BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023957
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54NS9|AIFA_DICDI Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum
GN=aifA PE=3 SV=1
Length = 408
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 145/294 (49%), Gaps = 49/294 (16%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDY 73
KRV++IG G GS VAK L + +VT+++ K+ F + AS+RA+VEP K+ I +
Sbjct: 28 KRVLIIGCGFGGSQVAKLLDSNFEVTVVERKQTFFNSIASIRAIVEPELAKKIYIPYDKL 87
Query: 74 LVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATG------HKDPVPK-TRTERLNQY 126
L NG+ + I I+ V +G+ + +DYLVIATG K P+ K + TE N Y
Sbjct: 88 LKNGKFIYGTVIEISPTLVKLEDGKELTFDYLVIATGSNSLAPFKAPLEKISGTEIFNYY 147
Query: 127 Q---------------AGGPTGVELAGEIAVDFP------EKKVTLVHKGSRLLEFIGPK 165
+ GG G E+ GEI +P KK+T+VH G++L + K
Sbjct: 148 KDISEQIKQAKSILIVGGGSVGCEVVGEIINKYPIKNKELAKKITIVHSGNKL---VSSK 204
Query: 166 AGDKTRDW----LISKKVDVKLGERVNL-DSVSE------------GSDTYLTSTGDTIN 208
+K + + + V V L +R+ + D + + TY T G +I
Sbjct: 205 TNNKFNNLINESMKKRNVSVILNDRIEIPDDIKQCFINQTSPNFQVSLKTYKTKNGLSIE 264
Query: 209 ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITD 262
+D G + S+ K T + ++ G + V+++ +V+G NIFAIGDITD
Sbjct: 265 SDFVIWTIGIKLNSESYK-TNFSNEINEIGQIKVNQSCQVQGYDNIFAIGDITD 317
>sp|Q54NS8|AIFB_DICDI Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum
GN=aifB PE=3 SV=1
Length = 387
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 135/295 (45%), Gaps = 49/295 (16%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDY 73
KRV++IGGG G VAK L +VT+++ K+ F + S+RA+VEP K+ I +
Sbjct: 6 KRVLIIGGGYGGCEVAKQLDSKFNVTVVERKQTFFHSVGSVRAVVEPELVKKIYIPYDKL 65
Query: 74 LVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVP-------KTRTERLNQY 126
L NG+ + I I+ +G+ + +DYLVIATG P K+ +E LN +
Sbjct: 66 LKNGKFIFGTVIEISPTLAKLEDGQELTFDYLVIATGSNSLAPFKAPLEKKSSSEILNYF 125
Query: 127 Q---------------AGGPTGVELAGEIAVDFP------EKKVTLVHKGSRLLEFIGPK 165
Q GG EL EI +P KK+T+VH GS+L + PK
Sbjct: 126 QNFSQQIKQAKSILIVGGGAVACELVSEIVEKYPVKDSELVKKITIVHSGSKL---VNPK 182
Query: 166 AGDKTRD----WLISKKVDVKLGERVNL-------------DSVSEGSDTYLTSTGDTIN 208
DK + + + V+V L +R+ + ++ S Y T G I
Sbjct: 183 MNDKFTNVVSKAMKKRNVEVILNDRITMPDEIKANLLNQTSPNIQISSQNYTTEKGVPIQ 242
Query: 209 ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 263
AD G S+ + + ++ G L V+ + +V+G N+FAIGD TD
Sbjct: 243 ADLIIWTVGIKTNSESYQSH-FSNVINESGQLKVNLSCQVQGYNNVFAIGDCTDF 296
>sp|Q6GLW8|AIFM2_XENLA Apoptosis-inducing factor 2 OS=Xenopus laevis GN=aifm2 PE=2 SV=1
Length = 374
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 36/262 (13%)
Query: 34 FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVN----GRIVASPAINITE 89
F L+D K+ F A+LRA VE F +++ I++ D + G++V IN+
Sbjct: 32 FGIPFLLVDMKDAFHHNVAALRACVESGFARKTFISYKDSFHDSFKQGKVVG---INLQT 88
Query: 90 NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERLNQYQA--------------------- 128
V+ + + +L+IATG P P E +++ QA
Sbjct: 89 QLVILESNEELSFSHLIIATGSNGPFPGKFNEVISKDQAIQIYENLVEEIQKAKHVVVVG 148
Query: 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERV 187
GG GVE+A E+ D+PEK+VTL+H L + + P ++ L+ K V + L ++V
Sbjct: 149 GGSAGVEMAAEVKTDYPEKEVTLIHSKIALADVQLQPSVRRTVKEILLRKGVRLILAQKV 208
Query: 188 -NLDSVS-----EGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLM 241
NLD V+ E + L + +N D C G V S + + L D + G L+
Sbjct: 209 TNLDQVTPNVAQENMELQLDKDSEVVNCDLVLCCIGLKVSSSSYR-SALGDKMAEDGSLI 267
Query: 242 VDENLRVKGQKNIFAIGDITDI 263
V++ L+V+G +N++A+GD I
Sbjct: 268 VNDYLQVQGHENVYAVGDCAYI 289
>sp|B4F6I3|AIFM2_XENTR Apoptosis-inducing factor 2 OS=Xenopus tropicalis GN=aifm2 PE=2
SV=1
Length = 374
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 36/262 (13%)
Query: 34 FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL----VNGRIVASPAINITE 89
F L+D K+ F A+LRA VE F +++ I++ D + G++V IN+
Sbjct: 32 FGIPFVLVDLKDAFHHNVAALRASVESGFARKTFISYKDTFQDNFIQGKVVG---INLQT 88
Query: 90 NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERLNQYQA--------------------- 128
V+ + + +L+IATG P P +++ QA
Sbjct: 89 QRVILESNEELQFSHLIIATGSNGPFPGKINNVISKDQAIQVYEDLVKEIQKAKHVVVVG 148
Query: 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERV 187
GG GVE+A E+ D+PEK+VTLVH L + + PK ++ L+SK V + L ++V
Sbjct: 149 GGSAGVEMAAEVKTDYPEKEVTLVHSKVALADVQLQPKVRRTVKEILLSKGVRLILAQKV 208
Query: 188 -NLDSVS-----EGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLM 241
NLD V+ E + L + + D CTG + S D L G L+
Sbjct: 209 TNLDQVTSNVAQENTVLQLDKNSEVVTCDLVLCCTGYKISSSSYSSA-FGDKLAEDGALI 267
Query: 242 VDENLRVKGQKNIFAIGDITDI 263
V++ L+V+G N++A+GD I
Sbjct: 268 VNDYLQVQGHANVYAVGDCAYI 289
>sp|B5FXE5|AIFM2_TAEGU Apoptosis-inducing factor 2 OS=Taeniopygia guttata GN=AIFM2 PE=2
SV=1
Length = 373
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 35/256 (13%)
Query: 40 LIDPKEYFEITWASLRAMVEPSFGKRSVINHT----DYLVNGRIVASPAINITENEVLTA 95
L+D ++ F A+LRA VE F K++ I+++ D G++VA I+ +V+ +
Sbjct: 38 LVDVRDAFHHNVAALRAAVESGFAKKTFISYSVTFGDSFRQGKVVA---IDPGRQQVVLS 94
Query: 96 EGRRVVYDYLVIATGHKDPVPKTRTERLNQYQA---------------------GGPTGV 134
+G + Y +L++ATG P P + ++ A GG GV
Sbjct: 95 DGEELHYSHLILATGSDGPFPGKFNQVIDMESAIQTYEDMVKEIEKSQRILVVGGGAAGV 154
Query: 135 ELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERV----NL 189
E+A EI ++P K++ L+H + L + + P ++ L+ K V + L E+V NL
Sbjct: 155 EMAAEIKTEYPGKEIILIHSKTALADVELLPSVRQVVKEILLRKGVRLLLSEKVSDIENL 214
Query: 190 DSVSEGSDTYL-TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRV 248
D + T G + D LCTG + S D + + G L V+++L++
Sbjct: 215 RPNQFQKDMVVRTEKGTEVVVDMVVLCTGIKINSSAYA-AAFGDKMASDGALKVNKHLQL 273
Query: 249 KGQKNIFAIGDITDIR 264
+G +NI+AIGD D++
Sbjct: 274 EGYENIYAIGDCADLK 289
