Query 023957
Match_columns 275
No_of_seqs 184 out of 1921
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 15:41:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ef6_A Toluene 1,2-dioxygenase 100.0 1.8E-34 6E-39 244.7 20.8 247 13-266 2-282 (410)
2 4eqs_A Coenzyme A disulfide re 100.0 1.5E-34 5E-39 246.7 18.9 244 15-267 2-284 (437)
3 4g6h_A Rotenone-insensitive NA 100.0 8.8E-34 3E-38 245.2 23.2 254 12-267 41-380 (502)
4 2wpf_A Trypanothione reductase 100.0 7.6E-35 2.6E-39 252.2 14.0 253 12-265 6-336 (495)
5 2r9z_A Glutathione amide reduc 100.0 1.1E-34 3.7E-39 249.5 14.7 249 12-265 3-308 (463)
6 4dna_A Probable glutathione re 100.0 8E-35 2.7E-39 250.5 14.0 251 11-266 3-313 (463)
7 1ges_A Glutathione reductase; 100.0 1.2E-34 4E-39 248.5 14.9 249 12-265 3-309 (450)
8 3lxd_A FAD-dependent pyridine 100.0 2.7E-33 9.3E-38 237.9 22.9 248 12-266 8-292 (415)
9 3oc4_A Oxidoreductase, pyridin 100.0 5.1E-34 1.7E-38 244.8 17.6 245 14-265 3-285 (452)
10 3iwa_A FAD-dependent pyridine 100.0 1E-33 3.5E-38 244.3 19.4 249 13-266 3-301 (472)
11 3fg2_P Putative rubredoxin red 100.0 4E-33 1.4E-37 236.0 22.1 246 14-266 2-282 (404)
12 3o0h_A Glutathione reductase; 100.0 4.3E-35 1.5E-39 253.5 10.0 251 12-266 25-333 (484)
13 3ic9_A Dihydrolipoamide dehydr 100.0 9E-35 3.1E-39 251.6 11.9 254 9-267 4-321 (492)
14 1mo9_A ORF3; nucleotide bindin 100.0 3.2E-34 1.1E-38 249.9 15.0 250 11-266 41-360 (523)
15 2hqm_A GR, grase, glutathione 100.0 6.6E-34 2.2E-38 245.7 15.8 248 12-265 10-328 (479)
16 1zk7_A HGII, reductase, mercur 100.0 2.5E-33 8.5E-38 241.6 19.1 249 12-266 3-316 (467)
17 2gqw_A Ferredoxin reductase; f 100.0 1.1E-32 3.8E-37 233.4 22.5 243 12-266 6-280 (408)
18 2qae_A Lipoamide, dihydrolipoy 100.0 5.3E-34 1.8E-38 245.8 14.6 250 13-265 2-321 (468)
19 3ntd_A FAD-dependent pyridine 100.0 6.3E-33 2.2E-37 244.6 21.1 248 14-266 2-310 (565)
20 1fec_A Trypanothione reductase 100.0 4E-34 1.4E-38 247.5 13.1 252 13-265 3-332 (490)
21 2cdu_A NADPH oxidase; flavoenz 100.0 8.9E-33 3.1E-37 237.2 21.2 245 14-265 1-288 (452)
22 1xdi_A RV3303C-LPDA; reductase 100.0 1.6E-34 5.5E-39 250.8 10.2 250 13-266 2-324 (499)
23 3kd9_A Coenzyme A disulfide re 100.0 9.1E-33 3.1E-37 236.9 20.9 247 13-266 3-287 (449)
24 1xhc_A NADH oxidase /nitrite r 100.0 8.1E-33 2.8E-37 230.9 19.8 238 13-265 8-274 (367)
25 4fk1_A Putative thioredoxin re 100.0 3.5E-33 1.2E-37 227.9 17.0 239 12-264 5-277 (304)
26 2eq6_A Pyruvate dehydrogenase 100.0 3.8E-34 1.3E-38 246.2 11.4 249 13-266 6-316 (464)
27 3urh_A Dihydrolipoyl dehydroge 100.0 3.6E-34 1.2E-38 248.2 11.3 252 12-266 24-345 (491)
28 1q1r_A Putidaredoxin reductase 100.0 1.3E-32 4.5E-37 234.4 20.8 248 12-266 3-291 (431)
29 1ojt_A Surface protein; redox- 100.0 2.6E-34 8.8E-39 248.5 9.9 252 12-266 5-331 (482)
30 3klj_A NAD(FAD)-dependent dehy 100.0 3.2E-33 1.1E-37 234.5 15.8 235 12-266 8-272 (385)
31 3lad_A Dihydrolipoamide dehydr 100.0 1.2E-33 4.2E-38 244.1 13.2 252 12-266 2-325 (476)
32 1zmd_A Dihydrolipoyl dehydroge 100.0 9.1E-34 3.1E-38 244.7 12.2 251 13-266 6-327 (474)
33 3l8k_A Dihydrolipoyl dehydroge 100.0 6.8E-34 2.3E-38 244.9 11.0 245 13-266 4-315 (466)
34 3fbs_A Oxidoreductase; structu 100.0 1.2E-33 4E-38 229.8 11.7 239 13-266 2-272 (297)
35 3dk9_A Grase, GR, glutathione 100.0 7.2E-34 2.5E-38 245.6 10.9 251 12-267 19-339 (478)
36 1onf_A GR, grase, glutathione 100.0 7.4E-33 2.5E-37 240.2 17.0 244 13-263 2-316 (500)
37 1dxl_A Dihydrolipoamide dehydr 100.0 1.3E-33 4.5E-38 243.6 12.1 252 12-266 5-324 (470)
38 3hyw_A Sulfide-quinone reducta 100.0 3.8E-32 1.3E-36 231.6 20.8 251 14-267 3-302 (430)
39 1ebd_A E3BD, dihydrolipoamide 100.0 1.4E-33 4.8E-38 242.4 11.8 250 13-266 3-315 (455)
40 3ics_A Coenzyme A-disulfide re 100.0 4.1E-32 1.4E-36 240.2 21.3 248 12-266 35-325 (588)
41 2v3a_A Rubredoxin reductase; a 100.0 5.5E-32 1.9E-36 227.6 20.6 246 12-265 3-283 (384)
42 2bc0_A NADH oxidase; flavoprot 100.0 7.2E-32 2.5E-36 233.6 20.7 246 13-265 35-332 (490)
43 4b1b_A TRXR, thioredoxin reduc 100.0 2.5E-33 8.6E-38 243.2 11.1 252 13-268 42-368 (542)
44 2yqu_A 2-oxoglutarate dehydrog 100.0 5.1E-33 1.7E-37 238.9 12.6 251 13-266 1-309 (455)
45 3dgh_A TRXR-1, thioredoxin red 100.0 1.3E-32 4.3E-37 238.1 15.1 247 11-262 7-329 (483)
46 2a8x_A Dihydrolipoyl dehydroge 100.0 3.7E-33 1.3E-37 240.3 11.4 250 13-266 3-316 (464)
47 3qfa_A Thioredoxin reductase 1 100.0 1.2E-32 4.2E-37 239.7 14.1 247 12-262 31-357 (519)
48 3dgz_A Thioredoxin reductase 2 100.0 6.7E-33 2.3E-37 240.0 12.3 247 12-262 5-329 (488)
49 1m6i_A Programmed cell death p 100.0 1.1E-31 3.6E-36 232.4 18.8 251 12-266 10-325 (493)
50 3cgb_A Pyridine nucleotide-dis 100.0 1.4E-31 4.8E-36 231.2 19.5 248 13-266 36-325 (480)
51 1v59_A Dihydrolipoamide dehydr 100.0 6.6E-33 2.2E-37 239.7 10.8 250 12-266 4-332 (478)
52 3vrd_B FCCB subunit, flavocyto 100.0 1.5E-32 5E-37 232.6 12.6 247 13-263 2-298 (401)
53 1nhp_A NADH peroxidase; oxidor 100.0 4.3E-31 1.5E-35 226.4 21.0 245 14-265 1-287 (447)
54 4a5l_A Thioredoxin reductase; 100.0 1.8E-31 6.3E-36 218.6 17.4 244 10-265 1-290 (314)
55 1lvl_A Dihydrolipoamide dehydr 100.0 4E-32 1.4E-36 233.3 13.6 246 13-266 5-312 (458)
56 3f8d_A Thioredoxin reductase ( 100.0 1.2E-31 4.2E-36 220.4 15.3 240 12-264 14-292 (323)
57 2q7v_A Thioredoxin reductase; 100.0 1.5E-31 5E-36 220.3 15.6 240 12-264 7-289 (325)
58 2zbw_A Thioredoxin reductase; 100.0 1.1E-31 3.6E-36 222.0 14.7 248 10-265 2-293 (335)
59 3itj_A Thioredoxin reductase 1 100.0 3.4E-31 1.2E-35 219.1 15.8 241 11-263 20-311 (338)
60 4gcm_A TRXR, thioredoxin reduc 100.0 2.6E-31 8.8E-36 217.6 14.9 245 9-264 2-283 (312)
61 3h8l_A NADH oxidase; membrane 100.0 1.9E-30 6.7E-35 220.0 20.3 246 14-266 2-314 (409)
62 3r9u_A Thioredoxin reductase; 100.0 6.2E-31 2.1E-35 215.5 16.3 242 12-263 3-288 (315)
63 1trb_A Thioredoxin reductase; 100.0 1.1E-30 3.9E-35 214.5 17.7 242 13-264 5-291 (320)
64 2q0l_A TRXR, thioredoxin reduc 100.0 1.8E-30 6.1E-35 212.5 17.3 241 13-263 1-285 (311)
65 3cty_A Thioredoxin reductase; 100.0 1.7E-30 5.7E-35 213.4 15.4 241 11-264 14-293 (319)
66 3sx6_A Sulfide-quinone reducta 100.0 5.6E-30 1.9E-34 218.8 19.2 248 13-265 4-311 (437)
67 3lzw_A Ferredoxin--NADP reduct 100.0 1.1E-30 3.9E-35 215.4 14.5 240 13-265 7-291 (332)
68 3ab1_A Ferredoxin--NADP reduct 100.0 3.4E-30 1.2E-34 215.1 17.0 246 12-265 13-304 (360)
69 2a87_A TRXR, TR, thioredoxin r 100.0 3.5E-30 1.2E-34 212.9 16.4 242 10-264 11-293 (335)
70 3h28_A Sulfide-quinone reducta 100.0 1.8E-29 6.2E-34 215.3 21.2 247 13-265 2-300 (430)
71 1fl2_A Alkyl hydroperoxide red 100.0 9.4E-30 3.2E-34 208.1 16.8 239 13-265 1-283 (310)
72 2x8g_A Thioredoxin glutathione 100.0 6.6E-30 2.3E-34 226.4 16.2 248 11-262 105-436 (598)
73 1vdc_A NTR, NADPH dependent th 100.0 6.4E-29 2.2E-33 205.2 14.9 240 12-264 7-300 (333)
74 3d1c_A Flavin-containing putat 100.0 5.8E-28 2E-32 202.1 18.9 249 13-268 4-317 (369)
75 1hyu_A AHPF, alkyl hydroperoxi 100.0 4E-28 1.4E-32 211.3 15.9 241 11-265 210-494 (521)
76 4a9w_A Monooxygenase; baeyer-v 100.0 1.4E-27 4.9E-32 198.7 15.2 237 13-262 3-327 (357)
77 3s5w_A L-ornithine 5-monooxyge 99.9 6.5E-27 2.2E-31 201.5 13.3 248 13-266 30-424 (463)
78 2vdc_G Glutamate synthase [NAD 99.9 1.5E-27 5.2E-32 203.8 8.9 240 11-266 120-424 (456)
79 1lqt_A FPRA; NADP+ derivative, 99.9 1.2E-25 4E-30 192.4 11.4 241 13-265 3-365 (456)
80 1y56_A Hypothetical protein PH 99.9 3.2E-26 1.1E-30 198.1 7.5 233 13-264 108-356 (493)
81 3k30_A Histamine dehydrogenase 99.9 1.2E-26 4.1E-31 208.3 4.4 230 11-265 389-655 (690)
82 2xve_A Flavin-containing monoo 99.9 1.2E-24 4E-29 186.9 15.4 228 14-263 3-319 (464)
83 1gte_A Dihydropyrimidine dehyd 99.9 6.7E-26 2.3E-30 210.8 8.2 241 12-266 186-488 (1025)
84 2gag_A Heterotetrameric sarcos 99.9 8.2E-25 2.8E-29 202.2 13.7 234 13-265 128-424 (965)
85 1o94_A Tmadh, trimethylamine d 99.9 2.2E-26 7.5E-31 207.4 3.1 235 11-263 387-678 (729)
86 1cjc_A Protein (adrenodoxin re 99.9 9.9E-25 3.4E-29 186.9 11.8 241 12-265 5-373 (460)
87 2gv8_A Monooxygenase; FMO, FAD 99.9 6.2E-24 2.1E-28 182.0 13.7 230 12-264 5-341 (447)
88 3gwf_A Cyclohexanone monooxyge 99.9 6.2E-23 2.1E-27 178.9 13.8 242 13-262 8-433 (540)
89 1ps9_A 2,4-dienoyl-COA reducta 99.9 4.2E-23 1.4E-27 184.9 11.9 223 11-265 371-654 (671)
90 2ywl_A Thioredoxin reductase r 99.9 5.7E-21 1.9E-25 143.7 13.3 93 165-265 57-149 (180)
91 3uox_A Otemo; baeyer-villiger 99.9 3.7E-21 1.3E-25 167.9 12.7 145 12-158 8-220 (545)
92 4ap3_A Steroid monooxygenase; 99.8 2.1E-20 7.1E-25 163.3 11.6 143 12-158 20-226 (549)
93 1w4x_A Phenylacetone monooxyge 99.8 1E-19 3.5E-24 159.3 12.8 145 12-158 15-221 (542)
94 4b63_A L-ornithine N5 monooxyg 99.7 5.7E-16 1.9E-20 134.1 19.8 166 98-263 199-460 (501)
95 3k7m_X 6-hydroxy-L-nicotine ox 99.6 6.4E-17 2.2E-21 137.9 1.6 95 165-262 205-307 (431)
96 2e5v_A L-aspartate oxidase; ar 99.6 1.6E-15 5.6E-20 130.3 6.0 144 98-262 161-340 (472)
97 2cul_A Glucose-inhibited divis 99.5 7.5E-14 2.6E-18 108.9 10.7 56 165-221 69-126 (232)
98 3v76_A Flavoprotein; structura 99.5 1.2E-13 3.9E-18 116.8 12.1 57 164-221 132-188 (417)
99 3dme_A Conserved exported prot 99.4 1.2E-12 4.2E-17 108.9 11.1 64 164-228 150-216 (369)
100 3nyc_A D-arginine dehydrogenas 99.4 1.6E-13 5.5E-18 114.8 5.4 56 164-220 154-209 (381)
101 4dgk_A Phytoene dehydrogenase; 99.4 1.3E-12 4.6E-17 113.3 11.3 55 165-219 222-277 (501)
102 1ryi_A Glycine oxidase; flavop 99.4 7.7E-12 2.6E-16 104.7 13.1 62 164-227 164-225 (382)
103 2gf3_A MSOX, monomeric sarcosi 99.4 2E-11 6.8E-16 102.4 15.2 77 147-227 135-211 (389)
104 1y56_B Sarcosine oxidase; dehy 99.4 9.9E-12 3.4E-16 104.0 13.3 55 165-220 150-205 (382)
105 1rp0_A ARA6, thiazole biosynth 99.4 2.1E-12 7.1E-17 103.8 8.7 97 165-262 120-244 (284)
106 3ps9_A TRNA 5-methylaminomethy 99.3 2.2E-11 7.7E-16 109.3 15.5 57 164-220 417-473 (676)
107 2gqf_A Hypothetical protein HI 99.3 1.1E-11 3.7E-16 104.3 12.2 58 163-221 108-169 (401)
108 2i0z_A NAD(FAD)-utilizing dehy 99.3 9.1E-12 3.1E-16 106.5 11.7 57 164-220 134-191 (447)
109 3dje_A Fructosyl amine: oxygen 99.3 1.1E-11 3.9E-16 105.6 12.3 56 165-220 162-221 (438)
110 3pvc_A TRNA 5-methylaminomethy 99.3 6.2E-11 2.1E-15 106.6 16.3 57 164-220 412-469 (689)
111 1s3e_A Amine oxidase [flavin-c 99.3 1.1E-11 3.9E-16 108.0 11.2 50 170-219 218-267 (520)
112 3nlc_A Uncharacterized protein 99.3 3.8E-12 1.3E-16 110.5 8.0 58 164-221 220-278 (549)
113 2oln_A NIKD protein; flavoprot 99.3 2.3E-11 7.8E-16 102.4 12.4 55 165-220 154-208 (397)
114 2x3n_A Probable FAD-dependent 99.3 1.6E-11 5.5E-16 103.4 11.4 57 165-221 108-167 (399)
115 4gde_A UDP-galactopyranose mut 99.3 2.1E-12 7.2E-17 112.3 5.6 52 165-218 223-274 (513)
116 3ka7_A Oxidoreductase; structu 99.3 1.6E-11 5.4E-16 104.3 10.5 61 164-225 196-257 (425)
117 3nrn_A Uncharacterized protein 99.3 1.7E-11 5.8E-16 104.0 10.6 60 164-225 189-248 (421)
118 2vou_A 2,6-dihydroxypyridine h 99.3 6.4E-11 2.2E-15 99.7 13.4 54 166-221 101-154 (397)
119 3rp8_A Flavoprotein monooxygen 99.3 3.4E-11 1.2E-15 101.7 11.5 55 165-221 128-182 (407)
120 2uzz_A N-methyl-L-tryptophan o 99.2 2.1E-10 7.2E-15 95.6 15.1 55 165-220 150-204 (372)
121 3alj_A 2-methyl-3-hydroxypyrid 99.2 1.1E-10 3.9E-15 97.6 13.4 54 165-221 108-161 (379)
122 3cgv_A Geranylgeranyl reductas 99.2 4.1E-11 1.4E-15 100.7 10.5 56 165-220 103-162 (397)
123 3nix_A Flavoprotein/dehydrogen 99.2 3.5E-11 1.2E-15 102.0 9.7 56 165-220 107-166 (421)
124 2gag_B Heterotetrameric sarcos 99.2 3.8E-11 1.3E-15 101.3 9.7 55 165-220 175-230 (405)
125 3i6d_A Protoporphyrinogen oxid 99.2 5E-11 1.7E-15 102.4 9.5 40 179-218 248-287 (470)
126 3nks_A Protoporphyrinogen oxid 99.2 1.2E-10 4.2E-15 100.3 11.9 54 165-219 235-289 (477)
127 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 4.5E-11 1.6E-15 98.6 8.4 48 171-218 116-163 (342)
128 1yvv_A Amine oxidase, flavin-c 99.2 2.4E-10 8.1E-15 93.9 12.7 51 169-220 111-162 (336)
129 3oz2_A Digeranylgeranylglycero 99.2 5.2E-11 1.8E-15 99.9 8.7 56 165-220 103-162 (397)
130 3fmw_A Oxygenase; mithramycin, 99.2 1.1E-10 3.8E-15 102.4 10.8 56 165-220 149-207 (570)
131 3i3l_A Alkylhalidase CMLS; fla 99.2 1.3E-10 4.4E-15 102.3 11.0 56 165-220 129-188 (591)
132 3ihg_A RDME; flavoenzyme, anth 99.2 2.1E-10 7.1E-15 100.3 11.9 56 165-220 121-183 (535)
133 3atr_A Conserved archaeal prot 99.2 8.2E-11 2.8E-15 100.8 8.7 57 165-221 101-163 (453)
134 2qa2_A CABE, polyketide oxygen 99.2 2.8E-10 9.4E-15 98.5 12.0 56 165-220 108-166 (499)
135 1pj5_A N,N-dimethylglycine oxi 99.1 1.5E-10 5.1E-15 106.3 10.4 55 165-220 152-207 (830)
136 2yg5_A Putrescine oxidase; oxi 99.1 2.6E-10 9E-15 97.6 10.9 40 12-51 4-44 (453)
137 3p1w_A Rabgdi protein; GDI RAB 99.1 8.9E-10 3E-14 93.9 13.0 56 164-219 256-313 (475)
138 3axb_A Putative oxidoreductase 99.1 5.4E-11 1.8E-15 101.7 5.6 61 165-227 182-260 (448)
139 1k0i_A P-hydroxybenzoate hydro 99.1 3E-10 1E-14 95.5 10.0 57 165-221 104-164 (394)
140 3c4n_A Uncharacterized protein 99.1 3.1E-10 1.1E-14 95.7 9.6 55 165-220 173-236 (405)
141 2xdo_A TETX2 protein; tetracyc 99.1 3.8E-10 1.3E-14 95.0 9.9 54 166-221 130-183 (398)
142 2qa1_A PGAE, polyketide oxygen 99.1 3.6E-10 1.2E-14 97.8 9.9 56 165-220 107-165 (500)
143 3e1t_A Halogenase; flavoprotei 99.1 4.4E-10 1.5E-14 97.7 10.4 56 165-220 112-172 (512)
144 3ces_A MNMG, tRNA uridine 5-ca 99.1 2.5E-10 8.4E-15 100.3 8.5 140 12-153 27-220 (651)
145 2bry_A NEDD9 interacting prote 99.1 7.6E-10 2.6E-14 95.7 11.2 58 165-222 167-232 (497)
146 1y0p_A Fumarate reductase flav 99.0 7.1E-10 2.4E-14 97.6 9.6 57 164-220 255-317 (571)
147 4at0_A 3-ketosteroid-delta4-5a 99.0 2.9E-09 9.8E-14 92.5 13.2 56 165-220 203-264 (510)
148 3kkj_A Amine oxidase, flavin-c 99.0 2.1E-10 7.1E-15 91.5 5.4 38 13-50 2-40 (336)
149 3da1_A Glycerol-3-phosphate de 99.0 1.3E-09 4.4E-14 95.6 10.8 57 164-220 170-232 (561)
150 3c96_A Flavin-containing monoo 99.0 1E-09 3.6E-14 92.7 9.8 56 165-221 108-170 (410)
151 2gmh_A Electron transfer flavo 99.0 8.6E-10 2.9E-14 97.2 8.8 57 165-221 145-218 (584)
152 1qo8_A Flavocytochrome C3 fuma 99.0 3.1E-10 1.1E-14 99.8 5.9 56 165-220 251-312 (566)
153 2qcu_A Aerobic glycerol-3-phos 99.0 5.6E-09 1.9E-13 90.5 13.2 56 165-220 150-210 (501)
154 2vvm_A Monoamine oxidase N; FA 99.0 2.1E-09 7.3E-14 93.0 10.3 55 165-219 256-311 (495)
155 4hb9_A Similarities with proba 99.0 5.8E-09 2E-13 87.9 12.5 44 177-220 122-166 (412)
156 1d4d_A Flavocytochrome C fumar 99.0 3E-09 1E-13 93.6 10.8 56 165-220 256-317 (572)
157 3pl8_A Pyranose 2-oxidase; sub 99.0 3.3E-10 1.1E-14 100.4 4.2 60 177-236 273-340 (623)
158 2e4g_A Tryptophan halogenase; 99.0 2.6E-09 9E-14 93.6 9.8 55 165-220 195-252 (550)
159 1d5t_A Guanine nucleotide diss 99.0 3.6E-09 1.2E-13 90.0 10.4 57 164-220 234-290 (433)
160 2aqj_A Tryptophan halogenase, 98.9 4.4E-09 1.5E-13 92.0 10.8 56 165-221 166-223 (538)
161 3cp8_A TRNA uridine 5-carboxym 98.9 7.3E-09 2.5E-13 91.0 11.7 56 165-221 118-175 (641)
162 2zxi_A TRNA uridine 5-carboxym 98.9 7.5E-10 2.6E-14 96.9 5.5 135 12-150 26-216 (637)
163 3lov_A Protoporphyrinogen oxid 98.9 7.9E-09 2.7E-13 89.0 11.8 40 179-219 249-288 (475)
164 2rgh_A Alpha-glycerophosphate 98.9 3.9E-09 1.3E-13 92.8 9.5 57 164-220 188-250 (571)
165 2wdq_A Succinate dehydrogenase 98.9 8.4E-09 2.9E-13 90.9 11.6 55 165-219 144-205 (588)
166 1chu_A Protein (L-aspartate ox 98.9 4.3E-09 1.5E-13 91.8 8.8 39 11-49 6-44 (540)
167 2weu_A Tryptophan 5-halogenase 98.9 8.3E-09 2.8E-13 89.7 9.5 55 165-220 174-230 (511)
168 2bs2_A Quinol-fumarate reducta 98.9 4.2E-09 1.4E-13 93.7 7.5 55 165-219 159-219 (660)
169 2r0c_A REBC; flavin adenine di 98.8 2.8E-08 9.5E-13 87.1 12.4 52 166-220 140-196 (549)
170 2dkh_A 3-hydroxybenzoate hydro 98.8 2.8E-08 9.6E-13 88.6 11.7 56 165-220 142-211 (639)
171 2h88_A Succinate dehydrogenase 98.8 9.2E-09 3.1E-13 90.9 8.1 56 165-220 156-217 (621)
172 1kf6_A Fumarate reductase flav 98.8 8.6E-09 3E-13 91.0 7.4 55 165-219 135-196 (602)
173 4gut_A Lysine-specific histone 98.8 2.3E-08 8E-13 90.4 10.2 42 177-218 542-583 (776)
174 2pyx_A Tryptophan halogenase; 98.8 1.2E-08 4.1E-13 88.9 7.6 55 165-220 176-233 (526)
175 2gjc_A Thiazole biosynthetic e 98.7 5.5E-08 1.9E-12 78.7 10.0 37 12-48 64-103 (326)
176 3fpz_A Thiazole biosynthetic e 98.7 8.9E-09 3E-13 84.2 4.5 39 12-50 64-105 (326)
177 1c0p_A D-amino acid oxidase; a 98.6 2.7E-08 9.4E-13 82.5 5.1 38 9-46 2-40 (363)
178 2bcg_G Secretory pathway GDP d 98.6 3.6E-08 1.2E-12 84.3 5.6 55 165-220 243-300 (453)
179 1v0j_A UDP-galactopyranose mut 98.6 3.8E-08 1.3E-12 82.7 5.5 42 11-52 5-48 (399)
180 2e1m_A L-glutamate oxidase; L- 98.6 5E-08 1.7E-12 80.9 5.5 42 11-52 42-85 (376)
181 1rsg_A FMS1 protein; FAD bindi 98.6 2.8E-08 9.6E-13 86.5 4.0 39 13-51 8-48 (516)
182 3hdq_A UDP-galactopyranose mut 98.6 6.1E-08 2.1E-12 81.0 5.6 42 11-52 27-69 (397)
183 2b9w_A Putative aminooxidase; 98.6 5.6E-08 1.9E-12 82.4 5.5 53 166-219 205-257 (424)
184 2jae_A L-amino acid oxidase; o 98.5 9.5E-08 3.2E-12 82.5 5.6 41 10-50 8-49 (489)
185 1sez_A Protoporphyrinogen oxid 98.5 8.1E-08 2.8E-12 83.3 5.1 40 11-50 11-51 (504)
186 3ihm_A Styrene monooxygenase A 98.5 5.4E-08 1.8E-12 82.7 3.9 34 12-45 21-55 (430)
187 4dsg_A UDP-galactopyranose mut 98.5 1.5E-07 5.1E-12 81.1 5.4 44 10-53 6-51 (484)
188 2ivd_A PPO, PPOX, protoporphyr 98.4 1.4E-07 4.6E-12 81.3 4.8 51 166-219 240-293 (478)
189 1i8t_A UDP-galactopyranose mut 98.4 2E-07 7E-12 77.4 5.3 38 14-51 2-40 (367)
190 2bi7_A UDP-galactopyranose mut 98.4 3.3E-07 1.1E-11 76.6 5.3 39 13-51 3-42 (384)
191 3g3e_A D-amino-acid oxidase; F 98.4 2.5E-07 8.6E-12 76.3 4.5 44 165-220 143-186 (351)
192 3jsk_A Cypbp37 protein; octame 98.4 2.6E-07 8.9E-12 75.2 4.3 37 12-48 78-117 (344)
193 2iid_A L-amino-acid oxidase; f 98.3 3.6E-07 1.2E-11 79.0 5.2 41 11-51 31-72 (498)
194 3c4a_A Probable tryptophan hyd 98.3 4.6E-07 1.6E-11 75.7 4.6 34 14-47 1-37 (381)
195 2xve_A Flavin-containing monoo 98.2 5.3E-06 1.8E-10 71.1 9.8 84 13-118 197-281 (464)
196 2yqu_A 2-oxoglutarate dehydrog 98.2 1.7E-06 5.9E-11 74.0 6.7 95 13-116 167-267 (455)
197 3g5s_A Methylenetetrahydrofola 98.2 1.2E-06 4.2E-11 72.1 4.9 34 13-46 1-35 (443)
198 2gqw_A Ferredoxin reductase; f 98.2 3.1E-06 1.1E-10 71.3 7.4 96 13-116 145-242 (408)
199 1b37_A Protein (polyamine oxid 98.2 1.5E-06 5.2E-11 74.7 4.9 41 178-218 228-268 (472)
200 4eqs_A Coenzyme A disulfide re 98.1 3.5E-06 1.2E-10 71.6 6.9 95 13-116 147-243 (437)
201 1xhc_A NADH oxidase /nitrite r 98.1 2.2E-06 7.5E-11 71.2 5.5 91 14-115 144-236 (367)
202 1pn0_A Phenol 2-monooxygenase; 98.1 8.2E-07 2.8E-11 79.4 2.9 35 12-46 7-47 (665)
203 2z3y_A Lysine-specific histone 98.1 2.2E-06 7.7E-11 76.6 5.4 40 11-50 105-145 (662)
204 2v3a_A Rubredoxin reductase; a 98.1 4.7E-06 1.6E-10 69.6 6.7 95 13-115 145-245 (384)
205 3gyx_A Adenylylsulfate reducta 98.1 1.3E-06 4.3E-11 77.9 3.3 34 13-46 22-62 (662)
206 2xag_A Lysine-specific histone 98.1 2.8E-06 9.5E-11 77.6 5.6 40 11-50 276-316 (852)
207 2gv8_A Monooxygenase; FMO, FAD 98.1 2.2E-05 7.5E-10 66.9 10.6 80 13-117 212-296 (447)
208 2eq6_A Pyruvate dehydrogenase 98.1 4.8E-06 1.7E-10 71.3 6.5 96 13-117 169-275 (464)
209 3ef6_A Toluene 1,2-dioxygenase 98.1 4.7E-06 1.6E-10 70.3 6.2 95 13-115 143-243 (410)
210 1nhp_A NADH peroxidase; oxidor 98.1 6.5E-06 2.2E-10 70.2 7.1 97 12-117 148-250 (447)
211 1ges_A Glutathione reductase; 98.1 2.9E-06 9.9E-11 72.4 4.8 95 13-116 167-268 (450)
212 3fg2_P Putative rubredoxin red 98.0 8E-06 2.8E-10 68.7 6.8 95 13-115 142-243 (404)
213 1lvl_A Dihydrolipoamide dehydr 98.0 3.8E-06 1.3E-10 71.9 4.7 95 13-116 171-271 (458)
214 1jnr_A Adenylylsulfate reducta 98.0 3.5E-06 1.2E-10 75.1 4.7 34 13-46 22-60 (643)
215 2r9z_A Glutathione amide reduc 98.0 5.5E-06 1.9E-10 71.0 5.4 95 13-116 166-267 (463)
216 4b1b_A TRXR, thioredoxin reduc 98.0 7.4E-06 2.5E-10 71.3 6.2 96 11-118 221-324 (542)
217 3lxd_A FAD-dependent pyridine 98.0 1.2E-05 4.1E-10 67.9 7.4 95 13-115 152-253 (415)
218 4a9w_A Monooxygenase; baeyer-v 98.0 1.8E-05 6E-10 65.0 8.2 89 129-220 11-132 (357)
219 3fbs_A Oxidoreductase; structu 98.0 1.4E-05 4.7E-10 64.0 7.3 87 13-116 141-229 (297)
220 3gwf_A Cyclohexanone monooxyge 98.0 1.9E-05 6.5E-10 68.9 8.3 35 12-46 177-212 (540)
221 1kdg_A CDH, cellobiose dehydro 98.0 5.3E-06 1.8E-10 72.6 4.8 37 11-47 5-42 (546)
222 1onf_A GR, grase, glutathione 98.0 9.9E-06 3.4E-10 70.1 6.2 95 13-116 176-278 (500)
223 1ebd_A E3BD, dihydrolipoamide 98.0 9.5E-06 3.2E-10 69.3 5.9 96 12-116 169-273 (455)
224 1q1r_A Putidaredoxin reductase 97.9 1.7E-05 5.7E-10 67.3 7.2 96 12-115 148-252 (431)
225 3f8d_A Thioredoxin reductase ( 97.9 2.4E-05 8.3E-10 63.3 7.7 91 129-222 23-127 (323)
226 3t37_A Probable dehydrogenase; 97.9 6.7E-06 2.3E-10 71.6 4.5 36 12-47 16-53 (526)
227 2hqm_A GR, grase, glutathione 97.9 1.2E-05 4E-10 69.2 5.6 95 12-115 184-287 (479)
228 3ayj_A Pro-enzyme of L-phenyla 97.9 5.1E-06 1.7E-10 74.1 3.1 35 13-47 56-100 (721)
229 1v59_A Dihydrolipoamide dehydr 97.9 8.3E-06 2.8E-10 70.2 4.4 95 13-116 183-290 (478)
230 3ics_A Coenzyme A-disulfide re 97.9 2.8E-05 9.5E-10 68.7 7.5 93 13-116 187-285 (588)
231 3ic9_A Dihydrolipoamide dehydr 97.9 2.4E-05 8.2E-10 67.5 6.7 95 12-117 173-278 (492)
232 2wpf_A Trypanothione reductase 97.8 1.1E-05 3.7E-10 69.8 4.3 95 13-116 191-295 (495)
233 3klj_A NAD(FAD)-dependent dehy 97.8 9.4E-05 3.2E-09 61.7 9.8 90 129-222 17-118 (385)
234 1fec_A Trypanothione reductase 97.8 1.2E-05 4E-10 69.5 4.3 93 13-116 187-291 (490)
235 1ojt_A Surface protein; redox- 97.8 1.1E-05 3.8E-10 69.5 4.1 95 13-116 185-289 (482)
236 1xdi_A RV3303C-LPDA; reductase 97.8 3.6E-05 1.2E-09 66.6 7.1 96 12-116 181-282 (499)
237 2bc0_A NADH oxidase; flavoprot 97.8 2.1E-05 7.3E-10 67.8 5.7 96 12-116 193-294 (490)
238 3lzw_A Ferredoxin--NADP reduct 97.8 2.6E-05 9.1E-10 63.4 6.0 87 129-218 15-121 (332)
239 1ju2_A HydroxynitrIle lyase; f 97.8 1.2E-05 4.1E-10 70.1 4.0 36 12-47 25-60 (536)
240 2zbw_A Thioredoxin reductase; 97.8 6.5E-05 2.2E-09 61.2 8.2 89 129-219 13-120 (335)
241 4a5l_A Thioredoxin reductase; 97.8 1.3E-05 4.5E-10 64.7 3.9 35 13-47 152-187 (314)
242 1zmd_A Dihydrolipoyl dehydroge 97.8 2.2E-05 7.5E-10 67.4 5.5 97 13-117 178-286 (474)
243 3iwa_A FAD-dependent pyridine 97.8 3.9E-05 1.3E-09 65.9 6.9 96 13-116 159-261 (472)
244 3ntd_A FAD-dependent pyridine 97.8 1.9E-05 6.4E-10 69.4 4.8 95 13-116 151-270 (565)
245 3kd9_A Coenzyme A disulfide re 97.8 2.8E-05 9.7E-10 66.3 5.7 94 13-115 148-246 (449)
246 3qvp_A Glucose oxidase; oxidor 97.8 1.8E-05 6.1E-10 69.5 4.5 34 12-45 18-53 (583)
247 2a8x_A Dihydrolipoyl dehydroge 97.7 3.2E-05 1.1E-09 66.2 5.7 96 13-117 171-275 (464)
248 3o0h_A Glutathione reductase; 97.7 4.1E-05 1.4E-09 66.0 6.2 97 12-117 190-292 (484)
249 3ab1_A Ferredoxin--NADP reduct 97.7 9.4E-05 3.2E-09 61.0 8.2 89 129-219 22-130 (360)
250 1mo9_A ORF3; nucleotide bindin 97.7 3.1E-05 1.1E-09 67.3 5.2 94 14-116 215-319 (523)
251 2cdu_A NADPH oxidase; flavoenz 97.7 2.7E-05 9.1E-10 66.5 4.5 96 13-116 149-250 (452)
252 3lad_A Dihydrolipoamide dehydr 97.7 6.7E-05 2.3E-09 64.4 6.9 94 12-116 179-283 (476)
253 2jbv_A Choline oxidase; alcoho 97.7 3.1E-05 1.1E-09 67.6 4.8 40 9-48 9-50 (546)
254 3q9t_A Choline dehydrogenase a 97.7 3E-05 1E-09 68.0 4.6 35 12-46 5-41 (577)
255 3cgb_A Pyridine nucleotide-dis 97.7 2.9E-05 1E-09 66.8 4.5 95 12-116 185-285 (480)
256 2qae_A Lipoamide, dihydrolipoy 97.7 4.6E-05 1.6E-09 65.3 5.7 98 12-117 173-280 (468)
257 3l8k_A Dihydrolipoyl dehydroge 97.7 5E-05 1.7E-09 65.1 5.8 37 12-48 171-208 (466)
258 1fl2_A Alkyl hydroperoxide red 97.7 0.00015 5.1E-09 58.4 8.3 92 129-222 9-117 (310)
259 3urh_A Dihydrolipoyl dehydroge 97.7 7.4E-05 2.5E-09 64.5 6.7 95 12-117 197-304 (491)
260 2a87_A TRXR, TR, thioredoxin r 97.7 0.00012 4.2E-09 59.7 7.7 90 13-116 155-255 (335)
261 1vg0_A RAB proteins geranylger 97.7 5E-05 1.7E-09 66.9 5.6 57 164-220 378-437 (650)
262 4dna_A Probable glutathione re 97.6 4.4E-05 1.5E-09 65.3 5.1 93 12-116 169-271 (463)
263 3fim_B ARYL-alcohol oxidase; A 97.6 2.4E-05 8.2E-10 68.5 3.4 35 13-47 2-38 (566)
264 3r9u_A Thioredoxin reductase; 97.6 8.6E-05 2.9E-09 59.8 6.3 90 13-116 147-247 (315)
265 3sx6_A Sulfide-quinone reducta 97.6 6.4E-05 2.2E-09 63.8 5.7 94 129-225 12-117 (437)
266 1m6i_A Programmed cell death p 97.6 8.4E-05 2.9E-09 64.1 6.5 96 13-116 180-285 (493)
267 1dxl_A Dihydrolipoamide dehydr 97.6 3.8E-05 1.3E-09 65.9 4.2 95 13-116 177-282 (470)
268 3itj_A Thioredoxin reductase 1 97.6 0.00011 3.6E-09 59.9 6.6 91 129-222 30-144 (338)
269 3dk9_A Grase, GR, glutathione 97.6 6.5E-05 2.2E-09 64.6 5.6 35 13-47 187-222 (478)
270 2q0l_A TRXR, thioredoxin reduc 97.6 0.00019 6.6E-09 57.7 7.9 91 129-222 9-116 (311)
271 4gcm_A TRXR, thioredoxin reduc 97.6 5E-05 1.7E-09 61.3 4.4 36 13-48 145-181 (312)
272 1coy_A Cholesterol oxidase; ox 97.6 5E-05 1.7E-09 65.7 4.6 36 12-47 10-46 (507)
273 1n4w_A CHOD, cholesterol oxida 97.6 5.1E-05 1.7E-09 65.7 4.5 36 13-48 5-41 (504)
274 1zk7_A HGII, reductase, mercur 97.5 9.5E-05 3.3E-09 63.3 5.6 93 13-116 176-274 (467)
275 3d1c_A Flavin-containing putat 97.5 0.00034 1.2E-08 57.7 8.7 89 129-221 12-144 (369)
276 1gpe_A Protein (glucose oxidas 97.5 7E-05 2.4E-09 66.0 4.7 37 11-47 22-60 (587)
277 3dgz_A Thioredoxin reductase 2 97.5 0.00014 4.8E-09 62.7 6.5 96 12-117 184-291 (488)
278 3dgh_A TRXR-1, thioredoxin red 97.5 0.00012 4E-09 63.1 6.0 96 12-117 186-293 (483)
279 1vdc_A NTR, NADPH dependent th 97.5 0.00028 9.6E-09 57.4 7.9 90 129-222 16-126 (333)
280 4ap3_A Steroid monooxygenase; 97.5 0.00023 7.8E-09 62.2 7.4 91 129-221 29-162 (549)
281 3oc4_A Oxidoreductase, pyridin 97.5 0.00027 9.2E-09 60.3 7.4 94 129-222 10-117 (452)
282 2q7v_A Thioredoxin reductase; 97.4 0.00053 1.8E-08 55.6 8.7 91 129-222 16-125 (325)
283 3s5w_A L-ornithine 5-monooxyge 97.4 0.00013 4.4E-09 62.4 4.9 35 13-47 227-264 (463)
284 3hyw_A Sulfide-quinone reducta 97.4 8.9E-05 3.1E-09 62.8 3.9 89 129-220 10-109 (430)
285 3qfa_A Thioredoxin reductase 1 97.4 0.00035 1.2E-08 60.7 7.6 34 12-45 209-243 (519)
286 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00067 2.3E-08 58.9 8.1 91 129-221 220-327 (521)
287 1trb_A Thioredoxin reductase; 97.3 0.00067 2.3E-08 54.7 7.6 90 129-222 13-118 (320)
288 3h8l_A NADH oxidase; membrane 97.3 0.00029 1E-08 59.2 5.5 92 129-223 9-116 (409)
289 3h28_A Sulfide-quinone reducta 97.2 0.00018 6.3E-09 60.9 3.7 91 129-222 10-111 (430)
290 3uox_A Otemo; baeyer-villiger 97.2 0.00034 1.2E-08 61.0 5.5 88 129-218 17-145 (545)
291 3k30_A Histamine dehydrogenase 97.2 0.00057 2E-08 61.5 7.0 96 13-116 523-627 (690)
292 3cty_A Thioredoxin reductase; 97.2 0.00085 2.9E-08 54.2 7.3 89 129-221 24-127 (319)
293 4fk1_A Putative thioredoxin re 97.2 0.0013 4.4E-08 52.8 8.1 92 129-222 14-119 (304)
294 2x8g_A Thioredoxin glutathione 97.2 0.00046 1.6E-08 61.0 5.8 32 13-44 286-318 (598)
295 3vrd_B FCCB subunit, flavocyto 97.1 0.0009 3.1E-08 56.0 7.0 92 129-223 10-111 (401)
296 4g6h_A Rotenone-insensitive NA 97.1 0.00044 1.5E-08 59.7 4.6 91 14-114 218-333 (502)
297 3fwz_A Inner membrane protein 97.1 0.00064 2.2E-08 47.9 4.5 35 12-46 6-41 (140)
298 2g1u_A Hypothetical protein TM 96.9 0.001 3.5E-08 47.7 4.7 34 13-46 19-53 (155)
299 2vdc_G Glutamate synthase [NAD 96.9 0.0017 5.8E-08 55.4 6.7 36 12-47 263-300 (456)
300 3llv_A Exopolyphosphatase-rela 96.8 0.00097 3.3E-08 46.9 3.9 34 13-46 6-40 (141)
301 3ic5_A Putative saccharopine d 96.8 0.0012 4.2E-08 44.6 4.0 33 13-45 5-39 (118)
302 4b63_A L-ornithine N5 monooxyg 96.8 0.0034 1.2E-07 54.2 7.5 35 12-46 245-282 (501)
303 1lss_A TRK system potassium up 96.8 0.0015 5.1E-08 45.7 4.4 32 14-45 5-37 (140)
304 1w4x_A Phenylacetone monooxyge 96.7 0.0046 1.6E-07 53.9 8.3 89 129-219 24-153 (542)
305 3ces_A MNMG, tRNA uridine 5-ca 96.7 0.0068 2.3E-07 53.6 8.8 55 166-221 126-182 (651)
306 1ps9_A 2,4-dienoyl-COA reducta 96.7 0.004 1.4E-07 55.8 7.5 27 13-39 494-521 (671)
307 1id1_A Putative potassium chan 96.7 0.0026 9E-08 45.4 5.1 33 13-45 3-36 (153)
308 2gag_A Heterotetrameric sarcos 96.6 0.0015 5.3E-08 60.9 4.4 35 14-48 285-320 (965)
309 1o94_A Tmadh, trimethylamine d 96.5 0.0011 3.9E-08 59.9 2.8 33 13-45 528-563 (729)
310 1f0y_A HCDH, L-3-hydroxyacyl-C 96.5 0.0033 1.1E-07 50.4 5.2 38 9-46 11-49 (302)
311 1pzg_A LDH, lactate dehydrogen 96.5 0.0034 1.2E-07 51.0 5.2 38 9-46 5-44 (331)
312 3jsk_A Cypbp37 protein; octame 96.4 0.0088 3E-07 48.7 7.0 93 129-221 87-252 (344)
313 3pid_A UDP-glucose 6-dehydroge 96.3 0.0038 1.3E-07 52.5 4.9 35 12-46 35-69 (432)
314 3lk7_A UDP-N-acetylmuramoylala 96.3 0.0036 1.2E-07 53.3 4.7 34 12-45 8-42 (451)
315 2hmt_A YUAA protein; RCK, KTN, 96.3 0.0035 1.2E-07 43.9 3.9 33 13-45 6-39 (144)
316 2zxi_A TRNA uridine 5-carboxym 96.3 0.017 5.9E-07 50.9 8.8 56 166-222 125-182 (637)
317 3c85_A Putative glutathione-re 96.2 0.0053 1.8E-07 45.2 4.7 34 13-46 39-74 (183)
318 4e12_A Diketoreductase; oxidor 96.2 0.0063 2.2E-07 48.3 5.1 34 13-46 4-38 (283)
319 3l4b_C TRKA K+ channel protien 96.1 0.0032 1.1E-07 47.9 3.2 32 15-46 2-34 (218)
320 3dfz_A SIRC, precorrin-2 dehyd 96.1 0.0071 2.4E-07 46.0 5.0 35 12-46 30-65 (223)
321 3k96_A Glycerol-3-phosphate de 96.1 0.0066 2.3E-07 49.9 5.1 38 9-46 25-63 (356)
322 2x5o_A UDP-N-acetylmuramoylala 96.1 0.0036 1.2E-07 53.1 3.6 34 13-46 5-39 (439)
323 4g65_A TRK system potassium up 96.1 0.0033 1.1E-07 53.6 3.2 34 13-46 3-37 (461)
324 1y56_A Hypothetical protein PH 96.1 0.0066 2.3E-07 52.3 5.2 90 129-222 116-221 (493)
325 4dio_A NAD(P) transhydrogenase 96.0 0.0074 2.5E-07 50.1 5.0 34 13-46 190-224 (405)
326 2ewd_A Lactate dehydrogenase,; 95.9 0.0092 3.1E-07 48.2 5.2 34 13-46 4-39 (317)
327 3i83_A 2-dehydropantoate 2-red 95.9 0.0085 2.9E-07 48.5 4.8 32 14-45 3-35 (320)
328 3eag_A UDP-N-acetylmuramate:L- 95.9 0.0086 2.9E-07 48.6 4.8 35 12-46 3-39 (326)
329 3p2y_A Alanine dehydrogenase/p 95.9 0.008 2.7E-07 49.5 4.5 34 13-46 184-218 (381)
330 1y6j_A L-lactate dehydrogenase 95.8 0.0092 3.2E-07 48.2 4.7 37 9-45 3-42 (318)
331 3tl2_A Malate dehydrogenase; c 95.8 0.01 3.6E-07 47.7 5.0 35 11-45 6-42 (315)
332 1kyq_A Met8P, siroheme biosynt 95.8 0.0057 1.9E-07 48.1 3.2 34 12-45 12-46 (274)
333 3ado_A Lambda-crystallin; L-gu 95.8 0.0084 2.9E-07 48.3 4.2 33 14-46 7-40 (319)
334 3qha_A Putative oxidoreductase 95.8 0.01 3.5E-07 47.4 4.7 34 13-46 15-49 (296)
335 1t2d_A LDH-P, L-lactate dehydr 95.7 0.013 4.5E-07 47.3 5.3 34 13-46 4-39 (322)
336 3hn2_A 2-dehydropantoate 2-red 95.7 0.0094 3.2E-07 48.0 4.3 32 14-45 3-35 (312)
337 3pqe_A L-LDH, L-lactate dehydr 95.7 0.013 4.4E-07 47.4 4.9 36 10-45 2-40 (326)
338 2bcg_G Secretory pathway GDP d 95.6 0.0097 3.3E-07 50.6 4.3 42 12-53 10-52 (453)
339 3doj_A AT3G25530, dehydrogenas 95.6 0.013 4.6E-07 47.1 4.9 36 11-46 19-55 (310)
340 1lld_A L-lactate dehydrogenase 95.6 0.013 4.4E-07 47.3 4.7 33 13-45 7-42 (319)
341 2ew2_A 2-dehydropantoate 2-red 95.6 0.013 4.3E-07 47.1 4.6 32 14-45 4-36 (316)
342 3oj0_A Glutr, glutamyl-tRNA re 95.5 0.0096 3.3E-07 41.9 3.4 33 13-45 21-54 (144)
343 4ffl_A PYLC; amino acid, biosy 95.5 0.015 5E-07 47.9 4.8 34 13-46 1-35 (363)
344 4ezb_A Uncharacterized conserv 95.5 0.009 3.1E-07 48.3 3.4 36 10-45 21-58 (317)
345 2hjr_A Malate dehydrogenase; m 95.4 0.02 6.7E-07 46.5 5.1 33 14-46 15-49 (328)
346 2dpo_A L-gulonate 3-dehydrogen 95.4 0.014 4.7E-07 47.2 4.2 34 13-46 6-40 (319)
347 2raf_A Putative dinucleotide-b 95.4 0.021 7E-07 43.1 4.9 34 13-46 19-53 (209)
348 3ggo_A Prephenate dehydrogenas 95.4 0.021 7.3E-07 46.0 5.2 33 13-45 33-68 (314)
349 1ks9_A KPA reductase;, 2-dehyd 95.4 0.018 6.3E-07 45.6 4.9 32 15-46 2-34 (291)
350 1x13_A NAD(P) transhydrogenase 95.4 0.017 5.8E-07 48.3 4.8 34 13-46 172-206 (401)
351 1l7d_A Nicotinamide nucleotide 95.3 0.021 7.1E-07 47.4 5.2 35 12-46 171-206 (384)
352 1bg6_A N-(1-D-carboxylethyl)-L 95.3 0.018 6.2E-07 47.2 4.8 32 14-45 5-37 (359)
353 3gg2_A Sugar dehydrogenase, UD 95.3 0.018 6.1E-07 48.9 4.8 32 14-45 3-35 (450)
354 2qyt_A 2-dehydropantoate 2-red 95.3 0.012 4.2E-07 47.3 3.7 35 9-43 4-45 (317)
355 3g17_A Similar to 2-dehydropan 95.2 0.013 4.6E-07 46.7 3.7 32 14-45 3-35 (294)
356 2uyy_A N-PAC protein; long-cha 95.2 0.023 7.9E-07 45.8 5.0 34 13-46 30-64 (316)
357 1ur5_A Malate dehydrogenase; o 95.2 0.023 7.9E-07 45.6 5.0 32 14-45 3-36 (309)
358 3abi_A Putative uncharacterize 95.2 0.019 6.6E-07 47.3 4.6 37 9-45 12-48 (365)
359 3g79_A NDP-N-acetyl-D-galactos 95.2 0.021 7.1E-07 48.7 4.8 34 13-46 18-54 (478)
360 2y0c_A BCEC, UDP-glucose dehyd 95.1 0.021 7.2E-07 48.9 4.8 33 13-45 8-41 (478)
361 3ego_A Probable 2-dehydropanto 95.1 0.022 7.7E-07 45.7 4.7 32 14-45 3-34 (307)
362 1b37_A Protein (polyamine oxid 95.1 0.017 5.7E-07 49.4 4.2 40 12-51 3-44 (472)
363 1cjc_A Protein (adrenodoxin re 95.1 0.014 4.9E-07 49.7 3.6 83 129-220 14-106 (460)
364 3ghy_A Ketopantoate reductase 95.1 0.025 8.7E-07 46.0 4.9 31 14-44 4-35 (335)
365 2v6b_A L-LDH, L-lactate dehydr 95.0 0.024 8.1E-07 45.5 4.6 32 14-45 1-35 (304)
366 1zej_A HBD-9, 3-hydroxyacyl-CO 95.0 0.026 9E-07 44.9 4.7 35 12-46 11-45 (293)
367 3vtf_A UDP-glucose 6-dehydroge 95.0 0.028 9.5E-07 47.4 5.1 35 11-45 19-54 (444)
368 3g0o_A 3-hydroxyisobutyrate de 95.0 0.027 9.4E-07 45.1 4.8 34 13-46 7-41 (303)
369 3l9w_A Glutathione-regulated p 95.0 0.019 6.6E-07 48.1 4.0 34 13-46 4-38 (413)
370 3mog_A Probable 3-hydroxybutyr 95.0 0.027 9.3E-07 48.2 4.9 34 13-46 5-39 (483)
371 3c24_A Putative oxidoreductase 95.0 0.033 1.1E-06 44.1 5.2 33 13-45 11-45 (286)
372 1pjc_A Protein (L-alanine dehy 94.9 0.024 8.1E-07 46.7 4.4 33 13-45 167-200 (361)
373 3k6j_A Protein F01G10.3, confi 94.9 0.032 1.1E-06 47.2 5.3 34 13-46 54-88 (460)
374 3ius_A Uncharacterized conserv 94.8 0.029 9.8E-07 44.3 4.5 34 13-46 5-39 (286)
375 3qsg_A NAD-binding phosphogluc 94.8 0.026 9E-07 45.4 4.3 34 12-45 23-58 (312)
376 1guz_A Malate dehydrogenase; o 94.8 0.029 1E-06 45.1 4.6 32 15-46 2-36 (310)
377 3dhn_A NAD-dependent epimerase 94.8 0.026 8.9E-07 42.8 4.1 34 13-46 4-39 (227)
378 2i6t_A Ubiquitin-conjugating e 94.8 0.032 1.1E-06 44.6 4.6 34 13-46 14-50 (303)
379 2a9f_A Putative malic enzyme ( 94.8 0.03 1E-06 46.1 4.4 33 13-45 188-222 (398)
380 1zcj_A Peroxisomal bifunctiona 94.7 0.037 1.3E-06 47.2 5.2 34 13-46 37-71 (463)
381 1vl6_A Malate oxidoreductase; 94.6 0.033 1.1E-06 45.8 4.4 33 12-44 191-225 (388)
382 1lqt_A FPRA; NADP+ derivative, 94.6 0.014 4.7E-07 49.7 2.4 82 129-219 11-107 (456)
383 2eez_A Alanine dehydrogenase; 94.6 0.036 1.2E-06 45.8 4.7 33 13-45 166-199 (369)
384 3gvi_A Malate dehydrogenase; N 94.6 0.044 1.5E-06 44.2 5.1 34 13-46 7-42 (324)
385 3pdu_A 3-hydroxyisobutyrate de 94.6 0.03 1E-06 44.4 4.0 33 14-46 2-35 (287)
386 3pef_A 6-phosphogluconate dehy 94.5 0.039 1.3E-06 43.8 4.6 33 14-46 2-35 (287)
387 4huj_A Uncharacterized protein 94.5 0.022 7.4E-07 43.3 2.9 34 13-46 23-58 (220)
388 2aef_A Calcium-gated potassium 94.5 0.023 8E-07 43.5 3.2 34 12-46 8-42 (234)
389 1gte_A Dihydropyrimidine dehyd 94.5 0.016 5.3E-07 54.6 2.5 84 129-221 195-289 (1025)
390 1dlj_A UDP-glucose dehydrogena 94.5 0.038 1.3E-06 46.2 4.6 31 15-45 2-32 (402)
391 2vhw_A Alanine dehydrogenase; 94.5 0.04 1.4E-06 45.6 4.7 33 13-45 168-201 (377)
392 2q3e_A UDP-glucose 6-dehydroge 94.5 0.037 1.3E-06 47.3 4.6 32 14-45 6-40 (467)
393 4e21_A 6-phosphogluconate dehy 94.5 0.043 1.5E-06 45.1 4.8 34 13-46 22-56 (358)
394 2vns_A Metalloreductase steap3 94.5 0.041 1.4E-06 41.6 4.4 33 13-45 28-61 (215)
395 3dtt_A NADP oxidoreductase; st 94.4 0.044 1.5E-06 42.4 4.6 35 12-46 18-53 (245)
396 1jw9_B Molybdopterin biosynthe 94.4 0.043 1.5E-06 42.6 4.5 33 13-45 31-65 (249)
397 3phh_A Shikimate dehydrogenase 94.3 0.057 1.9E-06 42.3 5.0 34 13-46 118-152 (269)
398 1mv8_A GMD, GDP-mannose 6-dehy 94.3 0.038 1.3E-06 46.7 4.3 31 15-45 2-33 (436)
399 3gpi_A NAD-dependent epimerase 94.3 0.054 1.8E-06 42.7 5.0 33 14-46 4-37 (286)
400 3p7m_A Malate dehydrogenase; p 94.3 0.057 2E-06 43.5 5.1 34 13-46 5-40 (321)
401 2h78_A Hibadh, 3-hydroxyisobut 94.3 0.043 1.5E-06 43.8 4.4 34 13-46 3-37 (302)
402 1hyh_A L-hicdh, L-2-hydroxyiso 94.3 0.045 1.5E-06 43.9 4.5 32 14-45 2-36 (309)
403 4a7p_A UDP-glucose dehydrogena 94.3 0.048 1.6E-06 46.1 4.7 33 14-46 9-42 (446)
404 3cky_A 2-hydroxymethyl glutara 94.2 0.047 1.6E-06 43.5 4.5 33 13-45 4-37 (301)
405 1nyt_A Shikimate 5-dehydrogena 94.2 0.056 1.9E-06 42.5 4.8 33 13-45 119-152 (271)
406 1evy_A Glycerol-3-phosphate de 94.2 0.042 1.4E-06 45.2 4.3 31 15-45 17-48 (366)
407 3e8x_A Putative NAD-dependent 94.2 0.047 1.6E-06 41.7 4.3 35 12-46 20-56 (236)
408 3l6d_A Putative oxidoreductase 94.2 0.063 2.2E-06 43.0 5.1 34 13-46 9-43 (306)
409 1z82_A Glycerol-3-phosphate de 94.2 0.053 1.8E-06 44.0 4.7 33 13-45 14-47 (335)
410 3ldh_A Lactate dehydrogenase; 94.1 0.069 2.4E-06 43.1 5.3 34 12-45 20-56 (330)
411 2pv7_A T-protein [includes: ch 94.1 0.074 2.5E-06 42.4 5.4 34 13-46 21-56 (298)
412 4dll_A 2-hydroxy-3-oxopropiona 94.1 0.056 1.9E-06 43.6 4.7 34 13-46 31-65 (320)
413 1a5z_A L-lactate dehydrogenase 94.1 0.05 1.7E-06 43.9 4.4 32 14-45 1-35 (319)
414 2izz_A Pyrroline-5-carboxylate 94.1 0.055 1.9E-06 43.7 4.6 34 13-46 22-60 (322)
415 2o3j_A UDP-glucose 6-dehydroge 94.0 0.053 1.8E-06 46.5 4.7 33 13-45 9-44 (481)
416 3orq_A N5-carboxyaminoimidazol 94.0 0.068 2.3E-06 44.2 5.2 36 11-46 10-46 (377)
417 3hwr_A 2-dehydropantoate 2-red 94.0 0.058 2E-06 43.5 4.6 32 13-45 19-51 (318)
418 1txg_A Glycerol-3-phosphate de 94.0 0.053 1.8E-06 43.9 4.4 29 15-43 2-31 (335)
419 1pjq_A CYSG, siroheme synthase 94.0 0.046 1.6E-06 46.5 4.1 33 13-45 12-45 (457)
420 1b8p_A Protein (malate dehydro 93.9 0.046 1.6E-06 44.3 3.9 33 12-44 4-45 (329)
421 3dfu_A Uncharacterized protein 93.9 0.023 7.8E-07 43.4 2.0 32 13-44 6-38 (232)
422 1vg0_A RAB proteins geranylger 93.9 0.09 3.1E-06 46.6 5.9 41 12-52 7-48 (650)
423 1oju_A MDH, malate dehydrogena 93.9 0.06 2E-06 42.9 4.3 32 14-45 1-35 (294)
424 3vku_A L-LDH, L-lactate dehydr 93.8 0.073 2.5E-06 43.0 4.9 33 13-45 9-44 (326)
425 2ivd_A PPO, PPOX, protoporphyr 93.8 0.05 1.7E-06 46.4 4.2 40 11-50 14-54 (478)
426 3nep_X Malate dehydrogenase; h 93.8 0.064 2.2E-06 43.1 4.5 33 14-46 1-36 (314)
427 4id9_A Short-chain dehydrogena 93.8 0.058 2E-06 43.8 4.4 35 12-46 18-54 (347)
428 2egg_A AROE, shikimate 5-dehyd 93.8 0.075 2.6E-06 42.4 4.8 33 13-45 141-175 (297)
429 1ldn_A L-lactate dehydrogenase 93.8 0.073 2.5E-06 42.9 4.8 33 13-45 6-41 (316)
430 2b9w_A Putative aminooxidase; 93.8 0.099 3.4E-06 43.8 5.8 40 12-51 5-46 (424)
431 1ez4_A Lactate dehydrogenase; 93.7 0.069 2.4E-06 43.0 4.6 34 12-45 4-40 (318)
432 1yj8_A Glycerol-3-phosphate de 93.7 0.055 1.9E-06 44.7 4.1 33 14-46 22-62 (375)
433 4g65_A TRK system potassium up 93.7 0.076 2.6E-06 45.2 5.0 35 12-46 234-268 (461)
434 1jay_A Coenzyme F420H2:NADP+ o 93.7 0.07 2.4E-06 40.0 4.4 31 15-45 2-34 (212)
435 3d0o_A L-LDH 1, L-lactate dehy 93.7 0.079 2.7E-06 42.7 4.8 33 13-45 6-41 (317)
436 3ew7_A LMO0794 protein; Q8Y8U8 93.7 0.074 2.5E-06 39.9 4.5 31 15-45 2-34 (221)
437 2g5c_A Prephenate dehydrogenas 93.7 0.08 2.7E-06 41.7 4.8 32 14-45 2-36 (281)
438 3q2o_A Phosphoribosylaminoimid 93.7 0.081 2.8E-06 43.9 5.0 35 12-46 13-48 (389)
439 2rir_A Dipicolinate synthase, 93.6 0.076 2.6E-06 42.4 4.6 34 12-45 156-190 (300)
440 4b4o_A Epimerase family protei 93.6 0.072 2.5E-06 42.3 4.5 33 14-46 1-35 (298)
441 3d4o_A Dipicolinate synthase s 93.6 0.078 2.7E-06 42.2 4.6 34 12-45 154-188 (293)
442 1vpd_A Tartronate semialdehyde 93.6 0.069 2.4E-06 42.5 4.3 33 14-46 6-39 (299)
443 4aj2_A L-lactate dehydrogenase 93.6 0.094 3.2E-06 42.4 5.1 34 12-45 18-54 (331)
444 4e4t_A Phosphoribosylaminoimid 93.5 0.1 3.5E-06 43.8 5.5 35 12-46 34-69 (419)
445 3qvo_A NMRA family protein; st 93.5 0.056 1.9E-06 41.3 3.6 34 12-45 22-58 (236)
446 3gvp_A Adenosylhomocysteinase 93.5 0.065 2.2E-06 44.8 4.1 34 12-45 219-253 (435)
447 3fi9_A Malate dehydrogenase; s 93.5 0.099 3.4E-06 42.5 5.1 33 13-45 8-44 (343)
448 3c7a_A Octopine dehydrogenase; 93.5 0.057 2E-06 45.1 3.8 29 14-42 3-33 (404)
449 3ond_A Adenosylhomocysteinase; 93.4 0.1 3.5E-06 44.4 5.2 34 12-45 264-298 (488)
450 3gt0_A Pyrroline-5-carboxylate 93.4 0.1 3.5E-06 40.3 4.9 33 14-46 3-40 (247)
451 3enk_A UDP-glucose 4-epimerase 93.4 0.11 3.8E-06 42.0 5.4 36 11-46 3-40 (341)
452 2f1k_A Prephenate dehydrogenas 93.3 0.092 3.2E-06 41.3 4.6 31 15-45 2-33 (279)
453 4hv4_A UDP-N-acetylmuramate--L 93.3 0.069 2.4E-06 45.9 4.1 36 10-45 19-56 (494)
454 2wtb_A MFP2, fatty acid multif 93.3 0.098 3.3E-06 47.2 5.2 34 13-46 312-346 (725)
455 2r6j_A Eugenol synthase 1; phe 93.3 0.093 3.2E-06 42.0 4.7 35 12-46 10-46 (318)
456 2ahr_A Putative pyrroline carb 93.3 0.1 3.5E-06 40.5 4.8 32 14-45 4-36 (259)
457 2x4g_A Nucleoside-diphosphate- 93.3 0.11 3.6E-06 42.1 5.1 33 14-46 14-48 (342)
458 1p77_A Shikimate 5-dehydrogena 93.2 0.065 2.2E-06 42.1 3.6 33 13-45 119-152 (272)
459 3ce6_A Adenosylhomocysteinase; 93.2 0.11 3.8E-06 44.4 5.1 35 11-45 272-307 (494)
460 2cvz_A Dehydrogenase, 3-hydrox 93.2 0.087 3E-06 41.6 4.3 33 14-46 2-34 (289)
461 1y7t_A Malate dehydrogenase; N 93.2 0.073 2.5E-06 43.1 3.9 33 13-45 4-45 (327)
462 3h2s_A Putative NADH-flavin re 93.1 0.099 3.4E-06 39.4 4.4 31 15-45 2-34 (224)
463 1kjq_A GART 2, phosphoribosylg 93.1 0.11 3.9E-06 43.0 5.1 38 9-46 7-45 (391)
464 3vps_A TUNA, NAD-dependent epi 93.1 0.12 4.2E-06 41.2 5.2 34 13-46 7-42 (321)
465 4gwg_A 6-phosphogluconate dehy 93.1 0.11 3.6E-06 44.5 4.9 34 13-46 4-38 (484)
466 2rcy_A Pyrroline carboxylate r 93.1 0.11 3.7E-06 40.4 4.7 33 14-46 5-42 (262)
467 3don_A Shikimate dehydrogenase 93.1 0.081 2.8E-06 41.7 3.9 34 13-46 117-152 (277)
468 1yqg_A Pyrroline-5-carboxylate 93.1 0.097 3.3E-06 40.7 4.4 31 15-45 2-34 (263)
469 1hdo_A Biliverdin IX beta redu 93.1 0.11 3.8E-06 38.4 4.6 32 14-45 4-37 (206)
470 1gpj_A Glutamyl-tRNA reductase 93.0 0.1 3.6E-06 43.6 4.7 34 12-45 166-201 (404)
471 2p4q_A 6-phosphogluconate dehy 93.0 0.11 3.9E-06 44.6 4.9 34 13-46 10-44 (497)
472 1x0v_A GPD-C, GPDH-C, glycerol 93.0 0.065 2.2E-06 43.8 3.4 33 14-46 9-49 (354)
473 4gx0_A TRKA domain protein; me 93.0 0.097 3.3E-06 45.8 4.6 33 14-46 349-382 (565)
474 2pzm_A Putative nucleotide sug 92.9 0.14 4.7E-06 41.3 5.2 33 13-45 20-54 (330)
475 2gf2_A Hibadh, 3-hydroxyisobut 92.9 0.1 3.5E-06 41.4 4.4 32 15-46 2-34 (296)
476 3c4a_A Probable tryptophan hyd 92.9 0.12 4.1E-06 42.7 4.9 81 129-220 8-143 (381)
477 2hk9_A Shikimate dehydrogenase 92.9 0.11 3.6E-06 41.0 4.4 33 13-45 129-162 (275)
478 1edz_A 5,10-methylenetetrahydr 92.9 0.11 3.9E-06 41.6 4.5 34 12-45 176-211 (320)
479 3ruf_A WBGU; rossmann fold, UD 92.9 0.083 2.9E-06 42.9 3.9 35 12-46 24-60 (351)
480 3jyo_A Quinate/shikimate dehyd 92.8 0.14 4.8E-06 40.4 4.9 34 12-45 126-161 (283)
481 3tri_A Pyrroline-5-carboxylate 92.8 0.15 5E-06 40.3 5.0 33 14-46 4-40 (280)
482 3ktd_A Prephenate dehydrogenas 92.8 0.14 4.9E-06 41.6 5.1 34 13-46 8-42 (341)
483 3tnl_A Shikimate dehydrogenase 92.7 0.13 4.5E-06 41.3 4.7 34 12-45 153-188 (315)
484 1yb4_A Tartronic semialdehyde 92.7 0.076 2.6E-06 42.1 3.4 31 14-45 4-35 (295)
485 1qyc_A Phenylcoumaran benzylic 92.7 0.14 4.9E-06 40.6 5.0 33 13-45 4-38 (308)
486 2zqz_A L-LDH, L-lactate dehydr 92.7 0.14 4.8E-06 41.4 4.9 34 12-45 8-44 (326)
487 3fbt_A Chorismate mutase and s 92.6 0.13 4.3E-06 40.7 4.4 34 12-45 121-156 (282)
488 4gbj_A 6-phosphogluconate dehy 92.5 0.1 3.4E-06 41.6 3.8 34 13-46 5-39 (297)
489 2c5a_A GDP-mannose-3', 5'-epim 92.5 0.14 4.7E-06 42.3 4.8 35 12-46 28-64 (379)
490 3pwz_A Shikimate dehydrogenase 92.5 0.17 5.7E-06 39.8 4.9 34 12-45 119-154 (272)
491 1smk_A Malate dehydrogenase, g 92.5 0.086 2.9E-06 42.7 3.4 34 13-46 8-45 (326)
492 1leh_A Leucine dehydrogenase; 92.5 0.16 5.3E-06 41.7 4.9 34 12-45 172-206 (364)
493 1nvt_A Shikimate 5'-dehydrogen 92.4 0.15 5.2E-06 40.3 4.7 32 13-45 128-160 (287)
494 1mld_A Malate dehydrogenase; o 92.4 0.12 4E-06 41.6 4.1 31 15-45 2-36 (314)
495 2x0j_A Malate dehydrogenase; o 92.4 0.14 4.7E-06 40.7 4.3 32 14-45 1-35 (294)
496 1np3_A Ketol-acid reductoisome 92.4 0.16 5.6E-06 41.2 4.9 33 14-46 17-50 (338)
497 2zyd_A 6-phosphogluconate dehy 92.2 0.15 5E-06 43.7 4.6 34 13-46 15-49 (480)
498 3o8q_A Shikimate 5-dehydrogena 92.2 0.17 5.7E-06 40.0 4.6 34 12-45 125-160 (281)
499 1qyd_A Pinoresinol-lariciresin 92.2 0.18 6E-06 40.2 4.9 33 13-45 4-38 (313)
500 2ydy_A Methionine adenosyltran 92.2 0.15 5.2E-06 40.6 4.5 32 14-45 3-36 (315)
No 1
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1.8e-34 Score=244.68 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=189.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCc--EEEEcCCCCcccccccccc-ccCCcccccccccccccc--cccEEEEe-eee
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSAD--VTLIDPKEYFEITWASLRA-MVEPSFGKRSVINHTDYL--VNGRIVAS-PAI 85 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~--v~vie~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~ 85 (275)
+++|+|||||+||++||.+|+ .|++ |+|||+++..++....+.. ...............+++ .++++..+ ++.
