Your job contains 1 sequence.
>023954
MSLNYSGIEIKTAHSLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHLMG
GEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQ
DYLPASVEEPVGEPQKHTYASILRVAKGQSTPSVTPQPSVSKNISPVSDWNHVPQPTTQQ
ETVSSYAYEKSWADTGEEISAVEDEEEIKSVYVRNLPPSVSESEIAEEFKKFGELSSEGV
VIRSRKDVGICYAFVEFEDMTGVRNAVEVCILMWH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023954
(275 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2172472 - symbol:AT5G43960 species:3702 "Arabi... 340 6.9e-31 1
TAIR|locus:2173567 - symbol:AT5G60980 species:3702 "Arabi... 150 1.8e-18 2
TAIR|locus:2152566 - symbol:AT5G48650 species:3702 "Arabi... 120 5.2e-12 2
TAIR|locus:2023854 - symbol:AT1G13730 species:3702 "Arabi... 148 5.2e-08 1
TAIR|locus:2026423 - symbol:AT1G69250 species:3702 "Arabi... 143 2.1e-07 1
UNIPROTKB|I3LPH5 - symbol:G3BP2 "Uncharacterized protein"... 116 1.0e-06 2
MGI|MGI:2442040 - symbol:G3bp2 "GTPase activating protein... 113 2.8e-06 2
RGD|1309571 - symbol:G3bp2 "GTPase activating protein (SH... 112 3.1e-06 2
UNIPROTKB|Q2KJ17 - symbol:G3BP2 "GTPase activating protei... 111 4.0e-06 2
UNIPROTKB|Q9UN86 - symbol:G3BP2 "Ras GTPase-activating pr... 111 4.9e-06 2
UNIPROTKB|Q13283 - symbol:G3BP1 "Ras GTPase-activating pr... 108 1.2e-05 3
UNIPROTKB|E2QYY6 - symbol:G3BP2 "Uncharacterized protein"... 107 1.2e-05 2
UNIPROTKB|E2RN45 - symbol:G3BP1 "Uncharacterized protein"... 113 1.4e-05 2
UNIPROTKB|F6XCI1 - symbol:G3BP2 "Uncharacterized protein"... 107 1.5e-05 2
UNIPROTKB|E1C769 - symbol:G3BP2 "Uncharacterized protein"... 104 1.6e-05 2
TAIR|locus:2098555 - symbol:AT3G07250 species:3702 "Arabi... 94 2.6e-05 2
MGI|MGI:1351465 - symbol:G3bp1 "GTPase activating protein... 107 4.2e-05 2
UNIPROTKB|F1LVS8 - symbol:F1LVS8 "Uncharacterized protein... 104 6.4e-05 2
POMBASE|SPBC428.12c - symbol:SPBC428.12c "RNA-binding pro... 100 6.4e-05 1
UNIPROTKB|Q5ZMN1 - symbol:G3BP1 "Uncharacterized protein"... 95 8.1e-05 2
UNIPROTKB|Q32LC7 - symbol:G3BP "Ras GTPase-activating pro... 107 8.5e-05 2
UNIPROTKB|J3KSW7 - symbol:SRSF1 "Serine/arginine-rich-spl... 98 0.00011 1
UNIPROTKB|F1RQB6 - symbol:G3BP1 "Uncharacterized protein"... 110 0.00015 2
TAIR|locus:2199700 - symbol:PAB3 "poly(A) binding protein... 117 0.00041 1
TAIR|locus:2046638 - symbol:RSZ22a "RS-containing zinc fi... 107 0.00053 1
UNIPROTKB|J3QQV5 - symbol:SRSF1 "Serine/arginine-rich-spl... 90 0.00083 1
>TAIR|locus:2172472 [details] [associations]
symbol:AT5G43960 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 EMBL:AB006703 HOGENOM:HOG000239086 EMBL:AY080755
EMBL:AY114017 IPI:IPI00523493 RefSeq:NP_199209.1 UniGene:At.24860
ProteinModelPortal:Q9FND0 SMR:Q9FND0 IntAct:Q9FND0 STRING:Q9FND0
PaxDb:Q9FND0 PRIDE:Q9FND0 EnsemblPlants:AT5G43960.1 GeneID:834419
KEGG:ath:AT5G43960 TAIR:At5g43960 eggNOG:NOG295220
InParanoid:Q9FND0 OMA:INSVESW PhylomeDB:Q9FND0
ProtClustDB:CLSN2686872 ArrayExpress:Q9FND0 Genevestigator:Q9FND0
Uniprot:Q9FND0
Length = 450
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 90/232 (38%), Positives = 127/232 (54%)
Query: 50 PQEKVPNHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELN 109
P +V ++++ E +A +YV+ V +K + L+D YS E + Q P+ E+ ED A E
Sbjct: 155 PDPQVSDYVL--EEEASDYVNAVQIKDD-LVDKYSLQEDQHQ--PQHEDY-EDEVAIEET 208
Query: 110 GSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILRVAKGXXXXXXXXXX-XXXKNISPVS 168
+ AV+ ++ A VEEPVGE K +YASIL+VAK K+ ++
Sbjct: 209 PREEVAVDVVHEHRAAPVEEPVGEKSKMSYASILKVAKEAATVPVAATQPSYNKSSQDIN 268
Query: 169 DWNH---VPQPTT-------QQETVSSYAYEK-SWADTGXXXXXXXXXXXIKSVYVRNLP 217
+W+ P P QQ S+Y + + A+ G KSVYVRNLP
Sbjct: 269 EWDQPMRTPSPQLAAPLAPIQQSNSSTYVSDYGAEAEDGSGFEDFE----FKSVYVRNLP 324
Query: 218 PSVSESEIAEEFKKFGELSSEGVVIRSRKDV-GICYAFVEFEDMTGVRNAVE 268
+S SEI EEFK FG + +GV +R+RKDV G+CYAFVEFEDMT V NA++
Sbjct: 325 SDISASEIEEEFKNFGTIKPDGVFLRTRKDVMGVCYAFVEFEDMTSVENAIK 376
Score = 213 (80.0 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 54/140 (38%), Positives = 74/140 (52%)
Query: 1 MSLNYSGIEIKTAHSLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHLMG 60
MSLN++ IE+KT +S+ESW GGVLV+VSGSV+ K+FS RR FVQTFFLAPQEK + +
Sbjct: 62 MSLNFTAIEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEK--GYFVL 119
Query: 61 GEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQ 120
++ V Q + + Q + + D EE NAV
Sbjct: 120 SDVFLFVDEGTVYYHQPSYLSEIKHEAQLNPPTRHPDPQVSDYVLEEEASDYVNAVQIKD 179
Query: 121 DYLPA-SVEEPVGEPQKHTY 139
D + S++E +PQ Y
Sbjct: 180 DLVDKYSLQEDQHQPQHEDY 199
>TAIR|locus:2173567 [details] [associations]
symbol:AT5G60980 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0009737 "response to abscisic acid stimulus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
EMBL:AB008269 InterPro:IPR018222 PROSITE:PS50177 HSSP:P33331
EMBL:AY062108 EMBL:BT003010 IPI:IPI00529722 RefSeq:NP_200906.2