>sp|Q9BRQ8|AIFM2_HUMAN Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIFM2 PE=1 SV=1
Length = 373
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 123/256 (48%), Gaps = 35/256 (13%)
Query: 40 LIDPKEYFEITWASLRAMVEPSFGKRSVINHT----DYLVNGRIVASPAINITENEVLTA 95
L+D K+ F A+LRA VE F K++ I+++ D G +V I++ VL
Sbjct: 39 LVDMKDSFHHNVAALRASVETGFAKKTFISYSVTFKDNFRQGLVVG---IDLKNQMVLLQ 95
Query: 96 EGRRVVYDYLVIATGHKDPVPKTRTERLNQYQA---------------------GGPTGV 134
G + + +L++ATG P P E +Q A GG GV
Sbjct: 96 GGEALPFSHLILATGSTGPFPGKFNEVSSQQAAIQAYEDMVRQVQRSRFIVVVGGGSAGV 155
Query: 135 ELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERV-NLDSV 192
E+A EI ++PEK+VTL+H L + + P + ++ L+ K V + L ERV NL+ +
Sbjct: 156 EMAAEIKTEYPEKEVTLIHSQVALADKELLPSVRQEVKEILLRKGVQLLLSERVSNLEEL 215
Query: 193 SEGS-DTYL---TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRV 248
Y+ T G + + LCTG + S + + L + G L V+E+L+V
Sbjct: 216 PLNEYREYIKVQTDKGTEVATNLVILCTGIKINSSAYRKA-FESRLASSGALRVNEHLQV 274
Query: 249 KGQKNIFAIGDITDIR 264
+G N++AIGD D+R
Sbjct: 275 EGHSNVYAIGDCADVR 290
>sp|A5PJM4|AIFM2_BOVIN Apoptosis-inducing factor 2 OS=Bos taurus GN=AIFM2 PE=2 SV=1
Length = 373
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 129/253 (50%), Gaps = 29/253 (11%)
Query: 40 LIDPKEYFEITWASLRAMVEPSFGKRSVINHT-DYLVNGRIVASPAINITENEVLTAEGR 98
L+D K+ F A+LRA VE F K++ I+++ + N R I++ VL +G+
Sbjct: 39 LVDMKDSFHHNVAALRASVESGFAKKTFISYSVTFKENFRQGLVVEIDLKNQTVLLEDGQ 98
Query: 99 RVVYDYLVIATG---------------------HKDPVPKTRTERLNQYQAGGPTGVELA 137
+ + +L++ATG ++D V + + + GG GVE+A
Sbjct: 99 ALPFSHLILATGSTGLFPGKFNQVSSQQMAIQAYEDMVTQVQRSQSIVVVGGGSAGVEMA 158
Query: 138 GEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERV-NLDS--VS 193
EI ++PEK+VTL+H L + + P + ++ L+ K V + L ERV NL++ V+
Sbjct: 159 AEIKTEYPEKEVTLIHSKMALADTELLPCVRQEVKEILLRKGVQLLLSERVSNLEALPVN 218
Query: 194 EGSDTYLTST--GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQ 251
E + T G ++A+ +C G + S + + D L ++G L V+E L+V+G
Sbjct: 219 ERRECIKVQTDKGTEVDANLVIVCNGIKINSAAYR-SAFGDRLASNGALRVNEYLQVEGY 277
Query: 252 KNIFAIGDITDIR 264
+I+AIGD D+R
Sbjct: 278 SHIYAIGDCADVR 290
>sp|Q8BUE4|AIFM2_MOUSE Apoptosis-inducing factor 2 OS=Mus musculus GN=Aifm2 PE=2 SV=1
Length = 373
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 35/256 (13%)
Query: 40 LIDPKEYFEITWASLRAMVEPSFGKRSVINHT----DYLVNGRIVASPAINITENEVLTA 95
L+D K+ F A+LRA VE F K++ I+++ D G+++ I++ VL
Sbjct: 39 LVDMKDSFHHNVAALRASVESGFAKKTFISYSATFKDNFRQGKVIG---IDLKNRMVLLQ 95
Query: 96 EGRRVVYDYLVIATGHKDPVPKTRTERLNQYQA---------------------GGPTGV 134
G + + +L++ATG P P E Q A GG GV
Sbjct: 96 GGEALPFSHLILATGSTGPFPGKFNEVSCQQAAIQAYEDMVKQIQRSQFIVVVGGGSAGV 155
Query: 135 ELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERV-NLDSV 192
E+A EI ++PEK+VTL+H L + + P + ++ L+ K V + L ERV NL+ +
Sbjct: 156 EMAAEIKTEYPEKEVTLIHSRVPLADKELLPCVRQEVKEILLRKGVQLLLSERVSNLEEL 215
Query: 193 SEGS-DTYL---TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRV 248
Y+ T G + + +C G + S + + L ++G L V+E L+V
Sbjct: 216 PRNEYREYIKVETDKGTEVATNMVIVCNGIKINSSAYRSA-FESRLASNGALKVNEFLQV 274
Query: 249 KGQKNIFAIGDITDIR 264
+G NI+AIGD D +
Sbjct: 275 EGYSNIYAIGDCADTK 290
>sp|P52923|AIF1_YEAST Apoptosis-inducing factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AIF1 PE=1 SV=1
Length = 378
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 66/274 (24%)
Query: 38 VTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNG-RIVASPAINITENEVLTAE 96
+ L+ Y +++R V + K S++ + L +G ++ A + + EV+
Sbjct: 34 IKLVTASNYVYFLPSAVRLTVSKDYTK-SILPLKNVLDSGIEVIKDTAASFDDKEVVLGS 92
Query: 97 GRRVVYDYLVIATGHK--DPVPKTRT-------------ERLNQ-----YQAGGPTGVEL 136
R + +D LV+ATG K DP+ T T R++ + GG EL
Sbjct: 93 DRAIKFDILVLATGSKWADPIGSTYTFGDNYKEYFEREASRISDADHILFLGGGFVNCEL 152
Query: 137 AGEIAVDFPE------KKVTLVHKGSRLLEFIGPKAG---DKTR----DWLISKKVDVKL 183
AGE+ + E K+++++H +LL P +G D R D+L + + L
Sbjct: 153 AGELLFKYLEEIRSGKKRISIIHNSDKLL----PDSGLYNDTLRKNVTDYLSKNGITLYL 208
Query: 184 GE-RVNLDS------VSEGSDTYLTSTGDTINADCHFLCTG----KPVGSDWLKDTILKD 232
+LD+ + EGS Y I+AD + G PV S + D
Sbjct: 209 NTVGASLDTSPKRIFLGEGSSKY-------IDADLIYRGVGISPNVPVNS-------ISD 254
Query: 233 SLDTHGMLMVDENLRVKGQK--NIFAIGDITDIR 264
D G + V++N RVK + N+FAIGD+T+ R
Sbjct: 255 LCDKKGFIQVEKNFRVKAVEAGNVFAIGDVTNFR 288
>sp|Q94BV7|NDB2_ARATH NAD(P)H dehydrogenase B2, mitochondrial OS=Arabidopsis thaliana
GN=NDB2 PE=1 SV=1
Length = 582
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 20/117 (17%)
Query: 12 KNKRVVVIGGGVAGSLVAKSLQFSA-DVTLIDPKEYFEIT---------WASLRAMVEP- 60
K K+VV++G G AG+ K+L S +V +I P+ YF T R++VEP
Sbjct: 57 KKKKVVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPI 116
Query: 61 -SFGKRSVINHTDYLVNGRIVASPA---INITENEVLTAEGRR---VVYDYLVIATG 110
+ G+++V T YL PA + + L++ G++ V YDYLVIATG
Sbjct: 117 RNIGRKNV--DTSYLEAECFKIDPASKKVYCRSKQGLSSNGKKEFSVDYDYLVIATG 171
>sp|Q8GXR9|DHNA_ARATH NADH dehydrogenase C1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=NDC1 PE=1 SV=2
Length = 519
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 128/345 (37%), Gaps = 82/345 (23%)
Query: 4 RRQQQSEGKNKRVVVIGGGVAG---SLVAKSLQFSAD----VTLIDPKEYF---EITWAS 53
R + K RV ++GGG G +L +SL + D V L+D E F + +
Sbjct: 71 RTYSWPDNKRPRVCILGGGFGGLYTALRLESLVWPEDKKPQVVLVDQSERFVFKPMLYEL 130
Query: 54 LRAMVE-----PSFG-------------KRSVINHTDYL-VNGRIVASPAINITENEVLT 94
L V+ P F + + D+L VNG I++T VL
Sbjct: 131 LSGEVDVWEIAPRFSDLLTNTGIQFLRDRVKTLLPCDHLGVNGS-----EISVTGGTVLL 185
Query: 95 AEGRRVVYDYLVIATGHK---DPVPK---------------------TRTERLNQYQAG- 129
G ++ YD+LV+A G + D VP ++ ER N ++ G
Sbjct: 186 ESGFKIEYDWLVLALGAESKLDVVPGAMELAFPFYTLEDAIRVNEKLSKLERKN-FKDGS 244
Query: 130 ---------GPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAG-DKTRDWLISKKV 179
