYTTLLSGFEKAGMDEPAMRIFGEMRA 421
Query: 266 KNCAP 270
C P
Sbjct: 422 AGCKP 426
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/259 (17%), Positives = 112/259 (43%), Gaps = 5/259 (1%)
Query: 14 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
FE + LS + + T+ LL +Y ++ ++A E+ + ++ S S + + YN +++ Y
Sbjct: 311 FEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYAR 370
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
G + + + +++ K + PD+FTY +S + + EM +G +
Sbjct: 371 DGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRA-AGCKPNIC 429
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
+ L+ ++ E E +T++ L+ ++ G ++ ++K
Sbjct: 430 TFNALIKMHGNRGRFAEM-MKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKE 488
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
++ + ++S+Y G ++ + + ++ + D+S+ N +L A + G
Sbjct: 489 MKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTP-DLSSYNAVLAALARGG 547
Query: 252 LTEKANEFHMLLLQKNCAP 270
L E++ + + C P
Sbjct: 548 LWEQSEKVFAEMKDGRCKP 566
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 49/81 (60%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+++++ ++ E++EE+ + + L + + YN ++ Y G+++ + + +
Sbjct: 674 TYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYM 733
Query: 86 KRKNVVPDIFTYNLWISSCAA 106
K +VPD+ TYN +++S AA
Sbjct: 734 KTYGLVPDVITYNTFVASYAA 754
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ E+A ++FE +K S S + + +N ++ +Y + ++ V++E+
Sbjct: 290 TYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEM 349
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P I TYN IS+ A + + + D+M + G D Y L++ + A
Sbjct: 350 EFSGFSPSIVTYNSLISAYARDGLLREAMELKDQM-VEKGIKPDVFTYTTLLSGFEKAG- 407
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ E + + T++ LI ++ G ++ ++++ + + +
Sbjct: 408 MDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWN 467
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L+ + G EV + + K++ + N L+ A+S G ++A + +L+
Sbjct: 468 TLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISAYSRCGSFQQAMAVYKRMLE 526
Query: 266 KNCAP 270
P
Sbjct: 527 AGVTP 531
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 6/229 (2%)
Query: 26 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
TY +L++Y G W+ K L +K S ++ + YN +++ E+ A V E
Sbjct: 254 TYNVILNVYGKMGMPWS-KISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFE 312
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+K PD T+N + + + + L EM SG S V Y +L++ Y
Sbjct: 313 EMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEF-SGFSPSIVTYNSLISAYARD 371
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L A EK I + TY L+ + G + +I+ +R K
Sbjct: 372 GLLREAMELKDQMVEKGI-KPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICT 430
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
+ ++ + G E+ ++ ++ + + DI N LL F G+
Sbjct: 431 FNALIKMHGNRGRFAEMMKVFEEIEICNCAP-DIVTWNTLLAVFGQNGM 478
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 14/254 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ AL+ ++ + ++FE ++ N + + + +N ++ ++ G +V+ V +E+
Sbjct: 430 TFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 489
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR VP+ T+N IS+ + + Q M ++G + D Y N V +
Sbjct: 490 KRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRM-LEAGVTPDLSSY-NAVLAALARGG 547
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L E + + +TY L+ YA N +I+++ +T +
Sbjct: 548 LWEQSEKVFAEMKDGRCKPNELTYCSLLHAYA---NSKEIERMHTLAEEIYSGLTEP--V 602
Query: 206 CILSSYLMLGH-----LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+L L+L + L E ++ K+ + D +S N ++ + + KANE
Sbjct: 603 PVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPD--LSTLNAMIAIYGRRQMVAKANEIL 660
Query: 261 MLLLQKNCAPTNAS 274
+ + +P+ A+
Sbjct: 661 NFMNESGFSPSLAT 674
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T A++ +Y + KA E+ + +S S + YN +M ++ E+ V++EI
Sbjct: 639 TLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEI 698
Query: 86 KRKNVVPDIFTYNLWI 101
K + PD+ +YN I
Sbjct: 699 LAKGLKPDLISYNTVI 714
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 12/262 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
E P ++ + ALL GAK + AE+ F + +S + +N +++ +GQ
Sbjct: 147 ESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQ 206
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C--AATLNIDQVKKFLDEMSCDSGGSDDWV 131
+ K V ++IK + P + TYN I C N+ V L EM ++G S V
Sbjct: 207 LRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAV 265
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
+ L+N Y S+ A E ++ +TY+ LI +GL ++ K+++ K
Sbjct: 266 TFGVLINGYCKNSNTA-AAVRVFEEMKQQGIAASVVTYNSLI---SGLCSEGKVEEGVKL 321
Query: 192 LRMTKQKMTSRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 248
+ + S N I C+L + G + + + ID + + D+ L+ +
Sbjct: 322 MEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER-NVEPDVVIYTILIDGYR 380
Query: 249 DVGLTEKANEFHMLLLQKNCAP 270
+G E A + +K +P
Sbjct: 381 RLGKMEDAMAVKEAMAKKGISP 402
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT L+ Y E A + E + + +S N YN ++T + G + +++E+K
Sbjct: 372 YTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K + D+ TYN+ I + + + K LDEMS + G + + Y ++ + ++
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS-EVGLEPNHLTYNTIIQGFCDKGNI 490
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+A EK + +TY+ I + +G D+ + + +
Sbjct: 491 KSA-YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +L + A + + + + N+ + ++Y ++ Y +G++E V E +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAM 395
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K + P++ TYN I+ + + + LDEM + G D V Y L+
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK-EKGIEADVVTYNVLIGALCCKGE 454
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L E + + +TY+ +I + GN +I + +++ Y
Sbjct: 455 VRKA-VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
+ + +G + E +++++
Sbjct: 514 VFIKYFCQIGKMDEANDLLNE 534
>gi|302791627|ref|XP_002977580.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
gi|300154950|gb|EFJ21584.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
Length = 555
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+A++ LY A T +A +L++ ++++N + + + + +Y VG + + + ++
Sbjct: 97 TYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDM 156
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ + P++ +N I + + K DEM+ G + L+++Y
Sbjct: 157 EQAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMAT-YGLEPSEITLSILIDMYTKVGA 215
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L A ++ +I Q++W + Y+ L+ GN + + + + M KQ
Sbjct: 216 LDKA-----LDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEMEMEKQWPDH 270
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
Y +++ Y G + EV + D+ K A
Sbjct: 271 MTYGILMNVYATKGMVAEVRAMFDKLKNLA 300
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 37 AKWTEKAEEL---FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 93
+K ++AE+ F R++++ +SF+ + Y+ M+ LY G+ + + + +++ N PD
Sbjct: 70 SKRCDRAEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPD 129
Query: 94 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 153
+ ++ + + + + + + +M + + V + L+ A + A+
Sbjct: 130 LVSFGVIANVYSRVGDYQAILRLFRDME-QAEIKPNVVLFNTLIGTLGRAGKVTLAKGMF 188
Query: 154 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 213
A + + IT LI +Y +G DK ++ +++ K K+ Y +L S +
Sbjct: 189 DEMATYGLEPSE-ITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVE 247
Query: 214 LGHLKEVGEII------DQWKQSAT 232
G+++ +I QW T
Sbjct: 248 SGNIQRAESLIAEMEMEKQWPDHMT 272
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Query: 4 VFGIHSGERYFEGLPLSAK--------TSETYTALLHLYAGAKWTEKAEELFERVKQSNL 55
+FG+ ++ E L+++ Y AL+ + A EKA + ++++
Sbjct: 342 IFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGC 401
Query: 56 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
+ + YN ++ Y S+G +K ++ +++ V PD ++YN+ + +D+
Sbjct: 402 EPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFA 461
Query: 116 FL-DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 174
F+ D M + GG D V L++ + A VN+ + E Q +TY LI
Sbjct: 462 FVSDHM--EVGGFCDIVSCNILIDAFCRAKK-VNSALNLFKEMGYKGIQADAVTYGILIN 518
Query: 175 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
G+G + ++++ + TK Y +L + +GH K +I Q Q S
Sbjct: 519 GLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVS 577
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ G ++ AEELF+++ + + N +YN M+ VG + + ++
Sbjct: 512 TYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQM 571
Query: 86 KRKNVVPDIFTYNLWI 101
+K V PD T+N I
Sbjct: 572 TQKEVSPDTVTFNTLI 587
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Query: 4 VFGIHSGERYFEGLPLSAK--------TSETYTALLHLYAGAKWTEKAEELFERVKQSNL 55
+FG+ ++ E L+++ Y AL+ + A EKA + ++++
Sbjct: 342 IFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGC 401
Query: 56 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
+ + YN ++ Y S+G +K ++ +++ V PD ++YN+ + +D+
Sbjct: 402 EPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFA 461
Query: 116 FL-DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 174
F+ D M + GG D V L++ + A VN+ + E Q +TY LI
Sbjct: 462 FVSDHM--EVGGFCDIVSCNILIDAFCRAKK-VNSALNLFKEMGYKGIQADAVTYGILIN 518
Query: 175 LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
G+G + ++++ + TK Y +L + +GH K +I Q Q S
Sbjct: 519 GLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVS 577
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ G ++ AEELF+++ + + N +YN M+ VG + + ++
Sbjct: 512 TYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQM 571
Query: 86 KRKNVVPDIFTYNLWI 101
+K V PD T+N I
Sbjct: 572 TQKEVSPDTVTFNTLI 587
>gi|302759176|ref|XP_002963011.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
gi|300169872|gb|EFJ36474.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii]
Length = 2074
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 1699 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 1755
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1756 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1813
Query: 136 -LVNIYITASHLVNAE 150
L++ Y+ A + A+
Sbjct: 1814 ALIDGYLKAREVEPAK 1829
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 186 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 245
Query: 74 Q----VEKVALVVEEIKRK---NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 246 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 304
Query: 127 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLV--EAEKSI 161
S D V Y ++V+ + +A +L A E+ T V A+
Sbjct: 305 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 364
Query: 162 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 212
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 365 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 423
Query: 213 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 424 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 481
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 13/250 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY L+ + A + A +L E +Q ++ MYN + G+V + VV+
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K PD+ T+N I+ +D+ ++ LDEM SG + + V Y L+N +A
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAG 138
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 202
+ E+ +++ + Q TY+ +I G +ID+ + L KQ+
Sbjct: 139 R--SGEAVLVMQGMTTTPDTQ--TYNAII---HGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 203 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y +++ +L++ E++ + + A N L+ + ++A E
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 261 MLLLQKNCAP 270
+L+ CAP
Sbjct: 252 SSMLEHGCAP 261
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 6/162 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY+ L++ + KA+EL E + + + + + +N ++ Y +++ ++
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ PD+ TY+ I ++D+ L++M G D V Y LV A
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMV-SRGCKPDVVTYTVLVTGLCKAG 312
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 186
+V A E T +TY +++ GL DK+D
Sbjct: 313 KMVEACRLVKRMLEDGCTP-NAVTYS---LVFDGLCKIDKLD 350
>gi|302797108|ref|XP_002980315.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
gi|300151931|gb|EFJ18575.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii]
Length = 2030
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 1655 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 1711
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1712 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1769
Query: 136 -LVNIYITASHLVNAE 150
L++ Y+ A + A+
Sbjct: 1770 ALIDGYLKAREVEPAK 1785
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T A++ +Y + KA E+ + +K+ + + YN +M +Y E+ ++ EI
Sbjct: 623 TLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREI 682
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PDI +YN I + + + L EM +SG + D + Y + Y S
Sbjct: 683 LAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMR-ESGPAPDIITYNTFIASYAADSM 741
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
V A + Q TY+ ++ Y L +D+ +LR
Sbjct: 742 FVEAIDVVCYMIKHGCKPNQS-TYNSIVDWYCKLNRRDEASMFVNNLR 788
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 107/246 (43%), Gaps = 5/246 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL +Y ++ +++A E+ + ++ + + + YN +++ Y G +E + ++
Sbjct: 308 TYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQM 367
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD+FTY +S + +EM + G + + L+ ++
Sbjct: 368 VEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR-NEGCKPNICTFNALIKMHGNRGK 426
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
E + E K+ +T++ L+ ++ G ++ ++K ++ +
Sbjct: 427 FT--EMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTF 484
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++SSY G + + + ++ + D+S+ N +L A + GL +++ + +
Sbjct: 485 NTLISSYSRCGSFDQAMAVYKRMLEAGVNP-DLSSYNAVLAALARGGLWKQSEKVLAEMK 543
Query: 265 QKNCAP 270
C P
Sbjct: 544 DGRCKP 549
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 85
YT+++ + +A +F+++++ + YN ++ +Y +G K+ +V+ +
Sbjct: 203 YTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRM 262
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD +TYN IS C ++ L EM +G S D V Y L+++Y S
Sbjct: 263 KSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL-AGFSPDKVTYNALLDVY-GKSR 320
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L E E + +TY+ LI YA G + ++ + K Y
Sbjct: 321 RSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYT 380
Query: 206 CILSSYLMLGHLKEVGEIIDQWK 228
+LS + G K +I ++ +
Sbjct: 381 TLLSGFEKAGKDKAAVQIFEEMR 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 14/254 (5%)
Query: 9 SGERYFEGLPLSAKTSE--------TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFN 58
S RY E + + K E TY +L++Y G W K L +R+K + ++ +
Sbjct: 212 SNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWN-KMVGLVDRMKSAGIAPD 270
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ YN +++ E+ A V++E+K PD TYN + + + + L
Sbjct: 271 SYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQ 330
Query: 119 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 178
EM +G V Y +L++ Y L +A EK I + TY L+ +
Sbjct: 331 EME-GNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGI-KPDVFTYTTLLSGFEK 388
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
G QI++ +R K + ++ + G E+ ++ + K S DI
Sbjct: 389 AGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSP-DIV 447
Query: 239 ACNRLLGAFSDVGL 252
N LL F G+
Sbjct: 448 TWNTLLSVFGQNGM 461
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 26 TYTALLHLYAGAKWTEK----AEELF---------------------------ER----V 50
TY +LLH YA K E+ AEE++ ER +
Sbjct: 553 TYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLEL 612
Query: 51 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
+Q S + N M+++Y V K +++ +KR P + TYN + + + N
Sbjct: 613 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 672
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
++ ++ L E+ G D + Y ++ Y + +A S L E +S ITY+
Sbjct: 673 ERSEEILREILA-KGIRPDIISYNTVIYAYCRNGRMRDA-SRVLSEMRESGPAPDIITYN 730
Query: 171 FLIILYAG 178
I YA
Sbjct: 731 TFIASYAA 738
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 9/253 (3%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A S TY L+ E+A + + +K + S + + YN ++ +Y + ++
Sbjct: 268 APDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAME 327
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V++E++ P I TYN IS+ A ++ + ++M + G D Y L++ +
Sbjct: 328 VLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQM-VEKGIKPDVFTYTTLLSGF 386
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A A E + T++ LI ++ GN+ K ++ K K
Sbjct: 387 EKAGK-DKAAVQIFEEMRNEGCKPNICTFNALIKMH---GNRGKFTEMMKVFEDIKTFQC 442
Query: 201 SRNYI---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
S + + +LS + G EV + + K++ + N L+ ++S G ++A
Sbjct: 443 SPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP-ERDTFNTLISSYSRCGSFDQAM 501
Query: 258 EFHMLLLQKNCAP 270
+ +L+ P
Sbjct: 502 AVYKRMLEAGVNP 514
>gi|297723401|ref|NP_001174064.1| Os04g0583150 [Oryza sativa Japonica Group]
gi|38346804|emb|CAE04154.2| OSJNBa0088A01.11 [Oryza sativa Japonica Group]
gi|125591406|gb|EAZ31756.1| hypothetical protein OsJ_15910 [Oryza sativa Japonica Group]
gi|215686818|dbj|BAG89668.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675722|dbj|BAH92792.1| Os04g0583150 [Oryza sativa Japonica Group]
Length = 606
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + Y++++ A A + AE+L+ + + M+ +++ +++ G+VEK+
Sbjct: 292 APNATIYSSIIRSLADAHESSAAEDLYNEAWKKGRLGDPDMFLKVIVMHVEAGRVEKIMG 351
Query: 81 VVEE--------------------IKRKNVVPDIFTYNLWIS-SC-------AATLNI-- 110
V ++ +KR+ + P I Y+ I+ C A+ +N+
Sbjct: 352 VAKDMRETGLRVTDCILSTIVNGFVKRRGLKPAIRAYDKLIALGCEPGQVTYASVINVYC 411
Query: 111 -----DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQ 165
D+ + EM D G V Y N++++Y S +A V +K
Sbjct: 412 QLGRSDRAESVFSEM-IDRGFDKCVVAYGNMISMYGKISRASDAMRLLAVMKKKGCEPNI 470
Query: 166 WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
W+ Y+ L+ ++ LGN + ++IWK + K + +Y I++++ G L ++
Sbjct: 471 WV-YNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISYTAIINAFNRSGELDRCMDLYQ 529
Query: 226 QWKQSATSDFDISACNRLLGAFS 248
+++++ D + ++G FS
Sbjct: 530 EFRETG-GKVDTALAGLMVGVFS 551
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL+ Y A ++A LF ++ + L+ L YN ++ Y +G +E+ + EE+
Sbjct: 380 TYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 439
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +PD+ TY + + ++ ++F DEM G D Y + +T
Sbjct: 440 VEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM-LSKGLQPDCFAYNTRIRAELTLGA 498
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A V + I+ +TY+ LI GN + + + + Y
Sbjct: 499 IAKAFRLREVMMLEGISS-DTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYT 557
Query: 206 CILSSYLMLGHLKEV 220
C++ ++ G L+E
Sbjct: 558 CLIHAHCERGLLREA 572
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ L+
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+++ + P + TYN+ I ++++ ++ +EM + G D Y I +
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM-VEQGCLPDVCTYT----ILM 455
Query: 142 TASH 145
SH
Sbjct: 456 KGSH 459
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 15 EGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
EG+ LS K S TY L+ + +KA++L ++ + + YN M+ + G
Sbjct: 298 EGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSG 357
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYN 98
QVE + E++ + PD+ TYN
Sbjct: 358 QVEAAQVKFVEMRAMGLQPDVITYN 382
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
E+A E+ E ++ S + ++ YN ++T ++ G V+K + E++ + ++P + TYN
Sbjct: 291 EEAAEMVEGMRLSKKA-SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAM 349
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA--ESSTLVEAE 158
I + ++ + EM G D + Y +L+N Y A L A L A
Sbjct: 350 IHGLLQSGQVEAAQVKFVEMRA-MGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408
Query: 159 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
+ T +TY+ LI Y LG+ ++ R K++M + + + +Y +L
Sbjct: 409 LAPT---VLTYNILIDGYCRLGDLEEA-------RRLKEEMVEQGCLPDVCTYTIL 454
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 91/211 (43%), Gaps = 6/211 (2%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRK--NVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
YN ++ ++ G+ +KVA++++E++ + +P+ T+N+ I+ A ++++ + ++
Sbjct: 240 YNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEG 299
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
M S Y L+ + + A+ L E E +TY+ +I
Sbjct: 300 MRLSKKASS--FTYNPLITGLLAKGFVKKADDLQL-EMENEGIMPTVVTYNAMIHGLLQS 356
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G + + +R + Y +L+ Y G LKE + + + + ++
Sbjct: 357 GQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTY 416
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
N L+ + +G E+A ++++ C P
Sbjct: 417 -NILIDGYCRLGDLEEARRLKEEMVEQGCLP 446
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 14/263 (5%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV G+ E++ E +P S + Y LL +KAE +F +++ L
Sbjct: 60 IAKVLGLWKAEKFIEKIPESFRGKLVYQTLLASCVSVLNIKKAESVFRKMRDLGLPITVE 119
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+M+ +Y + + +K+ ++ +K +N+ P TY L I + + ++K ++ M
Sbjct: 120 ACEQMIIIYKRL-EKKKIPNILLMMKDQNIKPSFLTYKLLIDAKCQFNDTTGMEKLVEAM 178
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGL 179
+ G D + YI+ L + L + EK + + L+ LYA L
Sbjct: 179 R-NEGMELDVFALAVIARHYISVG-LKDKADLILKQIEKRKQKGGGLGARRSLLSLYASL 236
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE---VGEIIDQWKQSATSDFD 236
GN D++ +IWK + ++ I + ++ LG ++E V E++ Q ++ T +
Sbjct: 237 GNADEVGRIWKECKADPKQSEC---IAAIRAWGKLGKVEEAEAVSEMMLQTWKNPTFGYY 293
Query: 237 ISACNRLLGAFSDVGLTEKANEF 259
S LL + D LT K +
Sbjct: 294 TS----LLNVYIDNNLTSKGKDL 312
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 3/155 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEI 85
YT L++ Y+ + A LF +++Q + + YN ++ +Y +G V +VE +
Sbjct: 196 YTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAM 255
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + V PD++TYN IS C ++ +M + G + D V Y L++++ S
Sbjct: 256 RSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLE-GFTPDKVTYNALLDVF-GKSR 313
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
L E E + +TY+ LI YA G
Sbjct: 314 RPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGG 348
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 51/81 (62%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+++Y+ ++ +K+EE+ V + + + + YN ++ Y G++++ + + E+
Sbjct: 651 TYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEM 710
Query: 86 KRKNVVPDIFTYNLWISSCAA 106
K +VPD+ TYN +I++ AA
Sbjct: 711 KDSALVPDVVTYNTFIATYAA 731
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 111/264 (42%), Gaps = 7/264 (2%)
Query: 14 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
F+ + L T + TY ALL ++ ++ ++A ++ + ++ + S ++ YN +++ Y
Sbjct: 287 FQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAK 346
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
G +E+ + ++ K + PD+FTY +S D + EM G +
Sbjct: 347 GGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRA-VGCKPNIC 405
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWK 190
+ L+ ++ AE + + K +T++ L+ ++ G ++ I+K
Sbjct: 406 TFNALIKMHGNRGKF--AEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFK 463
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
++ + ++S+Y G + + ++ D+S N +L A +
Sbjct: 464 EMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVP-DLSTYNAVLAALARG 522
Query: 251 GLTEKANEFHMLLLQKNCAPTNAS 274
GL E++ + + C P S
Sbjct: 523 GLWEQSEKVLAEMEDGRCKPNELS 546
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/314 (18%), Positives = 117/314 (37%), Gaps = 71/314 (22%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL ++ + +F+ +K++ +N +++ Y G ++ V + +
Sbjct: 441 TWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSM 500
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
VVPD+ TYN +++ A +Q +K L EM D + + Y +L++ Y
Sbjct: 501 LEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEME-DGRCKPNELSYSSLLHAYANGKE 559
Query: 146 ---------------------------LVNAESSTLVEAEKSITQ--RQWI--------- 167
LVN++S L+E E++ + R+ I
Sbjct: 560 IERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNA 619
Query: 168 -------------------------------TYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
TY+ L+ +Y+ N K ++I + +
Sbjct: 620 MLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKG 679
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
K +Y ++ +Y G +KE I + K SA D+ N + ++ + +A
Sbjct: 680 MKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVP-DVVTYNTFIATYAADSMFAEA 738
Query: 257 NEFHMLLLQKNCAP 270
+ ++++ C P
Sbjct: 739 IDVVRYMIKQGCKP 752
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ AL+ ++ + ++F+ +K N S + + +N ++ ++ G +V+ + +E+
Sbjct: 406 TFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEM 465
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR V + T+N IS+ + + DQ M ++G D Y N V +
Sbjct: 466 KRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSM-LEAGVVPDLSTY-NAVLAALARGG 523
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
L L E E + ++Y L+ YA
Sbjct: 524 LWEQSEKVLAEMEDGRCKPNELSYSSLLHAYA 555
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 16/220 (7%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
LS+ Y+ ++H + + E+AEEL +++ + +Y+ MM Y + K
Sbjct: 342 LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 401
Query: 79 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEM-SCDSGGSDDWV 131
+V E +K P I +Y NL+ I A L+I + EM SC G +
Sbjct: 402 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK------EMESC--GIKHNNK 453
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
Y L+N +I NA + E +S Q Y+ LI + +GN D+ I +
Sbjct: 454 TYSMLINGFIHLHDFANA-FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 512
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + + ++R + I+ Y + G +K + +D ++S
Sbjct: 513 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 552
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA + KA E F ++K+S L + +Y ++ G+++ V E+
Sbjct: 594 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 653
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + F YN+ I A ++ + + + +M D G + Y + +N A
Sbjct: 654 SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED-GVPPNIHTYTSYINACCKAGD 712
Query: 146 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ AE ++E + + + TY LI +A + D+ + ++ +++ K +Y
Sbjct: 713 MQRAEK--VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 770
Query: 205 ICILSSYL 212
C+++S L
Sbjct: 771 HCLVTSLL 778
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 234 FERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 291
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+ VEE+K + + I TY++ IS A +N Q L + + S + + Y
Sbjct: 292 DMRGALSCVEEMKSEGLELTIVTYSILISG-FAKINDSQSADNLFKEAKTKLSSLNGIIY 350
Query: 134 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
N+++ + + ++ AE + E E+ Y ++ Y + N++K +++ L+
Sbjct: 351 SNIIHAHCQSGNMERAE-ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 409
Query: 194 MTKQKMTSRNYICILSSYLMLGHL 217
K + +Y C+L+ Y+ +G +
Sbjct: 410 ECGFKPSIISYGCLLNLYVKIGKV 433
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 13/250 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY L+ + A + A +L E +Q ++ MYN + G+V + VV+
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K PD+ T+N I+ +D+ ++ LDEM SG + + V Y L+N +A
Sbjct: 80 MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAG 138
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 202
+ E+ +++ + Q TY+ +I G +ID+ + L KQ+
Sbjct: 139 R--SGEAVLVMQGMTTTPDTQ--TYNAII---HGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 203 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y +++ +L++ E++ + + A N L+ + ++A E
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251
Query: 261 MLLLQKNCAP 270
+L+ CAP
Sbjct: 252 SSMLEHGCAP 261
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 6/162 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY+ L++ + KA+EL E + + + + + +N ++ Y +++ ++
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ PD+ TY+ I ++D+ L++M G D V Y LV A
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMV-SRGCKPDVVTYTVLVTGLCKAG 312
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 186
+V A E T +TY +++ GL DK+D
Sbjct: 313 KMVEACRLVKRMLEDGCTP-NAVTYS---LVFDGLCKIDKLD 350
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 50/240 (20%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY L++ A E+AEELF + S N+++Y ++ + G++++ +
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+E+ PD+ T+ + I + N +Q K +EM GG V
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM--RGGCKPNV---------- 400
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT- 200
+TY +I GL KI ++ + R+ K +
Sbjct: 401 -------------------------VTYTTII---QGL---SKIGRVANAFRIMKGMIAH 429
Query: 201 -----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
S YIC+L + LG L E +++D+ + ++S ++ + L+ D G EK
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP-NLQLYSSLVNGLCDGGSVEK 488
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 8/250 (3%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY +L+ L +W++ A + + V + ++ N + + ++ +++ G+ + + EE
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ R+ V PD+FTYN I+ +D+ K+ LD M G D V Y L+N + S
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV-TKGCLPDVVTYNTLINGF-CKS 327
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
V+ + E + ITY+ +I Y G D +I+ + + R Y
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTY 384
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+L M +++ + + ++S + DI+ N ++ +G E A + L
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEI-ELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 265 QKNCAPTNAS 274
K P S
Sbjct: 444 CKGLKPDVVS 453
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 16/254 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++ Y A + A F R+ L + +N ++ + + + V L+ + +
Sbjct: 173 FITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCR 232
Query: 87 RK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K +VP++FT N+ + + +ID + L+EM G + V Y ++ Y++
Sbjct: 233 KKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPA-MGFIPNVVTYTTILGGYVSKGD 291
Query: 146 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+V A V E I R W+ TY L+ Y G ++ + + +
Sbjct: 292 MVGARR---VFGE--ILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPND 346
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA--CNRLLGAFSDVGLTEKANEF 259
Y I+ +Y K+ GE+++ + S+ C R++ + G E A E
Sbjct: 347 VTYGVIIEAYC---KEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACEL 403
Query: 260 HMLLLQKNCAPTNA 273
LL+KNC P NA
Sbjct: 404 WKKLLKKNCTPDNA 417
>gi|302797110|ref|XP_002980316.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
gi|300151932|gb|EFJ18576.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii]
Length = 1527
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ Y S G
Sbjct: 1148 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLEPNLIVYNNVILSYGSSGFP 1204
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1205 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1262
Query: 136 -LVNIYITASHLVNAE 150
L++ Y+ A + A+
Sbjct: 1263 ALIDGYLKAREVEPAK 1278
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ +A + A LF+ +K++ L A +Y +M +Y VG+VE+ +V+E+
Sbjct: 226 TYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEM 285
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + +FTY I + ++ M D G D V NL+NI ++H
Sbjct: 286 RARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKD-GCKPDVVLMNNLINILGRSNH 344
Query: 146 LVNA 149
L +A
Sbjct: 345 LRDA 348
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 10/235 (4%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY ++ L+ +A FER+K+ + ++ Y+ ++ Y +VEK L++EE
Sbjct: 366 TYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEE 425
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K P Y I++ D + E+ + G S V Y ++ +
Sbjct: 426 MDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARV-YAVMIKHFGKCG 484
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 203
L N + E +K Y+ L+ G+ +++D+ + R ++ + +
Sbjct: 485 RL-NEAINLFNEMKKLGCTPDVYAYNALM---TGMVRAERMDEAFSLFRTMEENGCTPDI 540
Query: 204 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ IL+ G K E+ + K S T D+ + N +LG S GL E+A
Sbjct: 541 NSHNIILNGLARTGGPKGALEMFTKMKNS-TIKPDVVSFNTILGCLSRAGLFEEA 594
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
+ ++ + AK +A +F +VK A YN ++ + M G EKV + E+
Sbjct: 157 SEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCS 216
Query: 88 K-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + PD TY+ IS+ A D + DEM ++G Y L+ IY +
Sbjct: 217 EVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMK-ENGLQPTAKIYTTLMGIYFKVGKV 275
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
E+ LV+ ++ +R +T L GLG +++ + + + + + +
Sbjct: 276 --EEALGLVKEMRA--RRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVL 331
Query: 207 ILSSYLMLG---HLKEVGEIIDQWK 228
+ + +LG HL++ ++ D+ K
Sbjct: 332 MNNLINILGRSNHLRDAIKLFDEMK 356
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM-TLYMSVGQVEKVALVVEEIKRK 88
L+++ + A +LF+ +K N + N + YN ++ +L+ + + + + E +K+
Sbjct: 335 LINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKD 394
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+VP FTY++ I T +++ L+EM + G Y +L+N
Sbjct: 395 GIVPSSFTYSILIDGYCKTNRVEKALLLLEEMD-EKGFPPCPAAYCSLIN 443
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ + + +++ +Y E+A E+F R+K+ + +YN ++ + +++ + +V
Sbjct: 109 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 168
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++KR P++FTYN+ + + +D KK L EMS + G + V Y +++
Sbjct: 169 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS-NKGCCPNAVSYTTVIS 223
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 8/250 (3%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY +L+ L +W++ A + + V + ++ N + + ++ +++ G+ + + EE
Sbjct: 152 TYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 210
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ R+ V PD+FTYN I+ +D+ K+ LD M G D V Y L+N + S
Sbjct: 211 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV-TKGCLPDVVTYNTLINGF-CKS 268
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
V+ + E + ITY+ +I Y G D +I+ + + R Y
Sbjct: 269 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTY 325
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+L M +++ + + ++S + DI+ N ++ +G E A + L
Sbjct: 326 SILLYGLCMNWRVEKALVLFENMQKSEI-ELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 384
Query: 265 QKNCAPTNAS 274
K P S
Sbjct: 385 CKGLKPDVVS 394
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27270-like
[Cucumis sativus]
Length = 1062
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY ++ +Y + +KA E+F + S LS + Y +++ Y G+ + +L+ +E
Sbjct: 809 QTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKE 868
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + V P + +YN+ ++ A ++ + L M D+ D + Y +L+ Y +
Sbjct: 869 MLEEGVKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFT-YFSLIRAYTQSC 927
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
AE EK I YD L+ A G K ++++ L+ S +
Sbjct: 928 KYSEAEKIINSMQEKGIPT-TCAHYDLLLSALAKAGMIRKAERVYDELQTAG---LSPDV 983
Query: 205 IC---ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
C ++ YL G+++E + + + A F +SA
Sbjct: 984 TCNRTLMRGYLDYGYVREGIKFFESTCKYAGDRFIMSAA 1022
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 11/232 (4%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AE + L + + +N + + G++ + + E + +VP I TYN IS
Sbjct: 757 AENVVRASLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMIS 816
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV-EAEKSI 161
+D+ + + + SG S D Y NL++ Y A E+S L E +
Sbjct: 817 VYGRGRKLDKAVEMFN-AARSSGLSPDEKAYTNLISCYGKAGK--THEASLLFKEMLEEG 873
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
+ ++Y+ ++ +YA G ++ + + K++ S Y ++ +Y E
Sbjct: 874 VKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAE 933
Query: 222 EIIDQWKQSATSDFDISAC---NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+II+ ++ + C + LL A + G+ KA + L +P
Sbjct: 934 KIINSMQEKGIP----TTCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSP 981
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT +L Y + AEE F + + L + + M+ Y G + + +
Sbjct: 191 VYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKTMLSFYSAV 250
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + +VP I +N +SS +VK+ +M + G + Y ++N + H
Sbjct: 251 KDRGIVPPIAVFNFMLSSLQKKGLHAKVKELWMQM-VEIGVTFSDFTYTVVINSLVKEGH 309
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A E + + +TY+ LI L N D++ +++K +R + + NY
Sbjct: 310 SEEA-FKVFNEMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMR--DKDIVPSNYT 366
Query: 206 CILSSYLML 214
C SS L L
Sbjct: 367 C--SSLLTL 373
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 74 Q----VEKVALVVEEIKRK---NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 224 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 282
Query: 127 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLV--EAEKSI 161
S D V Y ++V+ + +A +L A E+ T V A+
Sbjct: 283 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 342
Query: 162 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 212
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 343 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 401
Query: 213 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 402 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 459
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats.
Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F LP ++T+ +YT+L+ YA E+A L +++K + ++ A YN ++
Sbjct: 164 FHDLPAESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARAT 223
Query: 74 Q----VEKVALVVEEIKRK---NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
+ + + E++ +V PD+ TYN +++ A DQ + L M ++G
Sbjct: 224 DPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTM-LEAGV 282
Query: 127 SDDWVKYVNLVNIYITASHLVNA-----------------------ESSTLV--EAEKSI 161
S D V Y ++V+ + +A +L A E+ T V A+
Sbjct: 283 SPDTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVA 342
Query: 162 TQRQW---------ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYL 212
RQ TY L+ LY G D + Q+++ +R T+ Y + +
Sbjct: 343 VLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTA-TYNVLFRVFG 401
Query: 213 MLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
G KEV E+ ++ D+ C ++ A GL A E + ++ PT
Sbjct: 402 DGGFFKEVVELFHDMLKTGVQP-DMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPT 459
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 13 YFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
YFE + + T Y LL +A A T++ + LF+ + +S +S + YN ++ Y
Sbjct: 72 YFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAY 131
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
G ++++ V+ +K PD+ T+N+ I S D++++ + S
Sbjct: 132 GKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSL-LRSKERPT 190
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQI 188
+ +++ Y A AES +VE + + + ++T + LII+YA K Q+
Sbjct: 191 HPTFNSMITNYGRARLREKAES--VVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQV 248
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ L ++ K+ + +L +Y M G E ++D
Sbjct: 249 FDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLD 285
>gi|225427240|ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic [Vitis vinifera]
Length = 723
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++T TAL+ +Y A+W A EL+ER++ + + ++YN ++++ +G E+ + E
Sbjct: 374 AKTLTALVKIYGKARWARDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFE 433
Query: 84 EIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
++K+ ++ PD ++Y ++ + N+D+ + DEMS
Sbjct: 434 DMKKSEHCRPDSWSYTAMLNIYGSGGNVDRAMQLFDEMS 472
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+A+L +YA E+ L+ER + S + + + + ++ G + + V++E+
Sbjct: 271 TYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEM 330
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V P++ YN + + + +EM SG D LV IY A
Sbjct: 331 KSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEM-VGSGVIPDAKTLTALVKIYGKARW 389
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMT 200
+A +E + + W I Y+ L+ + A LG +++ +++++ ++ ++ +
Sbjct: 390 ARDA-----LELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPD 444
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQ 226
S +Y +L+ Y G++ ++ D+
Sbjct: 445 SWSYTAMLNIYGSGGNVDRAMQLFDE 470
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 13 YFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
YFE + + T Y LL +A A T++ + LF+ + +S +S + YN ++ Y
Sbjct: 185 YFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAY 244
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
G ++++ V+ +K PD+ T+N+ I S D++++ + S
Sbjct: 245 GKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSL-LRSKERPT 303
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQI 188
+ +++ Y A AES +VE + + + ++T + LII+YA K Q+
Sbjct: 304 HPTFNSMITNYGRARLREKAES--VVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQV 361
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ L ++ K+ + +L +Y M G E ++D
Sbjct: 362 FDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLD 398
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 23/265 (8%)
Query: 6 GIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNLSF 57
G G+R ++ L + + E Y ++ +K + A +L R++ +
Sbjct: 160 GFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRP 219
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
+A+ YN +++ + G+ + +V + ++ + PD+FT+N I +C I + ++
Sbjct: 220 DAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELY 279
Query: 118 DEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLII 174
+EM S D D V Y L+ S L AE K +TY LI
Sbjct: 280 EEMIRRSLDP----DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFP-DVVTYSILI- 333
Query: 175 LYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSA 231
G K++ K Q+ RN Y ++ Y G L V E I +W
Sbjct: 334 --NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKL-NVAEEIFKWMVFC 390
Query: 232 TSDFDISACNRLLGAFSDVGLTEKA 256
+I N LL D G EKA
Sbjct: 391 GVPPNIITYNVLLHGLCDNGKIEKA 415
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ + TYT L+ Y A AEE+F+ + + N + YN ++ G++EK +
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALV 417
Query: 81 VVEEIKRKNVVPDIFTYNLWISS-CAA 106
++ ++++ + DI TYN+ I C A
Sbjct: 418 ILADMQKSGMDADIVTYNIIIRGMCKA 444
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L++ Y +K E +LF + Q + N + Y ++ Y G++ V EEI
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN----VAEEI 383
Query: 86 KR----KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ V P+I TYN+ + I++ L +M SG D V Y ++
Sbjct: 384 FKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ-KSGMDADIVTYNIIIRGMC 442
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
A + +A K +T W ++ LY G + + D +++ ++
Sbjct: 443 KAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKK-GLRGEADALFRKMK 493
>gi|224137224|ref|XP_002322504.1| predicted protein [Populus trichocarpa]
gi|222867134|gb|EEF04265.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 54/95 (56%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL Y A++ E ++++ +K+ LS N L+YN ++ + +G V++ + E++
Sbjct: 300 TYAALLRAYGRARYGEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAIEIFEDM 359
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K + PD +T++ I+ + + + + L+EM
Sbjct: 360 KNSGISPDSWTFSSMITMSSCCGKVSEAENMLNEM 394
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 13 YFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
+FE +P + T++ ++ Y EKA L++R + + ++ ++ +Y
Sbjct: 180 WFEKMPSFGLDPDDVTFSTMIDSYGRVGNVEKALSLYDRARTEKWRLDTTTFSTLIRIYK 239
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
G + V EE+K V P++ YN + + Q KKF ++ DSG S +
Sbjct: 240 DSGNFDCCLNVYEEMKALGVKPNLVIYNTLLDAMGRARRPWQAKKFYQDI-IDSGLSPSY 298
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKID 186
Y L+ Y A + ++ K + +++ + Y+ ++ + A LG D+
Sbjct: 299 ATYAALLRAYGRARY-----GEDTIKIYKEMKEKELSLNVLLYNTILAMCADLGFVDEAI 353
Query: 187 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
+I++ ++ + S + +++ G + E ++++
Sbjct: 354 EIFEDMKNSGISPDSWTFSSMITMSSCCGKVSEAENMLNE 393
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +L + A + ++A E+FE +K S +S ++ ++ M+T+ G+V + ++ E+
Sbjct: 336 YNTILAMCADLGFVDEAIEIFEDMKNSGISPDSWTFSSMITMSSCCGKVSEAENMLNEMF 395
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
P+IF I ID V K + +
Sbjct: 396 EAGFQPNIFVLTSLIQCYGKAQRIDDVVKTFNRL 429
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 107/248 (43%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L+ +A+++ E ++ + L YN +M VGQ+E + E +
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + ++F+YN+ I+ ID+ +F +EM G V Y L+ +
Sbjct: 1252 ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR-PKGLKPSTVTYNTLIGALCQSGR 1310
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSR 202
+ A+ VE + T Q++ +L GL G+ ++ +++S++ T+ K
Sbjct: 1311 VRTAQ-KLFVEMQ---TCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIE 1366
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
+ +L G L+E + D+ ++ D A N L+ + G+ +A +
Sbjct: 1367 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEP-DTIAYNILINGLCNKGMLSEAVKLLWQ 1425
Query: 263 LLQKNCAP 270
+ +K C P
Sbjct: 1426 MEEKGCLP 1433
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P S TS AL+H GA +A + + + + L + + YN ++ + + G+
Sbjct: 482 KGSPASKVTS---NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 538
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
VE + EE+ ++ + PDI+TYN + +D K DE SG + Y
Sbjct: 539 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKA-SGLISNIHTYG 597
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
++ Y A+ + + E + E + I Y+ +I + GN Q+ ++++
Sbjct: 598 IMMEGYCKANRIEDVE-NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 656
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
Y ++ +G +++ +ID+ ++ ++ L+G + +G +
Sbjct: 657 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVP-NVVCYTALIGGYCKLGQMD 715
Query: 255 KANEFHMLLLQKNCAP 270
A + ++ N P
Sbjct: 716 TAESTWLEMISFNIHP 731
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YTAL+ Y + AE + + N+ N Y M+ Y +G +EK ++ ++K
Sbjct: 701 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 760
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+VPD+ TYN+ + ++D K D+M+ + G D + Y LV+
Sbjct: 761 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE-GLPVDEITYTTLVH 811
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+H E A+ L + +++ N + Y ++ Y +GQ++ E+
Sbjct: 665 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 724
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
N+ P+ FTY + I N+++ L +M +SG D V Y L N + A+
Sbjct: 725 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK-ESGIVPDVVTYNVLTNGFCKAND 783
Query: 146 LVNA 149
+ NA
Sbjct: 784 MDNA 787
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 80/223 (35%), Gaps = 38/223 (17%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY ++ Y A E E LF + + N+++YN ++ + G V ++E
Sbjct: 594 HTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLEN 653
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K K ++P+ TY+ I ++ K +DEM + +V V
Sbjct: 654 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR-----KEGFVPNV---------- 698
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ Y LI Y LG D + W + Y
Sbjct: 699 ----------------------VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTY 736
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 247
++ Y LG++++ ++ + K+S D+ N L F
Sbjct: 737 TVMIDGYCKLGNMEKANNLLIKMKESGIVP-DVVTYNVLTNGF 778
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++T +++ E A ELF ++++ +S N + YN ++ G+++ + E++
Sbjct: 245 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 304
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V P++ TY I+ D+V LDEM SG + + V + NL++ Y +
Sbjct: 305 TVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEM-IGSGFNPNVVVFNNLIDGYCKMGN 363
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ A V K+IT Y L G D+I+ +L
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYS----LMQGFCKSDQIEHAENAL 406
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 18/197 (9%)
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ RK P + T N +SS ++ + MS G D + N++N
Sbjct: 200 LARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS--EGACPDVFSFTNVINALCKGG 257
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 203
+ NA ++ EK +TY+ +I GL ++D ++ K+KMT +
Sbjct: 258 KMENA-IELFMKMEKLGISPNVVTYNCII---NGLCQNGRLDNAFE----LKEKMTVKGV 309
Query: 204 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
Y +++ + L +V ++D+ S + ++ N L+ + +G E A
Sbjct: 310 QPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNP-NVVVFNNLIDGYCKMGNIEGAL 368
Query: 258 EFHMLLLQKNCAPTNAS 274
+ +++ KN PT+ +
Sbjct: 369 KIKDVMISKNITPTSVT 385
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 9/191 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y ALL + + ++F+ + L +A + + Y G V V++ +
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++VP+++T+N I + +D LDEM D W N + Y
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT--YNSIMAYHCDHC 362
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN + L +++ TY+ ++ L +G D+ +IW+ M+ R +
Sbjct: 363 EVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG-------MSERKFY 415
Query: 206 CILSSYLMLGH 216
+++Y ++ H
Sbjct: 416 PTVATYTVMIH 426
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ TYT+L++ ++ ++ + LF+ + + + +MYN ++ + + G +E+ ++
Sbjct: 323 TAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIM 382
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS----------CDSGGSDD 129
E+++K + PD TYN I +D+ + +DEM+ C +G DD
Sbjct: 383 AEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLCKNGQGDD 439
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 3/220 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A ++ Y AL+ Y + A + E + Q ++ YN ++ G+
Sbjct: 216 APSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYA 275
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+EE++R + PD+FTYN+ I+ N + + +EMS G V Y +L+ +
Sbjct: 276 VLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMS-RKGVRATAVTYTSLIYAF 334
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ + V +K I + + Y+ LI + G+ ++ +I + +
Sbjct: 335 SRKGQVQETDRLFKVAVKKGI-RPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPD 393
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC 240
Y ++ + +LG L E +ID+ + D+ C
Sbjct: 394 DVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQP-DLGLC 432
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 115/293 (39%), Gaps = 43/293 (14%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
LPL T L HL A K +A EL ++ + N A+ YN ++ + + G+V+
Sbjct: 112 LPLCTTTFNIM--LRHLCATGKPV-RALELLRQMPRPN----AVTYNTVIAGFCARGRVQ 164
Query: 77 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 120
V+ E++ R + PD +TY IS ++ K DEM
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNA 224
Query: 121 ----SCDSGGSDDWVKY------------VNLVNIYITASHLVNAES---STLVEAEKSI 161
CD G D ++Y V N+ + A + S + L E +++
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNG 284
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
TY+ LI Y GN+ K ++++ + + T+ Y ++ ++ G ++E
Sbjct: 285 LSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETD 344
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+ + D+ N L+ + G E+A E + +K P + +
Sbjct: 345 RLFKVAVKKGIRP-DVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVT 396
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+TAL++ A EKAEE+FE+++++ + YN +M Y G A + +
Sbjct: 33 TFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLM 92
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD +YN+ + + + + +EM G + ++ L++ Y +A +
Sbjct: 93 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMK-RIGITPTMKSHMLLLSAYSSAGN 151
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ E + + KS + + ++ LY LG K++ ++ +++ + Y
Sbjct: 152 VAKCE-DIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYN 210
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+++ Y G ++ + E+ Q + + D+ +GA+S L ++ E ++
Sbjct: 211 ILINVYGRAGFVERMEELF-QLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMID 269
Query: 266 KNCAPTNASG 275
C P +
Sbjct: 270 AGCYPDGGTA 279
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 17/235 (7%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A+ +F+ ++ N + ++ G EK + E+++ PD++ YN +
Sbjct: 15 AQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALME 74
Query: 103 S---CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
S ++ + M C+ D Y +V+ Y A ++ ++ + E K
Sbjct: 75 SYSRAGFPYGAAEIFSLMQHMGCEP----DRASYNIMVDAYGRAG--LHEDAQAVFEEMK 128
Query: 160 SITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML-GHL 217
I + L++ Y+ GN K + I +M K + + +++S L L G L
Sbjct: 129 RIGITPTMKSHMLLLSAYSSAGNVAKCEDIIG--QMHKSGLKPDTF--VMNSMLNLYGRL 184
Query: 218 KEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ G++ D + Q DIS N L+ + G E+ E LL KN P
Sbjct: 185 GQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEP 239
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P A S TY L+++Y A + E+ EELF+ + NL + + + + Y ++
Sbjct: 201 PCRADIS-TYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKR 259
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
+ E++ PD T + +S+C++ I+QV + M D
Sbjct: 260 CLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 305
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T +++ LL Y+ A K E++ ++ +S L + + N M+ LY +GQ K+ +
Sbjct: 134 PTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDL 193
Query: 82 VEEIKRKNVVPDIFTYNLWIS 102
+++ DI TYN+ I+
Sbjct: 194 FSTMQKGPCRADISTYNILIN 214
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 16/254 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++ Y A + A F R+ L + +N ++ + + + V L+ + +
Sbjct: 173 FITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCR 232
Query: 87 RK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K +VP++FT N+ + + +ID + L+EM G + V Y ++ Y++
Sbjct: 233 KKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPA-MGFIPNVVTYTTILGGYVSKGD 291
Query: 146 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+V A V E I R W+ TY L+ Y G ++ + + +
Sbjct: 292 MVGARR---VFGE--ILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPND 346
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA--CNRLLGAFSDVGLTEKANEF 259
Y I+ +Y K+ GE+++ + S+ C R++ + G E A E
Sbjct: 347 VTYGVIIEAYC---KEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACEL 403
Query: 260 HMLLLQKNCAPTNA 273
LL+KNC P NA
Sbjct: 404 WKKLLKKNCTPDNA 417
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 9/191 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y ALL + + A ++F+ + L +A + + Y V V++ +
Sbjct: 245 AYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRM 304
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++VP+++T+N I + +D LDEM D W N + Y
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT--YNSIMAYHCDHC 362
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN + L +++ TY+ ++ L +G D++ +IW+ M+ R +
Sbjct: 363 EVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEG-------MSERKFY 415
Query: 206 CILSSYLMLGH 216
+++Y ++ H
Sbjct: 416 PTVATYTVMIH 426
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
LLH K A+E F++ K + +A Y+ ++ + + V +E+ N
Sbjct: 179 LLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENN 238
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
V D+ YN + + + ++D K EM + G D + ++ Y AS + +A
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGAYKMFQEMG-NLGLKPDAYSFAIFIHSYCDASDVHSA 297
>gi|294461912|gb|ADE76512.1| unknown [Picea sitchensis]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 37 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
K +A L + + +S + +YN +M Y + + + + +++ + PD+ T
Sbjct: 7 GKNMREARNLLDGMLESGCKPDGFLYNTLMKGYCKINKANEALEIYKKMDAEGCAPDVVT 66
Query: 97 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 156
+N I + +D+ KKFL M +G D + Y +L+N + A + L E
Sbjct: 67 FNTLIFGLSKVAKVDEAKKFLKLMV-RAGHPPDVITYTSLMNGMCRKGDAMGA-LALLEE 124
Query: 157 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK---MTSRNYICILSSYLM 213
++S+ Q TY+ L+ GL + Q K + K K + S Y L +
Sbjct: 125 MQQSVCQPDGCTYNTLM---HGLCMCQHLHQALKLYEVLKSKEVDLESGTYAAFLKALCR 181
Query: 214 LGHLKEVGEIID 225
G + E E+ D
Sbjct: 182 AGKVAEAYEVFD 193
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++++ + ++AE L ++ + +Y+ MM Y +G EK +V + +
Sbjct: 381 TYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL 440
Query: 86 KRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
K P + +Y NL+ I + L I ++ K SG + Y L+N
Sbjct: 441 KECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKM-------SGIKHNMKTYSMLING 493
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
++ NA S + K + + Y+ +I + G+ N D+ + K ++ + +
Sbjct: 494 FLKLKDWANA-FSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRP 552
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
T+R ++ I+ + G ++ EI D ++S
Sbjct: 553 TTRTFLPIIHGFARAGEMRRALEIFDMMRRSG 584
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ YA TEKA + F ++ L + Y ++ G+++ V +E+
Sbjct: 626 TYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEM 685
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KN+ + F YN+ I A ++ + + +M G D Y + VN A
Sbjct: 686 SAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMR-KEGVLPDIHTYTSFVNACCKAGD 744
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + + E E + TY LI +A +K ++ +++ + K Y
Sbjct: 745 MQKA-TEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYH 803
Query: 206 CILSSYL 212
C+++S L
Sbjct: 804 CLMTSLL 810
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 108/255 (42%), Gaps = 11/255 (4%)
Query: 7 IHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+H + FE + +S Y++L+H YA + E+A ++K+ + + Y+
Sbjct: 290 MHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSI 349
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ + +G+ + +E K K + TY I + T N+D+ + + EM
Sbjct: 350 IVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQ- 408
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLV---EAEKSITQRQWITYDFLIILYAGLGN 181
G D +++ + + ++ E L+ ++ I+Y LI LY +G
Sbjct: 409 -GID---APIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGK 464
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
K QI K ++M+ K + Y +++ +L L + + + + D+ N
Sbjct: 465 VSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKP-DVVLYN 523
Query: 242 RLLGAFSDVGLTEKA 256
++ AF + ++A
Sbjct: 524 NIITAFCGMSNMDRA 538
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 9/229 (3%)
Query: 31 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV 90
L+ Y E+AE + + V++S +S + YN M+T Y +K A +VE+++ +++
Sbjct: 158 LNTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDL 217
Query: 91 VPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLV 147
VPD TY+ I +C + + + EM S+ + L+++Y A V
Sbjct: 218 VPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSN----FNTLISLYGKAKD-V 272
Query: 148 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 207
+ E +K + W T D + Y G + +I LR + +Y +
Sbjct: 273 EGIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTL 332
Query: 208 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
L YL KE I +++ + + C L+ F D + + A
Sbjct: 333 LHVYLKCNLPKEALRIFLAMRKAGMAPKEY-MCRSLICTFRDAEMFDGA 380
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ +L LY + +AE +F + S + + Y+ M+ LY G EK +V E+
Sbjct: 84 TYSMMLLLYQRHRKVAEAESVFSHMLNSGVQ-AVVAYSVMIALYNREGLFEKSEQIVTEM 142
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R NV PD + +++ I++ ++ +D + +SG S V Y +++ Y A
Sbjct: 143 RRNNVTPDRDNWLKQLNTYGQQGKIEEAERIMDTVE-ESGMSLGLVGYNSMITAYGKAC- 200
Query: 146 LVNAESSTLVEA--EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ +++ LVE E+ + ITY +I +G + + ++ + K S N
Sbjct: 201 -LYDKAARLVEKMREEDLVPDS-ITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSN 258
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ ++S Y ++ + +I + K+ D + + A+ GL + E LL
Sbjct: 259 FNTLISLYGKAKDVEGIVRVITEMKKYGCKP-DWQTLDAAVRAYDRAGLIKDVTEILNLL 317
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E Y ++L Y A EK ++ R++ S + + YN ++ Y + ++ +
Sbjct: 606 EAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRT 665
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + VVPD +TYN I + D+ + M D+G S D V Y+ LV+ + A
Sbjct: 666 MQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQ-DAGISPDRVTYMILVSTFERAG 724
Query: 145 HLVNA 149
++ A
Sbjct: 725 NIDEA 729
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+++ L+H YA + E ++ + + YN ++ Y GQ+EKV+ V+ +
Sbjct: 572 SFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARM 631
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + D+ +YN+ I++ I +++ M + D W Y ++ Y A +
Sbjct: 632 ENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRWT-YNTIIRTYGFADY 690
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A + I+ + +TY L+ + GN D+ + W LRM++ T
Sbjct: 691 PDRAVYWFKAMQDAGISPDR-VTYMILVSTFERAGNIDEAAR-W-CLRMSQAGYT 742
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ Y A +KA L E++++ +L +++ Y+ M+ VG++++ E+K
Sbjct: 189 YNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMK 248
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R + P +N IS +++ + + + EM G DW V Y A +
Sbjct: 249 RLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMK-KYGCKPDWQTLDAAVRAYDRAGLI 307
Query: 147 VNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ + E + W+ +Y L+ +Y + +I+ L M K M +
Sbjct: 308 KD-----VTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIF--LAMRKAGMAPK 360
Query: 203 NYIC 206
Y+C
Sbjct: 361 EYMC 364
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E+ ++++Y ++AE LF ++ S + YN M+ +YM E V +
Sbjct: 397 ESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKL 456
Query: 85 IKRKNVVPDIFTYNLWISSC 104
++ +++PD +TY+ + C
Sbjct: 457 MEEDHLLPDAYTYHSMLRMC 476
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 105/247 (42%), Gaps = 3/247 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY+ ++ ++A F +K+ + + +N +++LY VE + V+
Sbjct: 221 SITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVIT 280
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+K+ PD T + + + I V + L+ + D+G ++ Y L+++Y+
Sbjct: 281 EMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLR-DAGWVEETGSYGTLLHVYLKC 339
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A L + + ++++ LI + D ++K +++ + +
Sbjct: 340 NLPKEALRIFLAMRKAGMAPKEYMCRS-LICTFRDAEMFDGAKSVFKEMQVAGVTPSLES 398
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
++ Y M G +KE + + S+ DI A N ++ + + E A + + L+
Sbjct: 399 SCTMIYVYGMNGDVKEAEGLFHSLR-SSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLM 457
Query: 264 LQKNCAP 270
+ + P
Sbjct: 458 EEDHLLP 464
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 4/226 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEI 85
++AL+ Y + + ++A ++FE +K S L N + YN ++ G + ++V + EE+
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R V PD TYN ++ C+ + + +EM D G D Y L++
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEM-IDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L K I +TY + YA G + ++ ++ + +Y
Sbjct: 344 MDLAYEIMLEMPGKKILP-NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYN 402
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+LS Y LG ++ ++ + S D+ N LL + G
Sbjct: 403 TLLSIYAKLGRFEDALKVCKEMGSSGVKK-DVVTYNALLDGYGKQG 447
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+T+VF +R F L TY+ L+ +Y+ E+A E+F KQ+ L + +
Sbjct: 452 VTRVFKEMKKDRVFPNL-------LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVV 504
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
+Y+E++ G V+ L+++E+ ++ + P++ TYN I +
Sbjct: 505 LYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDA 547
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL + + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++P++ TY+ A ++ +EM G D V Y L++IY
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR-VSYNTLLSIYAKLGR 413
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+A E S ++ +TY+ L+ Y G +++ +++K ++ + Y
Sbjct: 414 FEDA-LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYS 472
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ Y +E E+ ++KQ+ D+ + L+ A GL + A
Sbjct: 473 TLIDVYSKGSLYEEAMEVFREFKQAGLKA-DVVLYSELINALCKNGLVDSA 522
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL Y + +F+ +K+ + N L Y+ ++ +Y E+ V E
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + D+ Y+ I++ +D LDEM+ G + V Y ++++ + ++
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMT-KEGIRPNVVTYNSIIDAFGRST- 552
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLII 174
+ LV+ + +RQ + F++I
Sbjct: 553 ----TAEFLVDGVGASNERQSESPSFMLI 577
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 110/246 (44%), Gaps = 5/246 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++H A+ +KA+ + ++ + + + + YN ++ Y ++GQ ++ + +E+
Sbjct: 248 TYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEM 307
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V+P+ T + +++ I++ ++F D M G + + Y L++ Y TA
Sbjct: 308 TSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM-LAKGHKLNIISYSTLLHGYATAGC 366
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + + I Q + ++ L+ YA G + I++ ++ Y+
Sbjct: 367 LVDMSNLFNLMVRDGIVPNQHV-FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYL 425
Query: 206 CILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ ++ +G + + + + + +F + C L+ F G KA E +
Sbjct: 426 AVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC--LIQGFCTHGDLVKAEELVYEIR 483
Query: 265 QKNCAP 270
K P
Sbjct: 484 NKGLGP 489
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 104/244 (42%), Gaps = 9/244 (3%)
Query: 11 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
+R + PL+ T LH+ AK +AE LF +++ N YN M+ +Y
Sbjct: 167 KRGYSPGPLACNT------FLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
G+ K ++ ++R P+I T+ +++ A + +++ D++ + D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQ-EFDYKPDH 279
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
Y L+ Y A +++ ++++ LI Y G + ++I+K
Sbjct: 280 YAYNALMEAYSQGGSPAGA-LEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFK 338
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
S++ ++ + +LS+Y G ++E E++ ++ T D N L+ A+
Sbjct: 339 SMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP-DTLIYNSLINAYGVS 397
Query: 251 GLTE 254
G E
Sbjct: 398 GRHE 401
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 102/247 (41%), Gaps = 8/247 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+TAL++ +A +AE F+++++ + + YN +M Y G + + +
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R PD ++N+ I++ + +K M +G S + + L++ Y A
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQ-SAGFSPNLKSNMLLLSAYARAGR 364
Query: 146 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 203
+ AE LV A E+ T+ + Y+ LI Y G + ++ + + + K T +
Sbjct: 365 VEEAEE--LVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDI 422
Query: 204 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y ++ Y G + E+ + D + L+G ++ L K
Sbjct: 423 GTYNTLIQVYAQAGFIPRAEELFQGLARLKLVP-DATTWTALMGGYAKKKLYRKCTSILK 481
Query: 262 LLLQKNC 268
+L+ C
Sbjct: 482 KMLESGC 488
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY ++ +Y A KAE L+ ++++ N + +M + G + ++
Sbjct: 210 DTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 85 IKRKNVVPDIFTYNLWI------SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ + PD + YN + S A L I Q + +G D V + L+N
Sbjct: 270 LQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQ-------RNGCFPDTVSHNILIN 322
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQ 197
Y A +AE + ++ +S + + L++ YA G ++ +++ ++
Sbjct: 323 AYGRAGLYEDAEK--IFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGT 380
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEK 255
K + Y ++++Y + G +++ ++ + +S++ + DI N L+ ++ G +
Sbjct: 381 KPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPR 440
Query: 256 ANEFHMLLLQKNCAP 270
A E L + P
Sbjct: 441 AEELFQGLARLKLVP 455
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +YA A + +AEELF+ + + L +A + +M Y K +++++
Sbjct: 424 TYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKM 483
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
D T + S+C + ++QV + ++ +
Sbjct: 484 LESGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 78/217 (35%), Gaps = 36/217 (16%)
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 151
PD+ YNL I + +LNI+ +K + M ++ + + L+N Y A AE
Sbjct: 102 PDLGCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEE 160
Query: 152 ----------------------------------STLVEAEKSITQRQWITYDFLIILYA 177
+ + EK + TY+ +I++Y
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
G K + +++S+R + +++++ G +E D+ Q D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKL-QEFDYKPDH 279
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
A N L+ A+S G A E + + C P S
Sbjct: 280 YAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVS 316
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 4/226 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG-QVEKVALVVEEI 85
++AL+ Y + + ++A ++FE +K S L N + YN ++ G + ++V + EE+
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEM 284
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R V PD TYN ++ C+ + + +EM D G D Y L++
Sbjct: 285 LRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEM-IDRGIDQDVFTYNTLLDAVCKGGQ 343
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L K I +TY + YA G + ++ ++ + +Y
Sbjct: 344 MDLAYEIMLEMPGKKILP-NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYN 402
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+LS Y LG ++ ++ + S D+ N LL + G
Sbjct: 403 TLLSIYAKLGRFEDALKVCKEMGSSGVKK-DVVTYNALLDGYGKQG 447
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+T+VF +R F L TY+ L+ +Y+ E+A E+F KQ+ L + +
Sbjct: 452 VTRVFKEMKKDRVFPNL-------LTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVV 504
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
+Y+E++ G V+ L+++E+ ++ + P++ TYN I +
Sbjct: 505 LYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDA 547
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 3/231 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL + + E A LF + + + YN ++ GQ++ ++ E+
Sbjct: 295 TYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEM 354
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++P++ TY+ A ++ +EM G D V Y L++IY
Sbjct: 355 PGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDR-VSYNTLLSIYAKLGR 413
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+A E S ++ +TY+ L+ Y G +++ +++K ++ + Y
Sbjct: 414 FEDA-LKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYS 472
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ Y +E E+ ++KQ+ D+ + L+ A GL + A
Sbjct: 473 TLIDVYSKGSLYEEAMEVFREFKQAGLKA-DVVLYSELINALCKNGLVDSA 522
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL Y + +F+ +K+ + N L Y+ ++ +Y E+ V E
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF 494
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + D+ Y+ I++ +D LDEM+ + G + V Y ++++ + ++
Sbjct: 495 KQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKE-GIRPNVVTYNSIIDAFGRST- 552
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLII 174
+ LV+ + +RQ + F++I
Sbjct: 553 ----TAEFLVDGVGASNERQSESPTFMLI 577
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 105/243 (43%), Gaps = 2/243 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+Y LL+ + AK K E LF + + ++ N YN ++ + + EK ++
Sbjct: 115 RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ ++ PD+F+Y+ I+ A +D + DEMS + G + D Y L++ ++
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS-ERGVAPDVTCYNILIDGFLKEK 233
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
A E S T++ +I + G D +IW+ ++ +++ Y
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ G++ + + ++ + S D+ N +LG F G +++ E ++
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKAS-IDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 265 QKN 267
KN
Sbjct: 353 HKN 355
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 2/211 (0%)
Query: 13 YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 72
YFE + A +TY L+ + K EKA + + + + Y+ ++
Sbjct: 139 YFETAGV-APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKA 197
Query: 73 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 132
G+++ + +E+ + V PD+ YN+ I + + D + DS + VK
Sbjct: 198 GKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN-VK 256
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
N++ ++ V+ +++ ++ TY LI GN DK + ++ L
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
K + Y +L + G +KE E+
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLEL 347
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+H A +KAE +F + + S + + YN M+ + G++++ + +
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQ 112
+ KN V +I +YN+ I ID+
Sbjct: 352 EHKNSV-NIVSYNILIKGLLENGKIDE 377
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 110/257 (42%), Gaps = 18/257 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ + ++A +LFE + + YN M+ G++E + +++
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 86 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
R+ ++ PD+FTY+ I+ + ++ + +EM D+G S D V Y L++ +
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM-LDTGCSPDVVTYNTLLDGLCKSG 360
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 203
A ++ ITY LI + K+D++ ++++ K+ M R+
Sbjct: 361 CEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFC------KVDRLGDAVKLAKE-MEGRSL 413
Query: 204 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
+ ++ + E E+ + ++ D + N +L + + + A
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLF--NTMLAGYCKITRIDDAK 471
Query: 258 EFHMLLLQKNCAPTNAS 274
+ H +L CAPT A+
Sbjct: 472 KLHDRMLDSGCAPTLAT 488
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 12/243 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+ +A AK E+A +L E +++ N + YN ++ + V VV+++
Sbjct: 181 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 240
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P++ T+N + N+D +K L M G + V Y L++ +
Sbjct: 241 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVA-KGMRPNVVTYSALIDGLCKSQK 299
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
+ A+ L E + TY LI GL DKI++ + LR + +
Sbjct: 300 FLEAK-EVLEEMKTRGVTPDAFTYSALI---HGLCKADKIEEAEQMLRRMAGSGCTPDVV 355
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y I+ ++ G L E + + + ++ S D+ N ++ +G K E ++
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP-DVVTYNTVIDGLCKLG---KIAEAQVI 411
Query: 263 LLQ 265
L Q
Sbjct: 412 LEQ 414
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 90/206 (43%), Gaps = 1/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+H A E+AE++ R+ S + + ++Y+ ++ + G++ + ++E+
Sbjct: 321 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ PD+ TYN I I + + L++M D V Y ++N +
Sbjct: 381 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDM 440
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV A+ L K+ +TY +I G ++ + + + ++ Y
Sbjct: 441 LVEAQ-KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++S + E ++++ + +
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAG 525
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ E+AE L + +K++ + N + Y +++ +V++ V+EE+
Sbjct: 462 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG--SDDWVKYVNLVNIYITA 143
+ P++ TYN ++ + I + ++ + M D S D Y +VN ++
Sbjct: 522 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK-DGRAECSPDAATYRTIVNALMS- 579
Query: 144 SHLVNAESSTLVEAEKSITQRQ 165
S LV E+ L+E KS T Q
Sbjct: 580 SDLVQ-EAEQLLEQMKSTTSSQ 600
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+P + T+ ++ +LL + K +A +LF ++ + YN +++ + + G +
Sbjct: 70 IPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLH 129
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
++EE+K PD FT+ I++ A ++D L M CD + V Y L
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDP----NVVTYTAL 185
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
+ + A L A L E + +TY+ L+
Sbjct: 186 IAAFARAKKLEEA-MKLLEEMRERGCPPNLVTYNVLV 221
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P S TS AL+H GA +A + + + + L + + YN ++ + + G+
Sbjct: 459 KGSPASKVTS---NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 515
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
VE + EE+ ++ + PDI+TYN + +D K DE SG + Y
Sbjct: 516 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKA-SGLISNIHTYG 574
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
++ Y A+ + + E + E + I Y+ +I + GN Q+ ++++
Sbjct: 575 IMMEGYCKANRIEDVE-NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 633
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
Y ++ +G +++ +ID+ ++ ++ L+G + +G +
Sbjct: 634 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVP-NVVCYTALIGGYCKLGQMD 692
Query: 255 KANEFHMLLLQKNCAP 270
A + ++ N P
Sbjct: 693 TAESTWLEMISFNIHP 708
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YTAL+ Y + AE + + N+ N Y M+ Y +G +EK ++ ++K
Sbjct: 678 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 737
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+VPD+ TYN+ + ++D K D+M+ + G D + Y LV+
Sbjct: 738 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE-GLPVDEITYTTLVH 788
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+H E A+ L + +++ N + Y ++ Y +GQ++ E+
Sbjct: 642 TYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEM 701
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
N+ P+ FTY + I N+++ L +M +SG D V Y L N + A+
Sbjct: 702 ISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK-ESGIVPDVVTYNVLTNGFCKAND 760
Query: 146 LVNA 149
+ NA
Sbjct: 761 MDNA 764
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 80/223 (35%), Gaps = 38/223 (17%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY ++ Y A E E LF + + N+++YN ++ + G V ++E
Sbjct: 571 HTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLEN 630
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K K ++P+ TY+ I ++ K +DEM + +V V
Sbjct: 631 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR-----KEGFVPNV---------- 675
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ Y LI Y LG D + W + Y
Sbjct: 676 ----------------------VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTY 713
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 247
++ Y LG++++ ++ + K+S D+ N L F
Sbjct: 714 TVMIDGYCKLGNMEKANNLLIKMKESGIVP-DVVTYNVLTNGF 755
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++T +++ E A ELF ++++ +S N + YN ++ G+++ + E++
Sbjct: 222 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 281
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V P++ TY I+ D+V LDEM +G + + V + NL++ Y +
Sbjct: 282 TVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEM-IGAGFNPNVVVFNNLIDGYCKMGN 340
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ A V K+IT Y L G D+I+ +L
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYS----LMQGFCKSDQIEHAENAL 383
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 18/197 (9%)
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ RK P + T N +SS ++ + MS G D + N++N
Sbjct: 177 LARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMS--EGACPDVFSFTNVINALCKGG 234
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 203
+ NA ++ EK +TY+ +I GL ++D ++ K+KMT +
Sbjct: 235 KMENA-IELFMKMEKLGISPNVVTYNCII---NGLCQNGRLDNAFE----LKEKMTVKGV 286
Query: 204 ------YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
Y +++ + L +V I+D+ A + ++ N L+ + +G E A
Sbjct: 287 QPNLKTYGALINGLIKLNFFDKVNHILDEM-IGAGFNPNVVVFNNLIDGYCKMGNIEGAL 345
Query: 258 EFHMLLLQKNCAPTNAS 274
+ +++ KN PT+ +
Sbjct: 346 KIKDVMISKNITPTSVT 362
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y +LL + +A ++F + + + +A ++ + Y + V++E+
Sbjct: 250 AYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEM 309
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++VP++FTYN I +++ + L+E+ SG D W N + Y
Sbjct: 310 KRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWS--YNAILAYHCEHS 367
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
VN+ + + K +Y+ L+ L +G D+ ++W+S+
Sbjct: 368 EVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESM 414
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 49/97 (50%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++TY+ L+ + + A ++F+ +++ + + L YN ++ + G+V + +
Sbjct: 213 AKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFR 272
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
E+ + PD T++++I + +I + LDEM
Sbjct: 273 EMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEM 309
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 2/199 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ A E A LFE +K L + + YN ++ Y VG + V EE+
Sbjct: 253 TYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM 312
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K PD+ TYN I+ I Q ++L M G + V Y L++ + A
Sbjct: 313 KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMK-QRGLQPNVVTYSTLIDAFCKAGM 371
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L+ A + V+ + Q TY LI +G+ ++ ++ ++ + Y
Sbjct: 372 LLEA-NKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYT 430
Query: 206 CILSSYLMLGHLKEVGEII 224
+L G ++E E+
Sbjct: 431 ALLDGLCEDGRMREAEELF 449
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 13/241 (5%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
LLH + + A F+ + + LS + YN ++ G +E + EE+K K
Sbjct: 222 LLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG 281
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
+ PDI TYN I + +EM D+G D + Y +L+N + + A
Sbjct: 282 LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMK-DAGCEPDVITYNSLINCFCKFERIPQA 340
Query: 150 ESSTLVEAEKSITQRQWITYDFLIILYAGLG-----NKDKIDQIWKSLRMTKQKMTSRNY 204
++ + Q +TY LI + G NK +D I L+ + TS
Sbjct: 341 FEYLHGMKQRGL-QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS--- 396
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ + +G L E ++ + +Q+ + +I LL + G +A E LL
Sbjct: 397 --LIDANCKIGDLNEAFKLESEMQQAGV-NLNIVTYTALLDGLCEDGRMREAEELFGALL 453
Query: 265 Q 265
+
Sbjct: 454 K 454
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTALL +AEELF + ++ + N +Y + Y+ +EK ++EE+
Sbjct: 428 TYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+KN+ PD+ Y I I+ + EM D G + + Y L++ Y
Sbjct: 488 NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM-DCGLTANSYIYTTLIDAYFKVGK 546
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
A + L E + + +TY LI
Sbjct: 547 TTEA-VNLLQEMQDLGIKITVVTYGVLI 573
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 96/246 (39%), Gaps = 16/246 (6%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S YT L+ Y T +A L + ++ + + Y ++ +G V++ +
Sbjct: 531 SYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFD 590
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ R + P+I Y I +++ K +EM D G S D + Y +L++
Sbjct: 591 HMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEM-LDKGISPDKLVYTSLID--GNM 647
Query: 144 SHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGN----KDKIDQIWKSLRMTKQK 198
H E+ +L I + Y LI ++ G K +D++ + + Q
Sbjct: 648 KHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV 707
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQ----SATSDFDISACNRLLGAFSDVGLTE 254
+ IC+L Y LG + E + D + S T D + +C + + ++
Sbjct: 708 LC----ICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQ 763
Query: 255 KANEFH 260
+FH
Sbjct: 764 SGTDFH 769
>gi|125535459|gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indica Group]
Length = 697
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-----PDIFTYNLWISSCAATLNIDQ 112
N+ +Y +M YM+ G+VE V ++ ++R+ PD TY IS+ A ++++
Sbjct: 350 NSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMER 409
Query: 113 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 172
+ L+EM +G + V Y L+ Y A+ V+ ++ Q +TY+ L
Sbjct: 410 ARAVLEEMG-QAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTL 468
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
I + ++ +R ++ +Y ++ ++ G K ++ D+ ++
Sbjct: 469 IDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPR 528
Query: 233 SDFDISACNRLLGAFSDVGLTEKANE 258
D +A N L+ A+ +GL E A +
Sbjct: 529 VAVDRAAWNMLVEAYCRLGLLESAKK 554
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 102/272 (37%), Gaps = 21/272 (7%)
Query: 11 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
R E P S TYT ++ A E+A + E + Q+ ++ + + YN ++ Y
Sbjct: 378 RREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYC 437
Query: 71 SVGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
Q K L+ ++ + PD+ TYN I C T + +EM + G +
Sbjct: 438 QQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMR-ERGIAPS 496
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEK----SITQRQWITYDFLIILYAGLGNKDKI 185
V Y L+ + AS E EK ++ + W + L+ Y LG
Sbjct: 497 AVSYTTLMKAF-AASGQPKLAHKVFDEMEKDPRVAVDRAAW---NMLVEAYCRLG----- 547
Query: 186 DQIWKSLRMTKQKMTSRNYICILSSYLMLGH----LKEVGEIIDQWKQSATSDFDISACN 241
+ +S + ++M +R +++Y L + GE + W++ + D
Sbjct: 548 --LLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDGEVVE 605
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 273
L L KA E + + P A
Sbjct: 606 ALADVCVRAALFRKALEMVARMEEMGVEPNKA 637
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 11/222 (4%)
Query: 17 LPLSAKT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA-----LMYNEMMT 67
+PL K S YT L+ Y A E + +++ + A + Y +++
Sbjct: 340 VPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVIS 399
Query: 68 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 127
++ G +E+ V+EE+ + V TYN+ I L + K+ L ++G
Sbjct: 400 TLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQ 459
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
D V Y L++ + A + E+ I ++Y L+ +A G +
Sbjct: 460 PDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAP-SAVSYTTLMKAFAASGQPKLAHK 518
Query: 188 IWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWK 228
++ + + R + ++ +Y LG L+ +++++ K
Sbjct: 519 VFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMK 560
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ ++ ++AE +F+ + + +A+ YN ++ + G VE+V V EE+
Sbjct: 103 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 162
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ D TYN I +D DEM G + D V Y LV+
Sbjct: 163 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 221
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L E + + +T+ LI YA G +D ++ + + + K Y+
Sbjct: 222 ISEA-GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYL 280
Query: 206 CILSSY 211
+L +
Sbjct: 281 VMLDVF 286
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A EL V+Q+ L +A+ YN +++ ++ V EE+ PD++TYN +S
Sbjct: 50 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 109
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
+ + E+ + G D V Y +L+ + + E E K+
Sbjct: 110 VHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE-RVCEELVKAGF 167
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
++ ITY+ +I +Y +G D ++ +R + Y ++ S + + E G+
Sbjct: 168 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 227
Query: 223 IIDQ 226
++++
Sbjct: 228 VLEE 231
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + + A +FE + S + YN M++++ G+ ++ L+ +E+
Sbjct: 68 TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL 127
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K PD TYN + + A ++++V++ +E+ +G D + Y ++++Y
Sbjct: 128 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL-VKAGFRKDGITYNTMIHMYGKMGR 186
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
L A L + ++I +TY +L LG D+I + K L
Sbjct: 187 LDLALG--LYDEMRAIGCTPDAVTY---TVLVDSLGKMDRISEAGKVL 229
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++H+Y + A L++ ++ + +A+ Y ++ + ++ + V+EE+
Sbjct: 173 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 232
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P + T++ I + A + D ++ D M +SG D + Y+ +++++ +
Sbjct: 233 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM-VESGVKPDRLAYLVMLDVFARSD- 290
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQI 188
E+ L+ +++ + + D L +L A L ++ D+I
Sbjct: 291 ----ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 330
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++AL+ YA + + AE F+R+ +S + + L Y M+ ++ + K+ ++ +
Sbjct: 243 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAM 302
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD Y + +++ A D+++ + +M V +N + +S
Sbjct: 303 IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA-----------VFEMNPLVISSI 351
Query: 146 LVNAE 150
L+ AE
Sbjct: 352 LIKAE 356
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+Y+ +L +++A +LF+ + + S N + YN ++ + G+ K +
Sbjct: 230 SYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFH 289
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ R+ V PD+ TYNL I + +D+ + L +M+ + G D V Y +++ Y T
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTN-GAQPDTVTYNCMIHGYATL 348
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L A + + I FL L G + +I+ S+ K +
Sbjct: 349 GRLKEAAKMFRKMKSRGLIPNIVICNSFLASL-CKHGRSKEAAEIFDSMTAKGHKPDIVS 407
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y +L Y G ++ + + K + + D N L+ A++ G+ + A +
Sbjct: 408 YCTLLHGYASEGWFADMIGLFNSMKSNGIAA-DCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 264 LQKNCAP 270
Q+ +P
Sbjct: 467 QQQGVSP 473
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LLH YA W LF +K + ++ + ++N ++ Y G V+ L+ E+
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 86 KRKNVVPDIFTYNLWISSCAATLNI-DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+++ V PD+ TY+ IS+ + + D ++KF ++ G + Y +++ +
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA--RGIQPNTAVYHSIIQGFCMHG 524
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
LV A+ K I + + ++ +I G I+ + ++ +
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITF 584
Query: 205 ICILSSYLMLGHLKEVGEIIDQWK 228
++ Y ++G + + +I+D +
Sbjct: 585 TSLIDGYCLVGKMDKAFKILDAME 608
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ Y + A LF+ +K + + +Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
KR P ++TY I +D+ F +M D G + D V NL+NI
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNI 347
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 109/282 (38%), Gaps = 39/282 (13%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY-------------------- 62
T + YT LL +Y EKA +LFE +K++ S Y
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 63 ---------------NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AA 106
N +M + VG+VE++ V E+ P + +YN I + +
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 107 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 166
++ +V + D+M DS ++ Y L++ Y + + A L E ++
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFT-YSILIDGYCKTNRVEKA-LLLLEEMDEKGFPPCP 444
Query: 167 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
Y LI + D+++K L+ ++SR Y ++ + G L E ++ ++
Sbjct: 445 AAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 227 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
K + D+ A N L+ G+ +AN + + C
Sbjct: 505 MKNQGSGP-DVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P Y +L++ AK E A+ELF+ +K++ + ++ +Y M+ + G+
Sbjct: 438 KGFP---PCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ + + E+K + PD++ YN +S I++ L +M + +D +
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD-----I 549
Query: 135 NLVNIYIT--ASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
N NI + A V + + E K S + +TY+ L+ +A G ++ ++ +
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKE 219
++ + + Y IL + + H K+
Sbjct: 610 MKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-K 86
+ L+ AK KA +F + K + YN ++ + M GQ EKV V E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ PD TY+ ISS D + DEM + + + Y L+ IY +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-YTTLLGIYFKVGKV 284