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEE
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEE
Confidence 359999999999999999998 5776 9999999987765443332 111111111112222222 26777766 677
Q ss_pred EeecC--eEEecCCeEEeCCEEEEccCCCCCCCchH------------HHHHHHHhc------------CCcchhhHHHH
Q 023957 86 NITEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTR------------TERLNQYQA------------GGPTGVELAGE 139 (275)
Q Consensus 86 ~~~~~--~v~~~~~~~~~~~~lilatG~~~~~~~~~------------~~~l~~~~~------------~g~~~~~~a~~ 139 (275)
.++.. .+.+.++..+.||++++|||+.|..|.++ .+....+.. +|.+++|+|..
T Consensus 82 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~ 161 (410)
T 3ef6_A 82 ALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATT 161 (410)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHH
T ss_pred EEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHH
Confidence 77654 88888888999999999999886554321 122222221 88999999999
Q ss_pred HhhhCCCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCC
Q 023957 140 IAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 218 (275)
Q Consensus 140 l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 218 (275)
+. ..+.+++++++.+.+++ .+++.+.+.+.+.+++.||++++++.|++++.+++...+.+++|++++||.||+|+|.
T Consensus 162 l~--~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 162 AR--KLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp HH--HTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCE
T ss_pred HH--hCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 98 46899999999988775 4677888999999999999999999999998766556788999999999999999999
Q ss_pred CCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 219 PVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
+|+.++++..++ +.+ +.+.||++++| +.|+|||+|||+..+..
T Consensus 240 ~p~~~l~~~~gl--~~~--~gi~vd~~~~t-~~~~IyA~GD~a~~~~~ 282 (410)
T 3ef6_A 240 EPADQLARQAGL--ACD--RGVIVDHCGAT-LAKGVFAVGDVASWPLR 282 (410)
T ss_dssp EECCHHHHHTTC--CBS--SSEECCTTSBC-SSTTEEECGGGEEEEBT
T ss_pred eecHHHHHhCCC--ccC--CeEEEccCeeE-CCCCEEEEEcceeccCC
Confidence 999988887776 344 45999999998 89999999999988764
No 2
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.5e-34 Score=246.70 Aligned_cols=244 Identities=18% Similarity=0.305 Sum_probs=184.3
Q ss_pred eEEEEcCChHHHHHHHHhh-cC--CcEEEEcCCCCccccccccccccCCccccc-cccc--ccccc--cccEEEE-eeee
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-FS--ADVTLIDPKEYFEITWASLRAMVEPSFGKR-SVIN--HTDYL--VNGRIVA-SPAI 85 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~g--~~v~vie~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~--~~~~~~~-~~~~ 85 (275)
+|+|||||+||++||..|+ .| .+|+|||+++...+....++.......... .... ...++ .++++.. .++.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 6999999999999999997 34 679999999877665444433222111111 1111 11111 2455533 4566
Q ss_pred EeecC--eEEec-----CCeEEeCCEEEEccCCCCCCCchH------------HHHHHHHh-----c------CCcchhh
Q 023957 86 NITEN--EVLTA-----EGRRVVYDYLVIATGHKDPVPKTR------------TERLNQYQ-----A------GGPTGVE 135 (275)
Q Consensus 86 ~~~~~--~v~~~-----~~~~~~~~~lilatG~~~~~~~~~------------~~~l~~~~-----~------~g~~~~~ 135 (275)
.++.. .+... ++..+.||+||+|||+.|..|+++ ...+..+. + +|.+|+|
T Consensus 82 ~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E 161 (437)
T 4eqs_A 82 AINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLE 161 (437)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHH
T ss_pred EEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhh
Confidence 66543 33321 234688999999999987766532 11222221 1 8999999
Q ss_pred HHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEc
Q 023957 136 LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLC 215 (275)
Q Consensus 136 ~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a 215 (275)
+|..+. ..+.+++++++.+.+++.+++++.+.+.+.++++||+++.+++|++++.. .+.+++|+++++|.|++|
T Consensus 162 ~A~~l~--~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~----~v~~~~g~~~~~D~vl~a 235 (437)
T 4eqs_A 162 VLENLY--ERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGN----EITFKSGKVEHYDMIIEG 235 (437)
T ss_dssp HHHHHH--HHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETT----EEEETTSCEEECSEEEEC
T ss_pred hHHHHH--hcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCC----eeeecCCeEEeeeeEEEE
Confidence 999998 56899999999999999999999999999999999999999999998743 478889999999999999
Q ss_pred CCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCCC
Q 023957 216 TGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 267 (275)
Q Consensus 216 ~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~~ 267 (275)
+|.+|+.++++..++ +++++|+|.||+++|| +.|+|||+|||+..|+..
T Consensus 236 ~G~~Pn~~~~~~~gl--~~~~~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~ 284 (437)
T 4eqs_A 236 VGTHPNSKFIESSNI--KLDRKGFIPVNDKFET-NVPNIYAIGDIATSHYRH 284 (437)
T ss_dssp CCEEESCGGGTTSSC--CCCTTSCEECCTTCBC-SSTTEEECGGGEEEEBSS
T ss_pred eceecCcHHHHhhhh--hhccCCcEecCCCccC-CCCCEEEEEEccCccccc
Confidence 999999998877766 6788999999999999 999999999999877653
No 3
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=8.8e-34 Score=245.23 Aligned_cols=254 Identities=25% Similarity=0.324 Sum_probs=182.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccc-ccccc----ccccccEEEEeeee
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRS-VINHT----DYLVNGRIVASPAI 85 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~ 85 (275)
.+.+|||||||+||+++|..|+ .+++|+|||+++++-+.+. +............ ..+.. ....+++++.+++.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~Pl-L~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v~ 119 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPL-LPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEAT 119 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGG-GGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccc-hhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEEEE
Confidence 3468999999999999999998 5899999999987654322 2211111111111 11111 11236788888888
Q ss_pred EeecC--eEEe--------------------cCCeEEeCCEEEEccCCCCCC---CchHH-----------HHH-----H
Q 023957 86 NITEN--EVLT--------------------AEGRRVVYDYLVIATGHKDPV---PKTRT-----------ERL-----N 124 (275)
Q Consensus 86 ~~~~~--~v~~--------------------~~~~~~~~~~lilatG~~~~~---~~~~~-----------~~l-----~ 124 (275)
.++.. ++.+ .++.++.||+||+|||+.|.. |+... ..+ .
T Consensus 120 ~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~ 199 (502)
T 4g6h_A 120 SINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAA 199 (502)
T ss_dssp EEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHH
T ss_pred EEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHH
Confidence 88754 4443 245689999999999998554 43210 001 0
Q ss_pred HHh----------------c-----CCcchhhHHHHHhhhC------------CCCEEEEEeCCCcccCcCCcchHHHHH
Q 023957 125 QYQ----------------A-----GGPTGVELAGEIAVDF------------PEKKVTLVHKGSRLLEFIGPKAGDKTR 171 (275)
Q Consensus 125 ~~~----------------~-----~g~~~~~~a~~l~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~ 171 (275)
.+. . +|++|+|+|..+.... ...++++++..+.+++.+++.+.+.+.
T Consensus 200 ~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~ 279 (502)
T 4g6h_A 200 NLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQ 279 (502)
T ss_dssp HHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHH
T ss_pred HHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHH
Confidence 000 0 8899999998876421 236899999999999999999999999
Q ss_pred HHHHhCCCEEEcCceeeeecCCCCCceEEcCCCc----EEeecEEEEcCCCCCCchhhccc--ccccccCCCCceEeCCC
Q 023957 172 DWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD----TINADCHFLCTGKPVGSDWLKDT--ILKDSLDTHGMLMVDEN 245 (275)
Q Consensus 172 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~----~~~~d~vv~a~G~~~~~~~~~~~--~~~~~~~~~g~i~v~~~ 245 (275)
+.|+++||++++++.|++++.+.........||+ +++||.||+|+|.+|++ ++... .++...+.+|+|.||++
T Consensus 280 ~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~-~~~~l~~~~~~~~~~~g~I~Vd~~ 358 (502)
T 4g6h_A 280 SHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARP-VITDLFKKIPEQNSSKRGLAVNDF 358 (502)
T ss_dssp HHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCH-HHHHHHHHSGGGTTCCSSEEBCTT
T ss_pred HHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCH-HHHhHHHhccccccCCCceeECCc
Confidence 9999999999999999999855433345566764 69999999999999874 22221 22335677899999999
Q ss_pred ccccCCCCeEEeccccCCCCCC
Q 023957 246 LRVKGQKNIFAIGDITDIRVSA 267 (275)
Q Consensus 246 ~~~~~~~~v~a~Gd~~~~~~~~ 267 (275)
+|++++|+|||+|||+..|.++
T Consensus 359 lq~~~~~~IfAiGD~a~~~~p~ 380 (502)
T 4g6h_A 359 LQVKGSNNIFAIGDNAFAGLPP 380 (502)
T ss_dssp SBBTTCSSEEECGGGEESSSCC
T ss_pred cccCCCCCEEEEEcccCCCCCC
Confidence 9998999999999999887654
No 4
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=7.6e-35 Score=252.19 Aligned_cols=253 Identities=22% Similarity=0.232 Sum_probs=187.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh--cCCcEEEEc--------CCCCcccccccc---cc---------------ccCCcc-
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ--FSADVTLID--------PKEYFEITWASL---RA---------------MVEPSF- 62 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~--~g~~v~vie--------~~~~~~~~~~~~---~~---------------~~~~~~- 62 (275)
.++||+|||||++|+++|++|+ .|++|+||| +...+|+.+... +. .....+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 3589999999999999999996 499999999 344555433210 00 000000
Q ss_pred --------ccccccc------------cccc--cc-ccEEEEeeeeEeecCeEEec---C-----CeEEeCCEEEEccCC
Q 023957 63 --------GKRSVIN------------HTDY--LV-NGRIVASPAINITENEVLTA---E-----GRRVVYDYLVIATGH 111 (275)
Q Consensus 63 --------~~~~~~~------------~~~~--~~-~~~~~~~~~~~~~~~~v~~~---~-----~~~~~~~~lilatG~ 111 (275)
....+.. .... .. +++++.+.+..++.+++.+. + +..+.||++|+|||+
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 0000000 0000 12 67788887777777777775 4 668999999999999
Q ss_pred CCCCCchHH-------HHHHHHhc---------CCcchhhHHHHHhhhCC-CCEEEEEeCCCcccCcCCcchHHHHHHHH
Q 023957 112 KDPVPKTRT-------ERLNQYQA---------GGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTRDWL 174 (275)
Q Consensus 112 ~~~~~~~~~-------~~l~~~~~---------~g~~~~~~a~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (275)
.|..|.++. +.+..+.. +|.+++|+|..+....+ +.+++++++.+.+++.+++++.+.+.+.+
T Consensus 166 ~p~~p~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l 245 (495)
T 2wpf_A 166 WPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQL 245 (495)
T ss_dssp EECCCCCTTGGGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHH
T ss_pred CcCCCCCCCccccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHH
Confidence 876654321 11111111 88999999999985433 89999999999988888899999999999
Q ss_pred HhCCCEEEcCceeeeecCCCC-CceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCC
Q 023957 175 ISKKVDVKLGERVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKN 253 (275)
Q Consensus 175 ~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~ 253 (275)
++.||++++++.|.+++.+++ ...+.+.+|+++++|.||+|+|.+|+.+++.....+++++++|+|.||+++|| +.|+
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~ 324 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPN 324 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTT
T ss_pred HhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCcc-CCCC
Confidence 999999999999999986543 46788889989999999999999999875432333447778899999999998 8999
Q ss_pred eEEeccccCCCC
Q 023957 254 IFAIGDITDIRV 265 (275)
Q Consensus 254 v~a~Gd~~~~~~ 265 (275)
|||+|||+..+.
T Consensus 325 IyA~GD~~~~~~ 336 (495)
T 2wpf_A 325 IYAIGDITDRLM 336 (495)
T ss_dssp EEECGGGGCSCC
T ss_pred EEEEeccCCCcc
Confidence 999999997543
No 5
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.1e-34 Score=249.48 Aligned_cols=249 Identities=22% Similarity=0.290 Sum_probs=186.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---c--------------------cccCC--ccccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---R--------------------AMVEP--SFGKR 65 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~--------------------~~~~~--~~~~~ 65 (275)
.++||+|||||++|+++|.+|+ .|++|+|||++. +|+.|... + ++... .....
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 4689999999999999999998 699999999984 44433210 0 00000 00000
Q ss_pred cccc------------cccc--ccccEEEEeeeeEeecCeEEecCCeEEeCCEEEEccCCCCCCCchH-------HHHHH
Q 023957 66 SVIN------------HTDY--LVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTR-------TERLN 124 (275)
Q Consensus 66 ~~~~------------~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~lilatG~~~~~~~~~-------~~~l~ 124 (275)
.+.. +... ..+++++.+.+..++.+.+.+ ++..+.||++|+|||+.|..|+++ .+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~ 160 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPIVPRLPGAELGITSDGFF 160 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEECCCSCTTGGGSBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCCCCCCCCccceecHHHHh
Confidence 0000 0000 125777777777777777777 677899999999999986665432 12222
Q ss_pred HHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCC
Q 023957 125 QYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEG 195 (275)
Q Consensus 125 ~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~ 195 (275)
.+.. +|.+|+|+|..+. ..+.+++++++.+.+++.+++.+.+.+.+.+++.|++++.+++|++++.+++
T Consensus 161 ~~~~~~~~vvVvGgG~~g~e~A~~l~--~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~ 238 (463)
T 2r9z_A 161 ALQQQPKRVAIIGAGYIGIELAGLLR--SFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQ 238 (463)
T ss_dssp HCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETT
T ss_pred hhhccCCEEEEECCCHHHHHHHHHHH--hcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 2221 8899999999998 4589999999999888888888999999999999999999999999987655
Q ss_pred CceEEcCCCc-EEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 196 SDTYLTSTGD-TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 196 ~~~v~~~~g~-~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
...+.+.+|+ ++++|.||+|+|.+|+.+++.....+++++++|+|.||++++| +.|+|||+|||+..+.
T Consensus 239 ~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~ 308 (463)
T 2r9z_A 239 GTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGRDQ 308 (463)
T ss_dssp EEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTSCC
T ss_pred eEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCCcc
Confidence 5678888998 8999999999999998875432233446778899999999998 8999999999987554
No 6
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=8e-35 Score=250.55 Aligned_cols=251 Identities=20% Similarity=0.209 Sum_probs=188.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---c---------------cccC-------Ccccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---R---------------AMVE-------PSFGK 64 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~---------------~~~~-------~~~~~ 64 (275)
..++||+|||||++|+++|+.|+ .|++|+|||+ ..+|+.+... + .... ..+..
T Consensus 3 ~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (463)
T 4dna_A 3 AFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDW 81 (463)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECH
T ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCH
Confidence 34689999999999999999998 6999999999 4455432110 0 0000 00000
Q ss_pred cccc--------c----ccccc--cccEEEEeeeeEeecCeEEe-cCCeEEeCCEEEEccCCCCC-CCchHH-------H
Q 023957 65 RSVI--------N----HTDYL--VNGRIVASPAINITENEVLT-AEGRRVVYDYLVIATGHKDP-VPKTRT-------E 121 (275)
Q Consensus 65 ~~~~--------~----~~~~~--~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~lilatG~~~~-~~~~~~-------~ 121 (275)
.... . ...++ .+++++.+.+..++...+.+ .++..+.||++++|||+.|. .|.++. +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~ 161 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSN 161 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGGCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCccccccHH
Confidence 0000 0 00011 25677777777777777777 56788999999999999877 665431 1
Q ss_pred HHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecC
Q 023957 122 RLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSV 192 (275)
Q Consensus 122 ~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 192 (275)
.+..+.. +|.+++|+|..+. ..+.+++++.+.+.+++.+++++.+.+.+.+++.|++++.++.|++++.
T Consensus 162 ~~~~~~~~~~~v~ViGgG~~g~e~A~~l~--~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~ 239 (463)
T 4dna_A 162 EAFDLPALPESILIAGGGYIAVEFANIFH--GLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSA 239 (463)
T ss_dssp HHTTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE
T ss_pred HHhhhhcCCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEE
Confidence 2212211 7889999999998 4688999999999988888999999999999999999999999999987
Q ss_pred CCCC-ceEE-cCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 193 SEGS-DTYL-TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 193 ~~~~-~~v~-~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
+++. ..+. +.+|+ +++|.||+|+|++|+..++.....+++++++|++.||++++| +.|+|||+|||+..+..
T Consensus 240 ~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~ 313 (463)
T 4dna_A 240 DADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDRVQL 313 (463)
T ss_dssp CTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSSCCC
T ss_pred cCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCCCCCC
Confidence 6544 5788 88898 999999999999999887433334457788999999999998 89999999999986554
No 7
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.2e-34 Score=248.50 Aligned_cols=249 Identities=19% Similarity=0.254 Sum_probs=185.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---c-----------cccC---Ccc---------cc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---R-----------AMVE---PSF---------GK 64 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~-----------~~~~---~~~---------~~ 64 (275)
.++||+|||||++|+++|++|+ .|++|+|||++. +|+.+... + .... ..+ ..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~ 81 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW 81 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 3589999999999999999998 699999999984 44432210 0 0000 000 00
Q ss_pred ccccc------------cccc--ccccEEEEeeeeEeecCeEEecCCeEEeCCEEEEccCCCCCCCchH-------HHHH
Q 023957 65 RSVIN------------HTDY--LVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTR-------TERL 123 (275)
Q Consensus 65 ~~~~~------------~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~lilatG~~~~~~~~~-------~~~l 123 (275)
..+.. .... ..+++++.+.+..++.+.+.+ ++..+.||++++|||+.|..|.++ .+.+
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~g~~~~~~~~~~ 160 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGRPSHPDIPGVEYGIDSDGF 160 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEEECCCCSTTGGGSBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCCCCCCCCCCccceecHHHh
Confidence 00000 0000 125777877777777777777 677899999999999986665432 1222
Q ss_pred HHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCC
Q 023957 124 NQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSE 194 (275)
Q Consensus 124 ~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~ 194 (275)
..+.. +|.+|+|+|..+. ..+.+++++++.+.+++.+++.+.+.+.+.+++.|++++++++|++++.++
T Consensus 161 ~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~ 238 (450)
T 1ges_A 161 FALPALPERVAVVGAGYIGVELGGVIN--GLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNT 238 (450)
T ss_dssp HHCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECT
T ss_pred hhhhhcCCeEEEECCCHHHHHHHHHHH--hcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC
Confidence 22221 8899999999998 458999999999988888888899999999999999999999999998654
Q ss_pred CC-ceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 195 GS-DTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 195 ~~-~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
+. ..+.+.+|+++++|.||+|+|.+|+.+++.....+++++++|++.||++++| +.|+|||+|||+..+.
T Consensus 239 ~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~ 309 (450)
T 1ges_A 239 DGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTGAVE 309 (450)
T ss_dssp TSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGTSCC
T ss_pred CcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCCCCc
Confidence 43 6788889989999999999999999875422223446778899999999998 8999999999997654
No 8
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.7e-33 Score=237.95 Aligned_cols=248 Identities=21% Similarity=0.213 Sum_probs=189.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCc--EEEEcCCCCccccccccc-cccCCcc-cccccccccccc--cccEEEEe-e
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSAD--VTLIDPKEYFEITWASLR-AMVEPSF-GKRSVINHTDYL--VNGRIVAS-P 83 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~--v~vie~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~-~ 83 (275)
+++||+|||||++|++||++|+ .|++ |+|||+++..++....+. ....... .........+++ .++++... +
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 87 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCE
Confidence 4589999999999999999998 5776 999999998776544333 2222111 111111122222 25666665 6
Q ss_pred eeEeecC--eEEecCCeEEeCCEEEEccCCCCCCCchH---------------HHHHHHH----hc------CCcchhhH
Q 023957 84 AINITEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTR---------------TERLNQY----QA------GGPTGVEL 136 (275)
Q Consensus 84 ~~~~~~~--~v~~~~~~~~~~~~lilatG~~~~~~~~~---------------~~~l~~~----~~------~g~~~~~~ 136 (275)
+..++.. .+.+.++..+.||++++|||+.|..|.++ ...+... .+ +|.+++|+
T Consensus 88 v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~ 167 (415)
T 3lxd_A 88 VVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEA 167 (415)
T ss_dssp EEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHH
T ss_pred EEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHH
Confidence 6677654 78888888999999999999886655321 1122221 11 78899999
Q ss_pred HHHHhhhCCCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEcCCCcEEeecEEEE
Q 023957 137 AGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFL 214 (275)
Q Consensus 137 a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~ 214 (275)
|..+. ..+.+++++++.+.+++ ..++.+.+.+.+.+++.|+++++++.|++++.+++.+ .+.+.+|++++||.||+
T Consensus 168 A~~l~--~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~ 245 (415)
T 3lxd_A 168 AAVLT--KFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIV 245 (415)
T ss_dssp HHHHH--HTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEE
T ss_pred HHHHH--hcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEE
Confidence 99998 56899999999998876 4678889999999999999999999999998765554 58889999999999999
Q ss_pred cCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 215 CTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 215 a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
|+|.+|+.+++...++ ..+ +| +.||++++| +.|+|||+|||+..+..
T Consensus 246 a~G~~p~~~l~~~~gl--~~~-~g-i~vd~~~~t-~~~~iyA~GD~a~~~~~ 292 (415)
T 3lxd_A 246 GIGIVPCVGALISAGA--SGG-NG-VDVDEFCRT-SLTDVYAIGDCAAHAND 292 (415)
T ss_dssp CSCCEESCHHHHHTTC--CCS-SS-EECCTTCBC-SSTTEEECGGGEEEECG
T ss_pred CCCCccChHHHHhCCC--CcC-CC-EEECCCCCc-CCCCEEEEEeeeeecCc
Confidence 9999999988877766 333 44 999999999 89999999999988763
No 9
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=5.1e-34 Score=244.83 Aligned_cols=245 Identities=19% Similarity=0.198 Sum_probs=179.4
Q ss_pred CeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCccccccccccccCCccc--ccccccccccc--cccEEE-Eeeee
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTDYL--VNGRIV-ASPAI 85 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~-~~~~~ 85 (275)
+||+|||||++|++||++|+ . |++|+|||+++.+++....+......... ........+++ .++++. ..++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 69999999999999999997 4 89999999999888655433332222111 11111111111 144443 34555
Q ss_pred EeecC--eEEe---cCCeEEeCCEEEEccCCCCCCCchHH---------------HHHHH---Hhc------CCcchhhH
Q 023957 86 NITEN--EVLT---AEGRRVVYDYLVIATGHKDPVPKTRT---------------ERLNQ---YQA------GGPTGVEL 136 (275)
Q Consensus 86 ~~~~~--~v~~---~~~~~~~~~~lilatG~~~~~~~~~~---------------~~l~~---~~~------~g~~~~~~ 136 (275)
.++.. .+.. .++..+.||++++|||+.|..|.++. ..+.. ..+ +|.+++|+
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~ 162 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEA 162 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHH
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHH
Confidence 55543 4433 24567899999999999976654321 11111 111 88999999
Q ss_pred HHHHhhhCCCCEEEEEeCCCcccCc-CCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEc
Q 023957 137 AGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLC 215 (275)
Q Consensus 137 a~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a 215 (275)
|..+. ..+.+++++.+.+.+++. +++++.+.+.+.+++.|+++++++.|++++..++.+.+.+++| ++++|.||+|
T Consensus 163 A~~l~--~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 163 IDFLV--KMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFA 239 (452)
T ss_dssp HHHHH--HTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEEC
T ss_pred HHHHH--hCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEEC
Confidence 99998 568999999999998874 7889999999999999999999999999986555666777777 7999999999
Q ss_pred CCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 216 TGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 216 ~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
+|.+|+.+++... +.++++|++.||+++|| +.|+|||+|||+..+.
T Consensus 240 ~G~~p~~~~l~~~---~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~ 285 (452)
T 3oc4_A 240 LNLHPQLAYLDKK---IQRNLDQTIAVDAYLQT-SVPNVFAIGDCISVMN 285 (452)
T ss_dssp SCCBCCCSSCCTT---SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEE
T ss_pred cCCCCChHHHHhh---hccCCCCCEEECcCccC-CCCCEEEEEeeEEecc
Confidence 9999998887543 46788999999999999 8999999999998763
No 10
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1e-33 Score=244.33 Aligned_cols=249 Identities=26% Similarity=0.331 Sum_probs=175.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCccccccccccccCCccc--ccc------cccccccc---cccE
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFG--KRS------VINHTDYL---VNGR 78 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~---~~~~ 78 (275)
++||+|||||++|+++|+.|+ . |++|+|||+++.+++....++........ ... .....+++ .+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 469999999999999999997 4 89999999999876544333322211111 011 11111111 2445
Q ss_pred EE-EeeeeEeecC--eEEecC---Ce--EEeCCEEEEccCCCCCCCchH------------HHHHHHHh--------c--
Q 023957 79 IV-ASPAINITEN--EVLTAE---GR--RVVYDYLVIATGHKDPVPKTR------------TERLNQYQ--------A-- 128 (275)
Q Consensus 79 ~~-~~~~~~~~~~--~v~~~~---~~--~~~~~~lilatG~~~~~~~~~------------~~~l~~~~--------~-- 128 (275)
+. ..++..++.. .+.+.+ +. .+.||++++|||+.|..|.++ ......+. +
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v 162 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKA 162 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEE
T ss_pred EEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEE
Confidence 43 3555566543 454433 54 789999999999886544321 12222222 1
Q ss_pred ----CCcchhhHHHHHhhhCC-CCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcC
Q 023957 129 ----GGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTS 202 (275)
Q Consensus 129 ----~g~~~~~~a~~l~~~~~-~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~ 202 (275)
+|.+++|+|..+. .. +.+++++.+.+.+++ .+++.+.+.+.+.+++.|++++.+++|++++.+++.+.+.+.
T Consensus 163 vViGgG~~g~e~A~~l~--~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~ 240 (472)
T 3iwa_A 163 VIVGGGFIGLEMAVSLA--DMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVIT 240 (472)
T ss_dssp EEECCSHHHHHHHHHHH--HHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE
T ss_pred EEECCCHHHHHHHHHHH--HhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEe
Confidence 8889999999998 44 889999999998888 888899999999999999999999999999876666678888
Q ss_pred CCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 203 TGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 203 ~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
+|+++++|.||+|+|++|+..++...++ +++++|++.||++++| +.|+|||+|||+..+..
T Consensus 241 ~g~~i~aD~Vv~a~G~~p~~~l~~~~gl--~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~ 301 (472)
T 3iwa_A 241 DKRTLDADLVILAAGVSPNTQLARDAGL--ELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNL 301 (472)
T ss_dssp SSCEEECSEEEECSCEEECCHHHHHHTC--CBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBT
T ss_pred CCCEEEcCEEEECCCCCcCHHHHHhCCc--cCCCCCCEEECCCccc-CCCCEEEeccceecccc
Confidence 8989999999999999999888765554 6788899999999998 89999999999976554
No 11
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=4e-33 Score=236.03 Aligned_cols=246 Identities=21% Similarity=0.285 Sum_probs=186.7
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCCccccccccc-cccCCcc-cccccccccccc--cccEEEEeeeeE
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEYFEITWASLR-AMVEPSF-GKRSVINHTDYL--VNGRIVASPAIN 86 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~ 86 (275)
+||+|||||++|++||++|+ .|+ +|+|||+++...+....+. ....... .........+++ .++++...++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~~ 81 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISDRMVS 81 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEECCCEEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEEEEEEE
Confidence 68999999999999999998 577 8999999997766533333 1221111 111111112222 256666666777
Q ss_pred eecC--eEEecCCeEEeCCEEEEccCCCCCCCchH------------HHH---HHHHh-c--------CCcchhhHHHHH
Q 023957 87 ITEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTR------------TER---LNQYQ-A--------GGPTGVELAGEI 140 (275)
Q Consensus 87 ~~~~--~v~~~~~~~~~~~~lilatG~~~~~~~~~------------~~~---l~~~~-~--------~g~~~~~~a~~l 140 (275)
++.. .+.+.++..+.||++++|||+.|..|.++ .+. +.... . +|.+++|+|..+
T Consensus 82 id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l 161 (404)
T 3fg2_P 82 IDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATA 161 (404)
T ss_dssp EETTTTEEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHH
T ss_pred EECCCCEEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHH
Confidence 7644 78888888999999999999875544321 111 22211 1 788999999999
Q ss_pred hhhCCCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEcCCCcEEeecEEEEcCCC
Q 023957 141 AVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGK 218 (275)
Q Consensus 141 ~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~ 218 (275)
. ..+.+++++++.+.+++ ..++.+.+.+.+.+++.|+++++++.|++++.+++.+ .+.+.+|++++||.||+|+|.
T Consensus 162 ~--~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 162 R--AKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp H--HTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred H--hCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 8 46899999999988776 4677889999999999999999999999998765444 588899999999999999999
Q ss_pred CCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 219 PVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
+|+.++++..++ ..+ +| +.||++++| +.|+|||+|||+..+..
T Consensus 240 ~p~~~l~~~~gl--~~~-~G-i~vd~~~~t-~~~~iya~GD~a~~~~~ 282 (404)
T 3fg2_P 240 IPNVEIAAAAGL--PTA-AG-IIVDQQLLT-SDPHISAIGDCALFESV 282 (404)
T ss_dssp EECCHHHHHTTC--CBS-SS-EEECTTSBC-SSTTEEECGGGEEEEET
T ss_pred ccCHHHHHhCCC--CCC-CC-EEECCCccc-CCCCEEEeecceeecCc
Confidence 999988887776 333 45 999999998 89999999999987764
No 12
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=4.3e-35 Score=253.45 Aligned_cols=251 Identities=22% Similarity=0.265 Sum_probs=188.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccc---------------------cc-cC---Cccccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR---------------------AM-VE---PSFGKR 65 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~---------------------~~-~~---~~~~~~ 65 (275)
.++||+|||||++|+++|++|+ .|++|+|||+. .+|+.+.... .+ .. ..+...
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 103 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWE 103 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 3589999999999999999998 69999999994 4443321100 00 00 000000
Q ss_pred ccc--------c----cccc--ccccEEEEeeeeEeecCeEEec-CCeEEeCCEEEEccCCCCC-CCchHHH-------H
Q 023957 66 SVI--------N----HTDY--LVNGRIVASPAINITENEVLTA-EGRRVVYDYLVIATGHKDP-VPKTRTE-------R 122 (275)
Q Consensus 66 ~~~--------~----~~~~--~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~lilatG~~~~-~~~~~~~-------~ 122 (275)
... . .... ..+++++.+.+..++...+.+. ++..+.||++++|||+.|. .|.++.. .
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~ 183 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDLCLTSNE 183 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGGSBCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccccccHHH
Confidence 000 0 0001 1256778888888888877776 6778999999999998877 5543211 1
Q ss_pred HHHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCC
Q 023957 123 LNQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS 193 (275)
Q Consensus 123 l~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 193 (275)
+..+. + +|.+++++|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.|++++.++.|++++.+
T Consensus 184 ~~~~~~~~~~v~ViGgG~~g~e~A~~l~--~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~ 261 (484)
T 3o0h_A 184 IFDLEKLPKSIVIVGGGYIGVEFANIFH--GLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQST 261 (484)
T ss_dssp GGGCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEEC
T ss_pred HHhHHhcCCcEEEECcCHHHHHHHHHHH--HcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEee
Confidence 11111 1 7888999999998 46889999999999888888999999999999999999999999999887
Q ss_pred CCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 194 EGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 194 ~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
++.+.+.+.+|+++++|.||+|+|.+|+..++.....+++++++|++.||++++| +.|+|||+|||+..+..
T Consensus 262 ~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~ 333 (484)
T 3o0h_A 262 ENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGHIQL 333 (484)
T ss_dssp SSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTSCCC
T ss_pred CCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCCCcC
Confidence 7777888899989999999999999999887443334457788999999999998 89999999999986543
No 13
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=9e-35 Score=251.64 Aligned_cols=254 Identities=18% Similarity=0.182 Sum_probs=189.6
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccc------------------cccccCCc-------c
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS------------------LRAMVEPS-------F 62 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~------------------~~~~~~~~-------~ 62 (275)
|+..++||+|||||++|++||..|+ .|++|+|||+++ +|+.+.. ........ .
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~ 82 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISV 82 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEE
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCcc
Confidence 3334589999999999999999998 699999999986 4432110 00000000 0
Q ss_pred cccccccc---------------cccccccEEEEeeeeEeecCeEEecCCeEEeCCEEEEccCCCCCCCchHH-------
Q 023957 63 GKRSVINH---------------TDYLVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRT------- 120 (275)
Q Consensus 63 ~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~lilatG~~~~~~~~~~------- 120 (275)
....+... ........++.+.....+.+++.+.++..+.||++|+|||+.|..|+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~~~~v~ 162 (492)
T 3ic9_A 83 NGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLL 162 (492)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECCCCHHHHTTGGGEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCccCCcEE
Confidence 00000000 00011334566666667777888888889999999999999999887431
Q ss_pred --HHHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeee
Q 023957 121 --ERLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNL 189 (275)
Q Consensus 121 --~~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~ 189 (275)
+.+..+.. +|.+|+|+|..+. ..+.+++++.+.+.+++.+++++.+.+.+.+++. +++++++.|++
T Consensus 163 t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~ 239 (492)
T 3ic9_A 163 TNDNLFELNDLPKSVAVFGPGVIGLELGQALS--RLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVIS 239 (492)
T ss_dssp CHHHHTTCSSCCSEEEEESSCHHHHHHHHHHH--HTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEE
T ss_pred cHHHHhhhhhcCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEE
Confidence 11111111 8899999999998 5689999999999988888899999999999988 99999999999
Q ss_pred ecCCCCCceEEcC--CC--cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeC-CCccccCCCCeEEeccccCCC
Q 023957 190 DSVSEGSDTYLTS--TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVD-ENLRVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 190 i~~~~~~~~v~~~--~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~-~~~~~~~~~~v~a~Gd~~~~~ 264 (275)
++.+++.+.+.+. +| +++++|.||+|+|++|+..++.....+++++++|++.|| ++++| +.|+|||+|||+..+
T Consensus 240 i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~~ 318 (492)
T 3ic9_A 240 TIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNTL 318 (492)
T ss_dssp EEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTSS
T ss_pred EEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCCCC
Confidence 9877767667664 67 689999999999999999885444445578889999999 89998 899999999999876
Q ss_pred CCC
Q 023957 265 VSA 267 (275)
Q Consensus 265 ~~~ 267 (275)
...
T Consensus 319 ~~~ 321 (492)
T 3ic9_A 319 TLL 321 (492)
T ss_dssp CSH
T ss_pred ccH
Confidence 543
No 14
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=3.2e-34 Score=249.95 Aligned_cols=250 Identities=19% Similarity=0.261 Sum_probs=189.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---ccc--------------------cCCcccc--
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---RAM--------------------VEPSFGK-- 64 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~~~--------------------~~~~~~~-- 64 (275)
..++||+|||||++|+++|++|+ .|++|+|||+++.+|+.+... +.. .......
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 34689999999999999999998 699999999998666433210 000 0000000
Q ss_pred --ccccc-----cc---ccc-------cccEEE-EeeeeEeecCeEEecCCeEEeCCEEEEccCCCCCCCchH-------
Q 023957 65 --RSVIN-----HT---DYL-------VNGRIV-ASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTR------- 119 (275)
Q Consensus 65 --~~~~~-----~~---~~~-------~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~lilatG~~~~~~~~~------- 119 (275)
+.... .. .++ .+++++ ...+..++...+.+. +..+.||++++|||+.|..|.++
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~~p~i~G~~~~~v 199 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPGTLDVPGVNAKGV 199 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECCCCCSTTTTSBTE
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCCCCCCCCcccCcE
Confidence 00000 01 111 256666 677777777777775 77899999999999987665422
Q ss_pred --HHHHH-HH---h-c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCce
Q 023957 120 --TERLN-QY---Q-A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 186 (275)
Q Consensus 120 --~~~l~-~~---~-~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~ 186 (275)
...+. .+ . + +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.|++++++++
T Consensus 200 ~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~--~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~ 277 (523)
T 1mo9_A 200 FDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFN--ATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSN 277 (523)
T ss_dssp EEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCE
T ss_pred eeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCE
Confidence 12222 22 2 2 7889999999998 5688999999999988888889999999999999999999999
Q ss_pred eeeecCCCCC----ceEEcCCCc-EEeecEEEEcCCCCCCch-hhcccccccccCCCCceEeCCCccccCCCCeEEeccc
Q 023957 187 VNLDSVSEGS----DTYLTSTGD-TINADCHFLCTGKPVGSD-WLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDI 260 (275)
Q Consensus 187 v~~i~~~~~~----~~v~~~~g~-~~~~d~vv~a~G~~~~~~-~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~ 260 (275)
|++++.+++. +.+.+.+|+ ++++|.||+|+|.+|+.+ +++..++ +++++|+|.||++++| +.|+|||+|||
T Consensus 278 V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl--~~~~~G~i~Vd~~~~t-~~~~IyA~GD~ 354 (523)
T 1mo9_A 278 VTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGL--DLGPKGEVLVNEYLQT-SVPNVYAVGDL 354 (523)
T ss_dssp EEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTC--CBCTTSCBCCCTTSBC-SSTTEEECGGG
T ss_pred EEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCC--ccCCCCCEEECCCCcc-CCCCEEEEeec
Confidence 9999865444 567788887 899999999999999988 6766655 6778899999999998 89999999999
Q ss_pred cCCCCC
Q 023957 261 TDIRVS 266 (275)
Q Consensus 261 ~~~~~~ 266 (275)
+..|..
T Consensus 355 ~~~~~~ 360 (523)
T 1mo9_A 355 IGGPME 360 (523)
T ss_dssp GCSSCS
T ss_pred CCCccc
Confidence 987643
No 15
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-34 Score=245.68 Aligned_cols=248 Identities=18% Similarity=0.212 Sum_probs=183.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---c-----------ccc----CCccc---------
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---R-----------AMV----EPSFG--------- 63 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~-----------~~~----~~~~~--------- 63 (275)
.++||+|||||++|+++|+.|+ .|++|+|||++. +|+.|... + ... ...+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 3589999999999999999998 699999999985 44433210 0 000 00000
Q ss_pred ----cccccc------------cccc--ccccEEEEeeeeEeecC--eEEecCCe--EEeCCEEEEccCCCCCCC-chH-
Q 023957 64 ----KRSVIN------------HTDY--LVNGRIVASPAINITEN--EVLTAEGR--RVVYDYLVIATGHKDPVP-KTR- 119 (275)
Q Consensus 64 ----~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~--~v~~~~~~--~~~~~~lilatG~~~~~~-~~~- 119 (275)
...... .... ..+++++.+.+..++.. .+.+.++. .+.||++++|||+.|..| .++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~g 168 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPG 168 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTSTT
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCC
Confidence 000000 0001 12567777776666655 34445665 789999999999987666 332
Q ss_pred ------HHHHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcC
Q 023957 120 ------TERLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLG 184 (275)
Q Consensus 120 ------~~~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~ 184 (275)
.+.+..+.. +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.||+++++
T Consensus 169 ~~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~ 246 (479)
T 2hqm_A 169 FELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFH--GLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKL 246 (479)
T ss_dssp GGGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred cccccchHHHhcccccCCeEEEECCCHHHHHHHHHHH--HcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeC
Confidence 122222221 8899999999998 46899999999999888888999999999999999999999
Q ss_pred ceeeeecCCCCC--ceEEcCCC-cEEeecEEEEcCCCCCCchh-hcccccccccCCCCceEeCCCccccCCCCeEEeccc
Q 023957 185 ERVNLDSVSEGS--DTYLTSTG-DTINADCHFLCTGKPVGSDW-LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDI 260 (275)
Q Consensus 185 ~~v~~i~~~~~~--~~v~~~~g-~~~~~d~vv~a~G~~~~~~~-~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~ 260 (275)
++|++++.+++. ..+.+.+| +++++|.||+|+|.+|+..+ ++..++ +++++|+|.||++++| +.|+|||+|||
T Consensus 247 ~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~ 323 (479)
T 2hqm_A 247 SKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGI--KLNSHDQIIADEYQNT-NVPNIYSLGDV 323 (479)
T ss_dssp CCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTC--CBCTTSCBCCCTTCBC-SSTTEEECGGG
T ss_pred CEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCc--eECCCCCEeECCCCcc-CCCCEEEEEec
Confidence 999999865443 66888888 78999999999999998855 455444 6778899999999998 89999999999
Q ss_pred cCCCC
Q 023957 261 TDIRV 265 (275)
Q Consensus 261 ~~~~~ 265 (275)
+..+.
T Consensus 324 ~~~~~ 328 (479)
T 2hqm_A 324 VGKVE 328 (479)
T ss_dssp TTSSC
T ss_pred CCCcc
Confidence 87654
No 16
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=2.5e-33 Score=241.57 Aligned_cols=249 Identities=22% Similarity=0.263 Sum_probs=183.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---------------------ccc--cCC---cccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---------------------RAM--VEP---SFGK 64 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---------------------~~~--~~~---~~~~ 64 (275)
.++||+|||||++|+++|++|+ .|++|+|||++ .+|+.|... +.. +.. ....
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 4689999999999999999998 69999999998 455332210 000 000 0000
Q ss_pred cccc-------------cccccc---cccEEEEeeeeEeecC--eEEecCC--eEEeCCEEEEccCCCCCCCchH-----
Q 023957 65 RSVI-------------NHTDYL---VNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDPVPKTR----- 119 (275)
Q Consensus 65 ~~~~-------------~~~~~~---~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~lilatG~~~~~~~~~----- 119 (275)
..+. .+.+++ .+++++.+.+..++.. .+.+.++ ..+.||++|+|||+.|..|.++
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~ 161 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKES 161 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTTTS
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCCcC
Confidence 0000 011111 2677777777777766 4455566 6799999999999986655432
Q ss_pred ----HHHHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCce
Q 023957 120 ----TERLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 186 (275)
Q Consensus 120 ----~~~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~ 186 (275)
...+..+.. +|.+|+|+|..+. ..+.+++++++.+.+++ +++.+.+.+.+.+++.|++++.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~ 238 (467)
T 1zk7_A 162 PYWTSTEALASDTIPERLAVIGSSVVALELAQAFA--RLGSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQ 238 (467)
T ss_dssp CCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCC
T ss_pred ceecHHHHhcccccCCEEEEECCCHHHHHHHHHHH--HcCCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCE
Confidence 122222211 8899999999998 56899999999998888 8888999999999999999999999
Q ss_pred eeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 187 VNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 187 v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
|++++.+++...+.++ +.++++|.||+|+|.+|+.+++.....+++++++|++.||++++| +.|+|||+|||+..|..