G GVELA I+ ++ + S+ + P + L S+KV
Sbjct: 245 AIKVAVVGCGYAGVELAATISERLQDRGIVQSINVSKNILTSAPDGNREAAMKVLTSRKV 304
Query: 180 DVKLG---ERVNLDSVSEGSDTYLTST--------GDTINADCHFLCTG-KPVGSDWLKD 227
+ LG + + S E + Y I AD G KP+ +
Sbjct: 305 QLLLGYLVQSIKRASNLEEDEGYFLELQPAERGLESQIIEADIVLWTVGAKPLLTKLEPS 364
Query: 228 TILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSASMIFP 272
L+ G DE LRVKG IFA+GD + +R S I P
Sbjct: 365 GPNVLPLNARGQAETDETLRVKGHPRIFALGDSSSLRDSNGKILP 409
>sp|P48639|GSHR_BURCE Glutathione reductase OS=Burkholderia cepacia GN=gor PE=3 SV=1
Length = 449
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 138 GEIAVDFPE------KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDS 191
G IA +F + V +H+GS++L + + D L +D++LG V
Sbjct: 176 GYIACEFAGIFNGLGRHVVQLHRGSQVLRGFDDELREHLGDELKKSGIDLRLGVDVVAVE 235
Query: 192 VSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQ 251
G+ + +TGD + D TG+ + L + LD +G + VDE R
Sbjct: 236 RQRGALSVQLTTGDAMEVDAVMAATGRLPNTWGLGLETVDVGLDQNGAIKVDEYSRTS-S 294
Query: 252 KNIFAIGDITD 262
I+A+GD+T+
Sbjct: 295 PGIYAVGDVTN 305
>sp|B5FG80|NORW_VIBFM Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio fischeri
(strain MJ11) GN=norW PE=3 SV=1
Length = 381
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 84/211 (39%), Gaps = 52/211 (24%)
Query: 89 ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE---------RLNQYQA----------- 128
E + +TA G + YD LV+ATG VP + L ++ A
Sbjct: 87 EQQTITANGEQYTYDKLVLATGSHTFVPPFHGDGCEDILTLNSLKEFSAIQQKILDAKNI 146
Query: 129 ----GGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-----EFIGPKAGDKTRDWLISKKV 179
GG G ELA ++A K VTLV S LL +FI + ++ K V
Sbjct: 147 LVIGGGLIGTELAMDLA--NAGKMVTLVEPNSHLLANMMPDFISLPLENACKE----KGV 200
Query: 180 DVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGM 239
V L + V +V++ Y +T ++CH + + LK L T
Sbjct: 201 TVNLSDCV--QAVNKQEQGYRVTT-----SNCHSYYVDCVISAAGLKP---NTQLATEAN 250
Query: 240 LM------VDENLRVKGQKNIFAIGDITDIR 264
LM VD NL+ NI+A+GD +I
Sbjct: 251 LMVNRGIVVDSNLQTSA-NNIYALGDCAEIE 280
>sp|Q55CD9|NDH_DICDI Probable NADH dehydrogenase OS=Dictyostelium discoideum
GN=DDB_G0270104 PE=3 SV=2
Length = 451
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 128/331 (38%), Gaps = 84/331 (25%)
Query: 4 RRQQQSEG-KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT---------WA 52
RRQ++ + +N++++++G G K+L D+T+I P+ +F T
Sbjct: 29 RRQKRGKVIENEKLIILGCGWGSYSFLKNLNSIKYDITVISPRNHFLFTPLLTSSAVGTL 88
Query: 53 SLRAMVEPSFGKRSVINHTDYLVNGRIVASPAINITENEVL------TAEGRRVVYDYLV 106
R++ EP R IN Y+ + +IN N VL + + YD LV
Sbjct: 89 EFRSIAEPVRTTRD-INEFKYIQ----ASVTSINPENNSVLVKSTFHNEKPFEMKYDKLV 143
Query: 107 IATGHKD-----------------------------------PVPKTRTE---RLNQYQ- 127
I G ++ +P TE RL +
Sbjct: 144 IGVGSRNNTFGIKGVEENANFLKELHHAREIRQKIIECFERASLPDVSTEERERLLSFVI 203
Query: 128 -AGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV----DVK 182
GG TG+E E+ F E SRL F+ P K S K+ D K
Sbjct: 204 VGGGATGIEFTSELNDFFSEDL-------SRLFPFV-PVNEVKIILLEASGKILSTFDQK 255
Query: 183 LGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWL-------KDTILKDSL- 234
L ++ ++ + G D S+ + D L G + L + ++K+S
Sbjct: 256 LVKKALINFRNSGIDVRTHSSVKEVLKDYVILDNGDRIPYGLLVWSTGIGQHPLVKNSSF 315
Query: 235 --DTHGMLMVDENLRVKGQKNIFAIGDITDI 263
D+H ++VD++LRVK N+F+ GD ++
Sbjct: 316 EKDSHDRIIVDDHLRVKNYSNVFSFGDCANV 346
>sp|Q48A14|STHA_COLP3 Soluble pyridine nucleotide transhydrogenase OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=sthA PE=3
SV=1
Length = 466
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 148 KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTI 207
KV L++ RLL F+ + D L + V ++ GE + SE + +G +
Sbjct: 201 KVDLINTRERLLSFLDTEMSDSLSYHLWNSGVVIRHGEEIERVESSEDAVIVHLKSGKKM 260
Query: 208 NADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 267
ADC G+ + L D G L V++ + + NIFA+GD+ A
Sbjct: 261 RADCLLFANGRTGNTADLNLAAAGLKADGRGQLKVNDCYQTE-VDNIFAVGDVIGYPSLA 319
Query: 268 SMIFPQ 273
S F Q
Sbjct: 320 SAAFDQ 325
>sp|B2VGA0|STHA_ERWT9 Soluble pyridine nucleotide transhydrogenase OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=sthA PE=3
SV=1
Length = 466
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 9/158 (5%)
Query: 123 LNQYQAGGPTGVELAGEIAVDFPE------KKVTLVHKGSRLLEFIGPKAGDKTRDWLIS 176
LN + G + AG I ++ KV L++ RLL F+ + D +
Sbjct: 170 LNLHHEPGHVIIYGAGVIGCEYASIFRGLAVKVDLINTRDRLLAFLDQEMSDSLSYHFWN 229
Query: 177 KKVDVKLGERVN-LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLD 235
V ++ E ++ V++G +L S G + ADC G+ +D L + D
Sbjct: 230 NGVVIRHNEEFEKVEGVADGVIMHLKS-GKKLKADCLLYANGRTGNTDSLSLENVGLEAD 288
Query: 236 THGMLMVDENLRVKGQKNIFAIGDITDIRVSASMIFPQ 273
G+L V+ ++ Q NI+A+GD+ AS + Q
Sbjct: 289 GRGLLKVN-SMYQTAQPNIYAVGDVIGYPSLASAAYDQ 325
>sp|Q8D4F7|NORW_VIBVU Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio vulnificus
(strain CMCP6) GN=norW PE=3 SV=1
Length = 382
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 80/204 (39%), Gaps = 36/204 (17%)
Query: 87 ITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE---------RLNQYQA--------- 128
+T+ + + A GR Y LV ATG + VP R + L +YQA
Sbjct: 85 LTQQQQVVANGRCYPYSKLVFATGAQAFVPPMRGDGLAKVMTLNSLQEYQAAEQPLSRAQ 144
Query: 129 ------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPK-AGDKTRDWLISKKVDV 181
GG GVE+A ++A K+VT+V +RLL + P+ L+ + +
Sbjct: 145 HVLVIGGGLIGVEIALDLATS--GKQVTVVEPNARLLANLLPEFIALPLEQQLMKHGIQL 202
Query: 182 KLGERVNLDSVSEGSDTYLTST--GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGM 239
L RV +SV+E T + G D G + ++ L
Sbjct: 203 ALNSRV--ESVTEQGQTLAIALHDGREFAVDAVLCAAGLKANTAVAREA----GLSVERG 256
Query: 240 LMVDENLRVKGQKNIFAIGDITDI 263
+ VD L +I+A+GD I