UniGene:At.27353 ProteinModelPortal:Q9FME2 SMR:Q9FME2 IntAct:Q9FME2
STRING:Q9FME2 PRIDE:Q9FME2 EnsemblPlants:AT5G60980.2 GeneID:836219
KEGG:ath:AT5G60980 TAIR:At5g60980 HOGENOM:HOG000239086
InParanoid:Q9FME2 OMA:AQESHER PhylomeDB:Q9FME2
ProtClustDB:CLSN2680580 Genevestigator:Q9FME2 Uniprot:Q9FME2
Length = 460
Score = 150 (57.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 210 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 268
S+YVRNLP + +++ E FK FG + EG+ +RS K G C+ FVEFE +G ++A+E
Sbjct: 294 SIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQQGFCFGFVEFETSSGKQSALE 352
Score = 135 (52.6 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 57/201 (28%), Positives = 88/201 (43%)
Query: 1 MSLNYSGI--EIKTAHSLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEK---VP 55
+SL Y EI+TA + ES GV+V+V+G + D + R+KF Q+FFLAPQ+K V
Sbjct: 67 LSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGND-NVRKKFSQSFFLAPQDKGYFVL 125
Query: 56 NHLMGGEIQAREYVSPV-DVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQN 114
N + ++ +E + V NG D P + + V E +E P + ++
Sbjct: 126 NDVFRF-LEEKEVTAQARSVPINGTTRDVQAPIEPERVVVSHEPEVEPEPVASIEE--ED 182
Query: 115 AVNAAQDYLPASVEE-------PVGEPQKHTYASILRVAKGXXXXXXXXXXXXXKNISPV 167
N A+ Y P+ +E P+ P + ++ IL V +G SP
Sbjct: 183 LDNVAEVYDPSDKDEGVVVDVEPIEPPTQISHNEILSVPQGDAPKHSYASILKQMKSSPA 242
Query: 168 SDWNHV------PQPTTQQET 182
HV P P Q+ T
Sbjct: 243 PT-THVARNKPRPAPVNQKLT 262
>TAIR|locus:2152566 [details] [associations]
symbol:AT5G48650 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222
PROSITE:PS50177 EMBL:BT002864 EMBL:BT005640 IPI:IPI00523841
RefSeq:NP_199676.2 UniGene:At.29836 ProteinModelPortal:Q84JH2
SMR:Q84JH2 IntAct:Q84JH2 STRING:Q84JH2 PaxDb:Q84JH2 PRIDE:Q84JH2
EnsemblPlants:AT5G48650.1 GeneID:834922 KEGG:ath:AT5G48650
TAIR:At5g48650 eggNOG:NOG292401 InParanoid:Q84JH2 OMA:FNANIDM
PhylomeDB:Q84JH2 ProtClustDB:CLSN2918367 ArrayExpress:Q84JH2
Genevestigator:Q84JH2 Uniprot:Q84JH2
Length = 458
Score = 120 (47.3 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 55/227 (24%), Positives = 100/227 (44%)
Query: 56 NHLMGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNA 115
N + G E A V+PV + + +D+ + + L VPE N + E+ + A
Sbjct: 163 NGMKGSEQAACVSVNPVCKEVSKPLDNENAKDNVL--VPEIAN---EVARTEITCK-EVA 216
Query: 116 VNAAQDYLPASVEEPVGEPQKHTYASILRVAKGXXXXXXXXXXXXXKNISPVSDWNHVPQ 175
++ ++Y P ++ + + K +YAS+L+V K K P + P
Sbjct: 217 DDSQKNYDP---DDGLADAPKKSYASVLKVTKDKFGVPAVSLPSPKK--IPKDQEHQAPS 271
Query: 176 -PTTQQ------ETVSSYAYEKSWADTGXXXXXXXXXXXIK-------SVYVRNLPPSVS 221
P+T Q + SS + +DT + S+YVR+LP + +
Sbjct: 272 DPSTGQILKDQGQQASSDPSQVIESDTVSESVDASENGHNQEAVAEGTSIYVRHLPFNAN 331
Query: 222 ESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 268
+ EFK+FG +++ G+ + +++ +G Y FVEFE+ A+E
Sbjct: 332 IDMLEAEFKQFGAITNGGIQVINQRGLGYPYGFVEFEEADAAHRAIE 378
Score = 109 (43.4 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 9 EIKTAHSLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEK 53
EI + + ES NGG L+ V+G + + S RRKF QTFFLAPQEK
Sbjct: 79 EITSYDTQESHNGGFLLFVTGYFTLNERS-RRKFTQTFFLAPQEK 122
>TAIR|locus:2023854 [details] [associations]
symbol:AT1G13730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
GO:GO:0006810 EMBL:AC027656 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HSSP:P33331
HOGENOM:HOG000239086 EMBL:AY058169 EMBL:AY140039 EMBL:BT006581
IPI:IPI00531419 PIR:F86270 RefSeq:NP_563932.1 UniGene:At.15556
ProteinModelPortal:Q9LMX6 SMR:Q9LMX6 IntAct:Q9LMX6 STRING:Q9LMX6
PaxDb:Q9LMX6 PRIDE:Q9LMX6 EnsemblPlants:AT1G13730.1 GeneID:837933
KEGG:ath:AT1G13730 TAIR:At1g13730 eggNOG:NOG331084
InParanoid:Q9LMX6 OMA:DIAHEES PhylomeDB:Q9LMX6
ProtClustDB:CLSN2687795 ArrayExpress:Q9LMX6 Genevestigator:Q9LMX6
Uniprot:Q9LMX6
Length = 428
Score = 148 (57.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 68/281 (24%), Positives = 122/281 (43%)
Query: 1 MSLNY--SGIEIKTAHSLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEK----- 53
MS +Y S I+I TA S S+ GV+ +V+G + VK+ R +F Q+FFL P
Sbjct: 67 MSFDYEISKIQILTADSQASYMNGVVTLVTGLLTVKE-GQRMRFSQSFFLVPLNGSYFVL 125
Query: 54 ------VPNHLMGGEIQAREY--VSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPA 105
V + ++ E +E V P V+ +D+ + P Q PE++ E++
Sbjct: 126 NDVFRYVADEIVEPEANKKEVEEVIPQVVQPTEQVDEVAEPVTIPTQQPEAKQTTENTVK 185
Query: 106 EELNGSLQNAVNAAQDYLPASVEEPVGEPQKHTYASILR-VAKGXXXXXXXXXXXXXKNI 164
+ +D + V P+K ++A I++ +A+ K+
Sbjct: 186 KPERAVANGHPKTQEDNVVNDKSNGVDAPKK-SFAHIVQDLAQNGATFNAKASPAKPKS- 243
Query: 165 SPVSDWNHVPQPTTQQETVS-SYAYEKSWADTGXXXXXXXXXXXIKSVYVRNLPPSVSES 223
PV+ +P+ +E+ + + E S A T +++V NL +
Sbjct: 244 KPVT------KPSAARESKAPAPVSEHSSAATIDQQAEGY------TIFVANLLMDATPE 291
Query: 224 EIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVR 264
++ E FK FG ++ +G+ +RS + G C+ FV F V+
Sbjct: 292 QLNETFKGFGAITKDGIQVRSYRLKGNCFGFVTFASAEAVK 332
>TAIR|locus:2026423 [details] [associations]