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
A E +++ TY LI GLG ++D+ +
Sbjct: 285 EKA-LDLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVDEAY 323
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 104/244 (42%), Gaps = 9/244 (3%)
Query: 11 ERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM 70
+R + PL+ T LH+ AK +AE LF +++ N YN M+ +Y
Sbjct: 167 KRGYSPGPLACNT------FLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
G+ K ++ ++R P+I T+ +++ A + +++ D++ + D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQ-EFDYKPDH 279
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
Y L+ Y A +++ ++++ LI Y G + ++I+K
Sbjct: 280 YAYNALMEAYSQGGSPAGA-LEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFK 338
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
S++ ++ + +LS+Y G ++E E++ ++ T D N L+ A+
Sbjct: 339 SMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP-DTLIYNALINAYGVS 397
Query: 251 GLTE 254
G E
Sbjct: 398 GRHE 401
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+TAL++ +A +AE F+++++ + + YN +M Y G + + +
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R PD ++N+ I++ + +K M +G S + + L++ Y A
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQ-SAGFSPNLKSNMLLLSAYARAGR 364
Query: 146 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 203
+ AE LV A E+ T+ + Y+ LI Y G + ++ + + + K T +
Sbjct: 365 VEEAEE--LVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDI 422
Query: 204 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y ++ Y G + + E+ + D + L+G ++ L K
Sbjct: 423 GTYNTLIQVYAQAGFIPKAEELFQGLARLKLVP-DATTWTALMGGYAKKKLYRKCTSILK 481
Query: 262 LLLQKNC 268
+L+ C
Sbjct: 482 KMLESGC 488
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY ++ +Y A KAE L+ ++++ N + +M + G + ++
Sbjct: 210 DTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 85 IKRKNVVPDIFTYNLWI------SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ + PD + YN + S A L I Q + +G D V + L+N
Sbjct: 270 LQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQ-------RNGCFPDTVSHNILIN 322
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLII-LYAGLGNKDKIDQIWKSLRMTKQ 197
Y A +AE + ++ +S + + L++ YA G ++ +++ ++
Sbjct: 323 AYGRAGLYEDAEK--IFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGT 380
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEK 255
K + Y ++++Y + G +++ ++ + +S++ + DI N L+ ++ G K
Sbjct: 381 KPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPK 440
Query: 256 ANEFHMLLLQKNCAP 270
A E L + P
Sbjct: 441 AEELFQGLARLKLVP 455
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +YA A + KAEELF+ + + L +A + +M Y K +++++
Sbjct: 424 TYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKM 483
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
D T + S+C + ++QV + ++ +
Sbjct: 484 LESGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 78/217 (35%), Gaps = 36/217 (16%)
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 151
PD+ YNL I + +LNI+ +K + M ++ + + L+N Y A AE
Sbjct: 102 PDLGCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEE 160
Query: 152 ----------------------------------STLVEAEKSITQRQWITYDFLIILYA 177
+ + EK + TY+ +I++Y
Sbjct: 161 LFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYG 220
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
G K + +++S+R + +++++ G +E D+ Q D
Sbjct: 221 KAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKL-QEFDYKPDH 279
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
A N L+ A+S G A E + + C P S
Sbjct: 280 YAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVS 316
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ Y + A LF+ +K + + +Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
KR P ++TY I +D+ F +M D G + D V NL+NI
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNI 347
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 109/282 (38%), Gaps = 39/282 (13%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY-------------------- 62
T + YT LL +Y EKA +LFE +K++ S Y
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 63 ---------------NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC-AA 106
N +M + VG+VE++ V E+ P + +YN I + +
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 107 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 166
++ +V + D+M DS ++ Y L++ Y + + A L E ++
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFT-YSILIDGYCKTNRVEKA-LLLLEEMDEKGFPPCP 444
Query: 167 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
Y LI + ++++K L+ ++SR Y ++ + G L E ++ ++
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 227 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
K + D+ A N L+ G+ +AN + + C
Sbjct: 505 MKNQGSGP-DVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P Y +L++ AK E A ELF+ +K++ + ++ +Y M+ + G+
Sbjct: 438 KGFP---PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ + + E+K + PD++ YN +S I++ L +M + +D +
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD-----I 549
Query: 135 NLVNIYIT--ASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
N NI + A V + + E K S + +TY+ L+ +A G ++ ++ +
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKE 219
++ + + Y IL + + H K+
Sbjct: 610 MKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-K 86
+ L+ AK KA +F + K + YN ++ + M GQ EKV V E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ PD TY+ ISS D + DEM + + + Y L+ IY +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-YTTLLGIYFKVGKV 284
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
A E +++ TY LI GLG ++D+ +
Sbjct: 285 EKA-LDLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVDEAY 323
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEM 120
Y++++ +VEK + EE+KR +VP ++TY + I S C A L I Q +K+ DEM
Sbjct: 463 YSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL-IQQARKWFDEM 521
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAE---SSTLVEAEKSITQRQWITYDFLIILYA 177
G + + V Y L++ Y+ A + A+ L+E K +TY LI +
Sbjct: 522 -LHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKP----NVVTYTALIDGHC 576
Query: 178 GLGNKDKIDQIWKSLR 193
G +K QI+ +R
Sbjct: 577 KAGQIEKACQIYARMR 592
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 102/266 (38%), Gaps = 29/266 (10%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+H Y AK A+ELFE + N + Y ++ + GQ+EK + +
Sbjct: 532 TYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM 591
Query: 86 K---------------RKNVV-PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+ N P++ TY + + + + LD M G +
Sbjct: 592 RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLA-HGCEPN 650
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ Y +++ + L +A+ +E+ + + F+ L+ +++D +
Sbjct: 651 QIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF----KDNRLDLVL 706
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLL 244
K L + + N + M+ L ++G+ + +K + + ++ ++
Sbjct: 707 KVLSKMLENSCTPNVVIYTE---MVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMI 763
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAP 270
F G E+ E + K CAP
Sbjct: 764 DGFGKSGKIEQCLELFRDMCSKGCAP 789
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 47/94 (50%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ T++A +L ++++ + N + Y M+ + G++E+ + ++
Sbjct: 724 YTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMC 783
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K P+ TY + I+ C + +D+ K LDEM
Sbjct: 784 SKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S Y +++ L +AEE F + + + + ++Y ++ + G + +
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ +++ PD+ TY IS ++ + K EM C G D V + L+N Y A
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELINGYCKA 434
Query: 144 SHLVNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
H+ +A + +++A S +TY LI G+ D +++ + +
Sbjct: 435 GHMKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y I++ G+++E +++ ++ ++A + D L+ A+ G +KA E
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 262 LLLQKNCAPT 271
+L K PT
Sbjct: 551 EMLGKGLQPT 560
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 96/233 (41%), Gaps = 3/233 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ++H ++A L ++ + + + Y+ ++ Y G+++KV ++E +
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KRK + P+ + Y I + + ++ EM G D V Y L++ +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGD 366
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E +TY +I + +G+ + +++ + + S +
Sbjct: 367 -IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
+++ Y GH+K+ + + Q+ S ++ L+ G + ANE
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANE 477
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 11/272 (4%)
Query: 5 FGI-HSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
FG+ R FE GL LS + Y L L T A +F + + +N
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVY--LTRLSKDCYKTATAIIVFREFPEVGVCWN 245
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
YN ++ +G++++ ++ ++ K PD+ +Y+ ++ +D+V K ++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 119 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 178
M + ++ Y +++ + L AE + E + + Y LI +
Sbjct: 306 VMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEA-FSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
G+ + + + Y I+S + +G + E G++ + D
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP-DSV 422
Query: 239 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
L+ + G + A H ++Q C+P
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE L+A T TYT L+ Y + +KA+E+ + + L + +N +M + G
Sbjct: 517 FEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+E ++ + K + P+ T+N + N+ +M C G D Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM-CSRGVGPDGKTY 634
Query: 134 VNLVNIYITASHLVNA 149
NLV + A ++ A
Sbjct: 635 ENLVKGHCKARNMKEA 650
>gi|224069810|ref|XP_002303045.1| predicted protein [Populus trichocarpa]
gi|222844771|gb|EEE82318.1| predicted protein [Populus trichocarpa]
Length = 388
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ + K +KA +LF+ + + Y +++ Y G +K ++EE+K
Sbjct: 33 YVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAFSIMEEMK 92
Query: 87 R-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ TY++ I SC D+V+ L +M G + V Y +++ Y A
Sbjct: 93 NTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDME-SLGIRPNTVTYNTVIDAYGKAKM 151
Query: 146 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
E +TL+E +++ W T + I + G G + ++ ++ + + +
Sbjct: 152 FAEME-ATLMEMLSQQDCEPDVW-TMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKT 209
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ +L SY G+ +++ ++ ++ Q + I N ++ AF G ++ L+
Sbjct: 210 FNILLDSYGKAGNYQKMSAVM-EYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLM 268
Query: 264 LQKNCAPT 271
+ P+
Sbjct: 269 RSERIKPS 276
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 26 TYTALLHLYAGAK-WTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY ++ Y AK + E L E + Q + + N + + GQ+E + E+
Sbjct: 138 TYNTVIDAYGKAKMFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEK 197
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + P+I T+N+ + S N ++ ++ M S V Y +++ + A
Sbjct: 198 FQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQ-RYHYSWTIVTYNVVIDAFGRAG 256
Query: 145 HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L E L+ +E+ + +T L+ Y G +KI + + + + + +
Sbjct: 257 DLKQMEYLFRLMRSER--IKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVF 314
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ C++ +Y L E+ E+++ ++ D ++ A+S G+T A + LL
Sbjct: 315 FNCLVDAYGRLECFAEMKEVLELMEEKGCKP-DKVTYRTMIKAYSIKGMTSHAKKLRNLL 373
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
G EKA ++ + + + +A Y +++T +V+K L+ +E+K+ V PD+
Sbjct: 428 CGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDV 487
Query: 95 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 153
+TY + I S C A L I+Q + + DEM +G S + V Y L++ Y+ + L A +
Sbjct: 488 YTYTILIDSFCKAGL-IEQAQSWFDEMR-SAGCSPNVVTYTALLHAYLKSKQLYQA-NDI 544
Query: 154 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
ITY LI G K +++ L T + S Y
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYF 596
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 32/250 (12%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTALLH Y +K +A ++F R+ NA+ Y+ ++ G+++K V ++
Sbjct: 524 TYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKL 583
Query: 86 --KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
N+ D + + D + S + V Y LVN A
Sbjct: 584 IGTSDNIESDFYFEG---------KDTDTI-------------SPNVVTYGALVNGLCKA 621
Query: 144 SHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM--T 200
+ +A L++A + + I YD L+ + +G D +++ LRMTK +
Sbjct: 622 QKVSDAHD--LLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVF--LRMTKCGYLPS 677
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y ++ G L +++ Q + + + ++ ++ G TEKA
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNP-NVVTYTAMVDGLCKTGETEKALNLL 736
Query: 261 MLLLQKNCAP 270
L+ +K C+P
Sbjct: 737 SLMEKKGCSP 746
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AE+++E + ++ N + VG+ EK +V+E+ RK VPD TY I+
Sbjct: 401 AEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVIT 460
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 151
+D+ EM G + D Y L++ + A + A+S
Sbjct: 461 FLCQAKRVDKAFLLFQEMK-KVGVNPDVYTYTILIDSFCKAGLIEQAQS 508
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTA++ TEKA L +++ S N + Y ++ G+V+ + ++
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774
Query: 86 KRKNVVPDIFTYNLWISSCAAT 107
K K P+ TY + I+ C A
Sbjct: 775 KTKGCAPNYVTYRILINHCCAA 796
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +++ L +AEE F + + + ++Y ++ + G + +
Sbjct: 739 SYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFY 798
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ +++ PD+ TY IS ++ + K EM C G D + + L+N Y A
Sbjct: 799 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC-RGLEPDIITFTELMNGYCKA 857
Query: 144 SHLVNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
H+ +A + +++A S +TY LI G+ D +++ + +
Sbjct: 858 GHIKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 914
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y I++ G+++E +++ ++ ++A + D L+ A+ G +KA E
Sbjct: 915 FTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILT 973
Query: 262 LLLQKNCAPT 271
+L K PT
Sbjct: 974 EMLGKGLQPT 983
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 90/201 (44%), Gaps = 8/201 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L++ Y A + A + + Q+ S N + Y ++ G ++ ++ E+
Sbjct: 846 TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+IFTYN ++ + NI++ K + E +G + D V Y L++ Y +
Sbjct: 906 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDAYCKSGE 964
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI---ILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ A+ L E Q +T++ L+ L+ L + +K+ W + T+
Sbjct: 965 MDKAQ-EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN-WMLAKGIAPNATTF 1022
Query: 203 NYICILSSYLMLGHLKEVGEI 223
N C++ Y + +LK I
Sbjct: 1023 N--CLVKQYCIRNNLKAATAI 1041
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
GL LS + Y A L T A +F + + +N YN ++ +G++
Sbjct: 628 GLVLSVDSCNVYLA--RLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 685
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
+ ++ ++ K PD+ +Y+ I+ +D+V K +++M G + Y +
Sbjct: 686 NEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK-QKGLKPNSYTYGS 744
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
++ + L AE + + I I Y L+ + G+ + + +
Sbjct: 745 IIGLLCRICKLAEAEEAFSEMIGQGILPDT-IVYTTLVDGFCKRGDIRAASKFFYEMHSR 803
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
Y I+S + +G + E G++ + DI L+ + G +
Sbjct: 804 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEP-DIITFTELMNGYCKAGHIKD 862
Query: 256 ANEFHMLLLQKNCAP 270
A H ++Q C+P
Sbjct: 863 AFRVHNHMIQAGCSP 877
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/234 (17%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ++H +A L ++ + + + Y+ ++ Y G+++KV ++E++
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+K + P+ +TY I + + ++ EM G D + Y LV+ +
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEM-IGQGILPDTIVYTTLVDGFCKRGD 789
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E +TY +I + +G+ + +++ + + +
Sbjct: 790 -IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+++ Y GH+K+ + + Q+ S ++ L+ G + ANE
Sbjct: 849 ELMNGYCKAGHIKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANEL 901
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE L+A T TYT L+ Y + +KA+E+ + L + +N +M + G
Sbjct: 940 FEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+E ++ + K + P+ T+N + N+ +M C G D Y
Sbjct: 999 MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDM-CSRGVEPDGKTY 1057
Query: 134 VNLVNIYITASHLVNA 149
NLV + A ++ A
Sbjct: 1058 ENLVKGHCNARNMKEA 1073
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 9/260 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P SA Y A + T+KA E+FER+K+ + Y ++ LY +
Sbjct: 233 GFPPSAVV---YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKS 289
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V E++ + P+I T+ +++ A ++ ++ +++ ++G D Y
Sbjct: 290 YMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNA 348
Query: 136 LVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L+ Y A A E +L++ R +Y+ ++ Y G + +++ ++
Sbjct: 349 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGLHEDAQAVFEVMKR 406
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
T ++++ +LS+Y G + + EI++Q +S D N +L + +G E
Sbjct: 407 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFE 465
Query: 255 KANEFHMLLLQKNCAPTNAS 274
K E + ++K P + S
Sbjct: 466 KMEEV-LTAMEKGPYPADIS 484
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 61
T+TAL++ +A EKAEE+FE+++++ L ++NALM
Sbjct: 310 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 369
Query: 62 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
YN M+ Y G E V E +KR + P + ++ L +S+ + +
Sbjct: 370 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 429
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
+ ++ +++M SG D +++N+Y E L EK TY+
Sbjct: 430 AKCEEIVNQMH-KSGIKPDTFVLNSMLNLYGRLGQFEKME-EVLTAMEKGPYPADISTYN 487
Query: 171 FLIILYAGLGNKDKIDQIWKSL 192
LI +Y G +++++++SL
Sbjct: 488 ILINIYGRAGFFARMEELFRSL 509
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 38/248 (15%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ Y +KAE + + ++ Y ++ Y + G +EK V E++
Sbjct: 171 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 230
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P YN +I + + + + M D
Sbjct: 231 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDR---------------------- 268
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
Q TY LI LY +++ +R K K +
Sbjct: 269 ---------------CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTA 313
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+++++ G ++ EI +Q Q A + D+ A N L+ A+S G A E L+
Sbjct: 314 LVNAFAREGLCEKAEEIFEQL-QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 372
Query: 267 NCAPTNAS 274
C P AS
Sbjct: 373 GCEPDRAS 380
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T +++ LL Y+ A K EE+ ++ +S + + + N M+ LY +GQ EK+ V+
Sbjct: 412 TMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVL 471
Query: 83 EEIKRKNVVPDIFTYNLWIS 102
+++ DI TYN+ I+
Sbjct: 472 TAMEKGPYPADISTYNILIN 491
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P A S TY L+++Y A + + EELF + NL + + + + Y Q +
Sbjct: 478 PYPADIS-TYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNR 536
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
V EE+ PD T + +S+C+ I +V + M D
Sbjct: 537 CLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKD 582
>gi|115483719|ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
gi|77548314|gb|ABA91111.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa Japonica Group]
Length = 543
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 6/222 (2%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV-----PDIFTYNLWISSCAATLNIDQ 112
N+ +Y +M YM+ G+VE V ++ ++R+ PD TY IS+ A ++++
Sbjct: 196 NSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMER 255
Query: 113 VKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 172
+ L+EM +G + V Y L+ Y A+ V+ ++ Q +TY+ L
Sbjct: 256 ARAVLEEMG-QAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTL 314
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
I + ++ +R ++ +Y ++ ++ G K ++ D+ ++
Sbjct: 315 IDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPR 374
Query: 233 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
D +A N L+ A+ +GL E A + + + P A+
Sbjct: 375 VAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVAT 416
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 104/276 (37%), Gaps = 21/276 (7%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 66
+ + R E P S TYT ++ A E+A + E + Q+ ++ + + YN ++
Sbjct: 220 LRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQAGVAASRVTYNVLI 279
Query: 67 TLYMSVGQVEKVA-LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
Y Q K L+ ++ + PD+ TYN I C T + +EM + G
Sbjct: 280 KGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMR-ERG 338
Query: 126 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK----SITQRQWITYDFLIILYAGLGN 181
+ V Y L+ + AS E EK ++ + W + L+ Y LG
Sbjct: 339 IAPSAVSYTTLMKAF-AASGQPKLAHKVFDEMEKDPRVAVDRAAW---NMLVEAYCRLG- 393
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGH----LKEVGEIIDQWKQSATSDFDI 237
+ +S + ++M +R +++Y L + GE + W++ + D
Sbjct: 394 ------LLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVDG 447
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 273
L L KA E + + P A
Sbjct: 448 EVVEALADVCVRAALFRKALEMVARMEEMGVEPNKA 483
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 90/222 (40%), Gaps = 11/222 (4%)
Query: 17 LPLSAKT----SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA-----LMYNEMMT 67
+PL K S YT L+ Y A E + +++ + A + Y +++
Sbjct: 186 VPLLPKAYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVIS 245
Query: 68 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 127
++ G +E+ V+EE+ + V TYN+ I L + K+ L ++G
Sbjct: 246 TLVAAGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQ 305
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
D V Y L++ + A + E+ I ++Y L+ +A G +
Sbjct: 306 PDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAP-SAVSYTTLMKAFAASGQPKLAHK 364
Query: 188 IWKSLRMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWK 228
++ + + R + ++ +Y LG L+ +++++ K
Sbjct: 365 VFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMK 406
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 2/246 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y L+ K AE+LF + NL N + +N ++ Y G+V+ + E +
Sbjct: 103 VYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERM 162
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K++ V P I T+N +S I++ + L+E+ C+ G D Y + + + +
Sbjct: 163 KKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCN-GFVPDGFTYSIIFDGLLKSDD 221
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A EA + T L+ G +K +++ KSL Y
Sbjct: 222 GAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYN 281
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
I++ Y +G + I+Q + I A N ++ F ++ + +KA E+ ++
Sbjct: 282 TIVNGYCQIGDMDRAILTIEQMESRGLRPNCI-AFNSVIDKFCEMQMIDKAEEWVKKMVG 340
Query: 266 KNCAPT 271
K AP+
Sbjct: 341 KGIAPS 346
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 6/255 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + ETY L+ Y + ++ E ++++ N + Y ++ G++ + +
Sbjct: 344 APSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEM 403
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+ ++ + V+P+ YN+ I + + +F DEMS + G+ V Y +L+
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGA-TIVTYNSLIKGL 462
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L AE + ITY+ LI Y+ GN K +++++++ K T
Sbjct: 463 CKMGKLKEAEEMFFLITSTGHCP-DVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT 521
Query: 201 SRNYICILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ ++S G LKE + ++ Q S D N ++ + + G +KA
Sbjct: 522 INTFHPLISGCSKEGIKLKET--LFNEMLQMNLSP-DRVVYNAMIHCYQETGHVQKAFSL 578
Query: 260 HMLLLQKNCAPTNAS 274
++ P N +
Sbjct: 579 QKEMVDMGVRPDNKT 593
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 16/233 (6%)
Query: 45 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 104
+LF+ + + L+Y M + +G ++ + E +KR+ VVP++F YN+ I
Sbjct: 52 DLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGL 111
Query: 105 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 164
I +K EMS + + V + L++ Y A V+ +K +
Sbjct: 112 CKEKRIRDAEKLFGEMSVRN-LVPNRVTFNTLIDGYCKAGE-VDVAIGLRERMKKEKVEP 169
Query: 165 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML--GHLKE--- 219
IT++ L+ +GL +I++ R ++ ++ +Y ++ G LK
Sbjct: 170 SIITFNSLL---SGLCKARRIEEA----RCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDG 222
Query: 220 VGEIIDQWKQSATSDFDIS--ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
G +D ++++ I C+ LL G EKA E L++ P
Sbjct: 223 AGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVP 275
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ Y ++A E+++ L N + +N ++ + + ++K V+++
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K + P + TYN+ I + + L+EM ++G + + Y +L+N +
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME-ENGEKPNVISYGSLINCLCKDGKI 398
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
+ AE + + I Y+ LI +G + + + + T Y
Sbjct: 399 LEAEMVLRDMVGRGVLPNANI-YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNS 457
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ +G LKE E+ + D+ N L+ +S+ G ++K E + + +
Sbjct: 458 LIKGLCKMGKLKEAEEMFFLITSTGHCP-DVITYNSLISGYSNAGNSQKCLELYETMKKL 516
Query: 267 NCAPT 271
PT
Sbjct: 517 GLKPT 521
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 44 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
E LF + Q NLS + ++YN M+ Y G V+K + +E+ V PD TYN I
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600
Query: 104 CAATLNIDQVKKFLDEM 120
+ + K +D+M
Sbjct: 601 HLKEGKLSETKDLVDDM 617
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 100/205 (48%), Gaps = 3/205 (1%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIK 86
T +LH Y+ ++A +FER+K LS + + YN M+ +Y +G+ +K+ +++E++
Sbjct: 236 TTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMR 295
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + D FT + IS+C I++ K+F E+ SG V Y L+ ++ A +
Sbjct: 296 NEGLQFDEFTCSTVISACGREGLINEAKEFFVELK-SSGYEPGTVTYNALLQVFGKAG-I 353
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
+ + L E E + +TY+ L+ Y G ++ + ++ + Y
Sbjct: 354 YSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTT 413
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSA 231
++++Y G + ++ +Q K+S
Sbjct: 414 VINAYGRAGKEVKALQLFNQMKKSG 438
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL ++ A +A + + ++ +N + +++ YNE++ Y+ G E+ A V++ +
Sbjct: 340 TYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTM 399
Query: 86 KRKNVVPDIFTYNLWISS 103
RK V+P+ TY I++
Sbjct: 400 TRKGVMPNAVTYTTVINA 417
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+++YA KAEE+ + + +S S + + YN ++ + G +++ V+ E+
Sbjct: 690 TYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEM 749
Query: 86 KRKNVVPDIFTYNLWISSCAAT---LNIDQVKKFLDEMSC 122
+ + P IFTYN ++S A +D+V ++ + +C
Sbjct: 750 TTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNC 789
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K + ER FE L + + + ++L ++A E+A+++ + +++S L + +
Sbjct: 630 KCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLV 689
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
YN +M +Y G+ K +++ + + PD+ +YN I + + + + EM
Sbjct: 690 TYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEM 749
Query: 121 S 121
+
Sbjct: 750 T 750
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 103/249 (41%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL+ A + AE + ++ N ++ M+ Y G V + + ++I
Sbjct: 550 TYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDI 609
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P I + + +++ +E+ +G D V + ++++I+ ++
Sbjct: 610 YDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELM-KNGYKPDMVIFNSMLSIF-AKNN 667
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ L +S Q +TY+ L+ +YA G K ++I K L + + +Y
Sbjct: 668 MYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYN 727
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC----NRLLGAFSDVGLTEKANEFHM 261
I+ + G ++E ++ + I C N + ++ G+ + +E
Sbjct: 728 TIIKGFCRQGLMQEAIRVMSEMTTRG-----ICPCIFTYNTFVSGYAGRGMFAEVDEVIS 782
Query: 262 LLLQKNCAP 270
++QKNC P
Sbjct: 783 YMIQKNCKP 791
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT +++ Y A KA +LF ++K+S N YN ++ L + E++ ++ ++
Sbjct: 410 TYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469
Query: 86 KRKNVVPDIFTYNLWISSCA 105
+ P+ T+N ++ C
Sbjct: 470 RINGCPPNRITWNTLLAMCG 489
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY L+ Y A + E+ + + + + + NA+ Y ++ Y G+ K +
Sbjct: 373 SVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFN 432
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++K+ VP++ TYN ++ +++ K L +M
Sbjct: 433 QMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 98/233 (42%), Gaps = 2/233 (0%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A E E ++ L N + Y+ +M Y +G E ++E ++RK + P++ TY L +
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+++ ++ + EM D V Y ++N Y + +A + E +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA-TRVRNEMRDAG 354
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
Y+ +I LG +++ ++ + + + +Y ++ Y G +++
Sbjct: 355 IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAF 414
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
E+ ++ + ++ N LL F + + A L+L++ AP S
Sbjct: 415 EMCRMMVRNGLAATTLTY-NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 4/232 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y A++ Y G WTE A + E +++ LS N + Y ++ Y G++E+ VV+E+
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314
Query: 86 KRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
K ++V D Y + I+ +D + +EM D+G + Y ++N
Sbjct: 315 KETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLFVYNTMINGLCKLG 373
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + L E E + +Y+ LI Y G+ K ++ + + T+ Y
Sbjct: 374 RMEEVQ-KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+L + L + + + + + +IS C+ LL G TE+A
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS-CSTLLDGLFKAGKTEQA 483
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 22/232 (9%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+K + + + N +M+N ++ G++ + E ++ K +PD FTY+
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
I CAA+ +ID+ D M +G + + + Y +L+ + L A + K
Sbjct: 742 IHGCAASGSIDEAFSLRDVM-LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
I+ ITY+ LI Y G K + +K KQKM G+++E
Sbjct: 801 ISP-NGITYNTLIDEYCKEG---KTTEAFK----LKQKMVEE------------GYMEEA 840
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+++DQ ++ I+ C L+ + G E+ ++ + + + PTN
Sbjct: 841 IKLLDQMIENNVDPNYITYCT-LIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ----------- 74
TY +L++ + +A LF +++ +S N + YN ++ Y G+
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 75 -----VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+E+ +++++ NV P+ TY I + N++++ K DEM +
Sbjct: 832 VEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891
Query: 130 WV 131
W+
Sbjct: 892 WI 893
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 15/247 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YTAL+ Y A + A L +R+ + N+ YN ++ +V++ L++E +
Sbjct: 287 YTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMI 346
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+K + + TY + I + + D + LD+M SG D Y ++ + T ++
Sbjct: 347 QKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV-SSGYQPDVYIYTAFIHAFCTRGNI 405
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE + E+ + +TY +I Y GLG + + K + T + Y C
Sbjct: 406 KEAEDMMSMMFERGVMP-DALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSC 464
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV---GLTEKANEFHMLL 263
++ LKE E+ ++K A D S N +DV E A E +
Sbjct: 465 LIKHL-----LKE--ELTKKYKNVALCD---SIPNVFFADVADVWKMMKFETALELFEKM 514
Query: 264 LQKNCAP 270
L+ C+P
Sbjct: 515 LEHGCSP 521
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 37/201 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ Y E A+E+ + + ++ + N YNE++ + V + ++ ++
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P + TYN I C G D + +NL+N
Sbjct: 206 LESRLTPSVVTYNSLIHG-----------------QCKIGYLDSAYRLLNLMN------- 241
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
E + QW TY I G ++ + ++ SL+ K Y
Sbjct: 242 ------------ENGVVPDQW-TYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYT 288
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
++ Y G + + ++D+
Sbjct: 289 ALIDGYCKAGKMDDANSLLDR 309
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 19/248 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT L+H ++ +F+++++ + Y ++ G+ + + E+
Sbjct: 41 SYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM 100
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+I TY + I++ +++ ++ LDEM + G Y L++ Y
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV-EKGLVPSVPTYNALIDGYCKEG- 158
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL---RMTKQKMTSR 202
+V A L + TY+ LI + N + + + R+T +T
Sbjct: 159 MVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYN 218
Query: 203 NYI---CIL----SSYLMLGHLKEVGEIIDQWKQSATSDF-----DISACNRLLGAFSDV 250
+ I C + S+Y +L + E G + DQW S D I N L + +
Sbjct: 219 SLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEK 278
Query: 251 GLTEKANE 258
G+ KANE
Sbjct: 279 GI--KANE 284
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 105/256 (41%), Gaps = 9/256 (3%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TYT ++H + +A LF +++ N Y M+ ++E+ +
Sbjct: 72 PTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRI 131
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++E+ K +VP + TYN I ++ ++ LD M +S ++ Y L+ +
Sbjct: 132 LDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERT-YNELICGFC 190
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ V+ + L + +S +TY+ LI +G +D ++ L + +
Sbjct: 191 RKKN-VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIG---YLDSAYRLLNLMNENGVV 246
Query: 202 RN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
+ Y + + G ++E + + K+ ++ L+ + G + AN
Sbjct: 247 PDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIY-TALIDGYCKAGKMDDANS 305
Query: 259 FHMLLLQKNCAPTNAS 274
+L ++C P +++
Sbjct: 306 LLDRMLTEDCLPNSST 321
>gi|302755512|ref|XP_002961180.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
gi|300172119|gb|EFJ38719.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
Length = 497
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 111/236 (47%), Gaps = 15/236 (6%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSN-LSFNALMYNEMMTLYMSVGQVEKVALVVE 83
E YT + K +A++L +++++ + L+ +++ +N ++ + + GQ+E+ VV+
Sbjct: 52 ECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQ 111
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIY 140
E+++KN P TYN I +Q ++ + + + +S S+D ++ V N+
Sbjct: 112 EMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLR 171
Query: 141 ITASHLVNA--ESSTLVEAEKSIT-------QRQWITYDFLIILYAGLGNKDKIDQIWKS 191
T + L+NA L EA + + Q +TY+ L YA G +++ +
Sbjct: 172 -TMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIAD 230
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 247
++ + K R Y ++S Y G + +++ + K D+ A N LL +
Sbjct: 231 MKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHP-DVVAFNTLLKGY 285
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/266 (16%), Positives = 103/266 (38%), Gaps = 15/266 (5%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P++ T LL+ + E+A + +K + + +A+ YN + Y + G+V +
Sbjct: 164 PVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAE 223
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ ++ ++K + P++ TY + IS ++ + L + + G D V + L+
Sbjct: 224 LEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFE-GLHPDVVAFNTLL 282
Query: 138 NIYITASHLVNAESSTLVEAEKSI-------------TQRQWITYDFLIILYAGLGNKDK 184
Y+ + E ++ + + TY ++ ++ G DK
Sbjct: 283 KGYVEQQSSQQQQDFQSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGVADK 342
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 244
I ++ + K R + + Y+ G E ++ + ++ ++
Sbjct: 343 AQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAP-NVVVYTTII 401
Query: 245 GAFSDVGLTEKANEFHMLLLQKNCAP 270
+ +G + A L+L++ AP
Sbjct: 402 SGWCSMGRMDDALRVLELMLERGEAP 427
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ + K EKA ELF+ + + Y +++ Y G ++K ++EE+K
Sbjct: 160 YIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEMK 219
Query: 87 R-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
PD+ TY++ + SC D+++ L +M+ + G + V Y L++ Y A
Sbjct: 220 NTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMT-NRGIKPNTVTYNTLIDAYGKARK 278
Query: 146 LVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
E S LVE A++ W T + + + +G + +++ ++ + + +
Sbjct: 279 FSEME-SILVEMLADRYCQPDVW-TMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQT 336
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ +L SY K++ ++ ++ Q + I N ++ AF G ++ L+
Sbjct: 337 FNILLDSYGKAQDYKKMSAVM-EYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLM 395
Query: 264 LQKNCAPT 271
+ P+
Sbjct: 396 RSERIKPS 403
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 106/247 (42%), Gaps = 6/247 (2%)
Query: 26 TYTALLHLYAGA-KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY L+ Y A K++E L E + + N + + ++GQ+E + E+
Sbjct: 265 TYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKCYEK 324
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + P++ T+N+ + S + ++ ++ M S V + +++ + A
Sbjct: 325 FQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQ-KYHYSWTIVTFNIVIDAFGKAG 383
Query: 145 HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L E L+ +E+ + +T L+ YA G +KI + + + + + +
Sbjct: 384 DLKQMEYLFRLMRSER--IKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVF 441
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ C++ +Y LG L E+ +++ KQ+ DI ++ ++ G+ A E LL
Sbjct: 442 FNCLVDAYARLGCLAEMKGVLEMMKQNGCKP-DIVTYRTMIKTYTYKGMDSHAKELRELL 500
Query: 264 LQKNCAP 270
N P
Sbjct: 501 PTVNRPP 507
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++Y ++L GA T +A E+ ++ + + + +MYN + + + Q+ + + E+
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+K+ PDIFTYN+ ISS +D+ +E+ S D + Y +L+N
Sbjct: 468 MKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELE-RSDCKPDIISYNSLIN 520
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y + K +LFE++K+ S + YN +++ + VG+V++ + EE++
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELE 504
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R + PDI +YN I+ ++D+ EM + G + D V Y L+ + +
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ-EKGLNPDVVTYSTLMECF-GKTER 562
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLI 173
V S E Q +TY+ L+
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 104/240 (43%), Gaps = 11/240 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY LL Y ++ + KA +++ +++ + YN ++ ++ + EK V E
Sbjct: 203 SFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFE 259
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++K+++ D ++Y + I + D+ +EM + G + + V Y L+ + +
Sbjct: 260 DMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITE-GLTLNVVGYNTLMQV-LAK 317
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+V+ ++ + TY ++ L G ++D I + ++K+ MT
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGI---VEISKRYMTQGI 374
Query: 204 YICILSSYLMLGHLKEVGEII-DQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFH 260
Y ++ + LGH+ E + D W + D +S L GA + E ++ H
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EGL L+ Y L+ + A K +KA ++F R+ ++ N Y+ ++ L ++ GQ
Sbjct: 299 EGLTLNVVG---YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQ 355
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKY 133
+ ++ +V EI ++ + I++Y + + + ++ + + F D S G D Y
Sbjct: 356 LVRLDGIV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SY 410
Query: 134 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSL 192
++++ A + A +E I ++ +T + +++ LG +I I
Sbjct: 411 MSMLESLCGAGKTIEA-----IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 193 RMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAF 247
K+ S + Y ++SS+ G + EV E I+ +++ SD DI + N L+
Sbjct: 466 EKMKKDGPSPDIFTYNILISSF---GRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 248 SDVGLTEKAN 257
G ++A+
Sbjct: 523 GKNGDVDEAH 532
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + ++A +FE +++S+ + + YN ++ G V++ + +E+
Sbjct: 479 TYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ K + PD+ TY+ + T ++ +EM
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 15/257 (5%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ + LLH +A T+ + F+ + + YN M+ G +E + + E
Sbjct: 98 TRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFE 157
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIY 140
E+K + ++PD TYN I +D F +E MSC+ D + Y L+N +
Sbjct: 158 EMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEP----DVITYNTLINCF 213
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK---SLRMTKQ 197
L E ++S + ++Y L+ + +D + Q K +R
Sbjct: 214 CKFGKLPKG-LEFFREMKQSGLKPNVVSYSTLVDAFC---KEDMMQQALKFYVDMRRLGL 269
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
Y ++ +Y +G+L + + D+ Q ++++ L+ DV ++A
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV-EWNVVTYTALIDGLCDVERIKEAE 328
Query: 258 EFHMLLLQKNCAPTNAS 274
E ++ P AS
Sbjct: 329 ELFGKMVTAGVIPNLAS 345
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 4/173 (2%)
Query: 11 ERYFEGL--PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 68
+R+F+ + S T TY ++ E A LFE +K L + + YN M+
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177
Query: 69 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
Y VG+++ EE+K + PD+ TYN I+ + + +F EM SG
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMK-QSGLKP 236
Query: 129 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+ V Y LV+ + + A + + + TY L+ Y +GN
Sbjct: 237 NVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEH-TYTSLVDAYCKIGN 288
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+ + ++AEELF ++ + + N Y ++ ++ +++ +++E+
Sbjct: 310 TYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEM 369
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
K + + PD+ Y +I S I+ K ++EM + G + Y L++ Y +
Sbjct: 370 KGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQ-EKGIKANTFIYTTLMDAYFKS 426
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALV 81
T+ T+ L+ K KA + F R+ L NA +Y M+ QVE +
Sbjct: 447 TAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTL 506
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
E++ +K +VPD Y I N+ Q D+M+
Sbjct: 507 FEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMA 546
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 12/253 (4%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+T+ LL +G K +E+AE +E +K+ + + + YN ++ ++ ++EK VV
Sbjct: 215 QTFNILL---SGWKSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVAR 271
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ ++++PD+ TY I D+ + L EM + G D Y ++ Y A
Sbjct: 272 MREEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMK-EHGCYPDVAAYNAVIRNYCIAK 330
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSRN 203
L +A S + E E +Y+ +++ + + W RM
Sbjct: 331 RL-DAAYSLMAEMESKGMSPNATSYNLFFRVFSW---SNDLRNSWDFYGRMMDAGCLPNT 386
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFHM 261
C+ L H K V + W F I + LLG D+G +A + +
Sbjct: 387 QSCMFLIKLFKRHEK-VEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFL 445
Query: 262 LLLQKNCAPTNAS 274
+++K P+N S
Sbjct: 446 QMVEKGHKPSNVS 458
>gi|356563451|ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 714
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+T TA++ +Y A+W+ A EL++R+K++ + ++YN ++ + VG VE+ + +
Sbjct: 365 KTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 424
Query: 85 IKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
+K+ + PD ++Y ++ + ++D+ K +EM C SG
Sbjct: 425 MKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLFNEM-CKSG 465
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 5/241 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+PL + TY+ ++ +KA FER+ +++L + + Y+ ++ +Y +G+V
Sbjct: 219 GVPLD---NITYSTIISCAKKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLGKV 275
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
E+V + E + PD T+++ + D ++ EM G + V Y
Sbjct: 276 EEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEME-SVGVQPNLVVYNT 334
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
L+ A V A E I + + I ++D + ++W+ ++
Sbjct: 335 LLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWSRDAL-ELWQRMKEN 393
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
M Y +L+ +G ++E + KQSA D + +L + G +K
Sbjct: 394 GWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDK 453
Query: 256 A 256
A
Sbjct: 454 A 454
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YTA + Y E+A EL ++ L+ N + YN ++ G+ EK +++E+
Sbjct: 567 SYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKEL 626
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
K V PD+ +YNL IS+C ++ L EM + G + D + Y + +
Sbjct: 627 KETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAE-GLTPDVISYTSAIR 678
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 37 AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFT 96
+W E EL ++ L+ N + YN + GQ EK ++ ++K + PD T
Sbjct: 474 GRWQE-GLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSIT 532
Query: 97 YNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
YN I++C+ + L EM G + D + Y ++ Y
Sbjct: 533 YNSAIAACSKRGRWKEAVALLREMP-GQGLTPDVISYTAAIDAY 575
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
TA+ +W + E L E +Q +S N YN + S Q E ++ E+
Sbjct: 149 TAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMAD 208
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ VVPD +YN I +C ++V L EM G + D + Y +++
Sbjct: 209 REVVPDEISYNSAIKACGRGGQWERVIGLLREMP-SVGLTPDAITYNSVI 257
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Query: 36 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 95
G +W E+ L + L+ +A+ YN ++T GQ ++ V+ E+ K + P+
Sbjct: 228 GGQW-ERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETI 286
Query: 96 TYNLWISSCAATLNIDQVKKFLDEMSCDS---------------GGSDDWVKYVNLVN 138
+YN+ I +C + + + L +M GG W V+L++
Sbjct: 287 SYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLD 344
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
+A++ G +W EKA EL V L+ +A +N + G+ ++ +++E+
Sbjct: 360 SAIVACGKGGQW-EKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPA 418
Query: 88 KNVVPDIFTYNLWISSCA 105
K + PD +YN I +C
Sbjct: 419 KRLKPDAISYNSAIEACG 436
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T T+ +++ + +A +LF+ +K+ S NA+MYN +M Y+ + ++++ ++
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
EE+++K + PD T+N+ +S + + L ++S D +L +I +
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR-----SLFDISV 238
Query: 142 T----ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ A L A + EK ++ I ++ +I Y+ G +DK + +K M
Sbjct: 239 SGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYK--LMVHF 295
Query: 198 KMTSRNYICILSSYLML----GHLKEVGEIIDQWKQSATS 233
+T C SS LM G L+E E+I Q + S
Sbjct: 296 GLTPSPSTC--SSLLMGLSINGRLQEATELIGQMIEKGLS 333
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++A + + E+A +F + + L N YN ++ + G++ + AL +E++
Sbjct: 373 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE-ALKLEKV 431
Query: 86 KR-KNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
R + ++PDIFT N+ I C + F+D +G S D + Y L+N Y A
Sbjct: 432 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQ--TGLSPDIITYNTLINGYCKA 489
Query: 144 SHLVNAES 151
+VNA++
Sbjct: 490 FDMVNADN 497
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 100/249 (40%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++ ++ + E L + + + NA YN ++ G+ +
Sbjct: 58 TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM 117
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P + T+N I++ N+ + +K D + + G S + + Y L+N Y+
Sbjct: 118 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK-EMGFSPNAIMYNTLMNGYVKMRE 176
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ + E K IT++ L+ + G ++ D++ K + + +
Sbjct: 177 -IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFD 235
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+S G L E E + + S I A N ++ A+S GL +KA E + L++
Sbjct: 236 ISVSGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 294
Query: 266 KNCAPTNAS 274
P+ ++
Sbjct: 295 FGLTPSPST 303
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 98/233 (42%), Gaps = 2/233 (0%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A E E ++ L N + Y+ +M Y +G E ++E ++RK + P++ TY L +
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+++ ++ + EM D V Y ++N Y + +A + E +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA-TRVRNEMRDAG 354
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
Y+ +I LG +++ ++ + + + +Y ++ Y G +++
Sbjct: 355 IHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAF 414
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
E+ ++ + ++ N LL F + + A L+L++ AP S
Sbjct: 415 EMCRMMVRNGLAATTLTY-NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y A++ Y G WTE A + E +++ LS N + Y ++ Y G++E+ VV+E+K
Sbjct: 256 YHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK 315
Query: 87 RK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++V D Y + I+ +D + +EM D+G + Y ++N
Sbjct: 316 ETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLFVYNTMINGLCKLGR 374
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ + L E E + +Y+ LI Y G+ K ++ + + T+ Y
Sbjct: 375 MEEVQ-KVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+L + L + + + + + +IS C+ LL G TE+A
Sbjct: 434 TLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS-CSTLLDGLFKAGKTEQA 483
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 104/239 (43%), Gaps = 17/239 (7%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+K + + + N +M+N ++ G++ + E ++ K +PD FTY+
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
I CAA+ +ID+ D M +G + + + Y +L+ + L A + K
Sbjct: 742 IHGCAASGSIDEAFSLRDVM-LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML------ 214
I+ ITY+ LI Y G K + +K KQKM + +Y +L
Sbjct: 801 ISP-NGITYNTLIDEYCKEG---KTTEAFK----LKQKMVEEGIQPTVITYSILIYGLCT 852
Query: 215 -GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
G+++E +++DQ ++ I+ C L+ + G E+ ++ + + + PTN
Sbjct: 853 QGYMEEAIKLLDQMIENNVDPNYITYCT-LIHGYIKSGNMEEISKLYDEMHIRGLLPTN 910
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L++ + +A LF +++ +S N + YN ++ Y G+ + + +++
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P + TY++ I +++ K LD+M ++ +++ Y L++ YI + +
Sbjct: 832 VEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM-IENNVDPNYITYCTLIHGYIKSGN 890
Query: 146 L 146
+
Sbjct: 891 M 891
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+H A + ++A L + + + L+ N + YN ++ G++ + + ++
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K + P+ TYN I + K +M + G + Y L+ T +
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM-VEEGIQPTVITYSILIYGLCTQGY 855
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
+ A L + ++ +ITY LI Y GN ++I +++ + +
Sbjct: 856 MEEA-IKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 903
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 9/260 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P SA Y A + T+KA E+FER+K+ + Y ++ LY +
Sbjct: 271 GFPPSAVV---YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKS 327
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V E++ + P+I T+ +++ A ++ ++ +++ ++G D Y
Sbjct: 328 YMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNA 386
Query: 136 LVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L+ Y A A E +L++ R +Y+ ++ Y G + +++ ++
Sbjct: 387 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGLHEDAQAVFEVMKR 444
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
T ++++ +LS+Y G + + EI++Q +S D N +L + +G E
Sbjct: 445 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFE 503
Query: 255 KANEFHMLLLQKNCAPTNAS 274
K E + ++K P + S
Sbjct: 504 KMEEV-LTAMEKGPYPADIS 522
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 61
T+TAL++ +A EKAEE+FE+++++ L ++NALM
Sbjct: 348 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 407
Query: 62 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
YN M+ Y G E V E +KR + P + ++ L +S+ + +
Sbjct: 408 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 467
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
+ ++ +++M SG D +++N+Y E L EK TY+
Sbjct: 468 AKCEEIVNQMH-KSGIKPDTFVLNSMLNLYGRLGQFEKME-EVLTAMEKGPYPADISTYN 525
Query: 171 FLIILYAGLGNKDKIDQIWKSL 192
LI +Y G +++++++SL
Sbjct: 526 ILINIYGRAGFFARMEELFRSL 547
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 38/248 (15%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ Y +KAE + + ++ Y ++ Y + G +EK V E++
Sbjct: 209 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 268
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P YN +I + + + + M D
Sbjct: 269 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDR---------------------- 306
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
Q TY LI LY +++ +R K K +
Sbjct: 307 ---------------CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTA 351
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+++++ G ++ EI +Q Q A + D+ A N L+ A+S G A E L+
Sbjct: 352 LVNAFAREGLCEKAEEIFEQL-QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 410
Query: 267 NCAPTNAS 274
C P AS
Sbjct: 411 GCEPDRAS 418
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T +++ LL Y+ A K EE+ ++ +S + + + N M+ LY +GQ EK+ V+
Sbjct: 450 TMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVL 509
Query: 83 EEIKRKNVVPDIFTYNLWIS 102
+++ DI TYN+ I+
Sbjct: 510 TAMEKGPYPADISTYNILIN 529
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P A S TY L+++Y A + + EELF + NL + + + + Y Q +
Sbjct: 516 PYPADIS-TYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNR 574
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
V EE+ PD T + +S+C+ I +V + M D
Sbjct: 575 CLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKD 620
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL+ +A +K E E++ ++ N + YN M+ +Y +G+++ + +E+
Sbjct: 365 TYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD TY + I S I + K L++M+ D+G + + L+ Y
Sbjct: 425 RAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT-DAGLKPTLIAFSALICAYAKGGR 483
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+AE +T S + + Y ++ ++A G+ +K+ +++ + + Y
Sbjct: 484 RADAE-NTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQ 542
Query: 206 CILSSYLMLGHLKEVGEII 224
+L + +E+ E+I
Sbjct: 543 VLLVALAKEDKCEEIEEVI 561
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 4/208 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK-VAL- 80
T + + A++ +YA + + A +L + + + + + +N ++ G + VAL
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+++ + PD+ TYN IS+C+ + N++ ++M D W Y +V+++
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWT-YNAMVSVH 338
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
AE EK ITY+ L+ +A GN DK++ + L K
Sbjct: 339 GRCGKAEEAERLFRELVEKGFMP-DAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKN 397
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWK 228
Y ++ Y +G L + D+ +
Sbjct: 398 EITYNTMIHMYGKMGRLDLAVGLYDEMR 425
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 2/190 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ ++ E+AE LF + + +A+ YN ++ + G V+KV E++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + TYN I +D DEM G + D V Y +++ +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA-MGCTPDAVTYTVMIDSLGKMNR 448
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L + + + I + LI YA G + + + + + K Y+
Sbjct: 449 IAEA-GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYL 507
Query: 206 CILSSYLMLG 215
+L + G
Sbjct: 508 VMLDVFARSG 517
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
ALL++Y A ++ +++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 925 ALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKR 984
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
+ P + +Y +++ A +Q + +EM S + + Y ++ IY A +
Sbjct: 985 GLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSI-YHMMMKIYRNAGNHSK 1043
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
AE+ V E I + T L+ Y G + + + +L+ + ++++ Y +
Sbjct: 1044 AENLLAVMKEDGI-EPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVF 1102
Query: 209 SSYLMLG 215
+YL G
Sbjct: 1103 DAYLKNG 1109
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ AL+H YA + EKA +F+ + ++ N MM + G+++++ +VVEE++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
N T L + + A ++ +V K + M +G + Y +++++ +
Sbjct: 843 DMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKA-AGYLPNMHLYRSMISLLCHHNRF 901
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ E + E E + + + L+ +Y GN D+ Q+++S+
Sbjct: 902 RDVE-LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSI 946
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 13 YFEGLPLSAKTSET---YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
YFE + A+ T Y LL +A A T++ + LF+ + +S +S + YN ++ Y
Sbjct: 184 YFEKMKCIARCQPTIVTYNILLRAFAQAGDTKQVDILFKDLDESVVSPDIYTYNGVLDAY 243
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
G ++++ V+ +K K PD+ T+N+ I S D++++ + S
Sbjct: 244 GKNGMIKEMESVLLRMKSKQCRPDVITFNILIDSYGRKQIFDKMEQVFKSL-LRSKERPT 302
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ +++ Y A AE + + E+ + ++T + LI++YA K Q++
Sbjct: 303 HPTFNSMITNYGKARLREKAE-YVVKKMEELGYKPNYVTQECLIMMYAHCDCVSKARQVF 361
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
L ++ K+ + +L +Y M G E +++D
Sbjct: 362 DELVSSQNKVQLSSLNSMLDAYCMNGLHTEADQLLD 397
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQS---NLSFNALMYNEMMTLYMSVGQVE 76
+ T++TY ++ Y+ A + + +F+ V S + +A MYN M+ Y G+VE
Sbjct: 220 PSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGKVE 279
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
+ V + +KR+ V I T+N ++ + + V + L D D Y L
Sbjct: 280 QAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAEDVFRKLQAAKLDP----DVFSYTAL 335
Query: 137 VNIYITA--SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
VN Y A + +A ++ A TQ + Y+ LI YA + + + K ++
Sbjct: 336 VNAYAKARRAECAHAAFDDMIAAGIRPTQ---VAYNALINAYAKCKDPEGARAVLKQMKQ 392
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
T +Y ++S+Y+ + + + + + + K++
Sbjct: 393 NGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEA 428
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T Y AL++ YA K E A + +++KQ+ + Y +++ Y+SV + K V
Sbjct: 363 TQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTV 422
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+K ++ P++ T+ + ++ A +D + + + M +G + Y LVN Y
Sbjct: 423 LRMKEADLQPNLQTFCVLMTGYANGNKLDNMMRSFETMKL-AGLEPNRHVYTVLVNAY 479
>gi|359497557|ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like, partial [Vitis vinifera]
Length = 253
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ K +A L E + ++ + +YN +M Y + + + V +++
Sbjct: 22 TYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKM 81
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + V PD+ TYN I + + + + +KFLD M+ + G D V Y +L+N +
Sbjct: 82 KEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMA-EMGHFPDAVTYTSLMNGLCREGN 140
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + L E E TY+ L+ L ++ +++ ++ K+ +Y
Sbjct: 141 ALGA-LALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYA 199
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
+ + G + E E D +S + D D++A
Sbjct: 200 TFVRALCKEGRVAEAYEAFDYVVESKSFD-DVTA 232
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 123/309 (39%), Gaps = 48/309 (15%)
Query: 7 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ +R F+ +P T T+TAL+H Y EK LFE+++ + N YN
Sbjct: 54 VAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNI 113
Query: 65 MMTLYMSVGQVEKVALVVEEI-----------------------------------KRKN 89
++ + G+ E+ L+ EE+ +R+
Sbjct: 114 LVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREG 173
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
+ P + T+NL + + F ++M +G V Y L+ + A ++ A
Sbjct: 174 IRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRM-AGYQPSAVTYNALIAGFCRARDMIRA 232
Query: 150 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 209
+ E+ + + +TY LI +A + DK +++ + ++ R Y ++
Sbjct: 233 NRAFSDMKERGLAPTK-VTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVH 291
Query: 210 SYLMLGHLKEVGEII----DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+ M G++K+ ++ ++ Q +D+ L+ + G + KA + M + +
Sbjct: 292 ALCMEGNMKDARKLFQSIGEKGLQVGNVIYDM-----LIYGYGREGSSYKAMKLIMEMRK 346
Query: 266 KNCAPTNAS 274
K P +AS
Sbjct: 347 KGFVPNSAS 355
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 84/185 (45%), Gaps = 4/185 (2%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
TAL+H Y + +A+ +F+ + + L+ N + + ++ Y G+ EK + E+++
Sbjct: 42 TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 147
+ P+++TYN+ + T ++ + +EM G + + V Y L+ +
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPA-KGITRNVVSYNTLIAGLCRYRKMK 160
Query: 148 NAESSTLVE-AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
+A + L+E + + +T++ L+ Y G +RM + ++ Y
Sbjct: 161 DA--TQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNA 218
Query: 207 ILSSY 211
+++ +
Sbjct: 219 LIAGF 223
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 12/172 (6%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TYTAL++ L +W + A L + +K+ ++ N + Y+ ++ ++ G+V + + EE
Sbjct: 227 TYTALVNGLCNSGRWNDAARLLRDMIKRK-ITPNVITYSALLDAFVKNGKVLEAKEIFEE 285
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ R ++ PDI TY+ I+ ID+ + D M G D V Y L+N + A
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV-SKGCFPDVVSYNTLINGFCKAK 344
Query: 145 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ + ++ + ++QR +TY+ LI + +G+ DK + + +
Sbjct: 345 RVEDG-----MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L++ + AK E +LF ++ Q L N + YN ++ + VG V+K ++
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Query: 86 KRKNVVPDIFTYNLWISS 103
V PDI+TYN+ +
Sbjct: 392 DSFGVSPDIWTYNILLGG 409
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 15/236 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y A++ + A + F+ + + + N + Y ++ + G+ A ++ ++
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITA 143
++ + P++ TY+ + + + + K+ +E MS D D V Y +L+N
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP----DIVTYSSLINGLCLH 308
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A + K ++Y+ LI G +++ K R Q+ N
Sbjct: 309 DRIDEANQMFDLMVSKGCFP-DVVSYNTLI---NGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 204 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y ++ + +G + + E Q S DI N LLG D GL EKA
Sbjct: 365 TVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP-DIWTYNILLGGLCDNGLLEKA 419
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EG+P T Y+++LH + +A LF+++ + N+ N + + ++
Sbjct: 109 EGIPPDVFT---YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRM 165
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ + LV E + K + PD++TYN + + +D+ +K + M D G V+
Sbjct: 166 ISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIM--DRKGCAPNVRSY 223
Query: 135 N-LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
N L+N + + + A+ + KS+T TY L+ + +G + ++ K +
Sbjct: 224 NILINGHCKSGRIDEAKGLLAEMSHKSLTP-DIFTYSTLMRGFCQVGRPQEAQELLKEMC 282
Query: 194 MTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 253
Y +L GHL E E++ ++S +I L+ G
Sbjct: 283 SYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEP-NIFIYTILIEGMCTFGKL 341
Query: 254 EKANEFHMLLLQKNCAPT 271
E A E L K PT
Sbjct: 342 EAARELFSNLFVKGIQPT 359
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ Y ++A++LF + + + N YN ++ + G++++ ++ E+
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K++ PDIFTY+ + + ++ L EM C G + + Y +++ H
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM-CSYGLLPNLITYSIVLDGLCKHGH 305
Query: 146 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L E+ L++A ++S + Y LI G + +++ +L + + T Y
Sbjct: 306 L--DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 205 ICILSSYLMLGHLKEVGEIIDQW 227
++S L G E E+ +
Sbjct: 364 TVMISGLLKGGLSNEACELFREM 386
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ LYA ++A LF +++ +A +YN ++ + GQ ++E
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LVTHNIVL 123
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQK 198
S L N + + I + +T D +I +G + +++ S+R + K
Sbjct: 124 SALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK 183
Query: 199 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y I+ SY + G ++ I D +I A N LLGA++ G+ +A
Sbjct: 184 CPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP-NIVAYNSLLGAYASRGMHREA 242
Query: 257 NEFHMLLLQKNCAP 270
L+ + P
Sbjct: 243 LAIFNLIKKNGLRP 256
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 55/93 (59%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+LL+ Y + EKA E+F ++K+++ N + YN ++ Y S G +++ ++ E+
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
++ + PD+ + + +++C I +++ L+
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILE 352
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + I
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + PDI +Y +++ + ++ ++ ++M +S + V Y L++ Y +A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK-VSYNALIDAYGSAGM 308
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L E EK Q ++ L+ +I+ I ++ R + + Y
Sbjct: 309 LKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ SYL G ++ E+ ++S D N L+ S +G
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKP-DAVTYNILISGSSKLG 412
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ Y K KA+ + + Q ++ + YN ++ + + +V++ + +E+
Sbjct: 304 TYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEM 363
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+++PD+ TYN I I K +DEM D G D + Y ++++ + +H
Sbjct: 364 HHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH-DRGVPPDIITYSSILDA-LCKNH 421
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V+ + L + + + TY LI G + I++ L + +T Y
Sbjct: 422 QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 481
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + G E ++ + K ++
Sbjct: 482 VMIHGFCNKGLFDEALALLSKMKDNS 507
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 71/163 (43%), Gaps = 5/163 (3%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++Y L+ + K ++A LF+ + ++ + + YN ++ +G++ +V+E
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + V PDI TY+ + + +D+ L ++ D G + Y L++
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK-DQGIRPNMYTYTILIDGLCKGG 456
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
L +A + E + + IT + ++ G NK D+
Sbjct: 457 RLEDAHNI----FEDLLVKGYNITVNTYTVMIHGFCNKGLFDE 495
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 41/230 (17%), Positives = 92/230 (40%), Gaps = 3/230 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+ ++ K A +L+ + +S N + Y+ +++ + +VGQ++ + ++
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 259
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+N+ PD++T+N+ + + + K M G + V Y +L++ Y
Sbjct: 260 LENIKPDVYTFNILVDGFCKDGKMKEGKTVF-AMMMKQGIKPNVVTYCSLMDGYCLVKE- 317
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
VN S L + +Y+ LI + + D+ ++K + Y
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNS 377
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ LG + +++D+ DI + +L A +KA
Sbjct: 378 LIDGLCKLGKISYALKLVDEMHDRGVPP-DIITYSSILDALCKNHQVDKA 426
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 4/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ +Y ++A L+ERVKQ+ + + Y M+ L+ G + + EE+
Sbjct: 115 TYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEM 174
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD YN+ I+ + K +EM G + V ++ Y +
Sbjct: 175 KGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEME-REGVKPNAVTLSTVMETYSRCGN 233
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ E + + + I Y+ ++ + G + +Q + + + + Y
Sbjct: 234 VM--EGLEVFQRLRQGVACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQPNDWTYR 291
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++S Y G E Q + A D+ A LL A+ + K E +
Sbjct: 292 NMISVYAKKGMAVEAHRTFSQMVE-AGYQIDVMAYTSLLQAYGNAKEYNKVQEILDEMTS 350
Query: 266 KNCAP 270
NCAP
Sbjct: 351 VNCAP 355
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/248 (17%), Positives = 100/248 (40%), Gaps = 6/248 (2%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY +L L G +W E ++++ E + +++ + + Y+ +++ + +
Sbjct: 45 TYNVMLKVLRRGRQW-EFSQQIAEDMANADVRPDNITYSTLISCANRCNYQDAAMAWFDR 103
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ VPD+ TY+ I D+ + + +G D V Y +V ++ A
Sbjct: 104 MHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVK-QAGWKPDKVTYGTMVRLFGRAG 162
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + A S E + S Q I Y+ +I G ++++ + K +
Sbjct: 163 Y-IRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTL 221
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ +Y G++ E E+ + +Q D + N +L + GL +A ++ +
Sbjct: 222 STVMETYSRCGNVMEGLEVFQRLRQGVACDVIVY--NAVLKMCREAGLASEAEQYLREMT 279
Query: 265 QKNCAPTN 272
+ P +
Sbjct: 280 ESGHQPND 287
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+ A+ +F + S +A+ Y ++ Y +G++E+ ++ E++R V PD+ TYN++
Sbjct: 686 DHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVF 745
Query: 101 ISSCAATLNID----QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVE 156
I+ C +D +K+ +D SC+ W+ + + + + +H V+
Sbjct: 746 INGCGHMGYMDCAFSTLKRMIDA-SCEPNYWTYWLLLKHFLKMSLANAHYVDT------- 797
Query: 157 AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKM--TSRNYICILSSYLM 213
+G+ N K+D +W+ L RM K + T+ Y I++ +
Sbjct: 798 --------------------SGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCK 837
Query: 214 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
L+E ++D S + L+ D+ L EKA F
Sbjct: 838 ATRLEEACVLLDHMLGKDISPNE-EIYTMLIKCCCDIKLFEKAASF 882
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 106/275 (38%), Gaps = 14/275 (5%)
Query: 4 VFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNL 55
++G+ ++ + + L K E TYT L+ + A LFE ++Q+ L
Sbjct: 504 IYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 563
Query: 56 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
+ + YN + G+ E+ + +K VV TY + + N +
Sbjct: 564 TPDEQAYNVLTDALCKSGRAEE---AYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAA 620
Query: 116 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 175
+++M + G D Y L+ L N S L + + + Y +I
Sbjct: 621 LIEKMV-NEGCKADSHTYSVLLQALCKQKKL-NEALSILDQMTLRGVKGNIVAYTIIISE 678
Query: 176 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
G D ++ + + K ++ Y +SSY +G ++E G +I + +++ +
Sbjct: 679 MIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAP- 737
Query: 236 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
D+ N + +G + A ++ +C P
Sbjct: 738 DVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEP 772
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 96/249 (38%), Gaps = 12/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT L+ + +A L + Q S N Y ++ G++ ++++E+
Sbjct: 255 SYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEM 314
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ VVP ++TYN I + + M + DDW Y +L++
Sbjct: 315 PRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWT-YNSLIH------G 367
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L + E R + IT+ +I Y D ++ + +K K+
Sbjct: 368 LCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
+ Y ++S + LKE + +++ + S ++ ++ A+ VG A E
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSP-NVVIYTSIIDAYCKVGKVGAALEVFK 486
Query: 262 LLLQKNCAP 270
L + C P
Sbjct: 487 LTEHEGCRP 495
>gi|255554390|ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542581|gb|EEF44120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 932
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 109/245 (44%), Gaps = 15/245 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTA++ + ++A +F+ V+ + + +Y ++ + G ++ ++EE+
Sbjct: 327 TYTAIILGFCRKGKIDEAFAIFKLVENLGIKLDEFIYAILVDGFCLKGDFDRAYQLIEEM 386
Query: 86 KRKNVVPDIFTYNLWISS-CAA--TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
++K + P I YN+ I+S C A T + D+V K L D + Y L++ YI
Sbjct: 387 EKKGITPTIVAYNILINSLCKAGRTFDADEVSKAL---------QGDKITYSALLHGYIK 437
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ + E++ Q I ++ ++ +G + + ++ ++ S
Sbjct: 438 EENSIGI-LEVRQRLEEARIQMDIIMFNIILKALFVVGAFEDVLVLYNGMQEMNLVANSI 496
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y I+ + +G + E EI D+++ S ++ N ++ G+ + A E +
Sbjct: 497 TYCTIIGGFCKVGRIDEALEIFDEFRHGLGS--SVACYNCMINGLCKNGMVDMAAEIFVE 554
Query: 263 LLQKN 267
L++K
Sbjct: 555 LIEKG 559
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 98/232 (42%), Gaps = 8/232 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT L+ ++ EK+ + + N + Y ++ + G++++ + + ++
Sbjct: 293 YTILIDGFSKEGSVEKSVGFLHHMLANGSEPNLVTYTAIILGFCRKGKIDEAFAIFKLVE 352
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ D F Y + + + D+ + ++EM G + V Y L+N A
Sbjct: 353 NLGIKLDEFIYAILVDGFCLKGDFDRAYQLIEEME-KKGITPTIVAYNILINSLCKAGRT 411
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
+A+ E K++ Q ITY L+ Y N I ++ + L + +M +
Sbjct: 412 FDAD-----EVSKAL-QGDKITYSALLHGYIKEENSIGILEVRQRLEEARIQMDIIMFNI 465
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
IL + ++G ++V + + ++ I+ C ++G F VG ++A E
Sbjct: 466 ILKALFVVGAFEDVLVLYNGMQEMNLVANSITYCT-IIGGFCKVGRIDEALE 516
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ Y ++L T +A EL +V + +S + +MYN +++ + QV + + E+
Sbjct: 442 DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 501
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K+ PDIFTYN+ ISS + + + +E+ S D + Y +L+N
Sbjct: 502 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELE-SSDCKPDIISYNSLINCLGKNG 560
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL--RMTKQ 197
+ A L +K + +TY LI + G DK+ ++ +SL RM Q
Sbjct: 561 DVDEAHMRFLEMQDKGLNP-DVVTYSTLIECF---GKTDKV-EMARSLFDRMITQ 610
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + E++ LFE + + N + YN M+ G V+K L+ +
Sbjct: 306 TYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNM 365
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ N P+ FTY++ ++ A + ++ + L+
Sbjct: 366 IKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE 398
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ Y K KA+ +F + Q ++ N Y+ M+ + + +V++ + +E+
Sbjct: 319 TYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
N++PD+ TYN I I K +DEM D G D + Y ++++ + +H
Sbjct: 379 HCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH-DRGVPHDKITYNSILDA-LCKNH 436
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
V+ + L + + Q TY L+
Sbjct: 437 QVDKAIALLTKMKDEGIQPDICTYTTLV 464
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ + + ++A+ + + + + + YN +M Y V +V K + I
Sbjct: 284 TFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI 343
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ V P+I +Y++ I +D+ EM C++ D V Y +L++
Sbjct: 344 SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN-IIPDVVTYNSLID 395
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L++ T A +L RV + N +MYN ++ V V + + E+
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD+ TYN IS + ++M ++ + + + LV+ +
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNI-LVDGFCKERR 297
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A++ + ++ I + TY+ L+ Y + +K I+ ++ Q+ + N
Sbjct: 298 LKEAKNVLAMMMKQGI-KPDVFTYNSLMDRYCLVKEVNKAKHIFNTI---SQRGVNPN-- 351
Query: 206 CILSSYLMLGH----LKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVG 251
+ SY ++ H +K+V E ++ +K+ ++ D+ N L+ +G
Sbjct: 352 --IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLG 401
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 16/259 (6%)
Query: 10 GERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+RYF EG+ T T+ ++ + + E A FE +K +S + + YN
Sbjct: 134 AKRYFNKMLSEGI---EPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNT 190
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
M+ Y V ++E+ E+K KN+ P + TY I + +D + ++EM
Sbjct: 191 MINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GY 249
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
G + + Y L+ A + A S +K I + LI + +GN D
Sbjct: 250 GIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDA 309
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW-------KQSATSDFDI 237
+ K++ + +Y ++ +Y G + +++D+ + +T +
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEP 369
Query: 238 SACNRLLGAFSDVGLTEKA 256
SA N ++ + G T KA
Sbjct: 370 SAYNPIVEYLCNNGQTSKA 388
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+T ++Y AL + A+ F ++ + +N M+ + G+VE
Sbjct: 113 RTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRF 172
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
E++K + + PD+ TYN I+ +++ +K+ EM V Y L+ Y+
Sbjct: 173 FEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMK-GKNIEPTVVTYTTLIKGYV 231
Query: 142 TASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ + +A LVE K + ITY L+ GL N +K+ + L+ K
Sbjct: 232 SVDQVDDA--LRLVEEMKGYGIKPNAITYSTLL---PGLCNAEKMSEARSILKEMVDKYI 286
Query: 201 SRN----YICILSSYLMLGHLKEVGEII 224
+ ++ ++SS+ +G+L +++
Sbjct: 287 APTDNSIFMRLISSHCKVGNLDAAADVL 314
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 106/248 (42%), Gaps = 3/248 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY AL++ + E AE L ++ + N +++N M+ Y G VEK +
Sbjct: 289 RTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAV 348
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+++ + DI+TYN ++ KK L M+ + G + ++V Y L++I+
Sbjct: 349 MEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA-EKGVAPNYVSYTTLISIHAKEG 407
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+V A + E ++ +TY+ +I Y G+ + ++ K + Y
Sbjct: 408 DMVEAR-RLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTY 466
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ + + G + + ++ K T ++ A L+ + G +E+A + + +L
Sbjct: 467 AGLVHGHCVNGKVDVALRLFEEMKHRGTKP-NVVAYTALVSGLAKEGRSEEAFQLYDDML 525
Query: 265 QKNCAPTN 272
P +
Sbjct: 526 AAGLTPDD 533
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 94/230 (40%), Gaps = 3/230 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+ A L + + + + NA YN ++ Y + VA +++E++ + V P + TY +
Sbjct: 165 DDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTIL 224
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ + +I +V+ DEM + D + Y ++N Y ++ A S E
Sbjct: 225 VDGLSRAGDISKVEAVYDEMKRKNVAGDVYF-YSAVINAYCRGGNVRRA-SEVFDECVGH 282
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ TY LI + +G + + + +++ + ++ Y G +++
Sbjct: 283 GVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKA 342
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
EI ++ + DI N L V E A + ++ +K AP
Sbjct: 343 LEIKAVMEKMGI-ELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAP 391
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/196 (16%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+A+++ Y +A E+F+ + N Y ++ + +GQ+E +++ +++
Sbjct: 256 YSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQ 315
Query: 87 RKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ V + +N I ++ ++K +++M + D Y L
Sbjct: 316 LRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIEL----DIYTYNTLACGLCRV 371
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ + +A+ + AEK + +++Y LI ++A G+ + ++++ + + +
Sbjct: 372 NRMEDAKKLLHIMAEKGVAP-NYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVT 430
Query: 204 YICILSSYLMLGHLKE 219
Y ++ Y+ G ++E
Sbjct: 431 YNVMIDGYIKNGSIRE 446
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +LL Y + + L + ++ + Y ++ G + KV V +E+K
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
RKNV D++ Y+ I++ N+ + + DE
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDE 278
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 81/211 (38%), Gaps = 35/211 (16%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+L+ G E A EL E + + YN ++ Y QV K +V +
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADF 418
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS--------------------CDSG 125
+ + VP+ TYN+ ++ C DQ ++LD+++ C G
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 478
Query: 126 GSDDWVKYVN--LVNIYITASHLVNAESSTLVEAEKSITQRQWI-------------TYD 170
+DD V++ + Y+ A+ L +A + + + T D
Sbjct: 479 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 538
Query: 171 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
++ Y G K D++ LR+ K +S
Sbjct: 539 AVVSAYCRAGMIQKADELASELRLYTDKSSS 569
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 87/233 (37%), Gaps = 44/233 (18%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV-EKVALVVEEIKRKNVVPDIFTYNL 99
+ A EL E + ++ NA+ Y+ ++ ++ E VAL++ E+ R+ PDI TY+
Sbjct: 201 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYST 260
Query: 100 WISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE 158
I C A D V F +EMSC
Sbjct: 261 VIDGLCKAGRLRDAVDIF-EEMSCAP---------------------------------- 285
Query: 159 KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 218
ITY+ LI Y G+ D+ ++ + Y ++S++ +G L
Sbjct: 286 ------TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLD 339
Query: 219 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
+ E+ Q + S D+ L+ G E A E + ++ C PT
Sbjct: 340 DAYELFQQMVANKLSP-DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + + A ELF+++ + LS + + + ++ G++E ++EEI
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 127
R+ P I+TYN + + + + ++ + + C +G +
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443
Query: 128 DDWVKYVNLVN 138
D ++Y++ +N
Sbjct: 444 DQALQYLDQLN 454
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 74/172 (43%), Gaps = 5/172 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A T+ TY +L+ Y A ++A L ++ N + + + Y +M+ + +G+++
Sbjct: 284 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYE 343
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ +++ + PD+ T+ + ++ + L+E++ G Y +V+ Y
Sbjct: 344 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT-RRGCPPTIYTYNCVVDGY 402
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
++ + AE + +TY+ L+ AG + DQ + L
Sbjct: 403 CKSNQVRKAEELVADFRSRGFVP-NTVTYNILV---AGCCRAGRTDQALQYL 450
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ LYA ++A LF +++ +A +YN ++ + GQ ++E
Sbjct: 11 NDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LVTHNIVL 123
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYD-----FLIILYAGLGNKDKIDQIWKSLRMTKQK 198
S L N + + I + +T D +I +G + +++ S+R + K
Sbjct: 124 SALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTK 183
Query: 199 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y I+ SY + G ++ I D +I A N LLGA++ G+ +A
Sbjct: 184 CPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKP-NIVAYNSLLGAYASRGMHREA 242
Query: 257 NEFHMLLLQKNCAP 270
L+ + P
Sbjct: 243 LAIFNLIKKNGLRP 256
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 55/93 (59%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+LL+ Y + EKA E+F ++K+++ N + YN ++ Y S G +++ ++ E+
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
++ + PD+ + + +++C I +++ L+
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILE 352
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + I
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLI 249
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + PDI +Y +++ + ++ ++ ++M +S + V Y L++ Y +A
Sbjct: 250 KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK-VSYNALIDAYGSAGM 308
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L E EK Q ++ L+ +I+ I ++ R + + Y
Sbjct: 309 LKEA-VGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYN 367
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ SYL G ++ E+ ++S D N L+ S +G
Sbjct: 368 SGIKSYLSFGDYEKALELYTSMRESNVKP-DAVTYNILISGSSKLG 412
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 26 TYTALLHLY-AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TYT L+ Y AG W ++A +LF+ ++ + + +A++ + +M + G+ E+V ++E
Sbjct: 458 TYTTLIQAYNAGGGW-KRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEF 516
Query: 85 IKRKNVVPDIFTYNLWISSC 104
+K+K++ + +Y I+SC
Sbjct: 517 MKKKSIPLNQKSYFEIIASC 536
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT LL+ Y + EKA E F+ +++++ N + YN ++ Y S G ++ ++ E+
Sbjct: 404 SYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEM 463
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ + PD+ + + +++C I ++ L E + G + V Y + + Y+
Sbjct: 464 EKDGIPPDVVSISTLLTACGRCRQITKIDTIL-EAAKSRGIKLNIVCYNSGIGSYLNFGD 522
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A V ++ +TY+ LI +G + + ++ + + +T Y
Sbjct: 523 YGKALELYAVMMASNVNPDA-VTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYS 581
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
++ SY+ G L E K+S D+ ++ A++D G
Sbjct: 582 SLICSYVKQGKLTEAESTFSSMKESGCLP-DVLTYTAMIEAYNDDG 626
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 106/254 (41%), Gaps = 15/254 (5%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ L+A ++A LF +++ +A +YN ++ + GQ +++
Sbjct: 155 NDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMD 214
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ R + P TYN I++C A N + + +M+ + G D LV I
Sbjct: 215 DMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPD-------LVTHNIVL 267
Query: 144 SHLVNAESSTLVEAEKSITQRQWI---TYDFLIILYAGL--GNKDKIDQIWKSLRMTKQK 198
S N + A + + I T+ I+++ + G + ++ S+R + +
Sbjct: 268 SAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQ 327
Query: 199 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y I+ SY + G +++ + D +I + N LLGA++ G+ A
Sbjct: 328 CPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKP-NIVSYNALLGAYASRGMHADA 386
Query: 257 NEFHMLLLQKNCAP 270
LL Q P
Sbjct: 387 LGIFKLLKQNGLRP 400
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 4/195 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ALL YA A +F+ +KQ+ L + + Y ++ Y GQ EK +E+
Sbjct: 369 SYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEM 428
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ + P+I +YN I + + + L EM D G D V L+
Sbjct: 429 RKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKD-GIPPDVVSISTLLTACGRCRQ 487
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ + T++EA KS + + Y+ I Y G+ K +++ + + + Y
Sbjct: 488 ITKID--TILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTY 545
Query: 205 ICILSSYLMLGHLKE 219
++S +G E
Sbjct: 546 NILISGLCKVGKYAE 560
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 13/231 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++H Y E + +F+ + + N + YN ++ Y S G + + +
Sbjct: 334 TYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLL 393
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + PD+ +Y +++ + ++ ++ EM +S + V Y L++ Y +A
Sbjct: 394 KQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNS-CRPNIVSYNALIDAYGSAGM 452
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A S L E EK ++ L+ KID I L K + N +
Sbjct: 453 FKEA-ISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTI---LEAAKSRGIKLNIV 508
Query: 206 CI---LSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVG 251
C + SYL G + G+ ++ + S+ + A N L+ VG
Sbjct: 509 CYNSGIGSYLNFG---DYGKALELYAVMMASNVNPDAVTYNILISGLCKVG 556
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 102/254 (40%), Gaps = 15/254 (5%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y +L+H +A A A + + + ++ + + YN ++ + G +K + +
Sbjct: 190 ADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCK 249
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV------ 137
++ R V PD+ T+N+ +S+ + + + M + D + +N+V
Sbjct: 250 KMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFT--LNIVIHCLVK 307
Query: 138 -NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
Y A L+N+ + + +TY ++ Y G + ++ +
Sbjct: 308 DGQYGEAIELLNSMREKRTQCPPDV-----VTYTSIMHSYYVCGKVEDCKAVFDMMVAEG 362
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
K +Y +L +Y G + I KQ+ D+ + LL A+ G EKA
Sbjct: 363 VKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRP-DVVSYTTLLNAYGRSGQPEKA 421
Query: 257 NEFHMLLLQKNCAP 270
E + + +C P
Sbjct: 422 REAFKEMRKNSCRP 435
>gi|357487221|ref|XP_003613898.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515233|gb|AES96856.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 807
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY L+ +Y A + E+F ++ + ++ + +N M+ LY + G++ +V+L+++
Sbjct: 271 SHTYNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLLQ 330
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ PD TYN+ IS NI K+L +M ++ D V Y L+ Y T
Sbjct: 331 RMEELRCPPDTRTYNILISVLVKHNNIKLAAKYLMKMK-EAFLEPDLVSYRTLLYAYSTR 389
Query: 144 SHLVNAE 150
+ AE
Sbjct: 390 KMVQEAE 396
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 119/238 (50%), Gaps = 11/238 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y++L+H+ A A A+ +++++ L + ++Y +++ ++ + Q++ + E+
Sbjct: 516 SYSSLIHILASADKPHIAKPYLNKMQEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEM 575
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V PD Y++ I++ A N+ + +LD M ++G + Y +L+ +Y +
Sbjct: 576 IGHTVKPDAIIYSVLINAFADVGNVIKATGYLDRMR-NAGFVGNQAIYNSLMKLYTKIGY 634
Query: 146 LVNAESS-TLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR- 202
L A+ + TL++ S+ Q + + + +I LY ++ +I++SL+ K + +
Sbjct: 635 LKEAQQTYTLLQ---SLDQAPSVFSSNCMIDLYTERLMVEQAKEIFESLK--KNNIANEF 689
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS-DVGLTEKANEF 259
+Y +L Y +G L E +I Q ++ D+ + N +LG +S D L E F
Sbjct: 690 SYAMMLCMYKKIGRLDEAFQIAKQMRKQGLLT-DLLSYNNVLGLYSMDRRLREAKETF 746
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 72/176 (40%), Gaps = 26/176 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFER------------------------VKQSNLSFNALM 61
T ++ LY A+ +KAEE F + V N+ N+
Sbjct: 214 TMGVVVQLYKRAREFQKAEEFFRKWSRGEPLVIAIDHNTVDVRHVCNEVSHVNVCLNSHT 273
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN ++ +Y GQ++ V + ++ ++ V P T+N I I +V L M
Sbjct: 274 YNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLLQRME 333
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
+ D Y L+++ + ++ + + L++ +++ + ++Y L+ Y+
Sbjct: 334 -ELRCPPDTRTYNILISVLVKHNN-IKLAAKYLMKMKEAFLEPDLVSYRTLLYAYS 387
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ ++ ++AE +F+ + + +A+ YN ++ + G VE+V V EE+
Sbjct: 330 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 389
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ D TYN I +D DEM G + D V Y LV+
Sbjct: 390 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 448
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L E + + +T+ LI YA G +D ++ + + + K Y+
Sbjct: 449 ISEA-GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYL 507
Query: 206 CILSSY 211
+L +
Sbjct: 508 VMLDVF 513
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A EL V+Q+ L +A+ YN +++ ++ V EE+ PD++TYN +S
Sbjct: 277 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 336
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
+ + E+ + G D V Y +L+ + + E E K+
Sbjct: 337 VHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE-RVCEELVKAGF 394
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
++ ITY+ +I +Y +G D ++ +R + Y ++ S + + E G+
Sbjct: 395 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 454
Query: 223 IIDQ 226
++++
Sbjct: 455 VLEE 458
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + + A +FE + S + YN M++++ G+ ++ L+ +E+
Sbjct: 295 TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL 354
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K PD TYN + + A ++++V++ +E+ +G D + Y ++++Y
Sbjct: 355 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL-VKAGFRKDGITYNTMIHMYGKMGR 413