T Consensus 239 v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~ 316 (467)
T 1zk7_A 239 ASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQPQF 316 (467)
T ss_dssp EEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSSCCC
T ss_pred EEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCCccc
Confidence 9999876555556665 457999999999999998876432334446777899999999998 89999999999987653
No 17
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.1e-32 Score=233.37 Aligned_cols=243 Identities=23% Similarity=0.293 Sum_probs=183.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCCcccccccccc-ccCCcccccccccccccccccEEEEee-eeE
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEYFEITWASLRA-MVEPSFGKRSVINHTDYLVNGRIVASP-AIN 86 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 86 (275)
+++||+|||||++|+++|..|+ .|. +|+|||+++..++....+.. ................ ..+++++.+. +..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~v~~ 84 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKR-APEVEWLLGVTAQS 84 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTT-SCSCEEEETCCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHH-HCCCEEEcCCEEEE
Confidence 4589999999999999999998 576 59999999876654322221 1111111111111100 1256776664 667
Q ss_pred eec--CeEEecCCeEEeCCEEEEccCCCCCCCch-H-----------HHHHHHHh------c------CCcchhhHHHHH
Q 023957 87 ITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKT-R-----------TERLNQYQ------A------GGPTGVELAGEI 140 (275)
Q Consensus 87 ~~~--~~v~~~~~~~~~~~~lilatG~~~~~~~~-~-----------~~~l~~~~------~------~g~~~~~~a~~l 140 (275)
++. +++.+.++..+.||++++|||+.|..|++ + .+....+. + +|.+|+|+|..+
T Consensus 85 i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l 164 (408)
T 2gqw_A 85 FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATA 164 (408)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHH
T ss_pred EECCCCEEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHH
Confidence 764 47888888889999999999998765543 1 22222222 1 888999999999
Q ss_pred hhhCCCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCC
Q 023957 141 AVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 141 ~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
. ..+.+++++++.+.+++ .+++++.+.+.+.+++.||+++.++.|++++ + + .+++.+|++++||.||+|+|.+
T Consensus 165 ~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 165 R--TAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp H--HTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCEE
T ss_pred H--hCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCCC
Confidence 8 46889999999998876 4788889999999999999999999999998 3 2 6778899999999999999999
Q ss_pred CCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 220 VGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
|+.++++..++ +++ +| +.||++++| +.|+|||+|||+..+..
T Consensus 239 p~~~l~~~~gl--~~~-~g-i~Vd~~~~t-~~~~IyA~GD~~~~~~~ 280 (408)
T 2gqw_A 239 ANDALARAAGL--ACD-DG-IFVDAYGRT-TCPDVYALGDVTRQRNP 280 (408)
T ss_dssp ECCHHHHHHTC--CBS-SS-EECCTTCBC-SSTTEEECGGGEEEEET
T ss_pred ccHHHHHhCCC--CCC-CC-EEECCCCcc-CCCCEEEEEEEEEecCc
Confidence 99888877665 444 45 999999998 89999999999987753
No 18
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=5.3e-34 Score=245.81 Aligned_cols=250 Identities=16% Similarity=0.177 Sum_probs=183.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccccc-----------------------ccC----Ccccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA-----------------------MVE----PSFGK 64 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~-----------------------~~~----~~~~~ 64 (275)
++||+|||||++|+++|++|+ .|++|+|||+++.+|+.+..... .+. .....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 589999999999999999998 69999999999877654321100 000 00000
Q ss_pred cccccc------------cccc--cccEEEEeeeeEeecC--eEEecCC--eEEeCCEEEEccCCCCCCCchH-------
Q 023957 65 RSVINH------------TDYL--VNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDPVPKTR------- 119 (275)
Q Consensus 65 ~~~~~~------------~~~~--~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~lilatG~~~~~~~~~------- 119 (275)
.....+ .+++ .+++++.+....++.. .+.+.++ ..+.||++|+|||+.|..|+..
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v 161 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVV 161 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCce
Confidence 000000 1111 2567777776666665 4445566 6899999999999886655321
Q ss_pred --HHHHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHH-HhCCCEEEcCcee
Q 023957 120 --TERLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWL-ISKKVDVKLGERV 187 (275)
Q Consensus 120 --~~~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~i~~~~~v 187 (275)
...+..+.. +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+ ++.|++++++++|
T Consensus 162 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v 239 (468)
T 2qae_A 162 LSSTGALALPRVPKTMVVIGGGVIGLELGSVWA--RLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKV 239 (468)
T ss_dssp ECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEE
T ss_pred echHHHhhcccCCceEEEECCCHHHHHHHHHHH--HhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 122222211 7899999999998 5689999999999988888889999999999 9999999999999
Q ss_pred eeecCCCCCceEEcC--CC--cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccC-
Q 023957 188 NLDSVSEGSDTYLTS--TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITD- 262 (275)
Q Consensus 188 ~~i~~~~~~~~v~~~--~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~- 262 (275)
++++.+++.+.+.+. +| +++++|.||+|+|.+|+.+++.....+++++++|+|.||+++|| +.|+|||+|||+.
T Consensus 240 ~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~ 318 (468)
T 2qae_A 240 VGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDK 318 (468)
T ss_dssp EEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSS
T ss_pred EEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCCC
Confidence 999876655666654 66 67999999999999999887432223346777899999999998 8999999999998
Q ss_pred CCC
Q 023957 263 IRV 265 (275)
Q Consensus 263 ~~~ 265 (275)
.+.
T Consensus 319 ~~~ 321 (468)
T 2qae_A 319 GPM 321 (468)
T ss_dssp SCS
T ss_pred CCc
Confidence 444
No 19
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=6.3e-33 Score=244.57 Aligned_cols=248 Identities=19% Similarity=0.317 Sum_probs=185.4
Q ss_pred CeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCccccccccccccCCccc--ccccccccccc---cccEEE-Eeee
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTDYL---VNGRIV-ASPA 84 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~-~~~~ 84 (275)
+||+|||||+||++||++|+ . +++|+|||+++..++....++........ ........+.+ .++++. ..++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 69999999999999999997 3 89999999999887655444332222111 11111111111 245553 4556
Q ss_pred eEeecC--eEEecC---C--eEEeCCEEEEccCCCCCCCchH------------HHHHHHHh--------c------CCc
Q 023957 85 INITEN--EVLTAE---G--RRVVYDYLVIATGHKDPVPKTR------------TERLNQYQ--------A------GGP 131 (275)
Q Consensus 85 ~~~~~~--~v~~~~---~--~~~~~~~lilatG~~~~~~~~~------------~~~l~~~~--------~------~g~ 131 (275)
..++.. .+.+.+ + ..+.||++++|||+.|..|.++ ......+. + +|.
T Consensus 82 ~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ 161 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGF 161 (565)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSH
T ss_pred EEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCH
Confidence 666543 444432 3 3789999999999885544321 11111111 1 889
Q ss_pred chhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecC-------------------
Q 023957 132 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSV------------------- 192 (275)
Q Consensus 132 ~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~------------------- 192 (275)
+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.|+++++++.|++++.
T Consensus 162 ~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 239 (565)
T 3ntd_A 162 IGLEMMESLH--HLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQH 239 (565)
T ss_dssp HHHHHHHHHH--HTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCC
T ss_pred HHHHHHHHHH--hcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccccccccccccccc
Confidence 9999999998 4689999999999988888888999999999999999999999999976
Q ss_pred CCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 193 SEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 193 ~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
.++.+.+.+.+|++++||.||+|+|.+|+..++...++ +++++|++.||++++| +.|+|||+|||+..+..
T Consensus 240 ~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 310 (565)
T 3ntd_A 240 IKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGL--AIGELGGIKVNAMMQT-SDPAIYAVGDAVEEQDF 310 (565)
T ss_dssp TTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTC--CBCTTSSBCCCTTCBC-SSTTEEECGGGBCEEBT
T ss_pred CCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCc--ccCCCCCEEECCCccc-CCCCEEEeeeeEeeccc
Confidence 34455677788989999999999999999888766554 6788899999999998 89999999999976553
No 20
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=4e-34 Score=247.45 Aligned_cols=252 Identities=18% Similarity=0.187 Sum_probs=185.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh--cCCcEEEEc--------CCCCcccccccc---cc---------------ccCC----
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ--FSADVTLID--------PKEYFEITWASL---RA---------------MVEP---- 60 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~--~g~~v~vie--------~~~~~~~~~~~~---~~---------------~~~~---- 60 (275)
++||+|||||++|+++|++|+ .|++|+||| +...+|+.+... +. ....
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 589999999999999999996 499999999 244455432110 00 0000
Q ss_pred -----ccccccccc------------cccc--cc-ccEEEEeeeeEeecCeEEec-----CC---eEEeCCEEEEccCCC
Q 023957 61 -----SFGKRSVIN------------HTDY--LV-NGRIVASPAINITENEVLTA-----EG---RRVVYDYLVIATGHK 112 (275)
Q Consensus 61 -----~~~~~~~~~------------~~~~--~~-~~~~~~~~~~~~~~~~v~~~-----~~---~~~~~~~lilatG~~ 112 (275)
.+....+.. .... .. +++++.+.+..++.+.+... ++ ..+.||++++|||+.
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~ 162 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSW 162 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCCC
Confidence 000000000 0001 12 67888888778887766663 56 689999999999998
Q ss_pred CCCCchHH-------HHHHHHhc---------CCcchhhHHHHHhhhCC-CCEEEEEeCCCcccCcCCcchHHHHHHHHH
Q 023957 113 DPVPKTRT-------ERLNQYQA---------GGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTRDWLI 175 (275)
Q Consensus 113 ~~~~~~~~-------~~l~~~~~---------~g~~~~~~a~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (275)
|..|.++. +.+..+.. +|.+++|+|..+....+ +.+++++++.+.+++.+++++.+.+.+.++
T Consensus 163 p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~ 242 (490)
T 1fec_A 163 PQHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLR 242 (490)
T ss_dssp ECCCCSBTGGGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCccceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHH
Confidence 76654321 11111111 88999999999985322 889999999999888888899999999999
Q ss_pred hCCCEEEcCceeeeecCCCC-CceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCe
Q 023957 176 SKKVDVKLGERVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNI 254 (275)
Q Consensus 176 ~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v 254 (275)
+.||++++++.|++++.+++ ...+.+.+|+++++|.||+|+|.+|+.+++.....+++++++|+|.||++++| +.|+|
T Consensus 243 ~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~I 321 (490)
T 1fec_A 243 ANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDNI 321 (490)
T ss_dssp HTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTE
T ss_pred hCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCcc-CCCCE
Confidence 99999999999999986653 46788888988999999999999999875422233447778899999999998 89999
Q ss_pred EEeccccCCCC
Q 023957 255 FAIGDITDIRV 265 (275)
Q Consensus 255 ~a~Gd~~~~~~ 265 (275)
||+|||+..+.
T Consensus 322 yA~GD~~~~~~ 332 (490)
T 1fec_A 322 YAIGDVTDRVM 332 (490)
T ss_dssp EECGGGGCSCC
T ss_pred EEEeccCCCcc
Confidence 99999997543
No 21
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=8.9e-33 Score=237.18 Aligned_cols=245 Identities=21% Similarity=0.323 Sum_probs=180.1
Q ss_pred CeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCccccccccccccCCcc----cccccccccccc--cccEEEE-ee
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSF----GKRSVINHTDYL--VNGRIVA-SP 83 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~-~~ 83 (275)
+||+|||||++|+++|..|+ . |.+|+|||+++..++....+........ .........+++ .++++.. ..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 58999999999999999997 4 9999999999876654332221111110 111111111111 2456643 34
Q ss_pred eeEee--cCeEEecC-----CeEEeCCEEEEccCCCCCCCchH---------------HHHHHHHhc---------CCcc
Q 023957 84 AINIT--ENEVLTAE-----GRRVVYDYLVIATGHKDPVPKTR---------------TERLNQYQA---------GGPT 132 (275)
Q Consensus 84 ~~~~~--~~~v~~~~-----~~~~~~~~lilatG~~~~~~~~~---------------~~~l~~~~~---------~g~~ 132 (275)
+..++ .+.+.+.+ +..+.||++++|||+.|..|.++ ...+..... +|.+
T Consensus 81 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~ 160 (452)
T 2cdu_A 81 VTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYI 160 (452)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHH
T ss_pred EEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHH
Confidence 55565 34555532 46799999999999886654321 111211111 8899
Q ss_pred hhhHHHHHhhhCCCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCce-EEcCCCcEEeec
Q 023957 133 GVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINAD 210 (275)
Q Consensus 133 ~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d 210 (275)
|+|+|..+. ..+.+++++++.+.+++ .+++++.+.+.+.+++.|++++++++|++++.+++.+. +.+ +|+++++|
T Consensus 161 g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D 237 (452)
T 2cdu_A 161 GAELAEAYS--NQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSD 237 (452)
T ss_dssp HHHHHHHHH--TTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEES
T ss_pred HHHHHHHHH--hcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECC
Confidence 999999998 56899999999998887 68888999999999999999999999999986444443 444 78889999
Q ss_pred EEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 211 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 211 ~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
.||+|+|.+|+.++++.. + +++++|+|.||+++|| +.|+|||+|||+..+.
T Consensus 238 ~vv~a~G~~p~~~ll~~~-l--~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~ 288 (452)
T 2cdu_A 238 IAILCIGFRPNTELLKGK-V--AMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHY 288 (452)
T ss_dssp EEEECCCEEECCGGGTTT-S--CBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEE
T ss_pred EEEECcCCCCCHHHHHHh-h--hcCCCCCEEECCCcCc-CCCCEEEcceEEEecc
Confidence 999999999998887654 3 6778899999999999 8999999999998654
No 22
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-34 Score=250.81 Aligned_cols=250 Identities=20% Similarity=0.193 Sum_probs=185.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c---CCcEEEEcCCCCcccccccc---c---------------cccCCcc--------
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASL---R---------------AMVEPSF-------- 62 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~---g~~v~vie~~~~~~~~~~~~---~---------------~~~~~~~-------- 62 (275)
++||+|||||++|+++|++|+ . |++|+|||+++ +|+.+... + ......+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 489999999999999999997 5 99999999998 55432110 0 0000000
Q ss_pred -ccccccc------------ccccc--cccEEEEeeeeEeec------C--eEEecCCe--EEeCCEEEEccCCCCCCCc
Q 023957 63 -GKRSVIN------------HTDYL--VNGRIVASPAINITE------N--EVLTAEGR--RVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 63 -~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~------~--~v~~~~~~--~~~~~~lilatG~~~~~~~ 117 (275)
....... ..+++ .+++++.+.+..++. . .+...++. .+.||++++|||+.|..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~ 160 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILP 160 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCC
Confidence 0000000 01111 256777777666665 3 34445565 7899999999999877665
Q ss_pred hHH---------HHHHHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCC
Q 023957 118 TRT---------ERLNQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV 179 (275)
Q Consensus 118 ~~~---------~~l~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 179 (275)
++. ..+..+. + +|.+++|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.|+
T Consensus 161 i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV 238 (499)
T 1xdi_A 161 SAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYT--ELGVPVTVVASQDHVLPYEDADAALVLEESFAERGV 238 (499)
T ss_dssp GGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHH--HTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCC
Confidence 321 0111110 1 7889999999998 568899999999998888888999999999999999
Q ss_pred EEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEecc
Q 023957 180 DVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGD 259 (275)
Q Consensus 180 ~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd 259 (275)
+++++++|++++.+++.+.+.+.+|+++++|.||+|+|.+|+.+++.....+++++++|+|.||+++|| +.|+|||+||
T Consensus 239 ~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD 317 (499)
T 1xdi_A 239 RLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGD 317 (499)
T ss_dssp EEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSG
T ss_pred EEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCccc-CCCCEEEEec
Confidence 999999999998766667777888889999999999999999888432333446778899999999998 8999999999
Q ss_pred ccCCCCC
Q 023957 260 ITDIRVS 266 (275)
Q Consensus 260 ~~~~~~~ 266 (275)
|+..+..
T Consensus 318 ~~~~~~l 324 (499)
T 1xdi_A 318 CTGLLPL 324 (499)
T ss_dssp GGTSCSC
T ss_pred cCCCccc
Confidence 9987653
No 23
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=9.1e-33 Score=236.95 Aligned_cols=247 Identities=23% Similarity=0.351 Sum_probs=179.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCccccccccccccCCcc-cccccccccccc---cccEEEEe-ee
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSF-GKRSVINHTDYL---VNGRIVAS-PA 84 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~-~~ 84 (275)
++||+|||||++|+++|+.|+ . +++|+|||+++.+++....++....... .........+.+ .++++... ++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 479999999999999999997 3 8899999999987654433332221111 111111111111 25666655 56
Q ss_pred eEeecC--eEEecCC-eEEeCCEEEEccCCCCCCCchH---------------HHHHHHHh------c-----CCcchhh
Q 023957 85 INITEN--EVLTAEG-RRVVYDYLVIATGHKDPVPKTR---------------TERLNQYQ------A-----GGPTGVE 135 (275)
Q Consensus 85 ~~~~~~--~v~~~~~-~~~~~~~lilatG~~~~~~~~~---------------~~~l~~~~------~-----~g~~~~~ 135 (275)
..++.. .+.+.++ ..+.||++++|||+.|..|.++ ...+.... . +|.+|+|
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E 162 (449)
T 3kd9_A 83 IEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIE 162 (449)
T ss_dssp EEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHH
T ss_pred EEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHH
Confidence 666654 5666666 4799999999999886544321 11222222 1 8889999
Q ss_pred HHHHHhhhCCCCEEEEEeCCCcccCc-CCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEE
Q 023957 136 LAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFL 214 (275)
Q Consensus 136 ~a~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~ 214 (275)
+|..+. ..+.+++++.+.+.+++. +++++.+.+.+.+++. ++++.++.|.+++.++ .+.....+++++++|.||+
T Consensus 163 ~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~ 238 (449)
T 3kd9_A 163 MAEAFA--AQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVIL 238 (449)
T ss_dssp HHHHHH--HTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEE
T ss_pred HHHHHH--hCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEE
Confidence 999998 568999999999998876 8889999999999988 9999999999998655 3433455778899999999
Q ss_pred cCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 215 CTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 215 a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
|+|.+|+.++++..++ +++++|++.||++++| +.|+|||+|||+..++.
T Consensus 239 a~G~~p~~~l~~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 287 (449)
T 3kd9_A 239 ATGIKPNIELAKQLGV--RIGETGAIWTNEKMQT-SVENVYAAGDVAETRHV 287 (449)
T ss_dssp CSCEEECCHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBCEEBT
T ss_pred eeCCccCHHHHHhCCc--cCCCCCCEEECCCCcc-CCCCEEEeeeeeeeccc
Confidence 9999999888776655 6778899999999999 89999999999976654
No 24
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.1e-33 Score=230.90 Aligned_cols=238 Identities=25% Similarity=0.365 Sum_probs=177.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCccccccc-ccccccc--cccEEEEe-eeeEe
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSV-INHTDYL--VNGRIVAS-PAINI 87 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~-~~~~~ 87 (275)
..||+|||||+||++||..|+ .| +|+|||+++..++....+............. ....+++ .+++++.+ .+..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~i 86 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLI 86 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEE
Confidence 369999999999999999998 58 9999999987654333332222111111111 1112222 25666665 46667
Q ss_pred ecC--eEEecCCeEEeCCEEEEccCCCCCCCchH----------HHHHHHH-----h-c------CCcchhhHHHHHhhh
Q 023957 88 TEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTR----------TERLNQY-----Q-A------GGPTGVELAGEIAVD 143 (275)
Q Consensus 88 ~~~--~v~~~~~~~~~~~~lilatG~~~~~~~~~----------~~~l~~~-----~-~------~g~~~~~~a~~l~~~ 143 (275)
+.. .+. .++.++.||++|+|||+.|..|+++ .+.+..+ . + +|.+|+|+|..+.
T Consensus 87 d~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~-- 163 (367)
T 1xhc_A 87 DRGRKVVI-TEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLA-- 163 (367)
T ss_dssp ETTTTEEE-ESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHH--
T ss_pred ECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHH--
Confidence 644 565 5677899999999999986654321 1222221 1 1 8999999999998
Q ss_pred CCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCch
Q 023957 144 FPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 223 (275)
Q Consensus 144 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 223 (275)
..+.+++++++.+.+++ +++++.+.+.+.+++.||+++++++|++++. ..+.+++|+ +++|.||+|+|.+|+.+
T Consensus 164 ~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~----~~v~~~~g~-i~~D~vi~a~G~~p~~~ 237 (367)
T 1xhc_A 164 EAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANE----EGVLTNSGF-IEGKVKICAIGIVPNVD 237 (367)
T ss_dssp HTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS----SEEEETTEE-EECSCEEEECCEEECCH
T ss_pred hCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe----eEEEECCCE-EEcCEEEECcCCCcCHH
Confidence 46899999999998888 8888999999999999999999999999972 247778888 99999999999999988
Q ss_pred hhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 224 WLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 224 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
+++..++ +.+ +| +.||++++| +.|+|||+|||+..+.
T Consensus 238 ll~~~gl--~~~-~g-i~Vd~~~~t-~~~~IyA~GD~a~~~~ 274 (367)
T 1xhc_A 238 LARRSGI--HTG-RG-ILIDDNFRT-SAKDVYAIGDCAEYSG 274 (367)
T ss_dssp HHHHTTC--CBS-SS-EECCTTSBC-SSTTEEECGGGEEBTT
T ss_pred HHHhCCC--CCC-CC-EEECCCccc-CCCCEEEeEeeeecCC
Confidence 8777665 443 44 999999998 8999999999987643
No 25
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=3.5e-33 Score=227.85 Aligned_cols=239 Identities=16% Similarity=0.190 Sum_probs=164.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCc-ccc-cc---cccccccccccEEEEeeee
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPS-FGK-RS---VINHTDYLVNGRIVASPAI 85 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~ 85 (275)
++|||+||||||||++||++|+ .|++|+|||++...|......+++.... ... .. .......+..+.+....+.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVV 84 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEE
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEE
Confidence 4599999999999999999997 6999999999875543222222111110 000 00 0011111224455555554
Q ss_pred Eeec-----CeEEecCCeEEeCCEEEEccCCCCCCCchHHHHH------------HHHh--c-------CC-cchhhHHH
Q 023957 86 NITE-----NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL------------NQYQ--A-------GG-PTGVELAG 138 (275)
Q Consensus 86 ~~~~-----~~v~~~~~~~~~~~~lilatG~~~~~~~~~~~~l------------~~~~--~-------~g-~~~~~~a~ 138 (275)
.+.. .++.+.++..+.||+||+|||+.|..|+++.... ..+. . +| ..+.+.|.
T Consensus 85 ~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~ 164 (304)
T 4fk1_A 85 MITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTK 164 (304)
T ss_dssp EEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHH
T ss_pred EeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHH
Confidence 4432 2678888899999999999999876665432111 0000 0 44 34677777
Q ss_pred HHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCC-ceEEcCCCcEEeecEEEEcCC
Q 023957 139 EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTG 217 (275)
Q Consensus 139 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G 217 (275)
.+. ..+.+++++.+.+. +.+.+.+.+++.|++++.++ +..+..+++. ..+.+.+|+++++|.+|+++|
T Consensus 165 ~~~--~~~~~v~i~~~~~~--------~~~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g 233 (304)
T 4fk1_A 165 LVY--NWSTDLVIATNGNE--------LSQTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLRIERAGGFIVPT 233 (304)
T ss_dssp HHT--TTCSCEEEECSSCC--------CCHHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCEECCCEEEECCE
T ss_pred HHH--hCCceEEEEecccc--------chhhhhhhhhccceeEeeee-EEEeecCCCeeeeeeccccceeeecceeeeec
Confidence 777 56888998877654 34556677888999998765 6666655443 458889999999999999988
Q ss_pred CCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCC
Q 023957 218 KPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~ 264 (275)
.+|+..++...++ +++++|+|.||+++|| |.|+|||+|||++.+
T Consensus 234 ~~~~~~~~~~~g~--~~~~~G~I~vd~~~~T-s~p~IyA~GDv~~~~ 277 (304)
T 4fk1_A 234 FFRPNQFIEQLGC--ELQSNGTFVIDDFGRT-SEKNIYLAGETTTQG 277 (304)
T ss_dssp EECSSCHHHHTTC--CCCTTSSSCSSTTCBC-SSTTEEECSHHHHTS
T ss_pred cccCChhhhhcCe--EECCCCCEEECcCCcc-CCCCEEEEeccCCCc
Confidence 7776677766655 7788999999999999 999999999999754
No 26
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=3.8e-34 Score=246.23 Aligned_cols=249 Identities=18% Similarity=0.200 Sum_probs=185.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---c--------------------cccC-Cccccccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---R--------------------AMVE-PSFGKRSV 67 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~--------------------~~~~-~~~~~~~~ 67 (275)
++||+|||||++|+++|..|+ .|++|+|||+++ +|+.|... + +... .......+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 489999999999999999998 699999999987 44332110 0 0000 00000000
Q ss_pred cc------------ccccc--cccEEEEeeeeEeecCeEEecCCeEEeCCEEEEccCCCCCCCc-hH-------HHHHHH
Q 023957 68 IN------------HTDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPK-TR-------TERLNQ 125 (275)
Q Consensus 68 ~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~lilatG~~~~~~~-~~-------~~~l~~ 125 (275)
.. ...++ .+++++.+....++.+++.+. +..+.||++|+|||+.|..|+ ++ ...+..
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~~~v~~~~~~~~ 163 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG-GERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALK 163 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TEEEEEEEEEECCCEEECCBTTBCCSSSEECHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCCCcEEcHHHHHh
Confidence 00 00111 257777777766777777776 678999999999999877654 21 122211
Q ss_pred Hh----c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCC
Q 023957 126 YQ----A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEG 195 (275)
Q Consensus 126 ~~----~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~ 195 (275)
+. + +|.+|+|+|..+. ..+.+++++++.+.+++..++++.+.+.+.+++.||+++.+++|++++.+++
T Consensus 164 l~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~ 241 (464)
T 2eq6_A 164 VEEGLPKRLLVIGGGAVGLELGQVYR--RLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKD 241 (464)
T ss_dssp GGGCCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT
T ss_pred hhhhcCCEEEEECCCHHHHHHHHHHH--HCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCC
Confidence 21 1 7899999999998 4589999999999888888888999999999999999999999999987665
Q ss_pred CceEEcC-C--Cc--EEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 196 SDTYLTS-T--GD--TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 196 ~~~v~~~-~--g~--~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
.+.+.+. + |+ ++++|.||+|+|.+|+.+++.....++.++++|++.||++++| +.|+|||+|||+..+..
T Consensus 242 ~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~l 316 (464)
T 2eq6_A 242 GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARPPLL 316 (464)
T ss_dssp EEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCSSCC
T ss_pred EEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCCCccc
Confidence 5666665 6 76 8999999999999999876422223446677899999999998 89999999999986553
No 27
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.6e-34 Score=248.25 Aligned_cols=252 Identities=20% Similarity=0.261 Sum_probs=183.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccccc-------------------ccCCccc-------c
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA-------------------MVEPSFG-------K 64 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~-------------------~~~~~~~-------~ 64 (275)
+++||+|||||++|++||+.|+ .|++|+|||+++.+|+.|..... ....... .
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 3589999999999999999998 69999999998887754321100 0000000 0
Q ss_pred cccccc------------ccc--ccccEEEEeeeeEeecC--eEEecCC--eEEeCCEEEEccCCCCC-CCchH------
Q 023957 65 RSVINH------------TDY--LVNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDP-VPKTR------ 119 (275)
Q Consensus 65 ~~~~~~------------~~~--~~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~lilatG~~~~-~~~~~------ 119 (275)
...... ... ..+++++.+....++.. .+...++ ..+.||++|+|||+.|. +|+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~~~~~ 183 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEK 183 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCcccccCCe
Confidence 000000 000 12567777777776665 4444555 57899999999998753 33321
Q ss_pred ----HHHHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCce
Q 023957 120 ----TERLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 186 (275)
Q Consensus 120 ----~~~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~ 186 (275)
......+.. +|.+++|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.||+++.+++
T Consensus 184 ~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~ 261 (491)
T 3urh_A 184 TIVSSTGALALEKVPASMIVVGGGVIGLELGSVWA--RLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAK 261 (491)
T ss_dssp SEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHH--HHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEE
T ss_pred eEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHH--HcCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCe
Confidence 111111111 8899999999998 4588999999999998888899999999999999999999999
Q ss_pred eeeecCCCCCceEEcCC---C--cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEecccc
Q 023957 187 VNLDSVSEGSDTYLTST---G--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 261 (275)
Q Consensus 187 v~~i~~~~~~~~v~~~~---g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~ 261 (275)
|.+++.+++...+.+.+ | +++++|.||+|+|++|+.+++.....+++++++|++.||++++| +.|+|||+|||+
T Consensus 262 v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 340 (491)
T 3urh_A 262 VTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVV 340 (491)
T ss_dssp EEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGS
T ss_pred EEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecC
Confidence 99998776666666542 5 58999999999999999887533334457788999999999998 899999999999
Q ss_pred CCCCC
Q 023957 262 DIRVS 266 (275)
Q Consensus 262 ~~~~~ 266 (275)
..|..
T Consensus 341 ~~~~~ 345 (491)
T 3urh_A 341 RGPML 345 (491)
T ss_dssp SSCCC
T ss_pred CCccc
Confidence 76643
No 28
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.3e-32 Score=234.43 Aligned_cols=248 Identities=22% Similarity=0.316 Sum_probs=183.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCCcccccccccc-ccCCccc-ccccccccccc--cccEEEEe-e
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEYFEITWASLRA-MVEPSFG-KRSVINHTDYL--VNGRIVAS-P 83 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~--~~~~~~~~-~ 83 (275)
+.+||+|||||++|+++|..|+ .|. +|+|||+++...+....+.. ....... ........+++ .+++++.+ .
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 82 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQ 82 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCE
Confidence 3589999999999999999998 576 79999998876543322221 1111100 11111111122 25566554 4
Q ss_pred eeEeec--CeEEecCCeEEeCCEEEEccCCCCCCCchHH---HH------------HHHHh------c------CCcchh
Q 023957 84 AINITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTRT---ER------------LNQYQ------A------GGPTGV 134 (275)
Q Consensus 84 ~~~~~~--~~v~~~~~~~~~~~~lilatG~~~~~~~~~~---~~------------l~~~~------~------~g~~~~ 134 (275)
+..++. +.+.+.++..+.||++|+|||+.|..|+++. .. ...+. + +|.+|+
T Consensus 83 v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~ 162 (431)
T 1q1r_A 83 VTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGL 162 (431)
T ss_dssp EEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHH
T ss_pred EEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHH
Confidence 456654 4788888888999999999999877665321 11 11111 1 888999
Q ss_pred hHHHHHhhhCCCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCceeeeecC--CCCCc-eEEcCCCcEEeec
Q 023957 135 ELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSV--SEGSD-TYLTSTGDTINAD 210 (275)
Q Consensus 135 ~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~--~~~~~-~v~~~~g~~~~~d 210 (275)
|+|..+. ..+.+++++++.+.+++ ..++.+.+.+.+.+++.|+++++++.|++++. +++.+ .+.+.+|+++++|
T Consensus 163 E~A~~l~--~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D 240 (431)
T 1q1r_A 163 EVAATAI--KANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPAD 240 (431)
T ss_dssp HHHHHHH--HTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECS
T ss_pred HHHHHHH--hCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcC
Confidence 9999998 56889999999988776 47778888999999999999999999999986 44444 5788899999999
Q ss_pred EEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 211 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 211 ~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
.||+|+|.+|+.++++..++ +++ +| +.||++++| +.|+|||+|||+..+.+
T Consensus 241 ~Vv~a~G~~p~~~l~~~~gl--~~~-~g-i~Vd~~~~t-s~~~IyA~GD~~~~~~~ 291 (431)
T 1q1r_A 241 LVIAGIGLIPNCELASAAGL--QVD-NG-IVINEHMQT-SDPLIMAVGDCARFHSQ 291 (431)
T ss_dssp EEEECCCEEECCHHHHHTTC--CBS-SS-EECCTTSBC-SSTTEEECGGGEEEEET
T ss_pred EEEECCCCCcCcchhhccCC--CCC-CC-EEECCCccc-CCCCEEEEEeEEEEccc
Confidence 99999999999888877766 443 44 999999998 89999999999987654
No 29
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=2.6e-34 Score=248.51 Aligned_cols=252 Identities=13% Similarity=0.152 Sum_probs=183.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---cc---------------cc--CC-----ccccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---RA---------------MV--EP-----SFGKR 65 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~~---------------~~--~~-----~~~~~ 65 (275)
.++||+|||||++|+++|+.|+ .|++|+|||+++.+|+.+... +. .. .. .....
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDID 84 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 3589999999999999999998 699999999977766332110 00 00 00 00000
Q ss_pred ccccc------------cccc--cccEEEEeeeeEeecCeEEe--cCC------------eEEeCCEEEEccCCCCCCCc
Q 023957 66 SVINH------------TDYL--VNGRIVASPAINITENEVLT--AEG------------RRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 66 ~~~~~------------~~~~--~~~~~~~~~~~~~~~~~v~~--~~~------------~~~~~~~lilatG~~~~~~~ 117 (275)
..... ..++ .+++++.+.....+.+.+.. .++ ..+.||++|+|||+.|..|+
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~~ 164 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLP 164 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCCC
Confidence 00000 0011 25677766665566554433 334 57899999999999866554
Q ss_pred -hH-------HHHHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCE
Q 023957 118 -TR-------TERLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVD 180 (275)
Q Consensus 118 -~~-------~~~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 180 (275)
++ ......+.. +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.||+
T Consensus 165 ~i~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~--~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~ 242 (482)
T 1ojt_A 165 FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYS--TLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDN 242 (482)
T ss_dssp SCCCCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHH--HHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEE
T ss_pred CCCccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEECCccccccCHHHHHHHHHHHHhcCCE
Confidence 21 111111111 8899999999998 4588999999999998888899999999999999999
Q ss_pred EEcCceeeeecCCCCCceEEcCC----CcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEE
Q 023957 181 VKLGERVNLDSVSEGSDTYLTST----GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFA 256 (275)
Q Consensus 181 i~~~~~v~~i~~~~~~~~v~~~~----g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a 256 (275)
+++++.|.+++.+++...+.+.+ |+++++|.||+|+|.+|+.+++.....+++++++|+|.||+++|| +.|+|||
T Consensus 243 i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA 321 (482)
T 1ojt_A 243 IMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYA 321 (482)
T ss_dssp EECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEE
T ss_pred EEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEE
Confidence 99999999998766556677666 778999999999999999887432333446777899999999998 8999999
Q ss_pred eccccCCCCC
Q 023957 257 IGDITDIRVS 266 (275)
Q Consensus 257 ~Gd~~~~~~~ 266 (275)
+|||+..|..
T Consensus 322 ~GD~~~~~~l 331 (482)
T 1ojt_A 322 IGDIVGQPML 331 (482)
T ss_dssp CGGGTCSSCC
T ss_pred EEcccCCCcc
Confidence 9999986543
No 30
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.2e-33 Score=234.46 Aligned_cols=235 Identities=23% Similarity=0.355 Sum_probs=180.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCccc-ccccccccccc--cccEEEEe-eeeE
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFG-KRSVINHTDYL--VNGRIVAS-PAIN 86 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~-~~~~ 86 (275)
.+.+|+|||||+||++||..|. .+.+|+|||+++..++....++........ .+......+++ .++++..+ ++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 3468999999999999999997 689999999999887655544443322211 12222222222 25666644 5667
Q ss_pred eec--CeEEecCCeEEeCCEEEEccCCCCCCCchH----------HHHHHHHh------c------CCcchhhHHHHHhh
Q 023957 87 ITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTR----------TERLNQYQ------A------GGPTGVELAGEIAV 142 (275)
Q Consensus 87 ~~~--~~v~~~~~~~~~~~~lilatG~~~~~~~~~----------~~~l~~~~------~------~g~~~~~~a~~l~~ 142 (275)
++. +.+.+.+++.+.||+||+|||+.|..|.++ .+....+. + +|.+|+|+|..+.
T Consensus 88 id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~- 166 (385)
T 3klj_A 88 IDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAII- 166 (385)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHH-
T ss_pred EECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHH-
Confidence 764 488888999999999999999986654421 12222221 1 8999999999998
Q ss_pred hCCCCEEEEEeCCCcccCc-CCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 143 DFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 143 ~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
..+.+++++++.+.+++. +++.+.+.+.+.+++.|++++.++.+.++ |+++++|.||+|+|++|+
T Consensus 167 -~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 167 -DSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp -HHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEEC
T ss_pred -hCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCcccC
Confidence 458899999999988874 78889999999999999999999998877 567999999999999999
Q ss_pred chhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 222 SDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
.++++..++ ..+ +| +.||++++| +.|+|||+|||+..+..
T Consensus 233 ~~~~~~~gl--~~~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~~ 272 (385)
T 3klj_A 233 LDFIKDTEI--ASK-RG-ILVNDHMET-SIKDIYACGDVAEFYGK 272 (385)
T ss_dssp CGGGTTSCC--CBS-SS-EEECTTCBC-SSTTEEECGGGEEETTB
T ss_pred hhhhhhcCC--CcC-CC-EEECCCccc-CCCCEEEEEeeEecCCC
Confidence 999887766 333 44 999999999 89999999999987653
No 31
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.2e-33 Score=244.13 Aligned_cols=252 Identities=18% Similarity=0.217 Sum_probs=184.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC------cccccccc---cc---------------c-cCCccc--
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY------FEITWASL---RA---------------M-VEPSFG-- 63 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~------~~~~~~~~---~~---------------~-~~~~~~-- 63 (275)
.+|||+|||||++|+++|+.|+ .|++|+|||+++. +|+.+... +. . ....+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 3589999999999999999998 6999999999873 33221110 00 0 000000
Q ss_pred -----cccccccc------------cc--ccccEEEEeeeeEeecC--eEEecCC--eEEeCCEEEEccCCCCCCCchH-
Q 023957 64 -----KRSVINHT------------DY--LVNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDPVPKTR- 119 (275)
Q Consensus 64 -----~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~lilatG~~~~~~~~~- 119 (275)
........ .. ..+++++.+....++.. .+...++ ..+.||++|+|||+.|..|+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~ 161 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAP 161 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCC
Confidence 00000000 00 12567777777777665 4445556 5789999999999986643211
Q ss_pred --------HHHHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEE
Q 023957 120 --------TERLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVK 182 (275)
Q Consensus 120 --------~~~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~ 182 (275)
......+.. +|.+++|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.|++++
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~ 239 (476)
T 3lad_A 162 VDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWA--RLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKIL 239 (476)
T ss_dssp CCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred CCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHH--HcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEE
Confidence 112211111 8889999999998 568999999999999888889999999999999999999
Q ss_pred cCceeeeecCCCCCceEEcCCC---cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEecc
Q 023957 183 LGERVNLDSVSEGSDTYLTSTG---DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGD 259 (275)
Q Consensus 183 ~~~~v~~i~~~~~~~~v~~~~g---~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd 259 (275)
+++.|.+++.+++...+.+.++ +++++|.||+|+|++|+.+++.....+++++++|++.||++++| +.|+|||+||
T Consensus 240 ~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD 318 (476)
T 3lad_A 240 LGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGD 318 (476)
T ss_dssp ETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGG
T ss_pred ECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEc
Confidence 9999999987777777776654 67999999999999999876544444557888999999999998 8999999999
Q ss_pred ccCCCCC
Q 023957 260 ITDIRVS 266 (275)
Q Consensus 260 ~~~~~~~ 266 (275)
|+..|..
T Consensus 319 ~~~~~~~ 325 (476)
T 3lad_A 319 VVRGAML 325 (476)
T ss_dssp GSSSCCC
T ss_pred cCCCccc
Confidence 9976654
No 32
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=9.1e-34 Score=244.75 Aligned_cols=251 Identities=19% Similarity=0.175 Sum_probs=183.5
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccccc--------------------ccCCc-------ccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA--------------------MVEPS-------FGK 64 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~--------------------~~~~~-------~~~ 64 (275)
++||+|||||++|+++|..|+ .|++|+|||+++.+|+.|..... ..... ...
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNL 85 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCH
Confidence 489999999999999999998 69999999999877654321100 00000 000
Q ss_pred ccccc------------ccccc--cccEEEEeeeeEeecC--eEEecC-C-eEEeCCEEEEccCCCCCCCchH-------
Q 023957 65 RSVIN------------HTDYL--VNGRIVASPAINITEN--EVLTAE-G-RRVVYDYLVIATGHKDPVPKTR------- 119 (275)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~~~~~~~~--~v~~~~-~-~~~~~~~lilatG~~~~~~~~~------- 119 (275)
..... ..+++ .+++++.+....++.. .+.+.+ + ..+.||++|+|||+.|..|+..
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~v 165 (474)
T 1zmd_A 86 DKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTI 165 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCcE
Confidence 00000 01111 2567777766666665 344455 4 5799999999999986655421
Q ss_pred --HHHHHHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCcee
Q 023957 120 --TERLNQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERV 187 (275)
Q Consensus 120 --~~~l~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v 187 (275)
......+. + +|.+|+|+|..+. ..+.+++++++.+.+++ .+++++.+.+.+.+++.||+++.+++|
T Consensus 166 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v 243 (474)
T 1zmd_A 166 VSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQ--RLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKV 243 (474)
T ss_dssp ECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred EcHHHHhhccccCceEEEECCCHHHHHHHHHHH--HcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceE
Confidence 11111111 1 8899999999998 46899999999999888 888899999999999999999999999
Q ss_pred eeecCCCCC-ceEE-----cCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEecccc
Q 023957 188 NLDSVSEGS-DTYL-----TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 261 (275)
Q Consensus 188 ~~i~~~~~~-~~v~-----~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~ 261 (275)
++++.+++. +.+. ..+++++++|.||+|+|.+|+.+++.....+++++++|+|.||+++|| +.|+|||+|||+
T Consensus 244 ~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 322 (474)
T 1zmd_A 244 TGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVV 322 (474)
T ss_dssp EEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGS
T ss_pred EEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeecC
Confidence 999876554 5555 356778999999999999999887432223346777899999999998 899999999999
Q ss_pred CCCCC
Q 023957 262 DIRVS 266 (275)
Q Consensus 262 ~~~~~ 266 (275)
..+..
T Consensus 323 ~~~~~ 327 (474)
T 1zmd_A 323 AGPML 327 (474)
T ss_dssp SSCCC
T ss_pred CCCcc
Confidence 86643
No 33
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=6.8e-34 Score=244.89 Aligned_cols=245 Identities=19% Similarity=0.219 Sum_probs=182.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccccccc--------------------CCccccccc----
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV--------------------EPSFGKRSV---- 67 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~--------------------~~~~~~~~~---- 67 (275)
++||+|||||++|+++|+.|+ .|++|+||||++.+|+.|....... ...+.....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 589999999999999999998 6999999998888876543211000 000000000
Q ss_pred ---------cccccc--ccccEEEEeeeeEeecC--eEEecCCeE--EeCCEEEEccCCCCCCCchH-------HHHHH-
Q 023957 68 ---------INHTDY--LVNGRIVASPAINITEN--EVLTAEGRR--VVYDYLVIATGHKDPVPKTR-------TERLN- 124 (275)
Q Consensus 68 ---------~~~~~~--~~~~~~~~~~~~~~~~~--~v~~~~~~~--~~~~~lilatG~~~~~~~~~-------~~~l~- 124 (275)
.....+ ..+++++.+.+..++.. .+...++.. +.||++|+|||+.|..|.++ ...+.
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~t~~~~~~ 163 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLTSDDIFG 163 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGGGSBCHHHHHS
T ss_pred HhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCccceEeHHHHHH
Confidence 000111 12667777777777766 555667777 99999999999886655432 12222
Q ss_pred ---HHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcC-CcchHHHHHHHHHhCCCEEEcCceeeeec
Q 023957 125 ---QYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI-GPKAGDKTRDWLISKKVDVKLGERVNLDS 191 (275)
Q Consensus 125 ---~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 191 (275)
.+.. +|.+++|+|..+. ..+.+++++.+.+.+++.. ++++.+.+.+.++ ++++.++.|++++
T Consensus 164 ~~~~l~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~ 238 (466)
T 3l8k_A 164 YKTSFRKLPQDMVIIGAGYIGLEIASIFR--LMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVK 238 (466)
T ss_dssp TTCSCCSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEE
T ss_pred HHHHHhhCCCeEEEECCCHHHHHHHHHHH--HcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEE
Confidence 1111 8899999999998 5689999999999988877 8888888887775 9999999999998
Q ss_pred CCC-CCceEEcC--CCc--EEeecEEEEcCCCCCCchh-hcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 192 VSE-GSDTYLTS--TGD--TINADCHFLCTGKPVGSDW-LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 192 ~~~-~~~~v~~~--~g~--~~~~d~vv~a~G~~~~~~~-~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
.++ +.+.+.+. +|+ ++++|.||+|+|.+|+..+ +... +++++++| +.||++++| +.|+|||+|||+..|.
T Consensus 239 ~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~--gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~~~ 314 (466)
T 3l8k_A 239 KIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREI--GLSISKTG-IVVDETMKT-NIPNVFATGDANGLAP 314 (466)
T ss_dssp EEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGG--TCCBCSSS-BCCCTTCBC-SSTTEEECGGGTCSCC
T ss_pred EcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccchhhc--CceeCCCC-EeECCCccC-CCCCEEEEEecCCCCc
Confidence 765 56667776 666 8999999999999998873 3444 44778889 999999999 8999999999998754
Q ss_pred C
Q 023957 266 S 266 (275)
Q Consensus 266 ~ 266 (275)
.
T Consensus 315 ~ 315 (466)
T 3l8k_A 315 Y 315 (466)
T ss_dssp S
T ss_pred c
Confidence 4
No 34
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.2e-33 Score=229.80 Aligned_cols=239 Identities=18% Similarity=0.200 Sum_probs=171.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCc-cc-ccc---cccccccccccEEEEeeeeE
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPS-FG-KRS---VINHTDYLVNGRIVASPAIN 86 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~ 86 (275)
++||+|||||++|+++|+.|+ .|++|+|||++...+..+.......... .. ... .......+.++.++..++..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 81 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTD 81 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEE
Confidence 489999999999999999998 6999999999875543322211111111 00 000 11111122356777777777
Q ss_pred eecC----eEEecCCeEEeCCEEEEccCCCCCCC---chHH---------HHHH--HHhc-------CCcchhhHHHHHh
Q 023957 87 ITEN----EVLTAEGRRVVYDYLVIATGHKDPVP---KTRT---------ERLN--QYQA-------GGPTGVELAGEIA 141 (275)
Q Consensus 87 ~~~~----~v~~~~~~~~~~~~lilatG~~~~~~---~~~~---------~~l~--~~~~-------~g~~~~~~a~~l~ 141 (275)
++.. .+.+.++..+.||++|+|||..|..| +... .... .+.. +|.+++++|..+.
T Consensus 82 i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~ 161 (297)
T 3fbs_A 82 AKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLP 161 (297)
T ss_dssp EEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGG
T ss_pred EEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhh
Confidence 7543 67777888899999999999985544 3211 0001 1111 7889999999998
Q ss_pred hhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 142 VDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 142 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
. .+ +++++.+.+. .+.+.+.+.+++.||+++. +.|++++.++ .+.+.+|+++++|.||+++|+.|+
T Consensus 162 ~--~g-~v~~v~~~~~-------~~~~~~~~~l~~~gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~p~ 227 (297)
T 3fbs_A 162 D--WG-ETTFFTNGIV-------EPDADQHALLAARGVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLRIT 227 (297)
T ss_dssp G--TS-EEEEECTTTC-------CCCHHHHHHHHHTTCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEECC
T ss_pred h--cC-cEEEEECCCC-------CCCHHHHHHHHHCCcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcccC
Confidence 5 36 9999987765 3456677888899999995 8899997543 688889999999999999999998
Q ss_pred chhhcccccccccCCCC-ceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 222 SDWLKDTILKDSLDTHG-MLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 222 ~~~~~~~~~~~~~~~~g-~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
.++++..++.....++| ++.||++++| +.|+|||+|||+..|..
T Consensus 228 ~~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~~~~~~~ 272 (297)
T 3fbs_A 228 VDWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDVARPAGS 272 (297)
T ss_dssp CSCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGGGCTTCC
T ss_pred chhHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeecCCchHH
Confidence 88887766633222467 8999999998 89999999999986543
No 35
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=7.2e-34 Score=245.61 Aligned_cols=251 Identities=19% Similarity=0.256 Sum_probs=183.0
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---c---------------cccCCcc-------ccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---R---------------AMVEPSF-------GKR 65 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~---------------~~~~~~~-------~~~ 65 (275)
.++||+|||||++|+++|+.|+ .|++|+|||++. +|+.+... + ......+ ...
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWR 97 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 3589999999999999999998 699999999875 44322110 0 0000000 000
Q ss_pred ccccc------------ccc--ccccEEEEeeeeEeecC--eEEecCCeEEeCCEEEEccCCCCCCC---chH-------
Q 023957 66 SVINH------------TDY--LVNGRIVASPAINITEN--EVLTAEGRRVVYDYLVIATGHKDPVP---KTR------- 119 (275)
Q Consensus 66 ~~~~~------------~~~--~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~lilatG~~~~~~---~~~------- 119 (275)
....+ ... ..+++++.+.+..++.. .+. .++..+.||++|+|||+.|..| .++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~~~~~ 176 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGASLGIT 176 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGGGSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCceeEc
Confidence 00000 000 12567777776666544 444 4677899999999999987665 332
Q ss_pred HHHHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeee
Q 023957 120 TERLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLD 190 (275)
Q Consensus 120 ~~~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i 190 (275)
.+.+..+.. +|.+|+|+|..+. ..+.+++++.+.+.+++.+++++.+.+.+.+++.||+++.++.|+++
T Consensus 177 ~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i 254 (478)
T 3dk9_A 177 SDGFFQLEELPGRSVIVGAGYIAVEMAGILS--ALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEV 254 (478)
T ss_dssp HHHHTTCCSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEE
T ss_pred hHHhhchhhcCccEEEECCCHHHHHHHHHHH--HcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEE
Confidence 122222221 8899999999998 46899999999999888889999999999999999999999999999
Q ss_pred cCCCCC--ceEEcCC-------CcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEecccc
Q 023957 191 SVSEGS--DTYLTST-------GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 261 (275)
Q Consensus 191 ~~~~~~--~~v~~~~-------g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~ 261 (275)
+..++. +.+.+.+ |+++++|.||+|+|++|+...+.....+++++++|++.||++++| +.|+|||+|||+
T Consensus 255 ~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 333 (478)
T 3dk9_A 255 KKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVC 333 (478)
T ss_dssp EECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGG
T ss_pred EEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecC
Confidence 866544 4566654 257999999999999999875433344457888999999999998 899999999999
Q ss_pred CCCCCC
Q 023957 262 DIRVSA 267 (275)
Q Consensus 262 ~~~~~~ 267 (275)
..|...
T Consensus 334 ~~~~~~ 339 (478)
T 3dk9_A 334 GKALLT 339 (478)
T ss_dssp CSSCCH
T ss_pred CCCccH
Confidence 666543
No 36
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.4e-33 Score=240.23 Aligned_cols=244 Identities=19% Similarity=0.259 Sum_probs=173.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---cc-----------c--------cCC--ccccccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---RA-----------M--------VEP--SFGKRSV 67 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~~-----------~--------~~~--~~~~~~~ 67 (275)
++||+|||||++|+++|..|+ .|++|+|||++. +|+.|... +. . ... ......+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 489999999999999999998 699999999986 44332110 00 0 000 0000000
Q ss_pred c--------c----cccc--ccccEEEEeeeeEeecCeEEecC-------------CeEEeCCEEEEccCCCCCCCchH-
Q 023957 68 I--------N----HTDY--LVNGRIVASPAINITENEVLTAE-------------GRRVVYDYLVIATGHKDPVPKTR- 119 (275)
Q Consensus 68 ~--------~----~~~~--~~~~~~~~~~~~~~~~~~v~~~~-------------~~~~~~~~lilatG~~~~~~~~~- 119 (275)
. . .... ..+++++.+.+..++.+.+...+ +..+.||++|+|||+.|..|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~G 160 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKG 160 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCCCC
Confidence 0 0 0011 12567777666656655554433 56789999999999997766432
Q ss_pred ------HHHHHHHh--c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCc
Q 023957 120 ------TERLNQYQ--A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGE 185 (275)
Q Consensus 120 ------~~~l~~~~--~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~ 185 (275)
.+.+..+. + +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.||++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~ 238 (500)
T 1onf_A 161 IENTISSDEFFNIKESKKIGIVGSGYIAVELINVIK--RLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFA 238 (500)
T ss_dssp GGGCEEHHHHTTCCCCSEEEEECCSHHHHHHHHHHH--TTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCcccCHHHHhccCCCCeEEEECChHHHHHHHHHHH--HcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECC
Confidence 11221111 1 7899999999998 668999999999998888899999999999999999999999
Q ss_pred eeeeecCCCC-CceEEcCCCcE-EeecEEEEcCCCCCCchhh--cccccccccCCCCceEeCCCccccCCCCeEEecccc
Q 023957 186 RVNLDSVSEG-SDTYLTSTGDT-INADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 261 (275)
Q Consensus 186 ~v~~i~~~~~-~~~v~~~~g~~-~~~d~vv~a~G~~~~~~~~--~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~ 261 (275)
.|++++.+++ ...+.+.+|++ +++|.||+|+|.+|+.+.+ +..++ ++ ++|++.||+++|| +.|+|||+|||+
T Consensus 239 ~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~--~~-~~G~i~vd~~~~t-~~~~iya~GD~~ 314 (500)
T 1onf_A 239 DVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNV--ET-NNNYIVVDENQRT-SVNNIYAVGDCC 314 (500)
T ss_dssp CEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTC--CB-SSSCEEECTTCBC-SSSSEEECSTTE
T ss_pred EEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCc--cc-cCCEEEECCCccc-CCCCEEEEeccc
Confidence 9999986543 36778888987 9999999999999998644 44444 56 6899999999998 899999999999
Q ss_pred CC
Q 023957 262 DI 263 (275)
Q Consensus 262 ~~ 263 (275)
..
T Consensus 315 ~~ 316 (500)
T 1onf_A 315 MV 316 (500)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 37
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-33 Score=243.61 Aligned_cols=252 Identities=19% Similarity=0.210 Sum_probs=183.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccc-----------------------cC---Ccccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM-----------------------VE---PSFGK 64 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~-----------------------~~---~~~~~ 64 (275)
.++||+|||||++|+++|..|+ .|++|+|||+++.+|+.+...... .. .....
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 4689999999999999999998 699999999997776543211000 00 00000
Q ss_pred ccccc------------ccccc--cccEEEEeeeeEeecCeE--EecCC--eEEeCCEEEEccCCCCCCCchH-------
Q 023957 65 RSVIN------------HTDYL--VNGRIVASPAINITENEV--LTAEG--RRVVYDYLVIATGHKDPVPKTR------- 119 (275)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~v--~~~~~--~~~~~~~lilatG~~~~~~~~~------- 119 (275)
..... ...++ .+++++.+....++.+.+ .+.++ ..+.||++|+|||+.|..|+..
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~v 164 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKI 164 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCcccE
Confidence 00000 00111 256777666666666543 33456 6899999999999986655421
Q ss_pred --HHHHHHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceee
Q 023957 120 --TERLNQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN 188 (275)
Q Consensus 120 --~~~l~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~ 188 (275)
......+. + +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.||+++++++|.
T Consensus 165 ~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~ 242 (470)
T 1dxl_A 165 VSSTGALALSEIPKKLVVIGAGYIGLEMGSVWG--RIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVV 242 (470)
T ss_dssp ECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHH--HHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEE
T ss_pred EeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHH--HcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEE
Confidence 11111111 1 7899999999998 458899999999998888888999999999999999999999999
Q ss_pred eecCCCCCceEEcC---CC--cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCC
Q 023957 189 LDSVSEGSDTYLTS---TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 263 (275)
Q Consensus 189 ~i~~~~~~~~v~~~---~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~ 263 (275)
+++.+++.+.+.+. +| +++++|.||+|+|.+|+.+++.....+++++++|+|.||++++| +.|+|||+|||+..
T Consensus 243 ~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~ 321 (470)
T 1dxl_A 243 GVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIPG 321 (470)
T ss_dssp EEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSS
T ss_pred EEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCCC
Confidence 99876655666654 44 68999999999999999888433333446777899999999998 89999999999986
Q ss_pred CCC
Q 023957 264 RVS 266 (275)
Q Consensus 264 ~~~ 266 (275)
+..