symbol:AT1G69250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 EMBL:AC008262 EMBL:AC018364
InterPro:IPR018222 PROSITE:PS50177 HOGENOM:HOG000239086
EMBL:BT006208 IPI:IPI00537284 PIR:E96716 RefSeq:NP_177085.1
UniGene:At.25325 ProteinModelPortal:Q9LDI9 SMR:Q9LDI9 STRING:Q9LDI9
PRIDE:Q9LDI9 EnsemblPlants:AT1G69250.1 GeneID:843256
KEGG:ath:AT1G69250 TAIR:At1g69250 InParanoid:Q9LDI9 OMA:PIKENGI
PhylomeDB:Q9LDI9 ProtClustDB:CLSN2682528 Genevestigator:Q9LDI9
Uniprot:Q9LDI9
Length = 427
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 67/279 (24%), Positives = 111/279 (39%)
Query: 9 EIKTAHSLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEK--VPNHLMGGEIQAR 66
E+ + S S G+ +MV G + KD + RRKF Q F+LA Q V N ++ Q
Sbjct: 75 EVLSVDSQNSLEDGIFIMVIGFMTGKD-NQRRKFSQMFYLARQNTLVVLNDMLRYVDQED 133
Query: 67 --------EYVSPVDVKQNGL--IDDYSFPEQRLQQVPESENILEDSPAEEL-NGSLQNA 115
E V+ + +GL + ++ + V +S N + A L NG ++ +
Sbjct: 134 SSTTETPCEPVTEIVRPADGLKKAEKTELKQKNVASVEKSVNAAVEKNAAPLDNGKMKQS 193
Query: 116 VNAAQDYLPASVEEPVGEPQ----KHTYASILRVAKGXXXXXXXXXXXXXKNISPVSDWN 171
A + V EP PQ K ++A I+ G +PV
Sbjct: 194 EKAV---ITQKVTEPDAAPQPDGAKRSFADIV----GSMAKNAAPFQVKSPVQAPVQKPK 246
Query: 172 HVPQPTTQQETVSSYAYEKSWADTGXXXXXXXXXXXIKSVYVRNLPPSVSESEIAEEFKK 231
+V QP KS S++V NLP + ++ E FK
Sbjct: 247 YVGQPRAAAAPQKPAYVSKSIKKNDQKVIEVPGT----SIFVANLPLNAMPPQLFELFKD 302
Query: 232 FGELSSEGVVIRSRKDVG--ICYAFVEFEDMTGVRNAVE 268
FG + G+ +RS + +C+ F+ FE + V++ ++
Sbjct: 303 FGPIKENGIQVRSSRGNANPVCFGFISFETVASVQSVLQ 341
>UNIPROTKB|I3LPH5 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 CTD:9908 OMA:MEQNESD EMBL:CU467763
RefSeq:XP_003357027.1 Ensembl:ENSSSCT00000026131 GeneID:100621975
KEGG:ssc:100621975 Uniprot:I3LPH5
Length = 448
Score = 116 (45.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 43/149 (28%), Positives = 63/149 (42%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
+SLN+S K H + + + GV+V V G + RKF+QTF LAP+ VPN
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS-NSGQPERKFMQTFVLAPEGSVPNKF 124
Query: 59 MGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNA--- 115
R Y V +D+ S E +++ E + P +E N A
Sbjct: 125 YVHNDMFR-YEDEVFGDSEPELDEES--EDEVEEEQEERQPTPE-PVQETNSGYYEAHPV 180
Query: 116 VNAAQDYLPASVEEPVGEPQKHTYASILR 144
N ++ L S EP EP+ T L+
Sbjct: 181 TNGIEEPLEESSHEPEPEPESETKTEELK 209
Score = 62 (26.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVG---ICYAFVEFEDMTGVR 264
++V NLP + E+E+ E F FG + V +R + K VG + FV F+D V+
Sbjct: 299 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQ 352
>MGI|MGI:2442040 [details] [associations]
symbol:G3bp2 "GTPase activating protein (SH3 domain) binding
protein 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360 EMBL:U65313
MGI:MGI:2442040 GO:GO:0005737 GO:GO:0007264 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0051028 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 CTD:9908 OMA:MEQNESD
EMBL:AF145285 EMBL:AK145697 IPI:IPI00124245 IPI:IPI00331295
RefSeq:NP_001074263.1 RefSeq:NP_001074266.1 RefSeq:NP_035946.2
UniGene:Mm.290530 UniGene:Mm.473827 ProteinModelPortal:P97379
SMR:P97379 STRING:P97379 PhosphoSite:P97379 PaxDb:P97379
PRIDE:P97379 Ensembl:ENSMUST00000113127 Ensembl:ENSMUST00000164378
Ensembl:ENSMUST00000167918 Ensembl:ENSMUST00000169094 GeneID:23881
KEGG:mmu:23881 InParanoid:P97379 ChiTaRS:G3BP2 NextBio:303611
Bgee:P97379 Genevestigator:P97379 GermOnline:ENSMUSG00000029405
Uniprot:P97379
Length = 482
Score = 113 (44.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 42/149 (28%), Positives = 63/149 (42%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
+SLN+S K H + + + GV+V V G + RKF+QTF LAP+ VPN
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS-NSGQPERKFMQTFVLAPEGSVPNKF 124
Query: 59 MGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNA--- 115
R Y V +D+ S E +++ E + E N + +A
Sbjct: 125 YVHNDMFR-YEDEVFGDSEPELDEES--EDEVEEEQEDRQPSPEPVQENANSAYYDAHPV 181
Query: 116 VNAAQDYLPASVEEPVGEPQKHTYASILR 144
N ++ L S EP EP+ T L+
Sbjct: 182 TNGIEEPLEESSHEPEPEPESETKTEELK 210
Score = 62 (26.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVG---ICYAFVEFEDMTGVR 264
++V NLP + E+E+ E F FG + V +R + K VG + FV F+D V+
Sbjct: 333 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQ 386
Score = 39 (18.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 210 SVYVRNLPPS--VSESEIAEEFK 230
SV +NLPPS VS S I K
Sbjct: 248 SVTSKNLPPSGTVSSSGIPPHVK 270
>RGD|1309571 [details] [associations]
symbol:G3bp2 "GTPase activating protein (SH3 domain) binding
protein 2" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 RGD:1309571 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 CTD:9908 EMBL:CH474060
EMBL:BC079225 IPI:IPI00464529 RefSeq:NP_001014011.1
UniGene:Rn.198360 MINT:MINT-7138399 STRING:Q6AY21
Ensembl:ENSRNOT00000003346 GeneID:305240 KEGG:rno:305240