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
L A L + ++I +TY +L LG D+I + K L
Sbjct: 414 LDLALG--LYDEMRAIGCTPDAVTY---TVLVDSLGKMDRISEAGKVL 456
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E+Y LL AK E+A+ LFE ++ N +Y+ MM +Y + K ++
Sbjct: 993 ESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSA 1052
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+K + P I T ++ ++S + + D+ +K L+ +
Sbjct: 1053 MKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSL 1088
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
LL +Y G ++ E++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 928 LLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRG 987
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
+ P + +Y + +++ +Q +EM G + Y ++ IY A + A
Sbjct: 988 LTPKLESYKILLAASGKAKLWEQADLLFEEMRT-KGYRLNRSIYHMMMKIYRNARNHSKA 1046
Query: 150 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 209
E E I + T L+ Y G+ D+ +++ SL+ + ++++ Y +L
Sbjct: 1047 EHLLSAMKEDGI-EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 1105
Query: 210 SYL 212
+YL
Sbjct: 1106 AYL 1108
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++H+Y + A L++ ++ + +A+ Y ++ + ++ + V+EE+
Sbjct: 400 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 459
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P + T++ I + A + D ++ D M +SG D + Y+ +++++ +
Sbjct: 460 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM-VESGVKPDRLAYLVMLDVFARSD- 517
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQI 188
E+ L+ +++ + + D L +L A L ++ D+I
Sbjct: 518 ----ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 557
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 48/95 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++AL+ YA + + AE F+R+ +S + + L Y M+ ++ + K+ ++ +
Sbjct: 470 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAM 529
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ PD Y + +++ A D+++ + +M
Sbjct: 530 IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 564
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 16/251 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ A +A E + + +++ + ++N ++ G ++ + E +
Sbjct: 64 TFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM 123
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS-DDWVKYVNLVNIYITAS 144
+ V P+I TYN IS + N+++ ++ L+EM G S D V Y L+N + AS
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRAS 183
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLI--ILYAGL---GNKDKIDQIWKSLRMTKQKM 199
+ E+ E K+ I D L IL +G+ G+ ++ +I +++
Sbjct: 184 RI--REACAFREKMKA----AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVP 237
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
Y I+ + + G + E EI+ S D+ N LL F G+ +A E
Sbjct: 238 DVITYNSIIHALCVAGKVVEAAEILKTMSCSP----DLVTFNTLLDGFCKAGMLPRALEV 293
Query: 260 HMLLLQKNCAP 270
+ ++N P
Sbjct: 294 LEEMCRENILP 304
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ LL + A +A E+ E + + N+ + + Y ++ VGQV+ ++EEI
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R+ +PD+ Y + + I++ K + EMS G V Y +LV+ Y A +
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV-RGCRTGVVMYSSLVSGYCRAGN 391
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V+ L E TY+ + LG K I K++ + + +R Y+
Sbjct: 392 -VHKAREILAEMVSINMVPPLFTYNIV------LGGLIKDGSISKAVSLISD-LVARGYV 443
Query: 206 CILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
+ +Y L ++E ++ D+ D++ + + G VG + A
Sbjct: 444 PDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFG-LCRVGRVDDAWS 502
Query: 259 FHMLLLQKNCAP 270
+ + +K AP
Sbjct: 503 LVVEMSRKRHAP 514
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 22/260 (8%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 79
SA TY L++ + A +A E++K + ++ + L N +++ G VE+
Sbjct: 165 SAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEAL 224
Query: 80 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
+++ +K VPD+ TYN I + + + + L MSC S D V + L++
Sbjct: 225 EILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSC----SPDLVTFNTLLDG 280
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ A L A L E + ITY IL GL ++ Q+ + + +++
Sbjct: 281 FCKAGMLPRA-LEVLEEMCRENILPDVITY---TILVNGLC---RVGQVQVAFYLL-EEI 332
Query: 200 TSRNYICILSSYL-MLGHLKEVGEIIDQWKQSATSDFDISAC-------NRLLGAFSDVG 251
+ YI + +Y ++ L + GEI + K + + C + L+ + G
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHK--LVKEMSVRGCRTGVVMYSSLVSGYCRAG 390
Query: 252 LTEKANEFHMLLLQKNCAPT 271
KA E ++ N P
Sbjct: 391 NVHKAREILAEMVSINMVPP 410
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 7/181 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT+L+ + E+A +L + + +MY+ +++ Y G V K ++ E+
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
N+VP +FTYN+ + +I + + ++ G D V Y L++ A+
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA-RGYVPDVVTYNTLIDGLCKANR 461
Query: 146 LVNAESSTLVEAEKSITQRQWITYDF-LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A + + R D L + GL ++D W + +K + N
Sbjct: 462 VREA-----CDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNV 516
Query: 205 I 205
+
Sbjct: 517 V 517
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL+ +A +K E E++ ++ N + YN M+ +Y +G+++ + +E+
Sbjct: 365 TYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD TY + I S I + K L++M+ D+G + + L+ Y
Sbjct: 425 RAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMT-DAGLKPTLIAFSALICAYAKGGR 483
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+AE +T S + + Y ++ ++A G+ +K+ +++ + + Y
Sbjct: 484 RADAE-NTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQ 542
Query: 206 CILSSYLMLGHLKEVGEII 224
+L + +E+ E+I
Sbjct: 543 VLLVALAKEDKCEEIEEVI 561
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 4/208 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK-VAL- 80
T + + A++ +YA + + A +L + + + + + +N ++ G + VAL
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+++ + PD+ TYN IS+C+ + N++ ++M D W Y +V+++
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWT-YNAMVSVH 338
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
AE EK ITY+ L+ +A GN DK++ + L K
Sbjct: 339 GRCGKAEEAERLFRELVEKGFMP-DAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKN 397
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWK 228
Y ++ Y +G L + D+ +
Sbjct: 398 EITYNTMIHMYGKMGRLDLAVGLYDEMR 425
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 2/190 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ ++ E+AE LF + + +A+ YN ++ + G V+KV E++
Sbjct: 330 TYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQL 389
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + TYN I +D DEM G + D V Y +++ +
Sbjct: 390 VKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRA-MGCTPDAVTYTVMIDSLGKMNR 448
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L + + + I + LI YA G + + + + + K Y+
Sbjct: 449 IAEA-GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYL 507
Query: 206 CILSSYLMLG 215
+L + G
Sbjct: 508 VMLDVFARSG 517
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
ALL++Y A ++ +++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 925 ALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKR 984
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
+ P + +Y +++ A +Q + +EM S + + Y ++ IY A +
Sbjct: 985 GLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSI-YHMMMKIYRNAGNHSK 1043
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
AE+ V E I + T L+ Y G + + + +L+ + ++++ Y +
Sbjct: 1044 AENLLAVMKEDGI-EPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVF 1102
Query: 209 SSYLMLG 215
+YL G
Sbjct: 1103 DAYLKNG 1109
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ AL+H YA + EKA +F+ + ++ N MM + G+++++ +VVEE++
Sbjct: 783 WNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQ 842
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
N T L + + A ++ +V K + M +G + Y +++++ +
Sbjct: 843 DMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKA-AGYLPNMHLYRSMISLLCHHNRF 901
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ E + E E + + + L+ +Y GN D+ Q+++S+
Sbjct: 902 RDVE-LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSI 946
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
EKA ++ + + + Y+E++ + +VE + +E+K VVPD++TY +
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL-VNAESSTLVEAEK 159
I + I Q +LDEM D G V Y L++ Y+ A + V E L+ A+
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
ITY LI Y GN +K QI+ +R
Sbjct: 590 CFP--NVITYTALIDGYCKSGNIEKACQIYARMR 621
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 101/270 (37%), Gaps = 29/270 (10%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TYT L+H Y AK A ELFE + N + Y ++ Y G +EK +
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 82 VEEIK--------------RKNVV--PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
++ + NV P++ TY + + + L+ M D G
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVD-G 675
Query: 126 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
+ + Y L++ + A+ L A+ E+ + TY LI L ++
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVY-TYSSLI---DRLFKDKRL 731
Query: 186 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISAC 240
D + K L + + N I I + M+ L +V + + +K + ++
Sbjct: 732 DLVLKVLSKMLENSCAPN-IVIYTE--MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++ F G +K E + K CAP
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ A + A +L E + N ++Y+ ++ + ++++ V ++
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P+++TY+ I +D V K L +M ++ + + V Y +++ +
Sbjct: 707 VERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM-LENSCAPNIVIYTEMIDGLSKVAK 765
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A L+ EK + +TY +I G G K+D+ + R K + N++
Sbjct: 766 TDEAYKLMLMMEEKG-CKPNVVTYTAMI---DGFGKAGKVDKCLELFREMGSKGCAPNFV 821
Query: 206 ---CILSSYLMLGHLKEVGEIIDQWKQS 230
+++ GHL E ++++ KQ+
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQT 849
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S Y +++ L +AEE F + + + + ++Y ++ + G + +
Sbjct: 759 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ +++ PD+ TY IS ++ + K EM C G D V + L+N Y A
Sbjct: 819 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC-KGLEPDSVTFTELINGYCKA 877
Query: 144 SHLVNA--ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
H+ +A + +++A S +TY LI G+ D +++ + +
Sbjct: 878 GHMKDAFRVHNHMIQAGCS---PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y I++ G+++E +++ ++ ++A + D L+ A+ G +KA E
Sbjct: 935 FTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 993
Query: 262 LLLQKNCAPT 271
+L K PT
Sbjct: 994 EMLGKGLQPT 1003
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/234 (17%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ++H ++A L ++ + + + Y+ ++ Y G+++KV ++E +
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KRK + P+ + Y I + + ++ EM G D V Y L++ +
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGD 809
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E +TY +I + +G+ + +++ + + S +
Sbjct: 810 -IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 868
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+++ Y GH+K+ + + Q+ S ++ L+ G + ANE
Sbjct: 869 ELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANEL 921
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 104/272 (38%), Gaps = 11/272 (4%)
Query: 5 FGI-HSGERYFE-----GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
FG+ R FE GL LS + Y L L T A +F + + +N
Sbjct: 631 FGLLREARRVFEKMLNYGLVLSVDSCNVY--LTRLSKDCYKTATAIIVFREFPEVGVCWN 688
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
YN ++ +G++++ ++ ++ K PD+ +Y+ ++ +D+V K ++
Sbjct: 689 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 748
Query: 119 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 178
M + ++ Y +++ + L AE + E + + Y LI +
Sbjct: 749 VMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEA-FSEMIRQGILPDTVVYTTLIDGFCK 806
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
G+ + + + Y I+S + +G + E G++ + D
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP-DSV 865
Query: 239 ACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
L+ + G + A H ++Q C+P
Sbjct: 866 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 897
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE L+A T TYT L+ Y + +KA+E+ + + L + +N +M + G
Sbjct: 960 FEAAGLNADTV-TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+E ++ + K + P+ T+N + N+ +M C G D Y
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM-CSRGVGPDGKTY 1077
Query: 134 VNLVNIYITASHLVNA 149
NLV + A ++ A
Sbjct: 1078 ENLVKGHCKARNMKEA 1093
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
EKA ++ + + + Y+E++ + +VE + +E+K VVPD++TY +
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL-VNAESSTLVEAEK 159
I + I Q +LDEM D G V Y L++ Y+ A + V E L+ A+
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKG 589
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
ITY LI Y GN +K QI+ +R
Sbjct: 590 CFP--NVITYTALIDGYCKSGNIEKACQIYARMR 621
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ + T++A +L +++ N + Y M+ + G+V+K + E+
Sbjct: 753 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 812
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K P+ TY + I+ C AT ++D+ L+EM
Sbjct: 813 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 100/270 (37%), Gaps = 29/270 (10%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TYT L+H Y AK A ELFE + N + Y ++ Y G +EK +
Sbjct: 557 PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQI 616
Query: 82 VEEIK--------------RKNVV--PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
++ + NV P++ TY + + + L+ M D G
Sbjct: 617 YARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVD-G 675
Query: 126 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
+ + Y L++ + A+ L A+ E + TY LI L ++
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVY-TYSSLI---DRLFKDKRL 731
Query: 186 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISAC 240
D + K L + + N I I + M+ L +V + + +K + ++
Sbjct: 732 DLVLKVLSKMLENSCAPN-IVIYTE--MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788
Query: 241 NRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++ F G +K E + K CAP
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAP 818
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ A + A +L E + N ++Y+ ++ + ++++ V ++
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P+++TY+ I +D V K L +M ++ + + V Y +++ +
Sbjct: 707 VEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM-LENSCAPNIVIYTEMIDGLSKVAK 765
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A L+ EK + +TY +I G G K+D+ + R K + N++
Sbjct: 766 TDEAYKLMLMMEEKG-CKPNVVTYTAMI---DGFGKAGKVDKCLELFREMGSKGCAPNFV 821
Query: 206 ---CILSSYLMLGHLKEVGEIIDQWKQS 230
+++ GHL E ++++ KQ+
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEMKQT 849
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 111/257 (43%), Gaps = 17/257 (6%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ + +++ Y A A + F R+K+ ++ + + N ++ +++ + V ++
Sbjct: 87 DVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLK 146
Query: 84 EIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
K K V+P++F++N+ I + +++ K DEM G + V Y ++ +++
Sbjct: 147 NCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPT-MGMIPNLVTYTTILGGFVS 205
Query: 143 ASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
LVNAE + I+ + W+ TY L++ Y G ++ ++ +
Sbjct: 206 RGDLVNAE-----KVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVE 260
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQW--KQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y ++ +Y E +ID K+ S + C +++ + G E A
Sbjct: 261 PNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSS---TLCCKVIDVLCEDGKVENA 317
Query: 257 NEFHMLLLQKNCAPTNA 273
+L+KNC P NA
Sbjct: 318 CHLWKRMLEKNCLPDNA 334
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM-SVGQVE 76
P + Y A++ +Y+ + KA+EL + ++Q + + +N ++ + S G
Sbjct: 219 PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP 278
Query: 77 KVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
+A+ +++ ++ + PD TYN +S+C+ N+D K ++M D W Y
Sbjct: 279 NLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT-YNA 337
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-- 193
++++Y AE +E E +TY+ L+ +A N +K+ ++++ ++
Sbjct: 338 MISVYGRCGLAAEAE-RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 194 -MTKQKMTSRNYICILSSYLMLGHL 217
K +MT Y I+ Y G L
Sbjct: 397 GFGKDEMT---YNTIIHMYGKQGQL 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +Y + +K ++++R+K++ L + YN ++ +Y + E+ L++++++
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P + TY IS+ ++Q ++ +E+ G D Y ++ I +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE L + + + T L++ Y+ GN + +++ +L+ T+ ++T+ Y
Sbjct: 1049 SKAE-KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 207 ILSSYL 212
++ +YL
Sbjct: 1108 VIDAYL 1113
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ +Y +AE LF ++ +A+ YN ++ + EKV V +++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ D TYN I +D + +M SG + D + Y L++ A+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V A ++ + E + TY LI YA G +++ + + + + K + Y
Sbjct: 454 TVEA-AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 206 CILSSYL 212
+L L
Sbjct: 513 VMLDVLL 519
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ + K E+AE+LFE + L + Y+ MM + G K +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K + P + T +L + S +++ N + +K L + D+ + Y ++++ Y+ +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK-DTEVELTTLPYSSVIDAYLRS 1115
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 99/244 (40%), Gaps = 8/244 (3%)
Query: 32 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 91
L +G A EL + V+ S L +A+ YN +++ ++ V E+++
Sbjct: 270 RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQ 329
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 151
PD++TYN IS + ++ E+ G D V Y +L+ + N E
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELEL-KGFFPDAVTYNSLLYAFARER---NTEK 385
Query: 152 STLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNYICIL 208
V + +K + +TY+ +I +Y G D Q++K ++ ++ + + Y ++
Sbjct: 386 VKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLI 445
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
S E ++ + + + L+ ++ G E+A + +L+
Sbjct: 446 DSLGKANRTVEAAALMSEMLDVGIKP-TLQTYSALICGYAKAGKREEAEDTFSCMLRSGT 504
Query: 269 APTN 272
P N
Sbjct: 505 KPDN 508
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T Y ++ L K AE + ++++N ++N M+ +Y ++ +K V
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY 950
Query: 83 EEIKRKNVVPDIFTYNLWI 101
+ IK + PD TYN I
Sbjct: 951 QRIKETGLEPDETTYNTLI 969
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ ++ ++AE +F+ + + +A+ YN ++ + G VE+V V EE+
Sbjct: 170 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 229
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ D TYN I +D DEM G + D V Y LV+
Sbjct: 230 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRA-IGCTPDAVTYTVLVDSLGKMDR 288
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A L E + + +T+ LI YA G +D ++ + + + K Y+
Sbjct: 289 ISEA-GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYL 347
Query: 206 CILSSY 211
+L +
Sbjct: 348 VMLDVF 353
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A EL V+Q+ L +A+ YN +++ ++ V EE+ PD++TYN +S
Sbjct: 117 ALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 176
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
+ + E+ + G D V Y +L+ + + E E K+
Sbjct: 177 VHGRCGKAQEAELMFKEL-VEKGFQPDAVTYNSLLYAFAKEGDVERVE-RVCEELVKAGF 234
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
++ ITY+ +I +Y +G D ++ +R + Y ++ S + + E G+
Sbjct: 235 RKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGK 294
Query: 223 IIDQ 226
++++
Sbjct: 295 VLEE 298
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + + A +FE + S + YN M++++ G+ ++ L+ +E+
Sbjct: 135 TYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKEL 194
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K PD TYN + + A ++++V++ +E+ +G D + Y ++++Y
Sbjct: 195 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL-VKAGFRKDGITYNTMIHMYGKMGR 253
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
L A L + ++I +TY +L LG D+I + K L
Sbjct: 254 LDLALG--LYDEMRAIGCTPDAVTY---TVLVDSLGKMDRISEAGKVL 296
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E+Y LL AK E+A+ LFE ++ N +Y+ MM +Y + K ++
Sbjct: 833 ESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSA 892
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+K + P I T ++ ++S + + D+ +K L+ +
Sbjct: 893 MKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSL 928
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKN 89
LL +Y G ++ E++ + ++ L + YN ++ +Y + E+ ++ E+ ++
Sbjct: 768 LLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRG 827
Query: 90 VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
+ P + +Y + +++ +Q +EM G + Y ++ IY A + A
Sbjct: 828 LTPKLESYKILLAASGKAKLWEQADLLFEEMRT-KGYRLNRSIYHMMMKIYRNARNHSKA 886
Query: 150 ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILS 209
E E I + T L+ Y G+ D+ +++ SL+ + ++++ Y +L
Sbjct: 887 EHLLSAMKEDGI-EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 945
Query: 210 SYL 212
+YL
Sbjct: 946 AYL 948
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++H+Y + A L++ ++ + +A+ Y ++ + ++ + V+EE+
Sbjct: 240 TYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 299
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P + T++ I + A + D ++ D M +SG D + Y+ +++++ +
Sbjct: 300 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM-VESGVKPDRLAYLVMLDVFARSD- 357
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQI 188
E+ L+ +++ + + D L +L A L ++ D+I
Sbjct: 358 ----ETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 397
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 48/95 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++AL+ YA + + AE F+R+ +S + + L Y M+ ++ + K+ ++ +
Sbjct: 310 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAM 369
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ PD Y + +++ A D+++ + +M
Sbjct: 370 IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 404
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 25/191 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQ-------SNLSFNA-----LM-----------Y 62
TYTAL++ +A EKAEE+FE++++ + + A LM Y
Sbjct: 311 TYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASY 370
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N M+ Y G V EE+KR + P + ++ L +S+ + ++ + + + EMS
Sbjct: 371 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMS- 429
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
++G D +++N+Y E L E E TY+ LI +Y G
Sbjct: 430 ENGVEPDTFVLNSMLNLYGRLGQFTKME-KILAEMENGPCTADISTYNILINIYGKAGFL 488
Query: 183 DKIDQIWKSLR 193
++I++++ L+
Sbjct: 489 ERIEELFVELK 499
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
E P +A S TY L+++Y A + E+ EELF +K+ N + + + + Y
Sbjct: 464 ENGPCTADIS-TYNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKL 522
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K + EE+ PD T + +S+C++ ++QV L M
Sbjct: 523 YVKCLEIFEEMIDSGCAPDGGTAKVLLSACSSEDQVEQVTSVLRTM 568
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 6 GIHS-GERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
G+HS E FE + A T +++ LL Y+ A+ K E + + + ++ + + +
Sbjct: 381 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVL 440
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N M+ LY +GQ K+ ++ E++ DI TYN+ I+ ++++++ E+
Sbjct: 441 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 498
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV-GQVEKVALV 81
T +TYT L+ Y A EKAE + ++ ++S + +YN + M G E+ V
Sbjct: 202 TEDTYTLLIKAYCMAGLIEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDV 261
Query: 82 VEEIKRKNVVPDIFTYNLWIS 102
+ +KR P TYNL I+
Sbjct: 262 FQRMKRDRCKPTTETYNLMIN 282
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 103/255 (40%), Gaps = 28/255 (10%)
Query: 40 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 99
TE+A ++F+R+K+ YN M+ LY + + E++ P+I TY
Sbjct: 255 TEQAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTA 314
Query: 100 WISSCAATLNIDQVKKFLDEMSCDS----------------------GGSDDWVKYVNLV 137
+++ A ++ ++ +++ D G D Y +V
Sbjct: 315 LVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 374
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ Y A +AE + E ++ ++ L+ Y+ + K + I K M++
Sbjct: 375 DAYGRAGLHSDAE-AVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVK--EMSEN 431
Query: 198 KMTSRNYI--CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
+ ++ +L+ Y LG ++ +I+ + + + DIS N L+ + G E+
Sbjct: 432 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINIYGKAGFLER 490
Query: 256 ANEFHMLLLQKNCAP 270
E + L ++N P
Sbjct: 491 IEELFVELKERNFKP 505
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 89/206 (43%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+HL + +A E++ R+ L + ++ +M E V ++EE+
Sbjct: 196 SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM 255
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+I+TY + I ID+ + + M D G D V Y L++ TA
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRME-DDGCGPDVVTYTVLIDALCTAGK 314
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A V+ + S + +TY ++ ++ G+ ++ + W + +
Sbjct: 315 LDDA-MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++++ G++ E ++D ++
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQG 399
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ A + A ELF ++K S+ + + Y M+ + G + +V E+
Sbjct: 301 TYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM 360
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ T+ + +++ NID+ LD M G + Y L++ + +
Sbjct: 361 EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMR-KQGVLPNLHTYNTLISGLLRVNR 419
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A E TY I Y G DK + ++ +++ + +
Sbjct: 420 LDDA-LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKI--RGIAPNIVA 476
Query: 206 CILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
C S Y + +G L+E I ++ K + + D N ++ +S G ++A E +
Sbjct: 477 CNASLYSLAEMGRLREAKVIFNRLKSNGLAP-DSVTYNMMMKCYSKAGQVDEAIELLSDM 535
Query: 264 LQKNCAP 270
+ C P
Sbjct: 536 SENQCEP 542
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++YT+L+ A + A FE++KQ+ L +++ YN M+ ++E+ + +E
Sbjct: 966 KSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDE 1025
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ + + PD+FTYN I + ++Q K +E+
Sbjct: 1026 MQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL 1061
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T+ TY + Y + ++KA E FE++K ++ N + N + +G++ + ++
Sbjct: 437 PTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVI 496
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+K + PD TYN+ + + +D+ + L +MS ++ D + +L+N
Sbjct: 497 FNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMS-ENQCEPDIIVINSLINTLY 555
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
A V+ + +TY+ LI AGLG + ++ +
Sbjct: 556 KAGR-VDEAWKMFCRLKDMKLAPTVVTYNTLI---AGLGKEGQVQR 597
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TY LL + E+A+ELFE + N +YN ++ + G V
Sbjct: 892 SPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACE 951
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + + R+ + PD+ +Y + +D + +++ +G D + Y NL+
Sbjct: 952 LFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK-QTGLYLDSIAY-NLMIDG 1009
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ SH + + E + TY+ LI+ G ++ ++++ L+ +
Sbjct: 1010 LGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPN 1069
Query: 201 SRNYICILSSYLMLGH 216
Y ++ Y M G+
Sbjct: 1070 VFTYNALIRGYSMSGN 1085
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 120/298 (40%), Gaps = 45/298 (15%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
EGL S KT ++AL+ + TE + L E ++ L N Y + + G
Sbjct: 222 LEGLKPSLKT---FSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAG 278
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
++++ +++ ++ PD+ TY + I + +D + +M S D V Y
Sbjct: 279 RIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS-HKPDRVTY 337
Query: 134 VNLVNIY-------------------------ITASHLVNA--ESSTLVEAEK--SITQR 164
+ +++ + IT + LVNA ++ + EA + ++
Sbjct: 338 ITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRK 397
Query: 165 QWI-----TYDFLIILYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGH 216
Q + TY+ LI +GL +++D ++ ++ T+ YI + Y G
Sbjct: 398 QGVLPNLHTYNTLI---SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGR 454
Query: 217 LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+ E ++ K + +I ACN L + +++G +A L AP + +
Sbjct: 455 SDKALETFEKMKIRGIAP-NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVT 511
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 2/166 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L++ + A ELF+R+ + + + Y ++ G+V+ E++K
Sbjct: 933 YNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK 992
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + D YNL I + I++ DEM G + D Y +L+ + + + +
Sbjct: 993 QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQ-SRGINPDLFTYNSLI-LNLGVAGM 1050
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
V E + + TY+ LI Y+ GN D ++K +
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ Y K KA+++F + Q ++ N YN M+ + + +V+K + E+
Sbjct: 350 TYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEM 409
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
K+++PD+ TYN I + I + ++EM D G + + Y +++N +T
Sbjct: 410 HHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMH-DRGQPPNIITYNSILNALLT 465
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 3/246 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ +LH + +A LF + N+ N + + ++ G V + V E +
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K P+ +TYN + +D+ +K LD M D G + Y L+N Y
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM-VDKGCAPVVHSYNILINGYCKRRR 387
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A+S + +EK +T +TY L+ +G + ++K + + Y
Sbjct: 388 LDEAKSLLVEMSEKELTP-DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYS 446
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L GHL E +++ ++S DI N L+ G E A E L
Sbjct: 447 TLLDGLCKHGHLDEALKLLKSMQESKIEP-DIVLYNILIEGMFIAGKLEVAKELFSKLFA 505
Query: 266 KNCAPT 271
PT
Sbjct: 506 DGIQPT 511
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A +Y L++ Y + ++A+ L + + L+ + + Y+ +M VG+ ++
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ +E+ ++PD+ TY+ + ++D+ K L M +S D V Y L+
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQ-ESKIEPDIVLYNILIEGM 487
Query: 141 ITASHL 146
A L
Sbjct: 488 FIAGKL 493
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 6/260 (2%)
Query: 14 FEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
F+ +P + +T +YTA+++ Y + EL +KQ +S + L YN ++
Sbjct: 157 FDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACAR 216
Query: 72 VG-QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
G E + + E++ + + PD+ TYN + +CA D+ + M+ +SG D
Sbjct: 217 GGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMN-ESGIVPDI 275
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
Y LV + + L S L E E +Y+ L+ YA LG+ + +++
Sbjct: 276 NTYSYLVQTFGKLNRLEKV-SELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFR 334
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
++ + Y +L+ Y G +V ++ + K S T D D N L+ F +
Sbjct: 335 QMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNT-DPDAGTYNILIQVFGEG 393
Query: 251 GLTEKANEFHMLLLQKNCAP 270
G ++ + ++N P
Sbjct: 394 GYFKEVVTLFHDMAEENVEP 413
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 20/258 (7%)
Query: 26 TYTALLHLYA--GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
TY +++ A G W E LF ++ + + + YN ++ G ++ +V
Sbjct: 206 TYNTVINACARGGLDW-EGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFR 264
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ +VPDI TY+ + + +++V + L EM C G D Y L+ Y
Sbjct: 265 TMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMEC-GGNLPDITSYNVLLEAY--- 320
Query: 144 SHLVNAESSTLVEAEKSITQRQ-------WITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
AE ++ EA Q Q TY L+ LY G D + ++ ++++
Sbjct: 321 -----AELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSN 375
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ Y ++ + G+ KEV + + ++ L+ A GL E A
Sbjct: 376 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEP-NMQTYEGLIFACGKGGLYEDA 434
Query: 257 NEFHMLLLQKNCAPTNAS 274
+ + + +K P++ +
Sbjct: 435 KKILLHMNEKGVVPSSKA 452
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 3/206 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+T ++ L +K E+F+ + + + Y ++ Y GQ ++ +K
Sbjct: 137 HTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMK 196
Query: 87 RKNVVPDIFTYNLWISSCA-ATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ V P I TYN I++CA L+ + + EM + G D + Y L+
Sbjct: 197 QERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDVITYNTLLGACAHRGL 255
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
AE E I TY +L+ + L +K+ ++ + + +Y
Sbjct: 256 GDEAEMVFRTMNESGIVP-DINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYN 314
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
+L +Y LG +KE + Q + +
Sbjct: 315 VLLEAYAELGSIKEAMGVFRQMQAAG 340
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 98/245 (40%), Gaps = 38/245 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ LL+LY + +LF +K SN +A YN ++ ++ G ++V + ++
Sbjct: 347 TYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM 406
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+NV P++ TY I +C + KK L M+ + G Y ++ + A+
Sbjct: 407 AEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMN-EKGVVPSSKAYTGVIEAFGQAA- 464
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
Y+ ++++ ++ T Y
Sbjct: 465 ----------------------LYEEALVMF-------------NTMNEVGSNPTVETYN 489
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ ++ G KE I+ + +S D+ + N ++ AF G E+A + ++ + +
Sbjct: 490 SLIHAFARGGLYKEAEAILSRMNESGLKR-DVHSFNGVIEAFRQGGQYEEAVKSYVEMEK 548
Query: 266 KNCAP 270
NC P
Sbjct: 549 ANCEP 553
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 79
S T ETY +L+H +A ++AE + R+ +S L + +N ++ + GQ E+
Sbjct: 481 SNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAV 540
Query: 80 LVVEEIKRKNVVPDIFTYNLWIS-SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
E+++ N P+ T +S C+A L +D+ ++ E+ SG + Y ++
Sbjct: 541 KSYVEMEKANCEPNELTLEAVLSIYCSAGL-VDEGEEQFQEIKA-SGILPSVMCYCMMLA 598
Query: 139 IYITASHLVNA 149
+Y L +A
Sbjct: 599 LYAKNDRLNDA 609
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY+ L+H + +A +F +++ L NA YN +++ G V+K + ++EE
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K + PDI TYN+ I I++ K D++ G + + V Y +V+ Y +
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVTYAAMVDGYCKSK 719
Query: 145 HLVNA 149
+ A
Sbjct: 720 NPTAA 724
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ A E+A+ LF+ ++ L+ N + Y M+ Y ++EE+
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V PD F YN+ ++ C ++ EM G V + L+ Y +
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML--EKGFASTVSFNTLIEGYCKSGK 789
Query: 146 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L E++ L+E + ++Q+I TY LI G + ++W ++ T+
Sbjct: 790 L--QEANHLLE---EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 844
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQ 226
+ Y +L Y +G++ EV + ++
Sbjct: 845 KTYTSLLHGYHNIGNMSEVSALFEE 869
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A T TY+ +++ + + + + L NA++Y +MT + G+VE+ +
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481
Query: 81 VVEEIKRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEM 120
++E ++ + ++PD+F YN L I C A +++ + +L EM
Sbjct: 482 ILERMREQGILPDVFCYNSLIIGFCKAK-RMEEARTYLMEM 521
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ + E+A + + + + N +++N ++ G++EK +++E+
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD TY+L I N+ + + LDEM
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM------------------------- 416
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+K +TY +I GN + I + + M K + Y
Sbjct: 417 ------------KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 464
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+++++ G ++E I+++ ++ D+ N L+ F E+A + M +L+
Sbjct: 465 TLMTAHAKEGRVEESRMILERMREQGILP-DVFCYNSLIIGFCKAKRMEEARTYLMEMLE 523
Query: 266 KNCAP 270
+ P
Sbjct: 524 RRLRP 528
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YTAL+ + +A +F + + + Y+ ++ G++ + + E++
Sbjct: 568 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 627
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K ++P+ FTYN IS N+D+ + L+EM C G + D V Y L++ A +
Sbjct: 628 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEI 686
Query: 147 VNAES 151
A++
Sbjct: 687 ERAKN 691
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+L+ A +A+ L+ +++ N+ A Y ++ Y ++G + +V+ + EE+
Sbjct: 811 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 870
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K + PD TY + I + N+ + K DE+
Sbjct: 871 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 905
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 99/255 (38%), Gaps = 11/255 (4%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 79
+ S + L+ Y + +A +F K + L N ++ + +VE
Sbjct: 141 GSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 200
Query: 80 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
V + + V+PD++TY IS+ N+ K+ L EM + G S + V Y ++
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMG-EKGCSPNLVTYNVIIGG 259
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMT 195
A L A +E ++S+ + + TYD LI + + + +
Sbjct: 260 LCRARLLDEA-----IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 314
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
K Y ++ ++ G +++ I D+ + ++ N LL G EK
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI-EANLIIWNTLLNGVCKAGKMEK 373
Query: 256 ANEFHMLLLQKNCAP 270
A E +++K P
Sbjct: 374 ALEIMQEMMEKGVEP 388
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 20/246 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ YA A E A + + ++ S + N+ +++ ++ Y G+ +K V+ E+
Sbjct: 363 TYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 422
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V PD YN+ I + +D D M + G D V + L++ + + H
Sbjct: 423 RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRME-GVQPDAVTWNTLIDCHCKSGH 481
Query: 146 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
AE L EA ++S TY+ +I G +++ W+ ++ KM S+
Sbjct: 482 HNKAEE--LFEAMQESGCSPCTTTYNIMI---NSFGEQER----WEDVKTLLGKMQSQGL 532
Query: 205 ICILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA- 256
+ + +Y L G K+ E ++ K S + N L+ A++ GL+E+A
Sbjct: 533 LANVVTYTTLVDIYGQSGRFKDAIECLEVMK-SVGLKPSSTMYNALINAYAQRGLSEQAI 591
Query: 257 NEFHML 262
N F ++
Sbjct: 592 NAFRVM 597
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G LS KT+ T A++ A TE+AE +FE +K+ L YN ++ Y+ G
Sbjct: 283 QGNGLSPKTA-TLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGS 341
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
++ +V E++R PD TY+L I + A + + L EM + +V
Sbjct: 342 LKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYV 398
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 87/237 (36%), Gaps = 3/237 (1%)
Query: 34 YAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPD 93
+A + +A V+ + LS ++T + G+ E+ + EE+K ++P
Sbjct: 266 FAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPR 325
Query: 94 IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESST 153
YN + T ++ + + EM SG S D Y L++ Y A +A
Sbjct: 326 TRAYNALLKGYVKTGSLKDAESIVSEME-RSGFSPDEHTYSLLIDAYANAGRWESAR-IV 383
Query: 154 LVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLM 213
L E E S + + ++ Y G K Q+ + +R + Y ++ ++
Sbjct: 384 LKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGK 443
Query: 214 LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
L D+ + D N L+ G KA E + + C+P
Sbjct: 444 CNCLDHALATFDRMRMEGVQP-DAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSP 499
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNL-SFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y+ L+H ++E+L+E S + L YN ++ +EK ++ +
Sbjct: 157 YSILIHALG------RSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRM 210
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQ--VKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+R D Y+ I S T D ++K E+ D D + +N + +
Sbjct: 211 RRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDG--QLLNDIIVGFAK 268
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
S VN S L + + + T +I G ++ + I++ L+ +R
Sbjct: 269 SGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRA 328
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +L Y+ G LK+ I+ + ++S S D + L+ A+++ G E A
Sbjct: 329 YNALLKGYVKTGSLKDAESIVSEMERSGFSP-DEHTYSLLIDAYANAGRWESA 380
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+S Y AL++ YA +E+A F ++ L + L+ N ++ + + + V
Sbjct: 569 PSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSV 628
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
++ +K ++ PD+ TY + + D+V +EM+ SG + D
Sbjct: 629 LQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTL-SGCTPD 675
>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
Length = 999
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 52/264 (19%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERVKQSNLSF 57
+TK +HS ++ + +S+ TS+ T+ ++ ++ +KA E+F ++ L
Sbjct: 722 LTKHGKLHSAISIYDRM-ISSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAAAQELGLPI 780
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
+ MY M++LY G+ ++ +L+ + +K + P ++N I++ A + + K
Sbjct: 781 DEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTF 840
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
EM D G + D Y+ L+ Y E+ +EAE++I
Sbjct: 841 HEMQ-DCGHAPDSFSYLALIRAY--------TEAKLYMEAEEAI---------------- 875
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE--VGE---IIDQWKQSAT 232
RM T+ + C S+L+ LKE +GE I +Q K+++
Sbjct: 876 ---------------RMMLNSSTTPS--CPHFSHLIFAFLKEGQIGEAQRIYNQMKEASV 918
Query: 233 SDFDISACNRLLGAFSDVGLTEKA 256
+ D++ C ++ + + GL ++
Sbjct: 919 AP-DLACCRTMMRVYMEHGLMDEG 941
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 18/239 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + EKA ++F ++Q Y+ +++ G+ E+ + EE+
Sbjct: 281 TYTVVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEEM 340
Query: 86 KRKNVVPDIFTYNLWISSCAATL-----NIDQVK--KFLDEMSCDSGGSDDWVKYVNLVN 138
K + +VP +T CA+ L N D K L EM +S D V Y L+
Sbjct: 341 KAQGIVPSNYT-------CASLLALYYKNEDYSKALSLLSEME-NSKVIPDEVIYGILIR 392
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
IY AE T + EK+ TY + ++ G+ D+ ++ +S+ M K
Sbjct: 393 IYGKLGLYEEAE-QTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMMMRNVK 451
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
+ +Y IL Y+ + + Q D+ CN LL + +G EKA
Sbjct: 452 PSHFSYSAILRCYVAKEDIVAAEDTFRALSQHGLP--DVFCCNDLLRLYMRLGHLEKAR 508
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ +Y E+AE+ FE+++++ L + Y M ++++ G ++ V+E +
Sbjct: 387 YGILIRIYGKLGLYEEAEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMM 446
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+NV P F+Y+ + A +I + +S G D +L+ +Y+ HL
Sbjct: 447 MRNVKPSHFSYSAILRCYVAKEDIVAAEDTFRALS--QHGLPDVFCCNDLLRLYMRLGHL 504
Query: 147 VNAESSTL 154
A + L
Sbjct: 505 EKARALVL 512
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 4/181 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT LL LY + AEE F + Q +A+ ++ +Y G+ + + L +
Sbjct: 176 AYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVACGTLLCMYARWGRHKDMMLFYSAV 235
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R+++VP + YN ISS +V +M ++G + Y +++ ++
Sbjct: 236 RRRDLVPPVSVYNYMISSLQKQKLHGKVIHVWKQMR-EAGALPNQFTYTVVISSFVKED- 293
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L+ E + + TY LI + G ++ ++++ M Q + NY
Sbjct: 294 LLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHGKGEQALRLFEE--MKAQGIVPSNYT 351
Query: 206 C 206
C
Sbjct: 352 C 352
>gi|359490053|ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F G +S E Y +L Y E + R+K+S+ + + YN M+ +Y G
Sbjct: 757 FNGFSVSL---EVYNCMLDSYGKEGQIESFRSVLRRMKESSCASDHYTYNIMINIYGEQG 813
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+E+VA V+ E+K + PD+ +YN I + ++ + EM ++G D + Y
Sbjct: 814 WIEEVANVLTELKESGLGPDLCSYNTLIKAYGIAGMVEDAVVLVKEMR-ENGIQPDRITY 872
Query: 134 VNLVN 138
+NL+N
Sbjct: 873 INLIN 877
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 115/263 (43%), Gaps = 11/263 (4%)
Query: 15 EGLPLSAKTSE------TYTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMT 67
E L L K+SE ++ ++ +Y + + A + E + +Q N+ + ++ +M+
Sbjct: 574 ENLYLKLKSSEISLDMIAFSIVVRMYVKSGSLKDACSVLETMDEQKNIVPDIYLFCDMLR 633
Query: 68 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 127
+Y G ++K+ + I + V D YN I+ CA L +D++ + DEM G +
Sbjct: 634 IYQQCGMLDKLQDLYYRILKTGVTWDSEMYNCVINCCARALPVDELSRLFDEMLL-HGFA 692
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
+ + ++++Y + A + ++ + I+Y+ +I Y + K+
Sbjct: 693 PNTITLNVMLDVYGKSRLFKKARKVLWLARKRGLVDV--ISYNTIIAAYGQSKDLKKMLS 750
Query: 188 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 247
+ ++ ++ Y C+L SY G ++ ++ + K+S+ + D N ++ +
Sbjct: 751 TVRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRRMKESSCAS-DHYTYNIMINIY 809
Query: 248 SDVGLTEKANEFHMLLLQKNCAP 270
+ G E+ L + P
Sbjct: 810 GEQGWIEEVANVLTELKESGLGP 832
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ++ Y +K +K +++ + S + +YN M+ Y GQ+E V+ +
Sbjct: 731 SYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRRM 790
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + D +TYN+ I+ I++V L E+ +SG D Y L+ Y A
Sbjct: 791 KESSCASDHYTYNIMINIYGEQGWIEEVANVLTELK-ESGLGPDLCSYNTLIKAYGIAG- 848
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
+V + E ++ Q ITY LI
Sbjct: 849 MVEDAVVLVKEMRENGIQPDRITYINLI 876
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 16/220 (7%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
LS+ Y+ ++H + + E+AEEL +++ + +Y+ MM Y + K
Sbjct: 363 LSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKC 422
Query: 79 ALVVEEIKRKNVVPDIFTY----NLW--ISSCAATLNIDQVKKFLDEM-SCDSGGSDDWV 131
+V E +K P I +Y NL+ I A L+I + EM SC G +
Sbjct: 423 LVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK------EMESC--GIKHNNK 474
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
Y L+N +I NA + E +S Q Y+ LI + +GN D+ I +
Sbjct: 475 TYSMLINGFIHLHDFANA-FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 533
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + + ++R + I+ Y + G +K + +D ++S
Sbjct: 534 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG 573
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA + KA E F ++K+S L + +Y ++ G+++ V E+
Sbjct: 615 TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 674
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + F YN+ I A ++ + + + +M D G + Y + +N A
Sbjct: 675 SFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKED-GVPPNIHTYTSYINACCKAGD 733
Query: 146 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ AE ++E + + + TY LI +A + D+ + ++ +++ K +Y
Sbjct: 734 MQRAEK--VIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASY 791
Query: 205 ICILSSYL 212
C+++S L
Sbjct: 792 HCLVTSLL 799
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 255 FERIPKPSRRE--FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 312
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+ VEE+K + + I TY++ IS A +N Q L + + S + + Y
Sbjct: 313 DMRGALSCVEEMKSEGLELTIVTYSILISG-FAKINDSQSADNLFKEAKTKLSSLNGIIY 371
Query: 134 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
N+++ + + ++ AE + E E+ Y ++ Y + N++K +++ L+
Sbjct: 372 SNIIHAHCQSGNMERAE-ELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 430
Query: 194 MTKQKMTSRNYICILSSYLMLGHL 217
K + +Y C+L+ Y+ +G +
Sbjct: 431 ECGFKPSIISYGCLLNLYVKIGKV 454
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 9/234 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL+LY KA + + ++ + N Y+ ++ ++ + + EE+
Sbjct: 440 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM 499
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R + PD YNL I + N+D+ L++M + + + ++ Y A
Sbjct: 500 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA-FRPIIEGYAVAGD 558
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTS--R 202
+ +A TL +S +TY+ LI GL K K+ + L +M+ +T
Sbjct: 559 MKSA-LDTLDLMRRSGCVPTVMTYNALI---HGLVRKHKVQRAVSVLDKMSIAGITPNEH 614
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y I+ Y G + + E + K+S D+ LL A G + A
Sbjct: 615 TYTIIMRGYAASGDIGKAFEYFTKIKESGLK-LDVYIYETLLRACCKSGRMQSA 667
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T ALL L A+ +E+ +F R+ + NAL Y ++ G+++K + E+
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
R+ +VPD+FTYN+ I + I + +F + M
Sbjct: 62 AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP 97
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S TY AL+ AE L ++ ++ +++N ++ Y G +++ +++
Sbjct: 344 SSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIY 403
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATL-NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ +++K D+FT N I+SC L D+ K++L M + G V Y NL+++Y
Sbjct: 404 DVMEKKGFQADVFTCNT-IASCFNRLKRYDEAKQWLFRM-MEGGVRLSTVSYTNLIDVYC 461
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
++ A+ VE Q ITY+ +I Y G + ++W +++ S
Sbjct: 462 KEGNVEEAKR-LFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDS 520
Query: 202 RNYICIL 208
Y ++
Sbjct: 521 YTYTSLI 527
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT L+ +Y E+A+ LF + + NA+ YN M+ Y G+V++ + +
Sbjct: 452 SYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANM 511
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
K + PD +TY I N+D+ + EM
Sbjct: 512 KANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 547
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYM-SVGQVE 76
P + Y A++ +Y+ + KA+EL + ++Q + + +N ++ + S G
Sbjct: 219 PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP 278
Query: 77 KVAL-VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
+A+ +++ ++ + PD TYN +S+C+ N+D K ++M D W Y
Sbjct: 279 NLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT-YNA 337
Query: 136 LVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-- 193
++++Y AE +E E +TY+ L+ +A N +K+ ++++ ++
Sbjct: 338 MISVYGRCGLAAEAE-RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 194 -MTKQKMTSRNYICILSSYLMLGHL 217
K +MT Y I+ Y G L
Sbjct: 397 GFGKDEMT---YNTIIHMYGKQGQL 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L +Y + +K ++++R+K++ L + YN ++ +Y + E+ L++++++
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P + TY IS+ ++Q ++ +E+ G D Y ++ I +
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE L + + + T L++ Y+ GN + +++ +L+ T+ ++T+ Y
Sbjct: 1049 SKAE-KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 207 ILSSYL 212
++ +YL
Sbjct: 1108 VIDAYL 1113
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ +Y +AE LF ++ +A+ YN ++ + EKV V +++
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ D TYN I +D + +M SG + D + Y L++ A+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V A ++ + E + TY LI YA G +++ + + + + K + Y
Sbjct: 454 TVEA-AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 206 CILSSYL 212
+L L
Sbjct: 513 VMLDVLL 519
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY +L+ + K E+AE+LFE + L + Y+ MM + G K +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+K + P + T +L + S +++ N + +K L + D+ + Y ++++ Y+ +
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK-DTEVELTTLPYSSVIDAYLRS 1115
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 99/244 (40%), Gaps = 8/244 (3%)
Query: 32 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 91
L +G A EL + V+ S L +A+ YN +++ ++ V E+++
Sbjct: 270 RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQ 329
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES 151
PD++TYN IS + ++ E+ G D V Y +L+ + N E
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELEL-KGFFPDAVTYNSLLYAFARER---NTEK 385
Query: 152 STLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTSRNYICIL 208
V + +K + +TY+ +I +Y G D Q++K ++ ++ + + Y ++
Sbjct: 386 VKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLI 445
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
S E ++ + + + L+ ++ G E+A + +L+
Sbjct: 446 DSLGKANRTVEAAALMSEMLDVGIKP-TLQTYSALICGYAKAGKREEAEDTFSCMLRSGT 504
Query: 269 APTN 272
P N
Sbjct: 505 KPDN 508
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T Y ++ L K AE + ++++N ++N M+ +Y ++ +K V
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY 950
Query: 83 EEIKRKNVVPDIFTYNLWI 101
+ IK + PD TYN I
Sbjct: 951 QRIKETGLEPDETTYNTLI 969
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY+ L+H + +A +F +++ L NA YN +++ G V+K + ++EE
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K + PDI TYN+ I I++ K D++ G + + V Y +V+ Y +
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVTYAAMVDGYCKSK 710
Query: 145 HLVNA 149
+ A
Sbjct: 711 NPTAA 715
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ A E+A+ LF+ ++ L+ N + Y M+ Y ++EE+
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V PD F YN+ ++ C ++ EM G V + L+ Y +
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML--EKGFASTVSFNTLIEGYCKSGK 780
Query: 146 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L E++ L+E + ++Q+I TY LI G + ++W ++ T+
Sbjct: 781 L--QEANHLLE---EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTA 835
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQ 226
+ Y +L Y +G++ EV + ++
Sbjct: 836 KTYTSLLHGYHNIGNMSEVSALFEE 860
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A T TY+ +++ + + + + L NA++Y +MT + G+VE+ +
Sbjct: 413 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 472
Query: 81 VVEEIKRKNVVPDIFTYN-LWISSCAATLNIDQVKKFLDEM 120
++E ++ + ++PD+F YN L I C A +++ + +L EM
Sbjct: 473 ILERMREQGILPDVFCYNSLIIGFCKAK-RMEEARTYLMEM 512
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ + E+A + + + + N +++N ++ G++EK +++E+
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD TY+L I N+ + + LDEM
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM------------------------- 407
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+K +TY +I GN + I + + M K + Y
Sbjct: 408 ------------KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 455
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+++++ G ++E I+++ ++ D+ N L+ F E+A + M +L+
Sbjct: 456 TLMTAHAKEGRVEESRMILERMREQGILP-DVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514
Query: 266 KNCAP 270
+ P
Sbjct: 515 RRLRP 519
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YTAL+ + +A +F + + + Y+ ++ G++ + + E++
Sbjct: 559 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 618
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K ++P+ FTYN IS N+D+ + L+EM C G + D V Y L++ A +
Sbjct: 619 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEI 677
Query: 147 VNAES 151
A++
Sbjct: 678 ERAKN 682
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+L+ A +A+ L+ +++ N+ A Y ++ Y ++G + +V+ + EE+
Sbjct: 802 TYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K + PD TY + I + N+ + K DE+
Sbjct: 862 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 896
>gi|302813417|ref|XP_002988394.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
gi|300143796|gb|EFJ10484.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
Length = 388
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 10/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL--MYNEMMTLYMSVGQVEKVALVVE 83
TY L+ ++ + + A EL E++ S + + YN ++ + V V K ++E
Sbjct: 48 TYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILE 107
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ PD+ TYN IS D + + EM + + + Y ++N +
Sbjct: 108 LMIDSGCKPDVVTYNTLISGLCKVRRADDALQLMREME----PAPNTITYNTVINGLWRS 163
Query: 144 SHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ E+ L++ S+ + TY+ +I +K ++ +R K +
Sbjct: 164 RK--DTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEV 221
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
+ ++ +L L++ G +D W A D+ + +LL A D G +KA E L
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLD-WMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNL 280
Query: 263 LLQKNCAPT 271
++ + APT
Sbjct: 281 MVDRGYAPT 289
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P K+ YT LL+ +KA E+F + + + YN ++ +V
Sbjct: 250 GIPSDVKS---YTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRV 306
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
E ++ E++ + + PD+ +Y I A ID+ + S
Sbjct: 307 EHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFRDTS 352
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 9/260 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P SA Y A + T+KA E+FER+K+ + Y ++ LY +
Sbjct: 163 GFPPSAVV---YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKS 219
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
V E++ + P+I T+ +++ A ++ ++ +++ ++G D Y
Sbjct: 220 YMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ-EAGLEPDVYAYNA 278
Query: 136 LVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L+ Y A A E +L++ R +Y+ ++ Y G + +++ ++
Sbjct: 279 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA--SYNIMVDAYGRAGLHEDAQAVFEVMKR 336
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
T ++++ +LS+Y G + + EI++Q +S D N +L + +G E
Sbjct: 337 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP-DTFVLNSMLNLYGRLGQFE 395
Query: 255 KANEFHMLLLQKNCAPTNAS 274
K E + ++K P + S
Sbjct: 396 KMEEV-LTAMEKGPYPADIS 414
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 37/202 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNL-----SFNALM------------------- 61
T+TAL++ +A EKAEE+FE+++++ L ++NALM
Sbjct: 240 TFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 299
Query: 62 -----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
YN M+ Y G E V E +KR + P + ++ L +S+ + +
Sbjct: 300 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 359
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
+ ++ +++M SG D +++N+Y E L EK TY+
Sbjct: 360 AKCEEIVNQMH-KSGIKPDTFVLNSMLNLYGRLGQFEKME-EVLTAMEKGPYPADISTYN 417
Query: 171 FLIILYAGLGNKDKIDQIWKSL 192
LI +Y G +++++++SL
Sbjct: 418 ILINIYGRAGFFARMEELFRSL 439
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 38/248 (15%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ Y +KAE + + ++ Y ++ Y + G +EK V E++
Sbjct: 101 YNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEMR 160
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P YN +I + + + + M D
Sbjct: 161 KYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDR---------------------- 198
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
Q TY LI LY +++ +R K K +
Sbjct: 199 ---------------CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTA 243
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+++++ G ++ EI +Q Q A + D+ A N L+ A+S G A E L+
Sbjct: 244 LVNAFAREGLCEKAEEIFEQL-QEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 302
Query: 267 NCAPTNAS 274
C P AS
Sbjct: 303 GCEPDRAS 310
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T +++ LL Y+ A K EE+ ++ +S + + + N M+ LY +GQ EK+ V
Sbjct: 341 PTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEV 400
Query: 82 VEEIKRKNVVPDIFTYNLWIS 102
+ +++ DI TYN+ I+
Sbjct: 401 LTAMEKGPYPADISTYNILIN 421
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+HL + + +A +++ R+ + + Y+ +M +E V +++E+
Sbjct: 194 SYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEM 253
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+I+T+ + I ID+ L M D+G D V Y L++ A
Sbjct: 254 ESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD-DAGCGPDVVTYTVLIDALCNAGK 312
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L NA+ ++ + S + +TY L+ ++ G+ D I + W + +
Sbjct: 313 LNNAK-ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFT 371
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATS 233
++ + +G + E +D K+ +
Sbjct: 372 ILIDALCKVGKVDEAFGTLDVMKKQGVA 399
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L++ + E A ELF R+ + + + Y+ M+ VG+V+ EE+K
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ PD+ YNL I+ + +++ DEM + G + D Y L+ + + + +
Sbjct: 991 LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMR-NRGITPDLYTYNALI-LNLGIAGM 1048
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
V E + + TY+ LI ++ GN D+ ++K +
Sbjct: 1049 VEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 45/293 (15%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EG+ S KT Y+AL+ + E L + ++ L N + + + G+
Sbjct: 221 EGIKPSLKT---YSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGK 277
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISS-C-AATLN----------------------- 109
+++ +++ + PD+ TY + I + C A LN
Sbjct: 278 IDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYIT 337
Query: 110 ----------IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
+D +K+F EM D G D V + L++ V+ TL +K
Sbjct: 338 LLDKFSDHGDLDAIKEFWSEMEAD-GYLPDVVTFTILIDALCKVGK-VDEAFGTLDVMKK 395
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
TY+ LI L D+ +++ S+ + T+ YI + Y G E
Sbjct: 396 QGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYY---GKSGE 452
Query: 220 VGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
G+ I +++ T+ +I ACN L + ++ G E+A EF L + AP
Sbjct: 453 SGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAP 505
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 5/165 (3%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ TY + Y + + KA + FE++K + + N + N + G++E+
Sbjct: 436 TAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFF 495
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+K+ + PD TYN+ + +D K L EM + G D V +N + +
Sbjct: 496 NGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEM--EENGCDPEVVIINSLIDTLY 553
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
+ V+ ++ +TY+ L+ AGLG + ++ +
Sbjct: 554 KADRVDEAWKMFQRMKEMKLAPTVVTYNTLL---AGLGKEGRVQE 595
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 80/196 (40%), Gaps = 2/196 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TY L+ E+A++ FE + N +YN +M + G VE
Sbjct: 890 SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACE 949
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + ++ + PD+ +Y++ + +D + +E+ SG D V Y ++N
Sbjct: 950 LFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL-SGLDPDLVCYNLMIN-G 1007
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ S V S E TY+ LI+ G ++ ++++ L++ +
Sbjct: 1008 LGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPN 1067
Query: 201 SRNYICILSSYLMLGH 216
Y ++ + M G+
Sbjct: 1068 VFTYNALIRGHSMSGN 1083
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQ-SNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T+ T+ A++H+Y A T +AE L ++KQ + + YN ++ +Y+ ++E V+
Sbjct: 263 TTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGC 322
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+E ++ V PD T+ IS+ AA + + + + EM SG D Y ++ +Y+
Sbjct: 323 LERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEME-GSGFFIDQAMYTVMIAMYV 381
Query: 142 TASHLVNAES 151
A + AES
Sbjct: 382 RARDVSKAES 391
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 49/218 (22%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY L++ A E+AEELF + S N+++Y ++ + G++++ +
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+E+ PD+ T+ + I + N +Q K +EM GG V
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM--RGGCKPNV---------- 400
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT- 200
+TY +I GL KI ++ + R+ K +
Sbjct: 401 -------------------------VTYTTII---QGL---SKIGRVANAFRIMKGMIAH 429
Query: 201 -----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
S YIC+L + LG L E +++D+ + ++S
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467
>gi|242082131|ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
gi|241942184|gb|EES15329.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
Length = 426
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
GLPLS T++A++ Y ++ ++A E+F R+ + +YN ++ + G
Sbjct: 141 GLPLS---PTTFSAVISSYGHSRLPDQAVEVFNRLPRFGCPQTTEVYNALLDALCANGNF 197
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
++ + RK V PD T++ + S A +++ + FLD+M+ S G V+ +
Sbjct: 198 TGAYKLLRRMARKGVAPDRATFSTLVDSWCAAGKLNEAQAFLDDMA--SRGFRPPVRGRD 255
Query: 136 -LVNIYITASHLVNAESSTLVEAEKSI 161
LV+ + A HL A++ L ++ I
Sbjct: 256 LLVDGLVRAGHLEEAKAFALRMTKEGI 282
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 110/273 (40%), Gaps = 42/273 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+H Y ++ KA E++E + + N + Y ++ G++EK + + + +
Sbjct: 294 TYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353
Query: 86 KRKNV-----------------VPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
K++NV P++FTY + + + + L MS + G
Sbjct: 354 KKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE-GCEP 412
Query: 129 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 188
+ V Y L++ A L EA++ T YD + Y+ L ID++
Sbjct: 413 NHVVYDALIDGCCKAGK--------LDEAQEVFTTMLECGYDPNVYTYSSL-----IDRL 459
Query: 189 WKSLRM-----TKQKMTSRNYICILSSYL-MLGHLKEVGEIIDQWK-----QSATSDFDI 237
+K R+ KM + + Y M+ L +VG+ + +K + + ++
Sbjct: 460 FKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNV 519
Query: 238 SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++ F G EK E + K CAP
Sbjct: 520 VTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAP 552
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
EKA + + + Y++++ + +VEK + +E+KR + PD++ Y
Sbjct: 204 EKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTL 263
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
I S I+Q + + DEM D G + + V Y L++ Y+ + + A + K
Sbjct: 264 IDSFCKAGFIEQARNWFDEMERD-GCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
T +TY LI G +K QI+K ++
Sbjct: 323 CTP-NIVTYTALIDGLCKAGKIEKASQIYKIMK 354
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ T++A +L +++ + N + Y M+ + G+VEK +++++
Sbjct: 487 YTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMS 546
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K P+ TY + I+ C +T +D+ K L+EM
Sbjct: 547 SKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY+ ++ A EKA +LF+ +K++ ++ + +Y ++ + G +E+ +
Sbjct: 222 TSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFD 281
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++R P++ TY I + + + + + EM G + + V Y L++ A
Sbjct: 282 EMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY-EMMLSKGCTPNIVTYTALIDGLCKA 340
Query: 144 SHLVNA 149
+ A
Sbjct: 341 GKIEKA 346
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 109/261 (41%), Gaps = 18/261 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ + A + E+A F+ +++ + N + Y ++ Y+ +V K V E +
Sbjct: 259 VYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMM 318
Query: 86 KRKNVVPDIFTYNLWISSCAATLNID---QVKKFLDEMSCDSGGSDDWVKYV----NLVN 138
K P+I TY I I+ Q+ K + + + + D + V N N
Sbjct: 319 LSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPN 378
Query: 139 IYITASHLVNA--ESSTLVEAE---KSIT----QRQWITYDFLIILYAGLGNKDKIDQIW 189
++ T LV+ ++ + EA KS++ + + YD LI G D+ +++
Sbjct: 379 VF-TYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
++ Y ++ L +++ + +++ + ++ ++
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAP-NVVIYTEMIDGLCK 496
Query: 250 VGLTEKANEFHMLLLQKNCAP 270
VG T++A + +++ +K C P
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNP 517
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T T+ +++ + +A +LF+ +K+ S NA+MYN +M Y+ + ++++ ++
Sbjct: 334 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 393
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
EE+++K + PD T+N+ +S + + L ++S D +L +I +
Sbjct: 394 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDR-----SLFDISV 448
Query: 142 T----ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ A L A + EK ++ I ++ +I Y+ G +DK + +K M
Sbjct: 449 SGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYK--LMVHF 505
Query: 198 KMTSRNYICILSSYLML----GHLKEVGEIIDQWKQSATS 233
+T C SS LM G L+E E+I Q + S
Sbjct: 506 GLTPSPSTC--SSLLMGLSINGRLQEATELIGQMIEKGLS 543
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++A + + E+A +F + + L N YN ++ + G++ + AL +E++
Sbjct: 583 AFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE-ALKLEKV 641
Query: 86 KR-KNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
R + ++PDIFT N+ I C + F+D +G S D + Y L+N Y A
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQ--TGLSPDIITYNTLINGYCKA 699
Query: 144 SHLVNAES 151
+VNA++
Sbjct: 700 FDMVNADN 707
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 100/249 (40%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++ ++ + E L + + + NA YN ++ G+ +
Sbjct: 268 TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM 327
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P + T+N I++ N+ + +K D + + G S + + Y L+N Y+
Sbjct: 328 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK-EMGFSPNAIMYNTLMNGYVKMRE 386
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ + E K IT++ L+ + G ++ D++ K + + +
Sbjct: 387 -IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFD 445
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+S G L E E + + S I A N ++ A+S GL +KA E + L++
Sbjct: 446 ISVSGLCWAGRLDEAMEFLMDMLEKGLSP-SIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 504
Query: 266 KNCAPTNAS 274
P+ ++
Sbjct: 505 FGLTPSPST 513
>gi|356510655|ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 712
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+T TA++ +Y A+W+ A EL++R+K++ + ++YN ++ + VG VE+ + +
Sbjct: 365 KTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRD 424
Query: 85 IKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
+K+ + PD ++Y ++ + ++D+ K DEM C G
Sbjct: 425 MKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKLFDEM-CKLG 465
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 19/248 (7%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+PL + TY+ ++ +KA FER+ ++ L + + Y+ ++ +Y +G+V
Sbjct: 219 GVPLD---NITYSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLGKV 275
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
E+V + E + PD T+++ + D ++ EM G + V Y
Sbjct: 276 EEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEME-SVGVQPNLVVYNT 334
Query: 136 LVNIYITASHLVNAES-------STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 188
L+ A A S +V EK++T +I +Y ++
Sbjct: 335 LLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTA--------VIKIYGKARWSRDALEL 386
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS 248
W+ ++ M Y +L+ +G ++E + KQS D + +L +
Sbjct: 387 WQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYG 446
Query: 249 DVGLTEKA 256
G +KA
Sbjct: 447 SQGDVDKA 454
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ Y ++L + +A +L R + ++ + +MYN + T + QV + + E+
Sbjct: 396 DAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEK 455
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K+ PDIFTYN+ ISS +D K +E+ +S D + Y +L+N + +
Sbjct: 456 MKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELE-NSNCQPDVISYNSLINC-LGKN 513
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 186
V+ E ++ +TY LI + G DK++
Sbjct: 514 GDVDEAHMRFKEMQEKGLNPDVVTYSTLIECF---GKTDKVE 552
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ Y A + A ++FE ++ SN + + YN ++ G V++ + +E+
Sbjct: 467 TYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEM 526
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+ K + PD+ TY+ I T ++ DEM + G S + V Y
Sbjct: 527 QEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAE-GCSPNLVTY 573
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 86/212 (40%), Gaps = 6/212 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL Y + +KA ++ + + S + +N ++ +V+K V E++
Sbjct: 190 SYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDM 249
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR++ PD FTY + I D+ M + G + + + Y ++ +
Sbjct: 250 KRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAM-LEKGFTLNLIAYNTMIEA-LAKGR 307
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ + + ++ Q TY L+ + G +K+D I + M+K+ M + Y
Sbjct: 308 MADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNI---VEMSKKYMNKQIYA 364
Query: 206 CILSSYLMLGHLKEVGEII-DQWKQSATSDFD 236
+ + LGH E + + W D D
Sbjct: 365 YFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKD 396
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 24/254 (9%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + A T+++ LF+ + + + N + YN M+ +K L+ ++
Sbjct: 260 TYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKM 319
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P+ FTY++ ++ A ++++ + EMS KY+N IY ++
Sbjct: 320 VENGCQPNEFTYSVLLNVLVAEGQLNKLDNIV-EMS---------KKYMN-KQIY---AY 365
Query: 146 LVNAESSTLVEAE-KSITQRQWITY-----DFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
V S +E + W + D + + L + KI + L +K
Sbjct: 366 FVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKC 425
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQW---KQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ + I + + LG LK+V I D + KQ DI N L+ ++ G + A
Sbjct: 426 ITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPP-DIFTYNILISSYGRAGRVDSA 484
Query: 257 NEFHMLLLQKNCAP 270
+ L NC P
Sbjct: 485 VKIFEELENSNCQP 498
>gi|297802950|ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315195|gb|EFH45618.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 906
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F+G +S E Y LL Y K EK + +R+K+S + YN M+ +Y G
Sbjct: 763 FDGFSVSL---EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 819
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+++VA V++E+K + PD+ +YN I + +++ + EM + D V Y
Sbjct: 820 WIDEVAGVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR-GKNITPDKVTY 878
Query: 134 VNLV 137
NLV
Sbjct: 879 TNLV 882
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 99/244 (40%), Gaps = 4/244 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ +L +Y +K + L+ R+++S + ++ MYN ++ +++++ EE+
Sbjct: 634 FRDMLRIYQKCDLQDKLQHLYYRIQKSGIHWDQEMYNCVINCCARALPLDELSRTFEEMI 693
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R P+ T+N+ + +V + + G D + Y ++ Y
Sbjct: 694 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDF 751
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
N SS + + Y+ L+ Y +K I K ++ + Y
Sbjct: 752 TNM-SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 810
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+++ Y G + EV ++ + K+S D+ + N L+ A+ G+ E+A + K
Sbjct: 811 MINIYGEQGWIDEVAGVLKELKESGLGP-DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGK 869
Query: 267 NCAP 270
N P
Sbjct: 870 NITP 873
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN----LSFNALM-------------------- 61
T+ LL +Y AK +K ELF K+ +S+N ++
Sbjct: 703 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDFTNMSSAIKNMQ 762
Query: 62 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 111
YN ++ Y Q+EK +++ +K+ PD +TYN+ I+ ID
Sbjct: 763 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 822
Query: 112 QVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+V L E+ +SG D Y L+ Y
Sbjct: 823 EVAGVLKELK-ESGLGPDLCSYNTLIKAY 850
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y++++ +Y + EKAEE+ +KQ + + M+ Y G++E+ V+ +
Sbjct: 283 AYSSMITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLISM 342
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ P+I YN I+ ++ K +S D G D Y +++
Sbjct: 343 EAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLS-DIGLEPDETSYRSMI 393
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 4/211 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E Y +++ A A ++ FE + + + N + +N ++ +Y +KV +
Sbjct: 667 EMYNCVINCCARALPLDELSRTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLL 726
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
KR VV D+ +YN I++ + + + M D G S Y L++ Y
Sbjct: 727 AKRHGVV-DVISYNTIIAAYGKNKDFTNMSSAIKNMQFD-GFSVSLEAYNTLLDAYGKDK 784
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ S L +KS + TY+ +I +Y G D++ + K L+ + +Y
Sbjct: 785 QMEKFR-SILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAGVLKELKESGLGPDLCSY 843
Query: 205 ICILSSYLMLGHLKE-VGEIIDQWKQSATSD 234
++ +Y + G ++E VG + + ++ T D
Sbjct: 844 NTLIKAYGIGGMVEEAVGLVKEMRGKNITPD 874
>gi|255551975|ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543667|gb|EEF45195.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 875
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 3/202 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S TY ++ Y A ++A ++F + + + + +N M+ + + GQ+E+VAL++
Sbjct: 329 SSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEEVALLM 388
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
++++ PD TYN+ I A +I+ + M D D V Y L+ + +
Sbjct: 389 QKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQ-LQPDLVSYRTLLYAF-S 446
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
H+VN + + E ++ + T L +Y G +K +W M+S
Sbjct: 447 IRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGMLEK-SWLWFWRFHLAGNMSSE 505
Query: 203 NYICILSSYLMLGHLKEVGEII 224
Y + +Y GH+KE +
Sbjct: 506 CYSANIDAYGERGHVKEAARVF 527
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 115/231 (49%), Gaps = 4/231 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y++L+ + A A +KA+ ++++++ L + + Y +++ ++ +G++E V +E+
Sbjct: 575 SYSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEM 634
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+V PDI Y + I++ A + + + ++D M +G + V Y +L+ +Y +
Sbjct: 635 VGFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMK-GAGLPGNTVIYNSLIKLYTKVGY 693
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A+ + + + + + + +I LY+ ++I++S++ K Y
Sbjct: 694 LREAQETYKLLQSSDVGPETY-SSNCMIDLYSEQSMVKPAEEIFESMK-RKGDANEFTYA 751
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+L Y LG ++ +I Q ++ + +S N +LG ++ G ++A
Sbjct: 752 MMLCMYKRLGWFEQAIQIAKQMRELGLLTYLLSY-NNVLGLYALDGRFKEA 801
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 38 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 97
K T KA E +Q ++S ++ YN M+ Y GQ+++ + + E+ RK ++P T+
Sbjct: 309 KVTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTF 368
Query: 98 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL-VNAESSTLVE 156
N I C +++V + +M D + N++ I+I A H +N +S
Sbjct: 369 NTMIHICGNQGQLEEVALLMQKMEELRCPPD--TRTYNIL-IFIHAKHNDINMAASYFKR 425
Query: 157 AEKSITQRQWITYDFLIILYA 177
+K Q ++Y L+ ++
Sbjct: 426 MKKDQLQPDLVSYRTLLYAFS 446
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 10/253 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ALLH YA A + LF + + + ++N ++ Y +G ++K L+ E++
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 354
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ V PDI T++ IS+ +D + + M D+G D Y L+
Sbjct: 355 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM-IDTGVPPDTAVYSCLIQGQCNRRD 413
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKMTS 201
LV A+ K I + +I G KD +D I T Q+
Sbjct: 414 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH----TGQRPNL 469
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
+ ++ Y ++G++KE ++D +S + DI N L+ + G + A
Sbjct: 470 ITFNSLVDGYCLVGNMKEAVGLLDSM-ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 528
Query: 262 LLLQKNCAPTNAS 274
+L K T+ S
Sbjct: 529 DMLHKRVTLTSVS 541
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L++ K +KAE + ++ + + N + YN ++ Y + G ++ V +E+
Sbjct: 190 TYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM 249
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+VPD+ N ++++ I + + D M G D + Y L++ Y TA
Sbjct: 250 SSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL-KGPKPDVISYGALLHGYATAGC 308
Query: 146 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 202
+ ++ ++ E + R ++ LI YA LG DK +++ MTKQ +
Sbjct: 309 IAGMDNLFNVMVCEGVVPDRH--VFNTLINAYARLGMMDKSLLMFED--MTKQGVNPDII 364
Query: 203 NYICILSSYLMLGHLKEVGE----IIDQWKQSATSDFDI---SACNR 242
+ ++S++ LG L + E +ID T+ + CNR
Sbjct: 365 TFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 411
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P +A T TY L++ Y A+ + +F R+ ++ L + YN ++ + G+V+K
Sbjct: 112 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 171
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ +++ + ++P++ TY+ I+ T +D+ ++ L +M +G + + Y L+
Sbjct: 172 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM-VGAGVRPNNMTYNCLI 230
Query: 138 NIYITAS 144
+ Y T+
Sbjct: 231 HGYSTSG 237
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ + K EKA ELF+ + + N Y +++ Y G+ + +++ +K
Sbjct: 144 YIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESYTALVSAYSRSGRFHEAFNLLDRMK 203
Query: 87 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
PD+ TY++ I SC + ++VK L +M+ +G + V Y L++ Y A
Sbjct: 204 DTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLTDMA-RAGIRPNTVTYNTLIDAYGKARR 262
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
ES+ L ++ W T + + + G + ++ ++ + + + Y
Sbjct: 263 FPEMESTLLKMLSQNCKPDIW-TMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYN 321
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL-- 263
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 322 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 380
Query: 264 --LQKNC 268
++ NC
Sbjct: 381 ERIKPNC 387
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/253 (18%), Positives = 111/253 (43%), Gaps = 3/253 (1%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P +TY+ L+ A EK + L + ++ + N + YN ++ Y + +
Sbjct: 206 PGCQPDVKTYSILIKSCLHAYDFEKVKSLLTDMARAGIRPNTVTYNTLIDAYGKARRFPE 265
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ + ++ +N PDI+T N + + ++ I+ ++ ++ SG + Y L+
Sbjct: 266 MESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQIETMESCYEKFQA-SGIVPNIKTYNILL 324
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ Y A + + + +K +TY+ +I + G+ ++++ I++ ++ +
Sbjct: 325 DSYGKAK-MYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERI 383
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
K ++ +Y G +K++ ++ + S + DI N L+ A+ VG +
Sbjct: 384 KPNCVTLCSVVRAYGRAGEVKKIKTVLRIVENSDIT-LDIVFFNCLVDAYGRVGCLAEMW 442
Query: 258 EFHMLLLQKNCAP 270
+ L+ + C P
Sbjct: 443 DILDLMKEHRCKP 455
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ + K EKA +LF+ + + N Y +++ Y G+ + +++ +K
Sbjct: 144 YIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSYTALVSTYSRSGRFREAFDLLDRMK 203
Query: 87 -RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
PD+ TY++ I SC + ++VK L +M+ +G + V Y L++ Y A
Sbjct: 204 DTPGCQPDVQTYSILIKSCLHAYDFEKVKSLLADMA-RAGIPPNTVTYNTLIDAYGKAGR 262
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
ES+ L ++ W T + + + G + ++ ++ + + + Y
Sbjct: 263 FAEMESTLLKMLSQNCKPDVW-TMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYN 321
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L SY +++G ++ ++ Q + I N ++ AF G E+ L+
Sbjct: 322 ILLDSYGKAKMYEKMGAVM-EYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKS 380
Query: 266 KNCAP 270
+ P
Sbjct: 381 ERIKP 385
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 109/255 (42%), Gaps = 7/255 (2%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P +TY+ L+ A EK + L + ++ + N + YN ++ Y G+ +
Sbjct: 206 PGCQPDVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAE 265
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ + ++ +N PD++T N + + ++ I+ ++ ++ SG + Y L+
Sbjct: 266 MESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCYEKFQA-SGIVPNIKTYNILL 324
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ Y A + + + +K +TY+ +I + G+ ++++ I+ R+ K
Sbjct: 325 DSYGKAK-MYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIF---RLMKS 380
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD--FDISACNRLLGAFSDVGLTEK 255
+ N + + S G EV +I + SD DI N L+ A+ VG +
Sbjct: 381 ERIKPNCVTLCSVVRAYGRAGEVKKIKTALRIIENSDITLDIVFFNCLVDAYGRVGCLAE 440
Query: 256 ANEFHMLLLQKNCAP 270
+ L+ + C P
Sbjct: 441 MWDILDLMKEHRCKP 455
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
T LL+ A + T+ ++++++ + + N +YN ++ G VEK ++ E++
Sbjct: 169 TVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMES 228
Query: 88 KNVVPDIFTYNLWIS-SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K V PD+FTYN IS C ++ + + D M G D V Y +L++ + +
Sbjct: 229 KCVFPDLFTYNTLISLYCKKGMHYEAL-SVQDRME-REGIKPDIVTYNSLIHGFCKEGRM 286
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
E+ L + + T +TY LI Y L + D+ ++ + + T Y
Sbjct: 287 --REAMRLFKEIRDATPNH-VTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNS 343
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
IL +G +++ +++++ + +++ CN L+ A+ +G
Sbjct: 344 ILRKLCEIGRIRDANKLLNEMSEKKIEPDNVT-CNTLINAYCKIG 387
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 103/249 (41%), Gaps = 9/249 (3%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
Y L+H + EKA+ L ++ + + YN +++LY G + V +
Sbjct: 201 HVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDR 260
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++R+ + PDI TYN I + + + E+ + + V Y L++ Y +
Sbjct: 261 MEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI---RDATPNHVTYTTLIDGYCRLN 317
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A E E +TY+ ++ +G +++ M+++K+ N
Sbjct: 318 DLDQA-LRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNE--MSEKKIEPDNV 374
Query: 205 IC--ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
C ++++Y +G +K ++ ++ ++ D L+ F + + A E +
Sbjct: 375 TCNTLINAYCKIGDMKSALKVKNRMVEAGLK-LDQFTYKALIHGFCKIREMDGAKELLLS 433
Query: 263 LLQKNCAPT 271
+L +P+
Sbjct: 434 MLDAGFSPS 442
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+TAL+ ++ ++A+EL++ + QS++ N + YN ++ G++ + +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P++ TYN IS +D+ K MSC+ G + D Y L++ Y
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGK 366
Query: 146 L------------------------------VNAE-SSTLVEAEKSITQRQWITYDFLII 174
L VN E S LV+ + ++I I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 175 LYAGLGNKDKIDQIWK---SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ GL DK+++ W+ L + K +R Y ++ G +E E+I + K+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+H Y A A+++F R+ +S + + YN ++ + G++EK ++VE++
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ + DI TYN+ I T + + ++ G D + Y+ +++
Sbjct: 946 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT-RKGVKPDAIAYITMIS 997
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L++ + A+ +F+ + + + YN ++T + +VE + E+
Sbjct: 816 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +V D FTYN I ++ +K + M D G S D V Y L++
Sbjct: 876 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGK 934
Query: 146 LVNAESSTLVE-AEKSITQRQWITYDFLIILYAGLGNKDKIDQIW---KSLRMTKQKMTS 201
+ ++ +VE +KS ITY+ +I GL DK+ + W +SL K +
Sbjct: 935 I--EKALVMVEDLQKSEMDVDIITYNIII---QGLCRTDKLKEAWCLFRSLTRKGVKPDA 989
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
YI ++S G +E ++ + K+
Sbjct: 990 IAYITMISGLCRKGLQREADKLCRRMKEDG 1019
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY L+ L +WT+ A L + VK+ + N + + ++ ++ G + + + +E
Sbjct: 746 TYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKE 804
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ R++VVP++FTYN I+ + K D M G D V Y L+
Sbjct: 805 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV-SKGCFPDVVTYNTLI 856
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A EL +++ L + + YN ++T G+ A ++ ++ ++++ PD+ T+ I
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
N+D+ ++ EM S + V Y +++N L +A+ + + A K
Sbjct: 255 VFVKQGNLDEAQELYKEM-IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 218
+TY+ LI + D+ ++++ + Y ++ Y +G L+
Sbjct: 314 P-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L++ Y+ A+ E+A +F + S L + + YN ++ Y +VE + + +
Sbjct: 282 TYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSM 341
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PDI +Y +++ A T N+ + ++ L M +G + V Y L+ Y T+ H
Sbjct: 342 GQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMK-QAGLEPNVVTYGTLMQGY-TSVH 399
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
+NA T + +K+ + + L+
Sbjct: 400 DINAMLQTFEDLQKAGIKPNSTIFTLLV 427
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 10/215 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKT---SETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 57
+ K + ER F+ L SA+ + Y +LH Y A + + LF ++K + +
Sbjct: 187 LCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPM 246
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
+ +N +M +V E + ++ + PD+ TY I++ + +++
Sbjct: 247 TVVTFNSLMAFQKTVADAEAC---LRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVF 303
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWI-TYDFLIILY 176
EM SG + Y L++ Y + AES L ++ R I +Y L+ Y
Sbjct: 304 REMVA-SGLRPSRIAYNTLLDAYAKCKEVEGAES--LFKSMGQDRCRPDIRSYTTLLAAY 360
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 211
A GN K +++ K ++ + Y ++ Y
Sbjct: 361 ANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGY 395
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT LL YA +KAE L +R+KQ+ L N + Y +M Y SV + + E++
Sbjct: 352 SYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDL 411
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
++ + P+ + L + + + + + +M DSG D
Sbjct: 412 QKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKM-LDSGCPAD 454
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ TY++L+H + A+ L + +++ L N + Y ++ Y +GQ+ KV +V+
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVL 734
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+E+ N+ P+ FTY + I + K L+EM+ + G D V Y N
Sbjct: 735 QEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMT-EKGILPDAVTYNAFTN 789
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 102/232 (43%), Gaps = 3/232 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T AL+H A ++ +L + + L F+ + YN +++ G+V++ + EE+
Sbjct: 503 TSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEM 562
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K + PDI+T+NL + ID+ + E +G + Y +++ Y A+
Sbjct: 563 VKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK-KNGYVPNVYTYGVMIDGYCKANK 621
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ E + L E + + Y+ LI Y GN + ++ ++ ++ Y
Sbjct: 622 VEEGE-NLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYS 680
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
++ +G + + ++D+ ++ ++ ++G +S +G K N
Sbjct: 681 SLMHGLCNIGLVDDAKHLLDEMRKEGLLP-NVVCYTTIIGGYSKLGQMNKVN 731
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ Y+ K + + + N+ N Y M+ + +G+ ++ A ++ E+
Sbjct: 714 YTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMT 773
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG-SDDWVKYVNLVNIYITASH 145
K ++PD TYN + + +++ K DEMS SG D + Y L++ S
Sbjct: 774 EKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMS--SGAVCLDEITYTTLIDGCHQPST 831
Query: 146 LVNAE 150
N E
Sbjct: 832 ATNQE 836
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 2/155 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ Y A E+ E L + L N+++YN ++ Y G + + +++
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + V+ TY+ + +D K LDEM G + V Y ++ Y
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR-KEGLLPNVVCYTTIIGGYSKLGQ 726
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG 180
+ N + L E TY +I + LG
Sbjct: 727 M-NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLG 760
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
++ +++ + + A LF ++++ ++ N + YN ++ G++++ E++
Sbjct: 259 FSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMV 318
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
++ V P + TY+++I+ ID+ L EMS + G + V Y L++ Y ++
Sbjct: 319 KEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMS-ELGFVPNEVVYNTLIDGYCKMGNI 377
Query: 147 VNA 149
A
Sbjct: 378 SEA 380
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 97
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 429 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 488
Query: 98 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 154
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 489 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 540