Sbjct: 257 ICVDHQLNTS-DPHIYALGDCAQI 279
>sp|F4JJJ3|NDB3_ARATH NAD(P)H dehydrogenase B3, mitochondrial OS=Arabidopsis thaliana
GN=NDB3 PE=2 SV=1
Length = 580
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 122/329 (37%), Gaps = 78/329 (23%)
Query: 8 QSEGKNKRVVVIGGGVAGSLVAKSLQFSA-DVTLIDPKEYFEIT---------WASLRAM 57
+++ + ++VV++G G AG+ K+L S+ +V +I P+ YF T R++
Sbjct: 50 ETKTRKRKVVLLGTGWAGASFLKTLNNSSYEVQVISPRNYFAFTPLLPSVTCGTVEARSV 109
Query: 58 VEPSFGKRSVINHTDYLVNGRIV----ASPAINITENEVLTAEGRR---VVYDYLVIATG 110
VEP N + S + + + ++G++ V YDYLVIATG
Sbjct: 110 VEPIRNIARKQNVEMSFLEAECFKIDPGSKKVYCRSKQGVNSKGKKEFDVDYDYLVIATG 169
Query: 111 HK-------------------DPVPKTRTERLNQYQAGGPTGV----------------- 134
+ + + R+ ++ ++ G+
Sbjct: 170 AQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKASLPGLNEQERKRMLHFVVVGGG 229
Query: 135 ----ELAGEIAVDF---------PEKK----VTLVHKGSRLLEFIGPKAGDKTRDWLISK 177
E A E+ DF P+ K +TL+ +L + + +
Sbjct: 230 PTGVEFASELH-DFVNEDLVKLYPKAKNLVQITLLEAADHILTMFDKRITEFAEEKFTRD 288
Query: 178 KVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTG---KPVGSDWLKDTILKDSL 234
+DVKLG V + E S TI TG +PV D++K
Sbjct: 289 GIDVKLGSMVVKVNDKEISAKTKAGEVSTIPYGMIVWSTGIGTRPVIKDFMKQI----GQ 344
Query: 235 DTHGMLMVDENLRVKGQKNIFAIGDITDI 263
L DE LRV+G NI+A+GD I
Sbjct: 345 GNRRALATDEWLRVEGCDNIYALGDCATI 373
>sp|P23189|GSHR_PSEAE Glutathione reductase OS=Pseudomonas aeruginosa (strain ATCC 15692
/ PAO1 / 1C / PRS 101 / LMG 12228) GN=gor PE=3 SV=1
Length = 451
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Query: 96 EGRRVVYDYLVIATGHKDPVPK--------TRTERLNQYQAGGPTGVELAGEIAVDFPE- 146
+G+R ++++ATG VP T E + V G IAV+F
Sbjct: 125 DGQRFSAKHILVATGGWPQVPDIPGKEHAITSNEAFFLERLPRRVLVVGGGYIAVEFASI 184
Query: 147 -----KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERV-NLDSVSEGSDTYL 200
+ TL+++ L + RD L K +D++ + +D ++GS
Sbjct: 185 FNGLGAETTLLYRRDLFLRGFDRSVREHLRDELGKKGLDLQFNSDIARIDKQADGSLAAT 244
Query: 201 TSTGDTINADCHFLCTG-KPVGSDW-LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIG 258
G + ADC F TG +P+ D L++T +K L G + VDE+ + + +I A+G
Sbjct: 245 LKDGRVLEADCVFYATGRRPMLDDLGLENTAVK--LTDKGFIAVDEHYQTS-EPSILALG 301
Query: 259 DI 260
D+
Sbjct: 302 DV 303
>sp|O32117|YUTJ_BACSU NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain
168) GN=yutJ PE=3 SV=2
Length = 355
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 119/293 (40%), Gaps = 52/293 (17%)
Query: 14 KRVVVIGGG-----VAGSLVAKSLQFSADVTLID--PKEYFEITWASLRA-MVEPSFGKR 65
K++V+IGGG V L+ L +TLID P + + +L A + +
Sbjct: 2 KKLVLIGGGYGNMRVLHRLLPNQLPDDVSITLIDRNPYHCLKTEYYALAAGTISDHHIRV 61
Query: 66 SVINHTDYLVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDP---VP------ 116
S H V + S I+I + +VL + + YD +I G +D VP
Sbjct: 62 SFPEHPRLDVQYGDITS--IDIVQKQVLFQDREPISYDDAIIGLGCEDKYHNVPGAPEFT 119
Query: 117 ---------KTRTERLNQYQA--------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLL 159
+ ++LN A G +GVELA E+ + + L +G+ +L
Sbjct: 120 YSIQTIDQSRETYQKLNNLSANATVAIVGAGLSGVELASELRESRDDLNIILFDRGNLIL 179
Query: 160 EFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTG-K 218
+ + W ++ V++ R N+ V EG + + D I+AD G +
Sbjct: 180 SSFPERLSKYVQKWF--EEHGVRIINRANITKVEEG---VVYNHDDPISADAIVWTAGIQ 234
Query: 219 PVGSDWLKDTILKD---SLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSAS 268
P + +++D D G +++ + + G ++++ +GD + + S
Sbjct: 235 P-------NKVVRDLDVEKDAQGRIVLTPHHNLPGDEHLYVVGDCASLPHAPS 280
>sp|P66006|STHA_MYCTU Probable soluble pyridine nucleotide transhydrogenase
OS=Mycobacterium tuberculosis GN=sthA PE=3 SV=1
Length = 468
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 99/252 (39%), Gaps = 59/252 (23%)
Query: 49 ITWASLRAMVEPSFGKRSVI-------NHTDYLV-NGRIVASPAINITENEVLTAEGRRV 100
IT A L A + GK + N D +V +GR + P + E++ E V
Sbjct: 79 ITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFI-DPHTILVEDQA-RREKTTV 136
Query: 101 VYDYLVIATGHKDPVPKTRTERLNQYQAGGPTGVEL------------------------ 136
DY++IATG TR R P+GVE
Sbjct: 137 TGDYIIIATG-------TRPAR--------PSGVEFDEERVLDSDGILDLKSLPSSMVVV 181
Query: 137 -AGEIAVDFPE------KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN- 188
AG I +++ KVT+V K +L+F P+ + + L V + GE V
Sbjct: 182 GAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTA 241
Query: 189 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRV 248
+D S G+ T L S G I A+ G+ +D L + G + VD+ +
Sbjct: 242 VDVGSAGTVTTLAS-GKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRGRIFVDDRFQT 300
Query: 249 KGQKNIFAIGDI 260
K +I+A+GD+
Sbjct: 301 K-VDHIYAVGDV 311
>sp|A5U665|STHA_MYCTA Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=sthA PE=3
SV=1
Length = 468
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 99/252 (39%), Gaps = 59/252 (23%)
Query: 49 ITWASLRAMVEPSFGKRSVI-------NHTDYLV-NGRIVASPAINITENEVLTAEGRRV 100
IT A L A + GK + N D +V +GR + P + E++ E V
Sbjct: 79 ITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFI-DPHTILVEDQA-RREKTTV 136
Query: 101 VYDYLVIATGHKDPVPKTRTERLNQYQAGGPTGVEL------------------------ 136
DY++IATG TR R P+GVE
Sbjct: 137 TGDYIIIATG-------TRPAR--------PSGVEFDEERVLDSDGILDLKSLPSSMVVV 181
Query: 137 -AGEIAVDFPE------KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN- 188
AG I +++ KVT+V K +L+F P+ + + L V + GE V
Sbjct: 182 GAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTA 241
Query: 189 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRV 248
+D S G+ T L S G I A+ G+ +D L + G + VD+ +
Sbjct: 242 VDVGSAGTVTTLAS-GKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRGRIFVDDRFQT 300
Query: 249 KGQKNIFAIGDI 260
K +I+A+GD+
Sbjct: 301 K-VDHIYAVGDV 311
>sp|C1AFH2|STHA_MYCBT Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis
(strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sthA
PE=3 SV=1
Length = 468
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 99/252 (39%), Gaps = 59/252 (23%)
Query: 49 ITWASLRAMVEPSFGKRSVI-------NHTDYLV-NGRIVASPAINITENEVLTAEGRRV 100
IT A L A + GK + N D +V +GR + P + E++ E V
Sbjct: 79 ITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFI-DPHTILVEDQA-RREKTTV 136
Query: 101 VYDYLVIATGHKDPVPKTRTERLNQYQAGGPTGVEL------------------------ 136
DY++IATG TR R P+GVE
Sbjct: 137 TGDYIIIATG-------TRPAR--------PSGVEFDEERVLDSDGILDLKSLPSSMVVV 181
Query: 137 -AGEIAVDFPE------KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN- 188
AG I +++ KVT+V K +L+F P+ + + L V + GE V
Sbjct: 182 GAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTA 241
Query: 189 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRV 248
+D S G+ T L S G I A+ G+ +D L + G + VD+ +
Sbjct: 242 VDVGSAGTVTTLAS-GKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRGRIFVDDRFQT 300
Query: 249 KGQKNIFAIGDI 260
K +I+A+GD+
Sbjct: 301 K-VDHIYAVGDV 311
>sp|A1KM51|STHA_MYCBP Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis
(strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1
Length = 468
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 99/252 (39%), Gaps = 59/252 (23%)
Query: 49 ITWASLRAMVEPSFGKRSVI-------NHTDYLV-NGRIVASPAINITENEVLTAEGRRV 100
IT A L A + GK + N D +V +GR + P + E++ E V
Sbjct: 79 ITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFI-DPHTILVEDQA-RREKTTV 136
Query: 101 VYDYLVIATGHKDPVPKTRTERLNQYQAGGPTGVEL------------------------ 136
DY++IATG TR R P+GVE
Sbjct: 137 TGDYIIIATG-------TRPAR--------PSGVEFDEERVLDSDGILDLKSLPSSMVVV 181
Query: 137 -AGEIAVDFPE------KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN- 188
AG I +++ KVT+V K +L+F P+ + + L V + GE V
Sbjct: 182 GAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTA 241
Query: 189 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRV 248
+D S G+ T L S G I A+ G+ +D L + G + VD+ +
Sbjct: 242 VDVGSAGTVTTLAS-GKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRGRIFVDDRFQT 300
Query: 249 KGQKNIFAIGDI 260
K +I+A+GD+
Sbjct: 301 K-VDHIYAVGDV 311
>sp|P66007|STHA_MYCBO Probable soluble pyridine nucleotide transhydrogenase
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=sthA PE=3 SV=1
Length = 468
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 99/252 (39%), Gaps = 59/252 (23%)
Query: 49 ITWASLRAMVEPSFGKRSVI-------NHTDYLV-NGRIVASPAINITENEVLTAEGRRV 100
IT A L A + GK + N D +V +GR + P + E++ E V
Sbjct: 79 ITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFI-DPHTILVEDQA-RREKTTV 136
Query: 101 VYDYLVIATGHKDPVPKTRTERLNQYQAGGPTGVEL------------------------ 136
DY++IATG TR R P+GVE
Sbjct: 137 TGDYIIIATG-------TRPAR--------PSGVEFDEERVLDSDGILDLKSLPSSMVVV 181
Query: 137 -AGEIAVDFPE------KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN- 188
AG I +++ KVT+V K +L+F P+ + + L V + GE V
Sbjct: 182 GAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEVVEALKFHLRDLAVTFRFGEEVTA 241
Query: 189 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRV 248
+D S G+ T L S G I A+ G+ +D L + G + VD+ +
Sbjct: 242 VDVGSAGTVTTLAS-GKQIPAETVMYSAGRQGQTDHLDLHNAGLEVQGRGRIFVDDRFQT 300
Query: 249 KGQKNIFAIGDI 260
K +I+A+GD+
Sbjct: 301 K-VDHIYAVGDV 311
>sp|P57112|STHA_PSEAE Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=sthA PE=1 SV=2
Length = 464
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 80/209 (38%), Gaps = 35/209 (16%)
Query: 91 EVLTAEG--RRVVYDYLVIATGHKDPVPK------------------TRTERLNQYQAGG 130
EV+T G R+V D VIATG + P + T R G
Sbjct: 125 EVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAG 184
Query: 131 PTGVELAG-----EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGE 185
G E A + VD L+ +LL F+ + D L + V ++ E
Sbjct: 185 VIGCEYASIFSGLGVLVD-------LIDTRDQLLSFLDDEISDALSYHLRNNNVLIRHNE 237
Query: 186 RVN-LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDE 244
++ + G +L S G I AD C G+ +D L + +++ G + VDE
Sbjct: 238 EYERVEGLDNGVILHLKS-GKKIKADALLWCNGRTGNTDKLGLENVGIKVNSRGQIEVDE 296
Query: 245 NLRVKGQKNIFAIGDITDIRVSASMIFPQ 273
N R NIFA GD+ AS + Q
Sbjct: 297 NYRTS-VSNIFAAGDVIGWPSLASAAYDQ 324
>sp|Q02PF5|STHA_PSEAB Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=sthA PE=3 SV=1
Length = 464
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 80/209 (38%), Gaps = 35/209 (16%)
Query: 91 EVLTAEG--RRVVYDYLVIATGHKDPVPK------------------TRTERLNQYQAGG 130
EV+T G R+V D VIATG + P + T R G
Sbjct: 125 EVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAG 184
Query: 131 PTGVELAG-----EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGE 185
G E A + VD L+ +LL F+ + D L + V ++ E
Sbjct: 185 VIGCEYASIFSGLGVLVD-------LIDTRDQLLSFLDDEISDALSYHLRNNNVLIRHNE 237
Query: 186 RVN-LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDE 244
++ + G +L S G I AD C G+ +D L + +++ G + VDE
Sbjct: 238 EYERVEGLDNGVILHLKS-GKKIKADALLWCNGRTGNTDKLGLENVGIKVNSRGQIEVDE 296
Query: 245 NLRVKGQKNIFAIGDITDIRVSASMIFPQ 273
N R NIFA GD+ AS + Q
Sbjct: 297 NYRTS-VSNIFAAGDVIGWPSLASAAYDQ 324
>sp|B7UZU5|STHA_PSEA8 Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
aeruginosa (strain LESB58) GN=sthA PE=3 SV=1
Length = 464
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 80/209 (38%), Gaps = 35/209 (16%)
Query: 91 EVLTAEG--RRVVYDYLVIATGHKDPVPK------------------TRTERLNQYQAGG 130
EV+T G R+V D VIATG + P + T R G
Sbjct: 125 EVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAG 184
Query: 131 PTGVELAG-----EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGE 185
G E A + VD L+ +LL F+ + D L + V ++ E
Sbjct: 185 VIGCEYASIFSGLGVLVD-------LIDTRDQLLSFLDDEISDALSYHLRNNNVLIRHNE 237