UCSC:RGD:1309571 NextBio:654241 Genevestigator:Q6AY21
Uniprot:Q6AY21
Length = 449
Score = 112 (44.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 42/149 (28%), Positives = 62/149 (41%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
+SLN+S K H + + + GV+V V G + RKF+QTF LAP+ VPN
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS-NSGQPERKFMQTFVLAPEGSVPNKF 124
Query: 59 MGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNA--- 115
R Y V +D+ S E +++ E + E N + A
Sbjct: 125 YVHNDMFR-YEDEVFGDSEPELDEES--EDEVEEEQEDRQPSPEPVQENANSAYYEAHPV 181
Query: 116 VNAAQDYLPASVEEPVGEPQKHTYASILR 144
N ++ L S EP EP+ T L+
Sbjct: 182 TNGIEEPLEESSHEPEPEPESETKTEELK 210
Score = 62 (26.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVG---ICYAFVEFEDMTGVR 264
++V NLP + E+E+ E F FG + V +R + K VG + FV F+D V+
Sbjct: 300 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQ 353
>UNIPROTKB|Q2KJ17 [details] [associations]
symbol:G3BP2 "GTPase activating protein (SH3 domain)
binding protein 2" species:9913 "Bos taurus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 CTD:9908 OMA:MEQNESD
EMBL:DAAA02018118 EMBL:BC105567 IPI:IPI00708814
RefSeq:NP_001039920.1 UniGene:Bt.87528 STRING:Q2KJ17
Ensembl:ENSBTAT00000018663 GeneID:539249 KEGG:bta:539249
NextBio:20877877 Uniprot:Q2KJ17
Length = 449
Score = 111 (44.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 42/149 (28%), Positives = 61/149 (40%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
+SLN+S K H + + + GV+V V G + RKF+QTF LAP+ VPN
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS-NSGQPERKFMQTFVLAPEGSVPNKF 124
Query: 59 MGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNA--- 115
R Y V +D+ S E +++ E + E N A
Sbjct: 125 YVHNDMFR-YEDEVFGDSEPELDEES--EDEVEEEQEERQPSPEPVQENANSGYYEAHPV 181
Query: 116 VNAAQDYLPASVEEPVGEPQKHTYASILR 144
N ++ L S EP EP+ T L+
Sbjct: 182 TNGIEEPLEESSHEPEPEPESETKTEELK 210
Score = 62 (26.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVG---ICYAFVEFEDMTGVR 264
++V NLP + E+E+ E F FG + V +R + K VG + FV F+D V+
Sbjct: 300 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQ 353
>UNIPROTKB|Q9UN86 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0007253 "cytoplasmic sequestering of NF-kappaB"
evidence=NAS] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=NAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=TAS] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=TAS] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0007265 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0051056
GO:GO:0003723 EMBL:CH471057 GO:GO:0030159 GO:GO:0051028
InterPro:IPR018222 PROSITE:PS50177 GO:GO:0007253 eggNOG:NOG324333
HOGENOM:HOG000220838 HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0
EMBL:AF145284 EMBL:AB014560 EMBL:AF051311 EMBL:AF053535
EMBL:AK291786 EMBL:BC011731 IPI:IPI00009057 IPI:IPI00179890
RefSeq:NP_036429.2 RefSeq:NP_987100.1 RefSeq:NP_987101.1
UniGene:Hs.303676 ProteinModelPortal:Q9UN86 SMR:Q9UN86
IntAct:Q9UN86 MINT:MINT-3082700 STRING:Q9UN86 PhosphoSite:Q9UN86
DMDM:116242482 PaxDb:Q9UN86 PRIDE:Q9UN86 Ensembl:ENST00000357854
Ensembl:ENST00000359707 Ensembl:ENST00000395719 GeneID:9908
KEGG:hsa:9908 UCSC:uc003hir.3 UCSC:uc003hit.3 CTD:9908
GeneCards:GC04M076567 HGNC:HGNC:30291 HPA:HPA018304 HPA:HPA018425
neXtProt:NX_Q9UN86 PharmGKB:PA162389134 InParanoid:Q9UN86
OMA:MEQNESD PhylomeDB:Q9UN86 GenomeRNAi:9908 NextBio:37365
ArrayExpress:Q9UN86 Bgee:Q9UN86 CleanEx:HS_G3BP2
Genevestigator:Q9UN86 GermOnline:ENSG00000138757 Uniprot:Q9UN86
Length = 482
Score = 111 (44.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 42/149 (28%), Positives = 61/149 (40%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
+SLN+S K H + + + GV+V V G + RKF+QTF LAP+ VPN
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS-NSGQPERKFMQTFVLAPEGSVPNKF 124
Query: 59 MGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQNA--- 115
R Y V +D+ S E +++ E + E N A
Sbjct: 125 YVHNDMFR-YEDEVFGDSEPELDEES--EDEVEEEQEERQPSPEPVQENANSGYYEAHPV 181
Query: 116 VNAAQDYLPASVEEPVGEPQKHTYASILR 144
N ++ L S EP EP+ T L+
Sbjct: 182 TNGIEEPLEESSHEPEPEPESETKTEELK 210
Score = 62 (26.9 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVG---ICYAFVEFEDMTGVR 264
++V NLP + E+E+ E F FG + V +R + K VG + FV F+D V+
Sbjct: 333 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQ 386
>UNIPROTKB|Q13283 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007265 "Ras
protein signal transduction" evidence=TAS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 EMBL:U32519 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0007265 GO:GO:0003677
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004003
GO:GO:0090305 GO:GO:0004519 InterPro:IPR018222 PROSITE:PS50177
GO:GO:0004004 CTD:10146 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OMA:VVSNDME OrthoDB:EOG4XWFZ0 EMBL:BC006997