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I+ Y
Sbjct: 541 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 600
Query: 215 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
G ++ E+ D ++ + N L+ + EKA E
Sbjct: 601 GDMRRSLEVFDMMRRCGCVP-TVHTFNGLINGLVEKRQMEKAVE 643
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 659 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 718
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 719 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 777
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 778 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 836
Query: 206 CILSSYLMLGHLKEV 220
C+L+S L + E
Sbjct: 837 CLLTSLLSRASIAEA 851
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T T+ L++ + EKA E+ + + + +S N Y ++M Y SVG K
Sbjct: 621 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 680
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
++ + + DIFTY + +C + + EMS
Sbjct: 681 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 719
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 484 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 543
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 544 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 578
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 96/224 (42%), Gaps = 15/224 (6%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 97
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 432 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCL 491
Query: 98 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 154
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 492 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 543
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I++ +
Sbjct: 544 EDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKS 603
Query: 215 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
G ++ E+ D ++ + N L+ + EKA E
Sbjct: 604 GDMRRSLEVFDMMRRCGCVP-TVHTFNALINGLVEKRQMEKAVE 646
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 662 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEM 721
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 722 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 780
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 781 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYH 839
Query: 206 CILSSYLMLGHLKEV 220
C+L+S L + E
Sbjct: 840 CLLTSLLSRASIAEA 854
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T T+ AL++ + EKA E+ + + + +S N Y ++M Y SVG K
Sbjct: 624 TVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 683
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
++ + + DIFTY + +C + + EMS
Sbjct: 684 TRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMS 722
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 487 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 546
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ + PD+ YN I++ N+D+ + + EM
Sbjct: 547 VKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEM 581
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 95/246 (38%), Gaps = 6/246 (2%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P A + T+ +H + + ++A E +K + Y ++ Y +
Sbjct: 219 PHIAPDAYTFNIFVHGWCSVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRR 278
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
V +++ + + P++ TY + ++S ++ D M SG D + Y L+
Sbjct: 279 VYEILDSMSSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMK-SSGCKPDTLFYNALI 337
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
N+ A HL A VE +++ R TY+ +I + G D + K +
Sbjct: 338 NLLGRAGHLFEANQVFRVEMPRNVVPRNVATYNTMISILCQYGRDDDALDVLKEMEAQSC 397
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEI---IDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
K + Y +L L+ G + G I + + + D+ L+ VG T+
Sbjct: 398 KPDLQTYQPLLR--LLFGRRGQTGAIHHLLSELRDRNGLGLDLDTYTLLIHGLCRVGETD 455
Query: 255 KANEFH 260
A + +
Sbjct: 456 WAYQLY 461
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T ETYT++L Y +KA E+F+R+K + L + YN +++ Q+E L++
Sbjct: 394 TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 453
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E+ VVP Y A T ++++ M ++ + D V Y L+
Sbjct: 454 NEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKEN-LAIDIVAYGALLKACCN 512
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITY-DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ + A + + + + ITY L YA G ++ +++ ++ K +
Sbjct: 513 SGAMHGA-AEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDT 571
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSAT--SDFDISACNRLLGAFSDVGLTEKANEF 259
Y ++++Y + G +++ ++ + +S++ + DI N L+ ++ G +A E
Sbjct: 572 LIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEEL 631
Query: 260 HMLLLQKNCAP 270
L + P
Sbjct: 632 FQGLARLKLVP 642
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 91/244 (37%), Gaps = 37/244 (15%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+H + A +KA + E ++ + L Y ++ Y+ G ++K V + IK
Sbjct: 363 YNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIK 422
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P + +YN +S A ++ + L+EM L
Sbjct: 423 TAGLRPGVVSYNSLLSGLAKARQMENARLMLNEM-------------------------L 457
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
N +V +E+ Y L YA G+ +K +++ ++ + Y
Sbjct: 458 ANG----VVPSER--------IYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGA 505
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+L + G + E+ Q + I+ C L GA++ G E+A E + +
Sbjct: 506 LLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERD 565
Query: 267 NCAP 270
P
Sbjct: 566 GTKP 569
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 105/268 (39%), Gaps = 30/268 (11%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ +++ YA A E AE FE+ K NL ++YN ++ Y G +E V ++ +++
Sbjct: 204 FCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQME 263
Query: 87 RKNVVPDI---------------------FTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
+ ++ F + L +S A N+ + L+EM G
Sbjct: 264 EEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAG--NMAKALDILEEMD-KHG 320
Query: 126 GSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKD 183
S + + Y +++ Y A +V A + + Y+ L+ + G D
Sbjct: 321 VSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG---LKPDIVIYNILVHAFCKAGRMD 377
Query: 184 KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRL 243
K + +++ + T Y IL Y+ G++++ E+ D+ K + +S N L
Sbjct: 378 KALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVS-YNSL 436
Query: 244 LGAFSDVGLTEKANEFHMLLLQKNCAPT 271
L + E A +L P+
Sbjct: 437 LSGLAKARQMENARLMLNEMLANGVVPS 464
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT+L+H YA A+ E A E + + N ++ +++ Y S G E E+ K
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 228
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+N+VP YN + + N++ V+ L +M
Sbjct: 229 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQM 262
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 45 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 104
++F+R++ SN M+N MM Y+ EK L+ + + + NV PD +TY L + +C
Sbjct: 96 QIFDRIENSN----GFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQAC 151
Query: 105 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 164
A L K+ D + SD +V+ L+N+Y ++ +A L + +
Sbjct: 152 AVRLLEFGGKEIHDHVLKVGFDSDVYVQNT-LINMYAVCGNMRDARK--LFDESPVLDSV 208
Query: 165 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 224
W + + AG K +++ ++ +M RN + S ++LG ++G+++
Sbjct: 209 SWNS------ILAGYVKKGDVEEA----KLIFDQMPQRNIVASNSMIVLLG---KMGQVM 255
Query: 225 DQWKQ-SATSDFDISACNRLLGAFSDVGLTEKA 256
+ WK + + D+ + + L+ + G+ E+A
Sbjct: 256 EAWKLFNEMDEKDMVSWSALISGYEQNGMYEEA 288
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 35/240 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+TAL+ ++ ++A+EL++ + QS++ N + YN ++ G++ + +
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P++ TYN IS +D+ K MSC+ G + D Y L++ Y
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGK 366
Query: 146 L------------------------------VNAE-SSTLVEAEKSITQRQWITYDFLII 174
L VN E S LV+ + ++I I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 175 LYAGLGNKDKIDQIWK---SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ GL DK+++ W+ L + K +R Y ++ G +E E+I + K+
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A EL +++ L + + YN ++T G+ A ++ ++ ++++ PD+ T+ I
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
N+D+ ++ EM S + V Y +++N L +A+ + + A K
Sbjct: 255 VFVKQGNLDEAQELYKEM-IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 218
+TY+ LI + D+ ++++ + Y ++ Y +G L+
Sbjct: 314 P-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 97
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 98 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 154
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 491 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 542
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I+ Y
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 215 GHLKEVGEIIDQWKQ 229
G ++ E+ D ++
Sbjct: 603 GDMRRSLEVFDMMRR 617
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 779
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 780 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 206 CILSSYLMLGHLKEV 220
C+L+S L + E
Sbjct: 839 CLLTSLLSRASIAEA 853
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T T+ L++ + EKA E+ + + + +S N Y ++M Y SVG K
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
++ + + DIFTY + +C + + EMS
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 108/245 (44%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H ++ E++E++++ + N YN +M + G+ + + +E+
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEM 294
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + V +I TYN I + ++ K +D+M D G + + + Y L++ +
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSD-GINPNLITYNTLIDGFCGVGK 353
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A S + ++ +TY+ L+ + G+ ++ K + K + Y
Sbjct: 354 LGKALSLCRDLKSRGLSP-SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYT 412
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ ++ + ++++ ++ ++ + D+ + L+ F G +A+ L++
Sbjct: 413 ILIDTFARMDNMEKAIQLRSPMEELGLTP-DVHTYSVLIHGFCIKGQMNEASRLFKLMVA 471
Query: 266 KNCAP 270
K P
Sbjct: 472 KKLEP 476
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 85/194 (43%), Gaps = 7/194 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +A ++ +++K ++ N + YN ++ + VG++ K + ++
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + + P + TYN+ +S + K + EM + G + Y L++ + +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME-ERGIKPSKITYTILIDTFARMDN 423
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A E +T TY LI + G ++ +++K M +K+
Sbjct: 424 MEKAIQLRSPMEELGLTPDVH-TYSVLIHGFCIKGQMNEASRLFK--LMVAKKLEPNK-- 478
Query: 206 CILSSYLMLGHLKE 219
++ + ++LG+ KE
Sbjct: 479 -VIYNTMVLGYCKE 491
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 93/230 (40%), Gaps = 3/230 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT L+ EKA++LF + + L N Y ++ G ++ + E+++
Sbjct: 201 YTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ 260
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
V P+++TYN ++ K DEM + G S + V Y L+ +
Sbjct: 261 EDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMR-ERGVSCNIVTYNTLIG-GLCREMK 318
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
N + + + + ITY+ LI + G+G K + + L+ + Y
Sbjct: 319 ANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++S + G G+++ + ++ I+ L+ F+ + EKA
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITY-TILIDTFARMDNMEKA 427
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 97
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 98 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 154
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 491 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 542
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I+ Y
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 215 GHLKEVGEIIDQWKQ 229
G ++ E+ D ++
Sbjct: 603 GDMRRSLEVFDMMRR 617
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 2/195 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 658 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 717
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 718 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 776
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 777 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 835
Query: 206 CILSSYLMLGHLKEV 220
C+L+S L + E
Sbjct: 836 CLLTSLLSRASIAEA 850
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY AL+ Y KA E+++ + + N+ + + Y+ +++ GQ E +
Sbjct: 284 STTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFN 343
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+++ VP+ TYN +++CA ++ + ++M+ G + D V Y L++ Y
Sbjct: 344 EMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNA-HGCTPDVVTYTALISAY 399
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+ TYTAL+++ A +++ ++ N N + YN ++ +Y +GQ E+ V
Sbjct: 177 RNVHTYTALMNVCIKCGKLPLALDIYNSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHV 236
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++ +K + V P + TYN I +C + + D G + + Y L++ Y
Sbjct: 237 LDVMKHEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSD-GFTPNSTTYNALISAYG 295
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ L A E + R ITY LI G + +I+ ++ K +
Sbjct: 296 KTTQLGKA-LEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNT 354
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA-NEFH 260
Y ++++ G ++ E+ +Q + D+ L+ A+ G +KA FH
Sbjct: 355 VTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTP-DVVTYTALISAYERGGQWQKALQAFH 413
Query: 261 MLLLQKNCAP 270
+ +Q C P
Sbjct: 414 KMCVQ-GCKP 422
Score = 43.9 bits (102), Expect = 0.085, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 100/248 (40%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YTA + L + ++A EL + ++ N+ N Y +M + + G++ + +
Sbjct: 146 SYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPLALDIYNSM 205
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ N +P++ TYN + ++ LD M + G + ++ N + I A +
Sbjct: 206 RAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHE--GVEPVLRTYNTL---IIACN 260
Query: 146 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ N L ++ ++ TY+ LI Y K ++++ + +
Sbjct: 261 MCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVI 320
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++S+ G + I ++ +Q ++ N L+ A + G EKA E
Sbjct: 321 TYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTY-NSLVTACAQGGQWEKAAEVFEQ 379
Query: 263 LLQKNCAP 270
+ C P
Sbjct: 380 MNAHGCTP 387
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ ++A A + + A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 432 TYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 491
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P++ TYN+ I+ A N + V K +M +G D + Y ++ + H
Sbjct: 492 IENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQV-AGFRPDKITYSIVMEVLGHCGH 550
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
L AE + +E + + + Y L+ L+ GN DK
Sbjct: 551 LDEAE-AVFIEMRRDWAPDEPV-YGLLVDLWGKAGNVDK 587
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 96/247 (38%), Gaps = 4/247 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
TYT ++ + A+ ++L + + +++ + YN ++ Y +++ V E
Sbjct: 360 GHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFE 419
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ PD TY I A +D M + G S D Y +VN
Sbjct: 420 EMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ-EVGLSPDTFTYSAMVNCLGKG 478
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L A E T +TY+ +I L A N + + +++K +++ +
Sbjct: 479 GQLAAAYKLFCEMIENGCTP-NLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 537
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y ++ GHL E + + ++ D + L+ + G +KA ++ +
Sbjct: 538 YSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGL--LVDLWGKAGNVDKALGWYQAM 595
Query: 264 LQKNCAP 270
LQ P
Sbjct: 596 LQDGLQP 602
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 101/232 (43%), Gaps = 24/232 (10%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++H Y A + ++A ++FE ++++ + + Y ++ ++ G ++ + +
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PD FTY+ ++ + K EM ++G + + V Y ++ + A +
Sbjct: 457 QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM-IENGCTPNLVTYNIMIALQAKARN 515
Query: 146 LVNAESSTLVEAEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
N +V+ K + + ITY ++ + G+ D+ + ++ +R
Sbjct: 516 YEN-----VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-------- 562
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQ---WKQSATSD---FDISACNRLLGAF 247
R++ Y +L L +D+ W Q+ D ++ CN LL AF
Sbjct: 563 RDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAF 614
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A Y L+ L+ A +KA ++ + Q L N N +++ ++ + + + +
Sbjct: 566 APDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYI 625
Query: 81 VVEEIKRKNVVPDIFTYNLWISSC 104
V++ + + +VP + TY L +S C
Sbjct: 626 VLQNMLAQGLVPSVQTYTLLLSCC 649
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+ ++H + + ++AEEL +++ + Y+ MM Y + +K +V E +K
Sbjct: 377 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK 436
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
P I +Y I+ + + EM G + Y L++ +I
Sbjct: 437 ECCFTPSIISYGCLINLYIKIGKVTKAIAISKEME-SYGIKHNNKTYSMLISGFIHLHDF 495
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
NA S E KS Q Y+ LI + +GN D+ +I + ++ + + ++R +
Sbjct: 496 ANA-FSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 554
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATS 233
I+ + + G +K I+D ++S +
Sbjct: 555 IIEGFAVAGDMKRALNILDLMRRSGCA 581
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA KA E F ++K+ L + +Y ++ G+++ V E+
Sbjct: 621 TYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREM 680
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + F YN+ I A ++ + + +M D G + Y + +N A
Sbjct: 681 STQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED-GVPPNIHTYTSYINACCKAGD 739
Query: 146 LVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A+ ++E + + + TY LI +A D+ + ++ +++ K Y
Sbjct: 740 MQRAQK--VIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAY 797
Query: 205 ICILSSYL 212
C+++S L
Sbjct: 798 HCLVTSLL 805
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/293 (19%), Positives = 112/293 (38%), Gaps = 38/293 (12%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
FE +P ++ + ++ YA A FE ++ + NA ++ ++ Y
Sbjct: 261 FERIPKPSR--REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR 318
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+ V VEE+K + + I TY++ I+ A + E G + + Y
Sbjct: 319 DMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGII-Y 377
Query: 134 VNLVNIYITASHLVNAE-----------------------SSTLVEAEKS---ITQR--- 164
N+++ + + ++ AE T+++ EK + +R
Sbjct: 378 SNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKE 437
Query: 165 -----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
I+Y LI LY +G K I K + K ++ Y ++S ++ L
Sbjct: 438 CCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFAN 497
Query: 220 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
I ++ +S D + N L+ AF +G ++A + ++ P+N
Sbjct: 498 AFSIFEEMLKSGLQP-DRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSN 549
>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
Length = 388
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 10/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL--MYNEMMTLYMSVGQVEKVALVVE 83
TY L+ ++ + + A EL E++ S + + YN ++ + V V K ++E
Sbjct: 48 TYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILE 107
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ PD+ TYN IS D + + EM + + + Y ++N +
Sbjct: 108 LMIDSGCKPDVVTYNTLISGLCKLRRADDALQLMREME----PAPNTITYNTVINGLWRS 163
Query: 144 SHLVNAESSTLVEAEKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ E+ L++ S+ + TY+ +I +K ++ +R K +
Sbjct: 164 RK--DTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEV 221
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
+ ++ +L L++ G +D W A D+ + +LL A D G +KA E L
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLD-WMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNL 280
Query: 263 LLQKNCAPT 271
++ + APT
Sbjct: 281 MVDRGYAPT 289
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P K+ YT LL+ +KA E+F + + + YN ++ +V
Sbjct: 250 GIPSDVKS---YTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRV 306
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 112
E ++ E++ + + PD+ +Y I A ID+
Sbjct: 307 EHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDE 343
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ Y ++L T +A EL +V + +S + +MYN +++ + QV + + E+
Sbjct: 447 DAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 506
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K+ PDIFTYN+ ISS + + + +E+ S D + Y +L+N
Sbjct: 507 MKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELE-SSDCKPDIISYNSLINCLGKNG 565
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL--RMTKQ 197
+ A L +K + +TY LI + G DK+ ++ +SL RM Q
Sbjct: 566 DVDEAHMRFLEMQDKGLNP-DVVTYSTLIECF---GKTDKV-EMARSLFDRMITQ 615
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + E++ LFE + + N + YN M+ G V+K L+ +
Sbjct: 311 TYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNM 370
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ N P+ FTY++ ++ A + ++ + L+
Sbjct: 371 IKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLE 403
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 38/247 (15%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
TY+ L++ + + +++E +K+S + NA YN +++ Y + G V+K V
Sbjct: 228 PHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFA 287
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ K + + TYN+ I + + KKF + VK V+ VN
Sbjct: 288 EMREKGIACGVMTYNILIGG------LCRGKKF-----------GEAVKLVHKVN----- 325
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
K +TY+ LI + +G D +++ L+ + T
Sbjct: 326 ---------------KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y +++ Y + +L +++ + ++ + ++ L+ AF+ + TEKA E H L+
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY-TILIDAFARLNYTEKACEMHSLM 429
Query: 264 LQKNCAP 270
+ P
Sbjct: 430 EKSGLVP 436
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ + + A LF+ +K++ L A +Y +M +Y +G+VE+ +V E+
Sbjct: 233 TYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEM 292
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + VP ++TY I + ++ M D G D V NL+NI +
Sbjct: 293 RMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKD-GCKPDVVLMNNLINILGRSDR 351
Query: 146 LVNA 149
L A
Sbjct: 352 LKEA 355
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P Y +L++ AK E A ELF+ +K++ S + +Y M+ + G+
Sbjct: 436 KGFP---PCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGR 492
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQ 112
+ + E+K+ +PD++ YN I+ +D+
Sbjct: 493 FNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDE 530
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 15/177 (8%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P + SE + ++ + K KA +F +VK A YN ++ + M G EK
Sbjct: 155 PCAIGPSE-LSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEK 213
Query: 78 VALVVEEI-KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
V + E+ + PD TY+ IS+ D + DEM ++G Y L
Sbjct: 214 VHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMK-ENGLQPTAKIYTTL 272
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIW 189
+ IY + E+ LV + R+ + TY LI GLG +++ +
Sbjct: 273 MGIYFKLGKV--EEALNLVH---EMRMRRCVPTVYTYTELI---RGLGKSGRVEDAY 321
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 9/219 (4%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
E+AE + + V++S +S + YN M+T Y +K A +VE+++ +++VPD TY+
Sbjct: 153 EEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCM 212
Query: 101 ISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
I +C + + + EM S+ + L++ Y A V + E
Sbjct: 213 IGACGRVGKLKEALSWFAEMKRLEIKPASSN----FNTLISPYGKAKD-VEGIVRVITEM 267
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
+K + W T D + Y G + +I LR + +Y +L YL
Sbjct: 268 KKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLP 327
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
KE I +++ + + C L+ F D + + A
Sbjct: 328 KEALRIFLAMRKAGMAPKEY-MCRSLICTFRDAEMFDGA 365
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E Y ++L Y A EK ++ R++ S + + YN ++ Y + ++ +
Sbjct: 591 EAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINTYGKNYMIAEMETLFRT 650
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + VVPD +TYN I + D+ + M D+G S D V Y+ LV+ + A
Sbjct: 651 MQEEGVVPDRWTYNTIIRTYGFADYPDRAVYWFKAMQ-DAGISPDRVTYMILVSTFERAG 709
Query: 145 HLVNA 149
++ A
Sbjct: 710 NIDEA 714
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ Y A +KA L E++++ +L +++ Y+ M+ VG++++ E+K
Sbjct: 174 YNSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMK 233
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R + P +N IS +++ + + + EM G DW V Y A +
Sbjct: 234 RLEIKPASSNFNTLISPYGKAKDVEGIVRVITEMK-KYGCKPDWQTLDAAVRAYDRAGLI 292
Query: 147 VNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ + E + W+ +Y L+ +Y + +I+ L M K M +
Sbjct: 293 KD-----VTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIF--LAMRKAGMAPK 345
Query: 203 NYIC 206
Y+C
Sbjct: 346 EYMC 349
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+++ L+H YA + E ++ + + YN ++ Y GQ+EKV+ V+ +
Sbjct: 557 SFSTLVHAYAKKQDFPNMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARM 616
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + D+ +YN+ I++ I +++ M + D W Y ++ Y A +
Sbjct: 617 ENSGMRMDLASYNILINTYGKNYMIAEMETLFRTMQEEGVVPDRWT-YNTIIRTYGFADY 675
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A + I+ + +TY L+ + GN D+ + W LRM++ T
Sbjct: 676 PDRAVYWFKAMQDAGISPDR-VTYMILVSTFERAGNIDEAAR-W-CLRMSQAGYT 727
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E+ ++++Y ++AE LF ++ S + YN M+ +YM E V +
Sbjct: 382 ESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKL 441
Query: 85 IKRKNVVPDIFTYNLWISSC 104
++ +++PD +TY+ + C
Sbjct: 442 MEEDHLLPDAYTYHSMLRMC 461
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 92/203 (45%), Gaps = 3/203 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+T +A +H ++A ++F +K+ L + Y+ +++ + G+VEK + +E
Sbjct: 326 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 385
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K + P+IF YN + + +I + +K D M + G D V Y +++ Y +
Sbjct: 386 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP-EKGLEPDSVTYSTMIDGYCKSE 444
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
++ A S E Q Y+ L+ G+ +K +++ + + K T+ ++
Sbjct: 445 NVAEA-FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSF 502
Query: 205 ICILSSYLMLGHLKEVGEIIDQW 227
++ Y ++E ++ +
Sbjct: 503 NTLIDGYCKSCKIQEASQLFQEM 525
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y A+++ K A +L E++ S L N ++Y+ ++ Y S G++E+ +++ +
Sbjct: 152 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V PDIF YN IS + +++ +L E+ G D V + + Y
Sbjct: 212 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ-GRGLKPDAVTFGAFILGYSKTGK 270
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + + + Y LI + GN + I++ L +
Sbjct: 271 MTEAAKYFDEMLDHGLMPNNPL-YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCS 329
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+ L G ++E ++ + K+ D+ + L+ F G EKA E H +
Sbjct: 330 AFIHGLLKNGRVQEALKVFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKAFELHDEMCL 388
Query: 266 KNCAP 270
K AP
Sbjct: 389 KGIAP 393
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 103/249 (41%), Gaps = 7/249 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S T+ L+ Y +A EL + +++ NL +A+ Y M+ + ++E
Sbjct: 115 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 174
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ + P++ Y+ I A+ I++ ++ LD MSC SG + D Y +++ A
Sbjct: 175 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC-SGVAPDIFCYNAIISCLSKA 233
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A S+ L+E + + +T+ I+ Y+ G + + + M + N
Sbjct: 234 GKMEEA-STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD--EMLDHGLMPNN 290
Query: 204 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y +++ + G+L E I D+ C+ + G ++A +
Sbjct: 291 PLYTVLINGHFKAGNLMEALSIFRHLHALGVLP-DVQTCSAFIHGLLKNGRVQEALKVFS 349
Query: 262 LLLQKNCAP 270
L +K P
Sbjct: 350 ELKEKGLVP 358
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 10/253 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ALLH YA A + LF + + + ++N ++ Y +G ++K L+ E++
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 425
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ V PDI T++ IS+ +D + + M D+G D Y L+
Sbjct: 426 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM-IDTGVPPDTAVYSCLIQGQCNRRD 484
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLG----NKDKIDQIWKSLRMTKQKMTS 201
LV A+ K I + +I G KD +D I T Q+
Sbjct: 485 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH----TGQRPNL 540
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
+ ++ Y ++G++KE ++D +S + DI N L+ + G + A
Sbjct: 541 ITFNSLVDGYCLVGNMKEAVGLLDSM-ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFR 599
Query: 262 LLLQKNCAPTNAS 274
+L K T+ S
Sbjct: 600 DMLHKRVTLTSVS 612
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L++ K +KAE + ++ + + N + YN ++ Y + G ++ V +E+
Sbjct: 261 TYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM 320
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+VPD+ N ++++ I + + D M G D + Y L++ Y TA
Sbjct: 321 SSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVL-KGPKPDVISYGALLHGYATAGC 379
Query: 146 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 202
+ ++ ++ E + R ++ LI YA LG DK +++ MTKQ +
Sbjct: 380 IAGMDNLFNVMVCEGVVPDRH--VFNTLINAYARLGMMDKSLLMFED--MTKQGVNPDII 435
Query: 203 NYICILSSYLMLGHLKEVGE----IIDQWKQSATSDFDI---SACNR 242
+ ++S++ LG L + E +ID T+ + CNR
Sbjct: 436 TFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P +A T TY L++ Y A+ + +F R+ ++ L + YN ++ + G+V+K
Sbjct: 183 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 242
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ +++ + ++P++ TY+ I+ T +D+ ++ L +M +G + + Y L+
Sbjct: 243 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM-VGAGVRPNNMTYNCLI 301
Query: 138 NIYITA 143
+ Y T+
Sbjct: 302 HGYSTS 307
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 103/236 (43%), Gaps = 3/236 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ + +L ++A T+ A +F+ + + + N +++ + G+ K LV
Sbjct: 185 SPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVY 244
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E++ ++PDIF+Y + +++ +D+ F+ EM S + V Y +L++ Y++
Sbjct: 245 EQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEME-RSCCEPNVVTYNSLIDGYVS 303
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ A+ + +EK I + TY LI Y G ++ +++ + +
Sbjct: 304 LGDVCGAKKVLALMSEKGIPENSR-TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEH 362
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
Y ++ +Y G + + I D + + CN L+ + +G KA E
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLK-MNTVICNSLINGYCKLGHVNKAAE 417
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
Y L+H Y A + A + + + + L N ++ N ++ Y +G V K A V+
Sbjct: 362 HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K N+ PD + YN + + + K DEM + G + V Y L+
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH-NKGVNFTVVTYNTLLKNLFHVG 480
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
H+ +A + ++ + + +TY L+ + +G D+ IWK
Sbjct: 481 HVEHALHIWNLMHKRGVAPNE-VTYCTLLDAFFKVGTFDRAMMIWK 525
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT +++ Y ++A + +++S N + YN ++ Y+S+G V V+ +
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + + TY L I ++Q +K + M + D+ V Y L++ Y TA
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHV-YGVLIHAYCTAGR 376
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A + + I + LI Y LG+ +K ++ S++ K S Y
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVIC-NSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+L + + ++ D+ +F + N LL VG E A L+ +
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGV-NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494
Query: 266 KNCAPTNAS 274
+ AP +
Sbjct: 495 RGVAPNEVT 503
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ YA A + +LF+ +K S N+ YN ++ Y G ++ + +E+
Sbjct: 90 TYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM 149
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
D+ TYN+ I+ ++ +++ LDEM G D V Y L+++Y S+
Sbjct: 150 DGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDT-KGVPPDQVTYNTLLDVYAKKSY 208
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
V A E W TY+ ++
Sbjct: 209 FVKAHEILREMTEAGYRPNIW-TYNIML 235
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Query: 12 RYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
R E + S K + Y L++ + E AE++ + +KQ +S N + Y ++ Y
Sbjct: 39 RLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEY 98
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+ G+++ + +E+K K P+ +TYN I + + DEM D G
Sbjct: 99 ANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM--DGVGCAK 156
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
V N+ L+ L E + +TY+ L+ +YA K +I
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEIL 216
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
+ + + Y +LSS + E ++ + K +I + +L +
Sbjct: 217 REMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVP-NIVTYSAMLSLYGR 275
Query: 250 VGLTEKANEFHMLLLQKNCAP 270
GL +A + +++ C P
Sbjct: 276 HGLYTEAAKLWDEMIEAGCIP 296
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ Y ++A EL++ + + + YN + +Y G +E + +++E+
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM 184
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD TYN + A + + L EM+ + W NI ++++
Sbjct: 185 DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWT-----YNIMLSSAR 239
Query: 146 LVN--AESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
AE++ L E KS +TY ++ LY G + ++W +
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ SY G +E ++S D L+ A+ G +A +
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQDMRKSGIVP-DTKIYTALMDAYGKAGRCREAELLYFE 358
Query: 263 LLQKNCAP 270
+ ++ P
Sbjct: 359 MTKEGFVP 366
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 83/201 (41%), Gaps = 4/201 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
AK TY + +Y E E L + + + + + YN ++ +Y K
Sbjct: 155 AKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHE 214
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+ P+I+TYN+ +SS ++ + + + + G + V Y ++++Y
Sbjct: 215 ILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK-SKGVVPNIVTYSAMLSLY 273
Query: 141 ITASHLVNAESSTL-VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
H + E++ L E ++ I Y LI Y G + ++ +R +
Sbjct: 274 --GRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVP 331
Query: 200 TSRNYICILSSYLMLGHLKEV 220
++ Y ++ +Y G +E
Sbjct: 332 DTKIYTALMDAYGKAGRCREA 352
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 23 TSETYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TYT ++H Y K + A L E +K+S + ++YN ++ ++ G++E +
Sbjct: 16 TVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKI 75
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++++K+ V ++ TY I A + +K EM D G S + Y L+ Y
Sbjct: 76 LDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMK-DKGESPNSWTYNALIQGY 133
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ ++A + + E A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 435 TYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 494
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P++ TYN+ I+ A N D V K +M +G D + Y ++ + H
Sbjct: 495 IDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQI-AGFRPDKITYSIVMEVLGHCGH 553
Query: 146 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDK 184
L AE+ L +R W Y L+ L+ GN DK
Sbjct: 554 LDEAEAVFLE------MRRDWAPDEPVYGLLVDLWGKAGNVDK 590
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 93/245 (37%), Gaps = 4/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + AK +L + + N + YN ++ Y + + V EE+
Sbjct: 365 TYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFEEM 424
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD TY I A + ++ M + G S D Y +VN
Sbjct: 425 EGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQ-EVGLSPDTFTYSAMVNCLGKGGQ 483
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A E + +TY+ +I L A N D + ++++ +++ + Y
Sbjct: 484 LA-AAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYS 542
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ GHL E + + ++ D + L+ + G +KA ++ +LQ
Sbjct: 543 IVMEVLGHCGHLDEAEAVFLEMRRDWAPDEPVYGL--LVDLWGKAGNVDKALGWYHAMLQ 600
Query: 266 KNCAP 270
P
Sbjct: 601 DGLQP 605
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 124/316 (39%), Gaps = 73/316 (23%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ A ++A+ELF ++ + S N + YN ++ +E+ ++EE+
Sbjct: 47 TYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 106
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN-IY---- 140
K PD TYN +S + + K+F D M G S D V Y L++ +Y
Sbjct: 107 ASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMP-SRGYSPDVVAYNGLLDALYKEGK 165
Query: 141 ----------------------ITASHLVNA-----ESSTLVEAEKSITQRQW----ITY 169
IT + L++ ++ ++ K + + + +TY
Sbjct: 166 VAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTY 225
Query: 170 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 229
+ +++ A N D+ ++++K + + Y +LS + +G++ E+ ++ +
Sbjct: 226 NSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE 285
Query: 230 SATSDFDISACNRL----------------------LGAFSDV-------------GLTE 254
S D+ CN + +GA DV L +
Sbjct: 286 KRFSP-DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344
Query: 255 KANEFHMLLLQKNCAP 270
KA+E ++ CAP
Sbjct: 345 KAHELFSTMVDNGCAP 360
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A TY+ +L + + EL+E + + S + L+ N ++ + +V+
Sbjct: 254 APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK 313
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
V+EE+ + VPD+ TYN+ + T +D+ + M D+G + D V Y ++N
Sbjct: 314 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV-DNGCAPDIVSYSVVLN 370
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL +KA ELF + + + + + Y+ ++ +V ++ + +
Sbjct: 329 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 388
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+ +VPD+ T+N+ + +D+ K LD MS
Sbjct: 389 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMS 424
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 17/221 (7%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
+ + Y+ +++ G+V + +VEE+ K V PD+ TY + + +D+ +
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELF 68
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
+M + G S + V Y L+N ++ A L E + ITY+ ++
Sbjct: 69 HKM-IERGCSANTVAYNALINGLCKDENIERA-YKLLEEMASKGYEPDNITYNTILSGLC 126
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY-LMLGHLKEVGEIIDQWKQSATSDF- 235
+G + Q + S M SR Y + +Y +L L + G++ + W T D
Sbjct: 127 RMGKVSEAKQFFDS-------MPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179
Query: 236 ------DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
D+ N L+ F V T++A + ++ K P
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMP 220
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T T L+H K T++A LF+ + + + L +N ++ G++ + L + +
Sbjct: 434 TCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSM 493
Query: 86 KRKN--VVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ + PD+ TY +++ +DQ + +M+ SG + D+V Y L+N
Sbjct: 494 VKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT-GSGCAPDYVAYNTLMNGLRKQ 552
Query: 144 SHLVNAESSTLVEAEKS 160
+ A+ T EK
Sbjct: 553 GRHIQADRLTQAMKEKG 569
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 99/232 (42%), Gaps = 2/232 (0%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A + + +++ L N + Y+ +M Y +GQ E ++ ++ K + P++ TY L +
Sbjct: 183 AADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVK 242
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
+++ +K + E+ + D V Y L+N Y + +A + E +
Sbjct: 243 GYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDA-NRVRDEMIDAGV 301
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
Q Y+ +I Y LG +++++ ++ + +Y ++ Y G + + E
Sbjct: 302 QVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFE 361
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
D ++ + ++ N LL F G + A + L+L++ P S
Sbjct: 362 TCDMMVRNGFTGTTLTY-NTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEIS 412
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
K + E + N +M+N ++ +G+V + E++K K +PD FTY+ I
Sbjct: 629 KVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLI 688
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
C+A+ +ID DEM + + + V Y +L+ + ++ A S K I
Sbjct: 689 HGCSASGSIDLAFGLRDEM-LSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGI 747
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
+ ITY+ LI + GN + ++ + + + T Y ++ G+++E
Sbjct: 748 SPNA-ITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAI 806
Query: 222 EIIDQ 226
+++DQ
Sbjct: 807 KLLDQ 811
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 19 LSAKTSE---TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
LSA+ + TY +L++ + +A LF +++ +S NA+ YN ++ + G
Sbjct: 708 LSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNT 767
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
+ + +++ ++ + P +FTY + I +++ K LD+M ++ +++ Y
Sbjct: 768 TEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQM-IENNVDPNFITYWT 826
Query: 136 LVNIYITASHL 146
L+ Y ++
Sbjct: 827 LIQGYARCGNM 837
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 91/227 (40%), Gaps = 15/227 (6%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
+ K+ + FE L + + TY++L+H + + + A L + + + L+ N
Sbjct: 656 LCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPN 715
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ YN ++ V + + +++ K + P+ TYN I N + K
Sbjct: 716 IVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQ 775
Query: 119 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAG 178
+M G Y L++ T ++ A L + ++ +ITY LI YA
Sbjct: 776 KM-IKEGIQPTVFTYTILIHGLCTQGYMEEA-IKLLDQMIENNVDPNFITYWTLIQGYAR 833
Query: 179 LGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
GN I +++ + +IC L GH+K+ +++
Sbjct: 834 CGNMKAITKLYNEM-----------HICGLLPANWTGHVKQAEPVVN 869
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/205 (17%), Positives = 81/205 (39%), Gaps = 2/205 (0%)
Query: 54 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 113
+ SF+A ++ ++ + GQ++ V +E+ + + + N ++ +I
Sbjct: 89 DFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTA 148
Query: 114 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
+M C DD+ + + Y + +A + L E E+ + Y ++
Sbjct: 149 VAVFQQMRCAGTLPDDFTVAI-MAKAYCRDGRVAHA-ADFLKEMEEMGLDVNLVAYHAVM 206
Query: 174 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y +G + ++ SL++ Y ++ Y G ++E +++ + K++
Sbjct: 207 DGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKI 266
Query: 234 DFDISACNRLLGAFSDVGLTEKANE 258
D A L+ + G E AN
Sbjct: 267 VIDEVAYGALINGYCQRGRMEDANR 291
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+ + ++L A+ T +A +L + + ++ + MYN + + + QV ++ + ++
Sbjct: 148 DAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDK 207
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K V PD+FTYN+ ISS +D+ + +EM DS D + Y +++N
Sbjct: 208 MKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMD-DSSCKPDVITYNSMINCL---- 262
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKID 186
++ L EA Q YD + Y+ L G +K+D
Sbjct: 263 ----GKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVD 304
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ + +KA ELFE + S+ + + YN M+ G +++ ++ +++
Sbjct: 219 TYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDM 278
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ K PD+FTY++ I + +D DEM
Sbjct: 279 QEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM 313
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 28/256 (10%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + A K E + N + YN ++ V+K ++ ++
Sbjct: 12 TYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAIFMLSKM 71
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P+ FTY++ + A + ++ + LD S G + Y LV + H
Sbjct: 72 IESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICS----GHLNRSVYSYLVKALCKSGH 127
Query: 146 LVNAESSTLVEAEKSITQRQWITY-----DFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A S+ R W ++ D + + L N +K + L M +K
Sbjct: 128 ASEAH---------SVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGI 178
Query: 201 SRN---YICILSSYLMLGHLKEV---GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
+ + Y I S+ LG LK+V + D+ K + + D+ N ++ +F VGL +
Sbjct: 179 TTDVGMYNIIFSA---LGKLKQVSFMSSLYDKMKANGVAP-DVFTYNIMISSFGRVGLVD 234
Query: 255 KANEFHMLLLQKNCAP 270
KA+E + +C P
Sbjct: 235 KASELFEEMDDSSCKP 250
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 13/226 (5%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 79
S + +T+ ++ YA A+ ++A E FE++ L + YN ++ + QV+K
Sbjct: 184 SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAH 243
Query: 80 LVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+ +E+KRK +PD+ TY + + ++ +K EM D+G D V Y L++
Sbjct: 244 AIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM-LDAGIKPDVVAYGMLIS 302
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ- 197
+ + A E E+S Y LI GLG+ +++D+ K +++K+
Sbjct: 303 AFCKSGKCDEA-IKVFHEMEESGCMPSPHVYCMLI---NGLGSMERLDEALKYFQLSKES 358
Query: 198 --KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA----TSDFDI 237
M ++ +Y +++D+ ++S T +DI
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 108/247 (43%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y ++ K + AE+LF+ + ++ N + YN ++ Y VGQ+E+ + E +
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM 278
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K +NV P I T+N ++ +++ ++ L+EM G D Y L + ++
Sbjct: 279 KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEV-YGFVPDRFTYTTLFDGHLKCG- 336
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGL--GNKDKIDQIWKSLRMTKQKMTSRN 203
N ++S + E Q + Y I+L A GN +K +++ K
Sbjct: 337 --NVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVF 394
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+ I++ Y +G + + I++ + ++ N L+ F ++ E+A + +
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTY-NSLVKKFCEMKNMEEAEKCIKKM 453
Query: 264 LQKNCAP 270
++K P
Sbjct: 454 VEKGVLP 460
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 14/237 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ +AE L + + LSF+ + YN +++ Y S G V+K + E +
Sbjct: 569 TYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETM 628
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + P + TY+ I+ C + V+K EM D V Y L++ Y+
Sbjct: 629 KKSGIKPTLNTYHRLIAGCGKE-GLVLVEKIYQEM-LQMNLVPDRVIYNALIHCYVEHGD 686
Query: 146 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A S + +EA+ Q +TY+ LI+ + G K+ + +++ + Y
Sbjct: 687 VQKACSLHSAMEAQG--IQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETY 744
Query: 205 ICILSSYLMLGH--LKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKAN 257
L++GH LK+ +++ + F +S C+ L+ + G + A+
Sbjct: 745 -----DILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDAD 796
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 33/212 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ + K E+AE+ +++ + + N YN ++ Y ++ ++EE+
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM------------------SCDSGGS 127
++K + P++ +Y I+ NI + + L +M SC +G
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548
Query: 128 DDWVKYVN------LVNIYITASHLVNA--ESSTLVEAEK---SITQR----QWITYDFL 172
D ++ + +V +T + L+N + ++EAE IT++ ITY+ L
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
I Y+ GN K +++++++ + K T Y
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGIKPTLNTY 640
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 17/241 (7%)
Query: 38 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 97
K E +LF + +S L + MY + + + +G +++ ++ +KR V P +F Y
Sbjct: 161 KRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVY 220
Query: 98 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
N+ I + +K DEM D + + + Y L++ Y L E
Sbjct: 221 NVVIGGLCKEKRMKDAEKLFDEM-LDRRVAPNRITYNTLIDGYCKVGQL---------EE 270
Query: 158 EKSITQRQWI-TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML-- 214
+I +R + + II + L N Q+ + + ++M ++ +Y L
Sbjct: 271 AFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFD 330
Query: 215 GHLK--EVGEIIDQWKQSATSDFDI--SACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
GHLK V I +++ I C+ LL A G EKA E L+ AP
Sbjct: 331 GHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAP 390
Query: 271 T 271
Sbjct: 391 V 391
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ +++ Y KA E+++ L N + YN ++ + + +E+ ++++
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K V+P++ TYN I + D+ + L+EM G + + Y L+N +++
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME-KKGLKPNVISYGCLINCLCKDANI 513
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
+ AE + + I Y+ LI G K+ ++ +M +R +
Sbjct: 514 LEAEVILGDMVHRGVVPNAQI-YNMLI---DGSCIAGKLKDAFRFF----DEMVAREIVP 565
Query: 207 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
L +Y +L G + E + + + S FD+ N L+ +S G +KA E
Sbjct: 566 TLVTYNILINGLCKKGKVMEAENLASEITRKGLS-FDVITYNSLISGYSSAGNVQKALEL 624
Query: 260 HMLLLQKNCAPT 271
+ + + PT
Sbjct: 625 YETMKKSGIKPT 636
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 13/226 (5%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 79
S + +T+ ++ YA A+ ++A E FE++ L + YN ++ + QV+K
Sbjct: 184 SCLSKDTFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAH 243
Query: 80 LVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+ +E+KRK +PD+ TY + + ++ +K EM D+G D V Y L++
Sbjct: 244 AIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQEM-LDAGIKPDVVAYGMLIS 302
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ- 197
+ + A E E+S Y LI GLG+ +++D+ K +++K+
Sbjct: 303 AFCKSGKCDEA-IKVFHEMEESGCMPSPHVYCMLI---NGLGSMERLDEALKYFQLSKES 358
Query: 198 --KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA----TSDFDI 237
M ++ +Y +++D+ ++S T +DI
Sbjct: 359 GFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++ L++ + E+A + FER+K + + + YN ++ +Y VG+V + + E++
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKL 239
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K N D TY + A + + + + EM DSG S + V +N + ++ +
Sbjct: 240 KSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMR-DSGSSPNAV-IMNTLMGTLSKAG 297
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN E S +T L+ +Y +G D+ +++++L+ K Y
Sbjct: 298 KVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYN 357
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + + G +++ +I+ + K++
Sbjct: 358 SLMKACVEGGRVEQAEDILKEMKRAG 383
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
++K ++ ++ F + S + T T + L+ +Y ++A E++E +K +
Sbjct: 293 LSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCD 352
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+YN +M + G+VE+ +++E+KR PD TY +++ A +D ++ D
Sbjct: 353 VAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFD 412
Query: 119 EMSCDSGGSD 128
++ +G D
Sbjct: 413 KVVALNGKPD 422
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 106/229 (46%), Gaps = 8/229 (3%)
Query: 38 KWTEKAEELFE--RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 95
+W EKA FE + + N YN M+ + + Q+E +VEE+ + + PD +
Sbjct: 121 RW-EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNY 179
Query: 96 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 155
T++ I+ ++ K+ + M + G D V Y +++++Y VN E+ L
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSE-GIVPDEVTYNSVIDMYGRVGR-VN-EAVELY 236
Query: 156 EAEKSITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
E KS+ + +TY + +YA G+ I Q+ + +R + + ++ +
Sbjct: 237 EKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKA 296
Query: 215 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
G + + ++ ++ + S S ++ + L+ ++ VG ++A E + L
Sbjct: 297 GKVNQAKKVFNEMRTSGVSPTPVT-LSILVEMYTRVGAYDQAFEVYETL 344
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +L+ E+AE++ + +K++ + + L Y M Y + G V+ + +++
Sbjct: 356 YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N PD + + I +C I+Q K DEM
Sbjct: 416 ALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEM 449
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 98/249 (39%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L + + E +E+L E + + + ++ ++ Q E+ E +
Sbjct: 145 TYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERM 204
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW----VKYVNLVNIYI 141
K + +VPD TYN I +++ + +++ S +W V Y + N+Y
Sbjct: 205 KSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK-----SVNWKLDTVTYGAIANVYA 259
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
A + + E S + + + L+ + G ++ +++ +R + T
Sbjct: 260 RAGDY-QSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTP 318
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
++ Y +G + E+ + K D++ N L+ A + G E+A +
Sbjct: 319 VTLSILVEMYTRVGAYDQAFEVYETLKTEGWK-CDVAVYNSLMKACVEGGRVEQAEDILK 377
Query: 262 LLLQKNCAP 270
+ + C P
Sbjct: 378 EMKRAGCNP 386
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K F +H E +G+ T TYT+L+++ T +A+ELFE+V + + +M
Sbjct: 415 KAFALHD-EMMTDGI---QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N +M + ++G +++ +++E+ ++ PD TYN + ++ ++ + EM
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK- 529
Query: 123 DSGGSDDWVKYVNLVNIY 140
G D + Y L++ Y
Sbjct: 530 RRGIKPDHISYNTLISGY 547
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 14/214 (6%)
Query: 48 ERVKQSNL----SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
E VKQ + ++N L++ L+M ++E +++ EI+ K +V D TYN+ I+
Sbjct: 352 EMVKQGMVPTFYTYNTLIHG----LFME-NKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 104 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 163
+ + DEM D G Y +L IY+ E+ L E
Sbjct: 407 YCQHGDAKKAFALHDEMMTD-GIQPTQFTYTSL--IYVLCRKNKTREADELFEKVVGKGM 463
Query: 164 RQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
+ + + L+ + +GN D+ + K + M Y C++ G +E E
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ + K+ IS N L+ +S G T+ A
Sbjct: 524 LMGEMKRRGIKPDHISY-NTLISGYSKKGDTKHA 556
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ ++ E A + +K + YN +++ + G+ +V + E+
Sbjct: 262 TYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV---LREM 318
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K +VPD +YN+ I C+ +++ + DEM G + Y L++ +
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM-VKQGMVPTFYTYNTLIHGLFMENK 377
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
+ AE EK I +TY+ LI Y G+ K
Sbjct: 378 IEAAEILIREIREKGIVL-DSVTYNILINGYCQHGDAKK 415
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT +H AK KA E++E +K + +A Y+ ++ + G+++ V E++
Sbjct: 341 TYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDM 400
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
K++ V PD+ TYN I+S L + K L M DS D
Sbjct: 401 KKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPD 443
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+++ LLH Y A+ + A ++ + + + N + Y + LY + V + E
Sbjct: 270 QSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSE 329
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD--EMSCDSGGSDDWVKYVNLVNIYIT 142
++ K+ P++ TY +++ + QV K L+ EM + D Y +L+ +
Sbjct: 330 MQEKSCKPNVITYTIFMHALGKA---KQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQ 386
Query: 143 ASHLVNA 149
+ L +A
Sbjct: 387 SGRLKDA 393
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 109/268 (40%), Gaps = 36/268 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ + + A + + + S N ++Y ++ ++ + V++E+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + + PDIF YN I + +D+ + FL EM ++G + Y ++ YI AS
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASE 537
Query: 146 LVNAES---------------------STLVEAEKSI----TQRQWITYDFL------II 174
+A+ + + EK I R + L +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 175 LYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
L GL DK+D +I++ +R +Y +++ + LG++++ I D+ +
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEF 259
+ ++ N LLG F G EKA E
Sbjct: 658 LTP-NVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++TYT L++ + AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ + + P++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKS 710
Query: 144 SHLVNA 149
L A
Sbjct: 711 GDLAEA 716
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 42/289 (14%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y LL + + EKA+EL + + L NA+ Y ++ Y G + + + +E+K
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 87 RKNVVPDIFTYNLWISSCA-----------------------ATLN--IDQVKKF----- 116
K +VPD F Y + C A N I+ V KF
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 117 -------LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
L + S D G + V Y N++ Y+ + A + + + ITY
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTY-NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 170 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WK 228
L+ Y +G + ++ ++ + Y I++++L G + ++DQ +
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 229 QSATSD---FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++A D IS C LL F+ VG E A + +++ P +A+
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L++ ++ +KA +F+ + + L+ N ++YN ++ + G++EK +++E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 138
K + P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 139 ----IYITASHLVNAESSTL--------------VEAEKSITQRQW------------IT 168
I I ++ SST E + + R +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 169 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
Y+ +I GN + +++ ++ T Y +L+ Y +G E+ + D+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-A 866
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKA 256
+A + D + ++ AF G+T KA
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
EKA+ LF+ + S L A Y ++ Y V + ++ E+K++N+V +TY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ ++ ++D + EM SG + V Y L+ ++ S +A L E ++
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDA-MRVLKEMKEQ 481
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQ 187
Y+ LII GL ++D+
Sbjct: 482 GIAPDIFCYNSLII---GLSKAKRMDE 505
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 106/238 (44%), Gaps = 10/238 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ ++ ++ LF+++++ ++ ++ + G+V+ +++E+
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++ DI YN+ I S +D KF E+ + G D V Y +++ + A+
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANR 288
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
L A EK+ +R TY + ++ G G+ K D+ + L + K + +
Sbjct: 289 LDEA-VEMFEHLEKN--RRVPCTYAYNTMI-MGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y CIL+ +G + E ++ ++ K+ A ++S N L+ G + A E
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDAAP--NLSTYNILIDMLCRAGKLDTAFELR 400
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 107/248 (43%), Gaps = 10/248 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++ + A ++A E+FE ++++ YN M+ Y S G+ ++ ++E
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K +P + YN ++ +D+ K +EM D+ + + Y L+++ A
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA--APNLSTYNILIDMLCRAGK 392
Query: 146 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L T E S+ + + + I+ L K+D+ K+ + +
Sbjct: 393 L-----DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKANEFHML 262
I S LG + V + +++ SD ++ L+ F + G E ++ +
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 263 LLQKNCAP 270
++ +NC+P
Sbjct: 508 MINQNCSP 515
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 53/257 (20%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L++
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
EE+ +K + P+++T+N +L++ +
Sbjct: 681 EELMQKGLTPNLYTWN------------------------------------SLLDALVK 704
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
A + A E T Q +TY LI + +K W+ ++ K ++
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQ-VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC-----------NRLLGAFSDVG 251
+Y ++S G++ E G + D++K A SAC NR + AFS
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFK--ANGGVPDSACYNAMIEGLSNGNRAMDAFS--- 818
Query: 252 LTEKANEFHMLLLQKNC 268
L E+ + + K C
Sbjct: 819 LFEETRRRGLPIHNKTC 835
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 8/211 (3%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S YT+L+ + E ++++ + N S + + N M G+ EK + E
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
EIK + VPD +Y++ I ++ + M + G D Y N+V
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK-EQGCVLDTRAY-NIVIDGFCK 599
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
VN L E + + +TY +I GL D++D+ + K K N
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVI---DGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 204 ---YICILSSYLMLGHLKEVGEIIDQWKQSA 231
Y ++ + +G + E I+++ Q
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY AL+ Y KA E+++ + + N+ + + Y+ +++ GQ E +
Sbjct: 208 STTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFN 267
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+++ N VP+ TYN +++CA ++ + ++M+ G + D V Y L++ Y
Sbjct: 268 EMQQDNCVPNTVTYNSLVTACAQGGQWEKATEVFEQMTAH-GCTPDVVTYTALISAY 323
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 104/249 (41%), Gaps = 3/249 (1%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+ T+TAL+++ A E++ ++ +N N + YN ++ +Y +G+ E+ V
Sbjct: 101 RNVHTFTALMNVCIKCGKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHV 160
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++ +K++ V P + TYN I +C + + D G + + Y L++ Y
Sbjct: 161 LDLMKQEGVEPVLRTYNTLIIACNMCNQPREALAVYQRLLSD-GYTPNSTTYNALISAYG 219
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L A E + +R ITY LI G + +I+ ++ +
Sbjct: 220 KTMQLGKA-LEVYQEMLRQNMERSVITYSSLISACEKAGQWETALRIFNEMQQDNCVPNT 278
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y ++++ G ++ E+ +Q + D+ L+ A+ G +KA +
Sbjct: 279 VTYNSLVTACAQGGQWEKATEVFEQMTAHGCTP-DVVTYTALISAYERGGQWQKALQAFG 337
Query: 262 LLLQKNCAP 270
+ + C P
Sbjct: 338 KMCMQGCKP 346
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 102/248 (41%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YTA + L ++ ++A EL ++Q N+ N + +M + + G++ + +
Sbjct: 70 SYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLALEIYNNM 129
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ N +P++ TYN + ++ LD M + G + ++ N + I A +
Sbjct: 130 RAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQE--GVEPVLRTYNTL---IIACN 184
Query: 146 LVNAESSTLVEAEKSITQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ N L ++ ++ TY+ LI Y K ++++ + + +
Sbjct: 185 MCNQPREALAVYQRLLSDGYTPNSTTYNALISAYGKTMQLGKALEVYQEMLRQNMERSVI 244
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++S+ G + I ++ +Q ++ N L+ A + G EKA E
Sbjct: 245 TYSSLISACEKAGQWETALRIFNEMQQDNCVPNTVTY-NSLVTACAQGGQWEKATEVFEQ 303
Query: 263 LLQKNCAP 270
+ C P
Sbjct: 304 MTAHGCTP 311
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 12/253 (4%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+T+ LL +G K +E+AE FE +++ + + + YN ++ +Y ++EK VVE+
Sbjct: 211 QTFNILL---SGWKQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEK 267
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ +++ PD+ TY I D+ + L+EM + G D Y ++ Y A
Sbjct: 268 MREEDISPDVITYTSIIGGLGLVGQPDKARDILNEMK-EYGCYPDVAAYNAVIRNYCIAK 326
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK-SLRMTKQKMTSRN 203
L +A + A K ++ F + Y + + W RM +
Sbjct: 327 RLGDASNLMDEMASKGLSPNATTYNLFFRVFYWS----NDLRNSWSLYRRMMESGCLPNT 382
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFHM 261
C+ L H ++V + W F I + L D+G +A + +
Sbjct: 383 QSCMFLIRLFRKH-EKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFL 441
Query: 262 LLLQKNCAPTNAS 274
+++K P+N S
Sbjct: 442 QMIEKGHKPSNVS 454
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 104/247 (42%), Gaps = 20/247 (8%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
EKA + + ++ Y++++ + +VEK + +E+KR + PD++TY
Sbjct: 104 EKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTL 163
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEK 159
+ I+Q + + DEM D G + + V Y L++ Y+ L A E ++ +
Sbjct: 164 LDRFCKVGLIEQARNWFDEMQQD-GCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-YICILSSYLMLGHLK 218
+ +TY LI + G +K QI+ ++ K + + Y I+ S L ++
Sbjct: 223 CVP--NIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVV 280
Query: 219 EVGEIID--------QWKQSATSDFDISAC-------NRLLGAFSDVGLTEKANEFHMLL 263
G ++D + + + C + L+ F VG ++A E +
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340
Query: 264 LQKNCAP 270
L C+P
Sbjct: 341 LGHGCSP 347
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ A ++A +L E + N ++Y+ ++ + VG++++ V ++
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P+++TY+ I +D K L +M ++ + + V Y +V+
Sbjct: 341 LGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKML-ENSCAPNVVIYTEMVDGLCKVGK 399
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A L+ EK +TY +I G G ++D+ + L++ K + N+I
Sbjct: 400 TDEAYRLMLMMEEKG-CYPNVVTYTAMI---DGFGKAGRVDRCLELLQLMTSKGCAPNFI 455
Query: 206 ---CILSSYLMLGHLKEVGEIIDQWKQS 230
+++ G L + +++++ KQ+
Sbjct: 456 TYRVLINHCCAAGLLDDAHKLLEEMKQT 483
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 99/267 (37%), Gaps = 30/267 (11%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+H Y + +A E+FE + + N + Y ++ + G+ EK + +
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARM 253
Query: 86 KRKNV-VPDI----------------FTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
K V +PD+ TY + + + + L+ MS + G
Sbjct: 254 KNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLE-GCEP 312
Query: 129 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 188
+ + Y L++ + L A+ + + TY LI L ++D
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVY-TYSSLI---DKLFKDKRLDLA 368
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRL 243
K L + + N + M+ L +VG+ + ++ + ++ +
Sbjct: 369 LKVLTKMLENSCAPNVVIYTE---MVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAM 425
Query: 244 LGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ F G ++ E L+ K CAP
Sbjct: 426 IDGFGKAGRVDRCLELLQLMTSKGCAP 452
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ T++A L +++ N + Y M+ + G+V++ +++ +
Sbjct: 387 YTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMT 446
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-SH 145
K P+ TY + I+ C A +D K L+EM W K++ + I SH
Sbjct: 447 SKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMK-----QTYWPKHIGMYRKVIEGFSH 501
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
A L E + + Y LI
Sbjct: 502 EFVASLGLLAELSEDGSVPILPVYKLLI 529
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY--- 97
E+AE L +++ + +Y+ MM Y V +K +V + +K P + TY
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 98 -NLW--ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTL 154
NL+ + + L + +V K + G + Y ++N ++ NA +
Sbjct: 491 INLYTKVGKISKALEVSRVMK-------EEGVKHNLKTYSMMINGFVKLKDWANA-FAVF 542
Query: 155 VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
+ K + I Y+ +I + G+GN D+ Q K ++ + + T+R ++ I+ Y
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 215 GHLKEVGEIIDQWKQ 229
G ++ E+ D ++
Sbjct: 603 GDMRRSLEVFDMMRR 617
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 2/194 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ YA T KA E F R++ L + Y ++ G+++ V +E+
Sbjct: 658 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 717
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+N+ + F YN+ I A ++ + + +M G D Y + ++ A
Sbjct: 718 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGD 776
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ N + T+ E E + TY LI +A +K ++ ++ K Y
Sbjct: 777 M-NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 835
Query: 206 CILSSYLMLGHLKE 219
C+L+S L + E
Sbjct: 836 CLLTSLLSRASIAE 849
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++LY KA E+ +K+ + N Y+ M+ ++ + V E++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ + PD+ YN IS+ N+D+ + + EM
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ + +A ++F + + + N++ +N ++ +++ G+ EKV V ++
Sbjct: 289 TYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQM 348
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSDDWVKYVNLVNIYIT 142
KR D+ TYN I + N+ + K L+ M+ C S N + I
Sbjct: 349 KRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASS-----FNPIFRCIA 403
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
S VN ++ + +TY+ L+ ++A + D I ++ K + + +
Sbjct: 404 KSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFN 463
Query: 203 NYICILSSYLMLGH 216
Y +++ Y +GH
Sbjct: 464 TYRELIALYCGMGH 477
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++ ++ + + +A+ F+ +K + ++Y ++ + G + + V E+
Sbjct: 220 AFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDISEAESVFREM 278
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + P+++TY++ I + + I + EM D+G + + V + NL+ + H
Sbjct: 279 KMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEM-LDAGCNPNSVTFNNLIRV-----H 332
Query: 146 LVNAESSTLVEAEKSITQRQ----WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L + +++ + + + ITY+FLI + N + ++ S M K T
Sbjct: 333 LRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNS--MAKNDCTP 390
Query: 202 RN------YICILSS------YLMLGHLKEVG 221
+ CI S + M +KEVG
Sbjct: 391 NASSFNPIFRCIAKSQDVNGAHRMFARMKEVG 422
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/218 (18%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
S T+ L+ ++ A TEK +++ ++K+ + + + YN ++ + + + V
Sbjct: 320 PNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKV 379
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ + + + P+ ++N A + +++ + M + G + V Y L+ ++
Sbjct: 380 LNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMK-EVGCKPNTVTYNILMRMFA 438
Query: 142 TASHLVNAESSTLV-----EAEKSITQRQWITYDFLIILYAGLGN--------KDKIDQI 188
+S+ ++ E ++ + + TY LI LY G+G+ ++ ID+
Sbjct: 439 V------PKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEK 492
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
M KM +L G LK+ E++D+
Sbjct: 493 CIKPSMPLYKM-------VLEELRKAGQLKKHEELVDK 523
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+T +A +H ++A ++F +K+ L + Y+ +++ + G+VEK + +E
Sbjct: 525 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 584
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K + P+IF YN + + +I + +K D M + G D V Y +++ Y +
Sbjct: 585 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP-EKGLEPDSVTYSTMIDGYCKSE 643
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
++ A S E Q Y+ L+ G+ +K +++ + + K T+ ++
Sbjct: 644 NVAEA-FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSF 701
Query: 205 ICILSSYLMLGHLKEVGEIIDQ 226
++ Y ++E ++ +
Sbjct: 702 NTLIDGYCKSCKIQEASQLFQE 723
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y A+++ K A +L E++ S L N ++Y+ ++ Y S G++E+ +++ +
Sbjct: 351 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 410
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V PDIF YN IS + +++ +L E+ G D V + + Y
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ-GRGLKPDAVTFGAFILGYSKTGK 469
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + + + Y LI + GN + I++ L +
Sbjct: 470 MTEAAKYFDEMLDHGLMPNNPL-YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCS 528
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+ L G ++E ++ + K+ D+ + L+ F G EKA E H +
Sbjct: 529 AFIHGLLKNGRVQEALKVFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKAFELHDEMCL 587
Query: 266 KNCAP 270
K AP
Sbjct: 588 KGIAP 592
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 103/249 (41%), Gaps = 7/249 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S T+ L+ Y +A EL + +++ NL +A+ Y M+ + ++E
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ + P++ Y+ I A+ I++ ++ LD MSC SG + D Y +++ A
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC-SGVAPDIFCYNAIISCLSKA 432
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A S+ L+E + + +T+ I+ Y+ G + + + M + N
Sbjct: 433 GKMEEA-STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD--EMLDHGLMPNN 489
Query: 204 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y +++ + G+L E I D+ C+ + G ++A +
Sbjct: 490 PLYTVLINGHFKAGNLMEALSIFRHLHALGVLP-DVQTCSAFIHGLLKNGRVQEALKVFS 548
Query: 262 LLLQKNCAP 270
L +K P
Sbjct: 549 ELKEKGLVP 557
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + A E+A LF+ +++ NL + + Y +M Y +GQ +V + E++
Sbjct: 735 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 794
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K V PD TY L I + N+ + K DE+
Sbjct: 795 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 829
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 31 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---------- 80
++LY T++A LFE+++ +++ + +N M++ Y + K L
Sbjct: 323 MYLYLRKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378
Query: 81 -VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
+ ++KR + PD+FT++ +S C+A + ++Q ++ + + SG D V LVN+
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSGFLSDVVVNSALVNM 437
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
Y + +A + L + R ++T+ +I Y+ G + Q+++ +R+ +
Sbjct: 438 YNKCGCIQDANKAFL-----EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++ +LS+ G ++E D K+ + + ++ F +G E A F
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ + + + A LF+ +K++ L +Y ++ +Y + +VE +VEE+
Sbjct: 232 TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM 291
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K K P +FTY I +D M D G D V NL+NI A
Sbjct: 292 KGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNLINILGRAGR 350
Query: 146 LVNA 149
L +A
Sbjct: 351 LEDA 354
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P S +E ++ +L + AK KA +F ++K + A +YN ++ + M G EK
Sbjct: 154 PCSVGPAE-WSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEK 212
Query: 78 VALVVEEI-KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
+ + EI N PD TY+ IS+ D + DEM ++G Y +
Sbjct: 213 IHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMK-ENGLHPTEKIYTTI 271
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ +Y + V A + E + TY LI GLG ++D +
Sbjct: 272 LAMYFKLNK-VEAALRLVEEMKGKGCAPTVFTYTELI---KGLGKVGRVDDAY 320
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P Y +L+ AK E A ELF+ +K++ +A +Y M+ + + G+
Sbjct: 435 KGFP---PCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGR 491
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ + E+K+ PD++TYN +S ID+ + M ++G + D +K
Sbjct: 492 LSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMR-ENGCTPD-IKSH 549
Query: 135 NLV 137
N++
Sbjct: 550 NII 552
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 98/246 (39%), Gaps = 4/246 (1%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM-TLYMSVGQVEKVALVVEEIKRK 88
L+++ A E A +LF ++ + N + YN ++ ++ S + AL E++K
Sbjct: 341 LINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
+ P FTY + I T +++ L+EM + G Y +L++ A
Sbjct: 401 GIAPSSFTYAILIDGFCKTNRVEKALLLLEEMD-EKGFPPCPAAYCSLIDSLGRAKRY-E 458
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
A + E +++ + Y +I + G ++ ++ Y ++
Sbjct: 459 AANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALM 518
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
S + G + E ++ +++ + DI + N +L + G ++A E + +
Sbjct: 519 SGMIRAGMIDEAHSLMRNMRENGCTP-DIKSHNIILNGLAKTGGPKRAIEMFTKMKESEI 577
Query: 269 APTNAS 274
P S
Sbjct: 578 MPDAVS 583
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 84/210 (40%), Gaps = 3/210 (1%)
Query: 47 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 106
FE++K + ++ ++ Y ++ + +VEK L++EE+ K P Y I S
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 107 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 166
+ + E+ + G S V Y ++ + L +A E +K
Sbjct: 454 AKRYEAANELFQELKENCGRSSARV-YAVMIKHFGNCGRLSDA-VDLFCEMKKLGCSPDV 511
Query: 167 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
TY+ L+ G D+ + +++R +++ IL+ G K E+ +
Sbjct: 512 YTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTK 571
Query: 227 WKQSATSDFDISACNRLLGAFSDVGLTEKA 256
K+S D + N +L S G+ E A
Sbjct: 572 MKESEIMP-DAVSYNTILSCLSRAGMFEMA 600
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 105/246 (42%), Gaps = 7/246 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ + L Y + + A+++ +++ N + YN ++ G VE+ ++++
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+VPD FTY I+ + ++ K LDEMSC + + V Y NL++ ++
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREG-- 341
Query: 147 VNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
NA+ + + E + Q ITYD L+ +G D+ + K + + + Y
Sbjct: 342 -NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
I+ + K+ ++ + + + S ++ + ++ G EKA++ +
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISP-NVYTYSIMIHGLCQSGEPEKASDLLEEMT 459
Query: 265 QKNCAP 270
K P
Sbjct: 460 TKGLKP 465
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++H + EKA +L E + L NA +Y +++ Y G V + +++
Sbjct: 434 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 493
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ NV+PD++ YN I + +++ K+ +M + G + Y L++ Y+
Sbjct: 494 TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ-ERGLLPNEFTYSGLIHGYLKNGD 552
Query: 146 LVNAE 150
L +AE
Sbjct: 553 LESAE 557
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 35/131 (26%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA------ 79
TY+ L+H Y E AE+L +R+ + L N ++Y +++ Y +EKV+
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598
Query: 80 -----------------------------LVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
V+ I++ VPD+ Y+ IS T +
Sbjct: 599 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 658
Query: 111 DQVKKFLDEMS 121
++ LDEMS
Sbjct: 659 EKAFGILDEMS 669
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ KAE L ER+K+++++ +N +M + GQ++K +E++
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKL 308
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + P + TYN+ IS + N V + + EM D G S V Y L+N ++ +
Sbjct: 309 KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME-DRGISPSKVTYTILMNTFVRSDD 367
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ A + + Q TY LI GN + +++KS+
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQH-TYGVLIHGLCIKGNMVEASKLYKSM 413
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ Y A ++F+ + + ++ NA+ YN ++ GQV K ++E +
Sbjct: 214 TYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++ P T+N+ + T +D+ +L+++ G V Y NI I+
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKL-IGLCPTLVTY----NILISGFS 328
Query: 146 LVNAES--STLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
V S S LV E E +TY L+ + D I++ ++ + K+
Sbjct: 329 KVGNSSVVSELVREMEDRGISPSKVTYTILMNTFV---RSDDIEKAYEMFHLMKR 380
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/210 (17%), Positives = 90/210 (42%), Gaps = 12/210 (5%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT +++ + + + EL++++K + N YN ++T Y G++ V +EI
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
++ V + TYN+ I + + + L+ M + + N++ + +
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK--RAHINPTTRTFNMLMDGLCNTGQ 297
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
++ S L + + +TY+ LI ++ +GN + ++ + + + Y
Sbjct: 298 LDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTI 357
Query: 207 ILSSYL----------MLGHLKEVGEIIDQ 226
++++++ M +K +G + DQ
Sbjct: 358 LMNTFVRSDDIEKAYEMFHLMKRIGLVPDQ 387
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 8/239 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT L+ ++A+ +F R+ L+ N +Y M+ + G + + +++K
Sbjct: 145 YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMK 204
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
V+P+++TYN I+ + K DE+S G + + V Y L+ +
Sbjct: 205 LVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-KRGVACNAVTYNILIGGLCRKGQV 263
Query: 147 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
AE + A + T R T++ L+ G DK + L++ T Y
Sbjct: 264 SKAEGLLERMKRAHINPTTR---TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHML 262
++S + +G+ V E++ + + S ++ L+ F EKA E FH++
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTY-TILMNTFVRSDDIEKAYEMFHLM 378
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++Y ++L GA T +A E+ ++ + + + +MYN + + + Q+ + + E+
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+K+ PDIFTYN+ I+S +D+ +E+ S D + Y +L+N
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE-RSDCKPDIISYNSLIN 520
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y + K +LFE++K+ S + YN ++ + VG+V++ + EE++
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R + PDI +YN I+ ++D+ EM + G + D V Y L+ + +
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ-EKGLNPDVVTYSTLMECF-GKTER 562
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLI 173
V S E Q +TY+ L+
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 103/240 (42%), Gaps = 11/240 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY LL Y ++ KA +++ +++ + YN ++ ++ + EK V E
Sbjct: 203 SFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFE 259
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++K+++ D +TY + I + D+ +EM + G + + V Y L+ + +
Sbjct: 260 DMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE-GLTLNVVGYNTLMQV-LAK 317
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+V+ ++ + TY L+ L G ++D + + ++K+ MT
Sbjct: 318 GKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGV---VEISKRYMTQGI 374
Query: 204 YICILSSYLMLGHLKEVGEII-DQWKQSATSDFD--ISACNRLLGAFSDVGLTEKANEFH 260
Y ++ + LGH+ E + D W + D +S L GA + E ++ H
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
EGL L+ Y L+ + A K +KA ++F R+ ++ N Y+ ++ L ++ GQ
Sbjct: 299 EGLTLNVVG---YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK-FLDEMSCDSGGSDDWVKY 133
+ ++ VV EI ++ + I++Y + + + ++ + + F D S G D Y
Sbjct: 356 LVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SY 410
Query: 134 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSL 192
++++ A + A +E I ++ +T + +++ LG +I I
Sbjct: 411 MSMLESLCGAGKTIEA-----IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 193 RMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAF 247
K+ S + Y +++S+ G + EV E I+ +++ SD DI + N L+
Sbjct: 466 EKMKKDGPSPDIFTYNILIASF---GRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 248 SDVGLTEKAN 257
G ++A+
Sbjct: 523 GKNGDVDEAH 532
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + ++A +FE +++S+ + + YN ++ G V++ + +E+
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ K + PD+ TY+ + T ++ +EM
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 182 KDKIDQIWKSL 192
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 199
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 182 KDKIDQIWKSL 192
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 199
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 31 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---------- 80
++LY T++A LFE+++ +++ + +N M++ Y + K L
Sbjct: 323 MYLYLRKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQAL 378
Query: 81 -VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
+ ++KR + PD+FT++ +S C+A + ++Q ++ + + SG D V LVN+
Sbjct: 379 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSGFLSDVVVNSALVNM 437
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
Y + +A + L + R ++T+ +I Y+ G + Q+++ +R+ +
Sbjct: 438 YNKCGCIQDANKAFL-----EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 492
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++ +LS+ G ++E D K+ + + ++ F +G E A F
Sbjct: 493 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552
>gi|356574710|ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 821
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 111/254 (43%), Gaps = 39/254 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+L+H+ A A A+ ++++++ L + + Y +++ + +GQ+E + E+
Sbjct: 526 SYTSLIHILASADQPHIAKPYLKKMQEAGLVSDCIPYCAVISSFAKLGQLEMTEDIYREM 585
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R V PD+ + + I+ + + + ++DEM +G + V Y +L+ +Y +
Sbjct: 586 IRHGVQPDVIVHGILINVFSDAGRVKEAIGYVDEMK-KAGLPGNTVIYNSLIKLYAKIDN 644
Query: 146 LVNAESS--------------------------TLVEAEKSITQR-------QWITYDFL 172
L A+ + ++V+ K I + T+ +
Sbjct: 645 LEKAKEAYKLLQLSDEGPGVYSSNCMIDLYVKRSMVDQAKEIFETLKKNGAANEFTFAMM 704
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
+ LY + D+ QI K +R +T +Y +L Y + G KE I+ +K+
Sbjct: 705 LCLYKKIERFDEAIQIAKQIRKLG-PLTDLSYNNVLDLYAIAGRPKEA---IETFKEMVR 760
Query: 233 SDFDISACN-RLLG 245
+ ++ C+ R LG
Sbjct: 761 ASIQVNDCSLRSLG 774
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
+ EL ERV +N SF + YN ++ Y GQ+++ + E+ ++ V P T+N I+
Sbjct: 265 SPELDERVACANASFGSHTYNTLIDTYGKAGQLKEASQTFVEMLKQGVAPTTVTFNTMIN 324
Query: 103 SCAATLNIDQVK---KFLDEMSC 122
C +++V + ++E+ C
Sbjct: 325 ICGNHGRLEEVSLLVRKMEELRC 347
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ KAE L ER+K+++++ +N +M + GQ++K +E++
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKL 308
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + P + TYN+ IS + N V + + EM D G S V Y L+N ++ +
Sbjct: 309 KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME-DRGISPSKVTYTILMNTFVRSDD 367
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ A + + Q TY LI GN + +++KS+
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQH-TYGVLIHGLCIKGNMVEASKLYKSM 413
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ Y A ++F+ + + ++ NA+ YN ++ GQV K ++E +
Sbjct: 214 TYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++ P T+N+ + T +D+ +L+++ G V Y NI I+
Sbjct: 274 KRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKL-IGLCPTLVTY----NILISGFS 328
Query: 146 LVNAES--STLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
V S S LV E E +TY L+ + D I++ ++ + K+
Sbjct: 329 KVGNSSVVSELVREMEDRGISPSKVTYTILMNTFV---RSDDIEKAYEMFHLMKR 380
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 8/239 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT L+ ++A+ +F R+ L+ N +Y M+ + G + + +++K
Sbjct: 145 YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMK 204
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
V+P+++TYN I+ + K DE+S G + + V Y L+ +
Sbjct: 205 LVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-KRGVACNAVTYNILIGGLCRKGQV 263
Query: 147 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
AE + A + T R T++ L+ G DK + L++ T Y
Sbjct: 264 SKAEGLLERMKRAHINPTTR---TFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FHML 262
++S + +G+ V E++ + + S ++ L+ F EKA E FH++
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTY-TILMNTFVRSDDIEKAYEMFHLM 378
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/210 (17%), Positives = 90/210 (42%), Gaps = 12/210 (5%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT +++ + + + EL++++K + N YN ++T Y G++ V +EI
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
++ V + TYN+ I + + + L+ M + + N++ + +
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK--RAHINPTTRTFNMLMDGLCNTGQ 297
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
++ S L + + +TY+ LI ++ +GN + ++ + + + Y
Sbjct: 298 LDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTI 357
Query: 207 ILSSYL----------MLGHLKEVGEIIDQ 226
++++++ M +K +G + DQ
Sbjct: 358 LMNTFVRSDDIEKAYEMFHLMKRIGLVPDQ 387
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ + + + A LF+ +K++ L +Y ++ +Y + +VE +VEE+
Sbjct: 232 TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM 291
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K K P +FTY I +D M D G D V NL+NI A
Sbjct: 292 KGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNLINILGRAGR 350
Query: 146 LVNA 149
L +A
Sbjct: 351 LEDA 354
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P S +E ++ +L + AK KA +F ++K + A +YN ++ + M G EK
Sbjct: 154 PCSVGPAE-WSEILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEK 212
Query: 78 VALVVEEI-KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
+ + EI N PD TY+ IS+ D + DEM ++G Y +
Sbjct: 213 IHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMK-ENGLHPTEKIYTTI 271
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
+ +Y + V A + E + TY LI GLG ++D +
Sbjct: 272 LAMYFKLNK-VEAALRLVEEMKGKGCAPTVFTYTELI---KGLGKVGRVDDAY 320
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P Y +L+ AK E A ELF+ +K++ +A +Y M+ + + G+
Sbjct: 435 KGFP---PCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGR 491
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ + E ++ PD++TYN +S ID+ + M ++G + D +K
Sbjct: 492 LSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMR-ENGCTPD-IKSH 549
Query: 135 NLV 137
N++
Sbjct: 550 NII 552
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 3/210 (1%)
Query: 47 FERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAA 106
FE++K + ++ ++ Y ++ + +VEK L++EE+ K P Y I S
Sbjct: 394 FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGR 453
Query: 107 TLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 166
+ + E+ + G S V Y ++ + L +A E EK
Sbjct: 454 AKRYEAANELFQELKENCGRSSARV-YAVMIKHFGNCGRLSDA-VDLFCEXEKLGCSPDV 511
Query: 167 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
TY+ L+ G D+ + +++R +++ IL+ G K E+ +
Sbjct: 512 YTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTK 571
Query: 227 WKQSATSDFDISACNRLLGAFSDVGLTEKA 256
K+S D + N +L S G+ E A
Sbjct: 572 MKESEIMP-DAVSYNTILSCLSRAGMFEMA 600
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 6/247 (2%)
Query: 30 LLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM-TLYMSVGQVEKVALVVEEIKRK 88
L+++ A E A +LF ++ + N + YN ++ ++ S + AL E++K
Sbjct: 341 LINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKAN 400
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
+ P FTY + I T +++ L+EM + G Y +L++ A
Sbjct: 401 GIAPSSFTYAILIDGFCKTNRVEKALLLLEEMD-EKGFPPCPAAYCSLIDSLGRAKRY-E 458
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICI 207
A + E +++ + Y +I + G D +D + ++ Y +
Sbjct: 459 AANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSP-DVYTYNAL 517
Query: 208 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 267
+S + G + E ++ +++ + DI + N +L + G ++A E + +
Sbjct: 518 MSGMIRAGMIDEAHSLMRNMRENGCTP-DIKSHNIILNGLAKTGGPKRAIEMFTKMKESE 576
Query: 268 CAPTNAS 274
P S
Sbjct: 577 IMPDAVS 583
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 182 KDKIDQIWKSL 192
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 199
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 182 KDKIDQIWKSL 192
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 199
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 8/221 (3%)
Query: 38 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 97
KW EKAE+LF V + NA +N +M G+V + +++ + R +V PD+ +Y
Sbjct: 427 KW-EKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISY 485
Query: 98 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
N + T ID+ K LD M G D Y L++ Y A + +A S
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVM-VSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
K +T +TY+ ++ +G + +++ ++ ++K Y IL+ L
Sbjct: 545 MKGLTP-GVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNG---LCRN 600
Query: 218 KEVGEIIDQWKQSATSD--FDISACNRLLGAFSDVGLTEKA 256
V E ++ + D DI N ++GA G E A
Sbjct: 601 NFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDA 641
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 32/235 (13%)
Query: 24 SETYTALLHLY-AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ TYT L+H Y + KW E ++ + + L + ++Y ++ G+ + +
Sbjct: 237 NHTYTCLIHGYLSTGKWKEVV-QMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIF 295
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ + RK + P + Y + + A + ++ FLD M +G S D + + N Y