Query: 186 RVN-LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDE 244
++ + G +L S G I AD C G+ +D L + +++ G + VDE
Sbjct: 238 EYERVEGLDNGVILHLKS-GKKIKADALLWCNGRTGNTDKLGLENVGIKVNSRGQIEVDE 296
Query: 245 NLRVKGQKNIFAIGDITDIRVSASMIFPQ 273
N R NIFA GD+ AS + Q
Sbjct: 297 NYRTS-VSNIFAAGDVIGWPSLASAAYDQ 324
>sp|A4XSQ1|STHA_PSEMY Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
mendocina (strain ymp) GN=sthA PE=3 SV=1
Length = 464
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 149 VTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN-LDSVSEGSDTYLTSTGDTI 207
V L+ +LL F+ + D L + V ++ E ++ V G +L S G I
Sbjct: 201 VDLIDNRDQLLSFLDSEISDALSYHLRNNNVLIRHNEEYERIEGVENGVVLHLKS-GKKI 259
Query: 208 NADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDI 260
AD C G+ +D L + ++++ G + VDE+ R + NI+A GD+
Sbjct: 260 KADALLWCNGRTGNTDQLGLENIGIAVNSRGQIQVDEHYRTE-VSNIYAAGDV 311
>sp|A6V3A6|STHA_PSEA7 Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
aeruginosa (strain PA7) GN=sthA PE=3 SV=1
Length = 464
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 80/209 (38%), Gaps = 35/209 (16%)
Query: 91 EVLTAEG--RRVVYDYLVIATGHKDPVPK------------------TRTERLNQYQAGG 130
EV+T G R+V D VIATG + P + T R G
Sbjct: 125 EVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAG 184
Query: 131 PTGVELAG-----EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGE 185
G E A + VD L+ +LL F+ + D L + V ++ E
Sbjct: 185 VIGCEYASIFSGLGVLVD-------LIDTRDQLLSFLDDEISDALSYHLRNNNVLIRHNE 237
Query: 186 RVN-LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDE 244
++ + G +L S G I AD C G+ +D L + +++ G + VDE
Sbjct: 238 EYERVEGLDNGVILHLKS-GKKIKADALLWCNGRTGNTDKLGLENVGIKVNSRGQVEVDE 296
Query: 245 NLRVKGQKNIFAIGDITDIRVSASMIFPQ 273
N R NIFA GD+ AS + Q
Sbjct: 297 NYRTS-VSNIFAAGDVIGWPSLASAAYDQ 324
>sp|Q1JPL4|NDB1_ARATH NAD(P)H dehydrogenase B1, mitochondrial OS=Arabidopsis thaliana
GN=NDB1 PE=1 SV=1
Length = 571
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 121/327 (37%), Gaps = 89/327 (27%)
Query: 16 VVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL 74
VVV+G G AG K L S DV ++ P+ YF T L ++ + RS++ +
Sbjct: 52 VVVLGTGWAGISFLKDLDITSYDVQVVSPQNYFAFT-PLLPSVTCGTVEARSIVESVRNI 110
Query: 75 --------------------VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHK-- 112
VN ++ P + +++ ++ + YDYL++A G +
Sbjct: 111 TKKKNGEIELWEADCFKIDHVNQKVHCRP---VFKDDPEASQEFSLGYDYLIVAVGAQVN 167
Query: 113 ----------------------------DPVPKTRTERLNQYQ----------AGGPTGV 134
D K L + Q GGPTGV
Sbjct: 168 TFGTPGVLENCHFLKEVEDAQRIRRGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGV 227
Query: 135 ELAGE--------IAVDFPE----KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVK 182
E A E I +P K+TL+ G +L + +DV+
Sbjct: 228 EFAAELHDFIIEDITKIYPSVKELVKITLIQSGDHILNTFDERISSFAEQKFTRDGIDVQ 287
Query: 183 LGERVNLDSVSEGSDTY-LTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGM-- 239
G RV SV++ T + S+G+ ++ + VG+ ++ D ++ G
Sbjct: 288 TGMRVM--SVTDKDITVKVKSSGELVSIPHGLILWSTGVGT----RPVISDFMEQVGQGG 341
Query: 240 ---LMVDENLRVKGQKNIFAIGDITDI 263
+ +E L+V G +N++A+GD I
Sbjct: 342 RRAVATNEWLQVTGCENVYAVGDCASI 368
>sp|Q7MFY7|NORW_VIBVY Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio vulnificus
(strain YJ016) GN=norW PE=3 SV=1
Length = 382
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Query: 87 ITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE---------RLNQYQA--------- 128
+T+ + + A GR Y LV ATG + VP R + L +YQA
Sbjct: 85 LTQQQQVVANGRCYPYSKLVFATGAQAFVPPMRGDGLAKVMTLNSLQEYQAAEQPLSRAQ 144
Query: 129 ------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPK-AGDKTRDWLISKKVDV 181
GG GVE+A ++A K+VT+V +RLL + P+ L+ + +
Sbjct: 145 HVLVIGGGLIGVEIALDLATS--GKQVTVVEPNARLLANLLPEFIALPLEQQLMKHGIQL 202
Query: 182 KLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLM 241
L RV +V + G D G + ++ L +
Sbjct: 203 ALNSRVESVTVQGQTLAIALHDGREFAVDAVLCAAGLKANTAVAREA----GLSVERGIC 258
Query: 242 VDENLRVKGQKNIFAIGDITDI 263
VD L +I+A+GD I
Sbjct: 259 VDLQLNTS-DPHIYALGDCAQI 279
>sp|Q6LLT9|STHA_PHOPR Soluble pyridine nucleotide transhydrogenase OS=Photobacterium
profundum GN=sthA PE=3 SV=1
Length = 469
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 148 KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTI 207
KV L++ RLLEF+ + D L + ++ GE ++ S +G +
Sbjct: 204 KVDLINTRHRLLEFLDNEISDSLSYHLWNSGAMIRNGETFEKIEGTDDSIILHLESGKKM 263
Query: 208 NADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 267
ADC G+ +D L + + D+ G L V++N +++A+GD+ A
Sbjct: 264 RADCLLYANGRTGNTDKLNLNKVGLTPDSRGQLAVNQNY-CTDVDHVYAVGDVIGYPSLA 322
Query: 268 SMIFPQ 273
S + Q
Sbjct: 323 SAAYDQ 328
>sp|O07220|Y1812_MYCTU NADH dehydrogenase-like protein Rv1812c/MT1860 OS=Mycobacterium
tuberculosis GN=Rv1812c PE=2 SV=1
Length = 400
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 56/227 (24%)
Query: 84 AINITENEVLTAEGRRVVYDYLVIATGH---KDPVP--------------KTRTERLNQY 126
AI+ V T+ G YD LV+A+G K +P R ++ Q
Sbjct: 81 AIDADGRRVTTSTGASYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQG 140
Query: 127 QAGGP---------------TGVELAGEIAVDFPEKKVTLVHKGSRLLE---------FI 162
AGGP TG+E A E+ P + L +G + F+
Sbjct: 141 LAGGPLTSAAATVVVVGAGLTGIETACEL----PGRLHALFARGDGVTPRVVLIDHNPFV 196
Query: 163 GPKAGDKTR----DWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 218
G G R L+ V+ + G V++ +VS G T S+G+ + A C G
Sbjct: 197 GSDMGLSARPVIEQALLDNGVETRTG--VSVAAVSPGGVTL--SSGERLAAATVVWCAGM 252
Query: 219 PVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265
+ + +D L G L VD+ LRV G +FA GD+ R+
Sbjct: 253 RASRLTEQLPVARDRL---GRLQVDDYLRVIGVPAMFAAGDVAAARM 296
>sp|Q2YWP9|Y807_STAAB NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1
Length = 402