IPI:IPI00012442 RefSeq:NP_005745.1 RefSeq:NP_938405.1
UniGene:Hs.587054 PDB:3Q90 PDBsum:3Q90 ProteinModelPortal:Q13283
SMR:Q13283 IntAct:Q13283 MINT:MINT-5002789 STRING:Q13283
PhosphoSite:Q13283 DMDM:14916572 PaxDb:Q13283 PeptideAtlas:Q13283
PRIDE:Q13283 DNASU:10146 Ensembl:ENST00000356245
Ensembl:ENST00000394123 GeneID:10146 KEGG:hsa:10146 UCSC:uc003lum.3
GeneCards:GC05P151151 HGNC:HGNC:30292 HPA:HPA004052 MIM:608431
neXtProt:NX_Q13283 PharmGKB:PA162389105 InParanoid:Q13283
PhylomeDB:Q13283 ChiTaRS:G3BP1 GenomeRNAi:10146 NextBio:38391
ArrayExpress:Q13283 Bgee:Q13283 CleanEx:HS_G3BP1
Genevestigator:Q13283 GermOnline:ENSG00000145907 Uniprot:Q13283
Length = 466
Score = 108 (43.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
MS N++ K H + + N GV+V V G + + A R+F+QTF LAP+ V N
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN-QALRRFMQTFVLAPEGSVANKF 124
Query: 59 -MGGEI---QAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQN 114
+ +I Q + V Q ++ PE+R QQ PE + +DS G+ +
Sbjct: 125 YVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEER-QQTPEV--VPDDS------GTFYD 175
Query: 115 AVNAAQDYLPASVEEPVGEPQ 135
+ D + +EEPV EP+
Sbjct: 176 QAVVSND-MEEHLEEPVAEPE 195
Score = 54 (24.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC-YAFVEFEDMTGVRNAV 267
+++ NLP V +SE+ + F+ +G + V +R + + FV F+D V+ +
Sbjct: 342 LFIGNLPHEVDKSELKDFFQSYGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVL 395
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 18/58 (31%), Positives = 23/58 (39%)
Query: 166 PVSD-WNHVPQPTTQQETVSSYAYEKSW---ADTGXXXXXXXXXXXIKSVYVRNLPPS 219
PVS+ P+P + ET A + S AD SV +NLPPS
Sbjct: 206 PVSEIQEEKPEPVLE-ETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPS 262
>UNIPROTKB|E2QYY6 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 CTD:9908
RefSeq:XP_855995.1 ProteinModelPortal:E2QYY6
Ensembl:ENSCAFT00000013317 GeneID:478429 KEGG:cfa:478429
NextBio:20853768 Uniprot:E2QYY6
Length = 449
Score = 107 (42.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/149 (27%), Positives = 63/149 (42%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
+SLN+S K H + + + GV+V V G + RKF+QTF LAP+ VPN
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS-NSGQPERKFMQTFVLAPEGSVPNKF 124
Query: 59 MGGEIQAREYVSPVDVKQNGLIDDYS---FPEQRLQQVPESENILEDSPAEELNGSLQNA 115
R Y V +D+ S E++ ++ P E + E++ +
Sbjct: 125 YVHNDMFR-YEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENADSGYYEA--HPV 181
Query: 116 VNAAQDYLPASVEEPVGEPQKHTYASILR 144
N ++ L S EP EP T L+
Sbjct: 182 ANGIEEPLEESSHEPEPEPDSETKTEELK 210
Score = 62 (26.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVG---ICYAFVEFEDMTGVR 264
++V NLP + E+E+ E F FG + V +R + K VG + FV F+D V+
Sbjct: 300 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQ 353
>UNIPROTKB|E2RN45 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:VVSNDME EMBL:AAEX03003083
Ensembl:ENSCAFT00000028303 Uniprot:E2RN45
Length = 441
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 46/155 (29%), Positives = 70/155 (45%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
MS N++ K H + + N GV+V V G + + A R+F+QTF LAP+ V N
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN-QALRRFMQTFVLAPEGSVANKF 124
Query: 59 -MGGEI---QAREYVSPVDVKQNGLIDDYSFPEQRLQQVPE-----SENILEDSPAEELN 109
+ +I Q + V Q ++ PE+R QQ PE S + S + +L
Sbjct: 125 YVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEER-QQTPEVVPDDSGTFYDQSVSNDLE 183
Query: 110 GSLQNAVNAAQ-DYLPASVEEPVGEPQKHTYASIL 143
L+ V + D P +EPV E Q+ +L
Sbjct: 184 EHLEEPVAEPEPDPEPEPEQEPVSEIQEEKSEPVL 218
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC-YAFVEFEDMTGVRNAV 267
+++ NLP V +SE+ + F+ +G + V +R + + FV F+D V+ +
Sbjct: 341 LFIGNLPHEVDKSELKDFFQSYGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVL 394
>UNIPROTKB|F6XCI1 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:MEQNESD Ensembl:ENSCAFT00000013317
EMBL:AAEX03016672 EMBL:AAEX03016673 Uniprot:F6XCI1
Length = 490
Score = 107 (42.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 41/149 (27%), Positives = 63/149 (42%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
+SLN+S K H + + + GV+V V G + RKF+QTF LAP+ VPN
Sbjct: 74 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS-NSGQPERKFMQTFVLAPEGSVPNKF 132
Query: 59 MGGEIQAREYVSPVDVKQNGLIDDYS---FPEQRLQQVPESENILEDSPAEELNGSLQNA 115
R Y V +D+ S E++ ++ P E + E++ +
Sbjct: 133 YVHNDMFR-YEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENADSGYYEA--HPV 189
Query: 116 VNAAQDYLPASVEEPVGEPQKHTYASILR 144
N ++ L S EP EP T L+
Sbjct: 190 ANGIEEPLEESSHEPEPEPDSETKTEELK 218
Score = 62 (26.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVG---ICYAFVEFEDMTGVR 264
++V NLP + E+E+ E F FG + V +R + K VG + FV F+D V+
Sbjct: 341 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQ 394
>UNIPROTKB|E1C769 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 CTD:9908 OMA:MEQNESD EMBL:AADN02008996