T Consensus 322 ~~~ 324 (470)
T 1dxl_A 322 PML 324 (470)
T ss_dssp CCC
T ss_pred Ccc
Confidence 543
No 38
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=3.8e-32 Score=231.62 Aligned_cols=251 Identities=24% Similarity=0.239 Sum_probs=173.6
Q ss_pred CeEEEEcCChHHHHHHHHhh---cCCcEEEEcCCCCccccccccccccCCccccccccccccccc--ccEEEEeeeeEee
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV--NGRIVASPAINIT 88 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~---~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 88 (275)
++|+|||||+||+++|.+|+ ++++|+|||+++++.+.+.............+...+..+++. +++++.+++..++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id 82 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEEE
Confidence 58999999999999999997 358999999999876643322111111112223333444433 6888999998887
Q ss_pred cC--eEEecCCeEEeCCEEEEccCCCC--CCCchH--------H-------HHHHHHhc-------CCcchh-------h
Q 023957 89 EN--EVLTAEGRRVVYDYLVIATGHKD--PVPKTR--------T-------ERLNQYQA-------GGPTGV-------E 135 (275)
Q Consensus 89 ~~--~v~~~~~~~~~~~~lilatG~~~--~~~~~~--------~-------~~l~~~~~-------~g~~~~-------~ 135 (275)
.. +|.+++|+++.||+||+|||+.+ .+|+.. . +.++.+.. ++..++ |
T Consensus 83 ~~~~~V~~~~g~~i~YD~LViAtG~~~~~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e 162 (430)
T 3hyw_A 83 PDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYE 162 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHH
T ss_pred CCCCEEEECCCCEEECCEEEEeCCCCccCCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHH
Confidence 54 89999999999999999999873 344422 1 11222221 222222 3
Q ss_pred HHHHHhh----hC--CCCEEEEEeCCCcccC---cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCC--
Q 023957 136 LAGEIAV----DF--PEKKVTLVHKGSRLLE---FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG-- 204 (275)
Q Consensus 136 ~a~~l~~----~~--~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-- 204 (275)
.+..+.. .. ...+++++...+.+.. ...+...+.+.+.++++||++++++.|++++. +...+...+|
T Consensus 163 ~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~~~~~~~~g~~ 240 (430)
T 3hyw_A 163 FALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNT 240 (430)
T ss_dssp HHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCE
T ss_pred HHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC--CceEEEeeCCCc
Confidence 3322221 11 1357888887765432 34455677788899999999999999999974 3444554444
Q ss_pred cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCCC
Q 023957 205 DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 267 (275)
Q Consensus 205 ~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~~ 267 (275)
+++++|.+++++|.+|+ +++...+..+..+.+|++.||+++|++++|+|||+|||+..|+..
T Consensus 241 ~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~ 302 (430)
T 3hyw_A 241 HEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIE 302 (430)
T ss_dssp EEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSS
T ss_pred eEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcc
Confidence 48999999999999985 666666654455566789999999977999999999999988643
No 39
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.4e-33 Score=242.37 Aligned_cols=250 Identities=21% Similarity=0.243 Sum_probs=181.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---c--------------------ccc--CCcccccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---R--------------------AMV--EPSFGKRS 66 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~--------------------~~~--~~~~~~~~ 66 (275)
++||+|||||++|+++|..|+ .|++|+|||++ .+|+.+... + +.. ........
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 479999999999999999998 69999999998 444332110 0 000 00000000
Q ss_pred ccc------------ccccc--cccEEEEeeeeEeecC--eEEecCC-eEEeCCEEEEccCCCCCCCchH--------HH
Q 023957 67 VIN------------HTDYL--VNGRIVASPAINITEN--EVLTAEG-RRVVYDYLVIATGHKDPVPKTR--------TE 121 (275)
Q Consensus 67 ~~~------------~~~~~--~~~~~~~~~~~~~~~~--~v~~~~~-~~~~~~~lilatG~~~~~~~~~--------~~ 121 (275)
... ..+++ .+++++.+....++.+ .+.+.++ ..+.||++|+|||+.|..|+.. ..
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~v~~~~ 161 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDST 161 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccceEecHH
Confidence 000 00111 2567777766666655 4444556 6789999999999986655421 12
Q ss_pred HHHHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecC
Q 023957 122 RLNQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSV 192 (275)
Q Consensus 122 ~l~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 192 (275)
....+. + +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.|++++.++.|++++.
T Consensus 162 ~~~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 162 GALNLGEVPKSLVVIGGGYIGIELGTAYA--NFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEE 239 (455)
T ss_dssp HHHTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEE
T ss_pred HHhccccCCCeEEEECCCHHHHHHHHHHH--HcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEE
Confidence 222211 1 7899999999998 4689999999999888888888999999999999999999999999986
Q ss_pred CCCCceEEcC---CCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 193 SEGSDTYLTS---TGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 193 ~~~~~~v~~~---~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
+++.+.+.+. +++++++|.||+|+|.+|+.+++.....+++++++|++.||+++|| +.|+|||+|||+..+..
T Consensus 240 ~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~ 315 (455)
T 1ebd_A 240 REDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPGPAL 315 (455)
T ss_dssp ETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSSCCC
T ss_pred eCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCCccc
Confidence 6555555554 4568999999999999999887432333446777899999999998 89999999999986543
No 40
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=4.1e-32 Score=240.21 Aligned_cols=248 Identities=21% Similarity=0.367 Sum_probs=185.0
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCccccccccccccCCccc--ccccccccc-cc--cccEEE-Ee
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTD-YL--VNGRIV-AS 82 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~--~~~~~~-~~ 82 (275)
+++||+|||||+||++||++|+ . |++|+|||+++.+++....++........ ........+ +. .++.+. ..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 4589999999999999999997 4 89999999999887655443332222111 111111111 11 145553 35
Q ss_pred eeeEeecC--eEEe---cCCe--EEeCCEEEEccCCCCCCCc---h-H------------HHHHHH----Hh-c------
Q 023957 83 PAINITEN--EVLT---AEGR--RVVYDYLVIATGHKDPVPK---T-R------------TERLNQ----YQ-A------ 128 (275)
Q Consensus 83 ~~~~~~~~--~v~~---~~~~--~~~~~~lilatG~~~~~~~---~-~------------~~~l~~----~~-~------ 128 (275)
.+..++.. .+.+ .++. .+.||++++|||+.|..|. . + ...+.. .. +
T Consensus 115 ~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViG 194 (588)
T 3ics_A 115 EVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIG 194 (588)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred EEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEEC
Confidence 55566533 4444 2454 6889999999998855443 2 1 111111 11 1
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEe
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTIN 208 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ 208 (275)
+|.+|+|+|..+. ..+.+++++.+.+.+++.+++++.+.+.+.+++.|++++.++.|++++.+++ .+.+.+|++++
T Consensus 195 gG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~ 270 (588)
T 3ics_A 195 GGFIGVEMVENLR--ERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSVIQ 270 (588)
T ss_dssp CSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCEEE
T ss_pred CCHHHHHHHHHHH--hCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCEEE
Confidence 8899999999998 5689999999999988888889999999999999999999999999976543 57778898999
Q ss_pred ecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 209 ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 209 ~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
+|.||+|+|++|+.++++..++ +++++|++.||++++| +.|+|||+|||+..++.
T Consensus 271 ~D~Vi~a~G~~p~~~~l~~~g~--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 325 (588)
T 3ics_A 271 TDMLILAIGVQPESSLAKGAGL--ALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDF 325 (588)
T ss_dssp CSEEEECSCEEECCHHHHHTTC--CBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBT
T ss_pred cCEEEEccCCCCChHHHHhcCc--eEcCCCCEEECCcccc-CCCCEEEeeeeeecccc
Confidence 9999999999999888776655 6778899999999999 89999999999976553
No 41
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=5.5e-32 Score=227.63 Aligned_cols=246 Identities=20% Similarity=0.261 Sum_probs=178.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cC--CcEEEEcCCCCccccccccccccCCccc-ccccccc-cccc--cccEEEE-ee
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FS--ADVTLIDPKEYFEITWASLRAMVEPSFG-KRSVINH-TDYL--VNGRIVA-SP 83 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g--~~v~vie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~--~~~~~~~-~~ 83 (275)
.++||+|||||++|+++|..|+ .| .+|+++|++....+....+......... ....... ..+. .+++++. ..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 82 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTR 82 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCE
Confidence 3589999999999999999998 46 5799999987332222222222211111 1111111 1111 2566654 34
Q ss_pred eeEeec--CeEEecCCeEEeCCEEEEccCCCCCCCchH------------HHHHHH----H--hc------CCcchhhHH
Q 023957 84 AINITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTR------------TERLNQ----Y--QA------GGPTGVELA 137 (275)
Q Consensus 84 ~~~~~~--~~v~~~~~~~~~~~~lilatG~~~~~~~~~------------~~~l~~----~--~~------~g~~~~~~a 137 (275)
+..++. +.+.+++ ..+.||++++|||+.|..|+++ ...+.. + .+ +|.+|+|+|
T Consensus 83 v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A 161 (384)
T 2v3a_A 83 VTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFA 161 (384)
T ss_dssp CCEEEGGGTEEEETT-EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHH
T ss_pred EEEEECCCCEEEECC-cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHH
Confidence 555654 4677654 5799999999999986654321 111111 1 11 889999999
Q ss_pred HHHhhhCCCCEEEEEeCCCcccCc-CCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcC
Q 023957 138 GEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCT 216 (275)
Q Consensus 138 ~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~ 216 (275)
..+. ..+.+++++++.+.+++. .++.+.+.+.+.+++.|++++.+++|++++.+++...+.+.+|+++++|.||+|+
T Consensus 162 ~~l~--~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~ 239 (384)
T 2v3a_A 162 NDLS--SGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAV 239 (384)
T ss_dssp HHHH--HTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECS
T ss_pred HHHH--hCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECc
Confidence 9998 468999999999887765 4777889999999999999999999999987666677888899999999999999
Q ss_pred CCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 217 GKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 217 G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
|.+|+.++++..++ +++ +| +.||++++| +.|+|||+|||+..+.
T Consensus 240 G~~p~~~l~~~~g~--~~~-~g-i~vd~~~~t-~~~~IyA~GD~~~~~~ 283 (384)
T 2v3a_A 240 GLRPRTELAFAAGL--AVN-RG-IVVDRSLRT-SHANIYALGDCAEVDG 283 (384)
T ss_dssp CEEECCHHHHHTTC--CBS-SS-EEECTTCBC-SSTTEEECGGGEEETT
T ss_pred CCCcCHHHHHHCCC--CCC-CC-EEECCCCCC-CCCCEEEeeeeeeECC
Confidence 99999888776665 454 57 999999998 8999999999996543
No 42
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=7.2e-32 Score=233.55 Aligned_cols=246 Identities=19% Similarity=0.273 Sum_probs=179.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cC---CcEEEEcCCCCccccccccccccCCc--ccccccccccccc--cccEEE-Eee
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FS---ADVTLIDPKEYFEITWASLRAMVEPS--FGKRSVINHTDYL--VNGRIV-ASP 83 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g---~~v~vie~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~-~~~ 83 (275)
++||+|||||++|+++|..|+ .| .+|+|||+++..++.+..+....... ..........+.+ .++++. ...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 489999999999999999997 46 99999999987665443322111111 0111111111111 145553 334
Q ss_pred eeEee--cCeEEec-C--CeEEeCCEEEEccCCCCCCCc---hH-----------------------HHHHHHHh--c--
Q 023957 84 AINIT--ENEVLTA-E--GRRVVYDYLVIATGHKDPVPK---TR-----------------------TERLNQYQ--A-- 128 (275)
Q Consensus 84 ~~~~~--~~~v~~~-~--~~~~~~~~lilatG~~~~~~~---~~-----------------------~~~l~~~~--~-- 128 (275)
+..++ .+.+.+. + +..+.||++|+|||+.|..|. .. ...+.... .
T Consensus 115 v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 194 (490)
T 2bc0_A 115 VQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDI 194 (490)
T ss_dssp EEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTC
T ss_pred EEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCC
Confidence 55565 3456554 4 357899999999998865442 21 12222222 1
Q ss_pred -------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEE
Q 023957 129 -------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYL 200 (275)
Q Consensus 129 -------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~ 200 (275)
+|.+|+|+|..+. ..+.+++++++.+.+++ .+++++.+.+.+.+++.||++++++.|++++.++....+.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~ 272 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQ--RKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKII 272 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHH--HTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHH--HCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEE
Confidence 8899999999998 45899999999998887 6888899999999999999999999999998643222355
Q ss_pred cCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 201 TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 201 ~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
+ +|+++++|.||+|+|++|+.++++.. + +++++|++.||+++|| +.|+|||+|||+..+.
T Consensus 273 ~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l--~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~ 332 (490)
T 2bc0_A 273 T-DKNEYDVDMVILAVGFRPNTTLGNGK-I--DLFRNGAFLVNKRQET-SIPGVYAIGDCATIYD 332 (490)
T ss_dssp E-SSCEEECSEEEECCCEEECCGGGTTC-S--CBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEE
T ss_pred E-CCcEEECCEEEECCCCCcChHHHHhh-h--ccCCCCCEEECCCccc-CCCCEEEeeeeEEecc
Confidence 5 67889999999999999998887654 3 6678899999999999 8999999999998654
No 43
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=2.5e-33 Score=243.18 Aligned_cols=252 Identities=19% Similarity=0.173 Sum_probs=188.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC--------Ccccc---cc-----ccc------ccc---CC--c---
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE--------YFEIT---WA-----SLR------AMV---EP--S--- 61 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~--------~~~~~---~~-----~~~------~~~---~~--~--- 61 (275)
.|||+||||||+|+.||.+++ .|.+|+|||+.. .+|+. ++ .+. ... .. .
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 489999999999999999998 699999999754 23421 00 000 000 00 0
Q ss_pred ----cccccccccc------------ccc--cccEEEEeeeeEeecCeEEe------cCCeEEeCCEEEEccCCCCCCCc
Q 023957 62 ----FGKRSVINHT------------DYL--VNGRIVASPAINITENEVLT------AEGRRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 62 ----~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~~lilatG~~~~~~~ 117 (275)
+....+..+. ..+ .+++++.+.....+.+++.. .+.+.+.++++++|||+.|.+|+
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~ 201 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPD 201 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCS
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCC
Confidence 0000000000 001 25788888888888886643 13357899999999999988874
Q ss_pred h-H--------HHHHHHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCC
Q 023957 118 T-R--------TERLNQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV 179 (275)
Q Consensus 118 ~-~--------~~~l~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 179 (275)
. . .+.+-.+. + +|++|+|+|..+. ..|.+|+++.+ +.+++.+++++.+.+.+.+++.|+
T Consensus 202 ~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~--~lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi 278 (542)
T 4b1b_A 202 DVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLN--SLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGV 278 (542)
T ss_dssp SSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHH--HHTCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTC
T ss_pred cccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHH--hcCCeEEEecc-cccccccchhHHHHHHHHHHhhcc
Confidence 2 1 11121111 1 9999999999998 57999999987 466788899999999999999999
Q ss_pred EEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCce-EeCCCccccCCCCeEEec
Q 023957 180 DVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGML-MVDENLRVKGQKNIFAIG 258 (275)
Q Consensus 180 ~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i-~v~~~~~~~~~~~v~a~G 258 (275)
++++++.+..++..++.+.+.+.+++++.+|.|++|+|.+||.+.+.....++.++.++.+ .+|+++|| +.|+|||+|
T Consensus 279 ~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiG 357 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVG 357 (542)
T ss_dssp EEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECT
T ss_pred eeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccc-cCCCeEEec
Confidence 9999999999998888888888899899999999999999999998887777777776654 78889998 899999999
Q ss_pred cccCC-CCCCC
Q 023957 259 DITDI-RVSAS 268 (275)
Q Consensus 259 d~~~~-~~~~~ 268 (275)
||+.. |..++
T Consensus 358 Dv~~~~p~La~ 368 (542)
T 4b1b_A 358 DVAENVPELAP 368 (542)
T ss_dssp TSBTTCCCCHH
T ss_pred cccCCchhHHH
Confidence 99953 55543
No 44
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=5.1e-33 Score=238.88 Aligned_cols=251 Identities=20% Similarity=0.235 Sum_probs=184.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccc---c-------------------cc--CCccccccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR---A-------------------MV--EPSFGKRSV 67 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~---~-------------------~~--~~~~~~~~~ 67 (275)
++||+|||||++|+++|..|+ .|++|+|||+++.+|+.+.... . .. ........+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPAL 80 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHH
Confidence 379999999999999999998 6999999999977765432110 0 00 000000000
Q ss_pred ccc------------cccc--cccEEEEeeeeEeecCeEEec-CCeEEeCCEEEEccCCCCCCCchH---------HHHH
Q 023957 68 INH------------TDYL--VNGRIVASPAINITENEVLTA-EGRRVVYDYLVIATGHKDPVPKTR---------TERL 123 (275)
Q Consensus 68 ~~~------------~~~~--~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~lilatG~~~~~~~~~---------~~~l 123 (275)
..+ ..++ .+++++.+....++.+.+... ++..+.||++|+|||+.|..|+.. ...+
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~~ 160 (455)
T 2yqu_A 81 MAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEA 160 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCSSSEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCcCcEechHHh
Confidence 000 0111 256777766666665554443 467899999999999986654321 1111
Q ss_pred HHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCC
Q 023957 124 NQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSE 194 (275)
Q Consensus 124 ~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~ 194 (275)
..+. + +|.+|+++|..+. ..+.+++++++.+.+++..++.+.+.+.+.+++.|++++.+++|++++.++
T Consensus 161 ~~~~~~~~~vvIiGgG~~g~e~A~~l~--~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~ 238 (455)
T 2yqu_A 161 LSFPEVPKRLIVVGGGVIGLELGVVWH--RLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA 238 (455)
T ss_dssp TCCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET
T ss_pred hccccCCCeEEEECCCHHHHHHHHHHH--HcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC
Confidence 1111 1 8889999999998 468899999999988888888899999999999999999999999998766
Q ss_pred CCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 195 GSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 195 ~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
+.+.+.+.+|+++++|.||+|+|.+|+.+++.....++.++++|++.||++++| +.|+||++|||+..+..
T Consensus 239 ~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~~~~ 309 (455)
T 2yqu_A 239 KGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRGPML 309 (455)
T ss_dssp TEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSSCCC
T ss_pred CEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCCccC
Confidence 666777778889999999999999998877432333446677899999999998 89999999999987653
No 45
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=1.3e-32 Score=238.06 Aligned_cols=247 Identities=16% Similarity=0.090 Sum_probs=177.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC---------Cccccccccc-----------------------cc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE---------YFEITWASLR-----------------------AM 57 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~---------~~~~~~~~~~-----------------------~~ 57 (275)
..++||+|||||++|++||++|+ .|++|+||||.. .+|+.+.... +.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 34699999999999999999998 699999999521 1343321110 00
Q ss_pred cC---Cccccccccccc------------cc--ccccEEEEeeeeEeecCe--EEecCC-eEEeCCEEEEccCCCCCCCc
Q 023957 58 VE---PSFGKRSVINHT------------DY--LVNGRIVASPAINITENE--VLTAEG-RRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 58 ~~---~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~~--v~~~~~-~~~~~~~lilatG~~~~~~~ 117 (275)
.. ..........+. .. ..+++++.+....++... +.+.++ ..+.||++|+|||+.|..|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~p~ 166 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPD 166 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECCCS
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCCCC
Confidence 00 000000000000 00 125677777777777664 444455 47999999999999877665
Q ss_pred hHHH--------HHHHHhc---------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCE
Q 023957 118 TRTE--------RLNQYQA---------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVD 180 (275)
Q Consensus 118 ~~~~--------~l~~~~~---------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 180 (275)
++.. .+..+.. +|.+++|+|..+. ..+.+++++.+. .+++.+++++.+.+.+.+++.||+
T Consensus 167 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~Gv~ 243 (483)
T 3dgh_A 167 IPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLK--GLGYEPTVMVRS-IVLRGFDQQMAELVAASMEERGIP 243 (483)
T ss_dssp STTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHH--HTTCEEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCC
T ss_pred CCCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHH--HcCCEEEEEeCC-CCCcccCHHHHHHHHHHHHhCCCE
Confidence 4321 1111111 8899999999998 468999999884 567778888999999999999999
Q ss_pred EEcCceeeeecCCCC-CceEEcCCCc-----EEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCe
Q 023957 181 VKLGERVNLDSVSEG-SDTYLTSTGD-----TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNI 254 (275)
Q Consensus 181 i~~~~~v~~i~~~~~-~~~v~~~~g~-----~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v 254 (275)
+++++.|.+++..++ .+.+.+.+++ ++++|.|++|+|.+|+.+++.....++++++ |++.||++++| +.|+|
T Consensus 244 i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~I 321 (483)
T 3dgh_A 244 FLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANI 321 (483)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTE
T ss_pred EEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCE
Confidence 999999999986543 4556665543 7999999999999999888744444557777 99999999998 89999
Q ss_pred EEeccccC
Q 023957 255 FAIGDITD 262 (275)
Q Consensus 255 ~a~Gd~~~ 262 (275)
||+|||+.
T Consensus 322 yA~GD~~~ 329 (483)
T 3dgh_A 322 YAVGDIIY 329 (483)
T ss_dssp EECSTTBT
T ss_pred EEEEcccC
Confidence 99999984
No 46
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=3.7e-33 Score=240.28 Aligned_cols=250 Identities=17% Similarity=0.166 Sum_probs=180.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---cc---------------cc-CCcc------cccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---RA---------------MV-EPSF------GKRS 66 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~~---------------~~-~~~~------~~~~ 66 (275)
++||+|||||++|+++|..|+ .|++|+|||++ .+|+.+... +. .. .... ....
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 479999999999999999998 69999999998 444222100 00 00 0000 0000
Q ss_pred ccc------------ccccc--cccEEEEeeeeEeecC--eEEecCC--eEEeCCEEEEccCCCCCCCchH--------H
Q 023957 67 VIN------------HTDYL--VNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDPVPKTR--------T 120 (275)
Q Consensus 67 ~~~------------~~~~~--~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~lilatG~~~~~~~~~--------~ 120 (275)
... ..+.+ .+++++.+....++.+ .+.+.++ ..+.||++|+|||+.|..|+.. .
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~~~~~ 161 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTY 161 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTTEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCceEEec
Confidence 000 00111 2566666655555544 4455566 6899999999999986554321 1
Q ss_pred HHHHHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeec
Q 023957 121 ERLNQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDS 191 (275)
Q Consensus 121 ~~l~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 191 (275)
.....+. + +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.||+++.++.|++++
T Consensus 162 ~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (464)
T 2a8x_A 162 EEQILSRELPKSIIIAGAGAIGMEFGYVLK--NYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIA 239 (464)
T ss_dssp HHHHTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEE
T ss_pred HHHhhccccCCeEEEECCcHHHHHHHHHHH--HcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEE
Confidence 1221211 1 7899999999998 468999999999998888888999999999999999999999999998
Q ss_pred CCCCCceEEcC-CC--cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 192 VSEGSDTYLTS-TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 192 ~~~~~~~v~~~-~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
.+++.+.+.+. +| +++++|.||+|+|.+|+.+++.....+++++++|+|.||+++|| +.|+|||+|||+..+..
T Consensus 240 ~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 316 (464)
T 2a8x_A 240 DGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNGLLQL 316 (464)
T ss_dssp ECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGCSSCS
T ss_pred EcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCCCccC
Confidence 76655666654 56 67999999999999999887432223346777899999999998 89999999999986543
No 47
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.2e-32 Score=239.69 Aligned_cols=247 Identities=15% Similarity=0.147 Sum_probs=175.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC--------Ccccccccc---c--------------------cccC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE--------YFEITWASL---R--------------------AMVE 59 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~--------~~~~~~~~~---~--------------------~~~~ 59 (275)
..+||+|||||++|++||..|+ .|++|+|||+++ .+|+.+... + +...
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 3589999999999999999998 699999999964 444332111 0 0000
Q ss_pred ---Ccccccccccccc------------c--ccccEEEEeeeeEeecCeE--EecCCe--EEeCCEEEEccCCCCCCCch
Q 023957 60 ---PSFGKRSVINHTD------------Y--LVNGRIVASPAINITENEV--LTAEGR--RVVYDYLVIATGHKDPVPKT 118 (275)
Q Consensus 60 ---~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~v--~~~~~~--~~~~~~lilatG~~~~~~~~ 118 (275)
..........+.+ . ..+++++.+.+..++...+ ...++. .+.||++|+|||+.|..|.+
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~p~i 190 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGI 190 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECCCCC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCCCCC
Confidence 0000000000000 0 1257778888777777744 344453 78999999999998776654
Q ss_pred HHHH-----HHHHhc------------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEE
Q 023957 119 RTER-----LNQYQA------------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDV 181 (275)
Q Consensus 119 ~~~~-----l~~~~~------------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 181 (275)
+... ...+.. +|.+|+|+|..+. ..+.+++++.+. .+++.+++++.+.+.+.+++.||++
T Consensus 191 ~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~--~~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV~v 267 (519)
T 3qfa_A 191 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLA--GIGLDVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIKF 267 (519)
T ss_dssp TTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHH--HTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHH--HcCCeEEEEecc-cccccCCHHHHHHHHHHHHHCCCEE
Confidence 3211 111111 8899999999998 458899999985 6777888899999999999999999
Q ss_pred EcCceeeeecCCC----CCceEE--cCCC-c--EEeecEEEEcCCCCCCchhhcccccccccC-CCCceEeCCCccccCC
Q 023957 182 KLGERVNLDSVSE----GSDTYL--TSTG-D--TINADCHFLCTGKPVGSDWLKDTILKDSLD-THGMLMVDENLRVKGQ 251 (275)
Q Consensus 182 ~~~~~v~~i~~~~----~~~~v~--~~~g-~--~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~-~~g~i~v~~~~~~~~~ 251 (275)
++++.+.+++..+ +.+.+. ..+| + ++++|.|++|+|.+|+.+++.....+++++ .+|+|.||++++| +.
T Consensus 268 ~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~ 346 (519)
T 3qfa_A 268 IRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NV 346 (519)
T ss_dssp EESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SS
T ss_pred EeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CC
Confidence 9998877776432 233333 3455 2 578999999999999988754444455777 5799999999998 89
Q ss_pred CCeEEeccccC
Q 023957 252 KNIFAIGDITD 262 (275)
Q Consensus 252 ~~v~a~Gd~~~ 262 (275)
|+|||+|||+.
T Consensus 347 ~~IyA~GD~~~ 357 (519)
T 3qfa_A 347 PYIYAIGDILE 357 (519)
T ss_dssp TTEEECGGGBS
T ss_pred CCEEEEEeccC
Confidence 99999999983
No 48
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=6.7e-33 Score=239.98 Aligned_cols=247 Identities=17% Similarity=0.117 Sum_probs=177.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcC--------CCCccccccccc-----------------------ccc-
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDP--------KEYFEITWASLR-----------------------AMV- 58 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~--------~~~~~~~~~~~~-----------------------~~~- 58 (275)
.++||+|||||++|++||..|+ .|++|+|||| ...+|+.|.... +..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 4589999999999999999998 6999999997 334554332110 000
Q ss_pred --CCccccccccccc------------cc--ccccEEEEeeeeEeecCe--EEecCC--eEEeCCEEEEccCCCCCCCc-
Q 023957 59 --EPSFGKRSVINHT------------DY--LVNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPK- 117 (275)
Q Consensus 59 --~~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~~--v~~~~~--~~~~~~~lilatG~~~~~~~- 117 (275)
...........+. .. ..+++++.+.+..++.+. +...++ ..+.||++|+|||+.|..|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~ 164 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQ 164 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSS
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCC
Confidence 0000000000000 00 125677877777777664 444455 57899999999999876655
Q ss_pred hHHHH-----HHHHhc------------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCE
Q 023957 118 TRTER-----LNQYQA------------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVD 180 (275)
Q Consensus 118 ~~~~~-----l~~~~~------------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 180 (275)
++... ...+.. +|.+++|+|..+. ..+.+++++.+. .+++.+++++.+.+.+.+++.||+
T Consensus 165 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~ 241 (488)
T 3dgz_A 165 VKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLT--GIGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQ 241 (488)
T ss_dssp CBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHH--HTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHH--HcCCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCE
Confidence 33111 111111 8899999999998 468999999986 456778889999999999999999
Q ss_pred EEcCceeeeecCC-CCCceEEcCC---Cc--EEeecEEEEcCCCCCCchhhcccccccccC-CCCceEeCCCccccCCCC
Q 023957 181 VKLGERVNLDSVS-EGSDTYLTST---GD--TINADCHFLCTGKPVGSDWLKDTILKDSLD-THGMLMVDENLRVKGQKN 253 (275)
Q Consensus 181 i~~~~~v~~i~~~-~~~~~v~~~~---g~--~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~-~~g~i~v~~~~~~~~~~~ 253 (275)
+++++.+.+++.. ++...+.+.+ |+ ++++|.|++|+|++|+.+++.....+++++ ++|++.||++++| +.|+
T Consensus 242 ~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~ 320 (488)
T 3dgz_A 242 FLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPH 320 (488)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTT
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCC
Confidence 9999999999764 3345555543 54 579999999999999998865444555778 7899999999998 8999
Q ss_pred eEEeccccC
Q 023957 254 IFAIGDITD 262 (275)
Q Consensus 254 v~a~Gd~~~ 262 (275)
|||+|||+.
T Consensus 321 IyA~GD~~~ 329 (488)
T 3dgz_A 321 IYAIGDVAE 329 (488)
T ss_dssp EEECGGGBT
T ss_pred EEEeEEecC
Confidence 999999984
No 49
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.98 E-value=1.1e-31 Score=232.38 Aligned_cols=251 Identities=20% Similarity=0.237 Sum_probs=182.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCcccccccccccc-C---Cc------------------c-ccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMV-E---PS------------------F-GKR 65 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~~~~~~~~~~~-~---~~------------------~-~~~ 65 (275)
.++||+|||||+||++||..|+ . +.+|+|||+++.+++....+...+ . .. + ...
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 3589999999999999999886 3 899999999987665332221111 0 00 0 000
Q ss_pred cccccccc----ccccEEEEe-eeeEee--cCeEEecCCeEEeCCEEEEccCCCCCCCchHH----H------------H
Q 023957 66 SVINHTDY----LVNGRIVAS-PAINIT--ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRT----E------------R 122 (275)
Q Consensus 66 ~~~~~~~~----~~~~~~~~~-~~~~~~--~~~v~~~~~~~~~~~~lilatG~~~~~~~~~~----~------------~ 122 (275)
.......+ ..+++++.+ .+..++ .+++.+.++..+.||+|++|||+.|..|+... . .
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~d 169 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGD 169 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHHH
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHHH
Confidence 00000011 125677665 666666 45888888889999999999999987665321 0 1
Q ss_pred ---HHHHh---c------CCcchhhHHHHHhhhC--CCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCcee
Q 023957 123 ---LNQYQ---A------GGPTGVELAGEIAVDF--PEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERV 187 (275)
Q Consensus 123 ---l~~~~---~------~g~~~~~~a~~l~~~~--~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v 187 (275)
+.... + +|.+|+|+|..+.... .+.+++++.+.+.++. .+++.+.+.+.+.+++.||++++++.|
T Consensus 170 ~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V 249 (493)
T 1m6i_A 170 FRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIV 249 (493)
T ss_dssp HHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCE
T ss_pred HHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEE
Confidence 11110 1 8899999999987421 3678999988765543 456678888999999999999999999
Q ss_pred eeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCC-CCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 188 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDT-HGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 188 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~-~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
++++.+++.+.+.+.+|++++||.||+|+|.+|+..+++..++ ++++ +|++.||+++++ .|+|||+|||+..+..
T Consensus 250 ~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl--~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~ 325 (493)
T 1m6i_A 250 QSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGL--EIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDI 325 (493)
T ss_dssp EEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTC--CBCTTTCSEECCTTCEE--ETTEEECGGGEEEEET
T ss_pred EEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCC--ccccCCCcEEECCCccc--CCCeeEeeeeEeccCc
Confidence 9998655556788889999999999999999999888876665 5554 589999999997 5999999999986543
No 50
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.98 E-value=1.4e-31 Score=231.18 Aligned_cols=248 Identities=18% Similarity=0.269 Sum_probs=179.9
Q ss_pred CCeEEEEcCChHHHHHHHHhhc---CCcEEEEcCCCCccccccccccccCCcc--cccccccccccc---cccEEEE-ee
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSF--GKRSVINHTDYL---VNGRIVA-SP 83 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~-~~ 83 (275)
++||+|||||++|+++|..|++ |.+|+|||+++..++....++....... .........+.+ .+++++. ..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 4799999999999999999973 8999999999877644332222211111 111111111111 1566654 45
Q ss_pred eeEeec--CeEEec---CCe--EEeCCEEEEccCCCCCCCchH------------HH---HHHH-Hh--c--------CC
Q 023957 84 AINITE--NEVLTA---EGR--RVVYDYLVIATGHKDPVPKTR------------TE---RLNQ-YQ--A--------GG 130 (275)
Q Consensus 84 ~~~~~~--~~v~~~---~~~--~~~~~~lilatG~~~~~~~~~------------~~---~l~~-~~--~--------~g 130 (275)
+..++. +.+.+. ++. .+.||++|+|||+.|..|.++ .+ .+.. +. . +|
T Consensus 116 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 195 (480)
T 3cgb_A 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGG 195 (480)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCH
T ss_pred EEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCC
Confidence 556653 355443 355 789999999999886544321 11 1222 11 1 78
Q ss_pred cchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeec
Q 023957 131 PTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINAD 210 (275)
Q Consensus 131 ~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d 210 (275)
.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.|++++.++.|++++.+++...+.+. +.++++|
T Consensus 196 ~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D 272 (480)
T 3cgb_A 196 AIGLEMAETFV--ELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKAD 272 (480)
T ss_dssp HHHHHHHHHHH--HTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECS
T ss_pred HHHHHHHHHHH--hcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcC
Confidence 89999999998 46899999999988888888889999999999999999999999999865322234444 4579999
Q ss_pred EEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 211 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 211 ~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
.||+|+|.+|+.++++..++ +++++|++.||++++| +.|+|||+|||+..+..
T Consensus 273 ~vi~a~G~~p~~~~l~~~g~--~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~~ 325 (480)
T 3cgb_A 273 LVLVSVGVKPNTDFLEGTNI--RTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYHV 325 (480)
T ss_dssp EEEECSCEEESCGGGTTSCC--CBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEBT
T ss_pred EEEECcCCCcChHHHHhCCc--ccCCCCCEEECCCccC-CCCCEEEeeeEEEecCC
Confidence 99999999999888876655 6677899999999999 89999999999976653
No 51
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.98 E-value=6.6e-33 Score=239.68 Aligned_cols=250 Identities=17% Similarity=0.216 Sum_probs=180.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccc-------------------cccCCccc--------
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR-------------------AMVEPSFG-------- 63 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~-------------------~~~~~~~~-------- 63 (275)
.++||+|||||++|+++|+.|+ .|++|+|||+++.+|+.+.... ........
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKIN 83 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 3589999999999999999998 6999999999877764432110 00000000
Q ss_pred cccccc------------ccccc--cccEEEEeeeeEeecC--eEEecCC--eE------EeCCEEEEccCCCCC-CCch
Q 023957 64 KRSVIN------------HTDYL--VNGRIVASPAINITEN--EVLTAEG--RR------VVYDYLVIATGHKDP-VPKT 118 (275)
Q Consensus 64 ~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~--~v~~~~~--~~------~~~~~lilatG~~~~-~~~~ 118 (275)
...... ....+ .+++++.+.....+.. .+.+.++ .. +.||++|+|||+.|. +|+.
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~g~ 163 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGI 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCCCC
Confidence 000000 00011 2566666655554444 3444455 45 899999999998753 3322
Q ss_pred H--------HHHHHHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEE
Q 023957 119 R--------TERLNQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDV 181 (275)
Q Consensus 119 ~--------~~~l~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 181 (275)
+ ......+. + +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.||++
T Consensus 164 ~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i 241 (478)
T 1v59_A 164 EIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYS--RLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDF 241 (478)
T ss_dssp CCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHH--HcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEE
Confidence 1 11111111 1 8899999999998 56899999999999888888889999999999999999
Q ss_pred EcCceeeeecC--CCCCceEEcC-----CCcEEeecEEEEcCCCCCCch--hhcccccccccCCCCceEeCCCccccCCC
Q 023957 182 KLGERVNLDSV--SEGSDTYLTS-----TGDTINADCHFLCTGKPVGSD--WLKDTILKDSLDTHGMLMVDENLRVKGQK 252 (275)
Q Consensus 182 ~~~~~v~~i~~--~~~~~~v~~~-----~g~~~~~d~vv~a~G~~~~~~--~~~~~~~~~~~~~~g~i~v~~~~~~~~~~ 252 (275)
+.++.|++++. +++...+.+. +++++++|.||+|+|.+|+.+ +++..++ +++++|+|.||++++| +.|
T Consensus 242 ~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~--~~~~~G~i~vd~~~~t-~~~ 318 (478)
T 1v59_A 242 KLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGL--EVDKRGRLVIDDQFNS-KFP 318 (478)
T ss_dssp ECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTC--CBCTTSCBCCCTTSBC-SST
T ss_pred EeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCc--eeCCCCCEeECcCCcc-CCC
Confidence 99999999986 4444556554 456899999999999999987 5555554 6777899999999998 899
Q ss_pred CeEEeccccCCCCC
Q 023957 253 NIFAIGDITDIRVS 266 (275)
Q Consensus 253 ~v~a~Gd~~~~~~~ 266 (275)
+|||+|||+..+..
T Consensus 319 ~IyA~GD~~~~~~~ 332 (478)
T 1v59_A 319 HIKVVGDVTFGPML 332 (478)
T ss_dssp TEEECGGGSSSCCC
T ss_pred CEEEeeccCCCccc
Confidence 99999999986643
No 52
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.98 E-value=1.5e-32 Score=232.61 Aligned_cols=247 Identities=22% Similarity=0.224 Sum_probs=174.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh---cCCcEEEEcCCCCccccccccccccCCcccccccccccccc-cccEEEEeeeeEee
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL-VNGRIVASPAINIT 88 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~---~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 88 (275)
.++|+|||||+||+++|.+|+ ++.+|+|||+++.+.+.......................+. .+++++.+++..++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id 81 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHDSALGID 81 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEE
Confidence 368999999999999999997 35799999999876544322111111111111111222221 36888999888887
Q ss_pred cC--eEEecCCeEEeCCEEEEccCCCCCCCchH-------------------H----HHHHHHhc--------------C
Q 023957 89 EN--EVLTAEGRRVVYDYLVIATGHKDPVPKTR-------------------T----ERLNQYQA--------------G 129 (275)
Q Consensus 89 ~~--~v~~~~~~~~~~~~lilatG~~~~~~~~~-------------------~----~~l~~~~~--------------~ 129 (275)
.. .+.+.++.++.||+|++|||+.+..+.++ . +.++.+.. +
T Consensus 82 ~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~ 161 (401)
T 3vrd_B 82 PDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRC 161 (401)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBC
T ss_pred ccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEe
Confidence 54 78889999999999999999874432211 1 11222211 1
Q ss_pred Ccc----hhhHHHHHhhhCCCCEEEEEeCCCcccC--cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCC
Q 023957 130 GPT----GVELAGEIAVDFPEKKVTLVHKGSRLLE--FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST 203 (275)
Q Consensus 130 g~~----~~~~a~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~ 203 (275)
+.. +++++..+.......+++++...+.+.. .+++.+.+.+.+.+++.|++++.++.+..++.+.+...+.+++
T Consensus 162 ~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~ 241 (401)
T 3vrd_B 162 PPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSF 241 (401)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETT
T ss_pred ehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCC
Confidence 112 2355555555566789999988876532 3334444455555678899999999999998877788899999
Q ss_pred CcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCC-ccccCCCCeEEeccccCC
Q 023957 204 GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITDI 263 (275)
Q Consensus 204 g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~-~~~~~~~~v~a~Gd~~~~ 263 (275)
|+++++|.+++++|.+|+ .++...++ .+++|++.||++ +|++++|+|||+|||++.
T Consensus 242 g~~i~~D~vi~~~g~~~~-~~~~~~gl---~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~ 298 (401)
T 3vrd_B 242 GETFKAAVINLIPPQRAG-KIAQSASL---TNDSGWCPVDIRTFESSLQPGIHVIGDACNA 298 (401)
T ss_dssp SCEEECSEEEECCCEEEC-HHHHHTTC---CCTTSSBCBCTTTCBBSSSTTEEECGGGBCC
T ss_pred CcEEEeeEEEEecCcCCc-hhHhhccc---cccCCCEEECCCcceecCCCCEEEecccccC
Confidence 999999999999999985 67777765 467899999987 777799999999999864
No 53
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.98 E-value=4.3e-31 Score=226.40 Aligned_cols=245 Identities=22% Similarity=0.326 Sum_probs=176.9
Q ss_pred CeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCccccccccccccCCcc--cccccccccccc--cccEEE-Eeeee
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSF--GKRSVINHTDYL--VNGRIV-ASPAI 85 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~-~~~~~ 85 (275)
+||+|||||++|+++|..|+ . |.+|+|||+++..++....+........ .........+++ .++++. ...+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 48999999999999999997 3 8999999999877654332221111111 111111111111 156663 34444
Q ss_pred Eee--cCeEEecC---Ce--EEeCCEEEEccCCCCCCCchH------------HHH---HH-HHh--c--------CCcc
Q 023957 86 NIT--ENEVLTAE---GR--RVVYDYLVIATGHKDPVPKTR------------TER---LN-QYQ--A--------GGPT 132 (275)
Q Consensus 86 ~~~--~~~v~~~~---~~--~~~~~~lilatG~~~~~~~~~------------~~~---l~-~~~--~--------~g~~ 132 (275)
.++ .+.+.+.+ +. ++.||++++|||+.|..|.++ .+. +. .+. . +|.+
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~ 160 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYI 160 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHH
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHH
Confidence 554 34555532 54 489999999999886554321 111 21 111 1 8889
Q ss_pred hhhHHHHHhhhCCCCEEEEEeCCCcccC-cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecE
Q 023957 133 GVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADC 211 (275)
Q Consensus 133 ~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~ 211 (275)
|+++|..+. ..+.+++++++.+.+++ .+++++.+.+.+.+++.|+++++++.|++++.+++...+.+ +++++++|.
T Consensus 161 g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~ 237 (447)
T 1nhp_A 161 GIEAAEAFA--KAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADL 237 (447)
T ss_dssp HHHHHHHHH--HTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSE
T ss_pred HHHHHHHHH--HCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCE
Confidence 999999998 46889999999988877 57888999999999999999999999999986533324555 567899999
Q ss_pred EEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 212 HFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 212 vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
||+|+|.+|+.++++.. + +++.+|++.||++++| +.|+|||+|||+..+.
T Consensus 238 vi~a~G~~p~~~~~~~~-~--~~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~ 287 (447)
T 1nhp_A 238 VVVAVGVRPNTAWLKGT-L--ELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKY 287 (447)
T ss_dssp EEECSCEEESCGGGTTT-S--CBCTTSCBCCCTTCBC-SSTTEEECGGGSCEEE
T ss_pred EEECcCCCCChHHHHhh-h--hhcCCCcEEECccccC-CCCCEEEeeeEEEeec
Confidence 99999999998887654 3 6677899999999999 8999999999997653
No 54
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.98 E-value=1.8e-31 Score=218.63 Aligned_cols=244 Identities=18% Similarity=0.200 Sum_probs=160.8
Q ss_pred cCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccc-cccc--ccC--Ccccc-----cccccccccc--cc
Q 023957 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA-SLRA--MVE--PSFGK-----RSVINHTDYL--VN 76 (275)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~-~~~~--~~~--~~~~~-----~~~~~~~~~~--~~ 76 (275)
|+..|||+||||||||++||.+|+ .|++|+|||++...+.... .++. .+. +.+.. +......+.. .+
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~ 80 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYG 80 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcC
Confidence 345699999999999999999998 6999999999875442221 1110 000 00000 0000000000 12
Q ss_pred cEEEEeeeeEeec----CeEEecCCeEEeCCEEEEccCCCCCCCchHHHHH------------HHHh---c--------C
Q 023957 77 GRIVASPAINITE----NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL------------NQYQ---A--------G 129 (275)
Q Consensus 77 ~~~~~~~~~~~~~----~~v~~~~~~~~~~~~lilatG~~~~~~~~~~~~l------------~~~~---~--------~ 129 (275)
..+....+..... ..+.+.++..+.|+++++|||+.|..|.++.... .... . +
T Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGg 160 (314)
T 4a5l_A 81 TTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGG 160 (314)
T ss_dssp CEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECS
T ss_pred cEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECC
Confidence 3333333333322 1566778889999999999999866554331111 1100 0 8
Q ss_pred CcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc---eEE---cCC
Q 023957 130 GPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD---TYL---TST 203 (275)
Q Consensus 130 g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~---~v~---~~~ 203 (275)
|.+|+|+|..+. ..+.+|+++++...... ......+.....+++.+....+.++...+... .+. ..+
T Consensus 161 G~ig~e~A~~l~--~~G~~Vt~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 233 (314)
T 4a5l_A 161 GDAAMEEALHLT--KYGSKVIILHRRDAFRA-----SKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGE 233 (314)
T ss_dssp SHHHHHHHHHHT--TTSSEEEEECSSSSCCS-----CHHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCC
T ss_pred ChHHHHHHHHHH--HhCCeeeeecccccccc-----cchhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeeccccc
Confidence 999999999998 67999999998765422 12233444556688888888888876554322 222 245
Q ss_pred CcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 204 GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 204 g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
++++++|.|++++|.+|+.+++... +.++++|++ ||+++|| |.|+|||+|||++.|.
T Consensus 234 ~~~i~~d~vi~a~G~~pn~~~l~~~---~~~~~~G~i-v~~~~~T-s~pgIyA~GDv~~~~~ 290 (314)
T 4a5l_A 234 YKVVPVAGLFYAIGHSPNSKFLGGQ---VKTADDGYI-LTEGPKT-SVDGVFACGDVCDRVY 290 (314)
T ss_dssp EEEEECSEEEECSCEEESCGGGTTS---SCBCTTSCB-CCBTTBC-SSTTEEECSTTTCSSC
T ss_pred ceeeccccceEecccccChhHhccc---ceEcCCeeE-eCCCCcc-CCCCEEEEEeccCCcc
Confidence 5689999999999999999888643 356777866 8889998 9999999999998764
No 55
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.98 E-value=4e-32 Score=233.26 Aligned_cols=246 Identities=17% Similarity=0.209 Sum_probs=179.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc---cc---------------ccC---Ccc-------c
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL---RA---------------MVE---PSF-------G 63 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~---~~---------------~~~---~~~-------~ 63 (275)
++||+|||||++|++||..|+ .|++|+|||+ +.+|+.|... +. ... ... .
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 489999999999999999998 6999999999 4555332210 00 000 000 0
Q ss_pred ccccccc------------cccc--cccEEEEeeeeEeecCeEEecCCeEEeCCEEEEccCCCCCCCc-hH-------HH
Q 023957 64 KRSVINH------------TDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPK-TR-------TE 121 (275)
Q Consensus 64 ~~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~lilatG~~~~~~~-~~-------~~ 121 (275)
...+..+ ..++ .+++++.+....++.+++.+.+ ..+.||++|+|||+.|..|+ ++ ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~~~~v~~~~ 162 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSSSVELPMLPLGGPVISST 162 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEEECCBTTBCCBTTEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCccCcEecHH
Confidence 0000000 0111 2567777776666777777765 78999999999999876553 21 11
Q ss_pred HHHHHh---c------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecC
Q 023957 122 RLNQYQ---A------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSV 192 (275)
Q Consensus 122 ~l~~~~---~------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 192 (275)
....+. + +|.+|+|+|..+. ..+.+++++++.+.+++.+++++.+.+.+.+++.||+++++++|++++.
T Consensus 163 ~~~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 240 (458)
T 1lvl_A 163 EALAPKALPQHLVVVGGGYIGLELGIAYR--KLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN 240 (458)
T ss_dssp HHTCCSSCCSEEEEECCSHHHHHHHHHHH--HHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET
T ss_pred HHhhhhccCCeEEEECcCHHHHHHHHHHH--HCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe
Confidence 111111 1 8899999999998 4588999999999988888888999999999999999999999999986
Q ss_pred CCCCceEEcCCC--cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 193 SEGSDTYLTSTG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 193 ~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
++ +.+...+| +++++|.||+|+|.+|+.+++.....+++++++ ++.||++++| +.|+|||+|||+..+..
T Consensus 241 -~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~~~~ 312 (458)
T 1lvl_A 241 -GC-LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGEPML 312 (458)
T ss_dssp -TE-EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCSSCC
T ss_pred -CC-EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCCccc
Confidence 43 55554456 689999999999999998764222333456666 9999999998 89999999999986643
No 56
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=1.2e-31 Score=220.35 Aligned_cols=240 Identities=17% Similarity=0.173 Sum_probs=168.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccC-Ccccc---ccc-ccccccc--cccEEEEee
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVE-PSFGK---RSV-INHTDYL--VNGRIVASP 83 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~-~~~~~---~~~-~~~~~~~--~~~~~~~~~ 83 (275)
+++||+|||||++|+++|++|+ .|++|+|||++ .|..|........ +.+.. ..+ ....++. .++++....
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 91 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDI 91 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEESC
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEEE
Confidence 3589999999999999999998 69999999998 4443332111000 10100 000 0111111 145555566
Q ss_pred eeEeecC----eEEecCCeEEeCCEEEEccCCCCCCCchHH------------HHHH--HHhc-------CCcchhhHHH
Q 023957 84 AINITEN----EVLTAEGRRVVYDYLVIATGHKDPVPKTRT------------ERLN--QYQA-------GGPTGVELAG 138 (275)
Q Consensus 84 ~~~~~~~----~v~~~~~~~~~~~~lilatG~~~~~~~~~~------------~~l~--~~~~-------~g~~~~~~a~ 138 (275)
+..++.. .+.+.++..+.||++|+|||+.|..|.++. .... .+.. +|.+++++|.
T Consensus 92 v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~ 171 (323)
T 3f8d_A 92 VEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAE 171 (323)
T ss_dssp EEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHH
T ss_pred EEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHH
Confidence 6666543 577777789999999999999865543221 0111 0111 7889999999
Q ss_pred HHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHH-hCCCEEEcCceeeeecCCCCCceEEcCC---Cc--EEeecEE
Q 023957 139 EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLI-SKKVDVKLGERVNLDSVSEGSDTYLTST---GD--TINADCH 212 (275)
Q Consensus 139 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~i~~~~~v~~i~~~~~~~~v~~~~---g~--~~~~d~v 212 (275)
.+.. .+.+++++.+.+.+.. . ..+.+.+. +.||+++.++.+.+++.+++...+.+.+ |+ ++++|.|
T Consensus 172 ~l~~--~g~~v~~~~~~~~~~~--~----~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~v 243 (323)
T 3f8d_A 172 ILSS--YSTKVYLIHRRDTFKA--Q----PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGV 243 (323)
T ss_dssp HHHH--HSSEEEEECSSSSCCS--C----HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEE
T ss_pred HHHH--hCCeEEEEEeCCCCCc--C----HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEE
Confidence 9984 4889999999887654 1 22333344 4599999999999998765444566554 76 7999999
Q ss_pred EEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCC
Q 023957 213 FLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 213 v~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~ 264 (275)
|+++|+.|+.++++..++ +++++|++.||++++| +.|+||++|||+..+
T Consensus 244 v~a~G~~p~~~~~~~~g~--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 292 (323)
T 3f8d_A 244 FIEIGFDPPTDFAKSNGI--ETDTNGYIKVDEWMRT-SVPGVFAAGDCTSAW 292 (323)
T ss_dssp EECCCEECCHHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBSTT
T ss_pred EEEECCCCChhHHhhcCe--eecCCCcEecCCCcee-cCCCEEEcceecCCC
Confidence 999999999888877665 6788999999999998 899999999999864
No 57
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.97 E-value=1.5e-31 Score=220.29 Aligned_cols=240 Identities=18% Similarity=0.210 Sum_probs=166.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccC-Cccc----ccccc-cccccc--cccEEEEe
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVE-PSFG----KRSVI-NHTDYL--VNGRIVAS 82 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~-~~~~----~~~~~-~~~~~~--~~~~~~~~ 82 (275)
.++||+|||||++|+++|+.|+ .|++|+|||++ .+|..+........ +.+. ...+. ...+.. .++++...
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~ 85 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMD 85 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEee
Confidence 3589999999999999999998 69999999998 45544332111000 0010 00000 011111 14566666
Q ss_pred eeeEeecC-------eEEecCCeEEeCCEEEEccCCCCCCCchHH------------HHHHHHh---------cCCcchh
Q 023957 83 PAINITEN-------EVLTAEGRRVVYDYLVIATGHKDPVPKTRT------------ERLNQYQ---------AGGPTGV 134 (275)
Q Consensus 83 ~~~~~~~~-------~v~~~~~~~~~~~~lilatG~~~~~~~~~~------------~~l~~~~---------~~g~~~~ 134 (275)
.+..++.. .+.+.++..+.||++|+|||+.|..|.++. ....... .+|.+++
T Consensus 86 ~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~ 165 (325)
T 2q7v_A 86 EVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAV 165 (325)
T ss_dssp CEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHH
T ss_pred eEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHH
Confidence 66655422 456667788999999999998755443211 1111111 1788999
Q ss_pred hHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHH-hCCCEEEcCceeeeecCCCCCceEEcC---CCc--EEe
Q 023957 135 ELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLI-SKKVDVKLGERVNLDSVSEGSDTYLTS---TGD--TIN 208 (275)
Q Consensus 135 ~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~i~~~~~v~~i~~~~~~~~v~~~---~g~--~~~ 208 (275)
|+|..+. ..+.+++++.+.+.+.. ...+.+.+. +.||+++++++++++..+++...+.+. +|+ +++
T Consensus 166 e~A~~l~--~~g~~Vtlv~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~ 237 (325)
T 2q7v_A 166 EEGMFLT--KFADEVTVIHRRDTLRA------NKVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELA 237 (325)
T ss_dssp HHHHHHT--TTCSEEEEECSSSSCCS------CHHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEE
T ss_pred HHHHHHH--hcCCEEEEEeCCCcCCc------chHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEE
Confidence 9999998 56899999998876532 233344444 469999999999999865433345553 665 789
Q ss_pred ecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCC
Q 023957 209 ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 209 ~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~ 264 (275)
+|.||+|+|++|+.+++... ++++++|++.||++++| +.|+|||+|||+..+
T Consensus 238 ~D~vi~a~G~~p~~~~l~~~---~~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 289 (325)
T 2q7v_A 238 TDGVFIFIGHVPNTAFVKDT---VSLRDDGYVDVRDEIYT-NIPMLFAAGDVSDYI 289 (325)
T ss_dssp CSEEEECSCEEESCGGGTTT---SCBCTTSCBCCBTTTBC-SSTTEEECSTTTCSS
T ss_pred cCEEEEccCCCCChHHHhhh---cccCCCccEecCCCCcc-CCCCEEEeecccCcc
Confidence 99999999999998888754 36678899999999998 899999999999864
No 58
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=1.1e-31 Score=222.02 Aligned_cols=248 Identities=17% Similarity=0.177 Sum_probs=172.3
Q ss_pred cCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccc-cc--c-CCccc----ccccccccccc--cccE
Q 023957 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR-AM--V-EPSFG----KRSVINHTDYL--VNGR 78 (275)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~-~~--~-~~~~~----~~~~~~~~~~~--~~~~ 78 (275)
|..++||+|||||++|+++|+.|+ +|++|+|||+++.+++.|.... .. . .+.+. ........+.. .++.
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 81 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPV 81 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCE
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 344689999999999999999998 6999999999988876553211 00 0 00000 00000001111 1334
Q ss_pred EE-EeeeeEeecC----eEEecCCeEEeCCEEEEccCCC---CCCCchHHH-------------HHHHHhc-------CC
Q 023957 79 IV-ASPAINITEN----EVLTAEGRRVVYDYLVIATGHK---DPVPKTRTE-------------RLNQYQA-------GG 130 (275)
Q Consensus 79 ~~-~~~~~~~~~~----~v~~~~~~~~~~~~lilatG~~---~~~~~~~~~-------------~l~~~~~-------~g 130 (275)
+. ...+..++.. .+.+.++..+.||++|+|||.. |..|.++.. ..+.+.. +|
T Consensus 82 ~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~v~viG~G 161 (335)
T 2zbw_A 82 YSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGG 161 (335)
T ss_dssp EEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCGGGGTTCEEEEECSS
T ss_pred EEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCchhhcCCCEEEEECCC
Confidence 43 3344444321 4666677789999999999983 443332100 0111111 78
Q ss_pred cchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcC---CC--c
Q 023957 131 PTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTS---TG--D 205 (275)
Q Consensus 131 ~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~---~g--~ 205 (275)
.+++|+|..+. ..+.+++++.+.+.+.. .+...+.+.+.+++.|++++.++.|.+++.+++...+.+. +| +
T Consensus 162 ~~g~e~a~~l~--~~g~~V~~v~~~~~~~~--~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~ 237 (335)
T 2zbw_A 162 DSAVDWALNLL--DTARRITLIHRRPQFRA--HEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEEL 237 (335)
T ss_dssp HHHHHHHHHTT--TTSSEEEEECSSSSCCS--CHHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEE
T ss_pred HHHHHHHHHHH--hhCCEEEEEEcCCccCc--cHHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceE
Confidence 89999999998 56889999999887643 2456777888888899999999999999875433345554 66 5
Q ss_pred EEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 206 TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 206 ~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
++++|.||+|+|++|+.+++...++ +++ +|++.||++++| +.|+|||+|||+..+.