Sbjct: 296 DSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLM-VRNGVSPDHHIFNIMFNAY-- 352
Query: 143 ASHLVNAESSTLVEAEKSI--TQRQWIT-----YDFLIILYAGLGNKDKIDQIWKSLRMT 195
A+ + + EA ++QW++ Y LI LG D D + K +M
Sbjct: 353 ------AKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVD--DAVLKFNQMI 404
Query: 196 KQKMTSRNYICILSSYLMLGHL---------KEVGEIIDQWKQSATSDFDISACN 241
+ +T ++ S L+ G K E++DQ + + F+I CN
Sbjct: 405 NEGVTPDIFV---FSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCN 456
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 4/249 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TYT L+ A E+A +L++ + L+ + + N +M + VG++E++
Sbjct: 300 SPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTN 359
Query: 81 VVEEIKRKNVVPDIFTYNLWISSC-AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
V E+ P + +YN I + + + +V + D+M D G S Y L++
Sbjct: 360 VFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKAD-GVSPSEFTYSILIDG 418
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
Y + + A L E ++ Y LI + ++++K L+ +
Sbjct: 419 YCKTNRVEKA-LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+SR Y ++ + G L E ++ ++ K + D+ A N L+ G+ +AN
Sbjct: 478 SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP-DVYAYNALMSGMVKAGMVNEANSL 536
Query: 260 HMLLLQKNC 268
+ + C
Sbjct: 537 LRKMEENGC 545
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ Y + A LF+ +K + + +Y ++ +Y VG+VEK + EE+
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
KR P ++TY I +++ M D G + D V NL+NI
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTD-GLTPDVVFLNNLMNI 347
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P Y +L++ AK E A ELF+ +K++ + ++ +Y M+ + G+
Sbjct: 438 KGFP---PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ + + E+K + PD++ YN +S +++ L +M ++G + D +
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKME-ENGCTAD----I 549
Query: 135 NLVNIYIT--ASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
N NI + A V + + E K + +TY+ L+ +A G ++ ++ +
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMRE 609
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKE 219
++ + + Y IL + + H K+
Sbjct: 610 MKDKGFEYDAITYSSILDAVGNMDHEKD 637
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI-K 86
+ L+ AK KA +F + K + YN ++ + M GQ EKV V E+
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ PD TY+ ISS D + DEM + + + Y L+ IY +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-YTTLLGIYFKVGKV 284
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
A E +++ TY LI GLG ++++ +
Sbjct: 285 EKA-LDLFEEMKRAGCSPTVYTYTELI---KGLGKAGRVEEAY 323
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 9/233 (3%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+AE+L +++ + + ++Y +++ + +G V + +E++RK +VPDI TY I
Sbjct: 330 EAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVI 389
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+ + + ++ +EM G D V Y L++ Y A + A S +K +
Sbjct: 390 HGICKSGKMVEAREMFNEMLV-KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGL 448
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLK 218
T +TY L GL +ID + L +K N Y I++ +G+++
Sbjct: 449 TPNV-VTYT---ALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIE 504
Query: 219 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
+ +++++ + D L+ A+ +G KA+E ++L K PT
Sbjct: 505 QTVKLMEEMDLAGFYP-DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+ Y A ++A + ++ Q L+ N + Y + G+++ ++ E+
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
RK + P+++TYN ++ NI+Q K ++EM +G D + Y L++ Y
Sbjct: 479 SRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDL-AGFYPDTITYTTLMDAYCKMGE 537
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
+ A + K + Q +T++ L+
Sbjct: 538 MAKAHELLRIMLNKRL-QPTLVTFNVLM 564
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 110/266 (41%), Gaps = 26/266 (9%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++H + +A E+F + L + + Y ++ Y G++++ V ++
Sbjct: 384 TYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQM 443
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+K + P++ TY ID + L EMS G + Y +VN
Sbjct: 444 VQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS-RKGLQPNVYTYNTIVN---GLCK 499
Query: 146 LVNAESSTLVEAEKSIT--QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ N E + + E + ITY L+ Y +G K ++ + + + + T
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559
Query: 204 YICILSSYLMLGHLKEVGEIIDQW-----------------KQSATSDFDISACNRLLGA 246
+ +++ + M G L++ GE + +W KQ + ++ A + A
Sbjct: 560 FNVLMNGFCMSGMLED-GERLIEWMLEKGIMPNATTFNSLMKQYCIKN-NMRATTEIYKA 617
Query: 247 FSDVGLTEKANEFHMLLLQKNCAPTN 272
D G+ +N ++ +L++ +C N
Sbjct: 618 MHDRGVMPDSNTYN-ILIKGHCKARN 642
>gi|356551964|ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 551
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 107/237 (45%), Gaps = 9/237 (3%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
+K I + + F+G+ S + T+ AL+ YA EK EL +++++ N
Sbjct: 315 SKCQDIVAAQMAFDGV--SERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYT 372
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N ++ Y+ Q + + E++ N+ PDI+T + +++C+ I + K+ + S
Sbjct: 373 WNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQ-VHAYS 431
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+G D LV++Y + I+ ++++ ++ YA G+
Sbjct: 432 IRAGHDSDVHIGAALVDMYAKC-----GDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGH 486
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS 238
++ +++ + +K + ++ +LSS + G L E+G S+T ++S
Sbjct: 487 GEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSL-EIGHECLALMASSTKHMNLS 542
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
S K++ +Y A++ Y KA+ELF+R++Q + + + +N M++ Y+ ++
Sbjct: 194 FSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEA 253
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+ ++ ++ + PD FT ++ CA +I + K+ ++ G + + LV
Sbjct: 254 YSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKE-AHSLAIVRGLQSNSIVGGALVE 312
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+Y +V A+ A +++R T++ LI YA +KI ++ + +R
Sbjct: 313 MYSKCQDIVAAQM-----AFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMR 362
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + +K F ++++ N + YN ++ Y +G++++ +++ +
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + P++ +YN+ I+ ++ + + L+EM G + D V Y L+N Y
Sbjct: 72 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY-KGFTPDEVTYNTLLNGYCKEG- 129
Query: 146 LVNAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
N + ++ AE ++ +TY LI N ++ + + +R+ + R
Sbjct: 130 --NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y ++ + G L E I+++ +S S
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFS 217
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
M K ++ +F+ + + TYT L+ ++ +A + + +S S +
Sbjct: 160 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 219
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ YN + + + ++E+ VV+E+ K + PD+ +Y+ IS +D+ +
Sbjct: 220 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 279
Query: 119 EMSCDSGGSDDWVKYVNLV 137
EM + G S D V Y +L+
Sbjct: 280 EM-VEKGVSPDAVTYSSLI 297
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL++ A+ +A E F++++ L N Y ++ + G + + ++ E+
Sbjct: 152 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 211
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P + TYN +I +++ + EM + G + D V Y +++ +
Sbjct: 212 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM-VEKGLAPDVVSYSTIISGFCRKGE 270
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
L A EK ++ +TY LI
Sbjct: 271 LDRAFQMKQEMVEKGVSP-DAVTYSSLI 297
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y +++ ++A E+ E + + + + YN ++ Y G + ++ E+
Sbjct: 82 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 141
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R V P + TY I+S N+++ +F D+M G + Y L++ + +
Sbjct: 142 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI-RGLRPNERTYTTLIDGF-SRQG 199
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
L+N L E +S +TY+ I
Sbjct: 200 LLNEAYRILNEMTESGFSPSVVTYNAFI 227
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 199 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 258
Query: 95 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 151
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 259 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 316
Query: 152 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 211
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 317 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 373
Query: 212 LMLGHLKEVGEIIDQWKQSATSD 234
+ ++ G ++D ++ D
Sbjct: 374 TLAPNVVTYGALVDGLCKAHKVD 396
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 23/263 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + A E+A+ LFE ++ S + Y ++ Y+ QV + + +
Sbjct: 260 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 319
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SCDSGGSDDW------------- 130
P+ TY + NI + + ++ + DS SD +
Sbjct: 320 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 379
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V Y LV+ + +H V+ L S + I YD LI + G D +++
Sbjct: 380 VTYGALVD-GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF- 437
Query: 191 SLRMTKQKM--TSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAF 247
L+MTK + Y ++ G L +++ Q K S T ++ ++
Sbjct: 438 -LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGL 494
Query: 248 SDVGLTEKANEFHMLLLQKNCAP 270
+G +EKA + L+ +K C+P
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSP 517
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TYTAL+H Y AK +A ++F R+ + N + Y ++ G + K
Sbjct: 290 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 349
Query: 81 VVEEI----------------KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
V ++ R + P++ TY + +D + LD M S
Sbjct: 350 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML-SS 408
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAE 150
G + + Y L++ + A + +A+
Sbjct: 409 GCEPNHIVYDALIDGFCKAGKIDSAQ 434
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY+ ++ A EKA LF+ +K ++ + Y ++ + G +E+ + E
Sbjct: 223 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 282
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ P + TY I + + Q M D+G + V Y LV+ A
Sbjct: 283 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKA 341
Query: 144 SHLVNA 149
++ A
Sbjct: 342 GNISKA 347
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTA++ +EKA +L +++ S N + Y ++ G+++ + ++
Sbjct: 486 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 545
Query: 86 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
RK P+ TY + I+ CAA L +D+ + L EM W KY+
Sbjct: 546 SRKGCSPNYVTYRVLINHLCAAGL-LDKARLLLGEMK-----QTYWPKYLQ 590
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AE+++ + +N N + VG+ +K +++E+ RK VPD TY+ I+
Sbjct: 172 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 231
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 161
+++ EM G + D Y L++ + A + A+ L E +S+
Sbjct: 232 FLCHATKVEKAFLLFQEMK-MVGVTPDVYTYTILIDSFCKAGLIEQAQ--WLFEEMRSVG 288
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
+TY LI Y + + I+ + + Y ++ G++ +
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348
Query: 222 EIIDQW---KQSATSDFDISACNR--------LLGAFSDVGLTE--KANEFHMLL---LQ 265
E+ + SA SDF +R GA D GL + K + H LL L
Sbjct: 349 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHKVDHAHELLDAMLS 407
Query: 266 KNCAPTN 272
C P +
Sbjct: 408 SGCEPNH 414
>gi|297851236|ref|XP_002893499.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
gi|297339341|gb|EFH69758.1| hypothetical protein ARALYDRAFT_335936 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 4 VFGIHSGERYFEGLPLSAKT-SETYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALM 61
V G+ E++FE +P + S+ YT +L Y AK EKAE +F ++++
Sbjct: 19 VLGLEEAEKFFETIPQDKRDDSDLYTTILSFYTRSAKTLEKAELIFHKMRKLGYLSKPCP 78
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N MM+LY +G+ + V ++ ++++ N D T N+ + A +
Sbjct: 79 FNHMMSLYNQIGKRDMVHQILSQMEKNNAKSDNRTLNIILGLLAES-------------- 124
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYD 170
+ DW + Y+ +V A L AE+S+ YD
Sbjct: 125 --HSSTLDWRMSCEMAKTYLKQGLVVEA-IKMLRRAEESVVDPDSKKYD 170
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 110/240 (45%), Gaps = 21/240 (8%)
Query: 31 LHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL---------- 80
++LY T++A LFE+++ +++ + +N M++ Y + K L
Sbjct: 283 MYLYLRKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKDDLQARSRGFQAL 338
Query: 81 -VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
+ ++KR + PD+FT++ +S C+A + ++Q ++ + + SG D V LVN+
Sbjct: 339 TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ-IHAQTIKSGFLSDVVVNSALVNM 397
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
Y + +A + L + R ++T+ +I Y+ G + Q+++ +R+ +
Sbjct: 398 YNKCGCIQDANKAFL-----EMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP 452
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++ +LS+ G ++E D K+ + + ++ F +G E A F
Sbjct: 453 NEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 512
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
G+P +A TY+ +LH + ++A +LF+ + N+ N L ++ ++ G
Sbjct: 402 RGIPPNA---VTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGM 458
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
V + V E + K V P+I+TYN ++ +++ +K E+ G + D Y
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF-EIMVGKGCAPDLHSYN 517
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L+N Y + + A++ + K +T +TY+ ++ +G +++K +
Sbjct: 518 ILINGYCNSRRMDKAKALLTQMSVKKLTPNT-VTYNTIMKGLCYVGRLLDAQELFKKMCS 576
Query: 195 TKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 229
+ T Y +L+ GHL E ++ K+
Sbjct: 577 SGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKE 611
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L++ + A EL+ + +S + + YN ++ + G V +++
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ P++ TYN I S ++ FL EM G D + Y ++V+
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEM-VGRGIPPDAITYNSIVHGLCCLGQ 283
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQKMTSR-- 202
L N + E++ + +TY+ +I LY D D + + M Q +
Sbjct: 284 L-NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE---MVDQGIPPDVV 339
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y IL LG L E + + +Q D+ A N ++ + L A EF
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKP-DVVAYNTIIDSLCKDRLVNDAMEFLSE 398
Query: 263 LLQKNCAP 270
++ + P
Sbjct: 399 MVDRGIPP 406
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/205 (16%), Positives = 80/205 (39%), Gaps = 2/205 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y ++ + A E + + NA+ Y+ ++ + ++GQ+++ + +E+
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+NV+P+ T+++ + + + + + M+ + G + Y L+N Y +
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT-EKGVEPNIYTYNALMNGYCLRCKM 494
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
A + K +Y+ LI Y DK + + + K + Y
Sbjct: 495 NEARKVFEIMVGKGCAP-DLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSA 231
I+ +G L + E+ + S
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSG 578
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + + +L +Y T+ A +F+ + + + N ++ + G+
Sbjct: 153 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 212
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V +++ R +VPD+F ++ +++ +D+ F+ +M + G + V Y +L+N Y
Sbjct: 213 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGY 271
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
++ + A+ +EK ++ R +TY LI G + K+D+ K LR +++
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLI---KGYCKQCKMDEAEKVLRGMQEEAA 327
Query: 201 ----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
R Y ++ Y G + + ++D+ + ++ CN L+ + G +A
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEA 386
Query: 257 NEFHMLLLQKNCAPTNAS 274
++ N P + S
Sbjct: 387 EGVITRMVDWNLKPDSYS 404
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
+ K + R+F L L + TY L+H Y+ A ++A L + + + L N
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ YN ++ V++ + ++ +K + P++ TYN I N+D K D
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843
Query: 119 EMSCDSGGSDDWVKYVNLVN 138
+M + G S V Y L+N
Sbjct: 844 KM-IEEGISPSVVTYSALIN 862
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ ++ ++A+ LF ++ Q L N + YN ++ Y +G ++ + +++
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ + P + TY+ I+ +I++ K L++M +G ++Y LV
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM-IKAGVDSKLIEYCTLV 896
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 2/231 (0%)
Query: 40 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 99
++A ++++ + N + Y+ ++ Y+S+G VE V++ + K V ++ TY L
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 100 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
I +D+ +K L M ++ D Y L++ Y + +A L E +
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA-VRLLDEMLR 360
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
+ + LI Y G + + + + K S +Y +L Y GH E
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 220 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ D+ Q + N LL VG + A + L+++ AP
Sbjct: 421 AFNLCDKMLQEGIEP-TVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAP 470
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 94/235 (40%), Gaps = 14/235 (5%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+AEE+F+++K S + + Y ++ Y V + V ++R+ + P I YN I
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLI 584
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
S + + + L EM G + + V Y L++ + L A SS E +
Sbjct: 585 SGLFKSRRLVEXTDLLTEMGI-RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHL 217
+ I + +GL +ID+ + QKM + C L S + +
Sbjct: 644 SANIIICS----TMVSGLYRLGRIDEA----NLLMQKMVDHGFFPDHECFLKSDIRYAAI 695
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+++ + +D+ ++ +I N + G + A F +L K P N
Sbjct: 696 QKIADSLDESCKTFLLPNNI-VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 2/190 (1%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
N ++YN + G+V+ + K VPD FTY I +A N+D+ +
Sbjct: 713 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 772
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
DEM G + V Y L+N + ++ A+ +K + +TY+ LI Y
Sbjct: 773 DEM-LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP-NVVTYNTLIDGYC 830
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
+GN D ++ + + Y +++ G ++ ++++Q ++ I
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890
Query: 238 SACNRLLGAF 247
C + G F
Sbjct: 891 EYCTLVQGGF 900
>gi|357120648|ref|XP_003562037.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Brachypodium distachyon]
Length = 807
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 26 TYTALLHLYAGAKWTEKAEELFER-------VKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
T + +L Y A EKAE F R K+ + +N YN ++ Y GQ+EKV
Sbjct: 213 TMSTVLQAYKKAGEYEKAELFFRRWSSESHKRKEGHRCYNLYTYNTLIDTYGKAGQLEKV 272
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 122
+ ++ R+ VVPDIFT+N I ++QV + ++E C
Sbjct: 273 SDAFSQMLREGVVPDIFTFNTLIHVWGKHHRMEQVSSLVRMMEEFQC 319
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 112/252 (44%), Gaps = 10/252 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+ L + AK EKA ++ + L + + Y+ +++ + + V + E+
Sbjct: 496 TYSSLIQLLSTAKLPEKALYYLRKMHAAELPIDCVPYSVIISSFAKKDNLHMVECLFREM 555
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ D + Y++ I + A N+ Q + ++ +G + Y +L+ +Y A +
Sbjct: 556 ATSGICADAYVYSILIDAYAEVGNVHQAAAYFGLVT-KAGLCESSTIYNSLIKLYTKAGY 614
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT--KQKMTSR 202
L AE+ + KS+ T + +I LY+ ++ +I++SL+ + + +
Sbjct: 615 L--AEAHETYKLLKSLDTDTNLYASNCMISLYSDHCMVNEAREIFESLKASGCANEFSHA 672
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
+C+ Y + E I + Q+ + + N ++ + G TE+A +
Sbjct: 673 MMVCL---YKKVARYDEAHRISKEM-QALGLLTQVLSYNSVIQMYISCGKTEEAVKIFQN 728
Query: 263 LLQKNCAPTNAS 274
+L + P +A+
Sbjct: 729 MLASSTPPNDAT 740
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
N M+ Y V ++++ V + ++R V+PD TY+ I + ++ +L +M
Sbjct: 463 NVMIKAYGLVEKLDEACEVADCMERYGVLPDYLTYSSLIQLLSTAKLPEKALYYLRKMHA 522
Query: 123 DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
+ D V Y +++ + +L E A I ++ Y LI YA +GN
Sbjct: 523 -AELPIDCVPYSVIISSFAKKDNLHMVECLFREMATSGICADAYV-YSILIDAYAEVGNV 580
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
+ + + +S Y ++ Y G+L E E K S +D ++ A N
Sbjct: 581 HQAAAYFGLVTKAGLCESSTIYNSLIKLYTKAGYLAEAHETYKLLK-SLDTDTNLYASNC 639
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCA 269
++ +SD + +A E L CA
Sbjct: 640 MISLYSDHCMVNEAREIFESLKASGCA 666
>gi|302808862|ref|XP_002986125.1| hypothetical protein SELMODRAFT_44042 [Selaginella moellendorffii]
gi|300146273|gb|EFJ12944.1| hypothetical protein SELMODRAFT_44042 [Selaginella moellendorffii]
Length = 317
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A++ YA ++AEELF R + N++ ++ M+ Y +G +E + +E + ++
Sbjct: 84 AMVTRYAQNGHMQRAEELFRRAPER----NSVTWSVMVHAYARLGHLEDATITLERMPQQ 139
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
++ +Y IS+ ++ +K DE+ G V + +V Y H+
Sbjct: 140 SIA----SYTSIISASVEKGFVESARKLFDELPQYDNGFHCVVLWNAMVTGYAQNGHMQC 195
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
AE E + +R +T+ ++ YA LG+ + D RM +Q + S Y I+
Sbjct: 196 AE-----ELFRRAPERNSVTWSVMVHAYARLGHLE--DATITLERMPQQSIAS--YTSII 246
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
S+ + G ++ + + + + D A ++ + GL EKA EF ++ +
Sbjct: 247 SASVEKGFVESARKFVF----NRLEERDAVAWTSIVLGHAQNGLAEKAVEFFSWMVMEGV 302
Query: 269 APTNAS 274
P + +
Sbjct: 303 EPVDVT 308
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 3/249 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ E+A E+ ++ + S N + YN +++ QVE+ + +
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++PD+ T+N I T N + +EM G D Y L++ +
Sbjct: 413 TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK-TKGCHPDEFTYNMLIDSLCSRGR 471
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A S L E E S R +TY+ LI + ++ ++I+ + + Y
Sbjct: 472 LEEA-LSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ ++E +++DQ D N LL F G +KA + +
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKP-DKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589
Query: 266 KNCAPTNAS 274
C P + +
Sbjct: 590 NGCEPDSVT 598
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + K E+AEE+F+ ++ +S N + YN ++ +VE+ A +++++
Sbjct: 493 TYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ + PD FTYN ++ +I + + M+ +G D V Y L+
Sbjct: 553 LMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT-SNGCEPDSVTYGTLI 603
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/250 (18%), Positives = 105/250 (42%), Gaps = 4/250 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
T+ L+ YA + ++A + + +++ L +A YN ++ + + +++ V +V
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSR 201
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + + PD+ T+N+ I + I ++EM G S D + L+ +I
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMG-SYGLSPDEKTFTTLMQGFIEEG 260
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
++ N + + +T + L+ Y G +++ + + +
Sbjct: 261 NM-NGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTF 319
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+++ +GH+K EI+D Q D DI N L+ +G E+A E ++
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEGF-DPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378
Query: 265 QKNCAPTNAS 274
++ +P +
Sbjct: 379 LRDFSPNTVT 388
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 7 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
I E F+ + L ++ TY L+ + E+A +L +++ L + YN
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
++T + G ++K A +V+ + PD TY I
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLI 603
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 5/189 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
+ KV + E + + +P S + Y LL KAE+LF ++K+ +
Sbjct: 214 VAKVHSLQKAENFLKDIPESFRGEVVYRTLLANCVLKHHVNKAEDLFNKMKELKFPTSVF 273
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+++ LY S+ +K++ V+ ++R+N+ P TY I+S +I ++K ++ M
Sbjct: 274 ACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRGTYQFLINSKGLAGDITGMEKIVETM 332
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
+ G D L YI A L + E E K + Q W+ L+ LYA +
Sbjct: 333 K-EEGIEVDPELQATLAKYYIRAG-LKERAQDLMKEIEGKGLQQTPWVCRS-LLPLYADI 389
Query: 180 GNKDKIDQI 188
G+ D + ++
Sbjct: 390 GDSDNVRRL 398
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++ L++ + E+A + FER+K + + + YN ++ +Y VG+V + + E++
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKL 239
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K N D TY + A + + + + EM DSG S + V +N + ++ +
Sbjct: 240 KSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMR-DSGSSPNAV-IMNTLMGTLSKAG 297
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN E S +T L+ +Y +G D+ +++++L+ K Y
Sbjct: 298 KVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYN 357
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + + G +++ +I+ + K++
Sbjct: 358 SLMKACVEGGRVEQAEDILKEMKRAG 383
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
++K ++ ++ F + S + T T + L+ +Y ++A E++E +K +
Sbjct: 293 LSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCD 352
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+YN +M + G+VE+ +++E+KR PD TY +++ A +D ++ D
Sbjct: 353 VAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFD 412
Query: 119 EMSCDSGGSD 128
++ +G D
Sbjct: 413 KVVALNGKPD 422
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 106/229 (46%), Gaps = 8/229 (3%)
Query: 38 KWTEKAEELFE--RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 95
+W EKA FE + + N YN M+ + + Q+E +VEE+ + + PD +
Sbjct: 121 RW-EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNY 179
Query: 96 TYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLV 155
T++ I+ ++ K+ + M + G D V Y +++++Y VN E+ L
Sbjct: 180 TFSTLINCAKRCRQPEEALKWFERMKSE-GIVPDEVTYNSVIDMYGRVGR-VN-EAVELY 236
Query: 156 EAEKSITQR-QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLML 214
E KS+ + +TY + +YA G+ I Q+ + +R + + ++ +
Sbjct: 237 EKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKA 296
Query: 215 GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
G + + ++ ++ + S S ++ + L+ ++ VG ++A E + L
Sbjct: 297 GKVNQAKKVFNEMRTSGVSPTPVT-LSILVEMYTRVGAYDQAFEVYETL 344
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +L+ E+AE++ + +K++ + + L Y M Y + G V+ + +++
Sbjct: 356 YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVV 415
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N PD + + I +C I+Q K DEM
Sbjct: 416 ALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEM 449
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 98/249 (39%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L + + E +E+L E + + + ++ ++ Q E+ E +
Sbjct: 145 TYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERM 204
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW----VKYVNLVNIYI 141
K + +VPD TYN I +++ + +++ S +W V Y + N+Y
Sbjct: 205 KSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLK-----SVNWKLDTVTYGAIANVYA 259
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
A + + E S + + + L+ + G ++ +++ +R + T
Sbjct: 260 RAGDY-QSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTP 318
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
++ Y +G + E+ + K D++ N L+ A + G E+A +
Sbjct: 319 VTLSILVEMYTRVGAYDQAFEVYETLKTEGWK-CDVAVYNSLMKACVEGGRVEQAEDILK 377
Query: 262 LLLQKNCAP 270
+ + C P
Sbjct: 378 EMKRAGCNP 386
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TYTAL++ L ++W++ A L + +K+ ++ N + Y+ ++ ++ G+V + + EE
Sbjct: 330 TYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEE 388
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ R ++ PDI TY+ I+ ID+ + D M G D V Y L+N + A
Sbjct: 389 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM-VSKGCLADVVSYNTLINGFCKAK 447
Query: 145 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ + ++ + ++QR +TY+ LI + G+ DK + + +
Sbjct: 448 RVEDG-----MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L++ + AK E +LF + Q L N + YN ++ + G V+K ++
Sbjct: 435 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Query: 86 KRKNVVPDIFTYNLWI 101
+ PDI+TYN+ +
Sbjct: 495 DFFGISPDIWTYNILL 510
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ A + A+E+F+ + + N + YN ++ G++EK +V E +
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD-WVKYVNLVNIYITAS 144
+R + P I+TYN+ I E C +G +D W + NL
Sbjct: 1107 QRSKMEPTIYTYNIMI-----------------EGMCKAGKVEDGWDLFCNL-------- 1141
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+L + + + Y+ +I + G+K++ D ++K ++ S Y
Sbjct: 1142 --------SLKGVKPDV-----VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 1188
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + L G + E+I + +
Sbjct: 1189 NTLIRARLRDGDREASAELIKEMRSCG 1215
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L++ + ++A+++FE + + + + YN ++ + +VE+ V E+
Sbjct: 977 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 1036
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ +V + TYN+ I + D ++ EM D G + + Y L++
Sbjct: 1037 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGK 1095
Query: 146 LVNAESSTLV--EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK-----SLRMTKQK 198
L E + +V ++S + TY+ +I G+ K++ W SL+ K
Sbjct: 1096 L---EKAMVVFEYLQRSKMEPTIYTYNIMI---EGMCKAGKVEDGWDLFCNLSLKGVKPD 1149
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
+ + N ++S + G +E + + K+ T
Sbjct: 1150 VVAYNT--MISGFCRKGSKEEADALFKEMKEDGT 1181
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 92/236 (38%), Gaps = 15/236 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y A++ K A + F+ +++ + N + Y ++ + + A ++ ++
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITA 143
+K + P++ TY+ + + + + K+ +E MS D D V Y +L+N
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP----DIVTYSSLINGLCLH 411
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A + K ++Y+ LI G +++ K R Q+ N
Sbjct: 412 DRIDEANQMFDLMVSKGCLA-DVVSYNTLI---NGFCKAKRVEDGMKLFREMSQRGLVSN 467
Query: 204 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y ++ + G + + E Q S DI N LLG D G EKA
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP-DIWTYNILLGGLCDNGELEKA 522
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ ++A A + + A +++R++++ LS + Y+ ++ G + + E+
Sbjct: 449 TYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEM 508
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
VP++ TYN+ I+ A N + K +M ++G D V Y ++ +
Sbjct: 509 VEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQ-NAGFQPDKVTYSIVMEALGHCGY 567
Query: 146 LVNAESSTLVEAEKSITQRQWIT----YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L AE S VE + Q+ W+ Y L+ L+ GN +K + +++ M +
Sbjct: 568 LEEAE-SVFVE----MQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQA--MLNAGLLP 620
Query: 202 RNYIC--ILSSYLMLGHLKEVGEII 224
C +LS++L L L + ++
Sbjct: 621 NVPTCNSLLSAFLRLHRLPDAYNLV 645
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 97/246 (39%), Gaps = 3/246 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TYT ++ + A+ + +L E++ + N + YN ++ Y +++ V E
Sbjct: 378 HTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNE 437
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ PD TY I A ID M ++G S D Y ++N A
Sbjct: 438 MQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQ-EAGLSPDTFTYSVIINCLGKAG 496
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+L A E + +TY+ +I L A N + +++ ++ + Y
Sbjct: 497 NLAAAH-WLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTY 555
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ + G+L+E + + +Q D L+ + G EKA+E++ +L
Sbjct: 556 SIVMEALGHCGYLEEAESVFVEMQQKNWVP-DEPVYGLLVDLWGKAGNVEKASEWYQAML 614
Query: 265 QKNCAP 270
P
Sbjct: 615 NAGLLP 620
>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
Length = 555
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 94/210 (44%), Gaps = 10/210 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+A++ LY A T +A +L++ ++++N + + + + +Y VG + + + ++
Sbjct: 101 TYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDM 160
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ + P++ +N I + + K DEM+ G + L+++Y
Sbjct: 161 EQAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMA-SYGLEPSEITLSILIDMYTKVGA 219
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L A ++ +I Q++W + Y+ L+ GN + + + + KQ
Sbjct: 220 LDKA-----LDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQRAESLIAEMEREKQWPDH 274
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
Y +++ Y G + EV + D+ K A
Sbjct: 275 MTYGILMNVYATKGMVAEVRAMFDKLKNLA 304
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 40 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 99
E A F R++++ +SF+ + Y+ M+ LY G+ + + + +++ N PD+ ++ +
Sbjct: 80 AEDAIAWFHRLRETGVSFDGVTYSAMIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGV 139
Query: 100 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
+ + + + + +M + + V + L+ A + A+ A
Sbjct: 140 IANVYSRVGDYQAILRLFRDME-QAEIKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMASY 198
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
+ + IT LI +Y +G DK ++ +++ K K+ Y +L S + G+++
Sbjct: 199 GLEPSE-ITLSILIDMYTKVGALDKALDVYDTIKQKKWKLDVLVYNTLLKSCVESGNIQR 257
Query: 220 VGEIIDQWKQ 229
+I + ++
Sbjct: 258 AESLIAEMER 267
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+L+++ ++A+ LF +++Q L + +++N ++ + + G +++ +++E+
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+PD TYN + +++ ++ LDEM G D + Y L++ Y
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMK-RRGIKPDHISYNTLISGY 541
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/201 (18%), Positives = 84/201 (41%), Gaps = 2/201 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ++++ +KA+E ++ + N + YN ++ + G+ ++ ++ + +
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K K + PD +TYN +IS +++ + +M + G + V Y L++ Y
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM-LEGGLVPNAVTYNALIDGYCNKGD 336
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A + K I +TY+ I G D + K +R + +
Sbjct: 337 LDKAYAYRDEMISKGIMA-SLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHN 395
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
+++ Y G K ++D+
Sbjct: 396 ILINGYCRCGDAKRAFGLLDE 416
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 51/102 (50%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
+ AKT+ + L+ Y K +A E F +K+ N N+M++L++ + + +
Sbjct: 141 VDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMA 200
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ E+ R N+ ++T+N+ I+ + + K+F+ M
Sbjct: 201 WVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM 242
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ Y E+A +L + +K+ + + + YN +++ Y G ++ V +E+
Sbjct: 498 TYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
P I TYN I + ++ L EM DD
Sbjct: 558 MTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDD 601
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY AL+ A E AE L ++ + N +++N M Y G++++ +
Sbjct: 357 AHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQA 416
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+++K + D+FTYN+ + D+ K L+ M + G + V + + IY
Sbjct: 417 IMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSM-VEKGVKPNVVTFTMFIEIYCKE 475
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+L AE + EK ITY+ LI Y K+K+ Q K K +M ++
Sbjct: 476 GNLAEAE-RLFRDMEKKGEVPNIITYNTLIDAYC---KKEKVKQAHK----IKSEMINKG 527
Query: 204 YICILSSYLMLGH 216
+ L +Y L H
Sbjct: 528 LLPDLYTYSSLIH 540
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL+ Y G K + +E+ + +++ + F+ Y+ ++ Y S G +E+ + EE+
Sbjct: 254 TYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEM 313
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+ KN+ D++ Y+ IS N+ + DEMS
Sbjct: 314 REKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMS 349
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ Y+ + E+AE++FE +++ N+ + +Y+ M++ +G +++ + +E+
Sbjct: 289 TYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEM 348
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
++++VP+ TY I ++ + L EM S G D
Sbjct: 349 SQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQ--SKGVD 389
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T + +Y +AE LF +++ N + YN ++ Y +V++ + E+
Sbjct: 464 TFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K ++PD++TY+ I +D+ K +EM
Sbjct: 524 INKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEM 558
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 3/232 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+A++ A+ LF +++ + + YN M+ + S G+ +++E+
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + PD+ TYN I++ + ++ DEM G + + Y ++++ + + L
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE + A K + IT++ LI Y G D ++ + T + Y
Sbjct: 377 DAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
++ + ++G L +++ + S DI C+ LL D G + A E
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCP-DIVTCDTLLDGLCDNGKLKDALE 486
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
YN +++ ++ G+ + + EE+ + +VPD TY+ I +D+ + D M
Sbjct: 514 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 573
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
S S + V + L+N Y A V+ E + ITY LI + +GN
Sbjct: 574 SKS-FSPNVVTFTTLINGYCKAGR-VDDGLELFCEMGRRGIVANAITYITLICGFRKVGN 631
Query: 182 KDKIDQIWKSL 192
+ I++ +
Sbjct: 632 INGALDIFQEM 642
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ + +AEEL++ + + N + Y+ M+ + +++ + +
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P++ T+N I ID + L EM+ ++G D Y L++ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGD 445
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKM 199
L NA L E S +T D L+ GL + K+ +++K ++ +K+ +
Sbjct: 446 L-NAALDLLQEMISSGLCPDIVTCDTLL---DGLCDNGKLKDALEMFKVMQKSKKDL 498
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + + +L +Y T+ A +F+ + + + N ++ + G+
Sbjct: 119 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 178
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V +++ R +VPD+F ++ +++ +D+ F+ +M + G + V Y +L+N Y
Sbjct: 179 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGY 237
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
++ + A+ +EK ++ R +TY LI G + K+D+ K LR +++
Sbjct: 238 VSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLI---KGYCKQCKMDEAEKVLRGMQEEAA 293
Query: 201 ----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
R Y ++ Y G + + ++D+ + ++ CN L+ + G +A
Sbjct: 294 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEA 352
Query: 257 NEFHMLLLQKNCAPTNAS 274
++ N P + S
Sbjct: 353 EGVITRMVDWNLKPDSYS 370
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
+ K + R+F L L + TY L+H Y+ A ++A L + + + L N
Sbjct: 690 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 749
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ YN ++ V++ + ++ +K + P++ TYN I N+D K D
Sbjct: 750 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 809
Query: 119 EM 120
+M
Sbjct: 810 KM 811
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 2/231 (0%)
Query: 40 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 99
++A ++++ + N + Y+ ++ Y+S+G VE V++ + K V ++ TY L
Sbjct: 208 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 267
Query: 100 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
I +D+ +K L M ++ D Y L++ Y + +A L E +
Sbjct: 268 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA-VRLLDEMLR 326
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
+ + LI Y G + + + + K S +Y +L Y GH E
Sbjct: 327 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 386
Query: 220 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ D+ Q + N LL VG + A + L++++ AP
Sbjct: 387 AFNLCDKMLQEGIEP-TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 436
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 14/235 (5%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+AEE+F+++K S + + Y ++ Y V + V ++R+ + P I YN I
Sbjct: 491 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 550
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
S + + +V L EM G + + V Y L++ + L A SS E +
Sbjct: 551 SGLFKSRRLVEVTDLLTEMGI-RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHL 217
+ I + +GL +ID+ + QKM + C L S + +
Sbjct: 610 SANIIICS----TMVSGLYRLGRIDEA----NLLMQKMVDHGFFPDHECFLKSDIRYAAI 661
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+++ + +D+ ++ +I N + G + A F +L K P N
Sbjct: 662 QKIADSLDESCKTFLLPNNI-VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
N ++YN + G+V+ + K VPD FTY I +A N+D+ +
Sbjct: 679 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 738
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
DEM G + V Y L+N + ++ A+ +K + +TY+ LI Y
Sbjct: 739 DEM-LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP-NVVTYNTLIDGYC 796
Query: 178 GLGNKD 183
+GN D
Sbjct: 797 KIGNMD 802
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 433 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 492
Query: 95 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 151
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 493 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 550
Query: 152 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 211
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 551 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 607
Query: 212 LMLGHLKEVGEIID 225
+ ++ G ++D
Sbjct: 608 TLAPNVVTYGALVD 621
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 23/263 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + A E+A+ LFE ++ S + Y ++ Y+ QV + + +
Sbjct: 494 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 553
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SCDSGGSDDW------------- 130
P+ TY + NI + + ++ + DS SD +
Sbjct: 554 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 613
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V Y LV+ + +H V+ L S + I YD LI + G D +++
Sbjct: 614 VTYGALVD-GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF- 671
Query: 191 SLRMTKQKM--TSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAF 247
L+MTK + Y ++ G L +++ Q K S T ++ ++
Sbjct: 672 -LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGL 728
Query: 248 SDVGLTEKANEFHMLLLQKNCAP 270
+G +EKA + L+ +K C+P
Sbjct: 729 CRIGESEKALKLLSLMEEKGCSP 751
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TYTAL+H Y AK +A ++F R+ + N + Y ++ G + K
Sbjct: 524 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 583
Query: 81 VVEEI----------------KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
V ++ R + P++ TY + +D + LD M S
Sbjct: 584 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML-SS 642
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAE 150
G + + Y L++ + A + +A+
Sbjct: 643 GCEPNHIVYDALIDGFCKAGKIDSAQ 668
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY+ ++ A EKA LF+ +K ++ + Y ++ + G +E+ + E
Sbjct: 457 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 516
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ P + TY I + + Q M D+G + V Y LV+ A
Sbjct: 517 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKA 575
Query: 144 SHLVNA 149
++ A
Sbjct: 576 GNISKA 581
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AE+++ + +N N + VG+ +K +++E+ RK VPD TY+ I+
Sbjct: 406 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 465
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 161
+++ EM G + D Y L++ + A + A+ L E +S+
Sbjct: 466 FLCHATKVEKAFLLFQEMKM-VGVTPDVYTYTILIDSFCKAGLIEQAQ--WLFEEMRSVG 522
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
+TY LI Y + + I+ + + Y ++ G++ +
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582
Query: 222 EIIDQW---KQSATSDFDISACNR--------LLGAFSDVGLTE--KANEFHMLL---LQ 265
E+ + SA SDF +R GA D GL + K + H LL L
Sbjct: 583 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHKVDHAHELLDAMLS 641
Query: 266 KNCAPTN 272
C P +
Sbjct: 642 SGCEPNH 648
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 95 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 151
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 324 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 152 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 211
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 382 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438
Query: 212 LMLGHLKEVGEIID 225
+ ++ G ++D
Sbjct: 439 TLAPNVVTYGALVD 452
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 23/263 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + A E+A+ LFE ++ S + Y ++ Y+ QV + + +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SCDSGGSDDW------------- 130
P+ TY + NI + + ++ + DS SD +
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V Y LV+ + +H V+ L S + I YD LI + G D +++
Sbjct: 445 VTYGALVD-GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF- 502
Query: 191 SLRMTKQKM--TSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAF 247
L+MTK + Y ++ G L +++ Q K S T ++ ++
Sbjct: 503 -LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGL 559
Query: 248 SDVGLTEKANEFHMLLLQKNCAP 270
+G +EKA + L+ +K C+P
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSP 582
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TYTAL+H Y AK +A ++F R+ + N + Y ++ G + K
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414
Query: 81 VVEEI----------------KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
V ++ R + P++ TY + +D + LD M S
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML-SS 473
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAE 150
G + + Y L++ + A + +A+
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQ 499
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY+ ++ A EKA LF+ +K ++ + Y ++ + G +E+ + E
Sbjct: 288 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 347
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ P + TY I + + Q M D+G + V Y LV+ A
Sbjct: 348 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKA 406
Query: 144 SHLVNA 149
++ A
Sbjct: 407 GNISKA 412
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTA++ +EKA +L +++ S N + Y ++ G+++ + ++
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610
Query: 86 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
RK P+ TY + I+ CAA L +D+ + L EM W KY+
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGL-LDKARLLLGEMK-----QTYWPKYLQ 655
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AE+++ + +N N + VG+ +K +++E+ RK VPD TY+ I+
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 161
+++ EM G + D Y L++ + A + A+ L E +S+
Sbjct: 297 FLCHATKVEKAFLLFQEMKM-VGVTPDVYTYTILIDSFCKAGLIEQAQ--WLFEEMRSVG 353
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
+TY LI Y + + I+ + + Y ++ G++ +
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413
Query: 222 EIIDQW---KQSATSDFDISACNR--------LLGAFSDVGLTE--KANEFHMLL---LQ 265
E+ + SA SDF +R GA D GL + K + H LL L
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHKVDHAHELLDAMLS 472
Query: 266 KNCAPTN 272
C P +
Sbjct: 473 SGCEPNH 479
>gi|308044519|ref|NP_001183314.1| uncharacterized protein LOC100501715 [Zea mays]
gi|238010730|gb|ACR36400.1| unknown [Zea mays]
Length = 320
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 14 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS---NLSFNALMYNEMMTL 68
F +P T + +Y AL+ K +++A EL + + N S + + YN ++
Sbjct: 88 FRRMPELGYTPDVFSYNALIKGLCAEKKSQEALELLLHMTANGGYNCSPDVVSYNIVIDG 147
Query: 69 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
G+V+K + E+ + PD+ TY+ I +D+ + L +M G
Sbjct: 148 LFKEGEVDKAYFLFHEMPGQGFPPDLVTYSSVIDGLCKAQAMDKAEASLQQML-YKGVMP 206
Query: 129 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 188
+ Y +L++ Y + LV A L + Q +TY+ LI Y +G + I
Sbjct: 207 NTRPYNSLIHGYCSLGQLVEA-VRLLKKMSGGGLQLNVVTYNMLIDYYCKIGRCAEARSI 265
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ S+ QK + Y +L Y G L ++ +++D
Sbjct: 266 FDSMVRRGQKPNATTYCSLLHGYATKGALVDMHDLLD 302
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 8/221 (3%)
Query: 38 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 97
KW EKAEELF V + + + +N +M G+V + +++ + R V PD+ +Y
Sbjct: 427 KW-EKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISY 485
Query: 98 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
N + T ID+ K LD + G D V Y L++ Y A + +A S
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVI-VSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
K +T +TY+ ++ G + +++ S+ ++ +M Y I++ L
Sbjct: 545 MKGLTP-DVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIING---LCKN 600
Query: 218 KEVGEIIDQWKQSATSD--FDISACNRLLGAFSDVGLTEKA 256
V E + + D DI N ++GA G E A
Sbjct: 601 NFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDA 641
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 24 SETYTALLHLYAG-AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ TYT L+H Y KW E ++ + + L + +Y ++ G+ + +
Sbjct: 237 NHTYTCLIHGYLSIGKWKEVV-QMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIF 295
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ + RK + P++ Y + + A ++ ++ FLD M +G S D ++ NI
Sbjct: 296 DSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM-VGNGVSPDH----HIFNIMFC 350
Query: 143 ASHLVNAESSTLVEA----EKSITQR---QWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
A A+ + + EA +K QR +TY LI LG D D + K +M
Sbjct: 351 AY----AKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVD--DAVLKFNQMI 404
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
+ MT ++ S L+ G +D+W+++ F++
Sbjct: 405 DEGMTPDIFV---FSSLVYGLCT-----VDKWEKAEELFFEV 438
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ ++A A + + A +L+ R+++ LS + Y+ M+ GQ+ + E+
Sbjct: 432 TYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEM 491
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P++ TYN+ I+ A N + V K +M +G D + Y ++ + H
Sbjct: 492 IENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQV-AGFRPDKITYSIVMEVLGHCGH 550
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
L AE + +E + + + Y L+ L+ GN DK
Sbjct: 551 LDEAE-AVFIEMRRDWAPDEPV-YGLLVDLWGKAGNVDK 587
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 4/247 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
TYT ++ + A+ +EL + + +++ + YN ++ Y +++ V E
Sbjct: 360 GHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFE 419
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ PD TY I A +D M + G S D Y +VN
Sbjct: 420 EMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ-EVGLSPDTFTYSVMVNCLGKG 478
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L A E T +TY+ +I L A N + + +++K +++ +
Sbjct: 479 GQLAAAYKLFCEMIENGCTP-NLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 537
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y ++ GHL E + + ++ D + L+ + G +KA ++ +
Sbjct: 538 YSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGL--LVDLWGKAGNVDKALGWYQAM 595
Query: 264 LQKNCAP 270
LQ P
Sbjct: 596 LQDGLQP 602
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 102/232 (43%), Gaps = 24/232 (10%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++H Y A + ++A ++FE ++++ + + Y ++ ++ G ++ + +
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PD FTY++ ++ + K EM ++G + + V Y ++ + A +
Sbjct: 457 QEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEM-IENGCTPNLVTYNIMIALQAKARN 515
Query: 146 LVNAESSTLVEAEKSIT----QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
N +V+ K + + ITY ++ + G+ D+ + ++ +R
Sbjct: 516 YEN-----VVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-------- 562
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQ---WKQSATSD---FDISACNRLLGAF 247
R++ Y +L L +D+ W Q+ D ++ CN LL AF
Sbjct: 563 RDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAF 614
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 41/84 (48%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A Y L+ L+ A +KA ++ + Q L N N +++ ++ + + + +
Sbjct: 566 APDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYI 625
Query: 81 VVEEIKRKNVVPDIFTYNLWISSC 104
V++ + + +VP + TY L +S C
Sbjct: 626 VLQNMLARGLVPSVQTYTLLLSCC 649
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 121/275 (44%), Gaps = 45/275 (16%)
Query: 36 GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIF 95
G+ W + +F+ + SNL+FNA++ + VG+ ++ + + PD+
Sbjct: 229 GSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGES-----LLHLMPKFMCSPDVV 283
Query: 96 TYNLWISSCA------------------------ATL-----------NIDQVKKFLDEM 120
T+N+ I++C AT N+ + +K D +
Sbjct: 284 TFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGI 343
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGL 179
D G + + Y L++ Y A + A++S L E ++ +T++ L+ +
Sbjct: 344 Q-DMGIAPNAAIYNTLMDGYFKAREV--AQASLLYEEMRTTGVSPDCVTFNILVWGHYKY 400
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
G + D++ K L ++ + S Y ++SS G L E +++ + + + + A
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLT-LSVVA 459
Query: 240 CNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
N L+GA+S GL +KA E + ++++ P++++
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSST 494
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T +LH +A +LF+ ++ ++ NA +YN +M Y +V + +L+ EE+
Sbjct: 319 TFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEM 378
Query: 86 KRKNVVPDIFTYNLWI 101
+ V PD T+N+ +
Sbjct: 379 RTTGVSPDCVTFNILV 394
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 43/100 (43%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+S T +LL W ++A L R+ + N + Y ++ Y + +E +
Sbjct: 490 PSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFL 549
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+E+K + + PD + I + N+++ + EMS
Sbjct: 550 WKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMS 589
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 112/258 (43%), Gaps = 10/258 (3%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + + +L +Y T+ A +F+ + + + N ++ + G+
Sbjct: 153 AFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHY 212
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V +++ R +VPD+F ++ +++ +D+ F+ +M + G + V Y +L+N Y
Sbjct: 213 VYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLINGY 271
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
++ + A+ +EK ++ R +TY LI G + K+D+ K LR +++
Sbjct: 272 VSLGDVEAAKGVLKFMSEKGVS-RNVVTYTLLI---KGYCKQCKMDEAEKVLRGMQEEAA 327
Query: 201 ----SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
R Y ++ Y G + + ++D+ + ++ CN L+ + G +A
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT-NLFICNSLINGYCKRGEIHEA 386
Query: 257 NEFHMLLLQKNCAPTNAS 274
++ N P + S
Sbjct: 387 EGVITRMVDWNLKPDSYS 404
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ ++ ++A+ LF ++ Q L N + YN ++ Y +G ++ + +++
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P + TY+ I+ +I++ K L++M +G ++Y LV YI +
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM-IKAGVDSKLIEYCTLVQGYIRSGE 904
Query: 146 L 146
+
Sbjct: 905 M 905
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
+ K + R+F L L + TY L+H Y+ A ++A L + + + L N
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ YN ++ V++ + ++ +K + P++ TYN I N+D K D
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843
Query: 119 EMSCDSGGSDDWVKYVNLVN 138
+M + G S V Y L+N
Sbjct: 844 KM-IEEGISPSVVTYSALIN 862
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 2/231 (0%)
Query: 40 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 99
++A ++++ + N + Y+ ++ Y+S+G VE V++ + K V ++ TY L
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 100 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
I +D+ +K L M ++ D Y L++ Y + +A L E +
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA-VRLLDEMLR 360
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
+ + LI Y G + + + + K S +Y +L Y GH E
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 220 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ D+ Q + N LL VG + A + L++++ AP
Sbjct: 421 AFNLCDKMLQEGIEP-TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 470
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 14/235 (5%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+AEE+F+++K S + + Y ++ Y V + V ++R+ + P I YN I
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 584
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
S + + +V L EM G + + V Y L++ + L A SS E +
Sbjct: 585 SGLFKSRRLVEVTDLLTEMGI-RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI----CILSSYLMLGHL 217
+ I + LY LG D+ + + QKM + C L S + +
Sbjct: 644 SANIIICSTMVSGLYR-LGRIDEANLLM-------QKMVDHGFFPDHECFLKSDIRYAAI 695
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 272
+++ + +D+ ++ +I N + G + A F +L K P N
Sbjct: 696 QKIADSLDESCKTFLLPNNI-VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
N ++YN + G+V+ + K VPD FTY I +A N+D+ +
Sbjct: 713 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 772
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYA 177
DEM G + V Y L+N + ++ A+ +K + +TY+ LI Y
Sbjct: 773 DEM-LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP-NVVTYNTLIDGYC 830
Query: 178 GLGNKD 183
+GN D
Sbjct: 831 KIGNMD 836
>gi|356529889|ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Glycine max]
Length = 526
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
+ LL LYA + + A +LF+++ + + S A +N +++ Y VG ++ + ++
Sbjct: 129 SKLLRLYASCGYLDDAHDLFDQMAKRDTS--AFPWNSLISGYAQVGHYDEAIALYFQMVE 186
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 147
+ V D+FT+ + CA ++ QV + + + +G + D LV++Y +V
Sbjct: 187 EGVEADLFTFPRVLKVCAGIGSV-QVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIV 245
Query: 148 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 207
A + + R ++++ ++ Y G + + I++ + + + S + +
Sbjct: 246 KAR-----KVFDKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTV 300
Query: 208 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 267
L+ LG +G I W S ++++S N L+ +S+ G EKA L+ +++
Sbjct: 301 LTGVSSLG----LGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERD 356
Query: 268 CAPTNA 273
N+
Sbjct: 357 VVSWNS 362
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 5/171 (2%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S TY+ ++ + A+ LF R+K S LS YN +M +E+ +
Sbjct: 326 SSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLF 385
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E+K N PD ++N+ I +I K+ L++M G + D Y + +N
Sbjct: 386 QEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ-QMGLTPDAYTYSSFINRLSK 444
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
+ A+ + IT + YD LI G G D+I+++ LR
Sbjct: 445 LGQMEEAKGAFDSMIASGITPDNHV-YDSLI---KGFGLNDEIEEVINLLR 491
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 104/243 (42%), Gaps = 21/243 (8%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+ L+ + ++ + LF+ + + +S N ++Y+ ++ + G + V+ +
Sbjct: 83 YSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMT 142
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + PD++TY I + D M+ + G V Y L+N +
Sbjct: 143 ERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT-EKGEEPSTVTYNVLINGLCKEGCI 201
Query: 147 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+A T++E K + + ++Y+ LI+ GL N K+D+ ++++ + NY
Sbjct: 202 GDAFKIFETMLEKGKRL---EVVSYNTLIM---GLCNNGKLDE---AMKLFSSLLEDGNY 252
Query: 205 I--------CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ ++ G L + EI D + + ++ C+ L+G + G+ +KA
Sbjct: 253 VEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFG-NLFTCHILIGEYIKSGIIDKA 311
Query: 257 NEF 259
E
Sbjct: 312 MEL 314
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y +++ K EKA +L ++ S+ N+ Y +M G+VE+ ++ E+
Sbjct: 12 SYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEM 71
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
KRK + D+ Y+ IS + +D+ K DEM + G S + V Y L+N
Sbjct: 72 KRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM-LEKGISPNVVVYSCLIN 123
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G + GE Y + +P S + Y LL + AE +F ++K +
Sbjct: 233 ISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTF 292
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+M+ LY V + +K+A V+ ++++N+ P++ TY + I + ++ +I +++ ++ M
Sbjct: 293 TCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETM 351
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
S G + ++ L+ + ++ L L E E +S+ + + + D L + Y L
Sbjct: 352 K--SEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSV-YGYL 408
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+D++ ++WK + Y +L++ L G + +V
Sbjct: 409 QREDEVRRVWKICEENPR------YNEVLAAILAFGKIDKV 443
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 3 KVFGIHSGERYFEG-LPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E FE L +S + +S Y+ LL +Y K + ++L +++ S + AL
Sbjct: 439 KIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGAL 498
Query: 61 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
++ ++ LY+ G+VEK + + + I+ K + P + ++ + ++ +K
Sbjct: 499 TWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQR 558
Query: 120 MSCDSGGSDDWVKYVNLVNIYITA 143
M S W Y L+ Y+ A
Sbjct: 559 MKQAGYQSRFWA-YQTLIQAYVNA 581
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 102/245 (41%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ A+ +KAE + ++ + + YN ++ Y S GQ ++ V +++
Sbjct: 253 TYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM 312
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++PD+ T N ++S I + D M+ G D Y ++N Y T
Sbjct: 313 TSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM-KGQKTDIFSYKIMLNGYATKGC 371
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
LV+ + I I ++ LI YA G D+ I+ +R + Y
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHI-FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYS 430
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++++ +G + + E +Q + IS + L+ F G KA + + ++
Sbjct: 431 TVIAALCRIGKMDDAVEKFNQMIDQGVAP-SISTYHFLIQGFCTHGDLLKAKDLVLQMMN 489
Query: 266 KNCAP 270
K P
Sbjct: 490 KGMRP 494
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 15/238 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSF--NALMYNEMMTLYMSVGQVEKVALVVE 83
+Y +L + + +A+EL + + NA+ YN ++ + G V K +
Sbjct: 181 SYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFN 240
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ ++ + PD+ TYN +++ +D+ + L +M D+W Y +L+ Y +
Sbjct: 241 EMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWT-YNSLIYGYSST 299
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLII--LYAGLGNKDKID---QIWKSLRMTKQK 198
A V K +T Q I D + + L A L KI ++ S+ M QK
Sbjct: 300 GQWKEA-----VRVSKKMTS-QGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQK 353
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+Y +L+ Y G L ++ E+ + + D N L+ A++ G+ ++A
Sbjct: 354 TDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAP-DSHIFNVLIKAYAKCGMLDRA 410
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+TAL+ +A ELF+ + + + + YN ++ Y G+++K ++E++
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+K +VPD +TY IS +T + + K F+D++
Sbjct: 567 HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 18/256 (7%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERV-KQSNLSF--NALMYNEMMTLYMSVGQVEKVAL 80
S T A+ L G + K ++ +E V K F N +YN ++ G ++K L
Sbjct: 327 SPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAEL 386
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + N+ P+ TY++ I S + +D + D M D G + Y +L+N
Sbjct: 387 LYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYA-YNSLINGQ 445
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL----RMTK 196
L AE S +E + T+ LI Y K Q+ K+ +M
Sbjct: 446 CKFGDLSAAE-SLFIEMTNKGVEPTATTFTSLISGYC------KDLQVQKAFKLYNKMID 498
Query: 197 QKMTSRNY--ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTE 254
+T Y ++S + E E+ D+ + +++ N L+ + G +
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTY-NVLIEGYCRDGKID 557
Query: 255 KANEFHMLLLQKNCAP 270
KA E + QK P
Sbjct: 558 KAFELLEDMHQKGLVP 573
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL++ A ++A LF+R++ +N+ N++ Y + G + K A+ +
Sbjct: 717 TYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNM-KEAIGLHHA 775
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++ + T+N+ I + K L EM+ ++G D V Y L+ Y + +
Sbjct: 776 MLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMT-ENGIFPDCVTYSTLIYEYCRSGN 834
Query: 146 L 146
+
Sbjct: 835 V 835
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 88/233 (37%), Gaps = 37/233 (15%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY L+ Y +KA EL E + Q L + Y +++ S G+V K
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597
Query: 82 VEEIKRKNVVPDIFTYNLWI--------------SSCAAT---LNIDQV----------- 113
++++ ++NV + Y+ + +SC +N+D V
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALK 657
Query: 114 ----KKFLDEMS--CDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQW 166
K F D + D G D V Y ++++ Y A E L+ E+
Sbjct: 658 QPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPN--V 715
Query: 167 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
+TY L+ G D+ ++K ++ S Y C L + G++KE
Sbjct: 716 VTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKE 768
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 50/99 (50%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T+ T+T+L+ Y +KA +L+ ++ + ++ N + +++ S ++ + + +
Sbjct: 468 PTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASEL 527
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+E+ + + P TYN+ I ID+ + L++M
Sbjct: 528 FDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+LL+ Y + EKA E+F ++++ N + YN ++ Y S G +++ ++ E+
Sbjct: 402 SYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEM 461
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ + PD+ + + +++C + ++ L G + V Y + + Y++
Sbjct: 462 EQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAK-SRGIQLNTVAYNSGIGSYLSLGD 520
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A + +TY+ LI LG + + ++ + +T Y
Sbjct: 521 YKKA-LVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYS 579
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ SY+ G L E + K++ D+ L+ A+SD G +A
Sbjct: 580 SVICSYVKQGKLTEAASTFNSMKETGCFP-DVLTYTTLIKAYSDDGSWRRA 629
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 2/194 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ALL YA +A E F+ +KQ+ L + + Y ++ Y Q EK V E+
Sbjct: 367 SYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEM 426
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ P+ +YN I + + + + L EM D G D + L+
Sbjct: 427 RKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQD-GIQPDVISISTLLTACGRCKQ 485
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L + L A+ Q + Y+ I Y LG+ K ++ S+R K + Y
Sbjct: 486 LTKID-IILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYN 544
Query: 206 CILSSYLMLGHLKE 219
++S LG E
Sbjct: 545 ILISGSCKLGRYVE 558
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT++++ Y+ E + +F+ + + N + YN ++ Y S G + + +
Sbjct: 332 TYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLL 391
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ + PDI +Y +++ + ++ ++ +EM ++ + V Y L++ Y +A
Sbjct: 392 KQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNK-VSYNALIDAYGSAGM 450
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A S L E E+ Q I+ L+ KID I + + ++ + Y
Sbjct: 451 LKEA-ISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYN 509
Query: 206 CILSSYLMLGHLKE 219
+ SYL LG K+
Sbjct: 510 SGIGSYLSLGDYKK 523
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 103/254 (40%), Gaps = 15/254 (5%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ L+A ++A LF +++ N YN ++ + GQ +++
Sbjct: 153 NDIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMD 212
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+++R + P TYN I++C A N + + +M+ + G D L+ I
Sbjct: 213 DMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPD-------LITHNIVL 265
Query: 144 SHLVNAESSTLVEAEKSITQRQWI-----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
S N + A I + + T + +I +G + +++ S+R +
Sbjct: 266 SAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTT 325
Query: 199 MTSR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y I+ SY + G + + D +I + N LLGA++ G+ +A
Sbjct: 326 CHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRP-NIVSYNALLGAYASHGMHTEA 384
Query: 257 NEFHMLLLQKNCAP 270
E LL Q P
Sbjct: 385 LETFKLLKQNGLRP 398
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 101/256 (39%), Gaps = 11/256 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++TY +L+H +A A A + + ++++ + + YN ++ + G +K + +
Sbjct: 188 TDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCK 247
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL-----VN 138
++ V PD+ T+N+ +S+ + + + M D + + +
Sbjct: 248 KMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIG 307
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
+Y A L N+ + ++ +TY ++ Y+ G + ++ + +
Sbjct: 308 LYGEAIELFNS-----MRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVR 362
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
+Y +L +Y G E E KQ+ DI + LL A+ EKA E
Sbjct: 363 PNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRP-DIVSYTSLLNAYGRSAQPEKARE 421
Query: 259 FHMLLLQKNCAPTNAS 274
+ + C P S
Sbjct: 422 VFNEMRKNACKPNKVS 437
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ A +KA EL +++ ++ + + + +N +++ + + Q K E +
Sbjct: 225 TYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIM 284
Query: 86 KRKNVVPDIFTYNLWISSCAATLNI--DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
K V PD T N+ I C + + + ++ F + D V Y +++ Y
Sbjct: 285 KSSKVAPDTCTMNIVIH-CLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVC 343
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
N ++ + + + + ++Y+ L+ YA G + + +K L+ + +
Sbjct: 344 GQAENCKAVFDIMVAEGV-RPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVS 402
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y +L++Y ++ E+ ++ +++A +S N L+ A+ G+ ++A
Sbjct: 403 YTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSY-NALIDAYGSAGMLKEA 454
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TYT+L+H + ++ + LF + + + MYN ++ + + G +++ ++
Sbjct: 323 TVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIM 382
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+++K + PD TYN + +D+ + ++EM+ G D V Y L++ Y
Sbjct: 383 GEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT-KRGIQPDLVSYNTLISGY 439
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 11/249 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM-TLYMSVGQVEKVALVVEEI 85
Y AL+ Y E A + +S YN + TL+M G+ + +VEE+
Sbjct: 222 YNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFME-GRAAEAHALVEEM 280
Query: 86 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
K + PD FTYN+ I+ C +K F E+ G V Y +L++ ++
Sbjct: 281 GEKGLAPDAFTYNILINGYCKEGKEKKAMKMF--EVMVGKGIRATVVTYTSLIHA-LSMK 337
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN- 203
+V +A + + Y+ LI + G+ D+ +I M K+++T +
Sbjct: 338 GMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGE--MEKKRITPDDV 395
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ +LG L E +I++ + D+ + N L+ +S G + A +
Sbjct: 396 TYNTLMRGLCLLGRLDEARGLIEEMTKRGIQP-DLVSYNTLISGYSMKGDIKDAVKVRDE 454
Query: 263 LLQKNCAPT 271
++ K PT
Sbjct: 455 MMGKGFNPT 463
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 45/294 (15%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
LPLS + T+ +L A +A EL ++ S NA+ YN ++ + + G+V+
Sbjct: 112 LPLS---TTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQ 164
Query: 77 KVALVVEEIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--------------- 120
++ E++ R + PD +TY IS ++ K DEM
Sbjct: 165 AGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNA 224
Query: 121 ----SCDSGGSDDWVKY------------VNLVNIYITASHLVN--AESSTLVE--AEKS 160
CD G + ++Y V N+++ + AE+ LVE EK
Sbjct: 225 LIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKG 284
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ + TY+ LI Y G + K ++++ + + T Y ++ + M G ++E
Sbjct: 285 LAPDAF-TYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQET 343
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+ + + D+ N L+ + G ++A E + +K P + +
Sbjct: 344 DRLFNDAVRRGIRP-DLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVT 396
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + TY L++ Y +KA ++FE + + + Y ++ G V++
Sbjct: 286 APDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDR 345
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ + R+ + PD+F YN I+S ++D+ + + EM DD V Y L+
Sbjct: 346 LFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDD-VTYNTLMRGL 404
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN-KDKI 185
L A + E K Q ++Y+ LI Y+ G+ KD +
Sbjct: 405 CLLGRLDEAR-GLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAV 449
>gi|357476703|ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509692|gb|AES90834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 715
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A +T TA++ +Y A+W++ A EL++R+K++ + ++YN ++ + VG +E+
Sbjct: 362 APNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAET 421
Query: 81 VVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+ ++K+ ++ PD ++Y ++ + +D+ K +EMS
Sbjct: 422 LFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMS 463
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++A+L +YA E+ LFER + + + + ++ + ++ G + + V++E+
Sbjct: 262 TFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEM 321
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V P++ YN + + + +EM DSG + + ++ IY A
Sbjct: 322 KSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM-IDSGIAPNEKTLTAVIKIYGKARW 380
Query: 146 LVNAESSTLVEAEKSITQRQW----ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMT 200
+A +E K + + W I Y+ L+ + A +G ++ + +++ ++ ++ K
Sbjct: 381 SKDA-----LELWKRMKENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPD 435
Query: 201 SRNYICILSSY 211
S +Y +L+ Y
Sbjct: 436 SWSYTAMLNIY 446
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQS-NLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y LL++ A E+AE LF +KQS + ++ Y M+ +Y S G V+K + EE+
Sbjct: 403 YNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEM 462
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+ + ++ I + ID + K D +S + G D
Sbjct: 463 SKFGIELNVMGCTCLIQCLGKAMEIDDLVKVFD-ISVERGVKPD 505
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 18/239 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ +KA FER+ ++ L + + ++ ++ +Y +G+VE+V + E
Sbjct: 227 TYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVVNLFERG 286
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD T+++ + D ++ L EM G + V Y L+ A
Sbjct: 287 RATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMK-SLGVQPNLVVYNTLLEAMGKAGK 345
Query: 146 LVNAES-------STLVEAEKSITQRQWITYDFLIILYA-GLGNKDKIDQIWKSLRMTKQ 197
A S S + EK++T +I +Y +KD + ++WK ++
Sbjct: 346 PGFARSLFEEMIDSGIAPNEKTLTA--------VIKIYGKARWSKDAL-ELWKRMKENGW 396
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
M Y +L+ +G ++E + KQS D + +L + G +KA
Sbjct: 397 PMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKA 455
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 35 AGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDI 94
G +KA +L + + + + Y++++T +VEK L+ +E+K V PD+
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 95 FTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES-- 151
+TY + I S C A L I+Q + +EM G S V Y L++ Y+ A + A
Sbjct: 324 YTYTILIDSFCKAGL-IEQAQWLFEEMR-SVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 152 STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 211
+V+A + +TY L+ GN K +++ L T S Y +
Sbjct: 382 HRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438
Query: 212 LMLGHLKEVGEIIDQWKQSATSD 234
+ ++ G ++D ++ D
Sbjct: 439 TLAPNVVTYGALVDGLCKAHKVD 461
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 23/263 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + A E+A+ LFE ++ S + Y ++ Y+ QV + + +
Sbjct: 325 TYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM--SCDSGGSDDW------------- 130
P+ TY + NI + + ++ + DS SD +
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V Y LV+ + +H V+ L S + I YD LI + G D +++
Sbjct: 445 VTYGALVD-GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF- 502
Query: 191 SLRMTKQKM--TSRNYICILSSYLMLGHLKEVGEIIDQW-KQSATSDFDISACNRLLGAF 247
L+MTK + Y ++ G L +++ Q K S T ++ ++
Sbjct: 503 -LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP--NVVTYTAMIDGL 559
Query: 248 SDVGLTEKANEFHMLLLQKNCAP 270
+G +EKA + L+ +K C+P
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSP 582
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TYTAL+H Y AK +A ++F R+ + N + Y ++ G + K
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414
Query: 81 VVEEI----------------KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
V ++ R + P++ TY + +D + LD M S
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAML-SS 473
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAE 150
G + + Y L++ + A + +A+
Sbjct: 474 GCEPNHIVYDALIDGFCKAGKIDSAQ 499
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY+ ++ A EKA LF+ +K ++ + Y ++ + G +E+ + E
Sbjct: 288 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 347
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ P + TY I + + Q M D+G + V Y LV+ A
Sbjct: 348 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVDGLCKA 406
Query: 144 SHLVNA 149
++ A
Sbjct: 407 GNISKA 412
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTA++ +EKA +L +++ S N + Y ++ G+++ + ++
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610
Query: 86 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
RK P+ TY + I+ CAA L +D+ + L EM W KY+
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGL-LDKARLLLGEMK-----QTYWPKYLQ 655
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 21/247 (8%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AE+++ + +N N + VG+ +K +++E+ RK VPD TY+ I+
Sbjct: 237 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 296
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI- 161
+++ EM G + D Y L++ + A + A+ L E +S+
Sbjct: 297 FLCHATKVEKAFLLFQEMKM-VGVTPDVYTYTILIDSFCKAGLIEQAQ--WLFEEMRSVG 353
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
+TY LI Y + + I+ + + Y ++ G++ +
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 413
Query: 222 EIIDQW---KQSATSDFDISACNR--------LLGAFSDVGLTE--KANEFHMLL---LQ 265
E+ + SA SDF +R GA D GL + K + H LL L
Sbjct: 414 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD-GLCKAHKVDHAHELLDAMLS 472
Query: 266 KNCAPTN 272
C P +
Sbjct: 473 SGCEPNH 479
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + + +A E++ + + + Y+ +M + VE V ++ E+
Sbjct: 197 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 256
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V P++++Y + I D+ + L +M + G D + + L+ + A
Sbjct: 257 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME-NEGCKPDVITHTVLIQVLCDAGR 315
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A+ + +KS + +TY L+ + G+ + +IW +++ Y
Sbjct: 316 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYT 374
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + +G + E E+ D+ KQ
Sbjct: 375 AVIDALCQVGRVFEALEMFDEMKQKG 400
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + A ++A ++F + ++N + L N ++ G+ ++ + ++
Sbjct: 512 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 571
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 572 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 627
Query: 146 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 202
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 628 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 684
Query: 203 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL-GAFSDVGLTEKANEF 259
+C IL S++ +G +KE II + S D S+C+ L+ G G+ EK+ EF
Sbjct: 685 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI-EKSIEF 742
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 5/226 (2%)
Query: 50 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 109
+K++ + NA YN ++ + G + V + VVP + TY++ + + +
Sbjct: 186 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 245
Query: 110 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++ V L EM G + Y + + A A L + E + IT+
Sbjct: 246 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQAKRFDEA-YRILAKMENEGCKPDVITH 303
Query: 170 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 304 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 362
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+D ++ A ++ A VG +A E + QK P S
Sbjct: 363 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 407
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 32 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 91
HL K E A EL ++ K +S +YN ++ + ++ + E+K
Sbjct: 764 HLCKQKKALE-AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG 822
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
PD FTYNL + + ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 823 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 879
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TY LL A E AE LF + + N +YN ++ + G EKV
Sbjct: 892 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 951
Query: 81 VVEEIKRKNVVPDIFTYNLWI 101
+ +++ + + PDI +Y + I
Sbjct: 952 LFQDMVDQGINPDIKSYTIII 972
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL + ++ E++ +K + N + Y ++ VG+V + + +E+
Sbjct: 337 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 396
Query: 86 KRKNVVPDIFTYNLWISS 103
K+K +VP+ ++YN IS
Sbjct: 397 KQKGIVPEQYSYNSLISG 414
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+T +A +H ++A ++F +K+ L + Y+ +++ + G+VEK + +E
Sbjct: 614 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 673
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K + P+IF YN + + +I + +K D M + G D V Y +++ Y +
Sbjct: 674 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP-EKGLEPDSVTYSTMIDGYCKSE 732
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
++ A S E Q Y+ L+ G+ +K +++ + + K T+ ++
Sbjct: 733 NVAEA-FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSF 790
Query: 205 ICILSSYLMLGHLKEVGEIIDQ 226
++ Y ++E ++ +
Sbjct: 791 NTLIDGYCKSCKIQEASQLFQE 812
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y A+++ K A +L E++ S L N ++Y+ ++ Y S G++E+ +++ +
Sbjct: 440 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM 499
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V PDIF YN IS + +++ +L E+ G D V + + Y
Sbjct: 500 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ-GRGLKPDAVTFGAFILGYSKTGK 558
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + + + Y LI + GN + I++ L +
Sbjct: 559 MTEAAKYFDEMLDHGLMPNNPL-YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCS 617
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
+ L G ++E ++ + K+ D+ + L+ F G EKA E H +
Sbjct: 618 AFIHGLLKNGRVQEALKVFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKAFELHDEMCL 676
Query: 266 KNCAP 270
K AP
Sbjct: 677 KGIAP 681
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 106/249 (42%), Gaps = 7/249 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S T+ L+ Y +A EL + +++ NL +A+ Y M+ + ++E
Sbjct: 403 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 462
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ + P++ Y++ I + A+ I++ ++ LD MSC SG + D Y +++ A
Sbjct: 463 KMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSC-SGVAPDIFCYNAIISCLSKA 521
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A S+ L+E + + +T+ I+ Y+ G + + + M + N
Sbjct: 522 GKMEEA-STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD--EMLDHGLMPNN 578
Query: 204 --YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y +++ + G+L E I + D+ C+ + G ++A +
Sbjct: 579 PLYTVLINGHFKAGNLMEALSIFRRLHALGVLP-DVQTCSAFIHGLLKNGRVQEALKVFS 637
Query: 262 LLLQKNCAP 270
L +K P
Sbjct: 638 ELKEKGLVP 646
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + A E+A LF+ +++ NL + + Y +M Y +GQ +V + E++
Sbjct: 824 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM 883
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K V PD TY L I + N+ + K DE+
Sbjct: 884 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 918
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 85/206 (41%), Gaps = 6/206 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ A+ + + + L+ N +Y+ ++ VG +++ + +
Sbjct: 230 TYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM 289
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K +VP+ +TY + + +++ K +EM +G D+ L++ ++
Sbjct: 290 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ-KTGLKPDYNACSALIDGFMREGD 348
Query: 146 L--VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ V +V I ITY+ LI G +K +I K + K SR
Sbjct: 349 IDEVLRIKDVMVSCGIPI---NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRT 405
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQ 229
+ ++ Y ++ E++D+ ++
Sbjct: 406 FCLLIEGYCREHNMGRALELLDEMEK 431
>gi|452823780|gb|EME30788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 925
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 22/265 (8%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S Y++LL + + A +++E ++Q +A MYN ++ S+G +E +V
Sbjct: 469 SYVYSSLLQACVRSNRFDLALKVYEHLQQEGYVMDAHMYNTLVNGAGSLGDLETAERLVR 528
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS---DDWVKYVNLVNIY 140
+ + NV D N ++ SCA +I + + EMS + GS + Y L+N+Y
Sbjct: 529 QAQEYNVGLDTALCNTFLVSCAKHHDISRAEHLFLEMSNGNMGSLALPNGKTYNILINLY 588
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWI--------TYDFLIILYAGLGNKDKIDQIWKSL 192
+ VE + +RQ + T+ +I Y + + K +++K L
Sbjct: 589 CKM-------NPPQVERALEMVERQRMYGFSPDESTFCPIIDAYFRVNDPFKAIELFKKL 641
Query: 193 RMTKQKMTSR-NYICILSSYLMLGHLKEVGEIIDQWKQSATS--DFDISACNRLLGAFSD 249
R SR Y +++ G+L + E+ + + S TS D + N LL AF +
Sbjct: 642 RTEGSPKLSRVTYDTVINGLGRSGYLDDAFEVF-RIRASETSLESLDDTTYNNLLNAFVE 700
Query: 250 VGLTEKANEFHMLLLQKNCAPTNAS 274
++A F L P+ A+
Sbjct: 701 NNRLDEAERFFQESLASGFQPSTAT 725
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 16/259 (6%)
Query: 10 GERYF-----EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+RYF EG+ T T+ ++ + + E A FE +K ++ + + YN
Sbjct: 134 AKRYFNKMLSEGI---EPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNT 190
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
M+ Y V ++E+ E+K +N+ P + TY I + +D + ++EM
Sbjct: 191 MINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GY 249
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
G + + Y L+ A + A S +K I + LI GN D
Sbjct: 250 GIKANAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDA 309
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-------WKQSATSDFDI 237
+ K++ + +Y ++ +Y G + +++D+ + +T +
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMES 369
Query: 238 SACNRLLGAFSDVGLTEKA 256
SA N L+G + G T KA
Sbjct: 370 SAYNPLIGYLCNNGQTAKA 388
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 7/167 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+T ++Y AL + + A+ F ++ + +N M+ + G+VE
Sbjct: 113 RTIKSYDALFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRF 172
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
E++K + + PD+ TYN I+ +++ +K+ EM V Y L+ Y+
Sbjct: 173 FEDMKNREITPDVITYNTMINGYYRVKKMEEAEKYFVEMK-GRNIEPTVVTYTTLIKGYV 231
Query: 142 TASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQ 187
+ + +A LVE K + ITY L+ GL N +K+ +
Sbjct: 232 SVDQVDDA--LRLVEEMKGYGIKANAITYSTLL---PGLCNAEKMSE 273
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 107/236 (45%), Gaps = 7/236 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ L+A WT++A LF +++ +A N ++ + GQ ++E
Sbjct: 135 TDIYNMMIRLHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIME 194
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ +K + P TYN I++C ++ N + K +M+ ++G D V + +++ Y T
Sbjct: 195 DMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKMT-ENGVGPDLVTHNIILSAYKTG 253
Query: 144 SHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ A S E K R T + +I LG +K I+KS+R + +
Sbjct: 254 AQYAKALS--YFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPD 311
Query: 203 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ I+ Y + G ++ + +I + N L+GA++ G+ ++A
Sbjct: 312 VVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKP-NIVSYNTLMGAYASHGMNKEA 366
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 11/245 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+ YA ++A +F +K S L + + Y ++ Y Q +K V E +
Sbjct: 349 SYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMM 408
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR + P+I +YN I + + + + + L EM D G + V L+ S
Sbjct: 409 KRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQD-GIYPNAVSICTLLAACGRCSR 467
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN + L AE+ + I Y+ I Y +G +K +++S+R +K + +
Sbjct: 468 KVNIDV-VLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFT 526
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++S + E E + S D I A+S +TE + F+ + +
Sbjct: 527 VLISGCCKMTKYCEALEFL-----SEMMDLKIPMTKE---AYSSGKITEAESMFNKMKMA 578
Query: 266 KNCAP 270
C+P
Sbjct: 579 -GCSP 582
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 85/205 (41%), Gaps = 2/205 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+++HLY+ E +F + L N + YN +M Y S G ++ V I
Sbjct: 314 TFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAI 373
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + PD+ +Y ++S + + ++ + M D + V Y +++ Y +
Sbjct: 374 KNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDK-LKPNIVSYNAMIDAYGSNGL 432
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L E E+ ++ L+ K ID + ++ K+ + Y
Sbjct: 433 LAEA-VEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYN 491
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQS 230
+ SY+ +G ++ + ++S
Sbjct: 492 SAIGSYMNVGEFEKATSMYRSMRKS 516
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/253 (17%), Positives = 102/253 (40%), Gaps = 1/253 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+T E + ++ Y+ A A ++ ++++ + N L+ N + +++ ++EK
Sbjct: 243 RTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRF 302
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+E ++ +VP++ TYN I +++ + LD+M G D V Y ++
Sbjct: 303 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMP-SKGCLPDKVSYYTIMGYLC 361
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+V A++ R +TY+ LI + + D+ K ++
Sbjct: 362 KEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDK 421
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y I+ + G + E ++I++ D+ ++ F +G +KA +
Sbjct: 422 VGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 481
Query: 262 LLLQKNCAPTNAS 274
++ P S
Sbjct: 482 IMHTHGYKPNTVS 494
>gi|414883803|tpg|DAA59817.1| TPA: hypothetical protein ZEAMMB73_625576 [Zea mays]
Length = 350
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 14 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQS---NLSFNALMYNEMMTL 68
F +P T + +Y AL+ K +++A EL + + N S + + YN ++
Sbjct: 88 FRRMPELGYTPDVFSYNALIKGLCAEKKSQEALELLLHMTANGGYNCSPDVVSYNIVIDG 147
Query: 69 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
G+V+K + E+ + PD+ TY+ I +D+ + L +M G
Sbjct: 148 LFKEGEVDKAYFLFHEMPGQGFPPDLVTYSSVIDGLCKAQAMDKAEASLQQML-YKGVMP 206
Query: 129 DWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQI 188
+ Y +L++ Y + LV A L + Q +TY+ LI Y +G + I
Sbjct: 207 NTRPYNSLIHGYCSLGQLVEA-VRLLKKMSGGGLQLNVVTYNMLIDYYCKIGRCAEARSI 265
Query: 189 WKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ S+ QK + Y +L Y G L ++ +++D
Sbjct: 266 FDSMVRRGQKPNATTYCSLLHGYATKGALVDMHDLLD 302
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++++ A+ +KAE +++ + N YN ++ Y S+GQ+ + +++++
Sbjct: 175 TYSSVIDGLCKAQAMDKAEASLQQMLYKGVMPNTRPYNSLIHGYCSLGQLVEAVRLLKKM 234
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++ TYN+ I + + D M G + Y +L++ Y T
Sbjct: 235 SGGGLQLNVVTYNMLIDYYCKIGRCAEARSIFDSMV-RRGQKPNATTYCSLLHGYATKGA 293
Query: 146 LVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
LV+ ++ I R ++ LI YA DK ++ +R
Sbjct: 294 LVDMHDLLDLMIRDGIPIEHR---VFNILIYAYAKHETVDKAMAVFAEMR 340
>gi|356536919|ref|XP_003536980.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Glycine max]
Length = 716