IPI:IPI00597302 RefSeq:XP_420536.2 UniGene:Gga.10005
ProteinModelPortal:E1C769 Ensembl:ENSGALT00000017688 GeneID:422576
KEGG:gga:422576 NextBio:20825190 Uniprot:E1C769
Length = 482
Score = 104 (41.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 40/143 (27%), Positives = 62/143 (43%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
MSL +S K H + + + GV+V V G + + RKF+QTF LAP+ VPN
Sbjct: 66 MSLQFSECHTKIRHVDAHATLSDGVVVQVMGELS-NNGQPMRKFMQTFVLAPEGSVPNKF 124
Query: 59 MGGEIQAREYVSPVDVKQNGLIDDYS---FPEQRLQQVPESENILEDSPAEELNGSLQNA 115
R Y V G +D+ S E++ ++ P E + E++ +
Sbjct: 125 YVHNDIFR-YEDEVFGDSEGELDEESEEEVEEEQEERQPSPEPVQENASSTYYEN--HPV 181
Query: 116 VNAAQDYLPASVEEPVGEPQKHT 138
N ++ L S EP E + T
Sbjct: 182 TNGIEEALEESSHEPEPELESET 204
Score = 65 (27.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIR-SRKDVG---ICYAFVEFEDMTGVR 264
++V NLP + ESE+ E F FG + V +R + K VG + FV F+D V+
Sbjct: 333 LFVGNLPHDIDESELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQ 386
>TAIR|locus:2098555 [details] [associations]
symbol:AT3G07250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0009506 EMBL:CP002686 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
InterPro:IPR012463 Pfam:PF07897 InterPro:IPR018222 PROSITE:PS50177
IPI:IPI00518200 RefSeq:NP_187381.2 UniGene:At.53212
ProteinModelPortal:F4JED3 SMR:F4JED3 PRIDE:F4JED3
EnsemblPlants:AT3G07250.1 GeneID:819913 KEGG:ath:AT3G07250
Uniprot:F4JED3
Length = 1294
Score = 94 (38.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 186 YAYEKS-----WADTGXXXXXXXXXXXIKS-VYVRNLPPSVSESEIAEEFKKFGELSSEG 239
YAY K+ ADTG + + V++LPP+ + + + FK+FG +
Sbjct: 521 YAYNKNIKADAGADTGNGNSQDSQAITEDAHIRVKDLPPNATVALVESVFKQFGPIKKGR 580
Query: 240 VVIRSRKDVGICYAFVEFEDMTGVRNAVE 268
+ + + + YAFVEFE+ + A++
Sbjct: 581 IRVINPANSNYWYAFVEFEEADAAKRAIQ 609
Score = 94 (38.1 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 210 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 268
++ V+NLP + + + + FK+FGE+ GV +R+++ Y FVEF++ + A++
Sbjct: 1077 AICVKNLPLNATIALVENAFKQFGEIRRGGVEVRNKRSFS--YGFVEFKEENAAQRAIK 1133
Score = 93 (37.8 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 210 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 269
+V+V+NLPP+V+ + FK+FG + GV + S + VG + V+F AV
Sbjct: 1197 AVHVKNLPPNVTTDWVENAFKQFGPIKRGGVQV-SNRGVGNWFGNVKFVHAAAAERAVNP 1255
Query: 270 CILM 273
+L+
Sbjct: 1256 QVLL 1259
Score = 84 (34.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 4 NYSGIEIKTAHSLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEK 53
++ ++I + S +S G+LV+V G + + AR F Q FFL PQEK
Sbjct: 335 SFDSVKITSVTSQDSLKQGILVVVYGYLTFNERPARH-FTQVFFLVPQEK 383
Score = 71 (30.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 5 YSGIEIKTAHSLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEK 53
+ +E+ + S +S + G+ V V G + AR F Q F APQEK
Sbjct: 1002 FDSVEVTSVMSQDSHDKGIRVAVDGYFTFNERPARN-FTQNFTFAPQEK 1049
Score = 37 (18.1 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 80 IDDY-SFPEQRLQQVPESENILEDSPAEELNGSLQNAVNAAQD 121
ID Y ++ E++ ++NI D+ A+ NG+ Q++ +D
Sbjct: 510 IDGYRTYVEKKYAY---NKNIKADAGADTGNGNSQDSQAITED 549
Score = 36 (17.7 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 64 QAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAE 106
+++E S + ++ + D+S+ E+ +V E E+ L++ E
Sbjct: 871 KSKEEQSKLQEEEGEIQVDHSWEEEH-SKVLEEESKLQEEAVE 912
>MGI|MGI:1351465 [details] [associations]
symbol:G3bp1 "GTPase activating protein (SH3 domain) binding
protein 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IMP] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1351465 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006810 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0090305
GO:GO:0004386 GO:GO:0090090 GO:GO:0004519 GO:GO:0010494
InterPro:IPR018222 PROSITE:PS50177 CTD:10146 eggNOG:NOG324333
HOVERGEN:HBG007211 OMA:VVSNDME OrthoDB:EOG4XWFZ0 ChiTaRS:G3BP1
EMBL:AB001927 EMBL:BC021156 IPI:IPI00130095 RefSeq:NP_038744.1
UniGene:Mm.380129 UniGene:Mm.39631 UniGene:Mm.405739
ProteinModelPortal:P97855 SMR:P97855 STRING:P97855
PhosphoSite:P97855 PaxDb:P97855 PRIDE:P97855
Ensembl:ENSMUST00000018727 GeneID:27041 KEGG:mmu:27041
InParanoid:P97855 NextBio:304965 Bgee:P97855 Genevestigator:P97855
GermOnline:ENSMUSG00000018583 Uniprot:P97855
Length = 465
Score = 107 (42.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 42/141 (29%), Positives = 65/141 (46%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
MS N++ K H + + N GV+V V G + + A R+F+QTF LAP+ V N
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN-QALRRFMQTFVLAPEGSVANKF 124
Query: 59 -MGGEI---QAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQN 114
+ +I Q + V Q ++ PE+R QQ PE ++ D + Q
Sbjct: 125 YVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEER-QQTPE---VVPDDSGTFYD---QT 177