T Consensus 238 ~i~~D~vi~a~G~~p~~~~l~~~~~--~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~ 293 (335)
T 2zbw_A 238 ALEVDAVLILAGYITKLGPLANWGL--ALE-KNKIKVDTTMAT-SIPGVYACGDIVTYPG 293 (335)
T ss_dssp EEECSEEEECCCEEEECGGGGGSCC--CEE-TTEEECCTTCBC-SSTTEEECSTTEECTT
T ss_pred EEecCEEEEeecCCCCchHhhhcce--ecc-CCeeeeCCCCCC-CCCCEEEeccccccCc
Confidence 7999999999999998888877655 444 689999999998 8999999999997654
No 59
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.97 E-value=3.4e-31 Score=219.12 Aligned_cols=241 Identities=15% Similarity=0.143 Sum_probs=166.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC----CccccccccccccC-Ccccc-----cccccccccc--ccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE----YFEITWASLRAMVE-PSFGK-----RSVINHTDYL--VNG 77 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~----~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~--~~~ 77 (275)
.+++||+|||||++||++|+.|+ .|++|+|||+++ ..|+.|........ +.+.. ........+. .++
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 99 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGT 99 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCC
Confidence 45689999999999999999998 699999999955 44443332111100 01110 0000111111 156
Q ss_pred EEEEeeeeEeecC----eEEe---cCCeEEeCCEEEEccCCCCCCCchHHHH------------HHHH----hc------
Q 023957 78 RIVASPAINITEN----EVLT---AEGRRVVYDYLVIATGHKDPVPKTRTER------------LNQY----QA------ 128 (275)
Q Consensus 78 ~~~~~~~~~~~~~----~v~~---~~~~~~~~~~lilatG~~~~~~~~~~~~------------l~~~----~~------ 128 (275)
++....+..++.. .+.+ .++..+.||++|+|+|+.|..|.++... .... ..
T Consensus 100 ~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vv 179 (338)
T 3itj_A 100 EIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVI 179 (338)
T ss_dssp EEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEE
T ss_pred EEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEE
Confidence 6666666666543 3333 3567889999999999886554432111 1111 11
Q ss_pred -CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhC-CCEEEcCceeeeecCCCCCce-EEcCC--
Q 023957 129 -GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISK-KVDVKLGERVNLDSVSEGSDT-YLTST-- 203 (275)
Q Consensus 129 -~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~~~-v~~~~-- 203 (275)
+|.+++++|..+. ..+.+++++.+.+.+.. .+.+.+.+.+. ||+++.++.|.+++.+++... +.+.+
T Consensus 180 G~G~~g~e~a~~l~--~~g~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~ 251 (338)
T 3itj_A 180 GGGDSACEEAQFLT--KYGSKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTK 251 (338)
T ss_dssp CSSHHHHHHHHHHT--TTSSEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETT
T ss_pred CCCHHHHHHHHHHH--hcCCEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECC
Confidence 7889999999998 56899999999887543 34455556555 999999999999987665433 55544
Q ss_pred ---CcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEe-CCCccccCCCCeEEeccccCC
Q 023957 204 ---GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMV-DENLRVKGQKNIFAIGDITDI 263 (275)
Q Consensus 204 ---g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v-~~~~~~~~~~~v~a~Gd~~~~ 263 (275)
++++++|.||+|+|+.|+..++.. + ++++++|++.+ |..+++ +.|+|||+|||+..
T Consensus 252 ~g~~~~i~~D~vi~a~G~~p~~~~~~~-~--l~~~~~G~i~v~~~~~~t-~~~~vya~GD~~~~ 311 (338)
T 3itj_A 252 KNEETDLPVSGLFYAIGHTPATKIVAG-Q--VDTDEAGYIKTVPGSSLT-SVPGFFAAGDVQDS 311 (338)
T ss_dssp TTEEEEEECSEEEECSCEEECCGGGBT-T--BCBCTTSCBCCCTTSSBC-SSTTEEECGGGGCS
T ss_pred CCceEEEEeCEEEEEeCCCCChhHhhC-c--eEecCCCcEEEcCccccc-CCCCEEEeeccCCC
Confidence 457999999999999999888765 4 47788999995 778888 89999999999974
No 60
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.97 E-value=2.6e-31 Score=217.64 Aligned_cols=245 Identities=17% Similarity=0.131 Sum_probs=157.4
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccc--ccccccccCCccc--ccccccccccc--cccEEEE
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT--WASLRAMVEPSFG--KRSVINHTDYL--VNGRIVA 81 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~ 81 (275)
|+++.|||+||||||||++||.+|+ .|++|+|||++...|.. +............ .+......... ....+..
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQY 81 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccc
Confidence 5556799999999999999999998 69999999997643321 1111111000000 00000000000 0112222
Q ss_pred eeee-Ee--ecCeEEecCCeEEeCCEEEEccCCCCCCCchHHH------------HHHHH--h-c------CCcchhhHH
Q 023957 82 SPAI-NI--TENEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE------------RLNQY--Q-A------GGPTGVELA 137 (275)
Q Consensus 82 ~~~~-~~--~~~~v~~~~~~~~~~~~lilatG~~~~~~~~~~~------------~l~~~--~-~------~g~~~~~~a 137 (275)
.... .. ........++.++.||++++|||+.|..|+++.. ..... . + +|++|+|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A 161 (312)
T 4gcm_A 82 GDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEG 161 (312)
T ss_dssp CCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHH
T ss_pred eeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHH
Confidence 1111 11 1225556677899999999999998655443210 11111 1 1 889999999
Q ss_pred HHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCce----EEc--CCCcEEeecE
Q 023957 138 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT----YLT--STGDTINADC 211 (275)
Q Consensus 138 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~----v~~--~~g~~~~~d~ 211 (275)
..+. ..+.+|+++++.+.+.+. .......++..++.......+..+...+.... ... .++..+++|.
T Consensus 162 ~~l~--~~g~~Vtlv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (312)
T 4gcm_A 162 TFLT--KFADKVTIVHRRDELRAQ-----RILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADG 234 (312)
T ss_dssp HHHT--TTCSEEEEECSSSSCCSC-----HHHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSE
T ss_pred HHHH--hcCCEEEEEecccccCcc-----hhHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeee
Confidence 9998 679999999998876542 12233456667888887777666654433221 122 2345799999
Q ss_pred EEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCC
Q 023957 212 HFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 212 vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~ 264 (275)
|++++|..|+..++...++ .+++|+|.||+++|| |.|+|||+|||+..+
T Consensus 235 v~~~~g~~~~~~~~~~~g~---~~~~G~I~vd~~~~T-s~pgIyA~GDv~~~~ 283 (312)
T 4gcm_A 235 VFIYIGMKPLTAPFKDLGI---TNDVGYIVTKDDMTT-SVPGIFAAGDVRDKG 283 (312)
T ss_dssp EEECSCEEESCGGGGGGTC---BCTTSCBCCCTTSBC-SSTTEEECSTTBSCS
T ss_pred EEeecCCCcCchhHHhcce---ecCCCeEeeCCCCcc-CCCCEEEEeecCCCc
Confidence 9999999999888877664 456899999999999 999999999999744
No 61
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=1.9e-30 Score=220.05 Aligned_cols=246 Identities=18% Similarity=0.216 Sum_probs=174.6
Q ss_pred CeEEEEcCChHHHHHHHHhh----cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEEeeeeEe
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ----FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASPAINI 87 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~----~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (275)
+||+|||||++|+++|..|+ +|++|+|||+++.+++...............+......+.+ .+++++..++..+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 68999999999999999986 48999999999976654322111111111111112222222 2677777788777
Q ss_pred ecC--eEEecCCe----EEeCCEEEEccCCCCCCC---chHH-----------HHHHH----Hhc------CC-------
Q 023957 88 TEN--EVLTAEGR----RVVYDYLVIATGHKDPVP---KTRT-----------ERLNQ----YQA------GG------- 130 (275)
Q Consensus 88 ~~~--~v~~~~~~----~~~~~~lilatG~~~~~~---~~~~-----------~~l~~----~~~------~g------- 130 (275)
+.. .+.+.++. ++.||+||+|||..|..| +... ..+.. +.. +|
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~ 161 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHN 161 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCS
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCC
Confidence 654 67766654 389999999999986644 3221 11111 111 33
Q ss_pred ------------c------chhhHHHHHhhh--CCC----CEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCce
Q 023957 131 ------------P------TGVELAGEIAVD--FPE----KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 186 (275)
Q Consensus 131 ------------~------~~~~~a~~l~~~--~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~ 186 (275)
. .++|.|..+... ..+ .+++++++.+ .++.+++.+.+.+.+.+++.||+++.++.
T Consensus 162 ~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~ 240 (409)
T 3h8l_A 162 PKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFK 240 (409)
T ss_dssp SCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCC
T ss_pred ccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCc
Confidence 1 256777544321 334 4899999988 66677788899999999999999999999
Q ss_pred eeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCC
Q 023957 187 VNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 187 v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
|++++.++ +++++|+++++|.||+++|+.|+ .++...+.++ .+++|++.||+.++++++|+||++|||+..+.+
T Consensus 241 v~~i~~~~----v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~ 314 (409)
T 3h8l_A 241 IKEIREHE----IVDEKGNTIPADITILLPPYTGN-PALKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVP 314 (409)
T ss_dssp EEEECSSE----EEETTSCEEECSEEEEECCEECC-HHHHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCS
T ss_pred eEEECCCe----EEECCCCEEeeeEEEECCCCCcc-HHHHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCC
Confidence 99997542 77889999999999999999986 5666663333 467899999999999889999999999986443
No 62
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.97 E-value=6.2e-31 Score=215.47 Aligned_cols=242 Identities=16% Similarity=0.148 Sum_probs=165.0
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEE-EcCCCCccccccccccccC-Cccc-----ccccccccccc--cccEEEE
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTL-IDPKEYFEITWASLRAMVE-PSFG-----KRSVINHTDYL--VNGRIVA 81 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~v-ie~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~--~~~~~~~ 81 (275)
.++||+|||||++||++|+.|+ .|++|+| +|| +.+|+.+........ +.+. .........+. .++++..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEM 81 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEE
Confidence 4689999999999999999998 6999999 999 445544332211100 0110 01111111111 1456665
Q ss_pred eeeeEe-ec--C--eE-EecCCeEEeCCEEEEccCCCCCCCchHH------------HHHHHHhc---------CCcchh
Q 023957 82 SPAINI-TE--N--EV-LTAEGRRVVYDYLVIATGHKDPVPKTRT------------ERLNQYQA---------GGPTGV 134 (275)
Q Consensus 82 ~~~~~~-~~--~--~v-~~~~~~~~~~~~lilatG~~~~~~~~~~------------~~l~~~~~---------~g~~~~ 134 (275)
.++..+ +. . .+ ...++ .+.||++|+|||+.|..|.++. ........ +|.+++
T Consensus 82 ~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~ 160 (315)
T 3r9u_A 82 VGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTAL 160 (315)
T ss_dssp CCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHH
T ss_pred EEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHH
Confidence 566665 33 2 21 22233 8899999999998765543211 11111111 788999
Q ss_pred hHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEc--CCCc--EEee
Q 023957 135 ELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLT--STGD--TINA 209 (275)
Q Consensus 135 ~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~--~~g~--~~~~ 209 (275)
++|..+. ..+.+++++.+.+.+.. ..+.+.+.+++.|+++++++.+.++..+++.. .+++ .+|+ ++++
T Consensus 161 e~a~~l~--~~g~~v~~~~~~~~~~~-----~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~ 233 (315)
T 3r9u_A 161 EEALYLA--NICSKIYLIHRRDEFRA-----APSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNV 233 (315)
T ss_dssp HHHHHHH--TTSSEEEEECSSSSCBS-----CHHHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECC
T ss_pred HHHHHHH--hhCCEEEEEEeCCCCCC-----CHHHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeec
Confidence 9999998 56899999999887521 22334455578899999999999998765332 2443 4775 7999
Q ss_pred cEEEEcCCCCCCchhhcc-cccc-cccCCCCceEeCCCccccCCCCeEEeccccCC
Q 023957 210 DCHFLCTGKPVGSDWLKD-TILK-DSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 263 (275)
Q Consensus 210 d~vv~a~G~~~~~~~~~~-~~~~-~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~ 263 (275)
|.||+|+|+.|+..++.. ..++ ++++++|++.||++++| +.|+|||+|||+..
T Consensus 234 D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~~~~ 288 (315)
T 3r9u_A 234 PGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQT-SVAGLFAAGDLRKD 288 (315)
T ss_dssp SCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECGGGBTT
T ss_pred CeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCccc-CCCCEEEeecccCC
Confidence 999999999999888776 2233 57788899999999999 89999999999864
No 63
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.97 E-value=1.1e-30 Score=214.46 Aligned_cols=242 Identities=16% Similarity=0.176 Sum_probs=169.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccccccc-CCccc----ccccc-cccccc--cccEEEEee
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV-EPSFG----KRSVI-NHTDYL--VNGRIVASP 83 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~-~~~~~----~~~~~-~~~~~~--~~~~~~~~~ 83 (275)
++||+|||||++|+++|+.|+ .|++|+|||+.. .+..+....... .+.+. ...+. ....+. .++++....
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 489999999999999999998 699999999763 333222111000 00110 00000 001111 145666666
Q ss_pred eeEeecC--eEE-ecCCeEEeCCEEEEccCCCCCCCchHHHHH------------HHHhc---------CCcchhhHHHH
Q 023957 84 AINITEN--EVL-TAEGRRVVYDYLVIATGHKDPVPKTRTERL------------NQYQA---------GGPTGVELAGE 139 (275)
Q Consensus 84 ~~~~~~~--~v~-~~~~~~~~~~~lilatG~~~~~~~~~~~~l------------~~~~~---------~g~~~~~~a~~ 139 (275)
+..++.. .+. +.++..+.||++++|||+.|..|.++.... ..... +|.+++|+|..
T Consensus 84 v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~ 163 (320)
T 1trb_A 84 INKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALY 163 (320)
T ss_dssp EEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHH
T ss_pred eeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHH
Confidence 6666532 222 556778999999999999877665532211 11000 78899999999
Q ss_pred HhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEcCC----C--cEEeecEE
Q 023957 140 IAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTST----G--DTINADCH 212 (275)
Q Consensus 140 l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~----g--~~~~~d~v 212 (275)
+. ..+.+++++.+.+.+. ..+.+.+.+.+.+++.||+++++++|++++.+++.+ .+.+.+ | +++++|.|
T Consensus 164 l~--~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~v 239 (320)
T 1trb_A 164 LS--NIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239 (320)
T ss_dssp HT--TTSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEE
T ss_pred HH--hcCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEE
Confidence 98 5689999999887653 245567778888888999999999999998665443 255443 4 57999999
Q ss_pred EEcCCCCCCchhhcccccccccCCCCceEeCCCc-----cccCCCCeEEeccccCCC
Q 023957 213 FLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENL-----RVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 213 v~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~-----~~~~~~~v~a~Gd~~~~~ 264 (275)
|+|+|++|+.+++. .++ +++ +|++.||+++ +| +.|+||++|||+..+
T Consensus 240 v~a~G~~p~~~~~~-~~l--~~~-~G~i~vd~~~~~~~~~t-~~~~vya~GD~~~~~ 291 (320)
T 1trb_A 240 FVAIGHSPNTAIFE-GQL--ELE-NGYIKVQSGIHGNATQT-SIPGVFAAGDVMDHI 291 (320)
T ss_dssp EECSCEEESCGGGT-TTS--CEE-TTEECCCCSSSSCTTBC-SSTTEEECGGGGCSS
T ss_pred EEEeCCCCChHHhc-ccc--ccc-CceEEECCCcccccccC-CCCCEEEcccccCCc
Confidence 99999999988876 333 566 8999999996 66 899999999999875
No 64
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.97 E-value=1.8e-30 Score=212.52 Aligned_cols=241 Identities=19% Similarity=0.189 Sum_probs=165.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCcccccccccccc-CCcc----cccccc-cccccc--cccEEEEe
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWASLRAMV-EPSF----GKRSVI-NHTDYL--VNGRIVAS 82 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~~~~~~~~~~~~~-~~~~----~~~~~~-~~~~~~--~~~~~~~~ 82 (275)
++||+|||||++|+++|+.|+ .|+ +|+|||++. .|..+....... .+.+ ....+. ...+.. .++++...
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 79 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMT 79 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECS
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 379999999999999999998 699 999999964 333222111000 0000 000000 011111 14556555
Q ss_pred eeeEee--cC--eEEecCCeEEeCCEEEEccCCCCCCCchHHH------------HHHHHhc---------CCcchhhHH
Q 023957 83 PAINIT--EN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRTE------------RLNQYQA---------GGPTGVELA 137 (275)
Q Consensus 83 ~~~~~~--~~--~v~~~~~~~~~~~~lilatG~~~~~~~~~~~------------~l~~~~~---------~g~~~~~~a 137 (275)
++..++ .. .+.+.++..+.||++|+|||+.|..|.++.. ....... +|.+++|+|
T Consensus 80 ~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A 159 (311)
T 2q0l_A 80 AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEA 159 (311)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHH
T ss_pred EEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHH
Confidence 555554 23 5666777789999999999988665543211 1111110 788999999
Q ss_pred HHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHH-hCCCEEEcCceeeeecCCCCCc-eEEcC---CCc--EEeec
Q 023957 138 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLI-SKKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--TINAD 210 (275)
Q Consensus 138 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~~~~d 210 (275)
..+. ..+.+++++.+.+.+. . ...+.+.+. +.||++++++.++++..+++.+ .+.+. +|+ ++++|
T Consensus 160 ~~l~--~~g~~Vtlv~~~~~~~--~----~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D 231 (311)
T 2q0l_A 160 IYLA--NICKKVYLIHRRDGFR--C----APITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVP 231 (311)
T ss_dssp HHHH--TTSSEEEEECSSSSCC--S----CHHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECS
T ss_pred HHHH--hcCCEEEEEeeCCccC--C----CHHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecC
Confidence 9998 5689999999887652 2 233444554 4799999999999998654432 35544 665 78999
Q ss_pred EEEEcCCCCCCchhhcccc--cccccCCCCceEeCCCccccCCCCeEEeccccCC
Q 023957 211 CHFLCTGKPVGSDWLKDTI--LKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 263 (275)
Q Consensus 211 ~vv~a~G~~~~~~~~~~~~--~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~ 263 (275)
.||+|+|++|+.+++...+ .+++++++|++.||++++| +.|+|||+|||+..
T Consensus 232 ~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~ 285 (311)
T 2q0l_A 232 GFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKT-NVQGLFAAGDIRIF 285 (311)
T ss_dssp EEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECSTTBTT
T ss_pred EEEEEecCccChhhhhcccccceeEeccCCCEEeCCcccc-CCCCeEEcccccCc
Confidence 9999999999988887654 1246778899999999998 89999999999986
No 65
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.97 E-value=1.7e-30 Score=213.45 Aligned_cols=241 Identities=19% Similarity=0.211 Sum_probs=165.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccC-Ccc---cccccc-cccccc--cccEEEEe
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVE-PSF---GKRSVI-NHTDYL--VNGRIVAS 82 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~-~~~---~~~~~~-~~~~~~--~~~~~~~~ 82 (275)
.+++||+|||||++|+++|+.|+ .|++|+|||+.. .|..+........ +.+ ....+. ...+.. .++++...
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 92 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGV 92 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETC
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEe
Confidence 34589999999999999999998 699999999954 4433221110000 000 000000 011111 14555555
Q ss_pred eeeEee--cC--eEEecCCeEEeCCEEEEccCCCCCCCchHH------------HHHHHHhc---------CCcchhhHH
Q 023957 83 PAINIT--EN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT------------ERLNQYQA---------GGPTGVELA 137 (275)
Q Consensus 83 ~~~~~~--~~--~v~~~~~~~~~~~~lilatG~~~~~~~~~~------------~~l~~~~~---------~g~~~~~~a 137 (275)
++..++ .+ .+.+ ++..+.||++|+|+|+.|..|.++. ........ +|.+++|.|
T Consensus 93 ~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a 171 (319)
T 3cty_A 93 EVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAA 171 (319)
T ss_dssp CEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHH
T ss_pred eEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHH
Confidence 555554 22 4555 5567899999999998755543211 01111110 788999999
Q ss_pred HHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCC-ceEEcC---CCc--EEeecE
Q 023957 138 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTS---TGD--TINADC 211 (275)
Q Consensus 138 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~---~g~--~~~~d~ 211 (275)
..+. ..+.+++++.+.+.+.. ...+.+.+++.|++++.+++++++..+++. ..+.+. +|+ ++++|.
T Consensus 172 ~~l~--~~g~~V~~i~~~~~~~~------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~ 243 (319)
T 3cty_A 172 ISMS--EYVKNVTIIEYMPKYMC------ENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDG 243 (319)
T ss_dssp HHHT--TTBSEEEEECSSSSCCS------CHHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSE
T ss_pred HHHH--hhCCcEEEEEcCCccCC------CHHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCE
Confidence 9998 56899999998876521 234566677899999999999999866542 234443 565 699999
Q ss_pred EEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCC
Q 023957 212 HFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 212 vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~ 264 (275)
||+|+|+.|+.+++...++ +++++|++.||++++| +.|+|||+|||+..+
T Consensus 244 vi~a~G~~p~~~~l~~~gl--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 293 (319)
T 3cty_A 244 VFIYVGLIPQTSFLKDSGV--KLDERGYIVVDSRQRT-SVPGVYAAGDVTSGN 293 (319)
T ss_dssp EEECCCEEECCGGGTTSCC--CBCTTSCBCCCTTCBC-SSTTEEECSTTBTTC
T ss_pred EEEeeCCccChHHHhhccc--cccCCccEeCCCCCcc-CCCCEEEeecccCcc
Confidence 9999999999888876654 6778899999999998 899999999999864
No 66
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=5.6e-30 Score=218.82 Aligned_cols=248 Identities=20% Similarity=0.184 Sum_probs=169.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh----cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEEeeeeE
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ----FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASPAIN 86 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~----~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 86 (275)
++||+|||||++|+++|+.|+ +|++|+|||+++.+.+......................+++ .+++++...+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~ 83 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQ 83 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEE
Confidence 579999999999999999996 48999999999976544321111111111111122222222 367788888888
Q ss_pred eecC--eEEecCCeEEeCCEEEEccCCCCCCC---chH-----------HHH-------HHHHh-c-------CC----c
Q 023957 87 ITEN--EVLTAEGRRVVYDYLVIATGHKDPVP---KTR-----------TER-------LNQYQ-A-------GG----P 131 (275)
Q Consensus 87 ~~~~--~v~~~~~~~~~~~~lilatG~~~~~~---~~~-----------~~~-------l~~~~-~-------~g----~ 131 (275)
++.. .+.+++++.+.||++|+|||+.|..| +.. .+. ++.+. . +| .
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~ 163 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASC 163 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCC
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCc
Confidence 8754 78888888899999999999985432 211 111 11221 1 32 2
Q ss_pred ch--hhHHHHHhhh--CCCC----E-EEEEeCCCcccCc---CCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceE
Q 023957 132 TG--VELAGEIAVD--FPEK----K-VTLVHKGSRLLEF---IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTY 199 (275)
Q Consensus 132 ~~--~~~a~~l~~~--~~~~----~-v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v 199 (275)
.| +|+|..+... ..+. + ++++++.+.+... ..+...+.+.+.+++.||++++++.|++++.+ .+.+
T Consensus 164 ~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~--~v~~ 241 (437)
T 3sx6_A 164 FGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDN--KMYV 241 (437)
T ss_dssp CHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEETT--EEEE
T ss_pred CcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEECC--eEEE
Confidence 33 7777444321 2233 3 9999998876321 11347788889999999999999999999753 3333
Q ss_pred E--cCC-----CcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 200 L--TST-----GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 200 ~--~~~-----g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
. ..+ ++++++|.+++++|+.++..+....++ .+++|++.||+++|++++|+|||+|||+..+.
T Consensus 242 ~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl---~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~ 311 (437)
T 3sx6_A 242 TQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL---CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPP 311 (437)
T ss_dssp EEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT---BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCC
T ss_pred EecccCCccccceEEEEeEEEEcCCCcCchhhhccccc---cCCCCcEEeChhccCCCCCCEEEEEEEeccCC
Confidence 2 233 567999999999999886555443443 57789999999999988999999999998775
No 67
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.97 E-value=1.1e-30 Score=215.43 Aligned_cols=240 Identities=17% Similarity=0.211 Sum_probs=168.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc-cccc---CCccc----ccccccccccc--cccEEE-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL-RAMV---EPSFG----KRSVINHTDYL--VNGRIV- 80 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~-~~~~---~~~~~----~~~~~~~~~~~--~~~~~~- 80 (275)
++||+|||||++|+++|+.|+ +|++|+|||+++.+|+.|... +... .+.+. ........++. .++++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICL 86 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEc
Confidence 479999999999999999998 699999999999888665321 1000 00010 00000111111 134554
Q ss_pred EeeeeEeec--C---eEEecCCeEEeCCEEEEccCC---CCCCCchHHHH-------------HHHHhc-------CCcc
Q 023957 81 ASPAINITE--N---EVLTAEGRRVVYDYLVIATGH---KDPVPKTRTER-------------LNQYQA-------GGPT 132 (275)
Q Consensus 81 ~~~~~~~~~--~---~v~~~~~~~~~~~~lilatG~---~~~~~~~~~~~-------------l~~~~~-------~g~~ 132 (275)
..++..++. + .+.+.++. +.||++|+|||. .|..|.++... ...+.. +|.+
T Consensus 87 ~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~v~vvG~g~~ 165 (332)
T 3lzw_A 87 EQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQKFAGRRVAILGGGDS 165 (332)
T ss_dssp SCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEESSCSCGGGGBTCEEEEECSSHH
T ss_pred cCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEEecCCHHHcCCCEEEEECCCHh
Confidence 355555543 2 56666664 899999999999 65544322110 011111 7888
Q ss_pred hhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCC-----CcEE
Q 023957 133 GVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST-----GDTI 207 (275)
Q Consensus 133 ~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~-----g~~~ 207 (275)
++++|..+. ..+.+++++.+.+.+.. .+...+.+++.||+++.++.+.+++.+++...+.+.+ ++++
T Consensus 166 ~~e~a~~l~--~~~~~v~~~~~~~~~~~------~~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~ 237 (332)
T 3lzw_A 166 AVDWALMLE--PIAKEVSIIHRRDKFRA------HEHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEIL 237 (332)
T ss_dssp HHHHHHHHT--TTBSEEEEECSSSSCSS------CHHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEE
T ss_pred HHHHHHHHH--hhCCeEEEEEecCcCCc------cHHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEE
Confidence 999999998 56889999999887532 1223445788999999999999998776655566554 4579
Q ss_pred eecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 208 NADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 208 ~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
++|.||+|+|+.|+.+++...++ ++ ++|++.||++++| +.|+|||+|||+..+.
T Consensus 238 ~~D~vv~a~G~~p~~~~~~~~~~--~~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~~ 291 (332)
T 3lzw_A 238 EIDDLIVNYGFVSSLGPIKNWGL--DI-EKNSIVVKSTMET-NIEGFFAAGDICTYEG 291 (332)
T ss_dssp ECSEEEECCCEECCCGGGGGSSC--CE-ETTEEECCTTSBC-SSTTEEECGGGEECTT
T ss_pred ECCEEEEeeccCCCchHHhhcCc--cc-cCCeEEeCCCCce-ecCCEEEccceecCCC
Confidence 99999999999999888877766 44 5799999999998 8999999999996543
No 68
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.97 E-value=3.4e-30 Score=215.06 Aligned_cols=246 Identities=21% Similarity=0.219 Sum_probs=171.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccccc----ccCCccc----ccccccccccc--cccEEE
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA----MVEPSFG----KRSVINHTDYL--VNGRIV 80 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~--~~~~~~ 80 (275)
.++||+|||||++|+++|+.|+ +|++|+|||+++.+++.|..... ...+.+. ........+.. .++.+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 92 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVV 92 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEE
Confidence 4589999999999999999998 69999999999887765532110 0000000 00000000111 134443
Q ss_pred E-eeeeEeec--C---eEEecCCeEEeCCEEEEccCC---CCCCCchHH--HHH------------HHHhc-------CC
Q 023957 81 A-SPAINITE--N---EVLTAEGRRVVYDYLVIATGH---KDPVPKTRT--ERL------------NQYQA-------GG 130 (275)
Q Consensus 81 ~-~~~~~~~~--~---~v~~~~~~~~~~~~lilatG~---~~~~~~~~~--~~l------------~~~~~-------~g 130 (275)
. ..+..++. . .+.+.++..+.||++|+|+|+ .|..+.++. +.+ +.+.. +|
T Consensus 93 ~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~~~~~~vvVvG~G 172 (360)
T 3ab1_A 93 LNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGG 172 (360)
T ss_dssp CSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGGGGTTCEEEEECSS
T ss_pred cCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHHHcCCCcEEEECCC
Confidence 2 34444442 1 567777778999999999998 444433321 111 01111 78
Q ss_pred cchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEc--CCC--c
Q 023957 131 PTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLT--STG--D 205 (275)
Q Consensus 131 ~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~--~~g--~ 205 (275)
.+++++|..+. ..+.+++++.+.+.+... +...+.+.+.+++.|++++.+++|.+++.+++.+ .+.+ .+| +
T Consensus 173 ~~g~e~A~~l~--~~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~ 248 (360)
T 3ab1_A 173 DSALDWTVGLI--KNAASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKW 248 (360)
T ss_dssp HHHHHHHHHTT--TTSSEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEE
T ss_pred HHHHHHHHHHH--hcCCEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeE
Confidence 88999999998 568999999998776432 3466677788888999999999999998764432 3444 377 5
Q ss_pred EEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 206 TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 206 ~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
++++|.||+|+|+.|+.+++...++ +++ +|++.||++++| +.|+|||+|||+..+.
T Consensus 249 ~i~~D~vi~a~G~~p~~~~l~~~~~--~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~ 304 (360)
T 3ab1_A 249 TVEADRLLILIGFKSNLGPLARWDL--ELY-ENALVVDSHMKT-SVDGLYAAGDIAYYPG 304 (360)
T ss_dssp EEECSEEEECCCBCCSCGGGGGSSC--CEE-TTEEECCTTSBC-SSTTEEECSTTEECTT
T ss_pred EEeCCEEEECCCCCCCHHHHHhhcc--ccc-cCeeeecCCCcC-CCCCEEEecCccCCCC
Confidence 7999999999999999888877655 444 789999999998 8999999999998654
No 69
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=3.5e-30 Score=212.92 Aligned_cols=242 Identities=17% Similarity=0.206 Sum_probs=165.4
Q ss_pred cCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccccccc-CCccc----ccccc-cccccc--cccEEE
Q 023957 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV-EPSFG----KRSVI-NHTDYL--VNGRIV 80 (275)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~-~~~~~----~~~~~-~~~~~~--~~~~~~ 80 (275)
+..++||+|||||++|+++|+.|+ .|++|+|||+.. .++.+....... .+.+. ...+. ...++. .++++.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~ 89 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLR 89 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 345689999999999999999998 699999999763 333222110000 00010 00000 111111 145666
Q ss_pred EeeeeEeec---CeE-EecCCeEEeCCEEEEccCCCCCCCchHHHH------------HHHHh---c------CCcchhh
Q 023957 81 ASPAINITE---NEV-LTAEGRRVVYDYLVIATGHKDPVPKTRTER------------LNQYQ---A------GGPTGVE 135 (275)
Q Consensus 81 ~~~~~~~~~---~~v-~~~~~~~~~~~~lilatG~~~~~~~~~~~~------------l~~~~---~------~g~~~~~ 135 (275)
...+..++. ..+ .+.++..+.||++|+|||+.|..|.++... ..... + +|.+++|
T Consensus 90 ~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e 169 (335)
T 2a87_A 90 MEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAME 169 (335)
T ss_dssp CCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHH
T ss_pred EeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHH
Confidence 555555553 256 667777899999999999886665443211 11110 0 7889999
Q ss_pred HHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHH-HHHHhCCCEEEcCceeeeecCCCCCceEEcC---CC--cEEee
Q 023957 136 LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTR-DWLISKKVDVKLGERVNLDSVSEGSDTYLTS---TG--DTINA 209 (275)
Q Consensus 136 ~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~---~g--~~~~~ 209 (275)
+|..+. ..+.+++++.+.+.+.. .+.+. +.+++.||++++++.+.+++.+++...+.+. +| +++++
T Consensus 170 ~a~~l~--~~g~~V~l~~~~~~~~~------~~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~ 241 (335)
T 2a87_A 170 EATFLT--RFARSVTLVHRRDEFRA------SKIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPV 241 (335)
T ss_dssp HHHHHT--TTCSEEEEECSSSSCSS------CTTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECC
T ss_pred HHHHHH--HhCCeEEEEEcCCcCCc------cHHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeec
Confidence 999998 56899999998876532 12222 3456789999999999999876543344443 44 57999
Q ss_pred cEEEEcCCCCCCchhhcccccccccCCCCceEeCCC-ccccCCCCeEEeccccCCC
Q 023957 210 DCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 210 d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~-~~~~~~~~v~a~Gd~~~~~ 264 (275)
|.||+|+|++|+.+++. .+ ++++++|++.||++ ++| +.|+|||+|||+..+
T Consensus 242 D~vi~a~G~~p~~~~~~-~~--l~~~~~G~i~vd~~~~~t-~~~~iya~GD~~~~~ 293 (335)
T 2a87_A 242 TGVFVAIGHEPRSGLVR-EA--IDVDPDGYVLVQGRTTST-SLPGVFAAGDLVDRT 293 (335)
T ss_dssp SCEEECSCEEECCTTTB-TT--BCBCTTSCBCCSTTSSBC-SSTTEEECGGGTCCS
T ss_pred CEEEEccCCccChhHhh-cc--cccCCCccEEeCCCCCcc-CCCCEEEeeecCCcc
Confidence 99999999999988876 33 46778899999997 566 899999999999864
No 70
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.97 E-value=1.8e-29 Score=215.31 Aligned_cols=247 Identities=24% Similarity=0.232 Sum_probs=170.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh---cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEEeeeeEe
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASPAINI 87 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~---~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (275)
++||+|||||++|+++|++|+ +|++|+|||+++.+++......................+.+ .+++++...+..+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEE
Confidence 479999999999999999997 38999999999987764322111111111122222222322 3677777778888
Q ss_pred ecC--eEEecCCeEEeCCEEEEccCCCCCCCchHH----------HH-------HHHHhc--------CCcc----h--h
Q 023957 88 TEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT----------ER-------LNQYQA--------GGPT----G--V 134 (275)
Q Consensus 88 ~~~--~v~~~~~~~~~~~~lilatG~~~~~~~~~~----------~~-------l~~~~~--------~g~~----~--~ 134 (275)
+.. .+.++++..+.||++|+|||+.|..|+... +. ++.+.. +|.+ + +
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~ 161 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAY 161 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHH
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcccccCCCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHH
Confidence 754 788888888999999999999876664311 11 112211 2222 2 7
Q ss_pred hHHHHHhhh--CCC----CEEEEEeCCCcccC---cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCC--
Q 023957 135 ELAGEIAVD--FPE----KKVTLVHKGSRLLE---FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST-- 203 (275)
Q Consensus 135 ~~a~~l~~~--~~~----~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~-- 203 (275)
|.|..+... ..+ .+++++.+.+.+.. ...+...+.+.+.+++.||++++++.|++++.+ . +.+++
T Consensus 162 E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~--~--v~~~~~~ 237 (430)
T 3h28_A 162 EFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPD--K--VIYEDLN 237 (430)
T ss_dssp HHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSS--E--EEEECTT
T ss_pred HHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeCC--e--EEEEecC
Confidence 777544321 123 57899998876532 111347788889999999999999999999753 2 33333
Q ss_pred --CcEEeecEEEEcCCCCCCchhhcccccccccCCCC-ceEeCCCccccCCCCeEEeccccCCCC
Q 023957 204 --GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHG-MLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 204 --g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g-~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
++++++|.+++++|+.|+. ++...+.++ .+++| ++.||+++|++++|+|||+|||+..+.
T Consensus 238 ~~g~~i~~D~vv~a~G~~~~~-~l~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~ 300 (430)
T 3h28_A 238 GNTHEVPAKFTMFMPSFQGPE-VVASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPP 300 (430)
T ss_dssp SCEEEEECSEEEEECEEECCH-HHHTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCC
T ss_pred CCceEEeeeEEEECCCCccch-hHhhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCC
Confidence 6789999999999999864 444431222 56789 999999999988999999999998775
No 71
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.97 E-value=9.4e-30 Score=208.12 Aligned_cols=239 Identities=21% Similarity=0.228 Sum_probs=165.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccc---cCCcc-cc-cccccccccc--cccEEEEe-e
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM---VEPSF-GK-RSVINHTDYL--VNGRIVAS-P 83 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~---~~~~~-~~-~~~~~~~~~~--~~~~~~~~-~ 83 (275)
++||+|||||++|+++|+.|+ .|++|+|||+. .|+.|...... ..... .. .......++. .++++... +
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 78 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQS 78 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCE
Confidence 379999999999999999998 69999999864 33333211111 00000 00 0000111111 14566655 5
Q ss_pred eeEeec-------CeEEecCCeEEeCCEEEEccCCCCCCCchHH------------HHHHHHh-c--------CCcchhh
Q 023957 84 AINITE-------NEVLTAEGRRVVYDYLVIATGHKDPVPKTRT------------ERLNQYQ-A--------GGPTGVE 135 (275)
Q Consensus 84 ~~~~~~-------~~v~~~~~~~~~~~~lilatG~~~~~~~~~~------------~~l~~~~-~--------~g~~~~~ 135 (275)
+..++. ..+.++++..+.||++|+|||+.|..|.++. ..+.... . +|.+++|
T Consensus 79 v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e 158 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVE 158 (310)
T ss_dssp EEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHH
T ss_pred EEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHH
Confidence 666642 2566777878999999999998754433210 0111111 1 7889999
Q ss_pred HHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHh-CCCEEEcCceeeeecCCCCCc-eEEcC---CCc--EEe
Q 023957 136 LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--TIN 208 (275)
Q Consensus 136 ~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~~~ 208 (275)
+|..+. ..+.+++++.+.+.+. . .+.+.+.+++ .|++++.++.++++..+++.+ .+.+. +|+ +++
T Consensus 159 ~A~~l~--~~g~~Vtlv~~~~~~~--~----~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~ 230 (310)
T 1fl2_A 159 AAIDLA--GIVEHVTLLEFAPEMK--A----DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIE 230 (310)
T ss_dssp HHHHHH--TTBSEEEEECSSSSCC--S----CHHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEE
T ss_pred HHHHHH--HhCCEEEEEEeCcccC--c----cHHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEE
Confidence 999998 5689999999988752 2 2445666776 699999999999998654443 35543 353 789
Q ss_pred ecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 209 ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 209 ~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
+|.||+|+|++|+.+++... +.++++|++.||++++| +.|+|||+|||+..|.
T Consensus 231 ~D~vi~a~G~~p~~~~l~~~---l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~~ 283 (310)
T 1fl2_A 231 LAGIFVQIGLLPNTNWLEGA---VERNRMGEIIIDAKCET-NVKGVFAAGDCTTVPY 283 (310)
T ss_dssp CSEEEECSCEEESCGGGTTT---SCBCTTSCBCCCTTCBC-SSTTEEECSTTBSCSS
T ss_pred cCEEEEeeCCccCchHHhcc---ccccCCCcEEcCCCCcc-CCCCEEEeecccCCcc
Confidence 99999999999998888652 46778899999999997 8999999999998764
No 72
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.97 E-value=6.6e-30 Score=226.44 Aligned_cols=248 Identities=17% Similarity=0.189 Sum_probs=172.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCC-C-------Cccccccc---cccc-----------------cCCc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK-E-------YFEITWAS---LRAM-----------------VEPS 61 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~-~-------~~~~~~~~---~~~~-----------------~~~~ 61 (275)
..++||+||||||||++||.+|+ .|++|+|||+. + .+|+.+.. .+.. ....
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 34689999999999999999998 69999999973 2 13322110 0000 0000
Q ss_pred ccc-------ccccccc------------c-c-ccccEEEEeeeeEeecCeEE--ecCC--eEEeCCEEEEccCCCCCCC
Q 023957 62 FGK-------RSVINHT------------D-Y-LVNGRIVASPAINITENEVL--TAEG--RRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 62 ~~~-------~~~~~~~------------~-~-~~~~~~~~~~~~~~~~~~v~--~~~~--~~~~~~~lilatG~~~~~~ 116 (275)
... ..+..+. . + ..++.++.+.+..++...+. ..+| ..+.||+||+|||+.|..|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~p 264 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYP 264 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCCC
Confidence 000 0000000 0 0 12566676666666666444 3455 4689999999999987766
Q ss_pred chHHHH-----HHHHhc------------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCC
Q 023957 117 KTRTER-----LNQYQA------------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV 179 (275)
Q Consensus 117 ~~~~~~-----l~~~~~------------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 179 (275)
+++... ...+.. +|.+|+|+|..+. ..+.+++++.+. .+++.+++++.+.+.+.+++.||
T Consensus 265 ~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv 341 (598)
T 2x8g_A 265 EIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLA--SLGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGV 341 (598)
T ss_dssp SSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHH--HTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHH--HcCCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCC
Confidence 543211 111111 8899999999998 458899999988 66677888889999999999999
Q ss_pred EEEcCceeeeecCC------C---CCceEE--cCCCcEEe--ecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCc
Q 023957 180 DVKLGERVNLDSVS------E---GSDTYL--TSTGDTIN--ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENL 246 (275)
Q Consensus 180 ~i~~~~~v~~i~~~------~---~~~~v~--~~~g~~~~--~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~ 246 (275)
++++++.+.+++.. + +.+.+. ..+|++++ +|.||+|+|++|+.+++.....+++++++|+|.||+++
T Consensus 342 ~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 421 (598)
T 2x8g_A 342 KFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDE 421 (598)
T ss_dssp EEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTS
T ss_pred EEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCC
Confidence 99999887777421 1 233333 45776555 99999999999998876433444577888999999999
Q ss_pred cccCCCCeEEeccccC
Q 023957 247 RVKGQKNIFAIGDITD 262 (275)
Q Consensus 247 ~~~~~~~v~a~Gd~~~ 262 (275)
+| +.|+|||+|||+.
T Consensus 422 ~t-s~~~VyA~GD~~~ 436 (598)
T 2x8g_A 422 QT-TVSNVYAIGDINA 436 (598)
T ss_dssp BC-SSTTEEECGGGBT
T ss_pred cC-CCCCEEEEeeecC
Confidence 98 8999999999964
No 73
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.96 E-value=6.4e-29 Score=205.18 Aligned_cols=240 Identities=16% Similarity=0.194 Sum_probs=163.0
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcC----CCCcccccccccccc-CCcccc-----cccccccccc--cccE
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDP----KEYFEITWASLRAMV-EPSFGK-----RSVINHTDYL--VNGR 78 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~----~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~--~~~~ 78 (275)
.++||+|||||++|+++|+.|+ .|++|+|||+ ....+..+....... .+.+.. .......+.. .+++
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 86 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTT 86 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCE
Confidence 3589999999999999999998 6999999999 333333221110000 000100 0000011111 2466
Q ss_pred EEEeeeeEeecC----eEEecCCeEEeCCEEEEccCCCCCCCchH---H-------------HHHHHHh---c-------
Q 023957 79 IVASPAINITEN----EVLTAEGRRVVYDYLVIATGHKDPVPKTR---T-------------ERLNQYQ---A------- 128 (275)
Q Consensus 79 ~~~~~~~~~~~~----~v~~~~~~~~~~~~lilatG~~~~~~~~~---~-------------~~l~~~~---~------- 128 (275)
+....+..++.. .+.+ ++..+.+|++|+|+|+.|..|.++ . ....... .
T Consensus 87 ~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv 165 (333)
T 1vdc_A 87 IFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVI 165 (333)
T ss_dssp EECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEE
T ss_pred EEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEE
Confidence 666666666532 4655 677899999999999875443221 1 1122211 1
Q ss_pred -CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHH-HHHHhCCCEEEcCceeeeecCCCC--Cc-eEEcC-
Q 023957 129 -GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTR-DWLISKKVDVKLGERVNLDSVSEG--SD-TYLTS- 202 (275)
Q Consensus 129 -~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~- 202 (275)
+|.+++++|..+. ..+.+++++.+.+.+.. .+.+. +.+++.||+++.++.+.+++.+++ .+ .+.+.
T Consensus 166 G~G~~g~e~A~~l~--~~g~~V~lv~~~~~~~~------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~ 237 (333)
T 1vdc_A 166 GGGDSAMEEANFLT--KYGSKVYIIHRRDAFRA------SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKN 237 (333)
T ss_dssp CCSHHHHHHHHHHT--TTSSEEEEECSSSSCCS------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEE
T ss_pred CCChHHHHHHHHHH--hcCCeEEEEecCCcCCc------cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEe
Confidence 7889999999998 56899999999876521 23333 445678999999999999986653 32 24443
Q ss_pred --CC--cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCC-ccccCCCCeEEeccccCCC
Q 023957 203 --TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 203 --~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~-~~~~~~~~v~a~Gd~~~~~ 264 (275)
+| +++++|.||+|+|++|+..++. .+ ++++++|++.||++ ++| +.|+|||+|||+..+
T Consensus 238 ~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~--l~~~~~G~i~vd~~~~~t-~~~~vya~GD~~~~~ 300 (333)
T 1vdc_A 238 VVTGDVSDLKVSGLFFAIGHEPATKFLD-GG--VELDSDGYVVTKPGTTQT-SVPGVFAAGDVQDKK 300 (333)
T ss_dssp TTTCCEEEEECSEEEECSCEEESCGGGT-TS--SCBCTTSCBCCCTTSCBC-SSTTEEECGGGGCSS
T ss_pred cCCCceEEEecCEEEEEeCCccchHHhh-cc--ccccCCCCEEechhhccc-CCCCEEEeeeccCCC
Confidence 45 5799999999999999988876 33 46677899999997 466 899999999999875
No 74
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.96 E-value=5.8e-28 Score=202.15 Aligned_cols=249 Identities=17% Similarity=0.261 Sum_probs=165.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCccccccccccc---cCCccc------------------------
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWASLRAM---VEPSFG------------------------ 63 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~~~~~~~~~~~~---~~~~~~------------------------ 63 (275)
++||+|||||++|+++|++|+ .|+ +|+|||+++ +|..|...... ..+.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 479999999999999999998 688 999999998 55433211100 000000
Q ss_pred ---c-ccccc-ccccc--cccEEEEe-eeeEeecC----eEEecCCeEEeCCEEEEccCCC--CCCCc---hHHHH---H
Q 023957 64 ---K-RSVIN-HTDYL--VNGRIVAS-PAINITEN----EVLTAEGRRVVYDYLVIATGHK--DPVPK---TRTER---L 123 (275)
Q Consensus 64 ---~-~~~~~-~~~~~--~~~~~~~~-~~~~~~~~----~v~~~~~~~~~~~~lilatG~~--~~~~~---~~~~~---l 123 (275)
. ..... ...+. .++++... .+..++.. .+.+.++ .+.||++|+|||+. |.+|. ..... .
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~p~ip~~~~~~~~~~~~~ 161 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF 161 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTSBCCCSSSCEEGGGCSCG
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCccCCCCCceechhhcCCh
Confidence 0 00000 00111 14555543 45555432 5556555 68899999999986 44553 00000 1
Q ss_pred HHHhc-------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccC-c------CCcchHHHHHHHHHhCC-CEEEcCceee
Q 023957 124 NQYQA-------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-F------IGPKAGDKTRDWLISKK-VDVKLGERVN 188 (275)
Q Consensus 124 ~~~~~-------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~g-v~i~~~~~v~ 188 (275)
..+.. +|.+|+|+|..+. ..+.+++++.+.+.+.. . ..+...+.+.+.+++.| ++++.++.|.
T Consensus 162 ~~~~~~~vvVvG~G~~g~e~a~~l~--~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~ 239 (369)
T 3d1c_A 162 DNFNKGQYVVIGGNESGFDAAYQLA--KNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVK 239 (369)
T ss_dssp GGSCSSEEEEECCSHHHHHHHHHHH--HTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEE
T ss_pred hhcCCCEEEEECCCcCHHHHHHHHH--hcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEE
Confidence 11111 7889999999998 45889999999887653 1 33445677888888887 9999999999
Q ss_pred eecCCCCCceEEcCCCcEEe-ecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCCCC
Q 023957 189 LDSVSEGSDTYLTSTGDTIN-ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 267 (275)
Q Consensus 189 ~i~~~~~~~~v~~~~g~~~~-~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~~~ 267 (275)
+++.+++...+.+.+|+++. +|.||+|+|++|+.+++....+ + +++|++.||+.++.+++|+||++|||+..+...
T Consensus 240 ~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~--~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~ 316 (369)
T 3d1c_A 240 DIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLF--V-TTNQDIKLTTHDESTRYPNIFMIGATVENDNAK 316 (369)
T ss_dssp EEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHS--C-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCC
T ss_pred EEEecCCceEEEecCCeEeccCCceEEeeccCCccchhhhhhc--c-CCCCCEEechhhcccCCCCeEEeccccccCCee
Confidence 99655555667788887665 5999999999998866664443 4 678899999875544899999999999887654
Q ss_pred C
Q 023957 268 S 268 (275)
Q Consensus 268 ~ 268 (275)
.
T Consensus 317 ~ 317 (369)
T 3d1c_A 317 L 317 (369)
T ss_dssp C
T ss_pred E
Confidence 3
No 75
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.96 E-value=4e-28 Score=211.26 Aligned_cols=241 Identities=20% Similarity=0.251 Sum_probs=166.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccc---cCCcc-cc-cccccccccc--cccEEEEe
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM---VEPSF-GK-RSVINHTDYL--VNGRIVAS 82 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~---~~~~~-~~-~~~~~~~~~~--~~~~~~~~ 82 (275)
...+||+|||||+||+++|++|+ .|++|+|+|+. .|+.+...... ..... .. .......... .++++...
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcC
Confidence 34689999999999999999998 69999999873 34333211111 00000 00 0000011111 14566555
Q ss_pred -eeeEeec-------CeEEecCCeEEeCCEEEEccCCCCCCCchHHH-HH-----------H-H-Hhc-------CCcch
Q 023957 83 -PAINITE-------NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE-RL-----------N-Q-YQA-------GGPTG 133 (275)
Q Consensus 83 -~~~~~~~-------~~v~~~~~~~~~~~~lilatG~~~~~~~~~~~-~l-----------~-~-~~~-------~g~~~ 133 (275)
++..++. ..+.++++..+.+|++|+|||+.|..|.++.. .. . . +.. +|.+|
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g 367 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSG 367 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHH
T ss_pred CEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHH
Confidence 5666642 25777788889999999999987554332110 00 0 0 011 78899
Q ss_pred hhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHh-CCCEEEcCceeeeecCCCCCc-eEEcC---CCc--E
Q 023957 134 VELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--T 206 (275)
Q Consensus 134 ~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~ 206 (275)
+|+|..+.. .+.+++++.+.+.+.. .+.+.+.+++ .||++++++.++++..+++.+ .+.+. +|+ +
T Consensus 368 ~E~A~~L~~--~g~~Vtlv~~~~~l~~------~~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~ 439 (521)
T 1hyu_A 368 VEAAIDLAG--IVEHVTLLEFAPEMKA------DQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHS 439 (521)
T ss_dssp HHHHHHHHH--HBSEEEEECSSSSCCS------CHHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEE
T ss_pred HHHHHHHHh--hCCEEEEEEeCcccCc------CHHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEE
Confidence 999999984 5889999998877542 2445666776 599999999999998655443 35543 353 6
Q ss_pred EeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 207 INADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 207 ~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
+++|.||+++|..|+.+++.. . ++++++|++.||++++| +.|+|||+|||+..|.
T Consensus 440 i~~D~vi~a~G~~pn~~~l~~-~--l~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~~~~~ 494 (521)
T 1hyu_A 440 VALAGIFVQIGLLPNTHWLEG-A--LERNRMGEIIIDAKCET-SVKGVFAAGDCTTVPY 494 (521)
T ss_dssp EECSEEEECCCEEESCGGGTT-T--SCBCTTSCBCCCTTCBC-SSTTEEECSTTBCCSS
T ss_pred EEcCEEEECcCCCCCchHHhh-h--hccCCCCcEEeCCCCCC-CCCCEEEeecccCCCc
Confidence 899999999999999888865 2 46778899999999998 8999999999998764
No 76
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=1.4e-27 Score=198.66 Aligned_cols=237 Identities=17% Similarity=0.200 Sum_probs=149.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccccccc------------CCcccc--------ccccc-c
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV------------EPSFGK--------RSVIN-H 70 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~------------~~~~~~--------~~~~~-~ 70 (275)
++||+|||||++|+++|+.|+ +|++|+|||+++.+|..|....... ...... ..+.. .
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 479999999999999999998 6999999999998876654311000 000000 00000 0
Q ss_pred cccc--cccEEEE-eeeeEeec--C--e-EEecCCeEEeCCEEEEccCC--CCCCCchHHH-H-------------HHHH
Q 023957 71 TDYL--VNGRIVA-SPAINITE--N--E-VLTAEGRRVVYDYLVIATGH--KDPVPKTRTE-R-------------LNQY 126 (275)
Q Consensus 71 ~~~~--~~~~~~~-~~~~~~~~--~--~-v~~~~~~~~~~~~lilatG~--~~~~~~~~~~-~-------------l~~~ 126 (275)
.++. .++++.. .++..++. . . +.++++ .+.||++|+|||. .|..|.++.. . ...+
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAPF 161 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGGG
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCChhhc
Confidence 0000 1334432 34444432 2 3 666666 8999999999995 4444432110 0 0011
Q ss_pred hc-------CCcchhhHHHHHhhhCCCCEEEEEeCC-CcccCcC--CcchHHHHHHHHH---------------------
Q 023957 127 QA-------GGPTGVELAGEIAVDFPEKKVTLVHKG-SRLLEFI--GPKAGDKTRDWLI--------------------- 175 (275)
Q Consensus 127 ~~-------~g~~~~~~a~~l~~~~~~~~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~--------------------- 175 (275)
.. +|.+++|+|..+.. .+ +++++.+. +.+.+.. ...+.+.+.+.+.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~--~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVST--VA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMV 238 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTT--TS-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCC
T ss_pred CCCEEEEECCCcCHHHHHHHHHh--hC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccC
Confidence 11 88999999999984 34 69999887 3444321 1122222222221
Q ss_pred -------hCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCC--c
Q 023957 176 -------SKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN--L 246 (275)
Q Consensus 176 -------~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~--~ 246 (275)
+.|+ +..+..+.+++. ..+.+.+|+++++|.||+|+|++|+.+++...++ . +++|++.||++ +
T Consensus 239 ~~~~~~~~~g~-i~~~~~v~~~~~----~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl--~-~~~G~i~vd~~~l~ 310 (357)
T 4a9w_A 239 PPVLDARARGV-LAAVPPPARFSP----TGMQWADGTERAFDAVIWCTGFRPALSHLKGLDL--V-TPQGQVEVDGSGLR 310 (357)
T ss_dssp HHHHHHHHTTC-CCEECCCSEEET----TEEECTTSCEEECSEEEECCCBCCCCGGGTTTTC--B-CTTSCBCBCTTSCB
T ss_pred hhHHHHHhcCc-eEEecCcceEeC----CeeEECCCCEecCCEEEECCCcCCCCcccCcccc--c-CCCCCccccCCccc
Confidence 2343 444455555543 2478889999999999999999999899887665 4 67899999999 7
Q ss_pred cccCCCCeEEec--cccC
Q 023957 247 RVKGQKNIFAIG--DITD 262 (275)
Q Consensus 247 ~~~~~~~v~a~G--d~~~ 262 (275)
++ +.|+|||+| ||+.
T Consensus 311 ~t-~~~~vya~Gd~d~~~ 327 (357)
T 4a9w_A 311 AL-AVPSVWLLGYGDWNG 327 (357)
T ss_dssp BS-SCTTEEECSSCGGGS
T ss_pred CC-CCCCeEEeccccccc
Confidence 77 899999999 6665
No 77
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.94 E-value=6.5e-27 Score=201.53 Aligned_cols=248 Identities=15% Similarity=0.178 Sum_probs=159.1
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cC-----CcEEEEcCCCCccccccccccc--cC------------Cccc---------
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FS-----ADVTLIDPKEYFEITWASLRAM--VE------------PSFG--------- 63 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g-----~~v~vie~~~~~~~~~~~~~~~--~~------------~~~~--------- 63 (275)
++||+|||||++|+++|..|+ .| .+|+|||+++.+++....+... +. +...
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~ 109 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHK 109 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhh
Confidence 469999999999999999998 57 9999999999887544322100 00 0000
Q ss_pred ---------------c-cccccc----cccccccEEEE-eeeeEeecC---------eEEecCCe----EEeCCEEEEcc
Q 023957 64 ---------------K-RSVINH----TDYLVNGRIVA-SPAINITEN---------EVLTAEGR----RVVYDYLVIAT 109 (275)
Q Consensus 64 ---------------~-~~~~~~----~~~~~~~~~~~-~~~~~~~~~---------~v~~~~~~----~~~~~~lilat 109 (275)
. ..+..+ .+.+ +..+.. .++..++.. .+.+.++. .+.||+||+||
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAt 188 (463)
T 3s5w_A 110 HDRLVDFINLGTFYPCRMEFNDYLRWVASHF-QEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSP 188 (463)
T ss_dssp TTCHHHHHHHCCSCCBHHHHHHHHHHHHTTC-TTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECC
T ss_pred cCceeecccccCCCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECC
Confidence 0 000000 0001 122322 234444321 45555554 78999999999
Q ss_pred CCCCCCCch-H---H-----------HHHHHHh-----c-------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcC
Q 023957 110 GHKDPVPKT-R---T-----------ERLNQYQ-----A-------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI 162 (275)
Q Consensus 110 G~~~~~~~~-~---~-----------~~l~~~~-----~-------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~ 162 (275)
|+.|.+|.. . . ..+..+. . +|.+|+|+|..|....++.+++++.+.+.+.+..