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 11/218 (5%)
Query: 21 AKTSETYTALLHLYAGAKW---TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
A + TYT L+ Y A T + E R+ + + Y +++ + VG +++
Sbjct: 344 APNTRTYTTLMKGYMNAGRVSDTVRMLEAMRRLDDKGSQPDHVSYTTVVSALVKVGAMDR 403
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
V+ E+ R V ++ TYN+ + L ID+ ++ L EM D+G D V Y
Sbjct: 404 ARQVLAEMTRIGVPANLITYNVLLKGYCKQLQIDKARELLKEMVDDAGIQPDVVSY---- 459
Query: 138 NIYITASHLVNAESSTLV---EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
NI I LV+ + L E I+Y L+ +A G +++ +
Sbjct: 460 NILIDGCILVDDSAGALSFFNEMRARGIAPTKISYTTLMKAFAYSGQPKLAHRVFNEMDS 519
Query: 195 TKQ-KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
+ K+ + ++ Y LG ++E +++ + K+S
Sbjct: 520 DPRVKVDLIAWNMLVEGYCRLGLVEEAKKVVQKMKESG 557
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 110/263 (41%), Gaps = 22/263 (8%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+ +E + L+ Y+ A A + +++ + + + N + + + G+V+K
Sbjct: 160 RGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEF 219
Query: 82 VEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E ++R V PD++TYN I C A +D ++ + + +G D + Y Y
Sbjct: 220 AERMRRVGVEPDVYTYNCLIKGLCGARRVVDAME--MIGVMLQNGCPPDKISY------Y 271
Query: 141 ITASHLVNAESSTLVEAEKSITQR---------QWITYDFLIILYAGLGNKDKIDQIWKS 191
S L + VE + + QR +TY+ LI A G+ D+ + +
Sbjct: 272 TVMSFLCKEKR---VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRE 328
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ ++ Y I+ S+ + G + E EI+ + S D+ + ++ F +G
Sbjct: 329 SEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEM-ISKGCQPDVVTYSTVVDGFCRIG 387
Query: 252 LTEKANEFHMLLLQKNCAPTNAS 274
++A + + + +C P +
Sbjct: 388 ELDQARKMMKHMYKNDCKPNTVT 410
>gi|356536609|ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 787
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 116/240 (48%), Gaps = 7/240 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y++L+H+ A A A+ ++++++ L + + Y +++ + +GQ E + +E+
Sbjct: 491 SYSSLIHILASADKPHLAKSYLKKMQEAGLVSDCVPYCVVISSFTKLGQFEMAEELYKEM 550
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V PD+ Y ++I++ A ++ + +++EM +G + Y +L+ +Y +
Sbjct: 551 LGYAVQPDVIIYGVFINAFADAGSVKEAINYVNEMR-KAGLPGNPAIYNSLIKLYTKVGY 609
Query: 146 LVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A E+ L++ S + + +I LY ++ +I++SL M + +Y
Sbjct: 610 LKEAQETYKLIQL--SDEGPSLFSSNCMIDLYTERLMVEQAKEIFESL-MKNEVANEFSY 666
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFS-DVGLTEKANEFHMLL 263
+L Y +G L E +I Q ++ DI + N +LG +S D L E F ++
Sbjct: 667 AMMLCMYKKIGRLDEAIQIATQMRRLGFLT-DILSYNNVLGLYSMDRRLREATETFKEMI 725
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S TY L+ Y A E F R+ + + N + N M+ LY + G++ + L+
Sbjct: 245 SSHTYATLIDTYGKGGQFHAACETFARIIRQGRALNTVTLNTMIHLYGNCGRLRQACLLF 304
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+++ VPD +TYN+ IS + K+ M + D V Y L+ Y T
Sbjct: 305 QKMGEFRCVPDTWTYNILISLNIKNNKVKLAAKYFARMK-KAFLEPDVVSYRTLLYAYST 363
Query: 143 ASHLVNAE 150
+ AE
Sbjct: 364 RKMVREAE 371
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTA--LLHLYAGAKWTEKAEELFERVKQSNLSFNA 59
TKV + + ++ + LS + +++ ++ LY E+A+E+FE + ++ ++ N
Sbjct: 605 TKVGYLKEAQETYKLIQLSDEGPSLFSSNCMIDLYTERLMVEQAKEIFESLMKNEVA-NE 663
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
Y M+ +Y +G++++ + +++R + DI +YN + + + + + E
Sbjct: 664 FSYAMMLCMYKKIGRLDEAIQIATQMRRLGFLTDILSYNNVLGLYSMDRRLREATETFKE 723
Query: 120 MSCDSGGSDDWVKYVNLVNIYI 141
M SG D + L NI +
Sbjct: 724 M-IKSGVQPDDFTFRALANILL 744
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 110/263 (41%), Gaps = 22/263 (8%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+ +E + L+ Y+ A A + +++ + + + N + + + G+V+K
Sbjct: 160 RGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEF 219
Query: 82 VEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E ++R V PD++TYN I C A +D ++ + + +G D + Y Y
Sbjct: 220 AERMRRVGVEPDVYTYNCLIKGLCGARRVVDAME--MIGVMLQNGCPPDKISY------Y 271
Query: 141 ITASHLVNAESSTLVEAEKSITQR---------QWITYDFLIILYAGLGNKDKIDQIWKS 191
S L + VE + + QR +TY+ LI A G+ D+ + +
Sbjct: 272 TVMSFLCKEKR---VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRE 328
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ ++ Y I+ S+ + G + E EI+ + S D+ + ++ F +G
Sbjct: 329 SEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEM-ISKGCQPDVVTYSTVVDGFCRIG 387
Query: 252 LTEKANEFHMLLLQKNCAPTNAS 274
++A + + + +C P +
Sbjct: 388 ELDQARKMMKHMYKNDCKPNTVT 410
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 109/249 (43%), Gaps = 6/249 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
E + ++ Y+ A A ++ ++++ + N + N + + + +++K E
Sbjct: 281 PEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAE 340
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ + P++ TYN I +DQ + +D+M G S D V Y ++ +
Sbjct: 341 RMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMP-SKGCSPDKVSYYTVMGLLCRD 399
Query: 144 SHLVNAESSTLVEAEKSITQ--RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L E L++ ++ ++ +TY+ LI + + G+ D+ +I + + K+
Sbjct: 400 KRL--NEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDK 457
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y I+ +Y G +++ E++ + S D D+ +L F +G ++A +
Sbjct: 458 VEYSAIVHAYCKEGKIQKAKELVSEM-FSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQ 516
Query: 262 LLLQKNCAP 270
+ + +C P
Sbjct: 517 QMYKHHCKP 525
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ALL YA +A ++F +KQ+ + + Y ++ Y + +K + + I
Sbjct: 364 SYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMI 423
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR N+ P+I +YN I + + ++ + L EM D + V L+
Sbjct: 424 KRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDK-IHPNVVSICTLLAACGRCGQ 482
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V + + L AE + + Y+ I Y +G DK ++ S+R K K S Y
Sbjct: 483 KVKID-TVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYT 541
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
++S + E +++
Sbjct: 542 VLISGCCKMSKFGEALSFMEE 562
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 8/224 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+++HLY+ E E F + L N + YN ++ Y + G + V EI
Sbjct: 329 TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEI 388
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ PD+ +Y +++ + + ++ +M + + V Y L++ Y +
Sbjct: 389 KQNGFRPDVVSYTSLLNAYGRSRKPQKAREIF-KMIKRNNLKPNIVSYNALIDAYGSNGL 447
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A L E E+ ++ L+ G K KID + + M K+ + Y
Sbjct: 448 LEDA-IEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYN 506
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQ------SATSDFDISACNRL 243
+ SY+ +G + ++ + ++ S T IS C ++
Sbjct: 507 SAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKM 550
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 11/238 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ L+A T++A LF +++ +A YN ++ + GQ +++
Sbjct: 150 TDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMD 209
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ R + P TYN I++C ++ N + +M+ D+G D V + NI +TA
Sbjct: 210 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-DNGVGPDLVTH----NIMLTA 264
Query: 144 --SHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
S +++ + E K R T++ +I L DK I+ S++ K +
Sbjct: 265 FKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECH 324
Query: 201 SR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ ++ Y + GH++ + +I + N LLGA++ G+ +A
Sbjct: 325 PDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKP-NIVSYNALLGAYAARGMENEA 381
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + + +A E++ + + + Y+ +M + VE V ++ E+
Sbjct: 287 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 346
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V P++++Y + I D+ + L +M + G D + + L+ + A
Sbjct: 347 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME-NEGCKPDVITHTVLIQVLCDAGR 405
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A+ + +KS + +TY L+ + G+ + +IW +++ Y
Sbjct: 406 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYT 464
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + +G + E E+ D+ KQ
Sbjct: 465 AVIDALCQVGRVFEALEMFDEMKQKG 490
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 4/196 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TY LL A E AE LF + + N +YN ++ + G EKV
Sbjct: 982 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 1041
Query: 81 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNI 139
+ +++ + + PDI +Y + I + C A D + F + + G D + Y NL+
Sbjct: 1042 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL--EMGLEPDLITY-NLLID 1098
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
+ S + S E +K TY+ LI+ G + ++++ L K
Sbjct: 1099 GLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKP 1158
Query: 200 TSRNYICILSSYLMLG 215
Y ++ Y + G
Sbjct: 1159 NVFTYNALIRGYSVSG 1174
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + A ++A ++F + ++N + L N ++ G+ ++ + ++
Sbjct: 602 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 661
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 662 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 717
Query: 146 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 202
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 718 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 774
Query: 203 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL-GAFSDVGLTEKANEF 259
+C IL S++ +G +KE II + S D S+C+ L+ G G+ EK+ EF
Sbjct: 775 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI-EKSIEF 832
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 5/226 (2%)
Query: 50 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 109
+K++ + NA YN ++ + G + V + VVP + TY++ + + +
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 335
Query: 110 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++ V L EM G + Y + + A A L + E + IT+
Sbjct: 336 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQAKRFDEA-YRILAKMENEGCKPDVITH 393
Query: 170 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 394 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 452
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+D ++ A ++ A VG +A E + QK P S
Sbjct: 453 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 497
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A EL ++ K +S +YN ++ + ++ + E+K PD FTYNL +
Sbjct: 863 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 922
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
+ ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 923 DAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 969
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +K E+A LF +++ + N YN ++ G+ + + EE+
Sbjct: 1092 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151
Query: 86 KRKNVVPDIFTYNLWISSCAATLNID 111
K P++FTYN I + + + D
Sbjct: 1152 LTKGWKPNVFTYNALIRGYSVSGSTD 1177
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL + ++ E++ +K + N + Y ++ VG+V + + +E+
Sbjct: 427 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEM 486
Query: 86 KRKNVVPDIFTYNLWISS 103
K+K +VP+ ++YN IS
Sbjct: 487 KQKGIVPEQYSYNSLISG 504
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 20/231 (8%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
T LL+ + T+ ++F+++ + + N +YN ++ G EK ++ E++
Sbjct: 172 TVLLNSLVKERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEE 231
Query: 88 KNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K V PDIFTYN IS C +++ + + D M SG + D V Y +L++ + +
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEAL-SVQDRME-RSGVAPDIVTYNSLIHGFSREGRM 289
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN--- 203
E++ L K + +TY LI Y +++ I ++LR+ ++ M SR
Sbjct: 290 --REATRLFRKIKGVVMANHVTYTTLIDGYC------RMNDIDEALRL-REVMESRGFCP 340
Query: 204 ----YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
Y IL G ++E ++ + +I+ CN L+ A+ +
Sbjct: 341 GVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNIT-CNTLINAYCKI 390
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
Y L+H + + +EKAE+L +++ + + YN ++++Y + V +
Sbjct: 204 HVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDR 263
Query: 85 IKRKNVVPDIFTYN 98
++R V PDI TYN
Sbjct: 264 MERSGVAPDIVTYN 277
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++H K A +L+ + +S N YN ++ + +G +++ ++ E+K
Sbjct: 236 YTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMK 295
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
KN+ PD++T+N+ I + ID+ +EM + V Y +L++ HL
Sbjct: 296 LKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK-HKNMFPNIVTYTSLIDGLCKNHHL 354
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
A + E+ I Q +Y L+ G + Q ++ L + + R Y
Sbjct: 355 ERAIALCKKMKEQGI-QPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTY 411
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + ++A L +K N++ + +N ++ G++++ + EE+
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K KN+ P+I TY I ++++ +M + G D Y L++
Sbjct: 330 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMK-EQGIQPDVYSYTILLDALCKGGR 388
Query: 146 LVNAE 150
L NA+
Sbjct: 389 LENAK 393
>gi|18417671|ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F+G +S E Y LL Y K EK + +R+K+S + YN M+ +Y G
Sbjct: 761 FDGFSVSL---EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 817
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+++VA V++E+K + PD+ +YN I + +++ + EM + D V Y
Sbjct: 818 WIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDK-VTY 876
Query: 134 VNLV 137
NLV
Sbjct: 877 TNLV 880
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 100/244 (40%), Gaps = 4/244 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ +L +Y +K + L+ R+++S + +N MYN ++ +++++ EE+
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R P+ T+N+ + +V + + G D + Y ++ Y
Sbjct: 692 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDY 749
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
N SS + + Y+ L+ Y +K I K ++ + Y
Sbjct: 750 TNM-SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+++ Y G + EV +++ + K+S D+ + N L+ A+ G+ E+A + +
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGP-DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 267 NCAP 270
N P
Sbjct: 868 NIIP 871
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN----LSFNALM-------------------- 61
T+ LL +Y AK +K ELF K+ +S+N ++
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 760
Query: 62 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 111
YN ++ Y Q+EK +++ +K+ PD +TYN+ I+ ID
Sbjct: 761 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 820
Query: 112 QVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+V L E+ +SG D Y L+ Y
Sbjct: 821 EVADVLKELK-ESGLGPDLCSYNTLIKAY 848
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/112 (18%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y++++ +Y + +KAEE+ + +KQ + + M+ Y G++E ++ +
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ P+I YN I+ ++ + + C+ G D Y +++
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRL-CNIGLEPDETSYRSMI 391
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 401 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 460
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 124
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 461 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 502
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++ L+H + A+ ++A + E +KQ S + + Y ++ Y + V +++E+
Sbjct: 331 SFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEM 390
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ P++ TY + + + + D++ D G + D Y +L+ I A
Sbjct: 391 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKED-GVAPDASFYNSLIYILGRAGR 449
Query: 146 LVNAES 151
L +A S
Sbjct: 450 LEDAYS 455
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++TYT L++ + AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ + + P++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKS 710
Query: 144 SHLVNA 149
L A
Sbjct: 711 GDLAEA 716
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 106/268 (39%), Gaps = 36/268 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ + + A + + + S N ++Y ++ ++ + V++E+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + + PDIF YN I + +D+ + FL EM ++G + Y ++ YI AS
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASE 537
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFL-------------------------------II 174
+A+ E + + + + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 175 LYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
L GL DK+D +I++ +R +Y +++ + LG++++ I D+ +
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEF 259
+ ++ N LLG F G EKA E
Sbjct: 658 LTP-NVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 42/289 (14%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y LL + + EKA+EL + + L NA+ Y ++ Y G + + + +E+K
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 87 RKNVVPDIFTYNLWISSCA-----------------------ATLN--IDQVKKF----- 116
K +VPD F Y + C A N I+ V KF
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 117 -------LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
L + S D G + V Y N++ Y+ + A + + + ITY
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTY-NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 170 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WK 228
L+ Y +G + ++ ++ + Y I++++L G + ++DQ +
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 229 QSATSD---FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++A D IS C LL F+ VG E A + +++ P +A+
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L++ ++ +KA +F+ + + L+ N ++YN ++ + G++EK +++E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 138
K + P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 139 ----IYITASHLVNAESSTL--------------VEAEKSITQRQW------------IT 168
I I ++ SST E + + R +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 169 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
Y+ +I GN + +++ ++ T Y +L+ Y +G E+ + D+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-A 866
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKA 256
+A + D + ++ AF G+T KA
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
EKA+ LF+ + S L A Y ++ Y V + ++ E+K++N+V +TY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ ++ ++D + EM SG + V Y L+ ++ S +A L E ++
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDA-MRVLKEMKEQ 481
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQ 187
Y+ LII GL ++D+
Sbjct: 482 GIAPDIFCYNSLII---GLSKAKRMDE 505
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 2/203 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A + Y A A++ + +++ + N ++ ++ Y G+V + +
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++ D TY + ++ +D ++ EM G + D Y L+N + +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-GKGIAPDVFSYGVLINGFSKLGN 642
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E+ +T I Y+ L+ + G +K ++ + + + Y
Sbjct: 643 MQKASSIFDEMVEEGLTP-NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 206 CILSSYLMLGHLKEVGEIIDQWK 228
I+ Y G L E + D+ K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMK 724
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+ Y A ++A L ++ + L+ N + Y ++ G+V+ ++ E+
Sbjct: 429 TYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM 488
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + P++ TYN I+ NI+Q K ++EM +G D + Y +++ Y
Sbjct: 489 SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL-AGFFPDTITYTTIMDAYCKMGE 547
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
+ A + +K + Q +T++ L+
Sbjct: 548 MAKAHELLRIMLDKGL-QPTIVTFNVLM 574
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 104/283 (36%), Gaps = 44/283 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ +AE++ +K + + ++Y +++ + G V + +E+
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KRK +VPD TY I + + +K EM G D V Y L++ Y A
Sbjct: 384 KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM-LSKGLKPDEVTYTALIDGYCKAGE 442
Query: 146 LVNAESSTLVEAEKSIT----------------------------------QRQWITYDF 171
+ A S EK +T Q TY+
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502
Query: 172 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI----IDQW 227
LI +GN ++ ++ + + + + Y I+ +Y +G + + E+ +D+
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 228 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
Q F++ L+ F G+ E +L K P
Sbjct: 563 LQPTIVTFNV-----LMNGFCMSGMLEDGERLIKWMLDKGIMP 600
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 106/280 (37%), Gaps = 36/280 (12%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y+ ++ Y + K +L E +++ L N YN +++ G+V + V+ +
Sbjct: 289 SYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVM 348
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGG- 126
K + + PD Y IS + N+ K DEM C +G
Sbjct: 349 KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKV 408
Query: 127 ---------------SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 171
D V Y L++ Y A + A S EK +T +TY
Sbjct: 409 VEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP-NVVTYTA 467
Query: 172 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
L+ G D +++ + + Y +++ +G++++ +++++ +
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
D ++ A+ +G KA+E ++L K PT
Sbjct: 528 FFP-DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPT 566
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y +LHL ++A L +++ + + Y+ ++ Y V Q+ KV ++EE+
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+RK + P+ +TYN IS T + + ++ L M D+ V Y L++ + + +
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV-YTTLISGFGKSGN 372
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V+ E E ++ ++TY +I G + +++ + K Y
Sbjct: 373 -VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ Y G +KE + +Q + + ++ L+ G + ANE + +
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTP-NVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 266 KNCAP 270
K P
Sbjct: 491 KGLQP 495
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A +F + + +N + YN ++ L +G+V++ ++ +++ + VPD+ +Y++ +
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
+ +V K ++E+ G + Y ++++ +V AE V + I
Sbjct: 296 GYCQVEQLGKVLKLMEELQ-RKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
+ Y LI +G G + +K K+K +++ S M+ L + G+
Sbjct: 355 PDN-VVYTTLI---SGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS---MIHGLCQAGK 407
Query: 223 IIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+++ K S D L+ + G ++A H +++K P
Sbjct: 408 VVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 104/257 (40%), Gaps = 12/257 (4%)
Query: 10 GERYFEGLPLSA---KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 66
+RYF + LS T T+ ++ + + E A FE +K +S + + YN M+
Sbjct: 134 AKRYFNKM-LSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMI 192
Query: 67 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
Y V ++E+ E+K KN+ P + TY I + +D + ++EM G
Sbjct: 193 NGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GYGI 251
Query: 127 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 186
+ + Y L+ A + A S +K I + LI GN D
Sbjct: 252 KPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAA 311
Query: 187 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW-------KQSATSDFDISA 239
+ KS+ + +Y ++ +Y G + +++D+ + +T + SA
Sbjct: 312 DVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPSA 371
Query: 240 CNRLLGAFSDVGLTEKA 256
N ++ + G T KA
Sbjct: 372 YNPIVEYLCNNGQTSKA 388
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 13/273 (4%)
Query: 7 IHSGERYFEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+ + R+FE + + + TY +++ Y K E+AE+ F +K N+ + Y
Sbjct: 166 VETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTT 225
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ Y+SV QV+ +VEE+K + P+ TY+ + + + + L EM
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKY 285
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
D ++ L++ A +L +A + L + + Y LI Y G D+
Sbjct: 286 IAPTDNSIFMRLISSQCKAGNL-DAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQ 344
Query: 185 ----IDQ-IWKSLRMTKQK---MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFD 236
+D+ I K + + Q M Y I+ G + ++ Q + D
Sbjct: 345 AVKLLDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQ--D 402
Query: 237 ISACNRLLGAFSDVGLTEKANEFHMLLLQKNCA 269
+A N L+ S G + A E ++L++
Sbjct: 403 PTALNTLIRGHSQEGSPDSAFELLKIMLRRKVG 435
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+T ++Y AL + A+ F ++ + +N M+ + G+VE
Sbjct: 113 RTIKSYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRF 172
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
E++K + + PD+ TYN I+ +++ +K+ EM V Y L+ Y+
Sbjct: 173 FEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMK-GKNIEPTVVTYTTLIKGYV 231
Query: 142 TASHLVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ + +A LVE K + ITY L+ GL N +K+ + L+ K
Sbjct: 232 SVDQVDDA--LRLVEEMKGYGIKPNAITYSTLL---PGLCNAEKMSEARSILKEMVDKYI 286
Query: 201 SRN----YICILSSYLMLGHLKEVGEII 224
+ ++ ++SS G+L +++
Sbjct: 287 APTDNSIFMRLISSQCKAGNLDAAADVL 314
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 35/192 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ E AE LF+R+ L + + YN +M Y G ++K ++ +
Sbjct: 395 TYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMM 454
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY----- 140
+ V PD+ TYN+ I +++ K LDE++ G S D V + N++ +
Sbjct: 455 RSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELT-RRGFSPDVVTFTNIIGGFSNKGN 513
Query: 141 --------------------ITASHLVNAESSTLVEAEKSITQRQW---------ITYDF 171
+T S L+N T AE ++ + I Y+
Sbjct: 514 FEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNS 573
Query: 172 LIILYAGLGNKD 183
LI + LGN D
Sbjct: 574 LIHGFCSLGNID 585
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
K+EE + ++ NLS N ++N ++ + G + K A V +++ ++PD F+Y +
Sbjct: 306 KSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMM 365
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
+ +I K+L +M G Y L++ ++ AE ++ I
Sbjct: 366 AGYCKVKDISNALKYLGKM-LKRGIRPSVATYTLLIDSCCKPGNMEMAEYLF----QRMI 420
Query: 162 TQ---RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLG 215
T+ ++Y+ L+ G G K + + ++ L M + S + Y ++ + G
Sbjct: 421 TEGLVPDVVSYNTLM---NGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRG 477
Query: 216 HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ E +I+D+ + S D+ ++G FS+ G E+A
Sbjct: 478 LVNEAKDILDELTRRGFSP-DVVTFTNIIGGFSNKGNFEEA 517
>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
Length = 847
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 7 IHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
IHS + +GL L++ T TA++ YA E+A E+FER++ L + + + M
Sbjct: 120 IHS-RIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAM 178
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
MT Y +G + L+ ++ + + PD F + I +C++ +++Q + S
Sbjct: 179 MTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSV 238
Query: 126 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
D V L+N Y A LV+ ES +L S+ + +T+ ++ YA G+ +
Sbjct: 239 ECDGVVGNA-LLNFYAKAG-LVH-ESRSLFS---SMKVKNVVTWSAIVAAYAQNGHHEPA 292
Query: 186 DQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
++++ + + ++ +L S G +K++
Sbjct: 293 VELFREMLLDGVAPNKVTFVSLLFSCSHAGLIKDLAR 329
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ A+ A++L ++ + ++ +N ++ Y GQ+EK +V+ E+
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-- 143
+ + P++ +Y +++ I + LD+M D + + N I A
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF-----HKDVLPNAQVYNAIIDAYV 341
Query: 144 SHLVNAESSTLVEAEKS-ITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKM 199
H N ++ LVE KS +TY+ LI GL N+ +I ++I SL +
Sbjct: 342 EHGPNDQAFILVEKMKSNGISPSIVTYNLLI---KGLCNQSQISEAEEIINSLSNHRLIP 398
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ +Y ++S+ G++ + ++ + + + ++L+ G +
Sbjct: 399 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS-TVRTYHQLISGLGGAGRLNEMEYL 457
Query: 260 HMLLLQKNCAPTNA 273
+ ++Q N P+NA
Sbjct: 458 YQKMMQNNVVPSNA 471
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T ET+ L+ Y EK + ++++ L N + Y ++ + G++ + +
Sbjct: 258 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 317
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++++ K+V+P+ YN I + DQ +++M + G S V Y L+
Sbjct: 318 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN-GISPSIVTYNLLIKGLC 376
Query: 142 TASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
S + AE E S++ + I +Y+ LI GN DK + + +
Sbjct: 377 NQSQISEAE-----EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
K T R Y ++S G L E+ + + Q+ + + N ++ A+S G KA
Sbjct: 432 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSKYGNEIKAE 490
Query: 258 EFHMLLLQK 266
+ +LQK
Sbjct: 491 DLRKEMLQK 499
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AEE+ + + + L ++YN ++ Y G++E ++K +++ PD TYN I+
Sbjct: 174 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 233
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
I + L EM D+G + + L++ Y L
Sbjct: 234 GLCKAERITNAQDLLMEMQ-DNGVNPTVETFNTLIDAYGRTGQL 276
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ + + +A E++ + + + Y+ +M + VE V ++ E+
Sbjct: 162 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 221
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V P++++Y + I D+ + L +M + G D + + L+ + A
Sbjct: 222 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME-NEGCKPDVITHTVLIQVLCDAGR 280
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A+ + +KS + +TY L+ + G+ + +IW +++ Y
Sbjct: 281 ISDAK-DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYT 339
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + +G + E E+ D+ KQ
Sbjct: 340 AVIDALCQVGRVFEALEMFDEMKQKG 365
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 8/198 (4%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T TY LL A E AE LF + + N +YN ++ + G EKV
Sbjct: 857 SPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH 916
Query: 81 VVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKF--LDEMSCDSGGSDDWVKYVNLV 137
+ +++ + + PDI +Y + I + C A D + F L EM G D + Y NL+
Sbjct: 917 LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM----GLEPDLITY-NLL 971
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ S + S E +K TY+ LI+ G + ++++ L
Sbjct: 972 IDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGW 1031
Query: 198 KMTSRNYICILSSYLMLG 215
K Y ++ Y + G
Sbjct: 1032 KPNVFTYNALIRGYSVSG 1049
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 108/239 (45%), Gaps = 13/239 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + A ++A ++F + ++N + L N ++ G+ ++ + ++
Sbjct: 477 TYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQL 536
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K N+ P TYN ++ + +V L+EM S + + Y +++
Sbjct: 537 KEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY-HSNYPPNLITYNTILDCLCK--- 592
Query: 146 LVNAESSTLVEAEKSITQRQWIT--YDFLIILYAGLGNKDKIDQIWKSL-RMTKQKMTSR 202
N + ++ S+T + I + ++Y GL +++ ++ + +M K +
Sbjct: 593 --NGAVNDALDMLYSMTTKGCIPDLSSYNTVIY-GLVKEERYNEAFSIFCQMKKVLIPDY 649
Query: 203 NYIC-ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL-GAFSDVGLTEKANEF 259
+C IL S++ +G +KE II + S D S+C+ L+ G G+ EK+ EF
Sbjct: 650 ATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGI-EKSIEF 707
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 5/226 (2%)
Query: 50 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 109
+K++ + NA YN ++ + G + V + VVP + TY++ + + +
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 210
Query: 110 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
++ V L EM G + Y + + A A L + E + IT+
Sbjct: 211 VETVLWLLREMEA-HGVKPNVYSYTICIRVLGQAKRFDEA-YRILAKMENEGCKPDVITH 268
Query: 170 DFLIILYAGLGN-KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
LI + G D D WK ++ + QK YI +L + G + V EI + K
Sbjct: 269 TVLIQVLCDAGRISDAKDVFWK-MKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 327
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
+D ++ A ++ A VG +A E + QK P S
Sbjct: 328 ADGYND-NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 372
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 32 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 91
HL K E A EL ++ K +S +YN ++ + ++ + E+K
Sbjct: 729 HLCKQKKALE-AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCG 787
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
PD FTYNL + + ++ I+++ K +EM G +V Y +++ + + L A
Sbjct: 788 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMH-RKGYESTYVTYNTIISGLVKSRRLEQA 844
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +K E+A LF +++ + N YN ++ G+ + + EE+
Sbjct: 967 TYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026
Query: 86 KRKNVVPDIFTYNLWISSCAATLNID 111
K P++FTYN I + + + D
Sbjct: 1027 LTKGWKPNVFTYNALIRGYSVSGSTD 1052
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 342 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 401
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 124
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 402 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 443
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++ L+H + A+ ++A + E +KQ S + + Y ++ Y + V +++E+
Sbjct: 272 SFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEM 331
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ P++ TY + + + + D++ D G + D Y +L+ I A
Sbjct: 332 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKED-GVAPDASFYNSLIYILGRAGR 390
Query: 146 LVNAES 151
L +A S
Sbjct: 391 LEDAYS 396
>gi|2980784|emb|CAA18211.1| puative protein [Arabidopsis thaliana]
gi|7269983|emb|CAB79800.1| puative protein [Arabidopsis thaliana]
Length = 1075
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVG 73
F+G +S E Y LL Y K EK + +R+K+S + YN M+ +Y G
Sbjct: 932 FDGFSVSL---EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 988
Query: 74 QVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+++VA V++E+K + PD+ +YN I + +++ + EM D V Y
Sbjct: 989 WIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR-GRNIIPDKVTY 1047
Query: 134 VNLV 137
NLV
Sbjct: 1048 TNLV 1051
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 100/244 (40%), Gaps = 4/244 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ +L +Y +K + L+ R+++S + +N MYN ++ +++++ EE+
Sbjct: 803 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 862
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
R P+ T+N+ + +V + + G D + Y ++ Y
Sbjct: 863 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDY 920
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
N SS + + Y+ L+ Y +K I K ++ + Y
Sbjct: 921 TNM-SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 979
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
+++ Y G + EV +++ + K+S D+ + N L+ A+ G+ E+A + +
Sbjct: 980 MINIYGEQGWIDEVADVLKELKESGLGP-DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 1038
Query: 267 NCAP 270
N P
Sbjct: 1039 NIIP 1042
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSN----LSFNALM-------------------- 61
T+ LL +Y AK +K ELF K+ +S+N ++
Sbjct: 872 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 931
Query: 62 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 111
YN ++ Y Q+EK +++ +K+ PD +TYN+ I+ ID
Sbjct: 932 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 991
Query: 112 QVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+V L E+ +SG D Y L+ Y
Sbjct: 992 EVADVLKELK-ESGLGPDLCSYNTLIKAY 1019
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 111/249 (44%), Gaps = 5/249 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ + KAE+L +++S + + +N ++ Y + GQ+EK V+ ++
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++K + D+ ++ + + I + LD+M + V Y ++++ YI +
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV-YNSIIDAYIESGD 524
Query: 146 LVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
++ LVE K S +TY+ L+ D+ +++ +LR + +Y
Sbjct: 525 --TEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 582
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
I+S+ G + E++ + + + C+ L+ A + G + +L
Sbjct: 583 NTIISACCNKGDTDKALELLQEMNKYGIRP-TLRTCHTLVSALASAGRVHDMECLYQQML 641
Query: 265 QKNCAPTNA 273
KN P+++
Sbjct: 642 HKNVEPSSS 650
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 55/101 (54%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A ++ Y +++ Y + TE+A L E++K S +S + + YN ++ Q+++
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
++ ++ + + PD+ +YN IS+C + D+ + L EM+
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
KA+++FE + + L ++YN ++ Y V + + E++K +++ PD TYN I
Sbjct: 352 KAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITASHLVNAESSTLVEAEKS 160
+ + + + + EM + G D V+ N L++ Y TA L + L + ++
Sbjct: 412 NGLCKLEMVTKAEDLVMEM--EKSGVDPSVETFNTLIDAYGTAGQLEKC-FTVLSDMQQK 468
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ I++ ++ + G + I + ++ Y I+ +Y+ G ++
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 528
Query: 221 GEIIDQWKQSATS 233
++++ K S S
Sbjct: 529 LLLVEKMKNSGVS 541
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 11/233 (4%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A ++F+ + ++ N + YN M+ ++ G +E + +++ P++ TYN+ +S
Sbjct: 213 ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSI 161
T +D+ + +DEM+ S D + + + T ES T++ +S+
Sbjct: 273 GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT------GESQTMLSLFAESL 326
Query: 162 TQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLK 218
+ + IL GL G K Q+++ L T T+ Y +++ Y + L+
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386
Query: 219 EVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
I +Q K I+ N L+ + + KA + M + + P+
Sbjct: 387 GAFCIFEQMKSRHIRPDHITY-NALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
ET+ L+ Y A EK + ++Q + + + + ++ + G++ + ++++
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K+V P+ YN I + + + +Q +++M +SG S V Y L+ +S
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMK-NSGVSASIVTYNLLLKGLCRSS 558
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ AE + + + ++Y+ +I G+ DK ++ + + + T R
Sbjct: 559 QIDEAEELIYTLRNQGL-RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTC 617
Query: 205 ICILSSYLMLGHLKEV 220
++S+ G + ++
Sbjct: 618 HTLVSALASAGRVHDM 633
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ G T++A +L + + + NA+ YN ++ G V +VE +
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITAS 144
K++ PD TYN+ + A ++D+ K L M DS +D D + Y L++ +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A + EK + +T + L+ G+ +K ++WK + +K S Y
Sbjct: 439 RLHQALDIYDLLVEK-LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 205 ICILSSYLMLGHL 217
++ + G L
Sbjct: 498 TAMIDGFCKTGML 510
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+ S+TYTA++ + A+ L +++ S L + YN +++ G +++ +
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
EE++R N PD+ ++N+ I +I + L MS +G S D Y L+N ++
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS-RAGLSPDLFTYSKLINRFL 610
Query: 142 TASHLVNAES 151
+L A S
Sbjct: 611 KLGYLDEAIS 620
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y ++ + K EKA EL +K S S++ + + ++ + G++++ ++E+
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + D+ Y I +D+ K DE+ + G S + Y L+ +
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDSPCAITYNTLIRGFCKLGQ 297
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A E+ + + TY LI G+G + Q+ + ++ + Y
Sbjct: 298 LKEASEIFEFMIERGVRPNVY-TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
I++ G + + EI++ K+ T +I+ N LLG G ++A++ L+L+
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITY-NILLGGLCAKGDLDEASKLLYLMLK 415
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
L A T LL+ A KA EL++++ S + N+ Y M+ + G +
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ +++ + P +F YN +SS ++DQ + +EM D+ D V + +++
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP-DVVSFNIMID 572
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
+ A + +AE S LV ++ TY LI + LG D+
Sbjct: 573 GSLKAGDIKSAE-SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEM 245
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + P+ TY+ IS +D+ ++ C SG D V Y ++ Y A
Sbjct: 246 QDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRC-SGIEIDQVLYQTMIVAYERAGL 304
Query: 146 LVNAE 150
+ +A+
Sbjct: 305 VAHAK 309
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 103/249 (41%), Gaps = 11/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ + + A +++++ + + ++Y+ ++ L + + + +
Sbjct: 11 TYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIFSRL 70
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR + PD+ YN I+ + + + EM +G D V Y L+ +Y+
Sbjct: 71 KRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRT-AGVMPDTVSYCTLLTMYVENQK 129
Query: 146 LVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A S S + E + S T + +I +Y LG + D+++ S+R + +
Sbjct: 130 FLEALSLFSEMREIQCSF---DLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVS 186
Query: 204 YICILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
Y +L Y G + GE I ++ Q + ++ N ++ + EKAN
Sbjct: 187 YNTLLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQ 243
Query: 262 LLLQKNCAP 270
+ + P
Sbjct: 244 EMQDRGIEP 252
>gi|255641788|gb|ACU21163.1| unknown [Glycine max]
Length = 481
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
+ LL LYA + + A +LF+++ + + S A +N +++ Y VG ++ + ++
Sbjct: 129 SKLLRLYASCGYLDDAHDLFDQMAKRDTS--AFPWNSLISGYAQVGHYDEAIALYFQMVE 186
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 147
+ V D+FT+ + CA ++ QV + + + +G + D LV++Y +V
Sbjct: 187 EGVEADLFTFPRVLKVCAGIGSV-QVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIV 245
Query: 148 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 207
A + + R ++++ ++ Y G + + I++ + + + S + +
Sbjct: 246 KAR-----KVFDKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTV 300
Query: 208 LSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKN 267
L+ LG +G I W S ++++S N L+ +S+ G EKA L+ +++
Sbjct: 301 LTGVSSLG----LGVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERD 356
Query: 268 CAPTNA 273
N+
Sbjct: 357 VVSWNS 362
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ Y + EKA L ++ QS L+ N + Y + +GQV+ ++ E+
Sbjct: 152 TYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEM 211
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + +I TYN ++ + NI Q K ++EM +G D + + L++ Y
Sbjct: 212 CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV-AGMYPDTITFTTLMDAYCKTGE 270
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
+V A L E Q IT++ L+
Sbjct: 271 MVKAH-ELLREMLDRGLQPTVITFNVLM 297
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
Y+ ++ Y G+++KV +++E++ K + P+++TYN I + +D ++ L EM
Sbjct: 13 YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+ G D V Y L++ + + + A E EK +I Y +I G
Sbjct: 73 -NQGIVPDTVVYTTLIDGFCKLGN-IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGK 130
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN 241
+ D+++ + + Y ++ Y G +++ + +Q QS + ++
Sbjct: 131 MMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP-NVVTYT 189
Query: 242 RLLGAFSDVGLTEKANEFHMLLLQKNCA 269
L +G + ANE LL + C
Sbjct: 190 ALADGLCKLGQVDTANE----LLHEMCG 213
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 102/280 (36%), Gaps = 36/280 (12%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y+ +++ Y +K +L + ++ L N YN ++ L G+V+ V+ E+
Sbjct: 12 SYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREM 71
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS------------------CDSGG- 126
+ +VPD Y I NI K DEM C G
Sbjct: 72 INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131
Query: 127 ---------------SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 171
D V Y L++ Y + + A S + +T +TY
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP-NVVTYTA 190
Query: 172 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
L LG D +++ + ++ Y +++ G++++ +++++ + +
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
D L+ A+ G KA+E +L + PT
Sbjct: 251 MYP-DTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 11/217 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL + A EL + L N YN ++ G + + ++EE+
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PD T+ + + T + + + L EM D G + + L+N + +
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREML-DRGLQPTVITFNVLMNGFCMSGM 305
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L + E EK I TY+ L+ Y N +I+K + S Y
Sbjct: 306 LEDGERLLAWMLEKGIMP-NTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY- 363
Query: 206 CILSSYLMLGHLKEVGEIIDQW---KQSATSDFDISA 239
+ L+ GH K + + W K+ A F+++A
Sbjct: 364 ----NILIKGHCK-ARNMKEAWFLHKEMAEKGFNLTA 395
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 85/201 (42%), Gaps = 3/201 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YTA++ +A+++F ++ + + + Y ++ Y G++EK + ++
Sbjct: 118 YTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + P++ TY +D + L EM C G + Y +LVN + ++
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEM-CGKGLQLNICTYNSLVNGLCKSGNI 236
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
A + E E + IT+ L+ Y G K ++ + + + T +
Sbjct: 237 RQA-VKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV 295
Query: 207 ILSSYLMLGHLKEVGEIIDQW 227
+++ + M G L++ GE + W
Sbjct: 296 LMNGFCMSGMLED-GERLLAW 315
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++TYT L++ + AEE+F ++ ++ + Y ++ + +G ++K + + +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+ + + P++ YN+ + + I++ K+ LDEMS G + V Y +++ Y +
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTIIDGYCKS 710
Query: 144 SHLVNA 149
L A
Sbjct: 711 GDLAEA 716
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 106/268 (39%), Gaps = 36/268 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ + + A + + + S N ++Y ++ ++ + V++E+
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + + PDIF YN I + +D+ + FL EM ++G + Y ++ YI AS
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEASE 537
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFL-------------------------------II 174
+A+ E + + + + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 175 LYAGLGNKDKID---QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
L GL DK+D +I++ +R +Y +++ + LG++++ I D+ +
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEF 259
+ ++ N LLG F G EKA E
Sbjct: 658 LTP-NVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 114/289 (39%), Gaps = 42/289 (14%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y LL + + EKA+EL + + L NA+ Y ++ Y G + + + +E+K
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 87 RKNVVPDIFTYNLWISSCA-----------------------ATLN--IDQVKKF----- 116
K +VPD F Y + C A N I+ V KF
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 117 -------LDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
L + S D G + V Y N++ Y+ + A + + + ITY
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTY-NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 170 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ-WK 228
L+ Y +G + ++ ++ + Y I++++L G + ++DQ +
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 229 QSATSD---FDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
++A D IS C LL F+ VG E A + +++ P +A+
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L++ ++ +KA +F+ + + L+ N ++YN ++ + G++EK +++E+
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN------- 138
K + P+ TY I + ++ + + DEM D +V Y LV+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV-YTTLVDGCCRLND 747
Query: 139 ----IYITASHLVNAESSTL--------------VEAEKSITQRQW------------IT 168
I I ++ SST E + + R +T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 169 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
Y+ +I GN + +++ ++ T Y +L+ Y +G E+ + D+
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-A 866
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKA 256
+A + D + ++ AF G+T KA
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
EKA+ LF+ + S L A Y ++ Y V + ++ E+K++N+V +TY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
+ ++ ++D + EM SG + V Y L+ ++ S +A L E ++
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLIKTFLQNSRFGDA-MRVLKEMKEQ 481
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQ 187
Y+ LII GL ++D+
Sbjct: 482 GIAPDIFCYNSLII---GLSKAKRMDE 505
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 2/203 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A + Y A A++ + +++ + N ++ ++ Y G+V + +
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++ D TY + ++ +D ++ EM G + D Y L+N + +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-GKGIAPDVFSYGVLINGFSKLGN 642
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E+ +T I Y+ L+ + G +K ++ + + + Y
Sbjct: 643 MQKASSIFDEMVEEGLTP-NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 206 CILSSYLMLGHLKEVGEIIDQWK 228
I+ Y G L E + D+ K
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMK 724
>gi|357491817|ref|XP_003616196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517531|gb|AES99154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 981
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
PL + S TY L+ LY A + A ++F + +S ++ + +N ++ + S G + +
Sbjct: 287 PLKPRLSTTYNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLE 346
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
++++++ + + + TYN+++S A +ID + + + G D V Y L+
Sbjct: 347 AESLLDKMEERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIR-EVGLFPDTVTYRALL 405
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
T ++V A + E EK+ ++ ++ +Y G+ DK + + ++
Sbjct: 406 GALCT-ENMVQAVEGVIDEMEKNSVSLDALSLSGIVKMYINEGDVDKANDLL------QK 458
Query: 198 KMTSRNYIC--ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
++IC I+ ++ G E I + + A DI N ++ A+ +K
Sbjct: 459 YGEPPSFICAAIIDAFAEKGFWAEAENIFYRKRDKARQARDILEFNVMIKAYGKANHYDK 518
Query: 256 A 256
A
Sbjct: 519 A 519
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 14/234 (5%)
Query: 29 ALLHLYAGAKWTEKAEELFERVK-QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
A++ +A + +AE +F R + ++ + + L +N M+ Y +K L+ EE+K
Sbjct: 469 AIIDAFAEKGFWAEAENIFYRKRDKARQARDILEFNVMIKAYGKANHYDKAVLLFEEMKY 528
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 147
+ + P TYN I + +DQ + EM + G + ++ Y L
Sbjct: 529 QGISPADSTYNSIIQMLSGADLVDQARDLTVEMQ-EMGFKPHCQTFSAVIGCYARLGQLS 587
Query: 148 NAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+A +V E + + Y LI G ++D+ + + ++ S N +
Sbjct: 588 DA---VIVYQEMISAGVKPNETVYGALI---NGFAEHGRLDEALQYFHLMQESGLSANLV 641
Query: 206 C---ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ SY G LK V I Q Q+ D++A + ++ AF+++GL +A
Sbjct: 642 VLTTLMKSYSKAGDLKGVKSIYKQM-QNMEGVLDLAARSSMITAFAELGLVSEA 694
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 13/254 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +++ + +GA ++A +L +++ + ++ ++ Y +GQ+ +V +E+
Sbjct: 537 TYNSIIQMLSGADLVDQARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEM 596
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V P+ Y I+ A +D+ ++ M +SG S + V L+ Y A
Sbjct: 597 ISAGVKPNETVYGALINGFAEHGRLDEALQYFHLMQ-ESGLSANLVVLTTLMKSYSKAGD 655
Query: 146 LVNAES----STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
L +S +E + R +I +A LG + ++ + T Q S
Sbjct: 656 LKGVKSIYKQMQNMEGVLDLAARSS-----MITAFAELGLVSEAKLTFEKFKETGQA-DS 709
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE-FH 260
+Y ++ Y +G + E +I ++ K S D + NR+L ++ K E +
Sbjct: 710 TSYGIMMYVYKDIGMIDEAIKIAEEMKISGLLR-DCVSYNRVLTCYAINRQFHKCGELLY 768
Query: 261 MLLLQKNCAPTNAS 274
+++ K P + +
Sbjct: 769 EMIVSKKLLPDDGT 782
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 5 FGIHSGER----YFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
F + + E+ Y EG P +++ TYTAL L K F + NL +A
Sbjct: 795 FPVEAAEQLELCYQEGKPYASQA--TYTALYSLLGMHTLALK----FAQTVLENLDSSA- 847
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
YN + Y S G VEK + +++ K+V PDI TY + ++ VKK
Sbjct: 848 AYNVAIYAYASAGDVEKALNIHMKMRDKHVEPDIVTYINLVGCYGKAGMVEGVKK 902
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL A+ L+ER+ ++ S + + YN ++ + VG++++ + +
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ VPD+ TYN I+ +D+ ++ L M + NLV +T +
Sbjct: 72 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-----------NLVPDVVTYNS 120
Query: 146 LVNA--ESSTLVEAEKSITQRQW----ITYDFLI 173
LVN ++ + EA I + + ITY LI
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLI 154
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 104/250 (41%), Gaps = 10/250 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +A ELF + + L +A+ Y + G+VE L+++++
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K VPD+ ++N I+ +D+ + L M G S + + + L+ A
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA-KGCSPNAISFNTLICGQCRAGK 303
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A +T E K + +TY+ IL GL + +I +++ + +
Sbjct: 304 WKKA-MTTFKEMLKRGVKPTVVTYN---ILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359
Query: 206 CILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+++ ++ L + G++ D + ++ ++ N L+ + ++A E
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419
Query: 261 MLLLQKNCAP 270
+ +++K C P
Sbjct: 420 VAMVEKGCVP 429
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y++LL+ + A + EKA+E+F+ +KQ + N + +N +M Y S G+ E+ ++ ++
Sbjct: 337 SYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDM 396
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN-LVNIYITAS 144
+ P++ T ++CA ++V+ E + V N + YI A
Sbjct: 397 AEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALN--VPAFNAAITAYIEAG 454
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
A++ V E+++ + +T+ LI LG+ + ++ + +T
Sbjct: 455 QFDEAKALLEVMEEQNL-RPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPC 513
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSA 231
+++++ G E I D +++
Sbjct: 514 SALINAFAKHGMYNEARTIFDDMRKAG 540
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 4/248 (1%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSN--LSFNALMYNEMMTLYMSVGQVEKVALVV 82
ETY AL++++ A A ++F+ + Q+ ++ + YN ++ S GQ K +
Sbjct: 123 ETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEIC 182
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+ + V PD+ TYN+ +S+ + + D + D + + ++N
Sbjct: 183 KRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNI-ILNCLTK 241
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+A + + + + +T++ L+ +YA G K + + + T
Sbjct: 242 LGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIV 301
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
+ +L +Y G E +++ + A + D+ + + LL AF G EKA E L
Sbjct: 302 TFNTLLGAYASQGMYTEALQVVGLLVK-AKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDL 360
Query: 263 LLQKNCAP 270
+ Q++ P
Sbjct: 361 MKQRSRKP 368
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ALLH+YA KA+E F+ + ++ + +N ++ Y S G + VV +
Sbjct: 267 TFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLL 326
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ +Y+ +++ ++ ++ D M S + V + L++ Y +A
Sbjct: 327 VKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRS-RKPNLVTFNGLMDAYASAGK 385
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A AE I + +T L A +K+ ++ ++ + + +
Sbjct: 386 YERARELLHDMAEARI-EPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFN 444
Query: 206 CILSSYLMLGHLKEVGEIID 225
+++Y+ G E +++
Sbjct: 445 AAITAYIEAGQFDEAKALLE 464
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 46/250 (18%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ L+A + ++A LF +K + YN +M ++ GQ + +
Sbjct: 87 TDIYNCMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNALMNVHGRAGQWRWALQIFD 146
Query: 84 EIKR--KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++ + K + P +YN I++C ++ + + M+ D+G D + Y +++ +
Sbjct: 147 DMLQAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRMT-DNGVGPDLMTYNIILSAFK 205
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMT 200
+ +A + K + ++ +++ ++ LG + ++K +R M +
Sbjct: 206 SGGQPRHAVAYYDHLISKKVPLDRY-SHNIILNCLTKLGRFEDAINLFKEMRKMNGCEPD 264
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ +L Y + G + + E D + I N LLGA++ G+ +A +
Sbjct: 265 VVTFNALLHVYALCGQITKAQETFDMMIGEGMAP-TIVTFNTLLGAYASQGMYTEALQVV 323
Query: 261 MLLLQKNCAP 270
LL++ P
Sbjct: 324 GLLVKAKFEP 333
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL+ Y A ++A LF ++++ L+ L YN + Y +G +E+ ++ EE+
Sbjct: 347 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEM 406
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +P++ TY + + ++ ++F DEM G D Y + +
Sbjct: 407 GEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEM-LSKGLQPDCFAYNTRICAELILGD 465
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A V + I+ +TY+ LI GN ++ + + Y
Sbjct: 466 IARALELREVLMLEGISS-DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 524
Query: 206 CILSSYLMLGHLKEVGEIID 225
C++ ++ G L+E +I +
Sbjct: 525 CLIHAHCERGLLREARKIFN 544
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ L+
Sbjct: 308 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 367
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+++R + P + TYN+ I ++++ + +EM
Sbjct: 368 FGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMG 407
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ ++ ++ LF+++++ ++ ++ + G+V+ +++E+
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++ DI YN+ I S +D KF E+ + G D V Y +++ + A+
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANR 288
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
L A EK+ +R TY + ++ G G+ K D+ + L + K + +
Sbjct: 289 LDEA-VEMFEHLEKN--RRVPCTYAYNTMI-MGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
Y CIL+ +G + E + ++ K+ A +
Sbjct: 345 AYNCILTCLRKMGKVDEALRVFEEMKKDAAPNL 377
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 53/257 (20%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L++
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
EE+ +K + P+++T+N +L++ +
Sbjct: 681 EELMQKGLTPNVYTWN------------------------------------SLLDALVK 704
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
A + A E T Q +TY LI + +K W+ ++ K ++
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQ-VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC-----------NRLLGAFSDVG 251
+Y ++S G++ E G + D++K A SAC NR + AFS
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFK--ANGGVPDSACYNAMIEGLSNGNRAMDAFS--- 818
Query: 252 LTEKANEFHMLLLQKNC 268
L E+ + + K C
Sbjct: 819 LFEETRRRGLHIHNKTC 835
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 107/248 (43%), Gaps = 10/248 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++ + A ++A E+FE ++++ YN M+ Y S G+ ++ ++E
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K +P + YN ++ +D+ + +EM D+ + + Y L+++ A
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA--APNLSTYNILIDMLCRAGK 392
Query: 146 LVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L A E S+ + + + I+ L K+D+ K+ + +
Sbjct: 393 LDCA-----FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDE 447
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKANEFHML 262
I S LG + V + +++ SD ++ L+ F + G E ++ +
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 263 LLQKNCAP 270
++ +NC+P
Sbjct: 508 MVNQNCSP 515
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 84/211 (39%), Gaps = 8/211 (3%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S YT+L+ + E ++++ + N S + + N M G+ EK + E
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
EIK + VPD +Y++ I ++ + M + G D Y +++ +
Sbjct: 542 EIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMK-EQGCVLDTRAYNIVIDGFCKC 600
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
VN L E + + +TY +I GL D++D+ + K K N
Sbjct: 601 GK-VNKAYQLLEEMKTKGFEPTVVTYGSVI---DGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 204 ---YICILSSYLMLGHLKEVGEIIDQWKQSA 231
Y ++ + +G + E I+++ Q
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ A+ A++L ++ + ++ +N ++ Y GQ+EK +V+ E+
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-- 143
+ + P++ +Y +++ I + LD+M D + + N I A
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF-----HKDVLPNAQVYNAIIDAYV 526
Query: 144 SHLVNAESSTLVEAEKS-ITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKM 199
H N ++ LVE KS +TY+ LI GL N+ +I ++I SL +
Sbjct: 527 EHGPNDQAFILVEKMKSNGISPSIVTYNLLI---KGLCNQSQISEAEEIINSLSNHRLIP 583
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ +Y ++S+ G++ + ++ + + + ++L+ G +
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS-TVRTYHQLISGLGGAGRLNEMEYL 642
Query: 260 HMLLLQKNCAPTNA 273
+ ++Q N P+NA
Sbjct: 643 YQKMMQNNVVPSNA 656
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T ET+ L+ Y EK + ++++ L N + Y ++ + G++ + +
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 502
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++++ K+V+P+ YN I + DQ +++M +G S V Y L+
Sbjct: 503 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK-SNGISPSIVTYNLLIKGLC 561
Query: 142 TASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
S + AE E S++ + I +Y+ LI GN DK + + +
Sbjct: 562 NQSQISEAE-----EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
K T R Y ++S G L E+ + + Q+ + + N ++ A+S G KA
Sbjct: 617 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSKYGNEIKAE 675
Query: 258 EFHMLLLQK 266
+ +LQK
Sbjct: 676 DLRKEMLQK 684
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AEE+ + + + L ++YN ++ Y G++E ++K +++ PD TYN I+
Sbjct: 359 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 418
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
I + L EM D+G + + L++ Y
Sbjct: 419 GLCKAERITNAQDLLMEMQ-DNGVNPTVETFNTLIDAY 455
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 14 FEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNL-SFNALMYNEMMTLYMSV 72
F+ LP K+ E YT LL +Y AE ++ +K+ L S + + N M+TLY
Sbjct: 150 FDNLPADWKSREAYTVLLSMYVRHSMAADAESIYTTLKRWGLRSISPI--NMMLTLYQKH 207
Query: 73 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 132
KVA ++ + + ++ ++N+ + + +++ ++ M +S D
Sbjct: 208 QVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLVEMM--ESKNFLDEHT 265
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSIT---QRQWITYDFLIILYAGLGNKDKIDQIW 189
Y L + Y A + A+ +V + T R TY+ +I++Y +G+ + + +IW
Sbjct: 266 YCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYGFIGDVEGVKRIW 325
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLG--HLKEVGEIIDQWKQSATSDFDISACNRLL 244
++ T+ +YIC++ S +G L E G + +A I+ CN +L
Sbjct: 326 DI--TSRMDPTAEDYICMIRSSAKVGLFELAESGFL----ALAAQRKMHITVCNVML 376
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+ Y K KA+ +F + Q ++ + YN ++ + + + + EE+
Sbjct: 256 TYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEM 315
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++P++ TYN I + I K +DEM D G D + Y +L++ + +H
Sbjct: 316 HCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMH-DRGQPPDIITYSSLLDA-LCKNH 373
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ + L + + Q TY LI G + I++ L + + Y
Sbjct: 374 PGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYT 433
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + G E ++ + +++
Sbjct: 434 VMIHVFCNNGMFGEALAMLSKMEENG 459
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++Y L++ + K T+ A LFE + + N + YN ++ G++ +V+E
Sbjct: 290 QSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDE 349
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+ + PDI TY+ + + D+ L ++ D G + Y L+N
Sbjct: 350 MHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLK-DQGLQPNMYTYTILIN 402
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 15/256 (5%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T T+ +L++ + + +A L + +K L NA+ Y +M +Y G ++ +
Sbjct: 558 SPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE 617
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+K K + P TY + I + + + L++M G + D V Y ++ +
Sbjct: 618 LLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDA-VGLTPDQVSYNTIIQAF 676
Query: 141 ITASHLVNA----ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
A + A + L E + +TY+ LI + G+ D + SL+ K
Sbjct: 677 CKARDMRKAFQLYDKMLLHNLEPT-----SVTYNILINGFCVYGDLKDADNLLVSLQNRK 731
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACN--RLLGAFSDVGLTE 254
+ Y I+ ++ G +V + + ++Q F++S + ++G L
Sbjct: 732 VNLNKYAYTTIIKAHCAKG---DVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVT 788
Query: 255 KANEFHMLLLQKNCAP 270
+A F ++L P
Sbjct: 789 EAKYFFCMMLSDGVCP 804
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A F+ + SNLS + ++YN M+ Y+ G + + +++ K + P I T+N +
Sbjct: 509 QARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ Q ++ LD + G + V Y L+N+Y
Sbjct: 569 YGFCINRKLSQARRLLDTIKL-HGLEPNAVTYTTLMNVY 606
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+++HLY+ E E F + L N + YN ++ Y + G + L EI
Sbjct: 330 TFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEI 389
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ PDI +Y +++ + + ++ D M + + V Y L++ Y +
Sbjct: 390 KQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMK-RNKLKPNLVSYNALIDAYGSNGL 448
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L +A L E E+ Q ++ L+ K KID + + M K+ + Y
Sbjct: 449 LADA-IKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYN 507
Query: 206 CILSSYLMLG 215
+ S + +G
Sbjct: 508 AAIGSCMNVG 517
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ L+A T++A LF +++ + YN ++ + GQ +++
Sbjct: 151 NDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMD 210
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ R + P TYN I++C ++ N + +M+ ++G D V + +++ + +
Sbjct: 211 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-ENGVGPDLVTHNIILSAFKSG 269
Query: 144 SHLVNAESSTLVEAEKSITQRQ-WITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ A S E K R T + +I L DK +I+ S+R K + T
Sbjct: 270 AQYSKALS--YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPD 327
Query: 203 --NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+ I+ Y + G ++ + +I + N L+GA++ G+ +A+ F
Sbjct: 328 VVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKP-NIVSYNALIGAYAARGMDNEAHLFF 386
Query: 261 MLLLQKNCAP 270
+ Q P
Sbjct: 387 NEIKQNGFRP 396
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTA+L Y A+ EKA LFE ++ S++ + + +M + GQ +V + E +
Sbjct: 610 TYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESM 669
Query: 86 KRKNVVPDIFTYNLWISSCA 105
+ K + + +S+C+
Sbjct: 670 REKEIPFSDTIFFEMVSACS 689
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 1662 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1721
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 124
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 1722 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1763
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++ L+H + A+ ++A + E +KQ S + + Y ++ Y + V +++E+
Sbjct: 1592 SFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEM 1651
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ P++ TY + + + + D++ D G + D Y +L+ I A
Sbjct: 1652 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKED-GVAPDASFYNSLIYILGRAGR 1710
Query: 146 LVNAES 151
L +A S
Sbjct: 1711 LEDAYS 1716
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
+ LYA +GNKD++ ++W +L QK + Y+CI+SS + L + I+ +W+ T
Sbjct: 1 MTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDT 59
Query: 233 SDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
S FD N ++ ++ G +KA + L++ P
Sbjct: 60 S-FDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEP 96
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T +TYT+LLH+ + ++A++LF+++ + +A+M+N ++ + S V+ ++
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELL 489
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+++ R V PD T+N + +++ ++ DEM G D + + L++ Y
Sbjct: 490 KDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK-RRGIKPDHISFNTLISGY 546
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 13 YFEGLPLSAKTSE-TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
Y E L K+S T+ ++++ +KA++ ++ S + N + YN ++ Y S
Sbjct: 209 YAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCS 268
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
G+VE ++ +KR+ + PD FTY IS +++ K +EM G V
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAV 327
Query: 132 KYVNLVNIYITASHL 146
Y L++ + +L
Sbjct: 328 IYNTLIDGFCNKGNL 342
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ ++ + E+A ELF+ +K+ + + + +N +++ Y G ++ V E+
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
P + TYN + D ++ L EM G + D Y L+
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM-VSKGMTPDDTTYFTLI 613
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/253 (17%), Positives = 97/253 (38%), Gaps = 38/253 (15%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
L K+S + L+ ++A E F +K+ + N +++L++ + + E
Sbjct: 146 LGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ E+ R + ++T+N+ I+ + + K F+ M
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM------------------ 247
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
E S + +TY+ ++ Y G + D I +++ K +
Sbjct: 248 -------------------ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
S Y ++S G L+E +I ++ Q + N L+ F + G + A+
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV-IYNTLIDGFCNKGNLDMASA 347
Query: 259 FHMLLLQKNCAPT 271
+ +L+K +PT
Sbjct: 348 YKDEMLKKGISPT 360
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 108/221 (48%), Gaps = 11/221 (4%)
Query: 1 MTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
++KV G + GE Y + +P S + Y LL + AE +F ++K +
Sbjct: 204 ISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTF 263
Query: 61 MYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
N+M+ LY V + +K+A V+ ++++N+ P++ TY + I + ++ +I +++ ++ M
Sbjct: 264 TCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETM 322
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILYAGL 179
S G + ++ L+ + ++ L L E E +S+ + + + D L + Y L
Sbjct: 323 K--SEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSV-YGYL 379
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+D++ ++WK + Y +L++ L G + +V
Sbjct: 380 QREDEVRRVWKICEENPR------YNEVLAAILAFGKIDKV 414
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 3 KVFGIHSGERYFEG-LPLSAK-TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNAL 60
K+ + E FE L +S + +S Y+ LL +Y K + ++L +++ S + AL
Sbjct: 410 KIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGAL 469
Query: 61 MYNEMMTLYMSVGQVEKV-ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
++ ++ LY+ G+VEK + + + I+ K + P + ++ + ++ +K
Sbjct: 470 TWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQR 529
Query: 120 MSCDSGGSDDWVKYVNLVNIYITA 143
M S W Y L+ Y+ A
Sbjct: 530 MKQAGYQSRFWA-YQTLIQAYVNA 552
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ A+ A++L ++ + ++ +N ++ Y GQ+EK +V+ E+
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA-- 143
+ + P++ +Y +++ I + LD+M D + + N I A
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF-----HKDVLPNAQVYNAIIDAYV 389
Query: 144 SHLVNAESSTLVEAEKS-ITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKM 199
H N ++ LVE KS +TY+ LI GL N+ +I ++I SL +
Sbjct: 390 EHGPNDQAFILVEKMKSNGISPSIVTYNLLI---KGLCNQSQISEAEEIINSLSNHRLIP 446
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ +Y ++S+ G++ + ++ + + + ++L+ G +
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKS-TVRTYHQLISGLGGAGRLNEMEYL 505
Query: 260 HMLLLQKNCAPTNA 273
+ ++Q N P+NA
Sbjct: 506 YQKMMQNNVVPSNA 519
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 11/249 (4%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T ET+ L+ Y EK + ++++ L N + Y ++ + G++ + +
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 365
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++++ K+V+P+ YN I + DQ +++M + G S V Y L+
Sbjct: 366 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN-GISPSIVTYNLLIKGLC 424
Query: 142 TASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
S + AE E S++ + I +Y+ LI GN DK + + +
Sbjct: 425 NQSQISEAE-----EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
K T R Y ++S G L E+ + + Q+ + + N ++ A+S G KA
Sbjct: 480 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN-AIHNIMVEAYSKYGNEIKAE 538
Query: 258 EFHMLLLQK 266
+ +LQK
Sbjct: 539 DLRKEMLQK 547
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
AEE+ + + + L ++YN ++ Y G++E ++K +++ PD TYN I+
Sbjct: 222 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 281
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
I + L EM D+G + + L++ Y L
Sbjct: 282 GLCKAERITNAQDLLMEMQ-DNGVNPTVETFNTLIDAYGRTGQL 324
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 12/228 (5%)
Query: 51 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNI 110
K L+ N + Y ++ Y +VE+ +V+EE+ + + P++ TYN + +
Sbjct: 283 KCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKL 342
Query: 111 DQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQWITY 169
D++K L+ M D G S D + +++++ A +L E+ + E+ K +Y
Sbjct: 343 DKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNL--DEALKVFESMKKFRIPADSASY 400
Query: 170 DFLIILYAGLGNKDKIDQIW-----KSLRMTK--QKMTSRNYICILSSYLMLGHLKEVGE 222
LI G+ D +Q++ K + ++K K + +Y I S G K+
Sbjct: 401 STLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAER 460
Query: 223 IIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+I Q + T D S ++G + G E E M +L+++ P
Sbjct: 461 VIRQLMKRGTQDPQ-SYTTVIMGHCKE-GAYESGYELLMWMLRRDFLP 506
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE-I 85
+ +L+ YA A +++ +LF+ +K +S + + +N +M++ + G+ V +E +
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVN 138
V PD TYN+ I +D+ +F EM +CD+ D V Y LV+
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDA----DVVTYNTLVD 262
>gi|356533844|ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 813
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY L+ Y A ++A E F ++ + ++ + +N M+ + + GQ+E+V+L+V
Sbjct: 273 SHTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVR 332
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+++ P+ TYN+ IS A +I K+ + M ++ D V Y L+ Y
Sbjct: 333 KMEELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMK-EACLEPDLVSYRTLLYAYSIR 391
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ AE E+ + Q+ T L +Y G D+ +W MTS
Sbjct: 392 KMVGEAEELVKEMDERRLEIDQY-TQSALTRMYIKAGMLDQ-SLLWFLRFHVAGNMTSEC 449
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y + +Y GH E E + W Q + + N ++ A+ EKA
Sbjct: 450 YAASIDAYGEHGHTLE-AEKVFIWSQK-QKNLSVLEFNVMIKAYGIGKCYEKA 500
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++ Y K EKA +LF+ ++Q + + Y ++ + + Q +++++
Sbjct: 484 FNVMIKAYGIGKCYEKACQLFDSMEQHGVVADRCSYTSLIQILTTSDQPHMAKPYLKKMQ 543
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+V D Y + I S A ++ + EM G D + Y L+N++ A +
Sbjct: 544 EAGLVSDCIPYCVVICSFAKLGQLEMAEDIYWEM-IRHGVQPDVIVYSILINVFSDAGRV 602
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
A S + E +K+ + Y+ LI LYA + N +K + +K L+++++ + C
Sbjct: 603 KEA-ISYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAQEAYKLLQLSEEGPNVYSSNC 661
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSD 234
++ Y+ + + +I D K++ ++
Sbjct: 662 MIDLYVKQSMVGQAKQIFDTLKKNGGAN 689
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 108/254 (42%), Gaps = 39/254 (15%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+YT+L+ + + A+ ++++++ L + + Y ++ + +GQ+E + E+
Sbjct: 518 SYTSLIQILTTSDQPHMAKPYLKKMQEAGLVSDCIPYCVVICSFAKLGQLEMAEDIYWEM 577
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
R V PD+ Y++ I+ + + + ++DEM +G + V Y +L+ +Y +
Sbjct: 578 IRHGVQPDVIVYSILINVFSDAGRVKEAISYVDEMK-KAGLPGNTVIYNSLIKLYAKIDN 636
Query: 146 LVNAESS--------------------TLVEAEKSITQRQWI-------------TYDFL 172
L A+ + L + + Q + I T+ +
Sbjct: 637 LEKAQEAYKLLQLSEEGPNVYSSNCMIDLYVKQSMVGQAKQIFDTLKKNGGANEFTFAMM 696
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
+ LY + D+ QI K +R +T +Y +L Y + G KE I+ +K+
Sbjct: 697 LCLYKKIERFDEAIQIAKQIRKLG-PLTELSYNNVLDLYAIAGRPKEA---IETFKEMVR 752
Query: 233 SDFDISACN-RLLG 245
+ ++ C+ R LG
Sbjct: 753 ASIQVNDCSLRSLG 766
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-----------------ERVKQSNLSFNALMYNEMMTL 68
T ++ LY A +KAEE F ERV +N SF + YN ++
Sbjct: 223 TMVIVVQLYKKAGEFQKAEEFFKKWSLGNDNAMATLELDERVVCANASFGSHTYNTLIDT 282
Query: 69 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSC 122
Y GQ+++ + ++ ++ V P T+N I+ C +++V + ++E+ C
Sbjct: 283 YGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVRKMEELRC 339
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ E+ ++LF ++ + ++ N Y ++ + +G + + E++
Sbjct: 188 VYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM 247
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K +VP+++TYN I C ++ + DEM + G + + V Y L+
Sbjct: 248 KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR-ERGVACNVVTYNTLIGGLCQERR 306
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ AE + ++ I+Y+ LI Y +GN DK ++ ++ + Q + Y
Sbjct: 307 VLEAE-RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYN 365
Query: 206 CILSSY 211
+++ +
Sbjct: 366 ILIAGF 371
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 9/204 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + +AE L R+K+ LS N + YN ++ Y S+G ++K + + ++
Sbjct: 293 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 352
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P + TYN+ I+ + N V + EM G S V Y L++ + + +
Sbjct: 353 KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA-RGLSPSKVTYTILMDALVRSDN 411
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A EK+ Y LI +G+ + +++KSL K Y
Sbjct: 412 IEKA-FQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 470
Query: 206 CIL-------SSYLMLGHLKEVGE 222
++ SSY L LKE+GE
Sbjct: 471 TMIYGYCKEGSSYRALRLLKEMGE 494
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 101/221 (45%), Gaps = 9/221 (4%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALM 61
+K I + + F+G+ S + T+ AL+ YA EK EL +++++ N
Sbjct: 315 SKCQDIVAAQMAFDGV--SERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYT 372
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
+N ++ Y+ Q + + E++ N+ PDI+T + +++C+ I + K+ + S
Sbjct: 373 WNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQ-VHAYS 431
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+G D LV++Y + I+ ++++ ++ YA G+
Sbjct: 432 IRAGHDSDVHIGAALVDMYAKC-----GDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGH 486
Query: 182 KDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
++ +++ + +K + ++ +LSS + G L E+G
Sbjct: 487 GEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSL-EIGH 526
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
S K++ +Y A++ Y KA+ELF+R++Q + + + +N M++ Y+ ++
Sbjct: 194 FSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEA 253
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+ ++ ++ + PD FT ++ CA +I + K+ ++ G + + LV
Sbjct: 254 YSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKE-AHSLAIVRGLQSNSIVGGALVE 312
Query: 139 IYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
+Y +V A+ A +++R T++ LI YA +KI ++ + +R +
Sbjct: 313 MYSKCQDIVAAQM-----AFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFE 367
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
+ I++ Y+ ++ + Q A DI +L A S + ++ +
Sbjct: 368 PNVYTWNGIIAGYVENKQYDSAMQLFTEM-QIANLRPDIYTVGIILAACSRLATIQRGKQ 426
Query: 259 FH 260
H
Sbjct: 427 VH 428
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TYTAL++ L ++W++ A L + +K+ ++ N + Y+ ++ ++ G+V + + EE
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ R ++ PDI TY+ I+ ID+ + D M G D V Y L+N + A
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV-SKGCLADVVSYNTLINGFCKAK 344
Query: 145 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ + ++ + ++QR +TY+ LI + G+ DK + + +
Sbjct: 345 RVEDG-----MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L++ + AK E +LF + Q L N + YN ++ + G V+K ++
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 86 KRKNVVPDIFTYNLWI 101
+ PDI+TYN+ +
Sbjct: 392 DFFGISPDIWTYNILL 407
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 92/236 (38%), Gaps = 15/236 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y A++ K A + F+ +++ + N + Y ++ + + A ++ ++
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITA 143
+K + P++ TY+ + + + + K+ +E MS D D V Y +L+N
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP----DIVTYSSLINGLCLH 308
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A + K ++Y+ LI G +++ K R Q+ N
Sbjct: 309 DRIDEANQMFDLMVSKGCLA-DVVSYNTLI---NGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 204 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y ++ + G + + E Q S DI N LLG D G EKA
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP-DIWTYNILLGGLCDNGELEKA 419
>gi|357442727|ref|XP_003591641.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|92882355|gb|ABE86686.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355480689|gb|AES61892.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 3/200 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY L+ Y A ++A E F ++ + + + +N M+ + + G++E+V+ ++
Sbjct: 285 SHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIHICGNHGRLEEVSSLLR 344
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ PD TYN IS +ID K+ M +S D V Y L+ Y
Sbjct: 345 KMGELRCSPDTRTYNTLISLHTKHNDIDMATKYFKRMK-ESYLEPDPVSYRTLLYAYSIR 403
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ AE EK + Q+ T L +Y G ++ +W MTS
Sbjct: 404 KMVCEAEELITEMDEKGLEIDQF-TQSALTRMYIEAGMPER-SLLWFQRFHRAGNMTSEC 461
Query: 204 YICILSSYLMLGHLKEVGEI 223
Y + +Y GH+ E ++
Sbjct: 462 YAANIDAYGERGHISEAEKV 481
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 37/248 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y++L+ + A A A+ +R++ + L N + Y +++ ++ +GQ+E V +E+
Sbjct: 530 SYSSLIQVLASADQPHIAKPYLKRMQVAGLVTNCIPYCAVISCFVKLGQLEMAEGVYKEM 589
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V PDI Y + I++ + + + +E+ +G + V Y +L+ +Y +
Sbjct: 590 IGHGVKPDIIVYGVLINALYGAGRVKEAISYANEIK-RAGLPGNTVIYNSLIKLYTKVGN 648
Query: 146 LVNAESS--------------------------TLVEAEKSITQR-------QWITYDFL 172
L A+ + ++VE K I + ++ +
Sbjct: 649 LREAQETYRLLQSSEEGPAVYSSNCMIGLYTKQSMVEQAKEIFETLKKNGTANEFSFAMM 708
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSAT 232
+ LY + D QI +R + S +Y +L Y G KE EI +K T
Sbjct: 709 LCLYKNIERFDVAIQIANQMRKLELLTDSLSYNIVLDLYATAGRPKEAIEI---FKDMVT 765
Query: 233 SDFDISAC 240
+ + C
Sbjct: 766 ASIQLDDC 773
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 27/197 (13%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A E ER SN SF + YN ++ Y GQ ++ + ++ ++ + P T+N I
Sbjct: 269 APESVERALFSNASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPPTTVTFNTMIH 328
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
C +++V L +M + S D Y L++++ T + ++ + ++S
Sbjct: 329 ICGNHGRLEEVSSLLRKMG-ELRCSPDTRTYNTLISLH-TKHNDIDMATKYFKRMKESYL 386
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGE 222
+ ++Y L+ Y + R +C + ++ + E G
Sbjct: 387 EPDPVSYRTLLYAY-----------------------SIRKMVC--EAEELITEMDEKGL 421
Query: 223 IIDQWKQSATSDFDISA 239
IDQ+ QSA + I A
Sbjct: 422 EIDQFTQSALTRMYIEA 438
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ E+ ++LF ++ + ++ N Y ++ + +G + + E++
Sbjct: 201 VYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM 260
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K +VP+++TYN I C ++ + DEM + G + + V Y L+
Sbjct: 261 KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR-ERGVACNVVTYNTLIGGLCQERR 319
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ AE + ++ I+Y+ LI Y +GN DK ++ ++ + Q + Y
Sbjct: 320 VLEAE-RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYN 378
Query: 206 CILSSY 211
+++ +
Sbjct: 379 ILIAGF 384
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 9/204 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + +AE L R+K+ LS N + YN ++ Y S+G ++K + + ++
Sbjct: 306 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 365
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K P + TYN+ I+ + N V + EM G S V Y L++ + + +
Sbjct: 366 KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA-RGLSPSKVTYTILMDALVRSDN 424
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A EK+ Y LI +G+ + +++KSL K Y
Sbjct: 425 IEKA-FQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 483
Query: 206 CIL-------SSYLMLGHLKEVGE 222
++ SSY L LKE+GE
Sbjct: 484 TMIYGYCKEGSSYRALRLLKEMGE 507
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 5/249 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ + + A LF+ +K++ L A +Y ++ +Y + +VEK V++E+
Sbjct: 236 TYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEM 295
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K K +FTY WI +D + +M D G D V +L+NI
Sbjct: 296 KDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKD-GCKPDVVLINSLINILGKVGR 354
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI-ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L + E + +TY+ +I L+ + ++ ++ +S Y
Sbjct: 355 L-EVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTY 413
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
++ + +++ ++++ + + C+ L+ + V E ANE L L
Sbjct: 414 SILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCS-LINSLGKVKRYEAANEL-FLEL 471
Query: 265 QKNCAPTNA 273
++NC ++A
Sbjct: 472 KENCGHSSA 480
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P Y +L++ K E A ELF +K++ +A +Y M+ + G+
Sbjct: 439 KGFP---PCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGR 495
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
+ + + E+++ PD++ YN +S ID+ + L M ++G S D +
Sbjct: 496 LSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMD-ENGCSPDLNSH- 553
Query: 135 NLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI--ILYAGL 179
N++ + + + + + + SI + ++Y+ ++ + +AGL
Sbjct: 554 NIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGL 600
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 18 PLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
P+ T + ++ + AK KA +F ++K A YN M+ + M GQ EK
Sbjct: 153 PICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEK 212
Query: 78 VALVVEEIKRK-NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
V + E+ + + PD TY+ IS+ D + L+EM D+G Y L
Sbjct: 213 VHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMK-DNGMQPTTKIYTML 271
Query: 137 VNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
V ++ + V+ S E + TY LI GLG +ID+ +
Sbjct: 272 VALFFKLND-VHGALSLFEEMRHQYCRPDVFTYTELI---RGLGKAGRIDEAY 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ + + A +L +K + + +Y ++ L+ + V + EE+
Sbjct: 232 TYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEM 291
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + PD+FTY I ID+ F EM G D + N++N A
Sbjct: 292 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQ-REGCRPDTIVMNNMINFLGKAGR 350
Query: 146 LVNA 149
L +A
Sbjct: 351 LDDA 354
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY ++ L+ + FER+K+S +S ++ Y+ ++ + ++EK +++EE
Sbjct: 372 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEE 431
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ K P Y I + D + E+ + G S V Y ++ A
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRV-YAVMIKHLGKAG 490
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
L +A + E K Y+ L+ +GL +D+ ++R +M
Sbjct: 491 RLDDA-INMFDEMNKLGCAPDVYAYNALM---SGLARTGMLDEALSTMR----RMQEHGC 542
Query: 205 ICILSSY-LMLGHLKEVGEIIDQWK 228
I ++SY ++L L++ ++I QW+
Sbjct: 543 IPDINSYNIILNGLQKQEDLIVQWR 567
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 100/249 (40%), Gaps = 10/249 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ A ++A F +++ + ++ N M+ G+++ + +E+
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEM 361
Query: 86 KRKNVVPDIFTYNLWISSC-AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+P + TYN I + + +V + + M +SG S Y L++ + +
Sbjct: 362 GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMK-ESGISPSSFTYSILIDGFCKTN 420
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID---QIWKSLRMTKQKMTS 201
+ A L E ++ Y LI LG + D ++++ L+ +S
Sbjct: 421 RMEKA-MMLLEEMDEKGFPPCPAAYCSLI---DALGKAKRYDLACELFQELKENCGSSSS 476
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHM 261
R Y ++ G L + + D+ + + D+ A N L+ + G+ ++A
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAP-DVYAYNALMSGLARTGMLDEALSTMR 535
Query: 262 LLLQKNCAP 270
+ + C P
Sbjct: 536 RMQEHGCIP 544
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G P Y +L+ AK + A ELF+ +K++ S ++ +Y M+ G+
Sbjct: 435 KGFP---PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGR 491
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYV 134
++ + +E+ + PD++ YN +S A T +D+ + M + G D Y
Sbjct: 492 LDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQ-EHGCIPDINSYN 550
Query: 135 NLVN 138
++N
Sbjct: 551 IILN 554
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 2/167 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y LL ++A + + + +A Y+ + Y V V++++
Sbjct: 250 AYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKM 309
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R N++P++FTYN I +++ + LDEM D W N + Y
Sbjct: 310 RRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWS--YNAIQAYHCDHC 367
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
VN + EK + TY+ ++ L +G DK ++W+ +
Sbjct: 368 EVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECM 414
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H A T +A + F+++K+ ++ +A YN ++ + G++E VVEE+
Sbjct: 1621 TYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEM 1680
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFL---DEMSCDS 124
+ + P++ T+N IS+ + K L +E SC+
Sbjct: 1681 RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1722
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
++ L+H + A+ ++A + E +KQ S + + Y ++ Y + V +++E+
Sbjct: 1551 SFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEM 1610
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ P++ TY + + + + D++ D G + D Y +L+ I A
Sbjct: 1611 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKED-GVAPDASFYNSLIYILGRAGR 1669
Query: 146 LVNAES 151
L +A S
Sbjct: 1670 LEDAYS 1675
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+ A+ +F + S +A Y ++ Y +GQ+E+ ++ E++R V PD+ TYN++
Sbjct: 593 DHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVF 652
Query: 101 ISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA 157
I+ C +D+ L M SC+ W+ + + + + +H V+
Sbjct: 653 INGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDT-------- 704
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKM--TSRNYICILSSYLML 214
+G+ N ++D +W+ L RM K + T+ Y I++ +
Sbjct: 705 -------------------SGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKA 745
Query: 215 GHLKEVGEIIDQWK 228
L+E + D +
Sbjct: 746 TRLEEACVLFDHMR 759
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 106/275 (38%), Gaps = 14/275 (5%)
Query: 4 VFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNL 55
++G+ ++ + + L K E TYT L+ + A LFE ++Q+ L
Sbjct: 411 IYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 470
Query: 56 SFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKK 115
+ + YN + G+ E+ + RK VV TY + + N D
Sbjct: 471 TPDEQAYNVLTHALCKSGRAEE---AYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 527
Query: 116 FLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIIL 175
+++M + G D Y L+ L N S L + S + + Y +I
Sbjct: 528 LIEKMV-NEGCKADSYTYSVLLQALCKQKKL-NEALSILDQMTLSGVKCNIVAYTIIISE 585
Query: 176 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF 235
G D ++ + + K ++ Y +SSY +G ++E +I + ++ +
Sbjct: 586 MIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAP- 644
Query: 236 DISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
D+ N + +G ++A ++ +C P
Sbjct: 645 DVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEP 679
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 12/259 (4%)
Query: 17 LPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+PL + +YT L+ + +A L + Q S N Y ++ G+
Sbjct: 151 MPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGR 210
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQ--VKKFLDEMSCDSGGSDDWV 131
+ V+EE+ + VVP ++TYN I C + D +K ++ C+ DDW
Sbjct: 211 IHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCN---PDDWT 267
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
N++ IY + L +A IT+ +I Y D ++ S