Query: 115 AVNAAQDYLPASVEEPVGEPQ 135
N +++L V EP EP+
Sbjct: 178 VSNDLEEHLEEPVVEPEPEPE 198
Score = 57 (25.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC-YAFVEFEDMTGVRNAV 267
+++ NLP V +SE+ + F+ FG + V +R + + FV F+D V+ +
Sbjct: 340 LFIGNLPHEVDKSELKDFFQNFGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVL 393
>UNIPROTKB|F1LVS8 [details] [associations]
symbol:F1LVS8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 IPI:IPI00561182
Ensembl:ENSRNOT00000002166 Uniprot:F1LVS8
Length = 439
Score = 104 (41.7 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 44/142 (30%), Positives = 64/142 (45%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
+SLN+S K H + + + GV+V V G + RKF+QTF LAP+ VPN
Sbjct: 70 LSLNFSECHTKICHVDAHATLSDGVVVQVMGLLS-NSGQPERKFMQTFVLAPEGSVPNKF 128
Query: 59 MGGEIQAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPA--EELNGSLQNA- 115
R Y ++ + D S PE L +V E + + SP E N + +A
Sbjct: 129 YVHNDMFR-Y-------EDEVFGD-SEPE--LDEVEEEQENRQPSPEVQENANSAYYDAH 177
Query: 116 --VNAAQDYLPASVEEPVGEPQ 135
N ++ L S EP EP+
Sbjct: 178 PETNGIEEPLEESSHEPEPEPE 199
Score = 58 (25.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVG---ICYAFVEFED 259
++V NLP + E+E+ E F FG + + + K VG + FV F+D
Sbjct: 292 LFVGNLPHDIDENELKEFFMHFGNVVELHI---NTKGVGGKLPNFGFVVFDD 340
>POMBASE|SPBC428.12c [details] [associations]
symbol:SPBC428.12c "RNA-binding protein" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 PomBase:SPBC428.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0000166 EMBL:CU329671 Gene3D:3.30.70.330 GO:GO:0003723
HSSP:Q9UNP9 PIR:T40464 RefSeq:NP_595190.1 ProteinModelPortal:O94359
EnsemblFungi:SPBC428.12c.1 GeneID:2540852 KEGG:spo:SPBC428.12c
eggNOG:NOG331137 OrthoDB:EOG4TJ03G NextBio:20801968 Uniprot:O94359
Length = 116
Score = 100 (40.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 210 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 268
+V+V NL PSV+ES + F FGE+ S + R K V YAFVEF++ + A+E
Sbjct: 7 TVHVGNLAPSVTESLLYNAFIPFGEIISVALH-RKEKAVDRSYAFVEFDEPEDAKEAME 64
>UNIPROTKB|Q5ZMN1 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
CTD:10146 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0
EMBL:AADN02028650 EMBL:AADN02028651 EMBL:AADN02028652 EMBL:AJ719353
IPI:IPI00593144 RefSeq:NP_001006150.1 UniGene:Gga.4912
STRING:Q5ZMN1 Ensembl:ENSGALT00000006615 GeneID:416265
KEGG:gga:416265 InParanoid:Q5ZMN1 OMA:RNDGGEN NextBio:20819751
Uniprot:Q5ZMN1
Length = 472
Score = 95 (38.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 39/143 (27%), Positives = 63/143 (44%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
+SLN+ K H + + N GV+V V G + + R+F+QTF LAP+ V N
Sbjct: 66 LSLNFKDCHTKIRHVDAHATLNDGVVVQVMGELS-NNMQPVRRFMQTFVLAPEGSVANKF 124
Query: 59 -MGGEI--QAREYVSPVDVKQ-NGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQN 114
+ +I E D + ++ PE+R QQ PE+ + D ++ N
Sbjct: 125 YVHNDIFRYQDEVFGDSDTEPPEESEEEGEEPEER-QQTPEA---VPDDTGAYYEQTVSN 180
Query: 115 AVNAAQDYLPASVE-EPVGEPQK 136
+ + A E EP EP++
Sbjct: 181 DIEEHLEETTAEAEPEPEPEPEQ 203
Score = 68 (29.0 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGE-LSSEGVVIRSRKDVG---ICYAFVEFED 259
++V NLP V +SE+ + F+K G L+ G V+ R + G + FV F+D
Sbjct: 341 LFVGNLPHDVDKSELKDFFQKLGSSLAGYGNVVELRINSGGKLPNFGFVVFDD 393
>UNIPROTKB|Q32LC7 [details] [associations]
symbol:G3BP "Ras GTPase-activating protein-binding protein
1" species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0090305 GO:GO:0004386 GO:GO:0004519 InterPro:IPR018222
PROSITE:PS50177 EMBL:BC109645 IPI:IPI00693236 RefSeq:NP_001032700.1
UniGene:Bt.5197 ProteinModelPortal:Q32LC7 STRING:Q32LC7
PRIDE:Q32LC7 Ensembl:ENSBTAT00000027067 GeneID:534214
KEGG:bta:534214 CTD:10146 eggNOG:NOG324333
GeneTree:ENSGT00390000011365 HOGENOM:HOG000220838
HOVERGEN:HBG007211 InParanoid:Q32LC7 OMA:VVSNDME OrthoDB:EOG4XWFZ0
NextBio:20876309 ArrayExpress:Q32LC7 Uniprot:Q32LC7
Length = 465
Score = 107 (42.7 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 41/141 (29%), Positives = 65/141 (46%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
MS N++ K H + + N GV+V V G + + A R+F+QTF LAP+ V N
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN-QALRRFMQTFVLAPEGSVANKF 124
Query: 59 -MGGEI---QAREYVSPVDVKQNGLIDDYSFPEQRLQQVPESENILEDSPAEELNGSLQN 114
+ +I Q + + Q ++ PE+R QQ PE ++ D + Q
Sbjct: 125 YVHNDIFRYQDEVFGGFITEPQEESEEEVEEPEER-QQTPE---VVPDDSGTFYD---QT 177
Query: 115 AVNAAQDYLPASVEEPVGEPQ 135
N +++L V EP EP+
Sbjct: 178 VSNDLEEHLEEPVAEPEPEPE 198
Score = 54 (24.1 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC-YAFVEFEDMTGVRNAV 267
+++ NLP V +SE+ + F+ +G + V +R + + FV F+D V+ +
Sbjct: 341 LFIGNLPHEVDKSELKDFFQNYGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVL 394
>UNIPROTKB|J3KSW7 [details] [associations]
symbol:SRSF1 "Serine/arginine-rich-splicing factor 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:10780 ChiTaRS:SRSF1 EMBL:AC015813