T Consensus 189 G~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~ 268 (463)
T 3s5w_A 189 GGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPAD 268 (463)
T ss_dssp CCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCC
T ss_pred CCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCcc
Confidence 998877751 1 0 1122221 1 8899999999999777799999999988764421
Q ss_pred C---------c-----------chHHHHHHHHHh--------------------------CCCEEEcCceeeeecCCCCC
Q 023957 163 G---------P-----------KAGDKTRDWLIS--------------------------KKVDVKLGERVNLDSVSEGS 196 (275)
Q Consensus 163 ~---------~-----------~~~~~~~~~~~~--------------------------~gv~i~~~~~v~~i~~~~~~ 196 (275)
+ + .....+.+.+.. .|++++.+++|++++.+++.
T Consensus 269 ~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~ 348 (463)
T 3s5w_A 269 DSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG 348 (463)
T ss_dssp CCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE
T ss_pred CCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE
Confidence 1 1 111111111111 69999999999999877777
Q ss_pred ceEEcC---CCc--EEeecEEEEcCCCCCC--chhhcccccccccCCCCceEeCCCccccC----CCCeEEeccccCCCC
Q 023957 197 DTYLTS---TGD--TINADCHFLCTGKPVG--SDWLKDTILKDSLDTHGMLMVDENLRVKG----QKNIFAIGDITDIRV 265 (275)
Q Consensus 197 ~~v~~~---~g~--~~~~d~vv~a~G~~~~--~~~~~~~~~~~~~~~~g~i~v~~~~~~~~----~~~v~a~Gd~~~~~~ 265 (275)
+.+.+. +|+ ++++|.||+|+|++|+ .+++..... .+ |++.||+++++.. .|+||++|||.....
T Consensus 349 ~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~--~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g 423 (463)
T 3s5w_A 349 IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAE--YL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASHG 423 (463)
T ss_dssp EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGG--GB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHHC
T ss_pred EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHH--Hh---CCcccCcccccccCCCCCCeEEEcCCCcccCC
Confidence 667665 665 4999999999999998 566655442 12 8899999998743 456999999986554
Q ss_pred C
Q 023957 266 S 266 (275)
Q Consensus 266 ~ 266 (275)
.
T Consensus 424 ~ 424 (463)
T 3s5w_A 424 L 424 (463)
T ss_dssp T
T ss_pred c
Confidence 4
No 78
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.94 E-value=1.5e-27 Score=203.78 Aligned_cols=240 Identities=18% Similarity=0.113 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEEeeeeEe
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASPAINI 87 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (275)
...+||+|||||+|||++|+.|+ .|++|+|||+.+.+|+.+.. +...............+++ .++++..+..+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~--gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~- 196 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVY--GIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG- 196 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHH--TSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeee--cCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec-
Confidence 35689999999999999999998 69999999999887644321 0101111111111111111 134444332221
Q ss_pred ecCeEEecCCeEEeCCEEEEccCCC-C---CCCchH-------HHHHH--------H--------Hh-c---------CC
Q 023957 88 TENEVLTAEGRRVVYDYLVIATGHK-D---PVPKTR-------TERLN--------Q--------YQ-A---------GG 130 (275)
Q Consensus 88 ~~~~v~~~~~~~~~~~~lilatG~~-~---~~~~~~-------~~~l~--------~--------~~-~---------~g 130 (275)
..+.+++. ...||++++|||+. | .+|+.. .+.+. . +. . +|
T Consensus 197 --~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG 273 (456)
T 2vdc_G 197 --RDASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGG 273 (456)
T ss_dssp --TTBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSS
T ss_pred --cEEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCC
Confidence 11222222 35799999999986 3 333321 11121 0 01 1 78
Q ss_pred cchhhHHHHHhhhCCCC-EEEEEeCCCcc-cCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCC--ceEE---c--
Q 023957 131 PTGVELAGEIAVDFPEK-KVTLVHKGSRL-LEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS--DTYL---T-- 201 (275)
Q Consensus 131 ~~~~~~a~~l~~~~~~~-~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~---~-- 201 (275)
.+|+++|..+.. .+. +|+++.+.+.. ++... .. .+.+++.||++++++.++++..++.. +.+. +
T Consensus 274 ~~a~d~A~~~~r--~Ga~~Vtiv~r~~~~~~p~~~----~e-~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~ 346 (456)
T 2vdc_G 274 DTAMDCVRTAIR--QGATSVKCLYRRDRKNMPGSQ----RE-VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGV 346 (456)
T ss_dssp HHHHHHHHHHHH--TTCSEEEEECSSCSTTCSSCH----HH-HHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEE
T ss_pred hhHHHHHHHHHH--cCCCEEEEEEeCCccCCCCCH----HH-HHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecc
Confidence 899999988763 354 69999988765 33222 12 34577789999999998888643211 2221 1
Q ss_pred --C---------CC--cEEeecEEEEcCCCCCCch--hhcccccccccCCCCceEeCCC-ccccCCCCeEEeccccCCCC
Q 023957 202 --S---------TG--DTINADCHFLCTGKPVGSD--WLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 202 --~---------~g--~~~~~d~vv~a~G~~~~~~--~~~~~~~~~~~~~~g~i~v~~~-~~~~~~~~v~a~Gd~~~~~~ 265 (275)
. +| .++++|.||+|+|+.|+.. ++...++ +++++|++.||++ ++| +.|+|||+|||+..+.
T Consensus 347 ~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl--~~~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g~~ 423 (456)
T 2vdc_G 347 ADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPEL--KVTRWGTLLVDHRTKMT-NMDGVFAAGDIVRGAS 423 (456)
T ss_dssp EEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTS--CBCTTSSBCCCTTTCBC-SSTTEEECGGGGSSCC
T ss_pred cCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCe--eECCCCCEEECCCCCcC-CCCCEEEeccccCCch
Confidence 1 23 3789999999999999765 6665554 6788999999998 897 8999999999998664
Q ss_pred C
Q 023957 266 S 266 (275)
Q Consensus 266 ~ 266 (275)
.
T Consensus 424 ~ 424 (456)
T 2vdc_G 424 L 424 (456)
T ss_dssp S
T ss_pred H
Confidence 3
No 79
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.93 E-value=1.2e-25 Score=192.39 Aligned_cols=241 Identities=14% Similarity=0.095 Sum_probs=154.8
Q ss_pred CCeEEEEcCChHHHHHHHHhhc--------CCcEEEEcCCCCccccccccccccCCc-ccccccccccccc--cccEEEE
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQF--------SADVTLIDPKEYFEITWASLRAMVEPS-FGKRSVINHTDYL--VNGRIVA 81 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~~--------g~~v~vie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ 81 (275)
++||+|||||+||+++|..|.+ +++|+|||+.+.+++.+. .+..... ..........+++ .+++++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~--~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~ 80 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR--SGVAPDHPKIKSISKQFEKTAEDPRFRFFG 80 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH--HTSCTTCTGGGGGHHHHHHHHTSTTEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc--cccCCCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 4799999999999999999865 899999999987664331 1111100 0011111111111 2455543
Q ss_pred eeeeEeecCeEEecCCeEEeCCEEEEccCCC-CC---CCchH------HHHH-H----------H---Hhc-------CC
Q 023957 82 SPAINITENEVLTAEGRRVVYDYLVIATGHK-DP---VPKTR------TERL-N----------Q---YQA-------GG 130 (275)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~~lilatG~~-~~---~~~~~------~~~l-~----------~---~~~-------~g 130 (275)
.. .+. ..+.++++ .+.||+||+|||+. |. +|+.+ ...+ . . +.. +|
T Consensus 81 ~v--~v~-~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G 156 (456)
T 1lqt_A 81 NV--VVG-EHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNG 156 (456)
T ss_dssp SC--CBT-TTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCS
T ss_pred eE--EEC-CEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCC
Confidence 31 222 23444333 47899999999996 33 44422 1111 0 0 111 78
Q ss_pred cchhhHHHHHhhh-------------------CCCCEEEEEeCCCcccCcCC-------------------cch------
Q 023957 131 PTGVELAGEIAVD-------------------FPEKKVTLVHKGSRLLEFIG-------------------PKA------ 166 (275)
Q Consensus 131 ~~~~~~a~~l~~~-------------------~~~~~v~~~~~~~~~~~~~~-------------------~~~------ 166 (275)
.+|+|+|..+... ....+++++.+...+...+. .++
T Consensus 157 ~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~ 236 (456)
T 1lqt_A 157 NVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDE 236 (456)
T ss_dssp HHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHH
T ss_pred HHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhh
Confidence 8999999998842 12359999999876543222 111
Q ss_pred ------------HHHHHHHHHh------CCCEEEcCceeeeecCCCCCceEEcC----------------CC--cEEeec
Q 023957 167 ------------GDKTRDWLIS------KKVDVKLGERVNLDSVSEGSDTYLTS----------------TG--DTINAD 210 (275)
Q Consensus 167 ------------~~~~~~~~~~------~gv~i~~~~~v~~i~~~~~~~~v~~~----------------~g--~~~~~d 210 (275)
.+.+.+.+++ +||++++++.+.++..++....+.+. +| ++++||
T Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d 316 (456)
T 1lqt_A 237 DAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQ 316 (456)
T ss_dssp HHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECS
T ss_pred hhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcC
Confidence 2344455555 78999999999999865432234442 34 469999
Q ss_pred EEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 211 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 211 ~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
.||+++|++|+. + . +++++++|++.+|++++.++.|+|||+|||+..|.
T Consensus 317 ~vi~a~G~~p~~-l---~--gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~ 365 (456)
T 1lqt_A 317 LVVRSVGYRGVP-T---P--GLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPT 365 (456)
T ss_dssp EEEECSCEECCC-C---T--TSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSC
T ss_pred EEEEccccccCC-C---C--CCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCc
Confidence 999999999976 2 2 34677889999999999558999999999997554
No 80
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.93 E-value=3.2e-26 Score=198.13 Aligned_cols=233 Identities=18% Similarity=0.157 Sum_probs=152.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccc-cC-Cccccccccccc-ccccccEEE-EeeeeEe
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM-VE-PSFGKRSVINHT-DYLVNGRIV-ASPAINI 87 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ 87 (275)
++||+|||||++|+++|++|+ . ++|+|||+++.+|+.+...... .. .....+...... .+..++++. ...+..+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGV 186 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEECCC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEEEE
Confidence 479999999999999999997 6 9999999999887654432110 00 000000000111 112244442 2333333
Q ss_pred ec--CeE--Ee-cCCe--EEeCCEEEEccCCCCCCCchHHHHHHHHhcCCcchhhHHHHHhh---hCCCCEEEEEeCCCc
Q 023957 88 TE--NEV--LT-AEGR--RVVYDYLVIATGHKDPVPKTRTERLNQYQAGGPTGVELAGEIAV---DFPEKKVTLVHKGSR 157 (275)
Q Consensus 88 ~~--~~v--~~-~~~~--~~~~~~lilatG~~~~~~~~~~~~l~~~~~~g~~~~~~a~~l~~---~~~~~~v~~~~~~~~ 157 (275)
+. ..+ .. +++. .+.||++++|||+.|..|.++...+ .+......+..+.. ..++.++.++..+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~-----~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~ 261 (493)
T 1y56_A 187 FDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDM-----PGVFRRDFALEVMNVWEVAPGRKVAVTGSKAD 261 (493)
T ss_dssp EECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTS-----TTEEEHHHHHHHHHTSCBCSCSEEEEESTTHH
T ss_pred EcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCC-----CCEEEcHHHHHHHHhcccCCCCEEEEECCCHH
Confidence 32 222 11 3443 6899999999999876654421111 11222222222221 134567766643221
Q ss_pred ccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCC
Q 023957 158 LLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTH 237 (275)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~ 237 (275)
.+.+.+++.|++++.++.|.+++.+++...+.+.+|+++++|.||+++|.+|+.+++...++.+.++++
T Consensus 262 -----------gle~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~ 330 (493)
T 1y56_A 262 -----------EVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRG 330 (493)
T ss_dssp -----------HHHHHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETT
T ss_pred -----------HHHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCC
Confidence 122667788999999999999987655556778889899999999999999999899888876666678
Q ss_pred CceE-eCCCccccCCCCeEEeccccCCC
Q 023957 238 GMLM-VDENLRVKGQKNIFAIGDITDIR 264 (275)
Q Consensus 238 g~i~-v~~~~~~~~~~~v~a~Gd~~~~~ 264 (275)
|++. ||++++ +.|+||++|||+..+
T Consensus 331 g~i~~vd~~~~--s~~~vya~GD~~~~~ 356 (493)
T 1y56_A 331 YYSPVLDEYHR--IKDGIYVAGSAVSIK 356 (493)
T ss_dssp EEEECCCTTSE--EETTEEECSTTTCCC
T ss_pred ceeeccccccC--cCCCEEEEeccCCcc
Confidence 8888 899988 689999999999764
No 81
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.92 E-value=1.2e-26 Score=208.32 Aligned_cols=230 Identities=17% Similarity=0.116 Sum_probs=153.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccc---cccEEEEeeeeE
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL---VNGRIVASPAIN 86 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 86 (275)
...+||+|||||++||+||+.|+ +|++|+|||+++.+|+.+....................... .++++...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~---- 464 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRE---- 464 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESS----
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEEC----
Confidence 34689999999999999999998 69999999999888755432111111100011111111111 12333222
Q ss_pred eecCeEEecCCeEEeCCEEEEccCCCCC-----------CCchH------H-HHHHHH-hc----------CCcchhhHH
Q 023957 87 ITENEVLTAEGRRVVYDYLVIATGHKDP-----------VPKTR------T-ERLNQY-QA----------GGPTGVELA 137 (275)
Q Consensus 87 ~~~~~v~~~~~~~~~~~~lilatG~~~~-----------~~~~~------~-~~l~~~-~~----------~g~~~~~~a 137 (275)
..+...++..+.||++++|||+.|. +|+.+ . +.+... .. +|.+++++|
T Consensus 465 ---~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A 541 (690)
T 3k30_A 465 ---SPMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVA 541 (690)
T ss_dssp ---CCCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHH
T ss_pred ---CeecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHH
Confidence 1222333456789999999998732 33321 1 111110 00 467899999
Q ss_pred HHHhhhCCCCEEEEEeCCCcccCcCC-cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEE---cCCCcEEeecEEE
Q 023957 138 GEIAVDFPEKKVTLVHKGSRLLEFIG-PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYL---TSTGDTINADCHF 213 (275)
Q Consensus 138 ~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~---~~~g~~~~~d~vv 213 (275)
..+. ..+.+++++++.+.+.+... +.....+.+.+++.||+++++++|++++.++ ..+. ..+++++++|.||
T Consensus 542 ~~L~--~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~~~~~~~~~~i~aD~VV 617 (690)
T 3k30_A 542 ELLA--QKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGG--VTVRDTYASIERELECDAVV 617 (690)
T ss_dssp HHHH--HTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTE--EEEEETTTCCEEEEECSEEE
T ss_pred HHHH--hCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCe--EEEEEccCCeEEEEECCEEE
Confidence 9998 45889999999888765432 4567788889999999999999999998543 3333 2355689999999
Q ss_pred EcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 214 LCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 214 ~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
+|+|++|+..++...+. .+. +| +.|+||++|||+..+.
T Consensus 618 ~A~G~~p~~~l~~~l~~------~~~-------~t-~~~~VyaiGD~~~~~~ 655 (690)
T 3k30_A 618 MVTARLPREELYLDLVA------RRD-------AG-EIASVRGIGDAWAPGT 655 (690)
T ss_dssp EESCEEECCHHHHHHHH------HHH-------HT-SCSEEEECGGGTSCBC
T ss_pred ECCCCCCChHHHHHHhh------hhc-------cc-CCCCEEEEeCCCchhh
Confidence 99999999887765432 111 55 8999999999998654
No 82
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.92 E-value=1.2e-24 Score=186.95 Aligned_cols=228 Identities=15% Similarity=0.210 Sum_probs=146.6
Q ss_pred CeEEEEcCChHHHHHHHHhh----cCCc---EEEEcCCCCccccccccc--cc-----------c---------------
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ----FSAD---VTLIDPKEYFEITWASLR--AM-----------V--------------- 58 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~----~g~~---v~vie~~~~~~~~~~~~~--~~-----------~--------------- 58 (275)
+||+|||||++|+++|..|+ .|++ |+|||+++.+|+.|.... +. .
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 69999999999999999985 4899 999999988876654211 00 0
Q ss_pred CCcccc------ccccc-------cccccc--ccE--EE-EeeeeEee--cC----eEEecC---C--eEEeCCEEEEcc
Q 023957 59 EPSFGK------RSVIN-------HTDYLV--NGR--IV-ASPAINIT--EN----EVLTAE---G--RRVVYDYLVIAT 109 (275)
Q Consensus 59 ~~~~~~------~~~~~-------~~~~~~--~~~--~~-~~~~~~~~--~~----~v~~~~---~--~~~~~~~lilat 109 (275)
...+.. ..... ...+.. ++. +. ...+..++ .. .+.+.+ + ..+.||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 000000 00000 000000 222 22 33444443 22 455543 3 568899999999
Q ss_pred C--CCCCCCchHH-HH-------------HHHHhc-------CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcch
Q 023957 110 G--HKDPVPKTRT-ER-------------LNQYQA-------GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKA 166 (275)
Q Consensus 110 G--~~~~~~~~~~-~~-------------l~~~~~-------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~ 166 (275)
| +.|..|.++. +. ...+.. +|.+|+|+|..+. ..+.+++++.+.+.++....
T Consensus 163 G~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~--~~g~~V~li~~~~~~~~~~~--- 237 (464)
T 2xve_A 163 GHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCY--KYGAKKLISCYRTAPMGYKW--- 237 (464)
T ss_dssp CSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHH--HTTCSEEEEECSSCCCCCCC---
T ss_pred CCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHH--HhCCeEEEEEECCCCCCCCC---
Confidence 9 6666554321 00 001111 8999999999998 46889999998877654211
Q ss_pred HHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCce-EeCCC
Q 023957 167 GDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGML-MVDEN 245 (275)
Q Consensus 167 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i-~v~~~ 245 (275)
..||+++ ..|++++.+ .+++.||+++++|.||+|+|++|+.+++... +++.++.++++ ....+
T Consensus 238 ---------~~~V~~~--~~V~~i~~~----~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~-~gl~~~~~~~v~~~~~~ 301 (464)
T 2xve_A 238 ---------PENWDER--PNLVRVDTE----NAYFADGSSEKVDAIILCTGYIHHFPFLNDD-LRLVTNNRLWPLNLYKG 301 (464)
T ss_dssp ---------CTTEEEC--SCEEEECSS----EEEETTSCEEECSEEEECCCBCCCCTTBCTT-TCCCCCSSSCCSSEETT
T ss_pred ---------CCceEEc--CCeEEEeCC----EEEECCCCEEeCCEEEECCCCCCCCCCcCcc-cccccCCCcccccccce
Confidence 1477776 678888632 4778899999999999999999998888752 23355555465 22222
Q ss_pred -ccccCCCCeEEeccccCC
Q 023957 246 -LRVKGQKNIFAIGDITDI 263 (275)
Q Consensus 246 -~~~~~~~~v~a~Gd~~~~ 263 (275)
+++ +.|+||++|||+..
T Consensus 302 ~~~t-~~p~i~aiGd~~~~ 319 (464)
T 2xve_A 302 VVWE-DNPKFFYIGMQDQW 319 (464)
T ss_dssp TEES-SSTTEEECSCSCCS
T ss_pred EecC-CCCCEEEEeCcccc
Confidence 455 89999999998763
No 83
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.92 E-value=6.7e-26 Score=210.78 Aligned_cols=241 Identities=16% Similarity=0.163 Sum_probs=156.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCccccccccccccC-Ccccccccccccccc--cccEEEEeeeeE
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWASLRAMVE-PSFGKRSVINHTDYL--VNGRIVASPAIN 86 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 86 (275)
..+||+||||||||++||+.|+ .|+ +|+|||+++.+|+... ..+. ............+++ .++++..+..+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~---~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 262 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLST---SEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLS 262 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHH---HTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccc---ccCCcccCCHHHHHHHHHHHHHCCcEEEcccEec
Confidence 3579999999999999999998 698 7999999987764321 1111 011111111111111 145555544332
Q ss_pred eecCeEEecCCeEEeCCEEEEccCCC-CCCCc----hH--------HHHHHHH---------------hc---------C
Q 023957 87 ITENEVLTAEGRRVVYDYLVIATGHK-DPVPK----TR--------TERLNQY---------------QA---------G 129 (275)
Q Consensus 87 ~~~~~v~~~~~~~~~~~~lilatG~~-~~~~~----~~--------~~~l~~~---------------~~---------~ 129 (275)
.+.+.++++..+.||+|++|||+. |..++ .. .+.+... .. +
T Consensus 263 --~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGg 340 (1025)
T 1gte_A 263 --ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGA 340 (1025)
T ss_dssp --TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECS
T ss_pred --cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECC
Confidence 123444444457899999999984 54322 11 1122211 11 7
Q ss_pred CcchhhHHHHHhhhCCC-CEEEEEeCCC-cccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEcC----
Q 023957 130 GPTGVELAGEIAVDFPE-KKVTLVHKGS-RLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTS---- 202 (275)
Q Consensus 130 g~~~~~~a~~l~~~~~~-~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~---- 202 (275)
|.+|+|+|..+.. .+ .+|+++.+.+ ..++..+.+ .+.+++.|++++.++.+.++..+++.+ .+.+.
T Consensus 341 G~~g~e~A~~~~~--~G~~~Vtvv~r~~~~~~~~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~ 413 (1025)
T 1gte_A 341 GDTAFDCATSALR--CGARRVFLVFRKGFVNIRAVPEE-----VELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQ 413 (1025)
T ss_dssp SHHHHHHHHHHHH--TTCSEEEEECSSCGGGCCSCHHH-----HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ChHHHHHHHHHHH--cCCCEEEEEEecChhhCCCCHHH-----HHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEE
Confidence 8899999998873 45 4899999887 333433222 245677899999999998887543332 23321
Q ss_pred --CC---------cEEeecEEEEcCCCCC-CchhhcccccccccCCCCceEeCC-CccccCCCCeEEeccccCCCCC
Q 023957 203 --TG---------DTINADCHFLCTGKPV-GSDWLKDTILKDSLDTHGMLMVDE-NLRVKGQKNIFAIGDITDIRVS 266 (275)
Q Consensus 203 --~g---------~~~~~d~vv~a~G~~~-~~~~~~~~~~~~~~~~~g~i~v~~-~~~~~~~~~v~a~Gd~~~~~~~ 266 (275)
+| .++++|.||+|+|..| +..++... .+++++++|++.||+ +++| +.|+|||+|||+..+..
T Consensus 414 ~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~-~gl~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~~~~ 488 (1025)
T 1gte_A 414 DETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEAL-SPIKFNRWDLPEVDPETMQT-SEPWVFAGGDIVGMANT 488 (1025)
T ss_dssp CTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHT-TTSCBCTTSSBCCCTTTCBC-SSTTEEECSGGGCSCCC
T ss_pred cCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcc-cCceECCCCCEEECCCCCcc-CCCCEEEeCCCCCCchH
Confidence 22 3689999999999976 45565542 133677889999997 7998 89999999999986543
No 84
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.92 E-value=8.2e-25 Score=202.25 Aligned_cols=234 Identities=18% Similarity=0.148 Sum_probs=153.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccc-cccCCccccccccccc-c--cccccEEEEe-eeeE
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR-AMVEPSFGKRSVINHT-D--YLVNGRIVAS-PAIN 86 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~-~~~~ 86 (275)
++||+|||||+||++||..|+ .|++|+|||+++.+|+.+...+ ..+............. + .+.++++... .+..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 579999999999999999998 6999999999988775443210 0111000000000000 0 0123444322 2333
Q ss_pred eecC-------------eEEe------cCCeEEeCCEEEEccCCCCCCCchH---------HHH----HHHH---h-c--
Q 023957 87 ITEN-------------EVLT------AEGRRVVYDYLVIATGHKDPVPKTR---------TER----LNQY---Q-A-- 128 (275)
Q Consensus 87 ~~~~-------------~v~~------~~~~~~~~~~lilatG~~~~~~~~~---------~~~----l~~~---~-~-- 128 (275)
++.. .+.. .++..+.||++|+|||+.|..|.++ ... +..+ . +
T Consensus 208 i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~v 287 (965)
T 2gag_A 208 SYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARI 287 (965)
T ss_dssp EETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSE
T ss_pred eecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeE
Confidence 3221 1111 1124689999999999975543321 111 2211 1 1
Q ss_pred ----CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCC--CCCceEEcC
Q 023957 129 ----GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS--EGSDTYLTS 202 (275)
Q Consensus 129 ----~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~--~~~~~v~~~ 202 (275)
+|.+++|+|..+. ..+.+++++++.+.+.. . .+.+++.||+++.++.|.+++.+ ++...+++.
T Consensus 288 vViGgG~~g~E~A~~L~--~~G~~Vtvv~~~~~~~~-------~--~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~ 356 (965)
T 2gag_A 288 AVATTNDSAYELVRELA--ATGGVVAVIDARSSISA-------A--AAQAVADGVQVISGSVVVDTEADENGELSAIVVA 356 (965)
T ss_dssp EEEESSTTHHHHHHHHG--GGTCCSEEEESCSSCCH-------H--HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEE
T ss_pred EEEcCCHHHHHHHHHHH--HcCCcEEEEECCCccch-------h--HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEE
Confidence 8889999999998 45777999999877532 1 56678899999999999999863 332245544
Q ss_pred C-------C--cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccc----cCCCCeEEeccccCCCC
Q 023957 203 T-------G--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRV----KGQKNIFAIGDITDIRV 265 (275)
Q Consensus 203 ~-------g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~----~~~~~v~a~Gd~~~~~~ 265 (275)
+ | ++++||.|++++|.+|+..++... .+.+.+|++++. ++.|+|||+|||+..+.
T Consensus 357 ~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~--------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~ 424 (965)
T 2gag_A 357 ELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR--------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLD 424 (965)
T ss_dssp EECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT--------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCS
T ss_pred eccccCCCCceEEEEcCEEEECCCcCcChHHHHhC--------CCcEEEcCcccccccCCCCCCEEEEEecCCchh
Confidence 3 5 589999999999999998876543 367888887761 38999999999998764
No 85
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.92 E-value=2.2e-26 Score=207.44 Aligned_cols=235 Identities=17% Similarity=0.089 Sum_probs=149.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCccccccccccc-ccccccEEEEeeeeEee
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHT-DYLVNGRIVASPAINIT 88 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 88 (275)
...+||+|||||+||++||+.|+ +|++|+|||+++.+|+.+.......... .......+. ............++.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~-~~~~~~~~~~~~i~~~~~~~~~~v~i~ 465 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLG-EWSYHRDYRETQITKLLKKNKESQLAL 465 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCG-GGHHHHHHHHHHHHHHHHHSTTCEEEC
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChH-HHHHHHHHHHHHHHHhhcccCCceEEE
Confidence 44689999999999999999998 6999999999988775443211110000 000000000 00000000000112222
Q ss_pred c-CeEEecCCeEEeCCEEEEccCCCC--------C---CCchH--------H-HHHHHH--hc---------CCcchhhH
Q 023957 89 E-NEVLTAEGRRVVYDYLVIATGHKD--------P---VPKTR--------T-ERLNQY--QA---------GGPTGVEL 136 (275)
Q Consensus 89 ~-~~v~~~~~~~~~~~~lilatG~~~--------~---~~~~~--------~-~~l~~~--~~---------~g~~~~~~ 136 (275)
. ..+.++++..+.||+||+|||+.| . +|+.. . +.+... .. +|.+|+|+
T Consensus 466 ~~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~ 545 (729)
T 1o94_A 466 GQKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSL 545 (729)
T ss_dssp SCCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHH
T ss_pred eCeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHH
Confidence 1 234444445678999999999872 2 33321 0 111110 00 56889999
Q ss_pred HHHHhhhCCCCEEEEEeCCCcccC--cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEE--cCCC-cE-----
Q 023957 137 AGEIAVDFPEKKVTLVHKGSRLLE--FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYL--TSTG-DT----- 206 (275)
Q Consensus 137 a~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~--~~~g-~~----- 206 (275)
|..+. ..+.+|+++.+.+ +.+ ..+.. ...+.+.+++.||+++.++.+++++.+ ...+. ..++ +.
T Consensus 546 A~~l~--~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~--~v~~~~~~~~~~~~~~~~~ 619 (729)
T 1o94_A 546 AEKLA--TAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPG--RMEIYNIWGDGSKRTYRGP 619 (729)
T ss_dssp HHHHH--HTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETT--EEEEEETTCSCSCCCCCCT
T ss_pred HHHHH--HcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECC--eEEEEEecCCceEEecccc
Confidence 99998 4588999999988 543 12222 466778888999999999999999743 23332 2233 22
Q ss_pred -------------EeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCC
Q 023957 207 -------------INADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 263 (275)
Q Consensus 207 -------------~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~ 263 (275)
+++|.||+|+|.+|+..++..... .+|++++| +.|+|||+|||+..
T Consensus 620 ~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~----------~vd~~~~t-~~~~VyAiGD~~~~ 678 (729)
T 1o94_A 620 GVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKA----------RESEWAEN-DIKGIYLIGDAEAP 678 (729)
T ss_dssp TSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHH----------TGGGTGGG-TCCEEEECGGGTSC
T ss_pred cccccccCCcceeeeCCEEEECCCCCCChHHHHHHhh----------hccccccc-CCCCeEEEeCccch
Confidence 999999999999999887654321 26788888 89999999999974
No 86
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.92 E-value=9.9e-25 Score=186.85 Aligned_cols=241 Identities=15% Similarity=0.120 Sum_probs=151.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cC--CcEEEEcCCCCccccccccccccCCccc--ccccccccccc--cccEEEEeee
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FS--ADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTDYL--VNGRIVASPA 84 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g--~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~ 84 (275)
..+||+|||||++|+++|..|+ .| ++|+|||+++.+++.+. ....+.+. ........+++ .++++.....
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~---~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 81 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR---FGVAPDHPEVKNVINTFTQTARSDRCAFYGNVE 81 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH---HTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee---cccCCCCccHHHHHHHHHHHHHhCCcEEEeeeE
Confidence 3579999999999999999997 46 99999999987764331 11111111 11111111111 1344443322
Q ss_pred eEeecCeEEecCCeEEeCCEEEEccCCCC-C---CCchH------HHHH-H-------------HHhc-------CCcch
Q 023957 85 INITENEVLTAEGRRVVYDYLVIATGHKD-P---VPKTR------TERL-N-------------QYQA-------GGPTG 133 (275)
Q Consensus 85 ~~~~~~~v~~~~~~~~~~~~lilatG~~~-~---~~~~~------~~~l-~-------------~~~~-------~g~~~ 133 (275)
+ . ..+.+++ ..+.||+||+|||+.+ . +|+.+ ...+ . .+.. +|.+|
T Consensus 82 v--~-~~V~~~~-~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g 157 (460)
T 1cjc_A 82 V--G-RDVTVQE-LQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVA 157 (460)
T ss_dssp B--T-TTBCHHH-HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHH
T ss_pred E--e-eEEEecc-ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHH
Confidence 2 1 2233322 2468999999999883 3 44321 1111 1 1111 88899
Q ss_pred hhHHHHHhh-------------------hCCCCEEEEEeCCCccc--------------CcCC-----cc----------
Q 023957 134 VELAGEIAV-------------------DFPEKKVTLVHKGSRLL--------------EFIG-----PK---------- 165 (275)
Q Consensus 134 ~~~a~~l~~-------------------~~~~~~v~~~~~~~~~~--------------~~~~-----~~---------- 165 (275)
+|+|..|.. .....+++++.+...+. +..+ .+
T Consensus 158 ~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~ 237 (460)
T 1cjc_A 158 LDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKE 237 (460)
T ss_dssp HHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTT
T ss_pred HHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhh
Confidence 999999873 12234899999887541 1100 01
Q ss_pred -------hHHHHHHHHHh--------------CCCEEEcCceeeeecCCC-C-Cc-eEEcC---------------CC--
Q 023957 166 -------AGDKTRDWLIS--------------KKVDVKLGERVNLDSVSE-G-SD-TYLTS---------------TG-- 204 (275)
Q Consensus 166 -------~~~~~~~~~~~--------------~gv~i~~~~~v~~i~~~~-~-~~-~v~~~---------------~g-- 204 (275)
+.+.+.+.+++ +||++++++.+.+|..++ + .+ .+.+. +|
T Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~ 317 (460)
T 1cjc_A 238 AARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDV 317 (460)
T ss_dssp SCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCce
Confidence 22344445555 789999999999997653 2 22 23332 34
Q ss_pred cEEeecEEEEcCCCCCCchhhccccccc-ccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 205 DTINADCHFLCTGKPVGSDWLKDTILKD-SLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 205 ~~~~~d~vv~a~G~~~~~~~~~~~~~~~-~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
++++||.||+++|++|+. + .++ +++++|++.||+++|+.+.|+|||+|||+..|.
T Consensus 318 ~~i~~d~Vi~a~G~~p~~-l-----~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~ 373 (460)
T 1cjc_A 318 EDLPCGLVLSSIGYKSRP-I-----DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPT 373 (460)
T ss_dssp EEEECSEEEECCCEECCC-C-----CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTT
T ss_pred EEEEcCEEEECCCCCCCC-C-----CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCC
Confidence 579999999999999976 3 234 567789999999999933799999999996553
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.91 E-value=6.2e-24 Score=181.99 Aligned_cols=230 Identities=17% Similarity=0.244 Sum_probs=145.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCCcccccccccccc---------------------------CCc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEYFEITWASLRAMV---------------------------EPS 61 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~~~~~~~~~~~~~~---------------------------~~~ 61 (275)
..+||+|||||++|+++|+.|+ .|. +|+|||+++.+|+.|....... ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 4589999999999999999998 588 9999999987775553321000 000
Q ss_pred c-------------------ccc--------ccccc-ccccc--ccEE-EEeeeeEeec--C--eEEecC---Ce---EE
Q 023957 62 F-------------------GKR--------SVINH-TDYLV--NGRI-VASPAINITE--N--EVLTAE---GR---RV 100 (275)
Q Consensus 62 ~-------------------~~~--------~~~~~-~~~~~--~~~~-~~~~~~~~~~--~--~v~~~~---~~---~~ 100 (275)
+ ... .+..+ ..+.. +..+ ...++..++. . .+.+.+ +. .+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~ 164 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKD 164 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEE
Confidence 0 000 00000 00000 1112 2334444432 2 455543 55 78
Q ss_pred eCCEEEEccCC--CCCCCchHH-HHHH-----------HHh------c-------CCcchhhHHHHHhhhCCCCE-EEEE
Q 023957 101 VYDYLVIATGH--KDPVPKTRT-ERLN-----------QYQ------A-------GGPTGVELAGEIAVDFPEKK-VTLV 152 (275)
Q Consensus 101 ~~~~lilatG~--~~~~~~~~~-~~l~-----------~~~------~-------~g~~~~~~a~~l~~~~~~~~-v~~~ 152 (275)
.||+||+|||. .|.+|.++. +.+. .+. . +|.+|+|+|..+. ..+.+ ++++
T Consensus 165 ~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~--~~~~~~V~l~ 242 (447)
T 2gv8_A 165 IFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLT--PVAKHPIYQS 242 (447)
T ss_dssp EESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHT--TTSCSSEEEE
T ss_pred EeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHH--HHhCCcEEEE
Confidence 99999999998 565554321 1110 010 0 8899999999998 55777 9999
Q ss_pred eCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcE-EeecEEEEcCCCCCCchh-----hc
Q 023957 153 HKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDT-INADCHFLCTGKPVGSDW-----LK 226 (275)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~-~~~d~vv~a~G~~~~~~~-----~~ 226 (275)
.+.+.+ ++..||++ +..|+++..++ ..|++.||+. +++|.||+|+|++|+.++ +.
T Consensus 243 ~r~~~~---------------l~~~~i~~--~~~v~~~~~~~--~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~ 303 (447)
T 2gv8_A 243 LLGGGD---------------IQNESLQQ--VPEITKFDPTT--REIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLK 303 (447)
T ss_dssp CTTCCS---------------CBCSSEEE--ECCEEEEETTT--TEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCC
T ss_pred eCCCCc---------------CCCCCeEE--ecCeEEEecCC--CEEEECCCCEeccCCEEEECCCCCcCCCCCcccccc
Confidence 987654 23456664 56788885433 3678889986 789999999999999888 66
Q ss_pred ccccccccCCCCceEeCCCccc--cCCCCeEEeccccCCC
Q 023957 227 DTILKDSLDTHGMLMVDENLRV--KGQKNIFAIGDITDIR 264 (275)
Q Consensus 227 ~~~~~~~~~~~g~i~v~~~~~~--~~~~~v~a~Gd~~~~~ 264 (275)
..+..+ ..++.+.++.+.++ ++.|++|++||+....
T Consensus 304 ~~~~~i--~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~ 341 (447)
T 2gv8_A 304 SPETKL--IDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV 341 (447)
T ss_dssp STTTCC--CSSSSSCCSEETTTEETTCTTEEESSCCBSSC
T ss_pred cccCce--ecCCCcccccccccccCCCCcEEEEecccccc
Confidence 543222 23455555544331 3899999999997653
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.89 E-value=6.2e-23 Score=178.88 Aligned_cols=242 Identities=16% Similarity=0.167 Sum_probs=150.5
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c-CCcEEEEcCCCCcccccccc--ccc---c-----CCcccc---------------c
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFEITWASL--RAM---V-----EPSFGK---------------R 65 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~-g~~v~vie~~~~~~~~~~~~--~~~---~-----~~~~~~---------------~ 65 (275)
++||+|||||++|+++|+.|+ + |.+|+|||+++.+|+.|... ++. . ...+.. .
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999998 4 99999999998887554321 110 0 000000 0
Q ss_pred ccccc-ccccc--cc--EE-EEeeeeEee--cC----eEEecCCeEEeCCEEEEccC--CCCCCCchHHHHHHHHhc---
Q 023957 66 SVINH-TDYLV--NG--RI-VASPAINIT--EN----EVLTAEGRRVVYDYLVIATG--HKDPVPKTRTERLNQYQA--- 128 (275)
Q Consensus 66 ~~~~~-~~~~~--~~--~~-~~~~~~~~~--~~----~v~~~~~~~~~~~~lilatG--~~~~~~~~~~~~l~~~~~--- 128 (275)
.+..+ ..... ++ .+ ...++..++ .. .+.+.+|..+.||.||+||| +.|..|.++ +++.+..
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ip--G~~~f~g~~~ 165 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLP--GLDTFEGETI 165 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCT--TGGGCCSEEE
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCC--CccccCCCEE
Confidence 00000 00000 11 22 123333332 22 67788888899999999999 456655432 1121110
Q ss_pred --------------------CCcchhhHHHHHhhhCCCCEEEEEeCCCcc-cCcCCcchHHHHHHHHH------------
Q 023957 129 --------------------GGPTGVELAGEIAVDFPEKKVTLVHKGSRL-LEFIGPKAGDKTRDWLI------------ 175 (275)
Q Consensus 129 --------------------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~------------ 175 (275)
+|.+|+|+|..+. ..+.+++++++.+.+ ++..++.+.+.+.+.++
T Consensus 166 ~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~--~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~ 243 (540)
T 3gwf_A 166 HTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLA--PEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKN 243 (540)
T ss_dssp EGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHT--TTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHT
T ss_pred EeecCCCccccccceEEEECCCchHHHHHHHHH--hhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHh
Confidence 8899999999998 568999999999873 34333332222211111
Q ss_pred --------------------------------------------------------------------------------
Q 023957 176 -------------------------------------------------------------------------------- 175 (275)
Q Consensus 176 -------------------------------------------------------------------------------- 175 (275)
T Consensus 244 ~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~ 323 (540)
T 3gwf_A 244 SAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPK 323 (540)
T ss_dssp SSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCC
T ss_pred ccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCC
Confidence
Q ss_pred ------------------hCCCEEEc--CceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhccccc----c
Q 023957 176 ------------------SKKVDVKL--GERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTIL----K 231 (275)
Q Consensus 176 ------------------~~gv~i~~--~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~----~ 231 (275)
+.+|+++. ...|.+|..+ .|++.||+++++|.||+|||+.++..++....+ +
T Consensus 324 ~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~----gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G 399 (540)
T 3gwf_A 324 GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK----GVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDG 399 (540)
T ss_dssp SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS----EEEETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGG
T ss_pred CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC----eEEcCCCCEEECCEEEECCccCccccCcCcceEECCCC
Confidence 34778875 6788888753 488999999999999999999987644433221 1
Q ss_pred cccCC--CCceEeCCCccccCCCCeEEe-ccccC
Q 023957 232 DSLDT--HGMLMVDENLRVKGQKNIFAI-GDITD 262 (275)
Q Consensus 232 ~~~~~--~g~i~v~~~~~~~~~~~v~a~-Gd~~~ 262 (275)
..+++ .+.+.....+.+++.||+|.+ |..+.
T Consensus 400 ~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~ 433 (540)
T 3gwf_A 400 LHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP 433 (540)
T ss_dssp CBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB
T ss_pred cCHHHhhccChhhccccccCCCCceEEEecCCCC
Confidence 11111 122334444666789999999 87654
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.89 E-value=4.2e-23 Score=184.93 Aligned_cols=223 Identities=15% Similarity=0.179 Sum_probs=144.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEEeeeeEe
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASPAINI 87 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (275)
..++||+|||||+||++||..|+ +|++|+|||+++.+|+.+....................+.+ .++++..+..+.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 449 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT- 449 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCC-
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEec-
Confidence 34689999999999999999998 69999999999888765432111111000000011111111 134444332211
Q ss_pred ecCeEEecCCeEE-eCCEEEEccCCCCCCCchHH----------HHHHHHh--c-------CCcchhhHHHHHhhhC---
Q 023957 88 TENEVLTAEGRRV-VYDYLVIATGHKDPVPKTRT----------ERLNQYQ--A-------GGPTGVELAGEIAVDF--- 144 (275)
Q Consensus 88 ~~~~v~~~~~~~~-~~~~lilatG~~~~~~~~~~----------~~l~~~~--~-------~g~~~~~~a~~l~~~~--- 144 (275)
...+ .||+||+|||+.|..|.++. +.+.... . +|.+|+|+|..+....
T Consensus 450 ---------~~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~v 520 (671)
T 1ps9_A 450 ---------ADQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGEST 520 (671)
T ss_dssp ---------SSSSCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCG
T ss_pred ---------HHHhhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCc
Confidence 1124 89999999999866553221 1111100 0 7889999999987321
Q ss_pred --------------------------------CCCEEEEEeCCCccc-CcCCcchHHHHHHHHHhCCCEEEcCceeeeec
Q 023957 145 --------------------------------PEKKVTLVHKGSRLL-EFIGPKAGDKTRDWLISKKVDVKLGERVNLDS 191 (275)
Q Consensus 145 --------------------------------~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 191 (275)
...+++++.+.+..+ ..+++.....+.+.+++.||++++++.|++++
T Consensus 521 tv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~ 600 (671)
T 1ps9_A 521 SQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKID 600 (671)
T ss_dssp GGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEE
T ss_pred ccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEe
Confidence 014567777765443 34555666777888999999999999999997
Q ss_pred CCCCCceEEcCCC--cEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCCCccccCCCCeEEeccccCCCC
Q 023957 192 VSEGSDTYLTSTG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 192 ~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
.+ .+.+. .+| +++++|.||+|+|++|+..++.... . ..++||++|||+....
T Consensus 601 ~~--~v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l~------------------~-~g~~v~aiGD~~~~~~ 654 (671)
T 1ps9_A 601 DD--GLHVV-INGETQVLAVDNVVICAGQEPNRALAQPLI------------------D-SGKTVHLIGGCDVAME 654 (671)
T ss_dssp TT--EEEEE-ETTEEEEECCSEEEECCCEEECCTTHHHHH------------------T-TTCCEEECGGGTCCSS
T ss_pred CC--eEEEe-cCCeEEEEeCCEEEECCCccccHHHHHHHH------------------h-cCCCEEEECCcCccCc
Confidence 42 33343 567 5799999999999999887765321 1 2468999999988764
No 90
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.86 E-value=5.7e-21 Score=143.65 Aligned_cols=93 Identities=18% Similarity=0.069 Sum_probs=78.6
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcccccccccCCCCceEeCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDE 244 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~i~v~~ 244 (275)
.+.+.+.+.+++.|++++.+ +|++++.+++.+.+.+++| ++++|.||+|+|..|+ +++..++ +++ +|++.||+
T Consensus 57 ~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~--~~~-~g~i~vd~ 129 (180)
T 2ywl_A 57 ELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT--LPSLLGL--TRR-GAYIDTDE 129 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH--HHHHHTC--CEE-TTEECCCT
T ss_pred HHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC--ccccCCC--Ccc-CceEEeCC
Confidence 46677778888899999999 9999987766777888888 7999999999999974 4444444 566 89999999
Q ss_pred CccccCCCCeEEeccccCCCC
Q 023957 245 NLRVKGQKNIFAIGDITDIRV 265 (275)
Q Consensus 245 ~~~~~~~~~v~a~Gd~~~~~~ 265 (275)
+++| +.|+|||+|||+..+.
T Consensus 130 ~~~t-~~~~i~a~GD~~~~~~ 149 (180)
T 2ywl_A 130 GGRT-SYPRVYAAGVARGKVP 149 (180)
T ss_dssp TCBC-SSTTEEECGGGGTCCS
T ss_pred CCCc-CCCCEEEeecccCcch
Confidence 9999 8999999999998765
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.85 E-value=3.7e-21 Score=167.88 Aligned_cols=145 Identities=21% Similarity=0.250 Sum_probs=88.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccc--ccccc------------CCc----cc-cccccc--
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS--LRAMV------------EPS----FG-KRSVIN-- 69 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~--~~~~~------------~~~----~~-~~~~~~-- 69 (275)
.++||+|||||++|+++|+.|+ .|.+|+|||+++.+|+.|.. .++.. .+. .. ......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 4589999999999999999998 69999999999888765521 11000 000 00 000000
Q ss_pred -ccccc----c--cc--EE-EEeeeeEe--ecC----eEEecCCeEEeCCEEEEccC--CCCCCCchHH-HH--------
Q 023957 70 -HTDYL----V--NG--RI-VASPAINI--TEN----EVLTAEGRRVVYDYLVIATG--HKDPVPKTRT-ER-------- 122 (275)
Q Consensus 70 -~~~~~----~--~~--~~-~~~~~~~~--~~~----~v~~~~~~~~~~~~lilatG--~~~~~~~~~~-~~-------- 122 (275)
...++ . ++ .+ ...++..+ +.. .+.+.+|.++.||.||+||| +.|..|.++. +.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h~ 167 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFHS 167 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEEc
Confidence 00000 0 11 11 12233333 222 77888888999999999999 6655444321 00
Q ss_pred --H-HH-------H--hc-------CCcchhhHHHHHhhhCCCCEEEEEeCCCcc
Q 023957 123 --L-NQ-------Y--QA-------GGPTGVELAGEIAVDFPEKKVTLVHKGSRL 158 (275)
Q Consensus 123 --l-~~-------~--~~-------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 158 (275)
. .. . .. +|.+|+|++..+. ..+.+++++++.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la--~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 168 SRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAA--ETAKELYVFQRTPNW 220 (545)
T ss_dssp GGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHT--TTBSEEEEEESSCCC
T ss_pred ccccccccccccccccCCCeEEEECCCccHHHHHHHHH--hhCCEEEEEEcCCCc
Confidence 0 00 1 11 8899999999998 568999999998874
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.83 E-value=2.1e-20 Score=163.28 Aligned_cols=143 Identities=22% Similarity=0.322 Sum_probs=90.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccccc--ccc---cC-----Ccccc---------ccccc--
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL--RAM---VE-----PSFGK---------RSVIN-- 69 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~--~~~---~~-----~~~~~---------~~~~~-- 69 (275)
.++||+|||||++|+++|+.|+ .|++|+|||+++.+|+.|... ++. .. ..+.. .....
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 4589999999999999999998 699999999998887655311 111 00 00000 00000
Q ss_pred -ccccc----c--cc--EE-EEeeeeEe--ecC----eEEecCCeEEeCCEEEEccC--CCCCCCchHHHHHHHH-----
Q 023957 70 -HTDYL----V--NG--RI-VASPAINI--TEN----EVLTAEGRRVVYDYLVIATG--HKDPVPKTRTERLNQY----- 126 (275)
Q Consensus 70 -~~~~~----~--~~--~~-~~~~~~~~--~~~----~v~~~~~~~~~~~~lilatG--~~~~~~~~~~~~l~~~----- 126 (275)
..+++ . ++ .+ ...++..+ +.. .+.+.+|.++.||.||+||| +.|..|.++ +++.+
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ip--G~~~f~g~~~ 177 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFD--GLDRFTGDIV 177 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCT--TGGGCCSEEE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCC--CcccCCCceE
Confidence 00000 0 11 12 12233333 233 67788888899999999999 555555432 11111
Q ss_pred ------------hc-------CCcchhhHHHHHhhhCCCCEEEEEeCCCcc
Q 023957 127 ------------QA-------GGPTGVELAGEIAVDFPEKKVTLVHKGSRL 158 (275)
Q Consensus 127 ------------~~-------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 158 (275)
.. +|.+|+|+|..+.. .+.+++++++.+.+
T Consensus 178 ~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 178 HTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAE--QAEQLFVFQRSANY 226 (549)
T ss_dssp EGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHH--HBSEEEEEESSCCC
T ss_pred EeccccccccccCCCEEEEECCCchHHHHHHHHHh--hCCEEEEEECCCCc
Confidence 00 88999999999984 57899999998874
No 93
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.81 E-value=1e-19 Score=159.26 Aligned_cols=145 Identities=19% Similarity=0.355 Sum_probs=87.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccc--cccc---cC-----Ccccc---------ccccc--
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS--LRAM---VE-----PSFGK---------RSVIN-- 69 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~--~~~~---~~-----~~~~~---------~~~~~-- 69 (275)
.++||+|||||++|+++|+.|+ .|++|+|||+++.+|+.|.. .++. .. ..+.. .....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 3589999999999999999998 69999999999888765521 1110 00 00000 00000
Q ss_pred -cccc-------cc-ccEEE-EeeeeEee--cC----eEEecCCeEEeCCEEEEccCC--CCCCCchHH-HH-----H--
Q 023957 70 -HTDY-------LV-NGRIV-ASPAINIT--EN----EVLTAEGRRVVYDYLVIATGH--KDPVPKTRT-ER-----L-- 123 (275)
Q Consensus 70 -~~~~-------~~-~~~~~-~~~~~~~~--~~----~v~~~~~~~~~~~~lilatG~--~~~~~~~~~-~~-----l-- 123 (275)
..++ +. ...+. ..++..++ .. .+.+.+|.++.+|.||+|+|. .|..|.++. +. +
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~hs 174 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHT 174 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEEC
Confidence 0000 00 11121 22333332 21 577778888999999999994 455544321 00 0
Q ss_pred HHHh-------c-------CCcchhhHHHHHhhhCCCCEEEEEeCCCcc
Q 023957 124 NQYQ-------A-------GGPTGVELAGEIAVDFPEKKVTLVHKGSRL 158 (275)
Q Consensus 124 ~~~~-------~-------~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~ 158 (275)
..+. . +|.+|++++..+.. .+.+++++.+.+.+
T Consensus 175 ~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~--~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 175 GNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAK--QAAELFVFQRTPHF 221 (542)
T ss_dssp GGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHH--HBSEEEEEESSCCC
T ss_pred CCCCCchhccCCCEEEEECCCccHHHHHHHHhh--cCceEEEEEcCCcc
Confidence 0000 0 78889999999984 47899999988765
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.72 E-value=5.7e-16 Score=134.14 Aligned_cols=166 Identities=14% Similarity=0.184 Sum_probs=99.8
Q ss_pred eEEeCCEEEEccCCCCCCCchH------------HHHHHHH-----hc-------CCcchhhHHHHHhhhCCCCEEEEEe
Q 023957 98 RRVVYDYLVIATGHKDPVPKTR------------TERLNQY-----QA-------GGPTGVELAGEIAVDFPEKKVTLVH 153 (275)
Q Consensus 98 ~~~~~~~lilatG~~~~~~~~~------------~~~l~~~-----~~-------~g~~~~~~a~~l~~~~~~~~v~~~~ 153 (275)
.++.++.||+|||..|.+|... ......+ .. +|.+|++++..|.....+.+++++.
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~ 278 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIM 278 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEe
Confidence 4678999999999988877532 1112211 11 8999999999998767789999999
Q ss_pred CCCcccCc---------CCcchHHH-------------------------------HHHHH-----H-----hCCCEEEc
Q 023957 154 KGSRLLEF---------IGPKAGDK-------------------------------TRDWL-----I-----SKKVDVKL 183 (275)
Q Consensus 154 ~~~~~~~~---------~~~~~~~~-------------------------------~~~~~-----~-----~~gv~i~~ 183 (275)
|.+.+.+. +.++..+. +.+.+ . .....+..
T Consensus 279 R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~ 358 (501)
T 4b63_A 279 RDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILP 358 (501)
T ss_dssp SSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEEC
T ss_pred CCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecC
Confidence 98765431 11111111 11111 0 01124555
Q ss_pred CceeeeecCCCC--C------------ceEEcCCCcEEeecEEEEcCCCCCCc-hhhcccccccccCCCCceEeCCCccc
Q 023957 184 GERVNLDSVSEG--S------------DTYLTSTGDTINADCHFLCTGKPVGS-DWLKDTILKDSLDTHGMLMVDENLRV 248 (275)
Q Consensus 184 ~~~v~~i~~~~~--~------------~~v~~~~g~~~~~d~vv~a~G~~~~~-~~~~~~~~~~~~~~~g~i~v~~~~~~ 248 (275)
+..+..+..... . ..+.+.+|+++++|.||+|||++++. .++....-.+..+.+|.+.|+++++.
T Consensus 359 ~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~ 438 (501)
T 4b63_A 359 ERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRV 438 (501)
T ss_dssp SEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBB
T ss_pred CcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEE
Confidence 555555543221 1 12445788899999999999998864 33332222335567788899988764
Q ss_pred c-------CCCCeEEeccccCC
Q 023957 249 K-------GQKNIFAIGDITDI 263 (275)
Q Consensus 249 ~-------~~~~v~a~Gd~~~~ 263 (275)
. ..++||+.|-+-..
T Consensus 439 ~~~~~~~~~~~~i~~qg~~~~t 460 (501)
T 4b63_A 439 EMDPSKVSSEAGIWLQGCNERT 460 (501)
T ss_dssp CCCTTTBCTTCEEEECSCCHHH
T ss_pred eecCCccCCCceEEecCCCccc
Confidence 2 24679999966443
No 95
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.62 E-value=6.4e-17 Score=137.90 Aligned_cols=95 Identities=13% Similarity=0.035 Sum_probs=72.1
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCC--------CCCCchhhcccccccccCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTG--------KPVGSDWLKDTILKDSLDT 236 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G--------~~~~~~~~~~~~~~~~~~~ 236 (275)
.+...+...+++.| +|+++++|++|+.+++.+.|.+.+|+++.||.||+|+| +.|+.+......++. ...
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~-~~~ 282 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE-GHG 282 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH-CCC
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh-CCC
Confidence 45556666666677 99999999999988878888888998899999999999 777654433332221 223
Q ss_pred CCceEeCCCccccCCCCeEEeccccC
Q 023957 237 HGMLMVDENLRVKGQKNIFAIGDITD 262 (275)
Q Consensus 237 ~g~i~v~~~~~~~~~~~v~a~Gd~~~ 262 (275)
...++|+..+++ +.+++|+.||+..