Sbjct: 268 --YNIL-IYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTS 324
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+ + K+ + Y +++ + KE E + + + + ++ ++ + VG
Sbjct: 325 MLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAP-NVVIYTSIIDGYCKVG 383
Query: 252 LTEKANEFHMLLLQKNCAP 270
A E L+ + C P
Sbjct: 384 KVGAALEVFRLMEHEGCRP 402
>gi|147788269|emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ K +A L E + ++ + +YN +M Y + + + V +++
Sbjct: 241 TYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKM 300
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + V PD+ TYN I + + + + +KFLD M+ + G D V Y +L+N +
Sbjct: 301 KEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMA-EMGHFPDAVTYTSLMNGLCREGN 359
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A + L E E TY+ L+ L ++ +++ ++ K+ +Y
Sbjct: 360 ALGA-LALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYA 418
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISA 239
+ + G + E E D +S + D D++A
Sbjct: 419 TFVRALCKEGRVAEAYEAFDYVVESKSFD-DVTA 451
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 79/217 (36%), Gaps = 28/217 (12%)
Query: 71 SVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDW 130
S G+ E +V+E+ K+ PD FTYN I T + V F+DE+ D
Sbjct: 180 SAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDL 239
Query: 131 VKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWK 190
V Y L++ +L A V E ++ Y+ ++ Y L + ++K
Sbjct: 240 VTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYV-YNTIMKGYCILDKGSEAIGVYK 298
Query: 191 SLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
++ + Y ++ G +KE + +D + +G F D
Sbjct: 299 KMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAE--------------MGHFPDA 344
Query: 251 --------GLTEKANEFHMLLL-----QKNCAPTNAS 274
GL + N L L K C+P + +
Sbjct: 345 VTYTSLMNGLCREGNALGALALLEEMEAKGCSPNSCT 381
>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 103/252 (40%), Gaps = 23/252 (9%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L++ + + ELFE+++ + N YN M+ + + G++ K + +E+
Sbjct: 224 TYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEM 283
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYIT 142
++ VV ++ TYN IS I + +K +D+M +GG +WV +LV
Sbjct: 284 CKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGG--NWVDVTDLVR---- 337
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
E E+ +TY L + LG+ +K + S+
Sbjct: 338 -------------EMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVH 384
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y +L + G++KE ++ + ++ N ++ + G + +A F
Sbjct: 385 IYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEV-VYNTMINGYCKAGNSFRALRFLKE 443
Query: 263 LLQKNCAPTNAS 274
+ K P AS
Sbjct: 444 MEDKRLVPNVAS 455
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A + TY ++ E + LF ++++ LS + + YN ++ Y VG +E+VA
Sbjct: 286 APSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVAS 345
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ E+K VPDI TYN I+ + + ++ EM ++G + V Y L++ +
Sbjct: 346 LFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMK-NNGLKPNVVTYSTLIDAF 404
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ--- 197
+ A V+ ++ TY LI GN + + WK L Q
Sbjct: 405 CKEGMMQGA-IKLFVDMRRTGLLPNEFTYTSLIDANCKAGN---LTEAWKLLNDMLQAGV 460
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
K+ Y +L G + E E+ + S
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 496
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 7/259 (2%)
Query: 12 RYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
R F LP + + LLH + + + + F + + ++ + YN M+
Sbjct: 246 RNFRTLP----KARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCK 301
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
G +E + +++ + PD+ TYN I ++++V +EM D G D +
Sbjct: 302 EGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK-DVGCVPDII 360
Query: 132 KYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS 191
Y L+N Y + A E + + + +TY LI + G +++
Sbjct: 361 TYNGLINCYCKFEKMPRA-FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVD 419
Query: 192 LRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
+R T Y ++ + G+L E ++++ Q+ +I LL G
Sbjct: 420 MRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK-LNIVTYTALLDGLCKAG 478
Query: 252 LTEKANEFHMLLLQKNCAP 270
+A E +L+ +P
Sbjct: 479 RMIEAEEVFRSMLKDGISP 497
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 104/253 (41%), Gaps = 9/253 (3%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ + YTAL+H Y A+ E A ++ +++ + N+ + ++Y ++ + S ++E+ L
Sbjct: 496 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++EE+K + + + I + F EM D G V Y L++
Sbjct: 556 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ-DVGVEATIVTYCVLIDGL 614
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL-RMTKQKM 199
A +V Q Y LI GL + I+ K M + M
Sbjct: 615 CKAG-IVELAVDYFCRMLSLGLQPNVAVYTSLI---DGLCKNNCIESAKKLFDEMQCRGM 670
Query: 200 TS--RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
T + ++ L G+L+E +I + + A +FD+ L+ FS G +A
Sbjct: 671 TPDITAFTALIDGNLKHGNLQEALVLISRMTELAI-EFDLHVYTSLVSGFSQCGELHQAR 729
Query: 258 EFHMLLLQKNCAP 270
+F +++K P
Sbjct: 730 KFFNEMIEKGILP 742
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/256 (17%), Positives = 105/256 (41%), Gaps = 6/256 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A+ E + ++ Y+ A A ++ ++++ + N L+ N + + + ++EK
Sbjct: 168 ARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALR 227
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+E ++ + P++ TYN I ++ + + EM G D V Y ++
Sbjct: 228 FLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPF-KGCPPDKVSYYTVMGFL 286
Query: 141 ITASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
+ + +V+ K + +TY+ L+ + + G+ D+ + + +
Sbjct: 287 CQDKRIKEVRNLMEKMVKDNKLFPDQ--VTYNTLVHMLSKHGHADEALEFLRETEERGFQ 344
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
+ Y I++S+ M G + EI+++ S D+ ++ VG E+A +
Sbjct: 345 VDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSP-DVVTYTAVVNGLCKVGKVEEAKK 403
Query: 259 FHMLLLQKNCAPTNAS 274
+ + C P S
Sbjct: 404 MLQQMYKHGCKPNTVS 419
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+H+ + ++A E ++ + + Y+ ++ + G++++ +V E+
Sbjct: 314 TYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEM 373
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
K PD+ TY ++ +++ KK L +M G + V Y L+N
Sbjct: 374 ITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMY-KHGCKPNTVSYTALLN 425
>gi|302775226|ref|XP_002971030.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
gi|300161012|gb|EFJ27628.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
Length = 846
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 7 IHSGERYFEGLPLSA-KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
IHS + +GL L++ T TA++ YA E+A E+FER++ L + + + M
Sbjct: 120 IHS-RIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAM 178
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
MT Y +G + L+ ++ + + PD F + I +C++ +++Q + S
Sbjct: 179 MTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSV 238
Query: 126 GSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
D V L+N Y A LV+ ES +L S+ + +T+ ++ YA G+ +
Sbjct: 239 ECDGVVGNA-LLNFYAKAG-LVH-ESRSLF---SSMKVKNVVTWSAIVAAYAQNGHHEPA 292
Query: 186 DQIWKSL 192
++++ +
Sbjct: 293 VELFREM 299
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ALL A+ L+ER+ ++ S + + YN ++ + VG++++ + +
Sbjct: 87 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGA 146
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
++ VPD+ TYN I+ +D+ ++ L M +S D V Y +LVN
Sbjct: 147 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES-LVPDVVTYNSLVN 198
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 104/250 (41%), Gaps = 10/250 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ +A ELF + + L +A+ Y + G+VE L+++++
Sbjct: 295 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 354
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K VPD+ ++N I+ +D+ + L M G S + + + L+ A
Sbjct: 355 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA-KGCSPNAISFNTLICGQCRAGK 413
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A +T E K + +TY+ IL GL + +I +++ + +
Sbjct: 414 WKKA-MTTFKEMLKRGVKPTVVTYN---ILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 469
Query: 206 CILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+++ ++ L + G++ D + ++ ++ N L+ + ++A E
Sbjct: 470 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELF 529
Query: 261 MLLLQKNCAP 270
+ +++K C P
Sbjct: 530 VAMVEKGCVP 539
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/113 (18%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LLH + ++A ++F+ + + + YN ++ + ++++ +++ +
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+++VPD+ TYN ++ +D+ + + D G S + + Y L++
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEARMLI----VDKGFSPNVITYSTLIS 230
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ + A ++A+ + +R+ +L + + YN ++ G+V++ +++ +
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD- 215
Query: 86 KRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
K P++ TY+ IS C ++ ++ L++M + G D V Y L++
Sbjct: 216 --KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN-GCKPDIVSYNALIH 266
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
Query: 43 AEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWIS 102
A+ +F+ +++ N + YN +++ + G++ + E + + PD+ TYN +
Sbjct: 69 AQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLH 128
Query: 103 SCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT 162
+D+ K D + G D V Y L+N + A L A+ +S+
Sbjct: 129 GFCKVGKLDEALKIFDG-AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187
Query: 163 QRQWITYDFLIILYAGLGNKDKIDQ 187
+TY+ L+ GL ++D+
Sbjct: 188 P-DVVTYNSLV---NGLCKNGRVDE 208
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 7/238 (2%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ +TY+ L+ Y A E A + + ++ SN+ NA +++ +++ Y G+ +K
Sbjct: 372 SPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQ 431
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V+ E++ V PD YN+ I + +D D M G D V + L++ +
Sbjct: 432 VLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRM-LSEGIEPDTVTWNTLIDCH 490
Query: 141 ITASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
A AE ++E S T++ +I + D + + +R
Sbjct: 491 CRAGKHDRAEELFEEMMEGGYSPCN---TTFNIMINSFGDQERWDDVKNLLAHMRSQGLV 547
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
S Y ++ Y G + E +D K + + N L+ A++ GL+E+A
Sbjct: 548 PNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKP-SSTMYNALINAYAQRGLSEQA 604
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G LS KT+ T A++ T +AE +FE ++ + L YN ++ Y+ G
Sbjct: 297 QGSGLSVKTA-TLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGL 355
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
++ VV E++R V P+ TY+ I + + + L EM + + +V
Sbjct: 356 LKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYV 412
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 102/236 (43%), Gaps = 11/236 (4%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY+ L+ Y A+ E A + + ++ SN+ NA +++ ++ Y G+ +K V+ E
Sbjct: 377 QTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLRE 436
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ V PD YN+ I + +D D M G D + + LV+ + A
Sbjct: 437 MEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRM-LSEGIEPDTITWNTLVDCHCKAG 495
Query: 145 HLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
AE E + + ++ ++ T++ +I + D + + ++R
Sbjct: 496 KHDRAE-----ELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPN 550
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ Y ++ Y G + E +D K + + N LL A++ GL+++A
Sbjct: 551 AVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKP-SSTMYNALLNAYAQRGLSDQA 605
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
+G LS KT+ T + L TE+AE +FE ++ + L YN ++ Y+ G
Sbjct: 298 QGSGLSVKTATLVTVIWGL-GNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGL 356
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
+ VV E++R V+P+ TY+L I + + + L EM + + +V
Sbjct: 357 LRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYV 413
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 30/258 (11%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ A E+A LFE + NL + + + ++ GQVE +++ +
Sbjct: 569 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 628
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V P++ TYN + + I++ +FL+EM SG D + Y +LV AS
Sbjct: 629 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV-SSGCVPDSITYGSLVYALCRASR 687
Query: 146 LVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK-----QKM 199
+A LV KS +TY+ L +D +WKS + + ++M
Sbjct: 688 TDDALQ--LVSELKSFGWDPDTVTYNIL------------VDGLWKSGQTEQAITVLEEM 733
Query: 200 TSRNYICILSSY-LMLGHLKEVGEIIDQWKQSATSDFDISAC--------NRLLGAFSDV 250
+ + + +Y ++ L + G++ + + +S C + L+ V
Sbjct: 734 VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKV 793
Query: 251 GLTEKANEFHMLLLQKNC 268
G ++A E +++K+C
Sbjct: 794 GRIDEARELIQEMMRKSC 811
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY +L++ A T+ A +L +K + + YN ++ GQ E+ V+E
Sbjct: 672 SITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLE 731
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
E+ K PD+ TYN I S ++++ ++ +MS
Sbjct: 732 EMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+ I GE +G+ A T TY +++ + ELFE + + + + Y
Sbjct: 198 RALEIFRGEMARDGV---APTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTY 254
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM-- 120
N ++ G +E+ + ++ ++ VP++ TY++ I+ ID+ ++ + EM
Sbjct: 255 NTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR 314
Query: 121 -SCD 123
SCD
Sbjct: 315 KSCD 318
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 22/254 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNL--SFNALMYNEMMTLYMSVGQVEKVALVVE 83
TY + L T +A EL ++ +L S + + ++ ++ GQ+++ V +
Sbjct: 325 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ VP++ TYN ++ +++ ++ M D G + D + Y LV+ + A
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKA 443
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK-------IDQIWKSLRMTK 196
S + A A + T +T++ +I GL D+ D + +
Sbjct: 444 SRVDEALELLHGMASRGCTP-NVVTFNSII---DGLCKSDRSGEAFQMFDDMALKHGLVP 499
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
K+T Y ++ G + ++D A D D A N + S +G +A
Sbjct: 500 DKIT---YCTLIDGLFRTGRAGQAEALLD-----AMPDPDTYAFNCCINGLSKLGDVSRA 551
Query: 257 NEFHMLLLQKNCAP 270
+ + +L+ P
Sbjct: 552 LQVYNRMLELELVP 565
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNL--SFNALMYNEMMTLYMSVGQVEKVALVVE 83
TY + L +A EL ++ +L S + + ++ ++ GQ ++ V +
Sbjct: 819 TYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFD 878
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ VP++ TYN+ ++ T +++ ++ M D G + D + Y LV+ + A
Sbjct: 879 DMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKA 937
Query: 144 SHLVNA 149
SH+ A
Sbjct: 938 SHVDEA 943
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++ L+ T++A +F+ + N + YN +M ++E+ ++E +
Sbjct: 856 TFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESM 915
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
K V PD+ TY++ + + ++D+ + L M+
Sbjct: 916 VDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T ++HLY+ E + F + L N + YN ++ Y S G ++ V EI
Sbjct: 341 TFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ PD+ +Y +++ + ++ K + M + + V Y L++ Y +
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAYGSKGL 459
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L E E++ Q ++ L+ G K KI + + + K+ + Y
Sbjct: 460 LTEA-VEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 206 CILSSYLMLG 215
+ SYL +G
Sbjct: 519 SAIGSYLSVG 528
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y AL+ YA ++A +F +K++ + + Y ++ Y G+ EK V E +
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R + P++ +YN I + + + + + L EM +G + V L+
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME-RNGVQPNIVSICTLLAACGRCGQ 494
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V + S L AE + Y+ I Y +G DK +++++R K K Y
Sbjct: 495 KVKIK-SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYN 553
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
++S + E +D+
Sbjct: 554 VLISGCCKMSKYGEALGFLDE 574
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 55 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 114
+ N YN + Y+SVG+ +K + ++ K V PD TYN+ IS C +
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEAL 569
Query: 115 KFLDEM 120
FLDEM
Sbjct: 570 GFLDEM 575
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/283 (17%), Positives = 116/283 (40%), Gaps = 38/283 (13%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ L+A ++A LF +++ +A YN ++ + GQ +++
Sbjct: 162 NDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMD 221
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ R + P TYN I++C ++ N + +M+ ++G D V + +++ Y
Sbjct: 222 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-ENGVGPDLVTHNIVLSAYKRG 280
Query: 144 SHL--------------VNAESSTL----------------------VEAEKSITQRQWI 167
+ + +++TL ++ ++S +
Sbjct: 281 NQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVV 340
Query: 168 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 227
T+ +I LY+ G + + ++ K +Y ++ +Y G KE + ++
Sbjct: 341 TFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 228 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
K++ D+ + LL A+ G EKA + L+ + +C P
Sbjct: 401 KKNGFHP-DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTA++H Y A+ EKA LF ++ ++ +++ + +M + GQ KV ++ E +
Sbjct: 621 TYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFM 680
Query: 86 KRKNVVPDIFTYNLWISSCA 105
+ K + + ++ +S+C+
Sbjct: 681 REKKIPFNNSSFFEMVSACS 700
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++H K A +L+ + +S N Y ++ + +G +++ ++ E+K
Sbjct: 204 YTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMK 263
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
KN+ PD++T+N+ I + A ID+ +EM + V Y +L++ HL
Sbjct: 264 LKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK-HKNMFPNIVTYTSLIDGLCKNHHL 322
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
A + E+ I Q +Y L+ G + Q ++ L + + R Y
Sbjct: 323 ERAIALCKKMKEQGI-QPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTY 379
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+H + ++A L +K N++ + +N ++ G++++ + EE+
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K KN+ P+I TY I ++++ +M + G + Y L++
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMK-EQGIQPNVYSYTILLDALCKGGR 356
Query: 146 LVNAE 150
L NA+
Sbjct: 357 LENAK 361
>gi|291228151|ref|XP_002734047.1| PREDICTED: leucine-rich PPR-motif containing-like [Saccoglossus
kowalevskii]
Length = 1067
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
+L+ + + TE A +++++ + + N YN M+ +Y+ ++ +E ++
Sbjct: 154 SLMAELSAPERTELAHMIWDKLPELGIKRNTNHYNAMLKVYLQNNHQISLSEFLENMESS 213
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
V P+ TY I +I K L+ M D V + +L+ + A + N
Sbjct: 214 GVEPNRVTYQRIIGLYCQEGDIQGAGKVLEFMKKKDMPITDGV-FNSLITGHARAGDMAN 272
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
AE + S+ + TY L+ YA G+ + I ++ K LR K++++N + +L
Sbjct: 273 AEGMLTIMRNVSL-EPTVDTYTSLMCAYAEKGDIENIREVLKQLRSEDTKLSNKNLMLVL 331
Query: 209 SSYLMLGHLKEVGEIIDQWK 228
S + GH + V EI+ +
Sbjct: 332 HSLVTSGHEEHVSEILSHMQ 351
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ ++L A+ T +A +L + + ++ + MYN + + + QV ++ + + ++
Sbjct: 393 FVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMR 452
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
VVPD+FTYN+ ISS +D+ + +EM D D V Y +++N
Sbjct: 453 ANGVVPDVFTYNIMISSFGRVGLVDKASELFEEME-DGSCKPDVVTYNSMINCL------ 505
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGL----GNKDKID 186
++ L EA Q YD + Y+ L G +K+D
Sbjct: 506 --GKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVD 547
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ + +KA ELFE ++ + + + YN M+ G +++ ++ +++
Sbjct: 462 TYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDM 521
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ K PD+FTY++ I + +D DEM
Sbjct: 522 QEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM 556
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 30/257 (11%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + A T K L E + N + YN ++ V++ ++ ++
Sbjct: 255 TYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKM 314
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P+ FTY++ + + + ++ + LD S G + Y L+ + H
Sbjct: 315 IESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICS----GCLNRPVYSYLIKALCKSGH 370
Query: 146 LVNAESSTLVEAEKSITQRQWIT------YDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
A S+ R W + Y F+ +L A L N +K + L M +K
Sbjct: 371 ASEAH---------SVFCRMWNSHEKGDRYAFVSMLEA-LCNAEKTTEAIDLLHMMPEKG 420
Query: 200 TSRN---YICILSSYLMLGHLKEV---GEIIDQWKQSATSDFDISACNRLLGAFSDVGLT 253
+ + Y I S+ LG LK+V + D + + D+ N ++ +F VGL
Sbjct: 421 ITTDVGMYNMIFSA---LGKLKQVSFMSSLYDTMRANGVVP-DVFTYNIMISSFGRVGLV 476
Query: 254 EKANEFHMLLLQKNCAP 270
+KA+E + +C P
Sbjct: 477 DKASELFEEMEDGSCKP 493
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 43/95 (45%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + ++ K E++E++++ + YN ++ G V++ V E++
Sbjct: 185 TYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDM 244
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K+ PD +TY + I + L+EM
Sbjct: 245 KQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEM 279
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y +LL ++A ++F + + +A Y + Y + V V++ +
Sbjct: 254 AYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRM 313
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR ++VP++FTYN I ++ + L EM + G S D Y ++ + S
Sbjct: 314 KRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMM-ERGVSPDAWSYNTILAYHCEHSE 372
Query: 146 LVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A +++ + + R +Y+ L+ L +G D+ +IW+S M R +
Sbjct: 373 VNRATKLISIMVKDNCLPDRH--SYNMLLKLLVRVGRFDRATEIWES-------MGERGF 423
Query: 205 ICILSSYLMLGH 216
+S+Y ++ H
Sbjct: 424 YPSVSTYSVMIH 435
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 105/248 (42%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L+ +A+++ E + + L YN +M VGQ+E + E +
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + ++F+YN+ I+ ID+ + +EM G V Y L+ +
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMR-PKGLKPSTVTYNTLIGALCQSGR 371
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGL---GNKDKIDQIWKSLRMTKQKMTSR 202
+ A+ VE + T Q++ +L GL G+ ++ +++S++ T+ K
Sbjct: 372 VRTAQ-KLFVEMQ---TCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
+ +L G L+E + D+ ++ D A N L+ + G+ +A +
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEP-DTIAYNILINGLCNKGMLSEAVKLLWQ 486
Query: 263 LLQKNCAP 270
+ +K C P
Sbjct: 487 MEEKGCLP 494
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ Y + A LF+++K L N L Y+ ++ Y G + + E
Sbjct: 447 TYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEF 506
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR + PD+ Y+ I SC ++ L EM+ +G + V Y +L++ Y
Sbjct: 507 KRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMT-QAGIQPNIVTYNSLIDAYGRNGQ 565
Query: 146 LVNAESS 152
+ N E++
Sbjct: 566 VDNVEAA 572
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 105/241 (43%), Gaps = 7/241 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +L+ + + E ++ +F +++ + + YN ++ GQ+E A ++ +
Sbjct: 307 TFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSM 366
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ KN+ P++ TY+ I ++ +M +SG D V Y L++IY
Sbjct: 367 RLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMK-ESGVRPDRVSYNTLIDIYAKLGR 425
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+A ++ + E+ + +TY+ LI Y G ++ ++ Y
Sbjct: 426 FDDALTAC-KDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYS 484
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ +Y G ++ I ++K++ D+ + L+ + GL E A ++LLQ
Sbjct: 485 ALIDAYSKAGMHQDATSIFVEFKRAGLKP-DVVLYSSLIDSCCKCGLVEDA----VVLLQ 539
Query: 266 K 266
+
Sbjct: 540 E 540
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 109/280 (38%), Gaps = 37/280 (13%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL-VVEE 84
Y+A++ Y + +A ++F+ +K++ N + YN ++ G K AL + EE
Sbjct: 236 AYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEE 295
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++++ V PD T+N I+ C+ + ++ EM G D Y L++
Sbjct: 296 MQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQ-RRGIEQDIFTYNTLIDAVCKGG 354
Query: 145 HLVNAES-----------------STLVEA-----------------EKSITQRQWITYD 170
+ A S ST+++ ++S + ++Y+
Sbjct: 355 QMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYN 414
Query: 171 FLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS 230
LI +YA LG D K + K Y ++ +Y G K+ + D+ K
Sbjct: 415 TLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAE 474
Query: 231 ATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
++ + L+ A+S G+ + A + + P
Sbjct: 475 GLVP-NVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKP 513
>gi|356557983|ref|XP_003547289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 707
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T +A+++ YA + +KA L++R +A ++ ++ +Y G ++ + +E+
Sbjct: 242 TCSAMVYAYALSNNVDKAVSLYDRAIAEKWCLDAAAFSALIKMYSMAGNYDRCLKIYQEM 301
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V P++ TYN + + Q K EM +G S D++ Y L+ +Y T +H
Sbjct: 302 KVLGVKPNVVTYNTLLGAMLKAEKHRQAKAIYKEMR-SNGVSPDFITYACLLEVY-TIAH 359
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ-KMTSRNY 204
E + + Y+ L+ +YA +G D+ +I+ + + + S +
Sbjct: 360 YSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQPDSWTF 419
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSA 231
+++ Y G + E ++++ QS
Sbjct: 420 ASLIAIYSRSGKVSEAEGMLNEMIQSG 446
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E Y+ L+ A E A ELFE++ Q L + + YN M+ + VGQV+ ++ E+
Sbjct: 483 ENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEK 542
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ PDI YN + +++V K L +M
Sbjct: 543 MEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 54 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 113
N + Y+ ++ VG+ ++ + EE+K + ++PD+ +Y+ I DQ
Sbjct: 232 NCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQS 291
Query: 114 KKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
K DEM D G D V + L++ + A+ V ++ I ITY+ LI
Sbjct: 292 KHLFDEMV-DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVP-NLITYNSLI 349
Query: 174 ILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATS 233
+ +G+ + +++ S+ + +Y +++ Y +KE + ++ Q S
Sbjct: 350 DGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKS 409
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 109/279 (39%), Gaps = 36/279 (12%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y+ L+H + A ++++ LF+ + + + + ++ ++ G+V + ++E +
Sbjct: 274 SYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM 333
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT--- 142
++ +VP++ TYN I +++ ++ M G D + Y L+N Y
Sbjct: 334 IQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMP-SKGLEPDEISYTTLINGYCKTWK 392
Query: 143 ---ASHLVN--------AESSTLVEAEKSITQRQWI-----------TY------DFLII 174
A +L N +T K + Q+ + TY I
Sbjct: 393 VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGI 452
Query: 175 LYAGLGNKD---KIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
GL D + +++ L+ K+ NY C++ G L+ E+ ++ Q
Sbjct: 453 FLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEG 512
Query: 232 TSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
D+ N ++ F VG + AN + + C P
Sbjct: 513 LQP-DVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTP 550
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ ++A+ELFE +K + + + Y+ ++ + G+ ++ + +E+
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V PD+ T+++ I + + + KK L+ M G + + Y +L++ +
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM-IQRGIVPNLITYNSLIDGFCMVGD 357
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
L +A L K + + I+Y LI
Sbjct: 358 LNSARELFLSMPSKGLEPDE-ISYTTLI 384
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A ELF +K N N Y+ ++ G++E + E++ ++ + PD+ TYN+ I
Sbjct: 465 EAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+D ++M ++G + D + Y L+
Sbjct: 525 HGFCKVGQVDNANILFEKME-ENGCTPDIIAYNTLL 559
>gi|414864365|tpg|DAA42922.1| TPA: hypothetical protein ZEAMMB73_846849 [Zea mays]
Length = 485
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 109/255 (42%), Gaps = 17/255 (6%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S+TY LL + + A LF + L A +Y ++ Y G +E VE
Sbjct: 125 SQTYARLLMMLGKCRQPGPAAGLFREMLSERLRPTADVYTALIGAYGYSGLLEHALAAVE 184
Query: 84 EIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----CDSGGSDDWVKYVNLV 137
++K + PD +T+++ + CA + D + LDEMS C+S V + ++
Sbjct: 185 QMKGAADCKPDGYTFSVLVDCCAKSRRFDLIPAVLDEMSYLGIECNS------VIHNAII 238
Query: 138 NIYITASHLVNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMT 195
+ Y A+ E ST++E+ ++ T + ++ Y G D++++ + ++
Sbjct: 239 DGYGKAAMFEEMEGALSTMLESGSNVP--DIYTMNSVVGAYGNHGRTDEMEKSYSEFQLM 296
Query: 196 KQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEK 255
+ ++ + ++ SY G ++ I K+ S ++ N ++ F G EK
Sbjct: 297 GVEPDTKTFNIMIRSYGKAGMYVKMMSIFRYMKKRFFSPTAVT-FNTVIECFGRAGDIEK 355
Query: 256 ANEFHMLLLQKNCAP 270
+ L+ + P
Sbjct: 356 MEYYFRLMKIQGVKP 370
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T+ T+ ++ + A EK E F +K + N + Y ++ Y G ++KVA
Sbjct: 334 SPTAVTFNTVIECFGRAGDIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGLLDKVAG 393
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNI---DQVKKFLDEMSCDSGGSDDWVKYVNLV 137
V+ + + NVV D +N IS+ A + +I +++ + + E C D + Y ++
Sbjct: 394 VIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEKRCKP----DRITYATMI 449
Query: 138 NIYITASHLVNAESSTLVEAEK 159
Y TA + A +EAE+
Sbjct: 450 QAY-TAHGMDEAAMLLEIEAER 470
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y++L+ + ++A ELFE +++ N + YN +++ G++ ++EE+
Sbjct: 845 VYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM 904
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ VPD+ TYN+ I +D+ + + M + G D + + +L+
Sbjct: 905 EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMK-EKGIVPDVITFTSLIESLGKVDK 963
Query: 146 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
L+ E+ L ++ E+ +TY+ LI + G + I+ +++
Sbjct: 964 LL--EACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKV 1011
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L++ A A E+A E+F +K++N S +A+ YN ++ G+ + + +E+
Sbjct: 359 TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418
Query: 86 KRKNVVPDIFTYNLWIS 102
K + +VP++ TYN+ IS
Sbjct: 419 KDRGLVPNLRTYNIMIS 435
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+ E+A FE + N +Y+ ++ + G V++ + EE+
Sbjct: 810 TYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEM 869
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R+ P+I TYN +S A ++ +K L+EM G D V Y L++
Sbjct: 870 QRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEME-KVGCVPDLVTYNILIDGVGKMGM 928
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI 185
+ AES EK I IT+ LI LG DK+
Sbjct: 929 VDEAESYFKRMKEKGIVP-DVITFTSLI---ESLGKVDKL 964
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
++ Y +L L + A +F ++ Q + +A + + + G+++ A +
Sbjct: 251 STNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPI 310
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS---CDSGGSDDWVKYVNLVNI 139
+E+ + + P + T+ + I + + NID+ KF + M C S + V Y LVN
Sbjct: 311 QEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC----SPNVVTYTTLVNG 366
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
A L A VE +++ I Y+ LI GLG + D + +M
Sbjct: 367 LAKAGRLEEA-CEVFVEMKENNCSPDAIAYNTLI---DGLGKAGEADMACGLFK----EM 418
Query: 200 TSRNYICILSSY-LMLGHLKEVGEIIDQWK 228
R + L +Y +M+ L + G + W+
Sbjct: 419 KDRGLVPNLRTYNIMISVLGKAGRQPEAWQ 448
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 37/204 (18%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y L+ A + A LF+ +K L N YN M+++ G+ + + ++
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG-----------------GSD 128
K + VPD+FTYN I +D+V + EM G G+D
Sbjct: 454 KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513
Query: 129 DWVKYVN-------------LVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLII 174
V+Y + L++ +I H+ E+ L+E +K +TY L+
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHV--DEAVKLLEVMKKHECIPTVVTYTTLV- 570
Query: 175 LYAGLGNKDKIDQIWKSLR-MTKQ 197
GLG ++D+ LR M KQ
Sbjct: 571 --DGLGKAGRLDEAVSLLREMEKQ 592
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 17/251 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L+ + ++A + F +K S N + Y ++ G++E+ V E+
Sbjct: 324 TFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEM 383
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K N PD YN I D EM D G + Y ++++ A
Sbjct: 384 KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK-DRGLVPNLRTYNIMISVLGKAGR 442
Query: 146 LVNAESSTLV-EAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
E+ L + ++ TY+ LI + G DK+ I K +M +
Sbjct: 443 --QPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIK-------EMVEKGG 493
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDF----DISACNRLLGAFSDVGLTEKANEFH 260
CI+S GH + E D+ + + F +I+ N L+ AF G ++A +
Sbjct: 494 ECIISRDSNAGHEGTI-EGADRTVEYPSLGFKSLGEITY-NTLMSAFIHNGHVDEAVKLL 551
Query: 261 MLLLQKNCAPT 271
++ + C PT
Sbjct: 552 EVMKKHECIPT 562
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 110/256 (42%), Gaps = 25/256 (9%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE-- 83
TY+ +++ + ++A ++F R+K+ + L+ N TL S+ + EK+ ++
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGME--PLLGN-YKTLLSSLVKDEKIDFALQIF 691
Query: 84 -EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E++ ++VPD F YN+ ++ + +D+ K +D M K N++ T
Sbjct: 692 NELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM-----------KNQNILPDLFT 740
Query: 143 ASHLVN--AESSTLVEAEKSITQRQWITYDFLIILYAG----LGNKDKIDQIWKSLRMTK 196
+ L++ +S L EA T+ ++ ++ Y LG K+ R
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTE 254
+K + + S LG V E ++ S + ++ + L+ +F G+ +
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860
Query: 255 KANEFHMLLLQKNCAP 270
+A E + ++ C P
Sbjct: 861 RALELFEEMQRRQCPP 876
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TYT L+ A ++A L +++ + + Y+ +M + Q E+ +
Sbjct: 562 TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLF 621
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+E+ RK V D+ TY+L I+ + ++DQ M
Sbjct: 622 DEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRM 659
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 105/269 (39%), Gaps = 8/269 (2%)
Query: 8 HSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEM 65
HS FE + + +YT L+H YA A+ A E ++ +S NA Y+ +
Sbjct: 209 HSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVI 268
Query: 66 MTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG 125
++ Y +G VE + +N + YN I + N+++ + + M + G
Sbjct: 269 ISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAME-EQG 327
Query: 126 GSDDWVKYVNLVNIYI---TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNK 182
Y L++ Y+ +N E ++ ++Y LI LY+ LG
Sbjct: 328 LEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSP-TVVSYGCLINLYSKLGKM 386
Query: 183 DKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNR 242
DK QI + K + Y I+ Y+ LG + + + I+ N
Sbjct: 387 DKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITY-NI 445
Query: 243 LLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
L+ AF G +A E + +C PT
Sbjct: 446 LMNAFCKNGQMNRALELLARMESGDCPPT 474
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 98/235 (41%), Gaps = 10/235 (4%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y ++H Y A E+AE + +++ L +YN +M Y+ V+K V +K
Sbjct: 300 YNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLK 359
Query: 87 RK---NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+ + P + +Y I+ + +D+ + +EM D G + Y +++ Y+
Sbjct: 360 ARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEME-DQGIKHNRKTYSMIIDGYVQL 418
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
NA S + + + ITY+ L+ + G ++ ++ + T R
Sbjct: 419 GDTANA-FSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRT 477
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC--NRLLGAFSDVGLTEKA 256
Y I+ ++ +G L+ E + K + F SA N ++ + G ++A
Sbjct: 478 YTIIIDGFMKIGDLRMAFETVRDMKMAG---FRPSAATYNVIMHGLAQAGQMDRA 529
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 96/236 (40%), Gaps = 3/236 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
T TYT ++ + A E +K + +A YN +M GQ+++ A
Sbjct: 472 PPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAAS 531
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+++E+ V P+ +Y I A ++ K+ + + + G D + Y +L+
Sbjct: 532 IIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIK-EVGLKPDVIAYASLLKAC 590
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A + + + T A + +I Y+ L+ +A G+ + I + +R
Sbjct: 591 CKAGRMQSTLAITAEMAAAGVPMNNYI-YNILLDGWAQRGDMWEASDIMQKMRHEGLTPD 649
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+Y +++ G + + E I+Q KQ ++ A L+ ++ EKA
Sbjct: 650 IHSYTSFINACCKAGDMLKATETIEQMKQQGVQP-NLQAYTTLIHGWASASYPEKA 704
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T +Y L++LY+ +KA ++ ++ + N Y+ ++ Y+ +G
Sbjct: 367 SPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFS 426
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK-YVNLVNI 139
V E++ + PD TYN+ +++ +++ + L M +SG ++ Y +++
Sbjct: 427 VFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARM--ESGDCPPTLRTYTIIIDG 484
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
++ L A T+ + + + + TY+ ++ A G D+ I + +
Sbjct: 485 FMKIGDLRMA-FETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHP 543
Query: 200 TSRNYICILSSYLMLG----------HLKEVG 221
R+Y ++ Y +G +KEVG
Sbjct: 544 NERSYTTLIEGYACIGDMGLAFKYFNRIKEVG 575
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 90/233 (38%), Gaps = 25/233 (10%)
Query: 4 VFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYN 63
V G+H ER +YT L+ YA A + F R+K+ L + + Y
Sbjct: 538 VAGVHPNER-------------SYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYA 584
Query: 64 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
++ G+++ + E+ V + + YN+ + A ++ + + +M
Sbjct: 585 SLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMR-H 643
Query: 124 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 183
G + D Y + +N A ++ A + T+ + ++ Q Y LI +A +
Sbjct: 644 EGLTPDIHSYTSFINACCKAGDMLKA-TETIEQMKQQGVQPNLQAYTTLIHGWASASYPE 702
Query: 184 KIDQIWKSLRMTKQKMTSRNYICILSSYLML----------GHLKEVGEIIDQ 226
K + ++ Y CI++S L G L+ E++DQ
Sbjct: 703 KALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQ 755
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ YA + +LF+ +K S N+ YN ++ Y G ++ + +E+
Sbjct: 90 TYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM 149
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
D+ TYN+ I+ ++ +++ LDEM G D V Y L+++Y S+
Sbjct: 150 DGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDT-KGVPPDQVTYNTLLDVYAKKSY 208
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
V A E W TY+ ++
Sbjct: 209 FVKAHEILREMTEAGYRPNIW-TYNIML 235
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 23 TSETYTALLHLYAGAKWT-EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TYT ++H Y K + A L E +K+S + ++YN ++ ++ G++E +
Sbjct: 16 TVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKI 75
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++++KR V ++ TY I A T + +K EM D G S + Y L+ Y
Sbjct: 76 LDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMK-DKGESPNSWTYNALIQGY 133
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Query: 12 RYFEGLPLSAKTSET--YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLY 69
R E + S K + Y L++ + E AE++ + +K+ +S N + Y ++ Y
Sbjct: 39 RLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEY 98
Query: 70 MSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
+ G+++ + +E+K K P+ +TYN I + + DEM D G
Sbjct: 99 ANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM--DGVGCAK 156
Query: 130 WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
V N+ L+ L E + +TY+ L+ +YA K +I
Sbjct: 157 DVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEIL 216
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
+ + + Y +LSS + E ++ + K +I + +L +
Sbjct: 217 REMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVP-NIVTYSAMLSLYGR 275
Query: 250 VGLTEKANEFHMLLLQKNCAP 270
GL +A + +++ C P
Sbjct: 276 HGLYTEAAKLWDEMIEAGCIP 296
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL +YA + KA E+ + ++ N YN M++ V + + E +
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENL 254
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
K K VVP+I TY+ +S + K DEM ++G + Y L+ Y
Sbjct: 255 KSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEM-IEAGCIPCIIAYSGLIESY 308
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 83/201 (41%), Gaps = 4/201 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
AK TY + +Y E E L + + + + + YN ++ +Y K
Sbjct: 155 AKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHE 214
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ E+ P+I+TYN+ +SS ++ + + + + G + V Y ++++Y
Sbjct: 215 ILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLK-SKGVVPNIVTYSAMLSLY 273
Query: 141 ITASHLVNAESSTL-VEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
H + E++ L E ++ I Y LI Y G + ++ +R +
Sbjct: 274 --GRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVP 331
Query: 200 TSRNYICILSSYLMLGHLKEV 220
++ Y ++ +Y G +E
Sbjct: 332 DTKIYTALMDAYGKAGRCREA 352
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +L+ + EKA +L++ + + ++ N ++YN ++ +G+V K + +EI+
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
K++VPD+ TY+ I + N+ + K DEM G S D Y L++
Sbjct: 724 EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM-ISKGISPDGYIYCILID 774
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 105/248 (42%), Gaps = 8/248 (3%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
Y+A++H + T++A +F + ++ + + +YN +++ + G +EK + + +E
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ + P+I YN I+ + + ++ DE+ + D V Y +++ Y +
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE-EKDLVPDVVTYSTIIDGYCKSG 745
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS--R 202
+L A K I+ +I IL G G + +++ +QK
Sbjct: 746 NLTEAFKLFDEMISKGISPDGYI----YCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 801
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
+ ++ S+ G + E E+ D + +I L+ A+ + E+A + +
Sbjct: 802 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTP-NIVTYTILIDAYGKAEMMEEAEQLFLD 860
Query: 263 LLQKNCAP 270
+ +N P
Sbjct: 861 METRNIIP 868
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 3/245 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ + +KA E+ +++ ++ + N MY ++ Y+ + E +++ +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V+PD+F YN I +++ K L +M + G + Y +N+Y +
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMG-EKGIKPNAHTYGAFINLYSKSGE 571
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ AE I I Y LI + +GN + +K + R Y
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVI-YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
I+ S G KE + ++ ++ D+ N L+ F G EKA++ + +L
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVP-DVFLYNSLISGFCKEGDIEKASQLYDEMLH 689
Query: 266 KNCAP 270
P
Sbjct: 690 NGINP 694
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY A++ A A KA LF + + L + YN ++ Y+ + K ++ E+
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + + P FTY++ IS + ++ + + LD+M +G + Y L+ Y+ S
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGTLIKAYVQESR 501
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ + K +++A+ +FE + S L+ N Y ++ ++ G +E+ + +E+
Sbjct: 313 TYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + ++ TYN I A + + +EM D W Y L++ Y+ SH
Sbjct: 373 ITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT-YNLLIDGYL-KSH 430
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
+ L E + TY LI
Sbjct: 431 DMAKACELLAEMKARKLTPSPFTYSVLI 458
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 92/234 (39%), Gaps = 34/234 (14%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
Y L++ KA ELF+ +++ +L + + Y+ ++ Y G + + + +E+
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS------------------ 127
K + PD + Y + I C N+++ E S GS
Sbjct: 758 ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVI 817
Query: 128 ------DDWVK---------YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 172
DD V Y L++ Y A + AE L ++I +TY L
Sbjct: 818 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT-LTYTSL 876
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
++ Y +GN+ K+ ++K + + Y + S+Y G E +++++
Sbjct: 877 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 110/284 (38%), Gaps = 43/284 (15%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ TY A ++LY+ + + AE F+ + S + N ++Y ++ + VG + +
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615
Query: 84 EIKRKNVVPDI-----------------------------------FTYNLWISSCAATL 108
+ K ++PDI F YN IS
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675
Query: 109 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 168
+I++ + DEM +G + + V Y L+N + A E E+ +T
Sbjct: 676 DIEKASQLYDEM-LHNGINPNIVVYNTLINGLCKLGEVTKAR-ELFDEIEEKDLVPDVVT 733
Query: 169 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI-CIL-SSYLMLGHLKEVGEIIDQ 226
Y +I Y GN + +++ M + ++ YI CIL G+L++ + +
Sbjct: 734 YSTIIDGYCKSGNLTEAFKLFD--EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE 791
Query: 227 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+Q + +SA N L+ +F G +A E ++ K P
Sbjct: 792 AQQKSVG--SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTP 833
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID---QVKKFLD 118
Y ++ + VG V K +V+ E++ K P++FTYN +I T +D +VKK +
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM 303
Query: 119 EMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEA-EKSITQRQWITYDFLIILYA 177
E G D Y LV+ + + E+ + E+ S TY LI +
Sbjct: 304 E----KGLGPDGHTYTLLVDGFCKQKR--SKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357
Query: 178 GLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 223
GN I ++LR+ + +T + +++ M+G + + GE+
Sbjct: 358 KEGN------IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
++S TALL Y ++A ++F + ++ + ++ M+ Y G+ E +
Sbjct: 430 RSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDI----VAWSAMLAGYAQAGETEAAIKI 485
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATL-NIDQVKKF--------LDEMSCDSGGSDDWVK 132
E+ + V P+ FT++ ++ CAAT ++ Q K+F LD C S
Sbjct: 486 FSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSA------ 539
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
L+ +Y H+ +AE E K ++ ++++ +I YA G K ++K +
Sbjct: 540 ---LLTMYAKKGHIESAE-----EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 591
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIID 225
+ K KM S +I + ++ G ++E + D
Sbjct: 592 KKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFD 624
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 12 RYFEGLPLSAKTSETY---TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTL 68
+ F G + ++ + +ALL +YA E AEE+F+R ++ +L + +N M++
Sbjct: 519 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDL----VSWNSMISG 574
Query: 69 YMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD 128
Y GQ K V +E+K++ V D T+ ++C +++ +K+ D M D +
Sbjct: 575 YAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 634
Query: 129 DWVKYVNLVNIYITASHLVNA 149
+V++Y A L A
Sbjct: 635 TKEHNSCMVDLYSRAGQLEKA 655
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T ++HLY+ E + F + L N + YN ++ Y S G ++ V EI
Sbjct: 341 TFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ PD+ +Y +++ + ++ K + M + + V Y L++ Y +
Sbjct: 401 KKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR-RNHCKPNLVSYNALIDAYGSKGL 459
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L E E++ Q ++ L+ G K KI + + + K+ + Y
Sbjct: 460 LTEA-VEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 206 CILSSYLMLG 215
+ SYL +G
Sbjct: 519 SAIGSYLSVG 528
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 2/201 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y AL+ YA ++A +F +K++ + + Y ++ Y G+ EK V E +
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELM 435
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R + P++ +YN I + + + + + L EM +G + V L+
Sbjct: 436 RRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEME-RNGVQPNIVSICTLLAACGRCGQ 494
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V + S L AE + Y+ I Y +G DK +++++R K K Y
Sbjct: 495 KVKIK-SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYN 553
Query: 206 CILSSYLMLGHLKEVGEIIDQ 226
++S + E +D+
Sbjct: 554 VLISGCCKMSKYGEALGFLDE 574
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 55 LSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVK 114
+ N YN + Y+SVG+ +K + ++ K V PD TYN+ IS C +
Sbjct: 510 IKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEAL 569
Query: 115 KFLDEM 120
FLDEM
Sbjct: 570 GFLDEM 575
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/283 (17%), Positives = 116/283 (40%), Gaps = 38/283 (13%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ L+A ++A LF +++ +A YN ++ + GQ +++
Sbjct: 162 NDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMD 221
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ R + P TYN I++C ++ N + +M+ ++G D V + +++ Y
Sbjct: 222 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-ENGVGPDLVTHNIVLSAYKRG 280
Query: 144 SHL--------------VNAESSTL----------------------VEAEKSITQRQWI 167
+ + +++TL ++ ++S +
Sbjct: 281 NQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVV 340
Query: 168 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 227
T+ +I LY+ G + + ++ K +Y ++ +Y G KE + ++
Sbjct: 341 TFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEI 400
Query: 228 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
K++ D+ + LL A+ G EKA + L+ + +C P
Sbjct: 401 KKNGFHP-DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTA++H Y A+ EKA LF ++ ++ +++ + +M + GQ KV ++ E +
Sbjct: 621 TYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFM 680
Query: 86 KRKNVVPDIFTYNLWISSCA 105
+ K + + ++ +S+C+
Sbjct: 681 REKKIPFNNSSFFEMVSACS 700
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 106/253 (41%), Gaps = 13/253 (5%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S+TY LL + + A LF+ + L A +Y ++ Y G +++ VE
Sbjct: 126 SQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVYTALVGAYGYSGLLDEALAAVE 185
Query: 84 EIK-RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----CDSGGSDDWVKYVNLV 137
++K + PD +T+++ I+ CA + D + LDEMS C+S V + ++
Sbjct: 186 QMKGAADCKPDGYTFSVLINCCAKSRRFDLIPAVLDEMSYLGIECNS------VIHNAII 239
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ Y A+ E + E T + +I Y G D++++ + ++
Sbjct: 240 DGYGKAAMFEEMEGALSAMLESGSNVPDIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGV 299
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
+ ++ + ++ SY G ++ I K+ S ++ N ++ F G EK
Sbjct: 300 EPDTKTFNIMIKSYGKAGMYDKMMSIFRYMKKRFFSPTAVT-FNTVIECFGRAGNIEKME 358
Query: 258 EFHMLLLQKNCAP 270
+ L+ + P
Sbjct: 359 YYFRLMKIQGVKP 371
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T+ T+ ++ + A EK E F +K + N + Y ++ Y G ++KV
Sbjct: 335 SPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGLLDKVPG 394
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNI---DQVKKFLDEMSCDSGGSDDWVKYVNLV 137
++ + + NVV D +N IS+ A + +I +++ + + E C D + Y ++
Sbjct: 395 IIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEKKCKP----DKITYATMI 450
Query: 138 NIYITASHLVNAESSTLVEAEK 159
Y TA + A +EAE+
Sbjct: 451 QAY-TAQGMDEAARLLEMEAER 471
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
AK TY ALL Y +A L E +KQ S N L Y+ ++ Y G
Sbjct: 362 AKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 421
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ +++K+ + PD+ Y+ + C + D+ L+EM+ D+G + + Y +L++ Y
Sbjct: 422 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMA-DNGIRPNVITYNSLLDAY 480
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 100/244 (40%), Gaps = 3/244 (1%)
Query: 14 FEGLPLSAKTS-ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 72
FE + + K + Y A++ + A +F + + +S + + +N +++
Sbjct: 178 FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRA 237
Query: 73 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 132
+ E+ + E++ + + D TYN I++ + ++ M+ SG +
Sbjct: 238 NRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVIT 297
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
Y +++ Y L + + E + I Y+ ++ ++A LGN D+ I +++
Sbjct: 298 YSTMIDGYAKLG-LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAM 356
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
Y +L SY G +E ++++ KQ S +I + L+ A+ G
Sbjct: 357 EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASP-NILTYSALIDAYCKHGF 415
Query: 253 TEKA 256
A
Sbjct: 416 HRDA 419
>gi|297820044|ref|XP_002877905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323743|gb|EFH54164.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 439
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 111/280 (39%), Gaps = 33/280 (11%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K+F + + ++E +TYT L + K ++A LFE + L +Y
Sbjct: 79 KIFHLLRKQHWYE------PKCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVY 132
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS 121
++ +Y ++K +E +K + PD+FT+ + I C D VK+ + EMS
Sbjct: 133 TSLIAVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLIRCCCKLGRFDLVKRIILEMS 192
Query: 122 CDSGGSDDWVKYVNLVNIYITASHLVNAE------------------------SSTLVEA 157
G V Y +++ Y A E SS +V
Sbjct: 193 YLGVGCST-VTYNTIIDGYGKAGMFEEMENVLADMIEDGDSLPDVFTLNSIIGSSEMVAH 251
Query: 158 EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHL 217
E+ T++ LI+ + G K+ + + +T+ Y ++ ++ G +
Sbjct: 252 EEDGELPDITTFNILILSFGKAGMYKKMSSVMDFMEKRFFSLTTVTYNIVIETFGKAGKI 311
Query: 218 KEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
+++ ++ + K IS C+ L+ A+S GL K +
Sbjct: 312 EKMDDVFRKMKYQGVKPNSISYCS-LVNAYSKAGLVGKID 350
>gi|224086334|ref|XP_002307852.1| predicted protein [Populus trichocarpa]
gi|222853828|gb|EEE91375.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 66
IH+ + F+G +S E Y +L Y E + +R+K S+ + + YN MM
Sbjct: 522 IHTMQ--FDGFSVSL---EAYNCVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMM 576
Query: 67 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
+Y +G +++VA V+ E++ + PD+ +YN I + ++ + EM +G
Sbjct: 577 NIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAGMVEDAVGLVKEMR-QNGV 635
Query: 127 SDDWVKYVNLV 137
D + Y NL+
Sbjct: 636 EPDKITYTNLI 646
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/227 (17%), Positives = 104/227 (45%), Gaps = 5/227 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERV-KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++ ++ +Y A + A + E + K+ ++ + ++ +M+ +Y G ++K+ + +
Sbjct: 361 AFSIVIRMYVKAGSLKDACSVLETMEKEKDMVPDIYLFRDMLRVYQQCGMMDKLNDLYFK 420
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
I + VV D YN I+ CA L + ++ + +EM G + + + ++++Y A
Sbjct: 421 ILKSGVVWDQELYNCLINCCARALPVGELSRLFNEM-LQRGFDPNTITFNVMLDVYAKAK 479
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
A ++ ++ + I+Y+ +I Y + + +++ ++ Y
Sbjct: 480 LFNKARELFMMARKRGLVDV--ISYNTIIAAYGRKRDFKNMASTIHTMQFDGFSVSLEAY 537
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
C+L +Y G ++ ++ + K S+ + D N ++ + ++G
Sbjct: 538 NCVLDAYGKEGQMESFRSVLQRMKNSSCTA-DHYTYNIMMNIYGELG 583
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 36/182 (19%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNL----SFNALM-------------------- 61
T+ +L +YA AK KA ELF ++ L S+N ++
Sbjct: 467 TFNVMLDVYAKAKLFNKARELFMMARKRGLVDVISYNTIIAAYGRKRDFKNMASTIHTMQ 526
Query: 62 ----------YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNID 111
YN ++ Y GQ+E V++ +K + D +TYN+ ++ ID
Sbjct: 527 FDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSSCTADHYTYNIMMNIYGELGWID 586
Query: 112 QVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDF 171
+V L E+ + G D Y L+ Y A +V + E ++ + ITY
Sbjct: 587 EVAGVLTELR-ECGLGPDLCSYNTLIKAYGIAG-MVEDAVGLVKEMRQNGVEPDKITYTN 644
Query: 172 LI 173
LI
Sbjct: 645 LI 646
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++++Y W ++ + +++ L + YN ++ Y G VE +V+E+
Sbjct: 571 TYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAGMVEDAVGLVKEM 630
Query: 86 KRKNVVPDIFTYNLWISS 103
++ V PD TY I++
Sbjct: 631 RQNGVEPDKITYTNLITT 648
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 6 GIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQSNLSF 57
G+ S + E L L K S TY AL++ + K ++A E+ + + + L+
Sbjct: 343 GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAP 402
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
N + +N ++ Y G+++ L+ + V P++ TYN I N+ + +K
Sbjct: 403 NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLA 462
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNA----ESSTLVEAEKSITQRQWITYDFLI 173
EM +G D V Y LV+ A + TL+ EK + +TY+ LI
Sbjct: 463 KEME-GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLM--EKKGRRANIVTYNVLI 519
Query: 174 ILYAGLGNKDKIDQ 187
G NK K+++
Sbjct: 520 ---KGFCNKGKLEE 530
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 5/243 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ Y A KA+ L + + + N + +N ++ + V V EE+
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEM 325
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R+ + P++ TYN I+ + +D+ D+MS G + V Y L+N +
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS-GMGLKPNVVTYNALINGFCKKKM 384
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L + K IT++ LI Y G D + + T Y
Sbjct: 385 LKEAR-EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF--HMLL 263
C++ + G++KE ++ + + + D+ N L+ A G T KA M L
Sbjct: 444 CLIVGFCREGNVKEARKLAKEMEGNGLKA-DLVTYNILVDALCKKGETRKAVRLLDEMTL 502
Query: 264 LQK 266
++K
Sbjct: 503 MEK 505
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ L+ + + A+++FE +++ L N + YN ++ S G++++ + +++
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P++ TYN I+ + + ++ LD++ G + + + + L++ Y A
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG-KRGLAPNVITFNTLIDAYGKAGR 419
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A + + + TY+ LI+ + GN + ++ K + K Y
Sbjct: 420 MDDAFLLRSMMLDTGVCP-NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYN 478
Query: 206 CILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
++ + G ++ ++D+ + +I N L+ F + G E+AN +
Sbjct: 479 ILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538
Query: 264 LQKNCAPTNAS 274
L+K P +
Sbjct: 539 LEKGLIPNRTT 549
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 94/230 (40%), Gaps = 9/230 (3%)
Query: 44 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 103
E +++ + + + N + ++ ++ VG+ +K VVE++K P + TYN I
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273
Query: 104 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 163
+ + L EM ++ + + L++ + + V A E ++ Q
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNE-ITFNILIDGFCRDEN-VTAAKKVFEEMQRQGLQ 331
Query: 164 RQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+TY+ LI GL + K+D+ + + K Y +++ + LKE
Sbjct: 332 PNVVTYNSLI---NGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Query: 221 GEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
E++D + + ++ N L+ A+ G + A ++L P
Sbjct: 389 REMLDDIGKRGLAP-NVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 53/95 (55%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+TAL++ + AK ++A LF ++ +SNL N + +N ++ Y VG + K + +++
Sbjct: 479 TFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQM 538
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ + PD +TY IS T + K+F+ ++
Sbjct: 539 MCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL 573
>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 811
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++ L+H E+A +LFERV + + + YN ++ Y +G +++ +++ +
Sbjct: 291 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 350
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + V PD+ TY + I+ + ++++ K ++ D G + V Y L+N
Sbjct: 351 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDV-LDQGLQLNIVTYSVLLNALFKKGM 409
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 204
+ + L E I Y LI Y LG +K Q+ ++ +++ M TS N+
Sbjct: 410 FCEID-NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNH 468
Query: 205 ICI 207
I
Sbjct: 469 FSI 471
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T T +LL+ Y + AE F ++ S L A+ Y +M G+V + +
Sbjct: 533 PTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSL 592
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIY 140
+E+ K + + TY++ + L D+ L +M DS G + D + Y L+ +
Sbjct: 593 FDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDM--DSKGINADPITYNTLIQGF 650
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ ++ A + + + +TY+ LI + G + + + +SLR K+
Sbjct: 651 CESENVQMAFHIHDIMLCRGLVPTP-VTYNLLINVLCLKGKVIQAEILLESLRENGIKLR 709
Query: 201 SRNYICILSSYLMLG----HLKEVGEIIDQWKQSATSDFDISACNRL 243
Y ++ + G + VG+++D +++ DF +A NRL
Sbjct: 710 KFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFS-AAINRL 755
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+ Y ++A L ++ Q L+ N + Y + G+V+ ++ E+
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
RK + +I+TYN ++ NIDQ K + +M +G D V Y L++ Y +
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV-AGFHPDAVTYTTLMDAYCKSRE 448
Query: 146 LVNA 149
+V A
Sbjct: 449 MVRA 452
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ L +AE + + ++ + ++Y ++ + +G V + +E+
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+++ + PD TY I T + + K EM C D+ V Y L++ Y
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE-VTYTALIDGYCKEGK 343
Query: 146 LVNAES 151
+ A S
Sbjct: 344 MKEAFS 349
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 7/188 (3%)
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++EE++ K + P+ +TYN I T + + ++ L EM G + D V Y L++ +
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM-ISEGIAPDGVIYTTLIDGF 268
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ V++ E +K +ITY +I G + D+++ + + +
Sbjct: 269 CKLGN-VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y ++ Y G +KE + +Q Q + +I L G + ANE
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP-NIVTYTALADGLCKCGEVDTANE-- 384
Query: 261 MLLLQKNC 268
LL + C
Sbjct: 385 --LLHEMC 390
>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
Length = 818
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++ L+H E+A +LFERV + + + YN ++ Y +G +++ +++ +
Sbjct: 291 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 350
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + V PD+ TY + I+ + ++++ K ++ D G + V Y L+N
Sbjct: 351 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDV-LDQGLQLNIVTYSVLLNALFKKGM 409
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 204
+ + L E I Y LI Y LG +K Q+ ++ +++ M TS N+
Sbjct: 410 FCEID-NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNH 468
Query: 205 ICI 207
I
Sbjct: 469 FSI 471
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 97/223 (43%), Gaps = 9/223 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T +LL+ Y + AE F ++ S L A+ Y +M G+V + + +E+
Sbjct: 537 TCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEM 596
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIYITAS 144
K + + TY++ + L D+ L +M DS G + D + Y L+ + +
Sbjct: 597 VAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDM--DSKGINADPITYNTLIQGFCESE 654
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
++ A + + + +TY+ LI + G + + + +SLR K+ Y
Sbjct: 655 NVQMAFHIHDIMLCRGLVPTP-VTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFAY 713
Query: 205 ICILSSYLMLG----HLKEVGEIIDQWKQSATSDFDISACNRL 243
++ + G + VG+++D +++ DF +A NRL
Sbjct: 714 TTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFS-AAINRL 755
>gi|356528278|ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Glycine max]
Length = 1079
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 4/232 (1%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
A+ L G K E AE + +R + NL + + YN + + G++ + + E +
Sbjct: 758 AVNSLTNGGKHQE-AENIVQRSLEENLELDTVAYNTFIKAMLEAGKLHFASSIFEHMISS 816
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
V P I T+N IS +D+ + ++ S S D+ Y+NL+ Y A ++
Sbjct: 817 GVAPSIETFNTMISVYGQDQKLDRAVEMFNQASSCSVPLDEKT-YMNLIGYYGKAGLMLE 875
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
A S + ++ + ++Y+ +I +YA G + ++++ +++ S Y+ ++
Sbjct: 876 A-SQLFSKMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHTMQRQGYLPDSFTYLSLV 934
Query: 209 SSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
+Y + + E I QS N LL AF GL +A +
Sbjct: 935 QAYTRSLNYSKAEETIHAM-QSKGIPPSCVHFNILLHAFIKAGLIHEAKRVY 985
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
+PL KT Y L+ Y A +A +LF ++++ + + YN M+ +Y + G +
Sbjct: 853 VPLDEKT---YMNLIGYYGKAGLMLEASQLFSKMQEGGIKPGKVSYNIMINVYANAGVLH 909
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
+ + ++R+ +PD FTY + + +LN + ++ + M G V + L
Sbjct: 910 ETEKLFHTMQRQGYLPDSFTYLSLVQAYTRSLNYSKAEETIHAMQ-SKGIPPSCVHFNIL 968
Query: 137 VNIYITA 143
++ +I A
Sbjct: 969 LHAFIKA 975
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 95/237 (40%), Gaps = 39/237 (16%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
N Y ++ ++ G E +E++ VVP+ TY+L I+ A + N D+V++
Sbjct: 300 NNFTYTVAISSFVKEGLHEDAFKTFDEMRNYGVVPEELTYSLLINLNAKSGNRDEVQRLY 359
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAES--STLVEAEKSITQRQWITYDFLIIL 175
++M ++ +L+++Y A S S +V + S + + Y LI +
Sbjct: 360 EDMRFRGIIPSNYT-CASLLSLYYKYEDYPRALSLFSEMVRNKISTDE---VIYGLLIRI 415
Query: 176 YAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQS----- 230
Y LG + + ++ + Q + + Y+ + +L G++ + E+I+ K S
Sbjct: 416 YGKLGLYEDAHKTFEETKNRGQLTSEKTYLAMAQVHLTSGNVDKALEVIELMKSSNLWFS 475
Query: 231 ----------------------------ATSDFDISACNRLLGAFSDVGLTEKANEF 259
T D +CN +L + + LT KA EF
Sbjct: 476 RFAYIVLLQCYVMKEDVASAEGTFLALSKTGPPDAGSCNDMLSLYMGLNLTNKAKEF 532
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 100/236 (42%), Gaps = 5/236 (2%)
Query: 7 IHSGERYFEGLPLS--AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
+H FE + S A + ET+ ++ +Y + ++A E+F + ++ + Y
Sbjct: 803 LHFASSIFEHMISSGVAPSIETFNTMISVYGQDQKLDRAVEMFNQASSCSVPLDEKTYMN 862
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
++ Y G + + + + +++ + P +YN+ I+ A + + +K M
Sbjct: 863 LIGYYGKAGLMLEASQLFSKMQEGGIKPGKVSYNIMINVYANAGVLHETEKLFHTMQ-RQ 921
Query: 125 GGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDK 184
G D Y++LV Y + + AE + K I + ++ L+ + G +
Sbjct: 922 GYLPDSFTYLSLVQAYTRSLNYSKAEETIHAMQSKGIPP-SCVHFNILLHAFIKAGLIHE 980
Query: 185 IDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD-FDISA 239
++++ L + +L+ YL G+++E + +S SD F +SA
Sbjct: 981 AKRVYEDLSTFGLVPDLVCHRTMLNGYLKCGYVEEGINFFESICESTKSDRFIMSA 1036
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + P+ TY+ IS +D+ ++ SG D V Y ++ Y A
Sbjct: 246 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS-SGVDIDQVLYQTMIVAYERAGL 304
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LRMTKQKMTSR 202
+ +A+ + + I D I + AG G ++ +++ K
Sbjct: 305 VAHAKRLL-----HELKRPDNIPRDIAIHILAGAGRXEEATWVFRQAIDAGEVKDITVFE 359
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-DISACNRLLGAFSDVGLTEKANEFHM 261
I + S Y G++ EV + K F D + +L A+ + +KAN+ +M
Sbjct: 360 RMIHLFSKYKKYGNVVEVFD-----KMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYM 414
Query: 262 LLLQKNC 268
+ + C
Sbjct: 415 EMQEVGC 421
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 99/249 (39%), Gaps = 7/249 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ + + A ++++Q + + ++Y+ ++ L + K + +
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR PD+ YN I+ + + + EM +G + + Y L+ +Y+
Sbjct: 71 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRT-AGVTPNTASYSTLLTMYVENKK 129
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E + T + +I +Y LG + D+++ +R + +Y
Sbjct: 130 FLEA-LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 206 CILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+L Y G + GE I ++ Q + ++ N ++ + EKAN +
Sbjct: 189 TLLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 264 LQKNCAPTN 272
+ P +
Sbjct: 246 QNRGIEPNS 254
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 37/69 (53%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY+ ++ ++ ++A LF++++ S + + ++Y M+ Y G V ++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 84 EIKRKNVVP 92
E+KR + +P
Sbjct: 314 ELKRPDNIP 322
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+ Y ++A L ++ Q L+ N + Y + G+V+ ++ E+
Sbjct: 430 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
RK + +I+TYN ++ NIDQ K + +M +G D V Y L++ Y +
Sbjct: 490 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV-AGFHPDAVTYTTLMDAYCKSRE 548
Query: 146 LVNA 149
+V A
Sbjct: 549 MVRA 552
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 7/245 (2%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ +Y + H +A +L +++ + + Y+ ++ Y VG++++V ++E
Sbjct: 253 TASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIE 312
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ K + P+ +TYN I T + + ++ L EM G + D V Y L++ +
Sbjct: 313 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM-ISEGIAPDGVIYTTLIDGFCKL 371
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ V++ E +K +ITY +I G + D+++ + + +
Sbjct: 372 GN-VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 430
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
Y ++ Y G +KE + +Q Q + +I L G + ANE L
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTP-NIVTYTALADGLCKCGEVDTANE----L 485
Query: 264 LQKNC 268
L + C
Sbjct: 486 LHEMC 490
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + +K F ++++ N + YN ++ Y +G++++ +++ +
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + P++ +YN+ I+ ++ + + L+EM G + D V Y L+N Y
Sbjct: 276 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY-KGFTPDEVTYNTLLNGYCKEG- 333
Query: 146 LVNAESSTLVEAE--KSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
N + ++ AE ++ +TY LI N ++ + + +R+ + R
Sbjct: 334 --NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 391
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATS 233
Y ++ + G L E I+++ +S S
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFS 421
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 1 MTKVFGIHSGERYFEGLPLSA--KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFN 58
M K ++ +F+ + + TYT L+ ++ +A + + +S S +
Sbjct: 364 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 423
Query: 59 ALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLD 118
+ YN + + + ++E+ VV+E+ K + PD+ +Y+ IS +D+ +
Sbjct: 424 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 483
Query: 119 EMSCDSGGSDDWVKYVNLV 137
EM + G S D V Y +L+
Sbjct: 484 EM-VEKGVSPDAVTYSSLI 501
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL++ A+ +A E F++++ L N Y ++ + G + + ++ E+
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P + TYN +I +++ + EM + G + D V Y +++ +
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM-VEKGLAPDVVSYSTIISGFCRKGE 474
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
L A EK ++ +TY LI
Sbjct: 475 LDRAFQMKQEMVEKGVSP-DAVTYSSLI 501
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
AK TY ALL Y +A L E +KQ S N L Y+ ++ Y G
Sbjct: 363 AKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 422
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ +++K+ + PD+ Y+ + C + D+ L+EM+ D+G + + Y +L++ Y
Sbjct: 423 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMA-DNGIRPNVITYNSLLDAY 481
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 100/244 (40%), Gaps = 3/244 (1%)
Query: 14 FEGLPLSAKTS-ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSV 72
FE + + K + Y A++ + A +F + + +S + + +N +++
Sbjct: 179 FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRA 238
Query: 73 GQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVK 132
+ E+ + E++ + + D TYN I++ + ++ M+ SG +
Sbjct: 239 NRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVIT 298
Query: 133 YVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
Y +++ Y L + + E + I Y+ ++ ++A LGN D+ I +++
Sbjct: 299 YSTMIDGYAKLG-LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAM 357
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
Y +L SY G +E ++++ KQ S +I + L+ A+ G
Sbjct: 358 EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASP-NILTYSALIDAYCKHGF 416
Query: 253 TEKA 256
A
Sbjct: 417 HRDA 420
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY++L+ Y A+ +F + ++ N YN M+ + + ++ + EE+
Sbjct: 172 TYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEM 231
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ ++PD+ TYN I+ + I K +DEM D G D + Y +L++ + +H
Sbjct: 232 HCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMH-DRGQPPDIITYSSLLDA-LCKNH 289
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
V+ + L + + TY LI G + I++ L + +T Y
Sbjct: 290 QVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 349
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSA 231
++ + G E ++ + K ++
Sbjct: 350 VMIHGFCNKGLFDEALALLSKMKDNS 375
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 20 SAKTSETYT--ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEK 77
S + ETYT L+ L + + A ELF+++ + N + ++ Y G K
Sbjct: 50 SGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSK 109
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
++ E++R P+ YN ISS D +K +DEM D G S D V + +
Sbjct: 110 GLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKD-GLSPDVVTFNARI 168
Query: 138 NIYITASHLVNAE---SSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRM 194
+ ++ ++ A ++ + Q ITY+ ++ + G ++ +++ +++
Sbjct: 169 SALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKV 228
Query: 195 TKQKMTSRNYICILSSYLMLGHLKE----VGEIIDQWKQSATSDFDI 237
++ M +Y L + +G L E + E++D + ++I
Sbjct: 229 SENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNI 275
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 15 EGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQ 74
E L L TY +L + E+A LFE++K S N YN + + +G+
Sbjct: 191 EVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGK 250
Query: 75 VEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEMSCDSGGSDDWVKY 133
+ + LV++E+ + P++++YN+ + C + D + L + SG D V Y
Sbjct: 251 LLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDA--RMLMRLMTSSGVLPDTVTY 308
Query: 134 VNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR 193
L++ Y + A ++ L E + Y I+LY+ +WK R
Sbjct: 309 TTLLHGYCHTGKVSEA-NNVLREMMRDGCSPN--NYTCNILLYS----------LWKEGR 355
Query: 194 MTK-----QKMTSRNYI 205
+++ QKM + Y+
Sbjct: 356 ISEAEELLQKMNEKGYV 372
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 67/283 (23%)
Query: 26 TYTALLHLYAGAK-------------------------------WTE----KAEELFERV 50
TYT LLH Y W E +AEEL +++
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM 366
Query: 51 KQSNLSFNALMYNEMMTLYMSVGQVEK-----------------------VALVVEEIKR 87
+ + + N ++ + G+++K + LV + R
Sbjct: 367 NEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSR 426
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 147
K +PD+ +Y+ IS + + KK EM + D + Y ++ + +
Sbjct: 427 KKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAI-YDVFIHSFCKEGKIS 485
Query: 148 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN---Y 204
+A L + EK + TY+ LI+ GLG+K++I +I+ + +++ S + Y
Sbjct: 486 SA-FRVLKDMEKKGCNKTLQTYNSLIM---GLGSKNQIFEIYGLIDEMRERGVSPDVSIY 541
Query: 205 ICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 247
+LSS G +K+ ++D+ Q S +IS+ + L+ AF
Sbjct: 542 NNVLSSLCEGGRVKDAPSVLDEMLQKGISP-NISSFSILIKAF 583
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 99/239 (41%), Gaps = 47/239 (19%)
Query: 2 TKVFGIHSGERYFEGLPLSAKTSE--------TYTALLHLYAGAKWTEKAEELFERVKQS 53
T + G +R EG+ L + S+ TYT L+H + A+ + A+ +F+++
Sbjct: 403 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 462
Query: 54 NLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQV 113
+ N L YN ++ G++ K +V E ++R + PDI+TYN+ I
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI------------ 510
Query: 114 KKFLDEMSCDSGGSDD-WVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFL 172
E C +G +D W + NL + K ++ I Y+ +
Sbjct: 511 -----EGMCKAGKVEDGWELFCNL--------------------SLKGVSP-NVIAYNTM 544
Query: 173 IILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
I + G+K++ D + K ++ S Y ++ + L G + E+I + +
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ + AK E+ ELF + Q L N + Y ++ + + +V +++
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 86 KRKNVVPDIFTYNLWI 101
V P+I TYN+ +
Sbjct: 460 VSVGVHPNILTYNILL 475
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 104/250 (41%), Gaps = 13/250 (5%)
Query: 26 TYTALLHLYAG-AKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY++L+ +W++ A L + + ++ N + ++ ++ ++ G++ + + +E
Sbjct: 295 TYSSLISCLCNYGRWSD-ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ ++++ PDIFTY+ I+ +D+ K E+ + V Y L+ + A
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 145 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ +E + ++QR +TY LI + + D ++K +
Sbjct: 413 RVEEG-----MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y +L G L + ++ ++ Q +T + DI N ++ G E E
Sbjct: 468 ILTYNILLDGLCKNGKLAK-AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 261 MLLLQKNCAP 270
L K +P
Sbjct: 527 CNLSLKGVSP 536
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERV-----KQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
T ++LL+ Y +K A L +++ K +F L++ L++ E VAL
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG----LFLHNKASEAVAL 210
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNI 139
V + ++R PD+ TY ++ +ID L +M + G + D V Y +++
Sbjct: 211 VDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM--EKGKIEADVVIYNTIIDG 267
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
H+ +A + E + + TY LI G ++ + K
Sbjct: 268 LCKYKHMDDA-LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ ++ +++ G L E ++ D+ + + D DI + L+ F ++A
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 260 HMLLLQKNCAP 270
L++ K+C P
Sbjct: 386 FELMISKDCFP 396
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +L+ EKA E+ +++ S N + YN +++ ++E + +
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++PD+ T+N I + N D + +EM + G D Y L++
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK-NKGCKPDEFTYSILIDSLCYERR 418
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKI---DQIWKSLRMTKQKMTSR 202
L A L E E S R + Y+ LI GL +I ++I+ + + +S
Sbjct: 419 LKEA-LMLLKEMESSGCARNAVVYNTLI---DGLCKSRRIEDAEEIFDQMELLGVSRSSV 474
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y ++ ++E +++DQ D N LL F VG EKA +
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP-DKFTYNSLLTYFCRVGDIEKAGDIVQT 533
Query: 263 LLQKNCAP 270
+ C P
Sbjct: 534 MASNGCEP 541
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 7 IHSGERYFEGLPL--SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNE 64
I E F+ + L +++S TY L+ K E+A +L +++ L + YN
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 513
Query: 65 MMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
++T + VG +EK +V+ + PDIFTY I +D K L
Sbjct: 514 LLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLL 566
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A+ + Y L+ ++ E AEE+F++++ +S +++ YN ++ +VE+ +
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+++++ + + PD FTYN ++ +I++ + M+ +G D Y L+
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA-SNGCEPDIFTYGTLI 550
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 21/251 (8%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT L + + A E+F + S +A+ YN ++ + + ++E+
Sbjct: 198 YTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMN 253
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ V PD+FTYN+ I D+ + L EM D G + D V + ++++ A
Sbjct: 254 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV-DRGVTPDTVTFNSIMDGLCKAGKF 312
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
A S V AE++ + TY+ LI +GL + +D+ + + S ++
Sbjct: 313 ERAHSLLAVMAERN-CRPSCCTYNTLI---SGLCKQQNVDRAKDLV----DEFVSSGFVP 364
Query: 207 ILSSYLML-------GHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
+ +Y +L G + E E++ + + ++ N L+ TEKA E
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTP-NLVTYNTLIDGLCKASKTEKAYEL 423
Query: 260 HMLLLQKNCAP 270
L+ P
Sbjct: 424 LESLVSSGFVP 434
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ A T+KA E+ + ++ + + +N +M G+ E+ ++ +
Sbjct: 263 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 322
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+N P TYN IS N+D+ K +DE SG D V Y L +
Sbjct: 323 AERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFV-SSGFVPDVVTYSILAD 374
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +L++ Y + T++A+++ + ++ + +YN +M Y G+++++ V E++
Sbjct: 509 YVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYCKEGRLDEIPNVFEDMA 565
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ VP+I TYN+ + +D+ FL+ M +G D V Y +++ AS
Sbjct: 566 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH-SAGCVPDVVSYNIIIDGLFKAS 622
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 105/228 (46%), Gaps = 14/228 (6%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T T+ L+ Y+ ++ +K ++ E++ S L + +YN ++T++ +G K +V+
Sbjct: 379 TPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVL 438
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+E+ ++ + D+ TYN I ++++ K +M D G + + Y L+ ++
Sbjct: 439 DEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD-GIAPNITTYNTLLG-GLS 496
Query: 143 ASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
+ L+ + + +R + TYD L+ Y +GN+ K I + M +
Sbjct: 497 NAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKK--TIILHIEMITKG 554
Query: 199 M--TSRNYICILSSYLMLGHLKEVGEIID----QWKQSATSDFDISAC 240
T + Y ++S Y G + E E+++ + + + +DI C
Sbjct: 555 FVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTC 602
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 3/212 (1%)
Query: 40 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 99
T++AEE+FE + + NL+ N + Y+ ++ Y +G++E LV++++++++V P++ T++
Sbjct: 96 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 155
Query: 100 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
I+ A + + L EM + + Y L++ Y A + E +
Sbjct: 156 IINGYAKKGMLSKAVDVLREM-VQRNVMPNTIVYAILIDGYFKAGE-QDVADDFCKEMKS 213
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
+ + +D L+ +G D+ + + NY ++ Y G+
Sbjct: 214 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 273
Query: 220 VGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
I+ + K+ FD+ A N L+ +G
Sbjct: 274 ALSIVQEMKEKNIR-FDVVAYNALIKGLLRLG 304
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A TY+ALL Y E AE + +++++ ++ N + ++ ++ Y G + K
Sbjct: 112 APNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVD 171
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
V+ E+ ++NV+P+ Y + I D F EM
Sbjct: 172 VLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 211
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+ F +H R +G+P T+ TY++L+H E A+ L + +++ L N + Y
Sbjct: 649 EAFKLHDDMRS-KGIP---PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
++ Y +GQ++KV V++E+ ++ P+ TY + I + + ++ K L EM
Sbjct: 705 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM-V 763
Query: 123 DSGGSDDWVKYVNLVN 138
G D V Y L N
Sbjct: 764 GKGIVPDTVTYNVLTN 779
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 97/238 (40%), Gaps = 17/238 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T AL+H ++A L +++ + + + YN +++ G+VE+ + E+
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ + PD FTYNL I +D+ +E S D V V + I
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK-----SRDLVPNVYTYGVMIDGY- 606
Query: 146 LVNAESSTLVEAEKSIT-------QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
++ + E EK T + + Y+ LI Y GN + ++ +R
Sbjct: 607 ---CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 663
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
T+ Y ++ +G +++ +ID+ ++ ++ L+G + +G +K
Sbjct: 664 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP-NVVCYTALIGGYCKLGQMDKV 720
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YTAL+ Y +K + + + ++ N + Y M+ Y G ++ A ++ E+
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
K +VPD TYN+ + I++ K D MS G D + Y LV+ + S L
Sbjct: 764 GKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS-QEGLPLDEITYTTLVHGWQQPSAL 822
Query: 147 VNAE 150
N E
Sbjct: 823 TNQE 826
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 21/234 (8%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T +T T LL A EK+ +FE ++Q +S + +++ + + G+VE +
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTAINAFCKGGKVEDAIQL 268
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++++ V P++ TYN I N+D+ +F ++M D G + + Y L+N +
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD-GVNATLITYSVLINGLM 327
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN-----KDKIDQIWKSLRMTK 196
A S EK T + + Y+ LI Y +GN + + D + K +
Sbjct: 328 KLEKFNEANSVLKETLEKGFTPNE-VVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 386
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDV 250
+ S I+ + +G +++ I+++ + F I+ GAF+ +
Sbjct: 387 VTLNS-----IIQGFCKIGQMEQAECILEEM---LSRGFSINP-----GAFTTI 427
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 2/156 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ Y A E+ E+LF + NL N+++YN ++ Y G + + +++
Sbjct: 598 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 657
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K + P TY+ I ++ K +DEM G + V Y L+ Y
Sbjct: 658 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR-KEGLLPNVVCYTALIGGYCKLGQ 716
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+ + + L E ITY +I Y+ G+
Sbjct: 717 M-DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 751
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y+ ++ K A +L+ + +S N + Y+ +++ + +VG+++ + ++
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMI 289
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+N+ PD++T+N+ + + I K +DEM D G + V Y ++++ + +H
Sbjct: 290 SENIKPDVYTFNILVDVFCKSGKISYALKLVDEMH-DRGQPPNIVTYSSILDA-LCKTHR 347
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
V+ + L + + + TY LI G + I++ L + +T YI
Sbjct: 348 VDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIV 407
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSA 231
+ + G E ++ + +++
Sbjct: 408 MFYGFCKKGLFDEASALLSKMEENG 432
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+AL+ + + A +LF ++ N+ + +N ++ ++ G++ +V+E+
Sbjct: 264 TYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEM 323
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ P+I TY+ + + T +D+ L ++ D G + Y L++ T+
Sbjct: 324 HDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK-DQGIRPNMHTYTILIDGLCTSGK 382
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
L +A + E + + IT I+++ G K D+
Sbjct: 383 LEDARNI----FEDLLVKGYDITVVTYIVMFYGFCKKGLFDE 420
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 90/182 (49%), Gaps = 9/182 (4%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ TY L+ Y ++A ++ E + ++NL YN ++ + + G++++
Sbjct: 280 SPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFR 339
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ +E+++ NV+PD+ TYN I C+ + +V ++EM G + V Y N++ +
Sbjct: 340 IRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMD-KKGVKCNAVTY-NIILKW 397
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ + ++TL + E++ +TY+ LI Y G ++ K+ RM + MT
Sbjct: 398 MCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG------KMGKAFRMMDE-MT 450
Query: 201 SR 202
S+
Sbjct: 451 SK 452
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y +L + ++A +L +K LS N YN ++ Y +G +++ V+E +
Sbjct: 250 SYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIM 309
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
R N++P ++TYN+ ++ ID+ + DEM
Sbjct: 310 TRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEM 344
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 105/278 (37%), Gaps = 42/278 (15%)
Query: 26 TYTALLHLYAGAKWTEKAE--ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
TY L+ ++W + +E L E + + + NA+ YN ++ G + + ++
Sbjct: 355 TYNTLID--GCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLD 412
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
+++ + PD TYN I + + + + +DEM+ D W +N + +
Sbjct: 413 KMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWT--LNTILHCLCV 470
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILY--------------------------- 176
++ + L A K ++Y LI+ Y
Sbjct: 471 EKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTIT 530
Query: 177 -----AGLGNKDKIDQIWKSL-RMTKQKMTS--RNYICILSSYLMLGHLKEVGEIIDQWK 228
GL K+DQ L M + + Y I+ + + G++++ + ++
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 266
++ D+ CN LL G+ EKA + L+ K
Sbjct: 591 ENLFKP-DVYTCNILLRGLCREGMLEKALKLFNTLVSK 627
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 107/238 (44%), Gaps = 18/238 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ + ++ ++ LF+++++ + N ++ ++ ++ G+V+ +++E+
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++ PD+ YN+ I +D KF EM + DD V Y +++ + A
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDD-VTYTSMIGVLCKADR 320
Query: 146 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK--- 198
L A VE + + Q + + Y+ +I+ G G K + + L ++K
Sbjct: 321 LNEA-----VELFEHMDQNKQVPCAYAYNTMIM---GYGMAGKFEDAYSLLERQRRKGCI 372
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ +Y CILS G + E + ++ K+ A ++S N ++ G E A
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP--NLSTYNIMIDMLCKAGKLETA 428
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 47/81 (58%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L++
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712
Query: 83 EEIKRKNVVPDIFTYNLWISS 103
EE+ +K + P+++T+N + +
Sbjct: 713 EELMQKGLTPNVYTWNCLLDA 733
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ +YT L+H A + +A ELF +K+ + YN ++ + G+V K ++E
Sbjct: 584 ARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLE 643
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
E+K K P + TY I A +D+ +E
Sbjct: 644 EMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 107/261 (40%), Gaps = 9/261 (3%)
Query: 14 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
FEGL + TY +L+ ++A +L+E++ +N NA++Y ++ +
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
G+ E + E+ R PD+ N ++ I++ + E+ + G D
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK-NLGFIPDAR 585
Query: 132 KYVNLVNIYITA--SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
Y L++ + A +H T+ E + R Y+ +I + G +K Q+
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR---AYNTVIDGFCKSGKVNKAYQLL 642
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
+ ++ + T Y ++ + L E + ++ K S + ++ + L+ F
Sbjct: 643 EEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-SKGIELNVVIYSSLIDGFGK 701
Query: 250 VGLTEKANEFHMLLLQKNCAP 270
VG ++A L+QK P
Sbjct: 702 VGRIDEAYLIMEELMQKGLTP 722
>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
Length = 829
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T++ L+H E+A +LFERV + + + YN ++ Y +G +++ +++ +
Sbjct: 309 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 368
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + V PD+ TY + I+ + ++++ K ++ D G + V Y L+N
Sbjct: 369 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDV-LDQGLQLNIVTYSVLLNALFKKGM 427
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM-TSRNY 204
+ + L E I Y LI Y LG +K Q+ ++ +++ M TS N+
Sbjct: 428 FCEID-NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNH 486
Query: 205 ICI 207
I
Sbjct: 487 FSI 489
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T T +LL+ Y + AE F ++ S L A+ Y +M G+V + +
Sbjct: 551 PTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSL 610
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSD-DWVKYVNLVNIY 140