ProteinModelPortal:J3KSW7 Ensembl:ENST00000585096 Uniprot:J3KSW7
Length = 73
Score = 98 (39.6 bits), Expect = 0.00011, P = 0.00011
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVEV 269
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED +AV +
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFEDPRDAEDAVHI 73
>UNIPROTKB|F1RQB6 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:VVSNDME EMBL:CU570659
Ensembl:ENSSSCT00000018595 Uniprot:F1RQB6
Length = 464
Score = 110 (43.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 45/158 (28%), Positives = 71/158 (44%)
Query: 1 MSLNYSGIEIKTAH--SLESWNGGVLVMVSGSVQVKDFSARRKFVQTFFLAPQEKVPNHL 58
M+ N++ K H + + N GV+V V G + + A R+F+QTF LAP+ V N
Sbjct: 65 MAQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN-QALRRFMQTFVLAPEGSVANKF 123
Query: 59 -MGGEI---QAREYVSPVDVKQNGLIDDYSFPEQRLQQVPE-----SENILEDSPAEELN 109
+ +I Q + V Q ++ PE+R QQ PE S + + + +L
Sbjct: 124 YVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEER-QQTPEVVPDDSGTFYDQTVSNDLE 182
Query: 110 GSLQNAVNAAQ-DYLPASVEEPVGEPQKHTYASILRVA 146
L+ V + D P +EPV E Q+ +L A
Sbjct: 183 EHLEEPVAEPEPDPEPEPEQEPVSEVQEEKSEPVLEEA 220
Score = 48 (22.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGIC-YAFVEFEDMTGVRNAV 267
+++ NLP V + E+ + F+ +G + V +R + + FV F+D V+ +
Sbjct: 340 LFIGNLPHEVDKLELKDFFQNYGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVL 393
>TAIR|locus:2199700 [details] [associations]
symbol:PAB3 "poly(A) binding protein 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006397
"mRNA processing" evidence=IGI] InterPro:IPR000504
InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
SMART:SM00360 SMART:SM00517 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:COG0724 KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570
TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 EMBL:AC003979 EMBL:Y12227
EMBL:AF293840 EMBL:AY054490 IPI:IPI00543342 PIR:T00768
RefSeq:NP_173690.1 UniGene:At.208 ProteinModelPortal:O64380
SMR:O64380 PaxDb:O64380 PRIDE:O64380 EnsemblPlants:AT1G22760.1
GeneID:838882 KEGG:ath:AT1G22760 TAIR:At1g22760 InParanoid:O64380
OMA:SSISHQK PhylomeDB:O64380 ProtClustDB:CLSN2679283
Genevestigator:O64380 GermOnline:AT1G22760 Uniprot:O64380
Length = 660
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 210 SVYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAVE 268
+VYV+NLP + E E+ + F KFG +SS VV+R + C+ FV FE +AVE
Sbjct: 230 NVYVKNLPKEIGEDELRKTFGKFGVISS-AVVMRDQSGNSRCFGFVNFECTEAAASAVE 287
>TAIR|locus:2046638 [details] [associations]
symbol:RSZ22a "RS-containing zinc finger protein 22a"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=NAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] InterPro:IPR000504 InterPro:IPR001878
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
PROSITE:PS50158 SMART:SM00343 SMART:SM00360 GO:GO:0005829
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0008380
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006954 Gene3D:4.10.60.10
HSSP:P19339 HOGENOM:HOG000276234 eggNOG:NOG315521 KO:K12896
EMBL:AK117883 EMBL:BT005216 IPI:IPI00534944 PIR:E84638
RefSeq:NP_180035.1 UniGene:At.39134 ProteinModelPortal:Q9SJA6
SMR:Q9SJA6 IntAct:Q9SJA6 STRING:Q9SJA6 PaxDb:Q9SJA6 PRIDE:Q9SJA6
EnsemblPlants:AT2G24590.1 GeneID:816995 KEGG:ath:AT2G24590
TAIR:At2g24590 InParanoid:Q9SJA6 OMA:EELPYAN PhylomeDB:Q9SJA6
ProtClustDB:CLSN2683045 Genevestigator:Q9SJA6 Uniprot:Q9SJA6
Length = 196
Score = 107 (42.7 bits), Expect = 0.00053, P = 0.00053
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFEDMTGVRNAV 267
VYV NL P V+E E+ +EF+ FG + S V +R+ G YAF++FED R+A+
Sbjct: 4 VYVGNLDPRVTERELEDEFRSFGVIRSVWV---ARRPPG--YAFLDFEDSRDARDAI 55
>UNIPROTKB|J3QQV5 [details] [associations]
symbol:SRSF1 "Serine/arginine-rich-splicing factor 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0050733 "RS domain binding" evidence=IEA]
[GO:0060048 "cardiac muscle contraction" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH471109
UniGene:Hs.68714 HGNC:HGNC:10780 ChiTaRS:SRSF1 EMBL:AC015813
ProteinModelPortal:J3QQV5 Ensembl:ENST00000583741 Uniprot:J3QQV5
Length = 65
Score = 90 (36.7 bits), Expect = 0.00083, P = 0.00083
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 211 VYVRNLPPSVSESEIAEEFKKFGELSSEGVVIRSRKDVGICYAFVEFED 259
+YV NLPP + +I + F K+G + + +++R+ G +AFVEFED
Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRD--IDLKNRRG-GPPFAFVEFED 63
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 275 251 0.00081 114 3 11 23 0.38 34
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 612 (65 KB)
Total size of DFA: 194 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.17u 0.21s 20.38t Elapsed: 00:00:01
Total cpu time: 20.17u 0.21s 20.38t Elapsed: 00:00:01
Start: Sat May 11 04:31:23 2013 End: Sat May 11 04:31:24 2013