T Consensus 283 ~~~~kv~~~~~~-~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 283 GQGLKILIHVRG-AEAGIECVGDGIF 307 (431)
T ss_dssp CCEEEEEEEEES-CCTTEEEEBSSSS
T ss_pred cceEEEEEEECC-CCcCceEcCCCCE
Confidence 345899999998 6899999999843
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.57 E-value=1.6e-15 Score=130.35 Aligned_cols=144 Identities=14% Similarity=0.047 Sum_probs=84.3
Q ss_pred eEEeCCEEEEccCCCCCCCc-------hHHHHHHHHhc--------------------CCcchhhHHHHHhhhCCCCEEE
Q 023957 98 RRVVYDYLVIATGHKDPVPK-------TRTERLNQYQA--------------------GGPTGVELAGEIAVDFPEKKVT 150 (275)
Q Consensus 98 ~~~~~~~lilatG~~~~~~~-------~~~~~l~~~~~--------------------~g~~~~~~a~~l~~~~~~~~v~ 150 (275)
..+.++.+|+|||..+..+. ...+.+.-... ++. +++++..++ ..+..+
T Consensus 161 g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg-~~~~ae~~~--~~G~~~- 236 (472)
T 2e5v_A 161 LVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE-VFLLTETLR--GEGAQI- 236 (472)
T ss_dssp EECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC-CEECCTHHH--HTTCEE-
T ss_pred CeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC-ceeeehhhc--CCceEE-
Confidence 35779999999998743322 12222211100 111 445555554 335555
Q ss_pred EEeCCCcccCcCCcch--------HHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEe-ecEEEEcCCCCCC
Q 023957 151 LVHKGSRLLEFIGPKA--------GDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTIN-ADCHFLCTGKPVG 221 (275)
Q Consensus 151 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~-~d~vv~a~G~~~~ 221 (275)
+...+.++++.+++.. ...+.+.+++.|. ++.+.. .+. . +. +.++ .+.++++.|..|+
T Consensus 237 v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~--~~~---~-----~~--~~~~~~~~~~~~~G~dp~ 303 (472)
T 2e5v_A 237 INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLS--KIE---D-----FE--RKFPVVAKYLARHGHNYK 303 (472)
T ss_dssp EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECT--TCT---T-----HH--HHCHHHHHHHHHTTCCTT
T ss_pred ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEecc--chH---H-----HH--HHhHHHHHHHHHhCcCcc
Confidence 6667777776554433 5566666666553 332221 111 0 00 1233 4677888899987
Q ss_pred chhhcccccccccCCCCceEeCCCccccCCCCeEEeccccC
Q 023957 222 SDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITD 262 (275)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~v~a~Gd~~~ 262 (275)
.+++.... .+...|.|.||.++|| +.|+|||+|||+.
T Consensus 304 -~~i~v~p~--~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~ 340 (472)
T 2e5v_A 304 -VKIPIFPA--AHFVDGGIRVNIRGES-NIVNLYAIGEVSD 340 (472)
T ss_dssp -SCEECEEE--EEEESCEEECCTTCBC-SSBTEEECGGGEE
T ss_pred -cceEeehh--hceeCCCeEECCCCcc-ccCCEEecchhcc
Confidence 55544322 1234689999999999 8999999999987
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.52 E-value=7.5e-14 Score=108.87 Aligned_cols=56 Identities=11% Similarity=0.001 Sum_probs=44.7
Q ss_pred chHHHHHHHHHhC-CCEEEcCceeeeecCCCCCc-eEEcCCCcEEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISK-KVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+++. |++++ +++|+++..+++.+ .+.+.+|+++++|.||+|+|..++
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 4667788888887 99998 56899987665553 477788888999999999998554
No 98
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.51 E-value=1.2e-13 Score=116.78 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=49.5
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
..+.+.+.+.+++.|++++.+++|+++..+++.+.+.+.+| ++.||.||+|+|..+.
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCccC
Confidence 36778888888889999999999999987777777888888 7999999999998763
No 99
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.41 E-value=1.2e-12 Score=108.85 Aligned_cols=64 Identities=6% Similarity=-0.123 Sum_probs=51.7
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCC-ceEEcCCC--cEEeecEEEEcCCCCCCchhhccc
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTG--DTINADCHFLCTGKPVGSDWLKDT 228 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g--~~~~~d~vv~a~G~~~~~~~~~~~ 228 (275)
..+.+.+.+.+++.|++++.+++|++++.+++. +.+.+.+| .++.||.||+|+|... ..+++..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s-~~l~~~~ 216 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA-PGLARRI 216 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH-HHHHHTE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch-HHHHHHh
Confidence 357888888899999999999999999877654 67888887 4799999999999874 3444443
No 100
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.40 E-value=1.6e-13 Score=114.80 Aligned_cols=56 Identities=9% Similarity=-0.082 Sum_probs=48.5
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
..+...+.+.+++.|++++.+++|++++.+++.+.|.+.+| ++.||.||+|+|...
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 35778888889999999999999999988777777888877 799999999999764
No 101
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.40 E-value=1.3e-12 Score=113.31 Aligned_cols=55 Identities=9% Similarity=-0.075 Sum_probs=47.6
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCce-EEcCCCcEEeecEEEEcCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~ 219 (275)
.+.+.+.+.+++.|++|+++++|++|..+++++. |+++||+++.||.||++++..
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 4778888999999999999999999998777665 889999999999999988754
No 102
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.36 E-value=7.7e-12 Score=104.70 Aligned_cols=62 Identities=10% Similarity=-0.100 Sum_probs=50.4
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhcc
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKD 227 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~ 227 (275)
..+.+.+.+.+++.|++++.+++|++++.+++.+.+.+.+| ++.+|.||+|+|... ..++..
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s-~~l~~~ 225 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS-GMFFKQ 225 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT-HHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH-HHHHHh
Confidence 35778888889999999999999999987777677777777 799999999999874 334443
No 103
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.35 E-value=2e-11 Score=102.39 Aligned_cols=77 Identities=19% Similarity=0.115 Sum_probs=56.7
Q ss_pred CEEEEEeCCCcccCcCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhhc
Q 023957 147 KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLK 226 (275)
Q Consensus 147 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~ 226 (275)
....++.+....+. ...+...+.+.+++.|++++.+++|++++.+++.+.+.+.+| ++.+|.||+|+|..+ ..++.
T Consensus 135 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~-~~l~~ 210 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN-SKLLS 210 (389)
T ss_dssp TEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH-HHHGG
T ss_pred CceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH-HHHhh
Confidence 44555555443332 236778888889999999999999999987766677777666 699999999999865 33443
Q ss_pred c
Q 023957 227 D 227 (275)
Q Consensus 227 ~ 227 (275)
.
T Consensus 211 ~ 211 (389)
T 2gf3_A 211 K 211 (389)
T ss_dssp G
T ss_pred h
Confidence 3
No 104
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.35 E-value=9.9e-12 Score=104.05 Aligned_cols=55 Identities=11% Similarity=-0.127 Sum_probs=46.9
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCce-EEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++++.+++|++++.+++.+. +.+.+| ++.||.||+|+|...
T Consensus 150 ~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 150 EATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 5677788888899999999999999987766665 777777 799999999999774
No 105
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.35 E-value=2.1e-12 Score=103.79 Aligned_cols=97 Identities=13% Similarity=-0.011 Sum_probs=59.2
Q ss_pred chHHHHHHHHHh-CCCEEEcCceeeeecCCCCCc-eEEcC---------CC-----cEEeecEEEEcCCCCCCch-h---
Q 023957 165 KAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTS---------TG-----DTINADCHFLCTGKPVGSD-W--- 224 (275)
Q Consensus 165 ~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~---------~g-----~~~~~d~vv~a~G~~~~~~-~--- 224 (275)
.+...+.+.+.+ .|++++.+++|+++..+++.+ .+.+. +| .++++|.||+|+|..+... +
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~ 199 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 199 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHH
Confidence 455566666665 699999999999998665543 33331 22 5799999999999766432 1
Q ss_pred -hcccccccccCCCCceEeCC-------CccccCCCCeEEeccccC
Q 023957 225 -LKDTILKDSLDTHGMLMVDE-------NLRVKGQKNIFAIGDITD 262 (275)
Q Consensus 225 -~~~~~~~~~~~~~g~i~v~~-------~~~~~~~~~v~a~Gd~~~ 262 (275)
+...++...+.+...+.++. ..++ +.|++|++|+++.
T Consensus 200 ~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 200 RLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVA 244 (284)
T ss_dssp HHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHH
T ss_pred HhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehh
Confidence 11111111222222333332 2233 5799999999874
No 106
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.34 E-value=2.2e-11 Score=109.29 Aligned_cols=57 Identities=5% Similarity=-0.006 Sum_probs=50.0
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
..+...+.+.+++.|++++.+++|+++..+++.+.+.+.+|.++.+|.||+|+|...
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 357788888889999999999999999887777788888888899999999999764
No 107
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.33 E-value=1.1e-11 Score=104.33 Aligned_cols=58 Identities=7% Similarity=-0.095 Sum_probs=48.0
Q ss_pred CcchHHHHHHHHHhCCCEEEcCceeeeecCC----CCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 163 GPKAGDKTRDWLISKKVDVKLGERVNLDSVS----EGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 163 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~----~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
...+.+.+.+.+++.|++++.+++|+++..+ ++.+.+.+.+| ++.||.||+|+|..+.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCccC
Confidence 3467788888888899999999999999855 45566777766 7999999999998874
No 108
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.33 E-value=9.1e-12 Score=106.46 Aligned_cols=57 Identities=14% Similarity=0.196 Sum_probs=48.6
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCC-ceEEcCCCcEEeecEEEEcCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
..+.+.+.+.+++.|++++.+++|+++..+++. +.+.+.+|+++.||.||+|+|..+
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 357788888888999999999999999865554 668888888899999999999876
No 109
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.33 E-value=1.1e-11 Score=105.63 Aligned_cols=56 Identities=21% Similarity=0.188 Sum_probs=48.8
Q ss_pred chHHHHHHHHHhCCCEEEcCc---eeeeecCCCCCce-EEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGE---RVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~---~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++++.++ +|+++..+++.+. |.+.+|+++.||.||+|+|...
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 577888888999999999999 9999987666666 8888998899999999999764
No 110
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.31 E-value=6.2e-11 Score=106.60 Aligned_cols=57 Identities=5% Similarity=-0.045 Sum_probs=49.0
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCc-EEeecEEEEcCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD-TINADCHFLCTGKPV 220 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~-~~~~d~vv~a~G~~~ 220 (275)
..+...+.+.+++.|++++.+++|+++..+++.+.+.+.+|. ++.+|.||+|+|...
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 357888888889999999999999999987777788888886 799999999999764
No 111
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.30 E-value=1.1e-11 Score=107.96 Aligned_cols=50 Identities=12% Similarity=-0.076 Sum_probs=41.2
Q ss_pred HHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCC
Q 023957 170 TRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 170 ~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
.....+..|++|+++++|++|+.+++.+.+.+.+|+++.||.||++++..
T Consensus 218 ~~~l~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 218 SERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHH
Confidence 33334445889999999999988877788888899899999999998864
No 112
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.30 E-value=3.8e-12 Score=110.54 Aligned_cols=58 Identities=19% Similarity=0.237 Sum_probs=49.6
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEcCCCcEEeecEEEEcCCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
..+.+.+.+.+++.|++++.+++|+++..+++.+ .+.+.+|+++.||.||+|+|..+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 4577778888888999999999999998776654 488889999999999999999874
No 113
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.30 E-value=2.3e-11 Score=102.42 Aligned_cols=55 Identities=16% Similarity=0.044 Sum_probs=45.7
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++++.+++|++++.+++.+.+.+.+| ++.||.||+|+|...
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcCh
Confidence 4667788888889999999999999987666666766665 699999999999763
No 114
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.30 E-value=1.6e-11 Score=103.41 Aligned_cols=57 Identities=9% Similarity=0.032 Sum_probs=49.7
Q ss_pred chHHHHHHHHHhC-CCEEEcCceeeeecCCCCCc--eEEcCCCcEEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISK-KVDVKLGERVNLDSVSEGSD--TYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~~--~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+++. |++++.+++|++++.+++.+ .+.+.+|+++.+|.||.|+|..+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 5677788888887 99999999999998877777 788889989999999999998763
No 115
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.29 E-value=2.1e-12 Score=112.34 Aligned_cols=52 Identities=13% Similarity=-0.042 Sum_probs=42.9
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 218 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 218 (275)
.+.+.+.+.+++.|+++.++++|++|..+++ .+++.+|+++.||.||++...
T Consensus 223 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~--~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 223 GIWIAVANTLPKEKTRFGEKGKVTKVNANNK--TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHTSCGGGEEESGGGCEEEEETTTT--EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHhcCeeeecceEEEEEEccCC--EEEEcCCCEEECCEEEECCCH
Confidence 3566677777788999999999999987654 467889999999999999763
No 116
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.28 E-value=1.6e-11 Score=104.28 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=48.8
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCce-EEcCCCcEEeecEEEEcCCCCCCchhh
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPVGSDWL 225 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~~~~~~ 225 (275)
..+.+.+.+.+++.|++|+++++|++|..+++.+. +.+ +|+++.||.||+|+|......++
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHHhc
Confidence 35788889999999999999999999987766655 555 47789999999999865433343
No 117
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.28 E-value=1.7e-11 Score=104.01 Aligned_cols=60 Identities=13% Similarity=0.100 Sum_probs=49.5
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCchhh
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWL 225 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~ 225 (275)
..+.+.+.+.+++.|++|+++++|++|..+++.+ + ..+|+++.||.||+|+|......++
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 4678889999999999999999999999877666 5 5577889999999999976544444
No 118
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.27 E-value=6.4e-11 Score=99.70 Aligned_cols=54 Identities=9% Similarity=-0.097 Sum_probs=44.2
Q ss_pred hHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 166 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 166 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
+.+.+.+.+ .|++++.+++|++++.+++.+.+.+.+|+++.+|.||.|.|..+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 444444443 589999999999998887788888999989999999999998653
No 119
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.26 E-value=3.4e-11 Score=101.71 Aligned_cols=55 Identities=16% Similarity=0.174 Sum_probs=46.8
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+++ ++++.+++|++++.+++.+.+.+.+|+++.+|.||.|.|....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSA 182 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCS
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChH
Confidence 466667777665 8999999999999888888899999999999999999997653
No 120
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.24 E-value=2.1e-10 Score=95.59 Aligned_cols=55 Identities=16% Similarity=0.059 Sum_probs=47.0
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+++|++++.+++.+.+.+.+|+ +.+|.||+|+|...
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccH
Confidence 56778888888999999999999999877666777777775 99999999999754
No 121
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.24 E-value=1.1e-10 Score=97.57 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=46.6
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+++.|++++.+++|++++. + . .+++.+|+++.+|.||.|+|..+.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEETTSCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEECCCCEEEcCEEEECCCccHH
Confidence 5677788888889999999999999987 3 3 788888989999999999998764
No 122
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.23 E-value=4.1e-11 Score=100.72 Aligned_cols=56 Identities=11% Similarity=-0.079 Sum_probs=45.3
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCce-EEc---CCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLT---STGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~---~~g~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+++|++++.+++.+. +.+ .++.++.+|.||.|+|..+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 4667777888888999999999999987766554 555 3556899999999999765
No 123
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.22 E-value=3.5e-11 Score=102.03 Aligned_cols=56 Identities=18% Similarity=0.049 Sum_probs=45.5
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCc--eEEcCCCc--EEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD--TYLTSTGD--TINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~--~v~~~~g~--~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+++|++++.+++.. .+.+.+|+ ++.+|.||.|+|..+
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 466777777888899999999999998765543 45567887 799999999999764
No 124
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.22 E-value=3.8e-11 Score=101.26 Aligned_cols=55 Identities=16% Similarity=-0.067 Sum_probs=46.0
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCC-ceEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+++|+++..+++. ..+.+.+| ++.+|.||+|+|...
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 56777888889999999999999999876554 45777777 699999999999764
No 125
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.20 E-value=5e-11 Score=102.42 Aligned_cols=40 Identities=23% Similarity=0.191 Sum_probs=36.4
Q ss_pred CEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCC
Q 023957 179 VDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 218 (275)
Q Consensus 179 v~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 218 (275)
++|+++++|++|+.+++.+.|.+.+|+++.||.||+|++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCH
Confidence 7999999999999887788899999988999999999874
No 126
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.20 E-value=1.2e-10 Score=100.30 Aligned_cols=54 Identities=17% Similarity=0.041 Sum_probs=45.0
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCC-ceEEcCCCcEEeecEEEEcCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
.+.+.+.+.+++.|++|+++++|++|+.+++. +.|.+ ++.++.||.||+|++..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHH
Confidence 57888899999999999999999999876655 66766 45579999999998753
No 127
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.19 E-value=4.5e-11 Score=98.56 Aligned_cols=48 Identities=17% Similarity=0.143 Sum_probs=39.9
Q ss_pred HHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCC
Q 023957 171 RDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 218 (275)
Q Consensus 171 ~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 218 (275)
....+..|++|+++++|++|+.+++.+.+.+.+|+.+.+|.||+|++.
T Consensus 116 ~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 116 KHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred HHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 333344489999999999999888888888888887899999999873
No 128
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.19 E-value=2.4e-10 Score=93.88 Aligned_cols=51 Identities=14% Similarity=0.088 Sum_probs=41.0
Q ss_pred HHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEe-ecEEEEcCCCCC
Q 023957 169 KTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTIN-ADCHFLCTGKPV 220 (275)
Q Consensus 169 ~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~-~d~vv~a~G~~~ 220 (275)
.+.+.+.+ |++++.+++|++++.+++.+.+.+.+|+.+. +|.||+|+|...
T Consensus 111 ~l~~~l~~-g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 111 AITRAMRG-DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQ 162 (336)
T ss_dssp HHHHHHHT-TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHH
T ss_pred HHHHHHHc-cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHH
Confidence 34444443 8999999999999988888888888998664 999999998643
No 129
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.18 E-value=5.2e-11 Score=99.88 Aligned_cols=56 Identities=11% Similarity=-0.053 Sum_probs=41.8
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCce-EEc-CCC--cEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLT-STG--DTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~-~~g--~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+.+.|++++.++.++.+..+++.+. +.. .++ .++.+|.||.|.|..+
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 4566777778888999999999999877665543 222 233 3689999999999754
No 130
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.18 E-value=1.1e-10 Score=102.45 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=48.4
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEc--CCC-cEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT--STG-DTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~--~~g-~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++|+.+++|+.++.+++.+.+.+ .+| +++.+|+||.|.|...
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 4677788888888999999999999998888877777 678 6899999999999875
No 131
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.17 E-value=1.3e-10 Score=102.32 Aligned_cols=56 Identities=16% Similarity=0.025 Sum_probs=45.9
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCC-CCCceEEcC-CC--cEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVS-EGSDTYLTS-TG--DTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~~v~~~-~g--~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+++|+++..+ ++.+.+.+. +| .++.||.||.|+|..+
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 46777888888899999999999999875 445667776 67 5799999999999865
No 132
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.16 E-value=2.1e-10 Score=100.31 Aligned_cols=56 Identities=11% Similarity=-0.050 Sum_probs=48.0
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCC----CceEEcCCC---cEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEG----SDTYLTSTG---DTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~----~~~v~~~~g---~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+++|++++.+++ .+.+.+.++ .++.||.||.|.|...
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 5677788888889999999999999998777 677777766 6899999999999875
No 133
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.16 E-value=8.2e-11 Score=100.75 Aligned_cols=57 Identities=11% Similarity=-0.018 Sum_probs=44.8
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCce-EEcC---CCc--EEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTS---TGD--TINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~---~g~--~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+++.|++++.+++|+++..+++.+. +.+. +|+ ++.||.||.|+|..+.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 4667778888889999999999999987665543 4443 675 7999999999997653
No 134
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.15 E-value=2.8e-10 Score=98.53 Aligned_cols=56 Identities=11% Similarity=0.184 Sum_probs=48.2
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCc---EEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD---TINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~---~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+++|++++.+++.+.+.+.+++ ++.+|+||.|.|...
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 46777888888889999999999999988877788877764 799999999999875
No 135
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.14 E-value=1.5e-10 Score=106.26 Aligned_cols=55 Identities=24% Similarity=0.070 Sum_probs=46.5
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++++.+++|++++.+++.+ .+.+.+| ++.||.||+|+|...
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 577888889999999999999999998766554 4667777 699999999999875
No 136
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.13 E-value=2.6e-10 Score=97.59 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=35.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~ 51 (275)
.++||+|||||++||+||++|+ .|++|+|+|+++.+|+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 3579999999999999999998 699999999999887553
No 137
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.11 E-value=8.9e-10 Score=93.88 Aligned_cols=56 Identities=9% Similarity=-0.107 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecC-CCCC-ceEEcCCCcEEeecEEEEcCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSV-SEGS-DTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~-~~~~-~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
..+.+.+.+.+++.|++|+++++|++|.. +++. ..|++.+|+++.||.||+++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 36888999999999999999999999986 4443 45888889899999999999988
No 138
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.11 E-value=5.4e-11 Score=101.75 Aligned_cols=61 Identities=20% Similarity=0.114 Sum_probs=47.7
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecC---------------CCCCc-eEEcCCCcEE--eecEEEEcCCCCCCchhhc
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSV---------------SEGSD-TYLTSTGDTI--NADCHFLCTGKPVGSDWLK 226 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~---------------~~~~~-~v~~~~g~~~--~~d~vv~a~G~~~~~~~~~ 226 (275)
.+...+.+.+++.|++++.+++|++++. +++.+ .+.+.+| ++ .||.||+|+|... ..++.
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s-~~l~~ 259 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS-NRLLN 259 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH-HHHHG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH-HHHHH
Confidence 6788888889999999999999999976 44443 4677777 58 9999999999764 33444
Q ss_pred c
Q 023957 227 D 227 (275)
Q Consensus 227 ~ 227 (275)
.
T Consensus 260 ~ 260 (448)
T 3axb_A 260 P 260 (448)
T ss_dssp G
T ss_pred H
Confidence 3
No 139
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.11 E-value=3e-10 Score=95.48 Aligned_cols=57 Identities=7% Similarity=-0.119 Sum_probs=46.1
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCC-CCceEEc-CCCc--EEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSE-GSDTYLT-STGD--TINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~~v~~-~~g~--~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+.+.|++++.+++|++++.++ +.+.+.+ .+|+ ++.+|.||.|.|..+.
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 456667777777899999999999998753 4567776 6887 7999999999998754
No 140
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.10 E-value=3.1e-10 Score=95.73 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=41.7
Q ss_pred chHHHHHHHHHhCCCEEEcCceee---------eecCCCCCceEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVN---------LDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~---------~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++++.+++|+ ++..+++.+.+.+.+| ++.||.||+|+|...
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 578888888999999999999999 8887666666666666 799999999999764
No 141
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.09 E-value=3.8e-10 Score=95.01 Aligned_cols=54 Identities=13% Similarity=-0.036 Sum_probs=42.4
Q ss_pred hHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 166 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 166 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
+.+.+.+.++ +++++.+++|++++.+++.+.+++.+|+++.+|.||.|.|..+.
T Consensus 130 l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 130 LRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp HHHHHHHTSC--TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred HHHHHHhhcC--CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 4444444433 36889999999998877778888889988999999999997653
No 142
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.09 E-value=3.6e-10 Score=97.83 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=47.9
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCc---EEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD---TINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~---~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+++|++++.+++.+.+++.+++ ++.+|+||.|.|...
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 46777888888889999999999999988777778777764 799999999999875
No 143
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.09 E-value=4.4e-10 Score=97.70 Aligned_cols=56 Identities=18% Similarity=0.041 Sum_probs=45.3
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCC---ceEEcCCCc--EEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS---DTYLTSTGD--TINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+++|+++..+++. +.+...+|+ ++.+|.||.|+|...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 46777888888899999999999999876664 334556674 799999999999864
No 144
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.08 E-value=2.5e-10 Score=100.29 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=79.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC-Ccccccc-----c------------cccc---------cC----
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE-YFEITWA-----S------------LRAM---------VE---- 59 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~-~~~~~~~-----~------------~~~~---------~~---- 59 (275)
..+||+|||||+||++||+.|+ .|.+|+|||++. .++.... . +.+. ..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 3589999999999999999998 699999999974 2221000 0 0000 00
Q ss_pred -----Cccc-------cccc----ccccccccccEEEEeeeeEee--cC---eEEecCCeEEeCCEEEEccCCCCCCCch
Q 023957 60 -----PSFG-------KRSV----INHTDYLVNGRIVASPAINIT--EN---EVLTAEGRRVVYDYLVIATGHKDPVPKT 118 (275)
Q Consensus 60 -----~~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~--~~---~v~~~~~~~~~~~~lilatG~~~~~~~~ 118 (275)
+... ...+ .....-..+++++...+..+. .. .+.+.+|..+.++.||+|||..+..+..
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCccc
Confidence 0000 0000 000001136777777777773 22 4566778889999999999998554322
Q ss_pred HH-HHHHHHhcCCcchhhHHHHHhhhCCCCEEEEEe
Q 023957 119 RT-ERLNQYQAGGPTGVELAGEIAVDFPEKKVTLVH 153 (275)
Q Consensus 119 ~~-~~l~~~~~~g~~~~~~a~~l~~~~~~~~v~~~~ 153 (275)
.. .....-..|+.++.+++..+. ..|.+++.+.
T Consensus 187 ~G~~~~~~griGg~~a~eLA~~L~--~lG~~v~~~~ 220 (651)
T 3ces_A 187 IGLDNYSGGRAGDPPSIPLSRRLR--ELPLRVGRLK 220 (651)
T ss_dssp CC-------------CCHHHHHHH--TTTCCEEEEC
T ss_pred cCcccCCCCCccchhhhHHHHHHH--hcCCeEEEec
Confidence 10 000000115677889998887 4577777664
No 145
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.07 E-value=7.6e-10 Score=95.72 Aligned_cols=58 Identities=7% Similarity=-0.075 Sum_probs=45.7
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCC---CCCceEEc--C-CC--cEEeecEEEEcCCCCCCc
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVS---EGSDTYLT--S-TG--DTINADCHFLCTGKPVGS 222 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~---~~~~~v~~--~-~g--~~~~~d~vv~a~G~~~~~ 222 (275)
.+.+.+.+.+++.|++++.+++|++++.+ ++.+.+.+ . +| .++.+|.||+|+|..+..
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 56677788888899999999999999864 34556665 4 66 469999999999987654
No 146
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.04 E-value=7.1e-10 Score=97.64 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=44.0
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCC-CCc-eEEcC--CCc--EEeecEEEEcCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSE-GSD-TYLTS--TGD--TINADCHFLCTGKPV 220 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~--~g~--~~~~d~vv~a~G~~~ 220 (275)
..+.+.+.+.+++.|++++++++|+++..++ +.+ .++.. +|+ ++.+|.||+|+|...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 3567778888889999999999999998655 433 24433 675 689999999999654
No 147
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.03 E-value=2.9e-09 Score=92.52 Aligned_cols=56 Identities=16% Similarity=0.060 Sum_probs=42.8
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCC-CCCc-eEEcC-CCc--EEeec-EEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVS-EGSD-TYLTS-TGD--TINAD-CHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~-~g~--~~~~d-~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++|+++++|+++..+ ++.+ .|... +++ ++.|| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 57788888888999999999999999876 3433 34443 343 58996 9999999654
No 148
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.03 E-value=2.1e-10 Score=91.48 Aligned_cols=38 Identities=26% Similarity=0.316 Sum_probs=34.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~ 50 (275)
++||+|||||||||+||+.|+ .|++|+||||++.+|+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 479999999999999999998 69999999999987743
No 149
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.03 E-value=1.3e-09 Score=95.59 Aligned_cols=57 Identities=12% Similarity=-0.040 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEcCC---C--cEEeecEEEEcCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTST---G--DTINADCHFLCTGKPV 220 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~---g--~~~~~d~vv~a~G~~~ 220 (275)
..+...+.+.+++.|++++.+++|+++..+++.+ .+.+.+ | ..+.||.||+|+|...
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 3577778888889999999999999998766653 355442 3 4799999999999764
No 150
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.02 E-value=1e-09 Score=92.67 Aligned_cols=56 Identities=13% Similarity=0.027 Sum_probs=43.6
Q ss_pred chHHHHHHHHHh-CC-CEEEcCceeeeecCCCCCceEEcCC---C--cEEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLIS-KK-VDVKLGERVNLDSVSEGSDTYLTST---G--DTINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~---g--~~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+++ .| ++++.+++|++++. ++.+.+.+.+ | +++.+|.||.|.|..+.
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccch
Confidence 466677777765 36 68999999999987 6666777665 7 57999999999997653
No 151
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.00 E-value=8.6e-10 Score=97.19 Aligned_cols=57 Identities=16% Similarity=0.003 Sum_probs=45.0
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCC-Cce-EEcC------CC---------cEEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEG-SDT-YLTS------TG---------DTINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~~~-v~~~------~g---------~~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+++.|++|+.++.|+++..+++ .+. |.+. +| .++.+|.||.|.|..+.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 5677788888889999999999999987653 333 6554 33 67999999999998753
No 152
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.00 E-value=3.1e-10 Score=99.82 Aligned_cols=56 Identities=23% Similarity=0.153 Sum_probs=43.9
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCC-CCc-eEEc--CCCc--EEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSE-GSD-TYLT--STGD--TINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~--~~g~--~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++++++|+++..++ +.+ .+++ .+|+ .+.+|.||+|+|-..
T Consensus 251 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 251 EIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 467778888888999999999999998665 443 3444 3675 689999999999654
No 153
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.99 E-value=5.6e-09 Score=90.50 Aligned_cols=56 Identities=18% Similarity=0.057 Sum_probs=45.9
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEc---CCCc--EEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT---STGD--TINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~---~~g~--~~~~d~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++++.+++|+++..+++.+.+.+ .+|+ ++.+|.||+|+|...
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 5677788888899999999999999987665555665 3565 799999999999874
No 154
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.98 E-value=2.1e-09 Score=93.00 Aligned_cols=55 Identities=7% Similarity=-0.073 Sum_probs=48.1
Q ss_pred chHHHHHHHHHhCC-CEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCC
Q 023957 165 KAGDKTRDWLISKK-VDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 165 ~~~~~~~~~~~~~g-v~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
.+.+.+.+.+++.| ++|+++++|++|+..++.+.|.+.+|+++.||.||+|+|..
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 56777888888888 99999999999987777788888888889999999999964
No 155
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.97 E-value=5.8e-09 Score=87.88 Aligned_cols=44 Identities=11% Similarity=0.022 Sum_probs=36.9
Q ss_pred CCCEEEcCceeeeecCCCC-CceEEcCCCcEEeecEEEEcCCCCC
Q 023957 177 KKVDVKLGERVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 177 ~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+..++.++++++++..++ .+.++++||+++++|+||-|-|...
T Consensus 122 ~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNS 166 (412)
T ss_dssp CTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred ccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCc
Confidence 4567889999999986544 5779999999999999999999764
No 156
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.97 E-value=3e-09 Score=93.62 Aligned_cols=56 Identities=20% Similarity=0.197 Sum_probs=43.0
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCC-CCc-eEEcC--CCc--EEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSE-GSD-TYLTS--TGD--TINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~--~g~--~~~~d~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++++++++|+++..++ +.+ .+... +|+ .+.+|.||+|+|-.+
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 467778888889999999999999997555 433 34443 664 689999999999655
No 157
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.95 E-value=3.3e-10 Score=100.42 Aligned_cols=60 Identities=13% Similarity=0.108 Sum_probs=45.4
Q ss_pred CCCEEEcCceeeeecCCCC--C-ceEEcC---CCc--EEeecEEEEcCCCCCCchhhcccccccccCC
Q 023957 177 KKVDVKLGERVNLDSVSEG--S-DTYLTS---TGD--TINADCHFLCTGKPVGSDWLKDTILKDSLDT 236 (275)
Q Consensus 177 ~gv~i~~~~~v~~i~~~~~--~-~~v~~~---~g~--~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~ 236 (275)
.|+++++++.|++|..+++ . ..|++. +|+ ++.+|.||+|+|..+++.++..++++...+.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~~l 340 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRP 340 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCCSSC
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCccccc
Confidence 4899999999999976542 2 334443 454 7899999999999999989888877654433
No 158
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.95 E-value=2.6e-09 Score=93.59 Aligned_cols=55 Identities=24% Similarity=0.230 Sum_probs=45.6
Q ss_pred chHHHHHHHHHhC-CCEEEcCceeeeecCCCCC--ceEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISK-KVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++. |++++.+ +|++++.+++. ..+.+.+|+++.+|.||.|+|..+
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 4777788888888 9999999 99999765443 457788888899999999999765
No 159
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.95 E-value=3.6e-09 Score=89.96 Aligned_cols=57 Identities=9% Similarity=-0.097 Sum_probs=47.6
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
..+.+.+.+.+++.|++|+++++|++|..+++.+..+..+|+++.||.||+++|..+
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 367888888888899999999999999876666553445788899999999999876
No 160
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.94 E-value=4.4e-09 Score=91.99 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=45.7
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCC--ceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+++.|++++.+ +|+++..+++. ..+.+.+|+++.+|.||.|+|....
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 56777888888899999999 89999765443 4577888888999999999998653
No 161
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.93 E-value=7.3e-09 Score=90.97 Aligned_cols=56 Identities=18% Similarity=0.172 Sum_probs=43.6
Q ss_pred chHHHHHHHHHhC-CCEEEcCceeeeecCCCCCce-EEcCCCcEEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISK-KVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
.+...+.+.+++. |++++. ..|+.+..+++.+. |.+.+|+.+.||.||+|+|..++
T Consensus 118 ~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred HHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 4567777888874 999965 58888876555554 77888889999999999998754
No 162
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.93 E-value=7.5e-10 Score=96.89 Aligned_cols=135 Identities=18% Similarity=0.093 Sum_probs=78.1
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC-Ccccccc----------cc-------ccc---------cC----
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE-YFEITWA----------SL-------RAM---------VE---- 59 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~-~~~~~~~----------~~-------~~~---------~~---- 59 (275)
..+||+|||||+||++||+.|+ .|.+|+|||++. .++.... .+ .+. ..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 3589999999999999999998 699999999974 2221000 00 000 00
Q ss_pred -----Ccccc-------ccc----ccccccccccEEEEeeeeEee--cC---eEEecCCeEEeCCEEEEccCCCCCCCch
Q 023957 60 -----PSFGK-------RSV----INHTDYLVNGRIVASPAINIT--EN---EVLTAEGRRVVYDYLVIATGHKDPVPKT 118 (275)
Q Consensus 60 -----~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~--~~---~v~~~~~~~~~~~~lilatG~~~~~~~~ 118 (275)
+.... ..+ .....-..+++++...+.++. .. .+.+.+|..+.++.+|+|||..+..+..
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCEEE
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCcee
Confidence 00000 000 000011136777777777764 22 3667788889999999999988554332
Q ss_pred HHHHHHHHh---cCCcchhhHHHHHhhhCCCCEEE
Q 023957 119 RTERLNQYQ---AGGPTGVELAGEIAVDFPEKKVT 150 (275)
Q Consensus 119 ~~~~l~~~~---~~g~~~~~~a~~l~~~~~~~~v~ 150 (275)
. +...+. .|+.++.+++..|.. .|.++.
T Consensus 186 ~--G~~~~~~Gr~G~~~A~~la~~L~~--lG~~v~ 216 (637)
T 2zxi_A 186 I--GDKMIPGGRLGEPRSEGLSDFYRR--FDFPLI 216 (637)
T ss_dssp E--TTEEEECSBTTBCCBCTHHHHHHH--TTCCCE
T ss_pred c--cceecCCCCCCchhHHHHHHHHHh--cCCceE
Confidence 1 000111 144567888887774 354443
No 163
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.93 E-value=7.9e-09 Score=88.96 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=35.5
Q ss_pred CEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCC
Q 023957 179 VDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 179 v~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
.+|+++++|++|+.+++.+.|.+.+| ++.||.||+|++..
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~ 288 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHP 288 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHH
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHH
Confidence 79999999999988777788888889 69999999998853
No 164
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.91 E-value=3.9e-09 Score=92.79 Aligned_cols=57 Identities=9% Similarity=-0.152 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEcC---CCc--EEeecEEEEcCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--TINADCHFLCTGKPV 220 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~~~~d~vv~a~G~~~ 220 (275)
..+...+.+.+++.|++++.+++|+++..+++.+ .+.+. +|+ ++.||.||+|+|...
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 3566777788888999999999999998766543 35432 333 799999999999764
No 165
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.91 E-value=8.4e-09 Score=90.89 Aligned_cols=55 Identities=13% Similarity=0.010 Sum_probs=42.2
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCC-CCCc-eEEc---CCCc--EEeecEEEEcCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVS-EGSD-TYLT---STGD--TINADCHFLCTGKP 219 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~-~v~~---~~g~--~~~~d~vv~a~G~~ 219 (275)
.+...+.+.+++.|++++.++.|+++..+ ++.+ .+.. .+|+ .+.++.||+|+|-.
T Consensus 144 ~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 144 ALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 46677788888899999999999999764 4433 3442 5665 68999999999964
No 166
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.89 E-value=4.3e-09 Score=91.84 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHhhcCCcEEEEcCCCCccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYFEI 49 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~~g~~v~vie~~~~~~~ 49 (275)
...+||+|||||++||+||+.|++|.+|+|+||.+..+.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG 44 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCTTC-
T ss_pred CCCCCEEEECccHHHHHHHHHHhcCCcEEEEECCCCCCC
Confidence 345899999999999999999977999999999987653
No 167
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.86 E-value=8.3e-09 Score=89.67 Aligned_cols=55 Identities=18% Similarity=0.173 Sum_probs=45.5
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCC--ceEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++.+ +|++++.+++. ..+.+.+|+++.+|.||.|+|...
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 46777888888899999999 89999865444 557788888899999999999864
No 168
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.85 E-value=4.2e-09 Score=93.74 Aligned_cols=55 Identities=15% Similarity=0.026 Sum_probs=41.3
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEE---cCCCc--EEeecEEEEcCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYL---TSTGD--TINADCHFLCTGKP 219 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~---~~~g~--~~~~d~vv~a~G~~ 219 (275)
.+...+.+.+++.|++++.++.|.++..+++.+ .+. +.+|+ .+.++.||+|+|-.
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 456677777778899999999999997654432 333 25675 58999999999954
No 169
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.85 E-value=2.8e-08 Score=87.07 Aligned_cols=52 Identities=10% Similarity=0.135 Sum_probs=41.0
Q ss_pred hHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCC---C--cEEeecEEEEcCCCCC
Q 023957 166 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST---G--DTINADCHFLCTGKPV 220 (275)
Q Consensus 166 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~---g--~~~~~d~vv~a~G~~~ 220 (275)
+.+.+.+.+++. ++.+++|++++.+++.+.+++.+ | .++.||.||.|.|...
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 455666666655 88999999998887777776654 6 4799999999999875
No 170
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.82 E-value=2.8e-08 Score=88.57 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=44.0
Q ss_pred chHHHHHHHHHhCCC--EEEcCceeeeecCCCC----CceEEcC------CC--cEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKV--DVKLGERVNLDSVSEG----SDTYLTS------TG--DTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv--~i~~~~~v~~i~~~~~----~~~v~~~------~g--~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|+ +++.+++|++++.+++ .+.+.+. +| +++.+|.||.|.|...
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 466778888888876 9999999999987652 4556554 46 4799999999999875
No 171
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.81 E-value=9.2e-09 Score=90.93 Aligned_cols=56 Identities=9% Similarity=-0.064 Sum_probs=42.4
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCc-eEEc---CCCc--EEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLT---STGD--TINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~---~~g~--~~~~d~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++++.++.|.++..+++.+ .+.. .+|+ .+.++.||+|+|-..
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 466677777788899999999999997655433 3433 4665 689999999999643
No 172
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.79 E-value=8.6e-09 Score=91.03 Aligned_cols=55 Identities=15% Similarity=0.014 Sum_probs=42.0
Q ss_pred chHHHHHHHHHhCC-CEEEcCceeeeecCCCCCc-eEE---cCCCc--EEeecEEEEcCCCC
Q 023957 165 KAGDKTRDWLISKK-VDVKLGERVNLDSVSEGSD-TYL---TSTGD--TINADCHFLCTGKP 219 (275)
Q Consensus 165 ~~~~~~~~~~~~~g-v~i~~~~~v~~i~~~~~~~-~v~---~~~g~--~~~~d~vv~a~G~~ 219 (275)
.+...+.+.+++.| ++++.++.|+++..+++.+ .+. +.+|+ .+.++.||+|+|-.
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 46667777777788 9999999999997665532 232 36776 78999999999964
No 173
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.79 E-value=2.3e-08 Score=90.44 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=38.0
Q ss_pred CCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCC
Q 023957 177 KKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 218 (275)
Q Consensus 177 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 218 (275)
.|++|+++++|++|+.+++.+.|.+.+|+++.+|.||+|++.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 489999999999999888888899999989999999999863
No 174
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.77 E-value=1.2e-08 Score=88.94 Aligned_cols=55 Identities=15% Similarity=0.115 Sum_probs=44.2
Q ss_pred chHHHHHHHHHh-CCCEEEcCceeeeecCCCCC--ceEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++ .|++++.+ .|++++.+++. ..+.+.+|+++.+|.||.|+|..+
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 467778888888 89999999 59999765443 356777877899999999999865
No 175
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.74 E-value=5.5e-08 Score=78.73 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=33.1
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCcc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFE 48 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~ 48 (275)
..+||+|||||++|+++|+.|+ . |++|+|+|+++..+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 3469999999999999999997 5 99999999988765
No 176
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.71 E-value=8.9e-09 Score=84.24 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=34.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh---cCCcEEEEcCCCCcccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEIT 50 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~---~g~~v~vie~~~~~~~~ 50 (275)
..+||+|||||||||+||++|+ .|++|+||||++.+|+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~ 105 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCce
Confidence 3579999999999999999995 39999999999887743
No 177
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.62 E-value=2.7e-08 Score=82.52 Aligned_cols=38 Identities=32% Similarity=0.302 Sum_probs=33.8
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
||.+++||+|||||++|+++|++|+ +|.+|+|+|++..
T Consensus 2 ~m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 4456789999999999999999998 6999999999764
No 178
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.61 E-value=3.6e-08 Score=84.28 Aligned_cols=55 Identities=9% Similarity=-0.198 Sum_probs=46.0
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCC--CCCc-eEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVS--EGSD-TYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~--~~~~-~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+.+.+.+.+++.|++++++++|++|..+ ++.+ .|.+ +|+++.||.||+++|..+
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFP 300 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccc
Confidence 68888999999999999999999999876 5444 3554 578899999999999875
No 179
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.60 E-value=3.8e-08 Score=82.74 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-c-CCcEEEEcCCCCcccccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFEITWA 52 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~-g~~v~vie~~~~~~~~~~ 52 (275)
..++||+|||||++||+||+.|+ . |++|+|+|+++.+|+...
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 34689999999999999999998 6 999999999999886543
No 180
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.58 E-value=5e-08 Score=80.85 Aligned_cols=42 Identities=26% Similarity=0.488 Sum_probs=36.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCC-CCcccccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK-EYFEITWA 52 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~-~~~~~~~~ 52 (275)
...+||+|||||++||+||+.|+ .|++|+|+|++ +.+|+.+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIK 85 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCcee
Confidence 44689999999999999999998 69999999999 88876544
No 181
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.57 E-value=2.8e-08 Score=86.45 Aligned_cols=39 Identities=26% Similarity=0.486 Sum_probs=35.5
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCCCccccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKEYFEITW 51 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g-~~v~vie~~~~~~~~~ 51 (275)
.+||+|||||++||+||+.|+ .| ++|+|+|+++.+|+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 479999999999999999998 68 9999999999988653
No 182
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.56 E-value=6.1e-08 Score=80.95 Aligned_cols=42 Identities=24% Similarity=0.338 Sum_probs=37.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA 52 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~ 52 (275)
...+||+|||||++|+++|++|+ .|.+|+|+|+++.+|+.+.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 34689999999999999999998 6999999999998886544
No 183
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.56 E-value=5.6e-08 Score=82.36 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=40.9
Q ss_pred hHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCC
Q 023957 166 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 166 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
+........+..+.+++++++|++|+.+++.+.|.+.+|+ +.||.||++++..
T Consensus 205 ~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 205 TQAMFEHLNATLEHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp HHHHHHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHH
T ss_pred HHHHHHHHHHhhcceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHH
Confidence 4444444455566788999999999887777778888876 8999999999853
No 184
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.51 E-value=9.5e-08 Score=82.52 Aligned_cols=41 Identities=32% Similarity=0.327 Sum_probs=36.5
Q ss_pred cCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccc
Q 023957 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (275)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~ 50 (275)
....+||+|||||++||+||+.|+ .|++|+|+|+++..|+.
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 344689999999999999999998 69999999999988864
No 185
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.51 E-value=8.1e-08 Score=83.26 Aligned_cols=40 Identities=33% Similarity=0.420 Sum_probs=35.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~ 50 (275)
..++||+|||||++||+||+.|+ .|++|+|+|+++.+|+.
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCc
Confidence 34589999999999999999998 69999999999988754
No 186
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.51 E-value=5.4e-08 Score=82.67 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+++||+||||||+|+++|+.|+ .|++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 5589999999999999999998 699999999987
No 187
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.46 E-value=1.5e-07 Score=81.12 Aligned_cols=44 Identities=23% Similarity=0.185 Sum_probs=37.2
Q ss_pred cCCCCeEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCCCccccccc
Q 023957 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKEYFEITWAS 53 (275)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~L~-~g-~~v~vie~~~~~~~~~~~ 53 (275)
+.+++||+|||||++||++|++|+ .| .+|+|+|+++.+|+.+..
T Consensus 6 ~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 6 ELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp -CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 345689999999999999999998 57 799999999988865543
No 188
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.44 E-value=1.4e-07 Score=81.27 Aligned_cols=51 Identities=14% Similarity=0.057 Sum_probs=39.2
Q ss_pred hHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEc---CCCcEEeecEEEEcCCCC
Q 023957 166 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT---STGDTINADCHFLCTGKP 219 (275)
Q Consensus 166 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~---~~g~~~~~d~vv~a~G~~ 219 (275)
+.+.+.+.+ |.+|+++++|++|+.+++.+.|.+ .+|+++.||.||+|++..
T Consensus 240 l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 240 LIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAH 293 (478)
T ss_dssp HHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHH
T ss_pred HHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHH
Confidence 444454444 679999999999988777777887 678889999999999854
No 189
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.42 E-value=2e-07 Score=77.38 Aligned_cols=38 Identities=18% Similarity=0.390 Sum_probs=34.5
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccc
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~ 51 (275)
+||+|||||++|+++|++|+ .|++|+|+|+++.+|+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 69999999999999999998 599999999998887543
No 190
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.37 E-value=3.3e-07 Score=76.60 Aligned_cols=39 Identities=21% Similarity=0.516 Sum_probs=35.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~ 51 (275)
.+||+|||||++|+++|+.|+ .|++|+|+|+++.+|+.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 379999999999999999998 599999999999988654
No 191
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.37 E-value=2.5e-07 Score=76.33 Aligned_cols=44 Identities=18% Similarity=0.056 Sum_probs=35.3
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.+...+.+.+++.|++++. ++|++++..+ .+.||.||+|+|...
T Consensus 143 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 143 NYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWA 186 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcCh
Confidence 5778888889999999998 8888775321 167999999999764
No 192
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.36 E-value=2.6e-07 Score=75.23 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=33.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCcc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFE 48 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~~ 48 (275)
..+||+|||||++|+++|++|+ + |++|+|||+....+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 3589999999999999999997 4 99999999988765
No 193
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.35 E-value=3.6e-07 Score=79.04 Aligned_cols=41 Identities=29% Similarity=0.344 Sum_probs=36.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~ 51 (275)
..++||+|||||++||++|+.|+ .|++|+|+|+++.+|+..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 34689999999999999999998 699999999999888643
No 194
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.30 E-value=4.6e-07 Score=75.67 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=31.2
Q ss_pred CeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCc
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYF 47 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~ 47 (275)
+||+|||||++|+++|+.|+ . |.+|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 48999999999999999997 5 9999999998765
No 195
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.24 E-value=5.3e-06 Score=71.09 Aligned_cols=84 Identities=13% Similarity=0.131 Sum_probs=61.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEeeeeEeecCe
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVASPAINITENE 91 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (275)
.++|+|||+|.+|+-+|..|. .|.+|+++++.+..... .+ ..++.+. ..+..+....
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~----------~~-----------~~~V~~~-~~V~~i~~~~ 254 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY----------KW-----------PENWDER-PNLVRVDTEN 254 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC----------CC-----------CTTEEEC-SCEEEECSSE
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC----------CC-----------CCceEEc-CCeEEEeCCE
Confidence 478999999999999999998 69999999987653210 00 0133332 3344455557
Q ss_pred EEecCCeEEeCCEEEEccCCCCCCCch
Q 023957 92 VLTAEGRRVVYDYLVIATGHKDPVPKT 118 (275)
Q Consensus 92 v~~~~~~~~~~~~lilatG~~~~~~~~ 118 (275)
+.+.+|..+.+|.|++|||..|..|..
T Consensus 255 V~~~dG~~i~~D~Vi~atG~~p~~~~l 281 (464)
T 2xve_A 255 AYFADGSSEKVDAIILCTGYIHHFPFL 281 (464)
T ss_dssp EEETTSCEEECSEEEECCCBCCCCTTB
T ss_pred EEECCCCEEeCCEEEECCCCCCCCCCc
Confidence 778889889999999999998776543
No 196
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.23 E-value=1.7e-06 Score=73.96 Aligned_cols=95 Identities=18% Similarity=0.263 Sum_probs=59.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEee--
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT-- 88 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 88 (275)
..+|+|||||++|+.+|..|+ .|.+|+++|+.+.+... . .............+ .++++... .+..++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~---~----~~~~~~~l~~~l~~--~Gv~i~~~~~V~~i~~~ 237 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT---M----DLEVSRAAERVFKK--QGLTIRTGVRVTAVVPE 237 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---S----CHHHHHHHHHHHHH--HTCEEECSCCEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc---c----CHHHHHHHHHHHHH--CCCEEEECCEEEEEEEe
Confidence 478999999999999999998 69999999998764311 0 00000000000000 13444432 333333
Q ss_pred cC--eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 89 EN--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 89 ~~--~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
.+ .+.+.++..+.+|.+++|+|..|..+
T Consensus 238 ~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 238 AKGARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp TTEEEEEETTSCEEEESEEEECSCEEECCT
T ss_pred CCEEEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 22 34455777899999999999887654
No 197
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.20 E-value=1.2e-06 Score=72.09 Aligned_cols=34 Identities=35% Similarity=0.477 Sum_probs=31.1
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++||+|||||+||+.||+.|+ +|.+|+|+|+++.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 379999999999999999998 6999999998774
No 198
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.19 E-value=3.1e-06 Score=71.29 Aligned_cols=96 Identities=18% Similarity=0.278 Sum_probs=62.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeecC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITEN 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 90 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.... .............. ..+++++.. .+..+...
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~------~~~~~~~~l~~~l~--~~GV~i~~~~~v~~i~~~ 216 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA------APATLADFVARYHA--AQGVDLRFERSVTGSVDG 216 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT------SCHHHHHHHHHHHH--HTTCEEEESCCEEEEETT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc------cCHHHHHHHHHHHH--HcCcEEEeCCEEEEEECC
Confidence 579999999999999999998 699999999987643110 00000000000000 024555433 33444433
Q ss_pred eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 91 EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 91 ~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
.+.+.++..+.+|.+++|+|..|...
T Consensus 217 ~v~~~~g~~i~~D~vi~a~G~~p~~~ 242 (408)
T 2gqw_A 217 VVLLDDGTRIAADMVVVGIGVLANDA 242 (408)
T ss_dssp EEEETTSCEEECSEEEECSCEEECCH
T ss_pred EEEECCCCEEEcCEEEECcCCCccHH
Confidence 67777888999999999999987753
No 199
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.16 E-value=1.5e-06 Score=74.66 Aligned_cols=41 Identities=20% Similarity=0.143 Sum_probs=37.1
Q ss_pred CCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCC
Q 023957 178 KVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 218 (275)
Q Consensus 178 gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 218 (275)
|.+|+++++|++|+..++.+.|.+.+|+++.+|.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 67899999999999887788888999988999999999884
No 200
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.15 E-value=3.5e-06 Score=71.60 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=64.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEE-eeeeEeecC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVA-SPAINITEN 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 90 (275)
..+++|||||+.|+.+|..++ .|.+|+|+|+.+.+.... ............. ..++++.. ..+..++..
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~-------d~~~~~~~~~~l~--~~gV~i~~~~~v~~~~~~ 217 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM-------DADMNQPILDELD--KREIPYRLNEEINAINGN 217 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS-------CGGGGHHHHHHHH--HTTCCEEESCCEEEEETT
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc-------cchhHHHHHHHhh--ccceEEEeccEEEEecCC
Confidence 468999999999999999998 699999999987653111 0100000000000 01444433 344456667
Q ss_pred eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 91 EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 91 ~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
.+.+.+++.+++|.+++|+|..|...
T Consensus 218 ~v~~~~g~~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 218 EITFKSGKVEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp EEEETTSCEEECSEEEECCCEEESCG
T ss_pred eeeecCCeEEeeeeEEEEeceecCcH
Confidence 88889999999999999999887653
No 201
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.15 E-value=2.2e-06 Score=71.16 Aligned_cols=91 Identities=22% Similarity=0.220 Sum_probs=60.7
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeecCe
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITENE 91 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 91 (275)
.+++|||||+.|+.+|..|+ .|.+|+++++.+.+.. + ............. ..++++... .+..++...
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----~----~~~~~~~l~~~l~--~~gV~i~~~~~v~~i~~~~ 213 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG----L----DEELSNMIKDMLE--ETGVKFFLNSELLEANEEG 213 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT----C----CHHHHHHHHHHHH--HTTEEEECSCCEEEECSSE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc----C----CHHHHHHHHHHHH--HCCCEEEcCCEEEEEEeeE
Confidence 68999999999999999998 6999999999876431 0 1000000000000 024555432 344454456
Q ss_pred EEecCCeEEeCCEEEEccCCCCCC
Q 023957 92 VLTAEGRRVVYDYLVIATGHKDPV 115 (275)
Q Consensus 92 v~~~~~~~~~~~~lilatG~~~~~ 115 (275)
+.++++. +.+|.+++|+|..|..
T Consensus 214 v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 214 VLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp EEETTEE-EECSCEEEECCEEECC
T ss_pred EEECCCE-EEcCEEEECcCCCcCH
Confidence 7777777 9999999999998776
No 202
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.14 E-value=8.2e-07 Score=79.41 Aligned_cols=35 Identities=29% Similarity=0.458 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhhc------CCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQF------SADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~~------g~~v~vie~~~~ 46 (275)
..+||+||||||+||++|..|++ |.+|+||||.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 35799999999999999999964 999999999764
No 203
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.12 E-value=2.2e-06 Score=76.64 Aligned_cols=40 Identities=38% Similarity=0.639 Sum_probs=35.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~ 50 (275)
...+||+|||||++||++|+.|+ +|++|+|+|+.+.+|+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 145 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 34689999999999999999998 69999999999888754
No 204
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.10 E-value=4.7e-06 Score=69.58 Aligned_cols=95 Identities=19% Similarity=0.291 Sum_probs=60.5
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+++|||||+.|+.+|..|+ .|.+|+++|+.+.+.... ..............+ .++++... .+..+..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~------~~~~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~ 216 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL------LHPAAAKAVQAGLEG--LGVRFHLGPVLASLKKA 216 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT------SCHHHHHHHHHHHHT--TTCEEEESCCEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc------cCHHHHHHHHHHHHH--cCCEEEeCCEEEEEEec
Confidence 579999999999999999998 699999999987643110 000000000000000 24444432 2333322
Q ss_pred -C--eEEecCCeEEeCCEEEEccCCCCCC
Q 023957 90 -N--EVLTAEGRRVVYDYLVIATGHKDPV 115 (275)
Q Consensus 90 -~--~v~~~~~~~~~~~~lilatG~~~~~ 115 (275)
. .+.+.++..+.+|.+++|+|..|..
T Consensus 217 ~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 217 GEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp TTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred CCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 2 5667788889999999999998765
No 205
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.10 E-value=1.3e-06 Score=77.89 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c------CCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F------SADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~------g~~v~vie~~~~ 46 (275)
.+||||||||+|||+||++|+ . |.+|+||||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 489999999999999999997 4 999999999754
No 206
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.10 E-value=2.8e-06 Score=77.62 Aligned_cols=40 Identities=38% Similarity=0.639 Sum_probs=35.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~ 50 (275)
...++|+|||||++||+||+.|+ +|++|+|+|+...+|+.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 34589999999999999999998 69999999999988754
No 207
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.09 E-value=2.2e-05 Score=66.93 Aligned_cols=80 Identities=16% Similarity=0.171 Sum_probs=58.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCc-EEEEcCCCCccccccccccccCCcccccccccccccccccEEEEeeeeEe--e
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSAD-VTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVASPAINI--T 88 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~-v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 88 (275)
.++|+|||||.+|+-+|..|+ .+.+ |+++++.+.+ + .. .++. ....+..+ +
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~------l--------~~----------~~i~-~~~~v~~~~~~ 266 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD------I--------QN----------ESLQ-QVPEITKFDPT 266 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS------C--------BC----------SSEE-EECCEEEEETT
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc------C--------CC----------CCeE-EecCeEEEecC
Confidence 478999999999999999998 5888 9999997754 0 00 0111 12223334 2
Q ss_pred cCeEEecCCeE-EeCCEEEEccCCCCCCCc
Q 023957 89 ENEVLTAEGRR-VVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 89 ~~~v~~~~~~~-~~~~~lilatG~~~~~~~ 117 (275)
...+.+.+|.. +.+|.|++|||..|..|-
T Consensus 267 ~~~v~~~dG~~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 267 TREIYLKGGKVLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp TTEEEETTTEEECCCSEEEECCCBCCCCCC
T ss_pred CCEEEECCCCEeccCCEEEECCCCCcCCCC
Confidence 34677778876 689999999999987765
No 208
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.08 E-value=4.8e-06 Score=71.35 Aligned_cols=96 Identities=25% Similarity=0.338 Sum_probs=59.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||||+.|+.+|..|+ .|.+|+|+|+.+.+.... ..... ..+....+ ..+++++.. .+..++.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~~~~-~~l~~~l~-~~gV~i~~~~~v~~i~~~ 239 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQG-------DPETA-ALLRRALE-KEGIRVRTKTKAVGYEKK 239 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CHHHH-HHHHHHHH-HTTCEEECSEEEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccccc-------CHHHH-HHHHHHHH-hcCCEEEcCCEEEEEEEe
Confidence 479999999999999999998 699999999987643110 00000 00000000 014444432 3333321
Q ss_pred -C--eEEec-C--Ce--EEeCCEEEEccCCCCCCCc
Q 023957 90 -N--EVLTA-E--GR--RVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 90 -~--~v~~~-~--~~--~~~~~~lilatG~~~~~~~ 117 (275)
. .+.+. + ++ ++.+|.+++|+|..|..+.