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 83/315 (26%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGKRSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKTISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVL-------TAEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQA---------------GGPTGVELAGEI 140
H + T R Y A G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 141 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189
PE K+T V ++L + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT-ILKDSLD--THGMLMVDENL 246
V+ ++ ++ + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 247 RVKGQKNIFAIGDIT 261
+ G NIF IGD +
Sbjct: 290 TINGYDNIFVIGDCS 304
>sp|Q5HHE4|Y944_STAAC NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus
(strain COL) GN=SACOL0944 PE=3 SV=1
Length = 402
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 83/315 (26%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGKRSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVL-------TAEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQA---------------GGPTGVELAGEI 140
H + T R Y A G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 141 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189
PE K+T V ++L + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT-ILKDSLD--THGMLMVDENL 246
V+ ++ ++ + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 247 RVKGQKNIFAIGDIT 261
+ G NIF IGD +
Sbjct: 290 TINGYDNIFVIGDCS 304
>sp|Q99VE0|Y941_STAAM NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV0941 PE=1 SV=1
Length = 402
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 83/315 (26%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGKRSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVL-------TAEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQA---------------GGPTGVELAGEI 140
H + T R Y A G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 141 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189
PE K+T V ++L + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT-ILKDSLD--THGMLMVDENL 246
V+ ++ ++ + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 247 RVKGQKNIFAIGDIT 261
+ G NIF IGD +
Sbjct: 290 TINGYDNIFVIGDCS 304
>sp|Q6GIE7|Y903_STAAR NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0903 PE=3 SV=1
Length = 402
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 83/315 (26%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGKRSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVL-------TAEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQA---------------GGPTGVELAGEI 140
H + T R Y A G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 141 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189
PE K+T V ++L + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT-ILKDSLD--THGMLMVDENL 246
V+ ++ ++ + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 247 RVKGQKNIFAIGDIT 261
+ G NIF IGD +
Sbjct: 290 TINGYDNIFVIGDCS 304
>sp|Q2FZV7|Y878_STAA8 NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=3 SV=1
Length = 402
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 83/315 (26%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGKRSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVL-------TAEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQA---------------GGPTGVELAGEI 140
H + T R Y A G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 141 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189
PE K+T V ++L + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT-ILKDSLD--THGMLMVDENL 246
V+ ++ ++ + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 247 RVKGQKNIFAIGDIT 261
+ G NIF IGD +
Sbjct: 290 TINGYDNIFVIGDCS 304
>sp|Q2FID4|Y844_STAA3 NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1
Length = 402
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 83/315 (26%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGKRSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVL-------TAEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQA---------------GGPTGVELAGEI 140
H + T R Y A G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 141 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189
PE K+T V ++L + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT-ILKDSLD--THGMLMVDENL 246
V+ ++ ++ + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 247 RVKGQKNIFAIGDIT 261
+ G NIF IGD +
Sbjct: 290 TINGYDNIFVIGDCS 304
>sp|Q8NXG0|Y823_STAAW NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus
(strain MW2) GN=MW0823 PE=3 SV=1
Length = 402
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 83/315 (26%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGKRSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVL-------TAEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQA---------------GGPTGVELAGEI 140
H + T R Y A G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 141 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189
PE K+T V ++L + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT-ILKDSLD--THGMLMVDENL 246
V+ ++ ++ + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 247 RVKGQKNIFAIGDIT 261
+ G NIF IGD +
Sbjct: 290 TINGYDNIFVIGDCS 304
>sp|Q6GAY5|Y811_STAAS NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0811 PE=3 SV=1
Length = 402
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 83/315 (26%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGKRSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVL-------TAEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQA---------------GGPTGVELAGEI 140
H + T R Y A G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 141 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189