+E+ K + + TY++ + L D+ L +M DS G + D + Y L+ +
Sbjct: 611 FDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDM--DSKGINADPITYNTLIQGF 668
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ ++ A + + + +TY+ LI + G + + + +SLR K+
Sbjct: 669 CESENVQMAFHIHDIMLCRGLVPTP-VTYNLLINVLCLKGKVIQAEILLESLRENGIKLR 727
Query: 201 SRNYICILSSYLMLG----HLKEVGEIIDQWKQSATSDFDISACNRL 243
Y ++ + G + VG+++D +++ DF +A NRL
Sbjct: 728 KFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFS-AAINRL 773
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L+ A +A++L E++ S N + Y+ ++ GQV+ + + +
Sbjct: 269 TFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 328
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R+N P++ T+N+ I I++ ++ M ++G + D + Y +L++ +
Sbjct: 329 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR-ETGCAPDIITYNSLIDGLCKSFQ 387
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ A E ++ +TY L YA LG +I+ L
Sbjct: 388 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 434
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ ++ A + A +L E +K S NA+++ +M G+V + AL
Sbjct: 59 TYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVE-ALEHFRA 117
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
K+ PD+ TY + + D+ + L EM G + D V + L++
Sbjct: 118 MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVA-QGCAPDTVTFSTLID 169
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 13/250 (5%)
Query: 26 TYTALLHLYA-GAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+YT+L+H + G KW E+A+ LF + + N + +N ++ + G+V + ++E
Sbjct: 279 SYTSLIHGFCCGGKW-EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV 337
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ ++ +VP++ TYN I +++ ++ M G D + Y L+N Y S
Sbjct: 338 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP-SKGCEPDVICYTVLINGYCKTS 396
Query: 145 HLVNAESSTLVEAEKSITQRQWI-TYDFLII-LYAG--LGNKDKIDQIWKSLRMTKQKMT 200
+ E+ L + +R + TY L+ L+ G +G+ K+ + K +
Sbjct: 397 KV--EEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI 454
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFH 260
Y L+ G L E E+ ++ K S DI N L+ G E A E
Sbjct: 455 ---YGIFLNGLCKNGCLFEAMELFNKLK-SYNIKLDIECFNCLIDGLCKAGKLETAWELF 510
Query: 261 MLLLQKNCAP 270
L Q+ P
Sbjct: 511 EKLPQEELQP 520
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
E + L+ A E A ELFE++ Q L + + YN M+ + GQV K ++ ++
Sbjct: 488 ECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 547
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+++ PD TY I + +++V + L M
Sbjct: 548 MEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+A ELF ++K N+ + +N ++ G++E + E++ ++ + PD+ TYN+ I
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ + +M +G + D + Y L+ + + L
Sbjct: 530 HEFCRGGQVVKANILFQKME-KNGCTPDKITYATLIRGFFESKKL 573
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/203 (16%), Positives = 82/203 (40%), Gaps = 2/203 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y+ ++ + ++A +LFE +K ++ + Y ++ + G+ E+ + E+
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ V P++ T+N+ I + + K L+ M G + + Y +L+ +
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM-IQRGIVPNLLTYNSLIEGFCLVGD 362
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L N+ V + I Y LI Y ++ +++ + ++ + Y
Sbjct: 363 L-NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG 421
Query: 206 CILSSYLMLGHLKEVGEIIDQWK 228
+L+ G + + ++ K
Sbjct: 422 ALLTGLFQGGKVGDAKKLFGVMK 444
>gi|302781402|ref|XP_002972475.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
gi|300159942|gb|EFJ26561.1| hypothetical protein SELMODRAFT_97561 [Selaginella moellendorffii]
Length = 406
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 8/198 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL++ + TE EL E + L N ++N MM + G+ E+V + E +
Sbjct: 119 TYAALINGFCKCMDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERM 178
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
PD +Y + + + A + ID+ F+ + DS + Y L+N A+
Sbjct: 179 VEHECRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYA-DSENAPHLGAYNTLMNRLGKANK 237
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
A ++ + +TY+ LI L LG KID+ W QKM
Sbjct: 238 AHAALEIFYKIKDRPNYKPDLVTYNVLIDL---LGKVGKIDECWSCY----QKMRLHFQP 290
Query: 206 CILSSYLMLGHLKEVGEI 223
I S +LG L G +
Sbjct: 291 DIFSYNTLLGRLGRAGRV 308
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 102/247 (41%), Gaps = 22/247 (8%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY LL +Y A E A E F +++ S + Y+ +M + + V ++
Sbjct: 12 TYVTYRILLRIYVDASMVEDALETFHKMEFSEIKPTLDDYHYIMFKLIRLKCPRVVPMIF 71
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS--CDSGGSDDWVKYVNLVNIY 140
E +++ V P+ TYN ISS + + + + M CD D Y L+N +
Sbjct: 72 ESMRKNLVRPNTQTYNFLISSLCSLGKMAEARWRFSYMKKYCDP----DEFTYAALINGF 127
Query: 141 ITASHLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++ +E + + R ++ ++ ++ G +++ +++ + +
Sbjct: 128 CKC-----MDTEVTLELLEEMLARGLRPNLALFNMMMDAHSRSGKHEQVIALFERMVEHE 182
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ ++Y ++ ++ + G + E + ++ S + + A N L+ KA
Sbjct: 183 CRPDPKSYRVLVEAFAVSGRIDEAFGFVQRYADSENAP-HLGAYNTLMNRLG------KA 235
Query: 257 NEFHMLL 263
N+ H L
Sbjct: 236 NKAHAAL 242
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 39/159 (24%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVK-QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
Y L++ A A E+F ++K + N + + YN ++ L VG++++ ++
Sbjct: 224 AYNTLMNRLGKANKAHAALEIFYKIKDRPNYKPDLVTYNVLIDLLGKVGKIDECWSCYQK 283
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ R + PDIF+YN + +D LD+MS D
Sbjct: 284 M-RLHFQPDIFSYNTLLGRLGRAGRVDLFASVLDDMSRDG-------------------- 322
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKD 183
Q+ ITY L+ YA GN D
Sbjct: 323 -----------------VQQDRITYAILVEGYARAGNLD 344
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TYTAL++ L ++W++ A L + +K+ ++ N + Y+ ++ ++ G+V + + EE
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ R ++ PDI TY+ ++ ID+ + D M G D V Y L+N + A
Sbjct: 286 MVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV-SKGCLADVVSYNTLINGFCKAK 344
Query: 145 HLVNAESSTLVEAEKSITQR----QWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ + ++ + ++QR +TY+ LI + G+ DK + + +
Sbjct: 345 RVEDG-----MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L++ + AK E +LF + Q L N + YN ++ + G V+K ++
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 86 KRKNVVPDIFTYNLWI 101
+ PDI+TYN+ +
Sbjct: 392 DFFGISPDIWTYNILL 407
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 15/236 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y A++ K A + F+ +++ + N + Y ++ + + A ++ ++
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE---MSCDSGGSDDWVKYVNLVNIYITA 143
+K + P++ TY+ + + + + K+ +E MS D D V Y +LVN
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP----DIVTYSSLVNGLCLH 308
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ A + K ++Y+ LI G +++ K R Q+ N
Sbjct: 309 DRIDEANQMFDLMVSKGCLA-DVVSYNTLI---NGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 204 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y ++ + G + + E Q S DI N LLG D G EKA
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP-DIWTYNILLGGLCDNGELEKA 419
>gi|356558306|ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Glycine max]
Length = 1064
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+A++ Y E+A +FE +K + + ++ ++ + +G +KV + +E+
Sbjct: 302 TYSAIMSAYCKKGKVEEAFGVFESMKDLGIDLDEYVFVILIDGFGRIGDFDKVFCLFDEM 361
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R + P + YN ++ + + + L ++ D + Y L++ Y+ +
Sbjct: 362 ERSGISPSVVAYNAVMNGLSKHGRTSEADELLKNVAA------DVITYSTLLHGYMEEEN 415
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ T E+S + + LI +G + + ++K + S Y
Sbjct: 416 -IPGILQTKRRLEESGISMDVVMCNVLIRALFMMGAFEDVYALYKGMPEMDLIPNSVTYC 474
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISAC-NRLLGAFSDVGLTEKANE 258
++ Y +G ++E E+ D+++++ S AC N ++ G+TE A E
Sbjct: 475 TMIDGYCKVGRIEEALEVFDEFRKTLISSL---ACYNSIINGLCKNGMTEMAIE 525
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
+G+V +V +V+ ++R+ + D+ Y+ W + +V + EM + G D+V
Sbjct: 208 MGRVGEVCGLVQWMEREGLGLDVVLYSAWACGYVEERVLGEVFGRMREM-VEKGIGHDFV 266
Query: 132 KYVNLVNIYITASHLVNAESS--TLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
Y LV+ + S L + E S L + K + +TY ++ Y G ++ ++
Sbjct: 267 SYTVLVDGF---SKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAFGVF 323
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
+S++ + ++ ++ + +G +V + D+ ++S S + A N ++ S
Sbjct: 324 ESMKDLGIDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISP-SVVAYNAVMNGLSK 382
Query: 250 VGLTEKANEF 259
G T +A+E
Sbjct: 383 HGRTSEADEL 392
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 5/251 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T +Y L+ +TEKA +LF+ +K + +A +N ++ ++ G++ ++
Sbjct: 785 SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL-DEMSCDSGGSDDWVKYVNLVNI 139
+ +E+ + PD TYN+ ISS A + N+D+ F D +S D + Y L++
Sbjct: 845 LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR--TYGPLIDG 902
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
L A E + ++ LI Y +G+ + Q++K + +
Sbjct: 903 LAKVGRLEEA-MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++Y ++ + G + E ++ K + D D A NR++ E+A
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGL-DPDFIAYNRIINGLGKSQRMEEALAL 1020
Query: 260 HMLLLQKNCAP 270
+ + + P
Sbjct: 1021 YNEMRNRGIVP 1031
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+HL + + +A E++ R+ L + Y+ +M E V ++++E+
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+++T+ + I ID+ + M D G D V Y L++ A
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD-DEGCGPDLVTYTVLIDALCNAGQ 312
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
L NA+ V+ + + + + Y L+ + G+ D + W +
Sbjct: 313 LENAK-ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+A+ +F ++++ L+ +++ YN MM Y VGQV++ ++ E+ R PD+ N
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548
Query: 101 ISSCAATLNIDQVKKFLDEM 120
I S +D+ + D M
Sbjct: 549 IDSLYKAGRVDEAWQMFDRM 568
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 7/247 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ A E A+ELF ++K + + ++Y ++ + G ++ ++
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +PD+ T+ + + + D+ D M G + Y L+ + A
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR-KQGILPNLHTYNTLICGLLRAGR 417
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ +A L E Q TY+ I + G K + ++ +M + +
Sbjct: 418 IEDA-LKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFE--KMKAKGIVPNIVA 474
Query: 206 CILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
C S Y + +G L+E + + +++ + D N ++ +S VG ++A +
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAP-DSVTYNMMMKCYSKVGQVDEAVNLLSEM 533
Query: 264 LQKNCAP 270
++ C P
Sbjct: 534 IRNGCEP 540
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++YT L+ A ++A F +K + L + + YN ++ ++E+ + E
Sbjct: 964 KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ + +VPD++TYN + + ++Q K+ +E+ +G D Y L+ Y
Sbjct: 1024 MRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL-AGLEPDVFTYNALIRGY 1078
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 80/184 (43%), Gaps = 7/184 (3%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ TY + + + T KA E FE++K + N + N + +G++ + +
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
++ + PD TYN+ + + +D+ L EM +G D + +L++
Sbjct: 496 NGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM-IRNGCEPDVIVVNSLIDSLYK 554
Query: 143 ASHLVNAESSTLVEAEKSIT-QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
A + E+ + + K + +TY+ L+ +GLG + ++ + + +K S
Sbjct: 555 AGRV--DEAWQMFDRMKDMKLSPTVVTYNTLL---SGLGKEGRVQKAIELFESMIEKKCS 609
Query: 202 RNYI 205
N I
Sbjct: 610 PNTI 613
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ ++ E+A L+ ++ + + YN +M G VE+ + EE++
Sbjct: 1001 YNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ 1060
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+ PD+FTYN I + + N + M D G + + Y L N
Sbjct: 1061 LAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD-GCNPNIGTYAQLPN 1111
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL +A A+ +A LF+ + +S +S + +N +M Y G ++++ V+ +
Sbjct: 211 TYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRM 270
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K PDI T+N+ I S D++++ + ++ + S
Sbjct: 271 KSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSL----------LRSKEKPTLPTFNSM 320
Query: 146 LVNAESSTLVEAEKSITQR--------QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
+ N + L E +++ ++ +ITY+ LI++Y + +I+ + +K+
Sbjct: 321 ITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAREIFDEMMASKK 380
Query: 198 KMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLL 244
+M +L Y M G E ++++ +++ F S+ +LL
Sbjct: 381 EMKVSTLNAMLEVYCMNGLPMEADLLLERARKN--RPFPGSSTYKLL 425
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 26/249 (10%)
Query: 28 TALLHLYAGAKWTEKAEELFERVK-QSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
TA LH +K KA F+++K N + YN ++ + V + + +E+
Sbjct: 177 TAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELN 236
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
V PDIFT+N + + I +++ L M + D + + L++ Y
Sbjct: 237 ESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNVLIDSYGRRQEF 295
Query: 147 VNAES--STLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT---- 200
E +L+ +++ T T++ +I Y K+K + ++K KMT
Sbjct: 296 DKMEQVFKSLLRSKEKPT---LPTFNSMITNYGKARLKEKAENVFK-------KMTDMGY 345
Query: 201 SRNYICILSSYLMLGH---LKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
+ N+I S +M G + EI D+ ++ + +S N +L + GL +A+
Sbjct: 346 APNFITYESLIMMYGFCDCISRAREIFDEM-MASKKEMKVSTLNAMLEVYCMNGLPMEAD 404
Query: 258 EFHMLLLQK 266
LLL++
Sbjct: 405 ----LLLER 409
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 2/156 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL Y A E A + F+ + + ++++YN ++ Y +G V + + + +
Sbjct: 608 TYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAM 667
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + ++P TY+ I +D+ K+ +EM + G + Y L+ +
Sbjct: 668 KSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMR-NEGLLPNVFCYTALIGGHCKLGQ 726
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+ + S L+E + + ITY +I Y LGN
Sbjct: 727 M-DIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGN 761
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY++L+H ++A+E+FE ++ L N Y ++ + +GQ++ V +
Sbjct: 674 PTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSI 733
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+ E+ + P+ TY + I N+ + ++ L+EM +G + D V Y L Y
Sbjct: 734 LLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEM-IRNGIAPDTVTYNALQKGYC 792
Query: 142 TASHLVNAESSTLVEAEKS---ITQRQWITYDFLI 173
L + TL KS + + ITY+ LI
Sbjct: 793 KEREL----TVTLQSDHKSNIGLPLEEEITYNTLI 823
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 10/215 (4%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQ---SNLSFNALMYNEMMTLYMSVGQVEK 77
A + T ALLH G EE+FE +KQ L + + YN ++ G++E+
Sbjct: 498 AANTVTSNALLH---GLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEE 554
Query: 78 VALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV 137
+ EE+ ++ PD +TYN + A ID V + L E + G + Y L+
Sbjct: 555 AFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK-EYGFVPNVYTYALLL 613
Query: 138 NIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
Y A + +A + ++ EK + + Y+ LI Y +GN + ++ +++
Sbjct: 614 EGYCKADRIEDAVKFFKNLDYEK--VELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRG 671
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSA 231
T Y ++ +G + E EI ++ +
Sbjct: 672 ILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEG 706
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+S Y L+ Y +A +L + +K + Y+ ++ +G+V++ +
Sbjct: 640 SSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIF 699
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
EE++ + ++P++F Y I +D V L EMS +G + + Y +++ Y
Sbjct: 700 EEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMS-SNGIRPNKITYTIMIDGYCK 758
Query: 143 ASHLVNAE 150
++ A
Sbjct: 759 LGNMKEAR 766
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 9/203 (4%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A S+ T+L+HLY EKAE++F + +L+ ++ MM Y G EK
Sbjct: 390 ASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLA----AWSSMMNGYAVHGMGEKTMN 445
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
+ E++R + PD Y + +C+ + ++ + M D G V Y LV+I
Sbjct: 446 LFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDIL 505
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
A HL A +T+ E + W + Y + ++ ++ ++
Sbjct: 506 SRAGHLELAL-NTIQEMPTQFQSQAWAPFLSACRTYCDV----ELGEVANRCLLSSNPRN 560
Query: 201 SRNYICILSSYLMLGHLKEVGEI 223
N++ + + Y +G KE ++
Sbjct: 561 PVNHVLMANLYTSMGKWKEAAKV 583
>gi|302822814|ref|XP_002993063.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
gi|300139155|gb|EFJ05902.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
Length = 570
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 12/193 (6%)
Query: 8 HSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEK----AEELFERVKQSNLSFNALMYN 63
+ E F LP K + ALL L AG+ + E LF+ +K + A N
Sbjct: 183 RAAENMFANLPRVYKRKK---ALLVLMAGSSPQRENRVVMERLFKELKHRSWYTEASALN 239
Query: 64 EMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD 123
+MM + +++ + EE K V PD+ +YNL++ N +++ + D
Sbjct: 240 QMMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQED 299
Query: 124 SGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT----QRQWITYDFLIILYAGL 179
D + L YI+ A LVE E+ + +R+ TY+ L+ LY
Sbjct: 300 PNARPDESTLLILACGYISVGCFDKA-GKALVELEEGLDSGLFRRKQATYNKLLRLYGDT 358
Query: 180 GNKDKIDQIWKSL 192
+K+ ++ IW L
Sbjct: 359 KDKEGVESIWSIL 371
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
K G+H E F + +T++ A+L +YA + +KA ELF+++ + + ++Y
Sbjct: 391 KAEGVHKAEEIFAKVDGLLETNQV-IAMLSVYAHYGYADKARELFQKLPRKRMKHRLVVY 449
Query: 63 NEMMTLYMSVGQVEKVALV 81
++ Y+ G+V+K V
Sbjct: 450 KYLIAGYLREGEVKKALQV 468
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 2/191 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ ++ +A ++F + + NA+ +N +M +++ G+ EKV V ++
Sbjct: 284 TYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQM 343
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR D +YN I S N+D+ K LD M G N + I H
Sbjct: 344 KRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMV--KKGVAPNASTFNSIFGCIAELH 401
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
VN + ++ +TY+ L+ ++A + D + ++ K + ++ + Y
Sbjct: 402 DVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYR 461
Query: 206 CILSSYLMLGH 216
++ + GH
Sbjct: 462 ILILMFCEKGH 472
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 38 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 97
+ +AE F+ +K + ++Y ++ + G + K V ++K V P+++TY
Sbjct: 227 RRASEAELFFDSLKHK-FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTY 285
Query: 98 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ I S I + EM D+G + V + +L+ +++ A
Sbjct: 286 SIVIDSLCRCGQITRAHDVFSEM-IDAGCDPNAVTFNSLMRVHVKA 330
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
T T+ L+ Y+ ++ +K ++ E++ S L + +YN ++T++ +G K +
Sbjct: 737 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKV 796
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V++E+ ++ + D+ TYN I ++++ K +M D G + + Y L+
Sbjct: 797 VLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD-GIAPNITTYNTLLG-G 854
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTK 196
++ + L+ + + +R + TYD L+ Y +GN+ K + +
Sbjct: 855 LSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG 914
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIID----QWKQSATSDFDISAC 240
T + Y ++S Y G + E E+++ + + + +DI C
Sbjct: 915 FVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTC 962
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 3/212 (1%)
Query: 40 TEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 99
T++AEE+FE + + NL+ N + Y+ ++ Y +G++E LV++++++++V P++ T++
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501
Query: 100 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
I+ A + + L EM + + Y L++ Y A + E +
Sbjct: 502 IINGYAKKGMLSKAVDVLREM-VQRNVMPNTIVYAILIDGYFKAGE-QDVADDFCKEMKS 559
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
+ + +D L+ +G D+ + + NY ++ Y G+
Sbjct: 560 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 619
Query: 220 VGEIIDQWKQSATSDFDISACNRLLGAFSDVG 251
I+ + K+ FD+ A N L+ +G
Sbjct: 620 ALSIVQEMKEKNIR-FDVVAYNALIKGLLRLG 650
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 41/272 (15%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
A TY+ALL Y E AE + +++++ ++ N + ++ ++ Y G + K
Sbjct: 458 APNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVD 517
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC------------------ 122
V+ E+ ++NV+P+ Y + I D F EM
Sbjct: 518 VLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLK 577
Query: 123 ----------------DSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW 166
G D V Y +L++ Y + + A S EK+I +
Sbjct: 578 RVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI-RFDV 636
Query: 167 ITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR--NYICILSSYLMLGHLKEVGEII 224
+ Y+ LI GL K D + RM + + Y I+++Y + G ++ +I+
Sbjct: 637 VAYNALI---KGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDIL 693
Query: 225 DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ K ++ N L+G G EKA
Sbjct: 694 NEMKSYGIMPNAVTY-NILIGGLCKTGAVEKA 724
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 38/222 (17%)
Query: 49 RVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATL 108
R+ + L+ + + YN ++ Y G+ E ++ E+K ++P+ TYN+ I T
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719
Query: 109 NIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWIT 168
+++ + LDEM LV ++ IT
Sbjct: 720 AVEKAESALDEM---------------LVMEFVPTP----------------------IT 742
Query: 169 YDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWK 228
+ FL+ Y+ DKI QI + L + +++ Y +++ + LG ++ ++D+
Sbjct: 743 HKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMV 802
Query: 229 QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
+ S D+ N L+ + EKA + + + AP
Sbjct: 803 KRGISA-DLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAP 843
>gi|168004577|ref|XP_001754988.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694092|gb|EDQ80442.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 437
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
TALL++Y+ + E A ++FE++ + NL + + ++ Y G EK + E++ +
Sbjct: 213 TALLNMYSNCRSLEDALQIFEKLPERNL----VTWTSVIAAYAQAGIPEKAWIFYEKMLK 268
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 147
+ +V D F Y + CA ++++ K+ D M SG + D + L+++Y
Sbjct: 269 EGIVADKFAYTTVLHVCATMGDLEKGKQVHDHM-VKSGIATDQILDSTLIDMYAKCGRTD 327
Query: 148 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICI 207
A L+E + +R ++Y LI+ + G + Q + S++ + ++ +
Sbjct: 328 IAHQ--LLEI---MDERDVVSYTALIVGHVRQGRFQEALQTFSSMQRDGVLPNTVTFVGV 382
Query: 208 LSSYLMLGHLKE 219
L + LG L E
Sbjct: 383 LKACTGLGSLVE 394
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 111/242 (45%), Gaps = 20/242 (8%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
ALL++Y A ++F+ +++ ++ + M+T Y +G +E+ V E++ +
Sbjct: 15 ALLNMYMKCGSITDARQVFDNMRERDM----FTWTMMLTGYARLGHLEEAYRVYEQMLEE 70
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCD---SGGSDDWVKYVNLVNIYITASH 145
+ D T+ +S CA+ ++++ KK + CD +G D + L+++Y +
Sbjct: 71 RLPLDGVTFTTILSVCASLRSLEKGKK----VHCDMIKAGIHSDRILGNTLIDMYAKCGN 126
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ + T+ K R +T++ +I A G D+ ++++++R K Y+
Sbjct: 127 I--RQGHTMFTEMKD---RDVVTWNIIIAGAARNGYFDEAFELFEAMREAGLKPDKVTYV 181
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
C+L+ L E G I+ + A + D+ LL +S+ E A + L +
Sbjct: 182 CVLNVCSSL----EQGRILHSYIIEAGLELDLWVGTALLNMYSNCRSLEDALQIFEKLPE 237
Query: 266 KN 267
+N
Sbjct: 238 RN 239
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 8/224 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+++HLY+ E + +F + + N + YN +++ Y S G ++ V +E+
Sbjct: 114 TFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEM 173
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR PD+ +Y IS+ + + ++ D M + + V Y L++ Y + +
Sbjct: 174 KRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMK-RNKCKPNLVSYNALMDAYGSNGY 232
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L E E+ ++ L+ G K ID + + + + +
Sbjct: 233 LPQA-VDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACN 291
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQ------SATSDFDISACNRL 243
+ SY+ +G ++ + + S T IS C R+
Sbjct: 292 SAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRM 335
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 13/265 (4%)
Query: 13 YFE---GLPLSAKTSETYTALLHLYAGAKWTEKAEELFE--RVKQSNLSFNALMYNEMMT 67
YFE G + T+ T ++H K +A E+F R K+S + + + ++
Sbjct: 62 YFELMKGTNIRPDTT-TLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIH 120
Query: 68 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 127
LY GQ+E V + + + P+I +YN IS+ A+ + DEM SG
Sbjct: 121 LYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMK-RSGFC 179
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ 187
D V Y +L++ + + A +++ + ++Y+ L+ Y G+ + Q
Sbjct: 180 PDVVSYTSLISTFGRSQQPARAR-EVFDMMKRNKCKPNLVSYNALMDAY---GSNGYLPQ 235
Query: 188 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDIS--ACNRLLG 245
LR +Q N + I + G + I + ++ ACN +G
Sbjct: 236 AVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIG 295
Query: 246 AFSDVGLTEKANEFHMLLLQKNCAP 270
++ ++G EKA + + K P
Sbjct: 296 SYMNIGEYEKAINLYRSMENKTTKP 320
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL+ Y A ++A L ++++ L+ L YN ++ Y +G + + + EE+
Sbjct: 380 TYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEM 439
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ PD+ TY + ++ N+ ++F DEM G D Y + +T S
Sbjct: 440 VEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEM-LSKGLQPDCFAYNTRICAELTLSS 498
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
A V K I +TY+ +I GN K + K KM S
Sbjct: 499 TPMAFQLREVMMLKGIYP-DTVTYNVIIDGLCKTGN-------LKDAKRLKTKMVSDGLQ 550
Query: 204 -----YICILSSYLMLGHLKEVGEIID 225
Y C++ ++ G L+E ++++
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKLLN 577
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ +
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+ +++R + P + TYN I ++ + ++ +EM + G D Y L+N
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEM-VEQGCFPDVCTYTILMN 456
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L+ A +A++L E++ S N + Y+ ++ GQV+ + + +
Sbjct: 221 TFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 280
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+R+N P++ T+N+ I I++ ++ M ++G + D + Y +L++ +
Sbjct: 281 ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR-ETGCAPDIITYNSLIDGLCKSFQ 339
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
+ A E ++ +TY L YA LG +I+ L
Sbjct: 340 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 386
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ ++ A + A +L E +K + NA+++ +M G+V + AL
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVE-ALEHFRA 69
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
K+ PD+ TY + + D+ + L EM G + D V + L++
Sbjct: 70 MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIA-RGCAPDTVTFSTLID 121
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 85/220 (38%), Gaps = 21/220 (9%)
Query: 1 MTKVFGIHSGERYFEGLP---LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSF 57
+ K F + + F+ +P +SA + TY+ L H YA A +F + S
Sbjct: 334 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 393
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
+ Y ++ Y + +V +VEE+ K P + T + + + ++ +
Sbjct: 394 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 453
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQW------ITYDF 171
D M+ G +DD + Y N+ + + + L E+ I +R D
Sbjct: 454 DSMAA-RGCTDDALIY----NLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDA 508
Query: 172 LIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSY 211
L+ +G D Q+ KM+ R + +SSY
Sbjct: 509 LVESLCQVGRTDDAKQLL-------HKMSERGFAAAVSSY 541
>gi|224144700|ref|XP_002325381.1| predicted protein [Populus trichocarpa]
gi|222862256|gb|EEE99762.1| predicted protein [Populus trichocarpa]
Length = 1071
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 3/229 (1%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
+AE + R Q + + + YN + + G++ + E + P I TYN I
Sbjct: 752 EAENIIRRSIQDRMELDTVAYNIFIKAMLEAGRLHFATSIYEHMLLLGFTPSIQTYNTMI 811
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
S +D+ + + +C SG S D Y+N++N Y A A S + ++
Sbjct: 812 SVYGRGRKLDKAVEVFN-TACSSGVSLDEKAYMNMINYYGKAGKRHEA-SLLFAKMQEEG 869
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVG 221
+ ++Y+ + +YA G ++++++K + S Y+ ++ +Y E
Sbjct: 870 IKPGVVSYNVMAKVYAMSGLYHEVEELFKVMERDGCPPDSFTYLSLVQAYSESSKCLEAE 929
Query: 222 EIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
E I+ ++ + LL A GL +A +M LL P
Sbjct: 930 ETINAMQKKGIPP-SCAHFKHLLYALVKAGLMVEAERVYMELLSAGLNP 977
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
+TY ++ +Y + +KA E+F S +S + Y M+ Y G+ + +L+ +
Sbjct: 805 QTYNTMISVYGRGRKLDKAVEVFNTACSSGVSLDEKAYMNMINYYGKAGKRHEASLLFAK 864
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++ + + P + +YN+ A + +V++ M D G D Y++LV Y
Sbjct: 865 MQEEGIKPGVVSYNVMAKVYAMSGLYHEVEELFKVMERD-GCPPDSFTYLSLVQAY---- 919
Query: 145 HLVNAESSTLVEAEKSITQRQ 165
+ESS +EAE++I Q
Sbjct: 920 ----SESSKCLEAEETINAMQ 936
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y L+ +Y E A++ FE ++S L N Y M +++S G EK V+E +K
Sbjct: 400 YGLLIRIYGKLGLYEDAQKTFEETERSGLLSNEKTYLAMAQVHLSSGNFEKALSVIEVMK 459
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVK---KFLDEMSCDSGGSDDWVKYVNLVNIYI 141
+N+ F Y + + ++D + + L ++ C GS +++N+Y+
Sbjct: 460 SRNIWLSRFAYIVLLQCYCMKEDLDSAEVTFQALSKIGCPDAGSCS-----DMINLYV 512
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 7/224 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ Y EK+ ++ ER+K N+ + + +N ++ G VE V+ E+
Sbjct: 624 TYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEM 683
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + VPD FT+++ ++ D E + DSG + L+N
Sbjct: 684 KDQGFVPDAFTFSILFDGYSSNDKADAALGVY-ETAVDSGLKMNAYTCSILLNALCKEGQ 742
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
+ AE E K + + + Y+ +I Y+ G D + K M KQ M +
Sbjct: 743 IEKAEEILGREMAKGLVPNE-VLYNTMIDGYSRKG--DLVGARMKIDAMEKQGMKPDHLA 799
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAF 247
Y C++ ++ LG ++ + +++ K S + N L+G +
Sbjct: 800 YNCLIRTFCELGDMENAEQEVNKMKLKGVSP-SVETYNILIGGY 842
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 84/189 (44%), Gaps = 2/189 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ + ETY L+ Y +K +L + ++ + N + Y ++ ++ + +
Sbjct: 829 SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
V +++ + V P++ YN+ I C + I+ +F +EM G + V Y L++
Sbjct: 889 VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEM-FKKGIELNLVTYNTLIDGL 947
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
L AE L+E + + TY+ LI Y GN + +++ ++ + K T
Sbjct: 948 SMNGKLAEAE-DMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006
Query: 201 SRNYICILS 209
+ Y ++S
Sbjct: 1007 LKTYHLLIS 1015
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Query: 26 TYTALLH-LYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY L+ L K E AE++ + + L + YN +++ Y G V++ + EE
Sbjct: 939 TYNTLIDGLSMNGKLAE-AEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K + P + TY+L IS C I+ KK EMS D + Y +++ Y
Sbjct: 998 MKTSGIKPTLKTYHLLISLCTKE-GIELTKKIFGEMSLQP----DLLVYNGVLHCYAVHG 1052
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A + EKSI + TY+ LI+ +G ++ + ++ + + + Y
Sbjct: 1053 DMDKAFNLQKQMIEKSIGLDK-TTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTY 1111
Query: 205 ICILSSY 211
I+ +
Sbjct: 1112 DIIVKGH 1118
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Query: 50 VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLN 109
+++ + + L YN ++ + +G +E V ++K K V P + TYN+ I
Sbjct: 788 MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847
Query: 110 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
D+ L EM D+G + V Y L+N S L+ A+ ++ ++ I Y
Sbjct: 848 FDKCFDLLKEME-DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRI-Y 905
Query: 170 DFLIILYAGLGNKDKIDQIWK-SLRMTKQ--KMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
+ LI G +K KI+ ++ S M K+ ++ Y ++ M G L E +++ +
Sbjct: 906 NMLI---DGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLE 962
Query: 227 WKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPT 271
+ D+ N L+ + G ++ + + PT
Sbjct: 963 ISRKGLKP-DVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT 1006
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 42 KAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWI 101
K ELF R+K +S +YN ++ V Q++ + +E+ + ++P + TYN I
Sbjct: 570 KGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLI 629
Query: 102 SSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSI 161
N ++ K + M D+ + + L+ A + +AE + L E +
Sbjct: 630 DGYCKDGNPEKSFKVRERMKADN-IEPSLITFNTLLKGLFKAGMVEDAE-NVLTEMKDQG 687
Query: 162 TQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTSRNYICILSSYLMLGHLK 218
T+ IL+ G + DK D ++++ + KM + +L++ G ++
Sbjct: 688 FVPDAFTFS---ILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIE 744
Query: 219 EVGEIIDQ 226
+ EI+ +
Sbjct: 745 KAEEILGR 752
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 35/197 (17%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT+++ + A +A ELFE + Q+ A YN M+ Y G+ E ++E
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMS-----------------CDSG--- 125
+RK +P + +YN +S +D+ K +EM C +G
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLE 426
Query: 126 -------GSDDWVKYVNLVNIYITASHLVNAE----SSTLVEAEKSITQR-QWITYDFLI 173
D + N++ + I L A+ + ++ E T R +TY LI
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486
Query: 174 ILYAGLGNKDKIDQIWK 190
GLG ++D+ +K
Sbjct: 487 ---EGLGRHGRVDEAYK 500
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 106/238 (44%), Gaps = 18/238 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
YT L+ + ++ ++ LF+++++ + N ++ ++ ++ G+V+ +++E+
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K ++ PD+ YN+ I +D K EM + DD V Y +++ + A
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDD-VTYTSMIGVLCKADR 320
Query: 146 LVNAESSTLVEAEKSITQRQWI----TYDFLIILYAGLGNKDKIDQIWKSLRMTKQK--- 198
L A VE + + Q + + Y+ +I+ G G K + + L ++K
Sbjct: 321 LNEA-----VELFEHMDQNKQVPCAYAYNTMIM---GYGMAGKFEDAYSLLERQRRKGCI 372
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
+ +Y CILS G + E + ++ K+ A ++S N ++ G E A
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP--NLSTYNIMIDMLCKAGKLETA 428
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 47/81 (58%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T TY +++ A ++A LFE K + N ++Y+ ++ + VG++++ L++
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712
Query: 83 EEIKRKNVVPDIFTYNLWISS 103
EE+ +K + P+++T+N + +
Sbjct: 713 EELMQKGLTPNVYTWNCLLDA 733
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ +YT L+H A + +A ELF +K+ + YN ++ + G+V K ++E
Sbjct: 584 ARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLE 643
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
E+K K P + TY I A +D+ +E
Sbjct: 644 EMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 107/261 (40%), Gaps = 9/261 (3%)
Query: 14 FEGLPLSAKTSE--TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMS 71
FEGL + TY +L+ ++A +L+E++ +N NA++Y ++ +
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 72 VGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWV 131
G+ E + E+ R PD+ N ++ I++ + E+ + G D
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK-NLGFIPDAR 585
Query: 132 KYVNLVNIYITA--SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIW 189
Y L++ + A +H T+ E + R Y+ +I + G +K Q+
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR---AYNTVIDGFCKSGKVNKAYQLL 642
Query: 190 KSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSD 249
+ ++ + T Y ++ + L E + ++ K S + ++ + L+ F
Sbjct: 643 EEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-SKGIELNVVIYSSLIDGFGK 701
Query: 250 VGLTEKANEFHMLLLQKNCAP 270
VG ++A L+QK P
Sbjct: 702 VGRIDEAYLIMEELMQKGLTP 722
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT +L G++ ++ EEL + +N + + + +N ++T G V++ VV+ +
Sbjct: 358 TYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM 417
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
V DI TY+ + +D + L + G D + Y ++ +
Sbjct: 418 SEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLK-SYGCKPDTIAYTTVLKGLCSTEQ 476
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN-- 203
AE + E S +T++ ++ A L K +D+ + + + S +
Sbjct: 477 WERAE-ELMAEMLCSDCPPDEVTFNTVV---ASLCQKGLVDRAIRVVEQMSENGCSPDIV 532
Query: 204 -YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
Y CI+ + + E++ QS DI N LL V E A +
Sbjct: 533 TYNCIIDGLCNESCIDDAMELLSDL-QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMAN 591
Query: 263 LLQKNCAP 270
+++ NC P
Sbjct: 592 MMRSNCPP 599
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 95/264 (35%), Gaps = 4/264 (1%)
Query: 7 IHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMM 66
I R G+P T T+ L+ A +F+ + S + + Y+ ++
Sbjct: 235 IEDARRLINGMPFPPDTF-TFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILL 293
Query: 67 TLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGG 126
+ +++E++ K PDI TYN+ I++ ++D+ L + G
Sbjct: 294 DATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLP-SHGC 352
Query: 127 SDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKID 186
D V Y ++ + E L E + +T++ ++ G D+
Sbjct: 353 KPDAVTYTPVLKSLCGSERWKEVE-ELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI 411
Query: 187 QIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGA 246
++ + Y IL +G + + E++ + K S D A +L
Sbjct: 412 EVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLK-SYGCKPDTIAYTTVLKG 470
Query: 247 FSDVGLTEKANEFHMLLLQKNCAP 270
E+A E +L +C P
Sbjct: 471 LCSTEQWERAEELMAEMLCSDCPP 494
>gi|168016406|ref|XP_001760740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688100|gb|EDQ74479.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ TY ++ +Y A+ E+ + F+R+K L N + ++ +++ Y G+ K+ ++
Sbjct: 330 TTVTYNIIIEIYGKARKIEQMDTAFKRMKAQGLKPNCITFSSILSAYGKHGEWHKIEKIM 389
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
+++ N D YN I + L+ + ++K +EM + G + D + Y L+ Y
Sbjct: 390 RQVRHYNAA-DTAVYNAAIDAHRRALDFEAMEKLFEEMKME-GVAPDGITYTTLIEAYGR 447
Query: 143 ASHLVNA 149
L A
Sbjct: 448 VRKLQKA 454
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY LL + A K + A LF+ + Q L ++ ++T++ ++K V E++
Sbjct: 122 TYVKLLTMLARVKQPQAASNLFDFLLQDKLRPTLEIFTALITVFTKSNLLKKAFEVFEQM 181
Query: 86 KR-KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+ +PD + Y I C DQ KK +EM G V Y L+ Y A
Sbjct: 182 RLFDGCLPDKYAYTTMIKGCCDAGLYDQAKKLFNEM-MREGVEPTIVTYNTLIFGYGKAG 240
Query: 145 HLVNAES-STLVEAEKSITQRQWITYDFLIILYAGLGNK-DKIDQIWKSL 192
E +L+EA IT IT++ LI ++ GL N+ +++Q ++ L
Sbjct: 241 LFAEIEYLLSLMEA-NGITP-DTITWNTLIRVF-GLHNRIPEMEQAYEGL 287
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 96/235 (40%), Gaps = 7/235 (2%)
Query: 1 MTKVFGIHSGERYFEG-LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNA 59
+ K F + R F+G LP YT ++ A ++A++LF + + +
Sbjct: 171 LKKAFEVFEQMRLFDGCLP----DKYAYTTMIKGCCDAGLYDQAKKLFNEMMREGVEPTI 226
Query: 60 LMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE 119
+ YN ++ Y G ++ ++ ++ + PD T+N I I ++++ +
Sbjct: 227 VTYNTLIFGYGKAGLFAEIEYLLSLMEANGITPDTITWNTLIRVFGLHNRIPEMEQAYEG 286
Query: 120 MSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGL 179
+ G D V +L+ Y A E T S +TY+ +I +Y
Sbjct: 287 LLA-QGLMADEVTLNSLIGTYGRAGLYGKMECVTDFMRRYSYPM-TTVTYNIIIEIYGKA 344
Query: 180 GNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD 234
+++D +K ++ K + ILS+Y G ++ +I+ Q + +D
Sbjct: 345 RKIEQMDTAFKRMKAQGLKPNCITFSSILSAYGKHGEWHKIEKIMRQVRHYNAAD 399
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 8/203 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY +LL+ Y A ++A LF ++++ L+ L YN ++ Y +G +E+ ++ EE+
Sbjct: 1262 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM 1321
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +P++ TY + + ++ ++F DEM G D Y + +
Sbjct: 1322 GEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM-LSKGLQPDCFAYNTRICAELILGD 1380
Query: 146 LVNA---ESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
+ A ++E S T +TY+ LI GN ++ + +
Sbjct: 1381 IARAFELREVLMLEGISSDT----VTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCI 1436
Query: 203 NYICILSSYLMLGHLKEVGEIID 225
Y C++ ++ G L+E +I +
Sbjct: 1437 TYTCLIHAHCERGLLREARKIFN 1459
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T TY A++H + E A+ F ++ L + + YN ++ Y G +++ L+
Sbjct: 1223 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 1282
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+++R + P + TYN+ I ++++ + +EM
Sbjct: 1283 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM 1321
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 5/251 (1%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ T +Y L+ +TEKA +LF+ +K + +A +N ++ ++ G++ ++
Sbjct: 785 SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL-DEMSCDSGGSDDWVKYVNLVNI 139
+ +E+ + PD TYN+ ISS A + N+D+ F D +S D + Y L++
Sbjct: 845 LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR--TYGPLIDG 902
Query: 140 YITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKM 199
L A E + ++ LI Y +G+ + Q++K + +
Sbjct: 903 LAKVGRLEEA-MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961
Query: 200 TSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEF 259
++Y ++ + G + E ++ K + D D A NR++ E+A
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGL-DPDFIAYNRIINGLGKSQRMEEALAL 1020
Query: 260 HMLLLQKNCAP 270
+ + + P
Sbjct: 1021 YNEMRNRGIVP 1031
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+HL + + +A E++ R+ L + Y+ +M E V ++++E+
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + P+++T+ + I ID+ + M D G D V Y L++ A
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD-DEGCGPDLVTYTVLIDALCNAGQ 312
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
L NA+ V+ + + + + Y L+ + G+ D + W +
Sbjct: 313 LENAK-ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
+A+ +F ++++ L+ +++ YN MM Y VGQV++ ++ E+ R PD+ N
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548
Query: 101 ISSCAATLNIDQVKKFLDEM 120
I S +D+ + D M
Sbjct: 549 IDSLYKAGRVDEAWQMFDRM 568
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 25 ETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
++YT L+ A ++A F +K + L + + YN ++ ++E+ + E
Sbjct: 964 KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ + +VPD++TYN + + ++Q K+ +E+ +G D Y L+ Y
Sbjct: 1024 MRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL-AGLEPDVFTYNALIRGY 1078
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 103/248 (41%), Gaps = 9/248 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT L+ A E A+ELF ++K + + ++Y ++ + G ++ ++
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +PD+ T+ + + + D+ D M G + Y L+ + A
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR-KQGILPNLHTYNTLICGLLRAGR 417
Query: 146 LVNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ +A L++ +S+ Q TY I + G K + ++ +M + +
Sbjct: 418 IEDA--LKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFE--KMKAKGIVPNIV 473
Query: 205 ICILSSYLM--LGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHML 262
C S Y + +G L+E + + +++ + D N ++ +S VG ++A
Sbjct: 474 ACNASLYSLAEMGRLREAKTMFNGLRENGLAP-DSVTYNMMMKCYSKVGQVDEAVNLLSE 532
Query: 263 LLQKNCAP 270
+++ C P
Sbjct: 533 MIRNGCEP 540
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 23 TSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
T+ TY + + + T KA E FE++K + N + N + +G++ + +
Sbjct: 436 TAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMF 495
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
++ + PD TYN+ + + +D+ L EM
Sbjct: 496 NGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y +++ ++ E+A L+ ++ + + YN +M G VE+ + EE++
Sbjct: 1001 YNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ 1060
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVN 138
+ PD+FTYN I + + N + M D G + + Y L N
Sbjct: 1061 LAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD-GCNPNIGTYAQLPN 1111
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 6/214 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ Y G +A +LF+ +++ + N + YN ++ +V + +V+++
Sbjct: 269 TYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQM 328
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+ V P++ TYN I N+D+ LD++ +G S V Y L+ Y A +
Sbjct: 329 KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLK-SNGLSPSLVTYNILIEGYSKAGN 387
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ E E +T LI Y L +K QI+ S M K + Y+
Sbjct: 388 W-KGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSS--MEKFGLVPDVYV 444
Query: 206 --CILSSYLMLGHLKEVGEIIDQWKQSATSDFDI 237
++ M G++KE ++ + D+
Sbjct: 445 YGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDV 478
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T L++ + +LFE++K + L N YN +M Y G++ + + +E+
Sbjct: 234 TFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEM 293
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + V ++ TYN I + + +K +D+M + S + + Y L+ + +
Sbjct: 294 RERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMK-KAAVSPNLITYNTLIGGFCDVGN 352
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSR 202
L A SS L + + + +TY+ LI Y+ GN WK + ++M R
Sbjct: 353 LDKA-SSLLDQLKSNGLSPSLVTYNILIEGYSKAGN-------WKGVADLAREMEGR 401
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 3/230 (1%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT L+ E+A F+++ + L N + ++ G + + E++K
Sbjct: 200 YTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMK 259
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
+ P+++TYN ++ I + DEM + G + V Y L+ +
Sbjct: 260 INGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMR-ERGVEANVVTYNTLIGGMCREERV 318
Query: 147 VNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYIC 206
AE + + +K+ ITY+ LI + +GN DK + L+ + Y
Sbjct: 319 WEAE-KLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNI 377
Query: 207 ILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ Y G+ K V ++ + + S ++ C L+ A+ + EKA
Sbjct: 378 LIEGYSKAGNWKGVADLAREMEGRGISPSKVT-CTVLIDAYVRLQEMEKA 426
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 14/236 (5%)
Query: 27 YTALLHLYAGAKWTEKA----EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+ +LL + EKA EL ERVK F+ + M+ G ++K ++
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNELKERVK-----FDVYSFGIMIKGCCENGNLDKSFQLL 185
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
++ + P++ Y I C +I++ + F D+M + G + + L+N
Sbjct: 186 GLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMG-EMGLVANQYTFTVLINGLFK 244
Query: 143 ASHLVNAESSTLVEAEK-SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTS 201
+ + L E K + TY+ L+ Y G G + ++ +R +
Sbjct: 245 KG--LKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANV 302
Query: 202 RNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
Y ++ + E +++DQ K++A S ++ N L+G F DVG +KA+
Sbjct: 303 VTYNTLIGGMCREERVWEAEKLVDQMKKAAVSP-NLITYNTLIGGFCDVGNLDKAS 357
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 81/206 (39%), Gaps = 2/206 (0%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
+ + LLH +A T+ + F+ + + YN M+ G VE + E
Sbjct: 60 TRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFE 119
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E+K + ++PD TYN I +D F +EM D D + Y L+N +
Sbjct: 120 EMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK-DMCCEPDVITYNALINCFCKF 178
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
L E +++ + ++Y L+ + G + + + +R
Sbjct: 179 GKLPKG-LEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 237
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQ 229
Y ++ +Y +G+L + + ++ Q
Sbjct: 238 YTSLIDAYCKIGNLSDAFRLANEMLQ 263
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/195 (17%), Positives = 82/195 (42%), Gaps = 4/195 (2%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
+ AL + E+A + F ++K+ + N ++ + +G+ + V +++
Sbjct: 28 FDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 87
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHL 146
P +FTYN+ I +++ + +EM G D V Y ++++ + L
Sbjct: 88 GAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF-RGLIPDTVTYNSMIDGFGKVGRL 146
Query: 147 VNAESSTLVEAEKSI-TQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
++ E K + + ITY+ LI + G K + ++ ++ K +Y
Sbjct: 147 --DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYS 204
Query: 206 CILSSYLMLGHLKEV 220
++ ++ G +++
Sbjct: 205 TLVDAFCKEGMMQQA 219
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 20/245 (8%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
GL L + T+L+ +YA KA+ +F+++ + N+ + + ++ Y GQV
Sbjct: 227 GLELEPRVG---TSLVGMYAKCGDISKAQVIFDKLPEKNV----VTWTLLIAGYAQQGQV 279
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
+ ++E++++ V P+ TY + C L ++ KK + G + WV
Sbjct: 280 DVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWV---- 335
Query: 136 LVNIYITASHLVNAESSTLVEAEK---SITQRQWITYDFLIILYAGLGNKDKIDQIWKSL 192
VN IT + + L EA K + R +T+ ++ YA LG D+ +++ +
Sbjct: 336 -VNALIT----MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRM 390
Query: 193 RMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGL 252
+ K + L+S L+E G+ I Q A D+ + L+ ++ G
Sbjct: 391 QQQGIKPDKMTFTSALTSCSSPAFLQE-GKSIHQQLVHAGYSLDVYLQSALVSMYAKCGS 449
Query: 253 TEKAN 257
+ A
Sbjct: 450 MDDAR 454
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
+AL+ +YA + A +F ++ + N+ + + M+T G+ + E++K+
Sbjct: 438 SALVSMYAKCGSMDDARLVFNQMSERNV----VAWTAMITGCAQHGRCREALEYFEQMKK 493
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 147
+ + PD T+ +S+C +++ +K M D G Y V++ A HL
Sbjct: 494 QGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLE 553
Query: 148 NAESSTL 154
AE+ L
Sbjct: 554 EAENVIL 560
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFER-VKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
TY+ L++ G+ ++A ELFE V + + +AL YN ++ + +V++ ++E
Sbjct: 238 TYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEF 297
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
+K+ P++F Y+ ++ +++ K+ DEM G D V Y L+N + A
Sbjct: 298 MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMK-SLGLKPDTVGYTTLINFFCRAG 356
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQ---IWKSLRMTKQKMTS 201
V+ L + ++ + +T++ ++ GL + + ++ + + L +
Sbjct: 357 R-VDEAMELLKDMRENKCRADTVTFN---VILGGLCREGRFEEARGMLERLPYEGVYLNK 412
Query: 202 RNYICILSSYLMLGHLKEVGEII 224
+Y +L+S G L++ +++
Sbjct: 413 ASYRIVLNSLCREGELQKATQLV 435
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 87/207 (42%), Gaps = 3/207 (1%)
Query: 51 KQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNV-VPDIFTYNLWISSCAATLN 109
K NL N ++N ++ + G ++ VVEE+K+ +V P++ TY+ I+ +
Sbjct: 192 KSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGR 251
Query: 110 IDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITY 169
+ + + +EM D + Y L+N + V+ + +K+ Y
Sbjct: 252 LKEAIELFEEMVSKDQILPDALTYNALINGFCHGEK-VDRALKIMEFMKKNGCNPNVFNY 310
Query: 170 DFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQ 229
L+ + G ++ +++ ++ K + Y +++ + G + E E++ ++
Sbjct: 311 SALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRE 370
Query: 230 SATSDFDISACNRLLGAFSDVGLTEKA 256
+ D N +LG G E+A
Sbjct: 371 NKCRA-DTVTFNVILGGLCREGRFEEA 396
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+ LL + A E A EL +++ + NA+ Y +M S G+V++V V E+
Sbjct: 228 VFNTLLAGFVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEM 287
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDS 124
+RK PD TY +S+ + Q +FLD MS D+
Sbjct: 288 RRKGCAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDA 326
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 17 LPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVE 76
LPLS + YTALL+ + ++A+ + R+K + ++ + +++N ++ +++ + E
Sbjct: 187 LPLSIRH---YTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVAADRFE 243
Query: 77 KVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
+ E++R++ P+ +Y + + +D+V + EM G + D V Y L
Sbjct: 244 DAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMR-RKGCAPDSVTYGTL 302
Query: 137 VNIYITASHL 146
V+ + A L
Sbjct: 303 VSAFCKAGRL 312
>gi|302759218|ref|XP_002963032.1| hypothetical protein SELMODRAFT_404554 [Selaginella moellendorffii]
gi|300169893|gb|EFJ36495.1| hypothetical protein SELMODRAFT_404554 [Selaginella moellendorffii]
Length = 1398
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G+P S S TY L+H+YA A+ ++ A EL+ +S L N ++YN ++ S G
Sbjct: 1019 GIPFS---SATYAILIHMYAKARDSKAAAELYADYLRSGLESNLIVYNNVILSNGSSGFP 1075
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
++ +I++ + PD FTY ISS A + Q +++ ++ G ++ N
Sbjct: 1076 GHAQNILGDIRKAGLAPDRFTYCTLISSWARAGAMLQARRWFNKACKTKAGPS--IEMCN 1133
Query: 136 -LVNIYITASHLVNAE 150
L++ Y+ A + A+
Sbjct: 1134 ALIDGYLKAREVEPAK 1149
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
+TS++ +LL++ W +A ELF++ + N++ +N M+ ++ G+ E+ + V
Sbjct: 131 RTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIKGWLEKGEWEQASKV 190
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLV-NIY 140
+E+ + V P + TYN I +D+ K L++M G + + + L+
Sbjct: 191 FDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDM-IKKGKRPNAITFALLMEGSC 249
Query: 141 ITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+ H N + + E + + + +L + LG + KID+ L K++
Sbjct: 250 LIGEH--NEAKKMMFDMEYRGCKPTVVNFG---VLMSDLGKRGKIDEAKSVLHEMKKRHM 304
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWK-----QSATSDFDISACNRLLGAFSDVG 251
+ +++ +++ +L + G D ++ Q + + + L+ F VG
Sbjct: 305 KPD---VVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVG 357
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 93/236 (39%), Gaps = 15/236 (6%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
Y ++ +K + A +L R+++ + + + YN +++ S G+ +V +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM---SCDSGGSDDWVKYVNLVNIYITA 143
++ + PD+FT+N I +C + + ++F +EM S D D V Y L+
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP----DIVTYSLLIYGLCMY 304
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
S L AE K +TY LI G K++ K Q+ RN
Sbjct: 305 SRLDEAEEMFGFMVSKGCFP-DVVTYSILI---NGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 204 ---YICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
Y ++ Y G L EI + +I N LL D G EKA
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP-NIITYNVLLHGLCDNGKIEKA 415
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%)
Query: 21 AKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL 80
+ + TYT L+ Y A AEE+F R+ + N + YN ++ G++EK +
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 81 VVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
++ ++++ + DI TYN+ I + ++C D W ++ +Y
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L++ Y +K E +LF + Q + N + Y ++ Y G++ V EEI
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN----VAEEI 383
Query: 86 KRKNVV----PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
R+ V P+I TYN+ + I++ L +M +G D V Y ++
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ-KNGMDADIVTYNIIIRGMC 442
Query: 142 TASHLVNA 149
A + +A
Sbjct: 443 KAGEVADA 450
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 102/252 (40%), Gaps = 53/252 (21%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+H Y AK A ELFE + N + Y+ ++ + GQVEK + E +
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 86 KRKNVVPD----------------IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
VPD + TY + + +++ +K LD MS + G +
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-GCEPN 673
Query: 130 WVKYVNLVNIYITASHLVNAES-----------------STLVEAEKSITQRQWITYDFL 172
+ Y L++ L A+ S+L++ + +RQ + L
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV-KRQDLASKVL 732
Query: 173 -----------IILYA----GLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLML 214
+++Y GL K D+ +K ++M ++K N Y ++ + M+
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 215 GHLKEVGEIIDQ 226
G ++ E++++
Sbjct: 793 GKIETCLELLER 804
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEM 120
Y++++ + ++E L+ EE+KR +V D++TY + + S C A L I+Q +K+ +EM
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL-IEQARKWFNEM 544
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGL 179
+ G + + V Y L++ Y+ A + A E + +E + +TY LI +
Sbjct: 545 R-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP--NIVTYSALIDGHCKA 601
Query: 180 GNKDKIDQIWKSLRMTKQK 198
G +K QI++ RM K
Sbjct: 602 GQVEKACQIFE--RMCGSK 618
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ T++A +L + +++ N + Y M+ + +G++E ++E +
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K V P+ TY + I C +D L+EM
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P T TY++L+ Y K + A ++ ++ +++ + N ++Y EM+ VG+
Sbjct: 704 GFP---ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
++ +++ ++ K P++ TY I I+ + L+ M G + ++V Y
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG-SKGVAPNYVTYRV 819
Query: 136 LVN 138
L++
Sbjct: 820 LID 822
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 11/221 (4%)
Query: 58 NALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFL 117
+++++N ++ Q+ + ++EE+ + +VPD+ TYN I + +++ ++ L
Sbjct: 172 DSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLL 231
Query: 118 DEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAE-KSITQRQWITYDFLIILY 176
+ M + V Y L+ Y + L+E +S T +T++ LI
Sbjct: 232 ETMV-KRKVRPNLVTYNTLIYGYCKTG--CTGLAHQLIERMIQSGTHPDVVTFNSLI--- 285
Query: 177 AGLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLMLGHLKEVGEIIDQWKQSATS 233
+G K KID+ + L + K+ + + N Y ++S G E E++ +
Sbjct: 286 SGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGIL 345
Query: 234 DFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNAS 274
DI N L+G F E+A + L++++ P S
Sbjct: 346 P-DIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS 385
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 115/252 (45%), Gaps = 18/252 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELF-ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEE 84
T LL A+ +A ++F + + + N + YN ++ + G +E+ ++ E
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDE-MSCDSGGSDDWVKYVNLVNIYITA 143
+K + PD+ T++ + + T N+ + ++ E + C + D V + LV+ A
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVEC----APDSVLFNILVHGLCKA 186
Query: 144 SHLVNAESSTLVE--AEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMT 200
+ L +E+ ++E +E+ I +TY+ LI GL ++++ + L M K+K+
Sbjct: 187 NQL--SEARQMIEEMSERGIVP-DVVTYNSLI---DGLCKSYRMEEARQLLETMVKRKVR 240
Query: 201 SR--NYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANE 258
Y ++ Y G ++I++ QS T D+ N L+ F +KA E
Sbjct: 241 PNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHP-DVVTFNSLISGFCQKSKIDKACE 299
Query: 259 FHMLLLQKNCAP 270
L+ + CAP
Sbjct: 300 VLHLMKKGLCAP 311
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L++ Y T A +L ER+ QS + + +N +++ + +++K V+ +
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM 304
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
K+ P++ TYN+ IS ++ + L EM G D + Y +L+ I+
Sbjct: 305 KKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD-GRGILPDIITYNSLIGIF 358
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +L+ + +KA E+ +K+ + N + YN +++ G+ + ++ E+
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM 339
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNL 136
+ ++PDI TYN I I+Q + + M + G D + Y L
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMV-ERGVIPDGISYCTL 389
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + P+ TY+ IS +D+ ++ SG D V Y ++ Y A
Sbjct: 246 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS-SGVDIDQVLYQTMIVAYERAGL 304
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LRMTKQKMTSR 202
+ +A+ + + I D I + AG G ++ +++ K
Sbjct: 305 VAHAKRLL-----HELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDIXVFE 359
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-DISACNRLLGAFSDVGLTEKANEFHM 261
I + S Y G++ EV + K F D + +L A+ + +KAN+ +M
Sbjct: 360 RMIHLFSKYKKYGNVVEVFD-----KMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYM 414
Query: 262 LLLQKNC 268
+ + C
Sbjct: 415 EMQEVGC 421
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 99/249 (39%), Gaps = 7/249 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ + + A ++++Q + + ++Y+ ++ L + K + +
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR PD+ YN I+ + + + EM +G + + Y L+ +Y+
Sbjct: 71 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRT-AGVTPNTASYSTLLTMYVENRK 129
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E + T + +I +Y LG + D+++ +R + +Y
Sbjct: 130 FLEA-LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 206 CILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+L Y G + GE I ++ Q + ++ N ++ + EKAN +
Sbjct: 189 TLLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 264 LQKNCAPTN 272
+ P +
Sbjct: 246 QNRGIEPNS 254
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 37/69 (53%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY+ ++ ++ ++A LF++++ S + + ++Y M+ Y G V ++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 84 EIKRKNVVP 92
E+KR + +P
Sbjct: 314 ELKRPDNIP 322
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 3 KVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMY 62
+ F +H R +G+P T+ TY++L+H E A+ L + +++ L N + Y
Sbjct: 716 EAFKLHDDMRS-KGIP---PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 771
Query: 63 NEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSC 122
++ Y +GQ++KV V++E+ ++ P+ TY + I + + ++ K L EM
Sbjct: 772 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM-V 830
Query: 123 DSGGSDDWVKYVNLVN 138
G D V Y L N
Sbjct: 831 GKGIVPDTVTYNVLTN 846
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 97/238 (40%), Gaps = 17/238 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T AL+H ++A L +++ + + + YN +++ G+VE+ + E+
Sbjct: 560 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 619
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
++ + PD FTYNL I +D+ +E S D V V + I
Sbjct: 620 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK-----SRDLVPNVYTYGVMIDGY- 673
Query: 146 LVNAESSTLVEAEKSIT-------QRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQK 198
++ + E EK T + + Y+ LI Y GN + ++ +R
Sbjct: 674 ---CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730
Query: 199 MTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
T+ Y ++ +G +++ +ID+ ++ ++ L+G + +G +K
Sbjct: 731 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP-NVVCYTALIGGYCKLGQMDKV 787
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Query: 22 KTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALV 81
T +T T LL A EK+ +FE ++Q +S + +++ + + G+VE +
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTAINAFCKGGKVEDAIQL 335
Query: 82 VEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYI 141
++++ V P++ TYN I N+D+ +F ++M D G + + Y L+N +
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD-GVNATLITYSVLINGLM 394
Query: 142 TASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN-----KDKIDQIWKSLRMTK 196
A S EK T + + Y+ LI Y +GN + + D + K +
Sbjct: 395 KLEKFNEANSVLKETLEKGFTPNE-VVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 453
Query: 197 QKMTSRNYICILSSYLMLGHLKEVGEIIDQ 226
+ S I+ + +G +++ I+++
Sbjct: 454 VTLNS-----IIQGFCKIGQMEQAECILEE 478
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 2/156 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ Y A E+ E+LF + NL N+++YN ++ Y G + + +++
Sbjct: 665 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM 724
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ K + P TY+ I ++ K +DEM G + V Y L+ Y
Sbjct: 725 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR-KEGLLPNVVCYTALIGGYCKLGQ 783
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGN 181
+ + + L E ITY +I Y+ G+
Sbjct: 784 M-DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 818
>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
succulentifolia]
Length = 382
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 147 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 206
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + P+ TY+ IS +D+ ++ SG D V Y ++ Y A
Sbjct: 207 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS-SGVDIDQVLYQTMIVAYERAGL 265
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LRMTKQKMTSR 202
+ +A+ + + I D I + AG G ++ +++ K
Sbjct: 266 VAHAKRLL-----HELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGXVKDITVFE 320
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-DISACNRLLGAFSDVGLTEKANEFHM 261
I + S Y G++ EV + K F D + +L A+ + +KAN+ +M
Sbjct: 321 RMIHLFSKYKKYGNVVEVFD-----KMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYM 375
Query: 262 LLLQKNC 268
+ + C
Sbjct: 376 EMQEVGC 382
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY+ ++ ++ ++A LF++++ S + + ++Y M+ Y G V ++
Sbjct: 215 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 274
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+KR PD ++ I A I++ ++ + D+G D + +++++
Sbjct: 275 ELKR----PDNIPRDIAIHILAGAGRIEEA-TWVFRQAIDAGXVKDITVFERMIHLF 326
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 104/248 (41%), Gaps = 7/248 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ A+ ++AE++F+++ + + N + YN ++ +V+ V +++
Sbjct: 227 TYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM 286
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V P TYN I +D+ + +M D G D V Y +++ A
Sbjct: 287 VDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM-IDRGVKPDHVTYNTIIDGLCKAQA 345
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ AE +K + + +TY +I + D+ + +++ + K + Y
Sbjct: 346 IDKAEGVFQQMIDKGV-KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYN 404
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDF--DISACNRLLGAFSDVGLTEKANEFHMLL 263
C++ YL G +EV + + K+ + D D+ LL G +A +
Sbjct: 405 CLIHGYLSTGQWEEV---VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461
Query: 264 LQKNCAPT 271
++K P+
Sbjct: 462 IRKGIKPS 469
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 38 KWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTY 97
KW EK EELF + + + + +N ++ G+V + +++ + + PD+ +Y
Sbjct: 590 KW-EKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISY 648
Query: 98 NLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
N I +D+ K LD M +G + V Y L++ Y A + NA
Sbjct: 649 NTLIDGHCFASRMDEAVKLLDGMV-SAGLKPNIVSYNTLLHGYCKAGRIDNA 699
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 48 ERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAAT 107
E V +N+ FN+L+Y +V + EKV + E+ + + PDI +N + +
Sbjct: 569 EGVTPNNVVFNSLVYG-----LCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKE 623
Query: 108 LNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSIT-QRQW 166
+ + ++ +D M C G D + Y L++ + AS + E+ L++ S +
Sbjct: 624 GRVMEARRLIDSMVC-MGLKPDVISYNTLIDGHCFASRM--DEAVKLLDGMVSAGLKPNI 680
Query: 167 ITYDFLIILYAGLGNKDKIDQIWKSLR-MTKQKMTS--RNYICILSSYLMLGHLKEVGEI 223
++Y+ L+ Y G +ID + R M ++ +T Y IL+ G E E+
Sbjct: 681 VSYNTLLHGYCKAG---RIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+ + A ++A +L + + + L N + YN ++ Y G+++ + E+
Sbjct: 647 SYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREM 706
Query: 86 KRKNVVPDIFTYN 98
RK V P + TYN
Sbjct: 707 LRKGVTPGVETYN 719
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERV---KQSNLSFNALMYNEMMTLYMSVGQVEKVALVV 82
+Y LL + E+A EL + + S+ S + + YN ++ + + GQV+K +
Sbjct: 157 SYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF 216
Query: 83 EEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYIT 142
E+ V PD+ TYN I +D+ + +M + G + V Y +++
Sbjct: 217 LEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMV-EKGVKPNNVTYNTIIDGLCK 272
Query: 143 ASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
A + AE +K + +TY+ +I
Sbjct: 273 AQEVDMAEGVFQKMVDKGVKPSN-VTYNTII 302
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 20 SAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVA 79
S + + ++TAL+ YA + ++A ELF+ + ++ + +N M++ Y G+VE+
Sbjct: 190 SMRDAVSFTALITGYASKGFLDEARELFDEIPVRDV----VSWNAMISGYAQSGRVEEAM 245
Query: 80 LVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSG-GSDDWVKYVN-LV 137
EE++R V P++ T +S+CA + + Q+ ++ D G GS+ ++ VN L+
Sbjct: 246 AFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSN--IRLVNGLI 303
Query: 138 NIYITASHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ 197
++Y+ L E+S L E I + ++++ +I Y + + +++ + +
Sbjct: 304 DMYVKCGDL--EEASNLFE---KIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNI 358
Query: 198 KMTSRNYICILSSYLMLGHL 217
++ IL + LG L
Sbjct: 359 DPNDVTFLSILPACANLGAL 378
>gi|302801528|ref|XP_002982520.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
gi|300149619|gb|EFJ16273.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
Length = 694
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 28 TALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKR 87
A++++Y + A LFE NL+ +N M++ Y G+ E+ + E ++R
Sbjct: 393 AAIVNMYGKCGELDTARHLFEDTSHRNLA----SWNSMISAYALHGRAEQAFDLSERMRR 448
Query: 88 KNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLV 147
+ V+PD T+ +++C A + Q K + DSG D V LVN Y +L
Sbjct: 449 EGVLPDRVTFITLLNACVAGGAVRQ-GKMIHARIIDSGLEKDTVVANALVNFYSKCGNLD 507
Query: 148 NAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQ---KMTSRNY 204
A S ++ R ++++ +I AG + + KS+ + +Q + + +
Sbjct: 508 TATSLF-----GALDYRDVVSWNGII---AGFAHNGHAREALKSMWLMQQDGVRPDAITF 559
Query: 205 ICILSSYLMLGHLKEVGE 222
+ ILS+ G L++ G+
Sbjct: 560 LTILSASSHAGFLRQGGD 577
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 19 LSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKV 78
LSAKT+ T +++ A + T +AE LFE ++QS + YN ++ Y+ G ++
Sbjct: 302 LSAKTA-TLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDA 360
Query: 79 ALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
L+V E++++ V PD TY+L I + + + L EM
Sbjct: 361 ELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM 402
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 12/242 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ Y A E A + + ++ ++ N+ +++ ++ Y G+ +K V++E+
Sbjct: 378 TYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEM 437
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD YN+ I + +D D M G D V + L++ +
Sbjct: 438 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM-LSEGIEPDRVTWNTLIDCHCKHGR 496
Query: 146 LVNAESSTLVEA-EKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ AE + EA E+ TY+ +I Y G++++ D + + L K + N
Sbjct: 497 HIVAEE--MFEAMERRGCLPCATTYNIMINSY---GDQERWDDMKRLLGKMKSQGILPNV 551
Query: 205 I---CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKA-NEFH 260
+ ++ Y G + E +++ K S + N L+ A++ GL+E+A N F
Sbjct: 552 VTHTTLVDVYGKSGRFNDAIECLEEMK-SVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 610
Query: 261 ML 262
++
Sbjct: 611 VM 612
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ Y + ++ ++ +K+ + + +N ++ +V++ V E++
Sbjct: 44 TYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDM 103
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K+K+ PD +TY + I +D+ +EM + G S + + Y ++ + S
Sbjct: 104 KKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEM-LNKGCSPNLIAYNTMIQA-LANSR 161
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+V+ + + + TY ++ L A G K+D++ + ++++ M Y
Sbjct: 162 MVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHKLDKV---VELSRKYMNRSIYA 218
Query: 206 CILSSYLMLGHLKEVGEII-DQWKQSATSDFDISACNRLLGAFSDVGLTEKA 256
++ + LGH E + + W D D AC +L + + G T +A
Sbjct: 219 YLVRTLNKLGHASEAHRLFCNMWSYHDRGDRD--ACLSMLESLCNAGKTVEA 268
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 29 ALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRK 88
++L A T +A +L ++ + ++ + +MYN + T + Q+ + + E++K
Sbjct: 254 SMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLD 313
Query: 89 NVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVN 148
+PDIFTYN+ ISS + + K +E+ +S D + Y +L+N L
Sbjct: 314 GPLPDIFTYNILISSFGRAGKVYEAIKIFEELE-NSDCKPDIISYNSLINCLGKNGDLDE 372
Query: 149 AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICIL 208
A EK + +TY LI + K D++ + R+ + + + I+
Sbjct: 373 AHIRFREMQEKGLNP-DVVTYSTLIECFG------KTDKVEMACRLFDEMLAEGCFPNIV 425
Query: 209 SSYLMLGHLKEVG---EIIDQW----KQSATSD 234
+ ++L L+ G E +D + +Q T D
Sbjct: 426 TYNILLDCLERSGRTAEAVDLYAKLKQQGLTPD 458
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY L+ + A +A ++FE ++ S+ + + YN ++ G +++ + E+
Sbjct: 321 TYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREM 380
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
+ K + PD+ TY+ I T ++ + DEM
Sbjct: 381 QEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEM 415
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 20/252 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYT ++ + +++ LFE + S N + YN M+ + V+K L+ ++
Sbjct: 114 TYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKM 173
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KN P+ FTY++ ++ AA + ++ K + E+S KY+N +IY
Sbjct: 174 MEKNCRPNEFTYSVILTLLAAEGQLHKLDKVV-ELS---------RKYMNR-SIYAYLVR 222
Query: 146 LVN-----AESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMT 200
+N +E+ L S R D + + L N K + L +K
Sbjct: 223 TLNKLGHASEAHRLFCNMWSYHDRG--DRDACLSMLESLCNAGKTVEAIDLLGKIHEKGI 280
Query: 201 SRNYICILSSYLMLGHLKEVGEIIDQWKQSATSD--FDISACNRLLGAFSDVGLTEKANE 258
+ + I + + LG LK++ + D +++ DI N L+ +F G +A +
Sbjct: 281 NTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIK 340
Query: 259 FHMLLLQKNCAP 270
L +C P
Sbjct: 341 IFEELENSDCKP 352
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ Y K KA+ +F + Q ++ + Y+ M++ + +++ + E +
Sbjct: 296 TYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGM 355
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ +NV+PD+ Y+ I + I+ K++DEM D G + + Y +L++ + SH
Sbjct: 356 RNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMH-DRGQPPNVITYTSLIDA-LCKSH 413
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLI 173
V+ + L + + Q TY+ L+
Sbjct: 414 QVDKAIALLKKIKDQGIQANMYTYNILV 441
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 40/246 (16%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+T+++HLY+ E + +F + + N + YN +++ Y S G ++ V +E+
Sbjct: 209 TFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEM 268
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR PD+ +Y IS+ + + ++ D M + + V Y L++ Y + +
Sbjct: 269 KRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMK-RNKCKPNLVSYNALMDAYGSNGY 327
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L A L E E+ ++ L+ G K ID
Sbjct: 328 LPQA-VDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDS------------------ 368
Query: 206 CILSSYLMLG-HLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLL 264
+LS+ + G HL + ACN +G++ ++G EKA + +
Sbjct: 369 -VLSAAELRGIHLNTI------------------ACNSAIGSYMNIGEYEKAINLYRSME 409
Query: 265 QKNCAP 270
K P
Sbjct: 410 NKTTKP 415
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/283 (17%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
++ Y ++ L+A ++A LF +++ + YN ++ + GQ ++E
Sbjct: 30 NDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIME 89
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
++ R + P T+N I++C + N + + +M+ D+G D V + +++ Y +
Sbjct: 90 DMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMT-DNGVGPDLVTHNIVLSAYKSG 148
Query: 144 SHL--------------VNAESSTL----------------------VEAEKSITQRQWI 167
+ + +++TL + ++S + +
Sbjct: 149 AQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVV 208
Query: 168 TYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQW 227
T+ +I LY+ G + ++ ++ K +Y ++S+Y G KE + D+
Sbjct: 209 TFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEM 268
Query: 228 KQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAP 270
K+S D+ + L+ F +A E ++ + C P
Sbjct: 269 KRSGFCP-DVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKP 310
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + P+ TY+ IS +D+ ++ SG D V Y ++ Y A
Sbjct: 246 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS-SGVDIDQVLYQTMIVAYERAGL 304
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LRMTKQKMTSR 202
+ +A+ + + I D I + AG G ++ +++ K
Sbjct: 305 VAHAKRLL-----HELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-DISACNRLLGAFSDVGLTEKANEFHM 261
I + S Y G++ EV + K F D + +L A+ + +KAN+ +M
Sbjct: 360 RMIHLFSKYKKYGNVVEVFD-----KMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYM 414
Query: 262 LLLQKNC 268
+ + C
Sbjct: 415 EMQEVGC 421
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 99/249 (39%), Gaps = 7/249 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ + + A ++++Q + + ++Y+ ++ L + K + +
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR PD+ YN I+ + + + EM +G + + Y L+ +Y+
Sbjct: 71 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRT-AGVTPNTASYSTLLTMYVENKK 129
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E + T + +I +Y LG + D+++ +R + +Y
Sbjct: 130 FLEA-LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 206 CILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+L Y G + GE I ++ Q + ++ N ++ + EKAN +
Sbjct: 189 TLLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 264 LQKNCAPTN 272
+ P +
Sbjct: 246 QNRGIEPNS 254
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY+ ++ ++ ++A LF++++ S + + ++Y M+ Y G V ++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+KR PD ++ I A I++ ++ + D+G D + +++++
Sbjct: 314 ELKR----PDNIPRDIAIHILAGAGRIEEA-TWVFRQAIDAGEVKDITVFERMIHLF 365
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + P+ TY+ IS +D+ ++ SG D V Y ++ Y A
Sbjct: 246 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS-SGVDIDQVLYQTMIVAYERAGL 304
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LRMTKQKMTSR 202
+ +A+ + + I D I + AG G ++ +++ K
Sbjct: 305 VAHAKRLL-----HELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-DISACNRLLGAFSDVGLTEKANEFHM 261
I + S Y G++ EV + K F D + +L A+ + +KAN+ +M
Sbjct: 360 RMIHLFSKYKKYGNVVEVFD-----KMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYM 414
Query: 262 LLLQKNC 268
+ + C
Sbjct: 415 EMQEVGC 421
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 100/249 (40%), Gaps = 7/249 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ + + A ++++Q + + ++Y+ ++ L + K + +
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR +PD+ YN I+ + + + EM +G + + Y L+ +Y+
Sbjct: 71 KRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRT-AGVTPNTASYSTLLTMYVENKK 129
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E + T + +I +Y LG + D+++ +R + +Y
Sbjct: 130 FLEA-LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 206 CILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+L Y G + GE I ++ Q + ++ N ++ + EKAN +
Sbjct: 189 TLLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 264 LQKNCAPTN 272
+ P +
Sbjct: 246 QNRGIEPNS 254
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY+ ++ ++ ++A LF++++ S + + ++Y M+ Y G V ++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+KR PD ++ I A I++ ++ + D+G D + +++++
Sbjct: 314 ELKR----PDNIPRDIAIHILAGAGRIEEA-TWVFRQAIDAGEVKDITVFERMIHLF 365
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y LL +Y A+ +A LF +++ N+ N + YN MM +Y + EK +++E+
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ + + P+ TY+ IS +D+ ++ SG D V Y ++ Y A
Sbjct: 246 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS-SGVDIDQVLYQTMIVAYERAGL 304
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKS---LRMTKQKMTSR 202
+ +A+ + + I D I + AG G ++ +++ K
Sbjct: 305 VAHAKRLL-----HELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 203 NYICILSSYLMLGHLKEVGEIIDQWKQSATSDF-DISACNRLLGAFSDVGLTEKANEFHM 261
I + S Y G++ EV + K F D + +L A+ + +KAN+ +M
Sbjct: 360 RMIHLFSKYKKYGNVVEVFD-----KMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYM 414
Query: 262 LLLQKNC 268
+ + C
Sbjct: 415 EMQEVGC 421
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 98/249 (39%), Gaps = 7/249 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY+ L+ + + A ++++Q + + ++Y+ ++ L + K + +
Sbjct: 11 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 70
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
KR PD+ YN I+ + + + EM +G + Y L+ +Y+
Sbjct: 71 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRT-AGVTPTTASYSTLLTMYVENKK 129
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+ A S E + T + +I +Y LG + D+++ +R + +Y
Sbjct: 130 FLEA-LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYN 188
Query: 206 CILSSYLMLGHLKEVGEIIDQWK--QSATSDFDISACNRLLGAFSDVGLTEKANEFHMLL 263
+L Y G + GE I ++ Q + ++ N ++ + EKAN +
Sbjct: 189 TLLRVY---GDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 245
Query: 264 LQKNCAPTN 272
+ P +
Sbjct: 246 QNRGIEPNS 254
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY+ ++ ++ ++A LF++++ S + + ++Y M+ Y G V ++
Sbjct: 254 SITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 313
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
E+KR PD ++ I A I++ ++ + D+G D + +++++
Sbjct: 314 ELKR----PDNIPRDIAIHILAGAGRIEEA-TWVFRQAIDAGEVKDITVFERMIHLF 365
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY AL+ Y + A LF+++K L N L Y+ ++ Y G + V+ V E
Sbjct: 448 TYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEF 507
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIY 140
KR + PD+ Y+ I SC ++ L EM+ +G + V Y +L++ Y
Sbjct: 508 KRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMT-QAGIQPNIVTYNSLIDAY 561
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 105/241 (43%), Gaps = 7/241 (2%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
T+ +L+ + + E ++ +F +++ + + +N ++ GQ+E A ++ +
Sbjct: 308 TFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTM 367
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
+ KN+ P++ TY+ I ++ +M +SG D V Y L++IY
Sbjct: 368 RGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMK-ESGVRPDRVSYNTLIDIYAKLGR 426
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
+A + + E+ + +TY+ LI Y G ++ ++ Y
Sbjct: 427 FDDALIAC-KDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYS 485
Query: 206 CILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQ 265
++ SY G ++V + ++K++ D+ + L+ + GL E A ++LLQ
Sbjct: 486 ALIDSYSKAGMHQDVSNVFTEFKRAGLKP-DVVLYSSLIDSCCKCGLVEDA----VVLLQ 540
Query: 266 K 266
+
Sbjct: 541 E 541
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
+Y L+ +YA + A + +++ L + + YN ++ Y G+ + A + +++
Sbjct: 413 SYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKM 472
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K + +VP++ TY+ I S + V E +G D V Y +L++
Sbjct: 473 KGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFK-RAGLKPDVVLYSSLIDSCCKCG- 530
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
LV L E ++ Q +TY+ LI Y G DK++ + ++ + QK+ R+
Sbjct: 531 LVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERS 588
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 86/196 (43%), Gaps = 3/196 (1%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVAL-VVEE 84
Y+A++ Y + +A ++F+ +K++ N + YN ++ G K AL + +E
Sbjct: 237 AYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDE 296
Query: 85 IKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITAS 144
++++ V PD T+N I+ C+ + ++ EM G D + L++
Sbjct: 297 MQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQ-RRGIEQDIFTFNTLIDAVCKGG 355
Query: 145 HLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNY 204
+ A S K+I+ +TY +I Y LG ++ ++ ++ + + +Y
Sbjct: 356 QMELAASIMTTMRGKNISPNV-VTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSY 414
Query: 205 ICILSSYLMLGHLKEV 220
++ Y LG +
Sbjct: 415 NTLIDIYAKLGRFDDA 430
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Query: 41 EKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLW 100
++A ++F+ +++ + + + +N ++ + G E V E++R+ + DIFT+N
Sbjct: 288 KQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTL 347
Query: 101 ISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKS 160
I + ++ + M + S + V Y +++ Y A S + ++S
Sbjct: 348 IDAVCKGGQMELAASIMTTMRGKN-ISPNVVTYSTMIDGYGKLGCFEEA-ISLYHDMKES 405
Query: 161 ITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEV 220
+ ++Y+ LI +YA LG D K + K Y ++ +Y G K+
Sbjct: 406 GVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDA 465
Query: 221 GEIIDQWK 228
+ D+ K
Sbjct: 466 ACLFDKMK 473
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 102/252 (40%), Gaps = 53/252 (21%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TYTAL+H Y AK A ELFE + N + Y+ ++ + GQVEK + E +
Sbjct: 514 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573
Query: 86 KRKNVVPD----------------IFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDD 129
VPD + TY + + +++ +K LD MS + G +
Sbjct: 574 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-GCEPN 632
Query: 130 WVKYVNLVNIYITASHLVNAES-----------------STLVEAEKSITQRQWITYDFL 172
+ Y L++ L A+ S+L++ + +RQ + L
Sbjct: 633 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV-KRQDLASKVL 691
Query: 173 -----------IILYA----GLGNKDKIDQIWKSLRMTKQKMTSRN---YICILSSYLML 214
+++Y GL K D+ +K ++M ++K N Y ++ + M+
Sbjct: 692 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 751
Query: 215 GHLKEVGEIIDQ 226
G ++ E++++
Sbjct: 752 GKIETCLELLER 763
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 62 YNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS-CAATLNIDQVKKFLDEM 120
Y++++ + ++E L+ EE+KR +V D++TY + + S C A L I+Q +K+ +EM
Sbjct: 445 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL-IEQARKWFNEM 503
Query: 121 SCDSGGSDDWVKYVNLVNIYITASHLVNA-ESSTLVEAEKSITQRQWITYDFLIILYAGL 179
+ G + + V Y L++ Y+ A + A E + +E + +TY LI +
Sbjct: 504 R-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP--NIVTYSALIDGHCKA 560
Query: 180 GNKDKIDQIWKSLRMTKQK 198
G +K QI++ RM K
Sbjct: 561 GQVEKACQIFE--RMCGSK 577
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 27 YTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIK 86
YT ++ T++A +L + +++ N + Y M+ + +G++E ++E +
Sbjct: 706 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 765
Query: 87 RKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEM 120
K V P+ TY + I C +D L+EM
Sbjct: 766 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 16 GLPLSAKTSETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQV 75
G P T TY++L+ Y K + A ++ ++ +++ + N ++Y EM+ VG+
Sbjct: 663 GFP---ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 719
Query: 76 EKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVN 135
++ +++ ++ K P++ TY I I+ + L+ M G + ++V Y
Sbjct: 720 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG-SKGVAPNYVTYRV 778
Query: 136 LVN 138
L++
Sbjct: 779 LID 781
>gi|224114223|ref|XP_002316701.1| predicted protein [Populus trichocarpa]
gi|222859766|gb|EEE97313.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 104/229 (45%), Gaps = 10/229 (4%)
Query: 44 EELFERVKQ----SNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNL 99
EE+ E KQ S FNA +++LY SVG + V +E++ + + ++N
Sbjct: 84 EEILEDQKQYKDMSKEGFNA----RLISLYGSVGMFDHARKVFDEMRERQCARTVMSFNA 139
Query: 100 WISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEK 159
+ +C ++ N D+V+ +S + D + Y ++ + L +A S L E ++
Sbjct: 140 LLGACLSSKNFDEVEGLFRGLSKEIKIEPDLISYNTVIKAFCEMGSLDSA-VSLLDEMKR 198
Query: 160 SITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKE 219
+ IT++ L+ + G ++IW+ ++ + R+Y L + +++
Sbjct: 199 KGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEKNVEPDVRSYNAKLLGLTLEKRMED 258
Query: 220 VGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNC 268
V +++++ K D + + L+ F + G + A +++ + + C
Sbjct: 259 VVKVVEEMKSEGIQ-LDTFSYSALIRGFVNEGDLKNAKHWYLEIGRSGC 306
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 11 ERYFEGLPLSAKTSE---TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMT 67
E F GL K +Y ++ + + A L + +K+ L + + +N ++
Sbjct: 154 EGLFRGLSKEIKIEPDLISYNTVIKAFCEMGSLDSAVSLLDEMKRKGLEPDLITFNTLLH 213
Query: 68 LYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGS 127
+ + G+ + E++K KNV PD+ +YN + ++ V K ++EM + G
Sbjct: 214 GFYAKGRFVDGERIWEQMKEKNVEPDVRSYNAKLLGLTLEKRMEDVVKVVEEMKSE-GIQ 272
Query: 128 DDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQRQWITYDFLI 173
D Y L+ ++ L NA+ L E +S +R +T + LI
Sbjct: 273 LDTFSYSALIRGFVNEGDLKNAKHWYL-EIGRSGCKRDKLTLEGLI 317
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 24 SETYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVE 83
S TY L++ + + +A E+++ + + + Y+ +M L VE V ++
Sbjct: 182 SYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLM-LAFGKRDVETVVWLLR 240
Query: 84 EIKRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITA 143
E++ V P++++Y + I ++ K L +M D G D V L+ I A
Sbjct: 241 EMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKME-DEGCKPDVVTNTVLIQILCDA 299
Query: 144 SHLVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRN 203
+ +A+ + + S + +TY L+ G+ + +IW +++
Sbjct: 300 GRVSDAKD-VFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVA 358
Query: 204 YICILSSYLMLGHLKEVGEIIDQWKQSA 231
Y ++ + +G + E ++ DQ KQ
Sbjct: 359 YTAVVDALCQVGRVDEASDVFDQMKQKG 386
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 19/257 (7%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ +K +A +L+ ++ S Y ++ + G++E + +E+
Sbjct: 848 TYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEM 907
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
P+ YN+ ++ N ++V + M D G + D Y L+ TA
Sbjct: 908 LDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNM-VDQGINPDIKSYTVLIGALCTAGR 966
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
L N S + + + ITY+ LI GLG ++++ ++ + N
Sbjct: 967 L-NDSLSYFRQLTELGLEPDLITYNLLI---HGLGRSGRLEEAVSLFNDMEKSGIAPNLY 1022
Query: 206 CILSSYLMLGH---LKEVGEIIDQ-----WKQSATSDFDISACNRLLGAFSDVGLTEKAN 257
S L LG E G++ ++ WK ++ N L+G +S G T+ A
Sbjct: 1023 TYNSLILYLGKEGKAAEAGKMYEELLKNGWKP------NVFTYNALIGGYSVSGSTDNAF 1076
Query: 258 EFHMLLLQKNCAPTNAS 274
+ ++ C P +++
Sbjct: 1077 ASYGQMIVGGCPPNSST 1093
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
Query: 26 TYTALLHLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEI 85
TY ++ Y + + KA + +E +K + + + N ++ G++ V E+
Sbjct: 428 TYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHEL 487
Query: 86 KRKNVVPDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASH 145
K V PD TY + I C+ N D+ K EM ++ D + +L++ A
Sbjct: 488 KSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEM-IETRCVPDVLAVNSLIDTLYKAGR 546
Query: 146 LVNAESSTLVEAEKSITQRQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYI 205
N E ++ TY+ L+ AGLG + K+ ++ L ++M S +Y
Sbjct: 547 -GNEAWKIFHELKEMNLDPTDCTYNTLL---AGLGREGKVKEVMHLL----EEMNSNSYP 598
Query: 206 CILSSY 211
L +Y
Sbjct: 599 PNLITY 604
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Query: 32 HLYAGAKWTEKAEELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVV 91
HL K E A EL ++ + +S YN ++ + ++ + E+KR
Sbjct: 750 HLCKSKKALE-AHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCD 808
Query: 92 PDIFTYNLWISSCAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNA 149
PD FTYNL + + ++ I+ + K EM C G +V Y +++ + + L A
Sbjct: 809 PDEFTYNLILDAMGKSMRIEDMLKVQKEMHC-KGYESTYVTYNTIISGLVKSKMLYEA 865
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,016,926,415
Number of Sequences: 23463169
Number of extensions: 149241303
Number of successful extensions: 430726
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3375
Number of HSP's successfully gapped in prelim test: 2221
Number of HSP's that attempted gapping in prelim test: 395807
Number of HSP's gapped (non-prelim): 27668
length of query: 275
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 135
effective length of database: 9,074,351,707
effective search space: 1225037480445
effective search space used: 1225037480445
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)