PE K+T V ++L + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT-ILKDSLD--THGMLMVDENL 246
V+ ++ ++ + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 247 RVKGQKNIFAIGDIT 261
+ G NIF IGD +
Sbjct: 290 TINGYDNIFVIGDCS 304
>sp|Q7A6J4|Y802_STAAN NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus
(strain N315) GN=SA0802 PE=1 SV=1
Length = 402
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 83/315 (26%)
Query: 14 KRVVVIGGGVAGSLVAKSLQFS-----ADVTLIDPKEY-FEITWASLRAMVEPSFGKRSV 67
K+V+V+G G AG LQ + A++TLI+ EY +E TW + E S G
Sbjct: 6 KKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATW-----LHEASAG---T 57
Query: 68 INHTDYLVN-GRIVASPAINITENEVL-------TAEGRRVVYDY--LVIATG------- 110
+N+ D L ++ +N + EV E + +YD+ LV+A G
Sbjct: 58 LNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFG 117
Query: 111 ------HKDPVPKTRTER---------LNQYQA---------------GGPTGVELAGEI 140
H + T R Y A G TGVE GE+
Sbjct: 118 IEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGEL 177
Query: 141 AVDFPEK-----------KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189
PE K+T V ++L + + +L + V+ K+ +
Sbjct: 178 TDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI-- 235
Query: 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDT-ILKDSLD--THGMLMVDENL 246
V+ ++ ++ + L G V + ++ + ++++S + G ++ ++L
Sbjct: 236 --VACNEKGFVVE----VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 247 RVKGQKNIFAIGDIT 261
+ G NIF IGD +
Sbjct: 290 TINGYDNIFVIGDCS 304
>sp|P39051|TYTR_TRYBB Trypanothione reductase OS=Trypanosoma brucei brucei GN=TPR PE=1
SV=1
Length = 492
Score = 38.1 bits (87), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 129 GGPTGVELAGEI-AVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGE-- 185
GG VE AG A P KVTL ++ + +L ++ L + +++ E
Sbjct: 196 GGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENP 255
Query: 186 -RVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDE 244
+V+L++ +GS +G T++ D + G+ ++ L+ + L G + VDE
Sbjct: 256 AKVSLNT--DGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDE 313
Query: 245 NLRVKGQKNIFAIGDITD 262
R NI+AIGDITD
Sbjct: 314 FSRTN-VPNIYAIGDITD 330
>sp|Q3K9F5|STHA_PSEPF Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
fluorescens (strain Pf0-1) GN=sthA PE=3 SV=1
Length = 464
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 149 VTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN-LDSVSEGSDTYLTSTGDTI 207
V LV +LL F+ + + + V+ E + ++ V G +L S G I
Sbjct: 201 VELVDNRGQLLSFLDSEISQALSYHFSNNNITVRHNEEYDRVEGVDNGVILHLKS-GKKI 259
Query: 208 NADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDI 260
AD C G+ +D L + +++ G + VDEN R Q NI+ GD+
Sbjct: 260 KADALLWCNGRTGNTDQLGLENIGVKVNSRGQIEVDENYRTCVQ-NIYGAGDV 311
>sp|P13110|TYTR_TRYCO Trypanothione reductase OS=Trypanosoma congolense GN=TPR PE=1 SV=1
Length = 492
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 129 GGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERV 187
GG VE AG P KVTL ++ + +L + L++ +D+ E
Sbjct: 196 GGFISVEFAGIFNAYKPVGGKVTLCYRNNPILRGFDYTLRQELTKQLVANGIDIMTNENP 255
Query: 188 N-LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENL 246
+ ++ +GS +G T++ D + G+ + +L+ + +L G + VDE
Sbjct: 256 SKIELNPDGSKHVTFESGKTLDVDVVMMAIGRLPRTGYLQLQTVGVNLTDKGAIQVDEFS 315
Query: 247 RVKGQKNIFAIGDIT 261
R NI+AIGD+T
Sbjct: 316 RTN-VPNIYAIGDVT 329
>sp|P00393|DHNA_ECOLI NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1
SV=2
Length = 434
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 23/146 (15%)
Query: 129 GGPTGVELAGEI-------------AVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLI 175
GG TGVEL+ E+ + VTLV G R+L + P+ + L
Sbjct: 178 GGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNEL- 236
Query: 176 SKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLD 235
K+ V++ + + S EG T G+ I AD G D+LKD L+
Sbjct: 237 -TKLGVRVLTQTMVTSADEGG--LHTKDGEYIEADLMVWAAGIK-APDFLKDI---GGLE 289
Query: 236 TH--GMLMVDENLRVKGQKNIFAIGD 259
T+ L+V+ L+ +I+AIGD
Sbjct: 290 TNRINQLVVEPTLQTTRDPDIYAIGD 315
>sp|P69653|RR4_TRIDA 30S ribosomal protein S4, chloroplastic (Fragment) OS=Tripsacum
dactyloides GN=rps4 PE=3 SV=1
Length = 196
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 63 GKRSVINHTDYLVNGRIVASPAINITENEVLTAE----GRRVVYDYLVIATGHKDPVPKT 118
G R ++NH LVNGRIV P+ +++T + +R+V +Y IA+ +PK
Sbjct: 106 GARQLVNHRHILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNY--IASSDPGKLPKH 163
Query: 119 RTERLNQYQA 128
T QY+
Sbjct: 164 LTVDTLQYKG 173
>sp|P69631|RR4_BOTIS 30S ribosomal protein S4, chloroplastic (Fragment) OS=Bothriochloa
ischaemum GN=rps4 PE=3 SV=1
Length = 196
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 63 GKRSVINHTDYLVNGRIVASPAINITENEVLTAE----GRRVVYDYLVIATGHKDPVPKT 118
G R ++NH LVNGRIV P+ +++T + +R+V +Y IA+ +PK
Sbjct: 106 GARQLVNHRHILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNY--IASSDPGKLPKH 163
Query: 119 RTERLNQYQA 128
T QY+
Sbjct: 164 LTVDTLQYKG 173
>sp|A1E9S6|RR4_SORBI 30S ribosomal protein S4, chloroplastic OS=Sorghum bicolor GN=rps4
PE=3 SV=1
Length = 201
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 63 GKRSVINHTDYLVNGRIVASPAINITENEVLTAE----GRRVVYDYLVIATGHKDPVPKT 118
G R ++NH LVNGRIV P+ +++T + +R+V +Y IA+ +PK
Sbjct: 106 GARQLVNHRHILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNY--IASSDPGKLPKH 163
Query: 119 RTERLNQYQA 128
T QY+
Sbjct: 164 LTVDTLQYKG 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,786,621
Number of Sequences: 539616
Number of extensions: 4325429
Number of successful extensions: 14210
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 13992
Number of HSP's gapped (non-prelim): 301
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)