T Consensus 240 ~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 240 KDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp TTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred CCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 1 34443 4 65 7899999999999877654
No 209
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.08 E-value=4.7e-06 Score=70.26 Aligned_cols=95 Identities=20% Similarity=0.345 Sum_probs=61.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEE-eeeeEeecC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVA-SPAINITEN 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 90 (275)
..+|+|||+|+.|+.+|..|+ .|.+|+++++.+.+.... + ............. ..+++++. ..+..+...
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~--~----~~~~~~~l~~~l~--~~GV~i~~~~~v~~i~~~ 214 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV--L----GRRIGAWLRGLLT--ELGVQVELGTGVVGFSGE 214 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH--H----CHHHHHHHHHHHH--HHTCEEECSCCEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh--c----CHHHHHHHHHHHH--HCCCEEEeCCEEEEEecc
Confidence 578999999999999999998 699999999987653110 0 0000000000000 01445542 233344322
Q ss_pred ----eEEecCCeEEeCCEEEEccCCCCCC
Q 023957 91 ----EVLTAEGRRVVYDYLVIATGHKDPV 115 (275)
Q Consensus 91 ----~v~~~~~~~~~~~~lilatG~~~~~ 115 (275)
.+.+.+++.+.+|.+++|+|..|..
T Consensus 215 ~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 215 GQLEQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp SSCCEEEETTSCEEECSEEEECSCEEECC
T ss_pred CcEEEEEECCCCEEEcCEEEEeeCCeecH
Confidence 5778889899999999999998775
No 210
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.08 E-value=6.5e-06 Score=70.18 Aligned_cols=97 Identities=22% Similarity=0.220 Sum_probs=60.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (275)
..++++|||||++|+.+|..|+ .|.+|+++|+.+.+.... ..............+ .++++... .+..+..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------~~~~~~~~l~~~l~~--~gv~i~~~~~v~~i~~ 219 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY------LDKEFTDVLTEEMEA--NNITIATGETVERYEG 219 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT------CCHHHHHHHHHHHHT--TTEEEEESCCEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc------CCHHHHHHHHHHHHh--CCCEEEcCCEEEEEEc
Confidence 4589999999999999999998 699999999987643110 000000000000001 24555442 3334432
Q ss_pred C----eEEecCCeEEeCCEEEEccCCCCCCCc
Q 023957 90 N----EVLTAEGRRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 90 ~----~v~~~~~~~~~~~~lilatG~~~~~~~ 117 (275)
. .+.+ ++..+.+|.+++|+|..|..+.
T Consensus 220 ~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~ 250 (447)
T 1nhp_A 220 DGRVQKVVT-DKNAYDADLVVVAVGVRPNTAW 250 (447)
T ss_dssp SSBCCEEEE-SSCEEECSEEEECSCEEESCGG
T ss_pred cCcEEEEEE-CCCEEECCEEEECcCCCCChHH
Confidence 2 2444 4568999999999998877543
No 211
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.07 E-value=2.9e-06 Score=72.44 Aligned_cols=95 Identities=17% Similarity=0.223 Sum_probs=60.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++|+.+.+... + ............. ..++++... .+..+..
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---~----~~~~~~~l~~~l~--~~Gv~i~~~~~v~~i~~~ 237 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS---F----DPMISETLVEVMN--AEGPQLHTNAIPKAVVKN 237 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---S----CHHHHHHHHHHHH--HHSCEEECSCCEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh---h----hHHHHHHHHHHHH--HCCCEEEeCCEEEEEEEe
Confidence 579999999999999999998 69999999998764311 0 0000000000000 013444432 2333321
Q ss_pred ----CeEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 90 ----NEVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 ----~~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
..+.+.++..+.+|.+++|+|..|...
T Consensus 238 ~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 238 TDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp TTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred CCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 156677888899999999999988765
No 212
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.03 E-value=8e-06 Score=68.66 Aligned_cols=95 Identities=22% Similarity=0.283 Sum_probs=60.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||+|+.|+.+|..|. .|.+|+++++.+.+.... ........ +.... ...++++... .+..+..
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~------~~~~~~~~-l~~~l-~~~GV~i~~~~~v~~i~~~ 213 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV------VTPEISSY-FHDRH-SGAGIRMHYGVRATEIAAE 213 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT------SCHHHHHH-HHHHH-HHTTCEEECSCCEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc------cCHHHHHH-HHHHH-HhCCcEEEECCEEEEEEec
Confidence 478999999999999999997 699999999987653110 00000000 00000 0014455432 3333322
Q ss_pred -C---eEEecCCeEEeCCEEEEccCCCCCC
Q 023957 90 -N---EVLTAEGRRVVYDYLVIATGHKDPV 115 (275)
Q Consensus 90 -~---~v~~~~~~~~~~~~lilatG~~~~~ 115 (275)
. .+.+.+|+++.+|.+|+|+|..|..
T Consensus 214 ~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 214 GDRVTGVVLSDGNTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp TTEEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred CCcEEEEEeCCCCEEEcCEEEECcCCccCH
Confidence 1 4677888899999999999998765
No 213
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=3.8e-06 Score=71.87 Aligned_cols=95 Identities=16% Similarity=0.265 Sum_probs=57.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeecC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITEN 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 90 (275)
..+|+|||||++|+.+|..|+ .|.+|+|+|+.+.+.... ............. ..++++... .+..++..
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~~ 241 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTY-------DSELTAPVAESLK--KLGIALHLGHSVEGYENG 241 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS-------CHHHHHHHHHHHH--HHTCEEETTCEEEEEETT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccccc-------CHHHHHHHHHHHH--HCCCEEEECCEEEEEEeC
Confidence 578999999999999999998 699999999987653110 0000000000000 013333321 22333222
Q ss_pred --eEEecCC--eEEeCCEEEEccCCCCCCC
Q 023957 91 --EVLTAEG--RRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 91 --~v~~~~~--~~~~~~~lilatG~~~~~~ 116 (275)
.+...+| ..+.+|.+++|+|..|..+
T Consensus 242 ~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 242 CLLANDGKGGQLRLEADRVLVAVGRRPRTK 271 (458)
T ss_dssp EEEEECSSSCCCEECCSCEEECCCEEECCS
T ss_pred CEEEEECCCceEEEECCEEEECcCCCcCCC
Confidence 2222245 5789999999999887664
No 214
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.03 E-value=3.5e-06 Score=75.07 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=31.1
Q ss_pred CCeEEEEcCChHHHHHHHHhh---c--CCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ---F--SADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~---~--g~~v~vie~~~~ 46 (275)
.+||+|||||+|||+||+.|+ + |.+|+|+||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 489999999999999999998 3 999999999874
No 215
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.01 E-value=5.5e-06 Score=70.98 Aligned_cols=95 Identities=19% Similarity=0.306 Sum_probs=60.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.... ............. ..+++++.. .+..+..
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~~-------~~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQF-------DPLLSATLAENMH--AQGIETHLEFAVAALERD 236 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CHHHHHHHHHHHH--HTTCEEESSCCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccccc-------CHHHHHHHHHHHH--HCCCEEEeCCEEEEEEEe
Confidence 478999999999999999998 699999999987543110 0000000000000 013444332 2333322
Q ss_pred ---CeEEecCCe-EEeCCEEEEccCCCCCCC
Q 023957 90 ---NEVLTAEGR-RVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 ---~~v~~~~~~-~~~~~~lilatG~~~~~~ 116 (275)
..+.+.+|. .+.+|.+++|+|..|...
T Consensus 237 ~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 237 AQGTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp TTEEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred CCeEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 256677887 899999999999987764
No 216
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.01 E-value=7.4e-06 Score=71.30 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEEee-eeE
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASP-AIN 86 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~ 86 (275)
..+.+++|||||+.|+..|..++ .|.+|+|+++...+..- +. +......+.+ .++.+.... +..
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~--------D~----ei~~~l~~~l~~~gi~~~~~~~v~~ 288 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGF--------DQ----QCAVKVKLYMEEQGVMFKNGILPKK 288 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTS--------CH----HHHHHHHHHHHHTTCEEEETCCEEE
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccccc--------ch----hHHHHHHHHHHhhcceeecceEEEE
Confidence 34578999999999999999998 59999999876543210 00 0000000000 133333221 122
Q ss_pred ee--cC--eEEecCCeEEeCCEEEEccCCCCCCCch
Q 023957 87 IT--EN--EVLTAEGRRVVYDYLVIATGHKDPVPKT 118 (275)
Q Consensus 87 ~~--~~--~v~~~~~~~~~~~~lilatG~~~~~~~~ 118 (275)
+. .. .+.+.++..+.+|.+++|+|-.|....+
T Consensus 289 ~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L 324 (542)
T 4b1b_A 289 LTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGL 324 (542)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECSCEEESCGGG
T ss_pred EEecCCeEEEEEcCCCeEEEEEEEEcccccCCcccc
Confidence 21 12 5566777788899999999999887543
No 217
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.01 E-value=1.2e-05 Score=67.87 Aligned_cols=95 Identities=21% Similarity=0.226 Sum_probs=61.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEE-eeeeEeecC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVA-SPAINITEN 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 90 (275)
..+|+|||+|+.|+.+|..|+ .|.+|+++++.+.+.... ...... ..+.... ...++++.. ..+..+...
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~------~~~~~~-~~l~~~l-~~~GV~i~~~~~v~~i~~~ 223 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV------AGEALS-EFYQAEH-RAHGVDLRTGAAMDCIEGD 223 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT------SCHHHH-HHHHHHH-HHTTCEEEETCCEEEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh------cCHHHH-HHHHHHH-HhCCCEEEECCEEEEEEec
Confidence 578999999999999999998 699999999987653110 000000 0000000 002455543 233344321
Q ss_pred -----eEEecCCeEEeCCEEEEccCCCCCC
Q 023957 91 -----EVLTAEGRRVVYDYLVIATGHKDPV 115 (275)
Q Consensus 91 -----~v~~~~~~~~~~~~lilatG~~~~~ 115 (275)
.+.+.+++.+.+|.+|+|+|..|..
T Consensus 224 ~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 224 GTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp SSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred CCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 5777888899999999999998776
No 218
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.00 E-value=1.8e-05 Score=65.03 Aligned_cols=89 Identities=11% Similarity=-0.099 Sum_probs=70.2
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCccc---------------------CcC--C---------cchHHHHHHHHHh
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------------EFI--G---------PKAGDKTRDWLIS 176 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~---------------------~~~--~---------~~~~~~~~~~~~~ 176 (275)
+|..|+..|..|. ..+.+++++++.+.+. +.+ . ..+.+.+.+.+++
T Consensus 11 ~G~aGl~~A~~l~--~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 88 (357)
T 4a9w_A 11 GGQSGLSAGYFLR--RSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLAQYEQK 88 (357)
T ss_dssp CSHHHHHHHHHHH--HSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH--HCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHHHHHHH
Confidence 6778899999988 4588999999875421 000 0 3466777788888
Q ss_pred CCCEEEcCceeeeecCCCCCce-EEcCCCcEEeecEEEEcCCCCC
Q 023957 177 KKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 177 ~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.|++++.+++|++++.+++.+. +.+.+| ++.+|.||+|+|..+
T Consensus 89 ~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 89 YALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp TTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred cCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 9999999999999988777777 888887 799999999999643
No 219
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.00 E-value=1.4e-05 Score=63.98 Aligned_cols=87 Identities=16% Similarity=0.105 Sum_probs=61.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEeeeeEeecC-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVASPAINITEN- 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 90 (275)
.++|+|||+|+.|+.+|..|. .| +|+++++.+.. +..... + ... ..+++++...+..+...
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~------~~~~~~-----~---~l~--~~gv~i~~~~v~~i~~~~ 203 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE------PDADQH-----A---LLA--ARGVRVETTRIREIAGHA 203 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC------CCHHHH-----H---HHH--HTTCEEECSCEEEEETTE
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC------CCHHHH-----H---HHH--HCCcEEEcceeeeeecCC
Confidence 578999999999999999998 57 99999987640 000000 0 000 12555555455566554
Q ss_pred eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 91 EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 91 ~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
.+.+.+++.+.+|.+++|+|..|..+
T Consensus 204 ~v~~~~g~~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 204 DVVLADGRSIALAGLFTQPKLRITVD 229 (297)
T ss_dssp EEEETTSCEEEESEEEECCEEECCCS
T ss_pred eEEeCCCCEEEEEEEEEccCcccCch
Confidence 78888888999999999999987764
No 220
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.98 E-value=1.9e-05 Score=68.86 Aligned_cols=35 Identities=31% Similarity=0.356 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..++|+|||+|..|+.+|..|+ .+.+|+++++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 3579999999999999999998 5999999999887
No 221
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.97 E-value=5.3e-06 Score=72.59 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~ 47 (275)
...+|++|||+|++|+.+|.+|. .|.+|+|+|+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35699999999999999999998 69999999998743
No 222
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.97 E-value=9.9e-06 Score=70.09 Aligned_cols=95 Identities=14% Similarity=0.214 Sum_probs=60.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+... + .............+ .++++... .+..+..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---~----d~~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~ 246 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK---F----DESVINVLENDMKK--NNINIVTFADVVEIKKV 246 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT---S----CHHHHHHHHHHHHH--TTCEEECSCCEEEEEES
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc---c----chhhHHHHHHHHHh--CCCEEEECCEEEEEEEc
Confidence 578999999999999999998 69999999998764311 0 00000000000000 13444322 2333321
Q ss_pred --C--eEEecCCeE-EeCCEEEEccCCCCCCC
Q 023957 90 --N--EVLTAEGRR-VVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 --~--~v~~~~~~~-~~~~~lilatG~~~~~~ 116 (275)
. .+.+.+|.. +.+|.+++|+|..|...
T Consensus 247 ~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 247 SDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp STTCEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred CCceEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 1 466677777 89999999999998764
No 223
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=9.5e-06 Score=69.35 Aligned_cols=96 Identities=21% Similarity=0.290 Sum_probs=58.0
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEee-
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT- 88 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 88 (275)
..++|+|||||+.|+.+|..|+ .|.+|+++|+.+.+.... ............. ..+++++.. .+..+.
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGF-------EKQMAAIIKKRLK--KKGVEVVTNALAKGAEE 239 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTS-------CHHHHHHHHHHHH--HTTCEEEESEEEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccc-------CHHHHHHHHHHHH--HCCCEEEeCCEEEEEEE
Confidence 3579999999999999999998 699999999987653110 0000000000000 014444432 333332
Q ss_pred -cC--eEEec---CCeEEeCCEEEEccCCCCCCC
Q 023957 89 -EN--EVLTA---EGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 89 -~~--~v~~~---~~~~~~~~~lilatG~~~~~~ 116 (275)
.. .+.+. ++..+.+|.+++|+|..|..+
T Consensus 240 ~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 240 REDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp ETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred eCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 11 23332 346789999999999887654
No 224
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.95 E-value=1.7e-05 Score=67.35 Aligned_cols=96 Identities=24% Similarity=0.260 Sum_probs=60.1
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (275)
...+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.... .............. ..++++... .+..+..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~------~~~~~~~~l~~~l~--~~GV~i~~~~~v~~i~~ 219 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV------TAPPVSAFYEHLHR--EAGVDIRTGTQVCGFEM 219 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT------SCHHHHHHHHHHHH--HHTCEEECSCCEEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch------hhHHHHHHHHHHHH--hCCeEEEeCCEEEEEEe
Confidence 3579999999999999999998 699999999977542110 00000000000000 013444332 2333332
Q ss_pred ----C---eEEecCCeEEeCCEEEEccCCCCCC
Q 023957 90 ----N---EVLTAEGRRVVYDYLVIATGHKDPV 115 (275)
Q Consensus 90 ----~---~v~~~~~~~~~~~~lilatG~~~~~ 115 (275)
. .+.+.++..+.+|.+++|+|..|..
T Consensus 220 ~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 220 STDQQKVTAVLCEDGTRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp CTTTCCEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred ccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCc
Confidence 1 4667788889999999999998765
No 225
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.93 E-value=2.4e-05 Score=63.30 Aligned_cols=91 Identities=16% Similarity=0.002 Sum_probs=68.6
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCC--Cccc--------CcC----CcchHHHHHHHHHhCCCEEEcCceeeeecCCC
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKG--SRLL--------EFI----GPKAGDKTRDWLISKKVDVKLGERVNLDSVSE 194 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~--~~~~--------~~~----~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~ 194 (275)
+|..|+..|..+.. .+.+++++++. ..+. +.+ ..++.+.+.+.+++.|++++. .+|.++..++
T Consensus 23 ~G~aGl~aA~~l~~--~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~ 99 (323)
T 3f8d_A 23 LGPAAYGAALYSAR--YMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRG 99 (323)
T ss_dssp CSHHHHHHHHHHHH--TTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC-
T ss_pred ccHHHHHHHHHHHH--CCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecC
Confidence 77788888988884 57889999986 1110 111 124566677778888999999 8999998777
Q ss_pred CCceEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 195 GSDTYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 195 ~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
+.+.+.+.+|.++.+|.+|+|+|..|..
T Consensus 100 ~~~~v~~~~g~~~~~d~lvlAtG~~~~~ 127 (323)
T 3f8d_A 100 DEFVVKTKRKGEFKADSVILGIGVKRRK 127 (323)
T ss_dssp -CEEEEESSSCEEEEEEEEECCCCEECC
T ss_pred CEEEEEECCCCEEEcCEEEECcCCCCcc
Confidence 7778888888899999999999988654
No 226
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.92 E-value=6.7e-06 Score=71.61 Aligned_cols=36 Identities=42% Similarity=0.567 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh--cCCcEEEEcCCCCc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ--FSADVTLIDPKEYF 47 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~--~g~~v~vie~~~~~ 47 (275)
..||+||||||++|+.+|.+|. .+++|+|||+....
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 3699999999999999999997 47899999998653
No 227
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.90 E-value=1.2e-05 Score=69.23 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=59.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (275)
...+++|||||+.|+.+|..|+ .|.+|+++++.+.+.... .+........... ..++++... .+..+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------d~~~~~~l~~~l~--~~Gv~i~~~~~v~~i~~ 254 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKF-------DECIQNTITDHYV--KEGINVHKLSKIVKVEK 254 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-------CHHHHHHHHHHHH--HHTCEEECSCCEEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccccc-------CHHHHHHHHHHHH--hCCeEEEeCCEEEEEEE
Confidence 3578999999999999999998 699999999987643110 0000000000000 013444332 2233321
Q ss_pred ------CeEEecCC-eEEeCCEEEEccCCCCCC
Q 023957 90 ------NEVLTAEG-RRVVYDYLVIATGHKDPV 115 (275)
Q Consensus 90 ------~~v~~~~~-~~~~~~~lilatG~~~~~ 115 (275)
..+.+.+| ..+.+|.+++|+|..|..
T Consensus 255 ~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 255 NVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp CC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred cCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 14666778 789999999999988765
No 228
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.89 E-value=5.1e-06 Score=74.14 Aligned_cols=35 Identities=29% Similarity=0.576 Sum_probs=32.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cC--------CcEEEEcCCC-Cc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FS--------ADVTLIDPKE-YF 47 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g--------~~v~vie~~~-~~ 47 (275)
.++|+|||||++||+||+.|+ .| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 479999999999999999997 57 9999999998 77
No 229
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.89 E-value=8.3e-06 Score=70.17 Aligned_cols=95 Identities=18% Similarity=0.276 Sum_probs=58.1
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++|+.+.+...+. ............ ..+++++.. .+..+..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~-------~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~~ 253 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMD-------GEVAKATQKFLK--KQGLDFKLSTKVISAKRN 253 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSC-------HHHHHHHHHHHH--HTTCEEECSEEEEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccC-------HHHHHHHHHHHH--HCCCEEEeCCEEEEEEEe
Confidence 579999999999999999998 6999999999876542110 000000000000 013444332 3333332
Q ss_pred ---C--eEEec-----CCeEEeCCEEEEccCCCCCCC
Q 023957 90 ---N--EVLTA-----EGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 ---~--~v~~~-----~~~~~~~~~lilatG~~~~~~ 116 (275)
. .+.+. ++..+.+|.+++|+|..|...
T Consensus 254 ~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 254 DDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred cCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 1 33333 346789999999999887654
No 230
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.87 E-value=2.8e-05 Score=68.67 Aligned_cols=93 Identities=19% Similarity=0.246 Sum_probs=62.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEE-eeeeEee
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVA-SPAINIT 88 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~ 88 (275)
..+|+|||||..|+.+|..|+ .|.+|+++++.+.+.... .. .......+.+ .++++.. ..+..+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~----~~~~~l~~~l~~~GV~i~~~~~v~~i~ 255 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPI-------DY----EMAAYVHEHMKNHDVELVFEDGVDALE 255 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-------CH----HHHHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccC-------CH----HHHHHHHHHHHHcCCEEEECCeEEEEe
Confidence 478999999999999999998 699999999987543110 00 0000000100 2455543 2334444
Q ss_pred c--CeEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 89 E--NEVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 89 ~--~~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
. ..+.+.++..+.+|.+++|+|..|..+
T Consensus 256 ~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~ 285 (588)
T 3ics_A 256 ENGAVVRLKSGSVIQTDMLILAIGVQPESS 285 (588)
T ss_dssp GGGTEEEETTSCEEECSEEEECSCEEECCH
T ss_pred cCCCEEEECCCCEEEcCEEEEccCCCCChH
Confidence 3 467778888999999999999887653
No 231
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.85 E-value=2.4e-05 Score=67.54 Aligned_cols=95 Identities=24% Similarity=0.290 Sum_probs=57.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccc-ccccccCCcccccccccccccccccEEEE-eeeeEee
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA-SLRAMVEPSFGKRSVINHTDYLVNGRIVA-SPAINIT 88 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 88 (275)
...+|+|||||+.|+.+|..|+ .|.+|+++++.+.+..... .+...+... +. ..+++.. ..+..+.
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~-----l~------~~V~i~~~~~v~~i~ 241 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKT-----FN------EEFYFDAKARVISTI 241 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHH-----HH------TTSEEETTCEEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHH-----Hh------hCcEEEECCEEEEEE
Confidence 3579999999999999999998 6999999999887531110 000000000 00 0122221 1122222
Q ss_pred --cC--eEEec--CC--eEEeCCEEEEccCCCCCCCc
Q 023957 89 --EN--EVLTA--EG--RRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 89 --~~--~v~~~--~~--~~~~~~~lilatG~~~~~~~ 117 (275)
.. .+.+. +| ..+.+|.+++|+|..|....
T Consensus 242 ~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 242 EKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp ECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred EcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 11 33332 56 67899999999999876543
No 232
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.84 E-value=1.1e-05 Score=69.76 Aligned_cols=95 Identities=17% Similarity=0.246 Sum_probs=60.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c---CCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEe
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINI 87 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 87 (275)
..+++|||||..|+.+|..|+ . |.+|+++++.+.+... + ............. ..+++++.. .+..+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~---~----d~~~~~~l~~~l~--~~GV~i~~~~~v~~i 261 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG---F----DETIREEVTKQLT--ANGIEIMTNENPAKV 261 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT---S----CHHHHHHHHHHHH--HTTCEEEESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc---c----CHHHHHHHHHHHH--hCCCEEEeCCEEEEE
Confidence 478999999999999999987 5 9999999998764311 0 0000000000000 024555433 33333
Q ss_pred ec-----CeEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 88 TE-----NEVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 88 ~~-----~~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
.. ..+.+.+|..+.+|.+++|+|..|...
T Consensus 262 ~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 262 SLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred EEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 21 156677888899999999999987764
No 233
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.84 E-value=9.4e-05 Score=61.70 Aligned_cols=90 Identities=16% Similarity=0.168 Sum_probs=67.5
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccC---c--------CC-cchHHHHHHHHHhCCCEEEcCceeeeecCCCCC
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---F--------IG-PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS 196 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---~--------~~-~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~ 196 (275)
+|..|+.+|..|. ..+.+++++++.+...- . .. .++.....+.+++.|++++.+++|+.++.+++
T Consensus 17 gG~AGl~aA~~L~--~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~- 93 (385)
T 3klj_A 17 AGPAGFSAAKAAL--GKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNK- 93 (385)
T ss_dssp CSHHHHHHHHHHT--TTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEETTTT-
T ss_pred CcHHHHHHHHHHh--CCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEECCCC-
Confidence 7888999999984 67889999998775321 0 00 11222234556788999999999999986543
Q ss_pred ceEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 197 DTYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 197 ~~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
.+.+.+|+++.+|.+|+|+|.+|..
T Consensus 94 -~v~~~~g~~~~yd~lvlAtG~~p~~ 118 (385)
T 3klj_A 94 -LVTLKSGEKIKYEKLIIASGSIANK 118 (385)
T ss_dssp -EEEETTSCEEECSEEEECCCEEECC
T ss_pred -EEEECCCCEEECCEEEEecCCCcCC
Confidence 5778889999999999999987754
No 234
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.83 E-value=1.2e-05 Score=69.46 Aligned_cols=93 Identities=17% Similarity=0.237 Sum_probs=60.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c---CCcEEEEcCCCCccccccccccccCCccccccccccccc--ccccEEEEe-eee
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDY--LVNGRIVAS-PAI 85 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~ 85 (275)
..+++|||||+.|+.+|..|+ . |.+|+++++.+.+... + .. .......+. ..+++++.. .+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~---~----d~----~~~~~l~~~l~~~GV~i~~~~~v~ 255 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG---F----DS----ELRKQLTEQLRANGINVRTHENPA 255 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT---S----CH----HHHHHHHHHHHHTTEEEEETCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc---c----CH----HHHHHHHHHHHhCCCEEEeCCEEE
Confidence 479999999999999999987 5 9999999998764311 0 00 000000000 024455432 333
Q ss_pred Eeec-----CeEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 86 NITE-----NEVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 86 ~~~~-----~~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
.+.. ..+.+.++..+.+|.+++|+|..|...
T Consensus 256 ~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 256 KVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp EEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCcc
Confidence 3321 156667787899999999999887654
No 235
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.82 E-value=1.1e-05 Score=69.47 Aligned_cols=95 Identities=14% Similarity=0.223 Sum_probs=58.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEee--
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT-- 88 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 88 (275)
..+|+|||||+.|+.+|..|+ .|.+|+|+|+.+.+... + ............. ..+++++.. .+..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~---~----~~~~~~~l~~~l~--~~gV~i~~~~~v~~i~~~ 255 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG---A----DRDLVKVWQKQNE--YRFDNIMVNTKTVAVEPK 255 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---S----CHHHHHHHHHHHG--GGEEEEECSCEEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc---c----CHHHHHHHHHHHH--hcCCEEEECCEEEEEEEc
Confidence 579999999999999999998 69999999998764311 0 0000000000000 013444322 223332
Q ss_pred cC--eEEecC----CeEEeCCEEEEccCCCCCCC
Q 023957 89 EN--EVLTAE----GRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 89 ~~--~v~~~~----~~~~~~~~lilatG~~~~~~ 116 (275)
.. .+.+.+ +..+.+|.+++|+|..|...
T Consensus 256 ~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 256 EDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp TTEEEEEEESSSCCSSCEEESCEEECCCEEECGG
T ss_pred CCeEEEEEeccCCCceEEEcCEEEECcCCCcCCC
Confidence 11 344444 66788999999999987653
No 236
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.82 E-value=3.6e-05 Score=66.58 Aligned_cols=96 Identities=16% Similarity=0.189 Sum_probs=59.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (275)
...+++|||||+.|+.+|..|+ .|.+|+++++.+.+... + ............. ..+++++.. .+..+..
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---~----d~~~~~~l~~~l~--~~GV~i~~~~~V~~i~~ 251 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY---E----DADAALVLEESFA--ERGVRLFKNARAASVTR 251 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC---S----SHHHHHHHHHHHH--HTTCEEETTCCEEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---c----CHHHHHHHHHHHH--HCCCEEEeCCEEEEEEE
Confidence 3478999999999999999998 69999999998765311 0 0000000000000 013444322 2233321
Q ss_pred --C--eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 90 --N--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 --~--~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
. .+.+.++.++.+|.+++|+|..|...
T Consensus 252 ~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 252 TGAGVLVTMTDGRTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp CSSSEEEEETTSCEEEESEEEECCCEEECCS
T ss_pred eCCEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 1 35556777899999999999887653
No 237
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.81 E-value=2.1e-05 Score=67.83 Aligned_cols=96 Identities=20% Similarity=0.286 Sum_probs=59.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (275)
...+|+|||||+.|+.+|..|+ .|.+|+++++.+.+... ...............+ .+++++.. .+..+..
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------~~~~~~~~~l~~~l~~--~GV~i~~~~~v~~i~~ 264 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG------YYDRDLTDLMAKNMEE--HGIQLAFGETVKEVAG 264 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------TSCHHHHHHHHHHHHT--TTCEEEETCCEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh------HHHHHHHHHHHHHHHh--CCeEEEeCCEEEEEEc
Confidence 4579999999999999999998 69999999998764310 0000000000000000 24454432 2333332
Q ss_pred C----eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 90 N----EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 ~----~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
+ .+.+ ++.++.+|.+++|+|..|..+
T Consensus 265 ~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 265 NGKVEKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp SSSCCEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred CCcEEEEEE-CCcEEECCEEEECCCCCcChH
Confidence 2 2444 567899999999999887764
No 238
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.81 E-value=2.6e-05 Score=63.36 Aligned_cols=87 Identities=13% Similarity=0.098 Sum_probs=67.7
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccC---------------cC----CcchHHHHHHHHHhCCCEEEcCceeee
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------FI----GPKAGDKTRDWLISKKVDVKLGERVNL 189 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---------------~~----~~~~~~~~~~~~~~~gv~i~~~~~v~~ 189 (275)
+|..|+..|..+. ..+.+++++++.+.+.. .+ ..++...+.+.+++.|++++.+++|..
T Consensus 15 ~G~aGl~aA~~l~--~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 92 (332)
T 3lzw_A 15 GGPVGLFTAFYGG--MRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLEQAVES 92 (332)
T ss_dssp CSHHHHHHHHHHH--HTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEE
T ss_pred CCHHHHHHHHHHH--HCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEE
Confidence 6778888888888 45889999998764320 11 134556677777788999999999999
Q ss_pred ecCCCC-CceEEcCCCcEEeecEEEEcCCC
Q 023957 190 DSVSEG-SDTYLTSTGDTINADCHFLCTGK 218 (275)
Q Consensus 190 i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~ 218 (275)
++..++ .+.+.+.+|+ +.+|.||+|+|.
T Consensus 93 i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 93 VEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp EEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred EEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 987765 5678888876 999999999998
No 239
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.81 E-value=1.2e-05 Score=70.13 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhhcCCcEEEEcCCCCc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYF 47 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~~g~~v~vie~~~~~ 47 (275)
..||+||||||.||+.+|.+|..|.+|+|+|+.+..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCc
Confidence 358999999999999999999879999999998764
No 240
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.80 E-value=6.5e-05 Score=61.23 Aligned_cols=89 Identities=16% Similarity=0.064 Sum_probs=67.7
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccC---------------cC----CcchHHHHHHHHHhCCCEEEcCceeee
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------FI----GPKAGDKTRDWLISKKVDVKLGERVNL 189 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---------------~~----~~~~~~~~~~~~~~~gv~i~~~~~v~~ 189 (275)
+|..|+..|..+. ..+.+++++++.+.+.. .+ ..++.+.+.+.+++.+++++.+++|..
T Consensus 13 ~G~aGl~aA~~l~--~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~ 90 (335)
T 2zbw_A 13 AGPTGLFAGFYVG--MRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAET 90 (335)
T ss_dssp CSHHHHHHHHHHH--HTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEE
T ss_pred CCHHHHHHHHHHH--hCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 6778888888887 45789999998754310 01 123455566677778999999999999
Q ss_pred ecCCCCCceEEcCCCcEEeecEEEEcCCCC
Q 023957 190 DSVSEGSDTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 190 i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
++.+++.+.+.+.+|+++.+|.||+|+|..
T Consensus 91 i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 91 LEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp EEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred EEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 987665666778888889999999999984
No 241
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.80 E-value=1.3e-05 Score=64.71 Aligned_cols=35 Identities=31% Similarity=0.552 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~ 47 (275)
.++|+|||||..|+.+|..|+ .|.+|+++++....
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 478999999999999999998 59999999987653
No 242
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.80 E-value=2.2e-05 Score=67.43 Aligned_cols=97 Identities=19% Similarity=0.245 Sum_probs=58.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++|+.+.+... .+ ...... .+....+ ..+++++.. .+..+..
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--~~----~~~~~~-~l~~~l~-~~Gv~i~~~~~v~~i~~~ 249 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--GI----DMEISK-NFQRILQ-KQGFKFKLNTKVTGATKK 249 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--SC----CHHHHH-HHHHHHH-HTTCEEECSEEEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--cc----CHHHHH-HHHHHHH-HCCCEEEeCceEEEEEEc
Confidence 478999999999999999998 69999999998764310 00 000000 0000000 013444322 2333321
Q ss_pred -C---eEE-----ecCCeEEeCCEEEEccCCCCCCCc
Q 023957 90 -N---EVL-----TAEGRRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 90 -~---~v~-----~~~~~~~~~~~lilatG~~~~~~~ 117 (275)
. .+. ..++.++.+|.+++|+|..|....
T Consensus 250 ~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~ 286 (474)
T 1zmd_A 250 SDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKN 286 (474)
T ss_dssp TTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTT
T ss_pred CCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCc
Confidence 1 222 245678999999999999877653
No 243
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.79 E-value=3.9e-05 Score=65.87 Aligned_cols=96 Identities=16% Similarity=0.242 Sum_probs=60.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c-CCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (275)
..+++|||+|+.|+.+|..|+ . |.+|+++++.+.+... ............... ..++++... .+..+..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~------~~~~~~~~~l~~~l~--~~GV~i~~~~~v~~i~~ 230 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG------FTSKSLSQMLRHDLE--KNDVVVHTGEKVVRLEG 230 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT------TSCHHHHHHHHHHHH--HTTCEEECSCCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc------ccCHHHHHHHHHHHH--hcCCEEEeCCEEEEEEc
Confidence 579999999999999999997 6 9999999998754310 000000000000000 024555433 3334432
Q ss_pred --C--eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 90 --N--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 --~--~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
. .+.+.+++++.+|.+++|+|..|..+
T Consensus 231 ~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 261 (472)
T 3iwa_A 231 ENGKVARVITDKRTLDADLVILAAGVSPNTQ 261 (472)
T ss_dssp SSSBEEEEEESSCEEECSEEEECSCEEECCH
T ss_pred cCCeEEEEEeCCCEEEcCEEEECCCCCcCHH
Confidence 2 36667788899999999999987653
No 244
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.77 E-value=1.9e-05 Score=69.43 Aligned_cols=95 Identities=15% Similarity=0.199 Sum_probs=58.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.... ............. ..++++... .+..+..
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~~~~~~l~~~l~--~~GV~i~~~~~v~~i~~~ 221 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPV-------DREMAGFAHQAIR--DQGVDLRLGTALSEVSYQ 221 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTS-------CHHHHHHHHHHHH--HTTCEEEETCCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhc-------CHHHHHHHHHHHH--HCCCEEEeCCeEEEEecc
Confidence 468999999999999999997 699999999987543110 0000000000000 013333321 2222221
Q ss_pred --------------------C--eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 90 --------------------N--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 --------------------~--~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
. .+...+++.+.+|.+++|+|..|...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 270 (565)
T 3ntd_A 222 VQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQ 270 (565)
T ss_dssp CCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCH
T ss_pred ccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchH
Confidence 1 45567788899999999999987653
No 245
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.77 E-value=2.8e-05 Score=66.26 Aligned_cols=94 Identities=19% Similarity=0.249 Sum_probs=56.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEE-eeeeEeecC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVA-SPAINITEN 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 90 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.... ....... .+..... ..+++.. ..+..+...
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~------~~~~~~~-~l~~~l~--~~v~i~~~~~v~~i~~~ 218 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS------FDKEVTD-ILEEKLK--KHVNLRLQEITMKIEGE 218 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT------SCHHHHH-HHHHHHT--TTSEEEESCCEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh------cCHHHHH-HHHHHHH--hCcEEEeCCeEEEEecc
Confidence 469999999999999999998 699999999987643110 0000000 0000000 0133322 222233221
Q ss_pred ---eEEecCCeEEeCCEEEEccCCCCCC
Q 023957 91 ---EVLTAEGRRVVYDYLVIATGHKDPV 115 (275)
Q Consensus 91 ---~v~~~~~~~~~~~~lilatG~~~~~ 115 (275)
.....++.++.+|.+++|+|..|..
T Consensus 219 ~~v~~v~~~g~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 219 ERVEKVVTDAGEYKAELVILATGIKPNI 246 (449)
T ss_dssp SSCCEEEETTEEEECSEEEECSCEEECC
T ss_pred CcEEEEEeCCCEEECCEEEEeeCCccCH
Confidence 2234467789999999999998765
No 246
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.77 E-value=1.8e-05 Score=69.47 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh--cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ--FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~--~g~~v~vie~~~ 45 (275)
..||+||||||.||+.+|.+|. .+.+|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4699999999999999999998 489999999987
No 247
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.75 E-value=3.2e-05 Score=66.25 Aligned_cols=96 Identities=17% Similarity=0.266 Sum_probs=58.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+... + ....... +....+ ..+++++.. .+..+..
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---~----~~~~~~~-l~~~l~-~~gv~i~~~~~v~~i~~~ 241 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN---E----DADVSKE-IEKQFK-KLGVTILTATKVESIADG 241 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---S----CHHHHHH-HHHHHH-HHTCEEECSCEEEEEEEC
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc---c----CHHHHHH-HHHHHH-HcCCEEEeCcEEEEEEEc
Confidence 579999999999999999998 69999999998764311 0 0000000 000000 013444332 2233322
Q ss_pred -C--eEEec-CC--eEEeCCEEEEccCCCCCCCc
Q 023957 90 -N--EVLTA-EG--RRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 90 -~--~v~~~-~~--~~~~~~~lilatG~~~~~~~ 117 (275)
. .+.+. ++ .++.+|.+++|+|..|....
T Consensus 242 ~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 242 GSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp SSCEEEEEESSSCEEEEEESEEEECSCEEECCSS
T ss_pred CCeEEEEEEcCCceEEEEcCEEEECCCCCccCCC
Confidence 1 23332 45 67899999999999877654
No 248
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.74 E-value=4.1e-05 Score=65.96 Aligned_cols=97 Identities=16% Similarity=0.285 Sum_probs=61.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEE-eeeeEeec
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVA-SPAINITE 89 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (275)
...+++|||+|+.|+.+|..|+ .|.+|+++++.+.+.... ....... +..... ..+++++. ..+..+..
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~-------~~~~~~~-l~~~l~-~~Gv~i~~~~~V~~i~~ 260 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNF-------DYDLRQL-LNDAMV-AKGISIIYEATVSQVQS 260 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CHHHHHH-HHHHHH-HHTCEEESSCCEEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccccc-------CHHHHHH-HHHHHH-HCCCEEEeCCEEEEEEe
Confidence 3579999999999999999998 699999999987643110 0000000 000000 01444443 23333432
Q ss_pred C----eEEecCCeEEeCCEEEEccCCCCCCCc
Q 023957 90 N----EVLTAEGRRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 90 ~----~v~~~~~~~~~~~~lilatG~~~~~~~ 117 (275)
. .+.+.++..+.+|.+++|+|..|....
T Consensus 261 ~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 261 TENCYNVVLTNGQTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp CSSSEEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred eCCEEEEEECCCcEEEcCEEEEeeCCCcCCCC
Confidence 2 577778888999999999998876653
No 249
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.73 E-value=9.4e-05 Score=60.99 Aligned_cols=89 Identities=18% Similarity=0.144 Sum_probs=68.1
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCccc-------C--------cC----CcchHHHHHHHHHhCCCEEEcCceeee
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-------E--------FI----GPKAGDKTRDWLISKKVDVKLGERVNL 189 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~-------~--------~~----~~~~~~~~~~~~~~~gv~i~~~~~v~~ 189 (275)
+|..|+..|..+. ..+.+++++++.+.+. + .+ ...+.+.+.+.+++.|++++.+++|+.
T Consensus 22 ~G~aGl~aA~~l~--~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~ 99 (360)
T 3ab1_A 22 GGPTGIFAAFQCG--MNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTK 99 (360)
T ss_dssp CSHHHHHHHHHHH--HTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEE
T ss_pred CCHHHHHHHHHHH--hCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEE
Confidence 6777888888887 4588999999875431 0 11 134556667777888999999999999
Q ss_pred ecCCCC-CceEEcCCCcEEeecEEEEcCCCC
Q 023957 190 DSVSEG-SDTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 190 i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
++..++ .+.+.+.+|+++.+|.||+|+|..
T Consensus 100 i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 100 YTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp EEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred EEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 987654 567888888889999999999984
No 250
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.72 E-value=3.1e-05 Score=67.32 Aligned_cols=94 Identities=16% Similarity=0.222 Sum_probs=59.0
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec--
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE-- 89 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 89 (275)
.+++|||||..|+.+|..|+ .|.+|+++++.+.+... + ............. ..+++++.. .+..+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~---~----~~~~~~~l~~~l~--~~GV~i~~~~~V~~i~~~~ 285 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI---K----DNETRAYVLDRMK--EQGMEIISGSNVTRIEEDA 285 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC---C----SHHHHHHHHHHHH--HTTCEEESSCEEEEEEECT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc---c----cHHHHHHHHHHHH--hCCcEEEECCEEEEEEEcC
Confidence 79999999999999999998 69999999998764311 0 0000000000000 013444322 2333321
Q ss_pred C------eEEecCCe-EEeCCEEEEccCCCCCCC
Q 023957 90 N------EVLTAEGR-RVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 ~------~v~~~~~~-~~~~~~lilatG~~~~~~ 116 (275)
. .+.+.+|. ++.+|.+++|+|..|...
T Consensus 286 ~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 286 NGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp TSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred CCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 1 35566776 899999999999998764
No 251
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.70 E-value=2.7e-05 Score=66.48 Aligned_cols=96 Identities=20% Similarity=0.310 Sum_probs=58.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec-
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE- 89 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 89 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+... ............... ..++++... .+..+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------~~~~~~~~~l~~~l~--~~Gv~i~~~~~v~~i~~~ 220 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK------YFDKEFTDILAKDYE--AHGVNLVLGSKVAAFEEV 220 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT------TSCHHHHHHHHHHHH--HTTCEEEESSCEEEEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh------hhhhhHHHHHHHHHH--HCCCEEEcCCeeEEEEcC
Confidence 578999999999999999998 69999999998754310 000000000000000 014444432 2333332
Q ss_pred -CeE--EecCCeEEeCCEEEEccCCCCCCC
Q 023957 90 -NEV--LTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 -~~v--~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
..+ ...++.++.+|.+++|+|..|..+
T Consensus 221 ~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 221 DDEIITKTLDGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp TTEEEEEETTSCEEEESEEEECCCEEECCG
T ss_pred CCeEEEEEeCCCEEECCEEEECcCCCCCHH
Confidence 221 223677899999999999987764
No 252
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.69 E-value=6.7e-05 Score=64.44 Aligned_cols=94 Identities=18% Similarity=0.290 Sum_probs=57.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEEe-eeeEe
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINI 87 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~ 87 (275)
...+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.... .. .......+.+ .+++++.. .+..+
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~----~~~~~l~~~l~~~Gv~v~~~~~v~~i 247 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAV-------DE----QVAKEAQKILTKQGLKILLGARVTGT 247 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTS-------CH----HHHHHHHHHHHHTTEEEEETCEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCccc-------CH----HHHHHHHHHHHhCCCEEEECCEEEEE
Confidence 3578999999999999999998 699999999987653110 00 0000000000 14444432 33333
Q ss_pred e--cC--eEEecCC---eEEeCCEEEEccCCCCCCC
Q 023957 88 T--EN--EVLTAEG---RRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 88 ~--~~--~v~~~~~---~~~~~~~lilatG~~~~~~ 116 (275)
. .. .+.+.++ ..+.+|.+++|+|..|...
T Consensus 248 ~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 248 EVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EECSSCEEEEEESSSEEEEEEESEEEECSCEEECCT
T ss_pred EEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCC
Confidence 3 11 3444433 5789999999999876553
No 253
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.69 E-value=3.1e-05 Score=67.63 Aligned_cols=40 Identities=28% Similarity=0.390 Sum_probs=34.3
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-c-CCcEEEEcCCCCcc
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFE 48 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~-g~~v~vie~~~~~~ 48 (275)
++...+|++|||+|++|+.+|++|. . +.+|+|+|+.....
T Consensus 9 ~~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 9 LSDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CCCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred cccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 3445699999999999999999997 4 89999999987653
No 254
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.68 E-value=3e-05 Score=68.04 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g-~~v~vie~~~~ 46 (275)
..||+||||||.||+.+|.+|. .+ .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3599999999999999999998 44 79999999876
No 255
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.68 E-value=2.9e-05 Score=66.77 Aligned_cols=95 Identities=18% Similarity=0.271 Sum_probs=57.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEE-eeeeEeec
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVA-SPAINITE 89 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 89 (275)
..++|+|||||+.|+.+|..|+ .|.+|+++++.+.+.... .............+ .++++.. ..+..+..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------~~~~~~~l~~~l~~--~Gv~i~~~~~v~~i~~ 255 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIY-------DGDMAEYIYKEADK--HHIEILTNENVKAFKG 255 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSS-------CHHHHHHHHHHHHH--TTCEEECSCCEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcC-------CHHHHHHHHHHHHH--cCcEEEcCCEEEEEEc
Confidence 4579999999999999999998 699999999987543210 00000000000000 1344432 22233322
Q ss_pred C----eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 90 N----EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 90 ~----~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
. .+.+ ++.++.+|.+++|+|..|..+
T Consensus 256 ~~~v~~v~~-~~~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 256 NERVEAVET-DKGTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp SSBEEEEEE-TTEEEECSEEEECSCEEESCG
T ss_pred CCcEEEEEE-CCCEEEcCEEEECcCCCcChH
Confidence 1 2344 345899999999999886653
No 256
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.68 E-value=4.6e-05 Score=65.35 Aligned_cols=98 Identities=19% Similarity=0.282 Sum_probs=58.1
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (275)
...+++|||||+.|+.+|..|+ .|.+|+++++.+.+.... +..... .+........+++++.. .+..+..
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------d~~~~~-~l~~~l~~~~gv~i~~~~~v~~i~~ 244 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTL-------DEDVTN-ALVGALAKNEKMKFMTSTKVVGGTN 244 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CHHHHH-HHHHHHHHHTCCEEECSCEEEEEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccC-------CHHHHH-HHHHHHhhcCCcEEEeCCEEEEEEE
Confidence 3478999999999999999998 699999999987653110 000000 00000000024444332 3333332
Q ss_pred --C--eEEec--CC--eEEeCCEEEEccCCCCCCCc
Q 023957 90 --N--EVLTA--EG--RRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 90 --~--~v~~~--~~--~~~~~~~lilatG~~~~~~~ 117 (275)
. .+.+. ++ ..+.+|.+++|+|..|....
T Consensus 245 ~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 280 (468)
T 2qae_A 245 NGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGG 280 (468)
T ss_dssp CSSSEEEEEECC---EEEEEESEEEECSCEEECCTT
T ss_pred cCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCC
Confidence 1 33433 45 57899999999999877643
No 257
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.68 E-value=5e-05 Score=65.08 Aligned_cols=37 Identities=19% Similarity=0.313 Sum_probs=32.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~ 48 (275)
...+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 208 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL 208 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC
Confidence 3578999999999999999998 699999999987653
No 258
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.67 E-value=0.00015 Score=58.37 Aligned_cols=92 Identities=20% Similarity=0.163 Sum_probs=67.0
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCC--ccc---------C---cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCC
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGS--RLL---------E---FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSE 194 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~--~~~---------~---~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~ 194 (275)
+|+.|+..|..+. ..+.++.++.+.. ... . ...+.+.+.+.+.+++.|++++.+++|..+..+.
T Consensus 9 ~G~aGl~aA~~l~--~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~ 86 (310)
T 1fl2_A 9 SGPAGAAAAIYSA--RKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAA 86 (310)
T ss_dssp CSHHHHHHHHHHH--TTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCS
T ss_pred cCHHHHHHHHHHH--HCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecc
Confidence 6778888998888 5688898886531 110 0 0012455667777888899999999999996542
Q ss_pred ---CCceEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 195 ---GSDTYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 195 ---~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
+.+.+.+.+|+++.+|.+|+|+|..|..
T Consensus 87 ~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 87 VEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp STTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred cCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 2566778888889999999999987643
No 259
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.66 E-value=7.4e-05 Score=64.47 Aligned_cols=95 Identities=18% Similarity=0.205 Sum_probs=58.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEEe-eeeEe
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINI 87 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~ 87 (275)
...+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.... .... .....+.+ .++++... .+..+
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------d~~~----~~~l~~~l~~~gV~v~~~~~v~~i 265 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGM-------DGEV----AKQLQRMLTKQGIDFKLGAKVTGA 265 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSS-------CHHH----HHHHHHHHHHTTCEEECSEEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccC-------CHHH----HHHHHHHHHhCCCEEEECCeEEEE
Confidence 3578999999999999999998 699999999987653110 0000 00000000 13444322 22233
Q ss_pred e--cC--eEEecC---C--eEEeCCEEEEccCCCCCCCc
Q 023957 88 T--EN--EVLTAE---G--RRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 88 ~--~~--~v~~~~---~--~~~~~~~lilatG~~~~~~~ 117 (275)
. .. .+.+.+ + ..+.+|.+++|+|..|....
T Consensus 266 ~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 266 VKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTT
T ss_pred EEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCc
Confidence 2 12 233321 4 57899999999999877654
No 260
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.66 E-value=0.00012 Score=59.65 Aligned_cols=90 Identities=21% Similarity=0.314 Sum_probs=56.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEE-eeeeEeecC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVA-SPAINITEN 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 90 (275)
..+|+|||+|..|+.+|..|+ .+.+|+++++.+.+... .....+ ... ..+++++. ..+..+...
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~---------~~~~~~-~~~----~~gV~v~~~~~v~~i~~~ 220 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS---------KIMLDR-ARN----NDKIRFLTNHTVVAVDGD 220 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC---------TTHHHH-HHH----CTTEEEECSEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc---------HHHHHH-Hhc----cCCcEEEeCceeEEEecC
Confidence 578999999999999999998 59999999998765210 000000 000 12444432 223333322
Q ss_pred ----eEEec---CC--eEEeCCEEEEccCCCCCCC
Q 023957 91 ----EVLTA---EG--RRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 91 ----~v~~~---~~--~~~~~~~lilatG~~~~~~ 116 (275)
.+.+. ++ ..+.+|.+++|+|..|..+
T Consensus 221 ~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (335)
T 2a87_A 221 TTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSG 255 (335)
T ss_dssp SSCCEEEEEEETTSCCEEECCSCEEECSCEEECCT
T ss_pred CcEeEEEEEEcCCCceEEeecCEEEEccCCccChh
Confidence 24432 33 5789999999999887654
No 261
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.66 E-value=5e-05 Score=66.94 Aligned_cols=57 Identities=9% Similarity=-0.131 Sum_probs=46.8
Q ss_pred cchHHHHHHHHHhCCCEEEcCceeeeecCCC--CCc-eEEcCCCcEEeecEEEEcCCCCC
Q 023957 164 PKAGDKTRDWLISKKVDVKLGERVNLDSVSE--GSD-TYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 164 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
..+.+.+.+.++..|.+|+++++|.+|..++ +.+ .++..+|+++.||.||......|
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp 437 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLS 437 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBC
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcC
Confidence 3688889999999999999999999987665 444 35567799999999999877665
No 262
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.65 E-value=4.4e-05 Score=65.33 Aligned_cols=93 Identities=15% Similarity=0.202 Sum_probs=59.6
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccc--cccEEEE-eeeeEe
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVA-SPAINI 87 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~ 87 (275)
...+++|||||+.|+.+|..|+ .|.+|+++++.+.+.... .+ .......+.+ .+++++. ..+..+
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~-------~~----~~~~~l~~~l~~~Gv~i~~~~~v~~i 237 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRF-------DQ----DMRRGLHAAMEEKGIRILCEDIIQSV 237 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS-------CH----HHHHHHHHHHHHTTCEEECSCCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccccc-------CH----HHHHHHHHHHHHCCCEEECCCEEEEE
Confidence 3578999999999999999998 699999999987543110 00 0000000000 1445543 233333
Q ss_pred ecC-----eEE-ecCCeEEeCCEEEEccCCCCCCC
Q 023957 88 TEN-----EVL-TAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 88 ~~~-----~v~-~~~~~~~~~~~lilatG~~~~~~ 116 (275)
... .+. +.+++ +.+|.+++|+|..|...
T Consensus 238 ~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 238 SADADGRRVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp EECTTSCEEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred EEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 321 466 77787 99999999999886654
No 263
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.64 E-value=2.4e-05 Score=68.46 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=31.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh--cCCcEEEEcCCCCc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ--FSADVTLIDPKEYF 47 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~--~g~~v~vie~~~~~ 47 (275)
.||++|||||.||+.+|.+|. .+.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 489999999999999999997 48999999998765
No 264
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.63 E-value=8.6e-05 Score=59.82 Aligned_cols=90 Identities=17% Similarity=0.195 Sum_probs=56.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEE-EeeeeEeecC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIV-ASPAINITEN 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 90 (275)
..+|+|||+|+.|+.+|..|. .+.+|+++++.+.+....... .+.. ...+++++ ...+..+...
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~---------~~~~-----~~~gv~~~~~~~v~~i~~~ 212 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTV---------EKVK-----KNEKIELITSASVDEVYGD 212 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSCHHHH---------HHHH-----HCTTEEEECSCEEEEEEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCCHHHH---------HHHH-----hcCCeEEEeCcEEEEEEcC
Confidence 478999999999999999998 599999999988653111000 0000 01234443 2222333211
Q ss_pred -----eEEec--CCe--EEeCCEEEEccCCCCCCC
Q 023957 91 -----EVLTA--EGR--RVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 91 -----~v~~~--~~~--~~~~~~lilatG~~~~~~ 116 (275)
.+.+. +|. ++.+|.+++|+|..|...
T Consensus 213 ~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 247 (315)
T 3r9u_A 213 KMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNE 247 (315)
T ss_dssp TTEEEEEEEECTTSCEEEECCSCEEECSCEEECCG
T ss_pred CCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCch
Confidence 23333 664 789999999999887653
No 265
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.63 E-value=6.4e-05 Score=63.85 Aligned_cols=94 Identities=15% Similarity=0.145 Sum_probs=67.3
Q ss_pred CCcchhhHHHHHhh-hCCCCEEEEEeCCCcccCc----------C-CcchHHHHHHHHHhCCCEEEcCceeeeecCCCCC
Q 023957 129 GGPTGVELAGEIAV-DFPEKKVTLVHKGSRLLEF----------I-GPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS 196 (275)
Q Consensus 129 ~g~~~~~~a~~l~~-~~~~~~v~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~ 196 (275)
+|..|+..|..|+. ...+.+++++++.+.+... . ..++...+.+.+++.|++++. .+|+.++.+++
T Consensus 12 gG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~~- 89 (437)
T 3sx6_A 12 AGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQIDAEAQ- 89 (437)
T ss_dssp CSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEEEETTTT-
T ss_pred CcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEEEEcCCC-
Confidence 67788888988884 1268899999988754210 0 011222245667788999985 68888876543
Q ss_pred ceEEcCCCcEEeecEEEEcCCCCCCchhh
Q 023957 197 DTYLTSTGDTINADCHFLCTGKPVGSDWL 225 (275)
Q Consensus 197 ~~v~~~~g~~~~~d~vv~a~G~~~~~~~~ 225 (275)
.+.+.+|+++.+|.+|+|+|..|+...+
T Consensus 90 -~V~~~~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 90 -NITLADGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp -EEEETTSCEEECSEEEECCCCEECGGGS
T ss_pred -EEEECCCCEEECCEEEECCCCCcCcccC
Confidence 6778888889999999999998765433
No 266
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.62 E-value=8.4e-05 Score=64.12 Aligned_cols=96 Identities=21% Similarity=0.263 Sum_probs=58.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-----cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeE
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-----FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAIN 86 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-----~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 86 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+..... .+. ..........+.+ .++++... .+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~--~l~----~~~~~~~~~~l~~--~GV~v~~~~~V~~ 251 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK--ILP----EYLSNWTMEKVRR--EGVKVMPNAIVQS 251 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT--TSC----HHHHHHHHHHHHT--TTCEEECSCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc--cCC----HHHHHHHHHHHHh--cCCEEEeCCEEEE
Confidence 478999999999999999885 27899999987542110 000 0000000000000 14444433 2333
Q ss_pred ee--cC--eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 87 IT--EN--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 87 ~~--~~--~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
+. .. .+.+.+|.++.+|.+++|+|..|...
T Consensus 252 i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 252 VGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred EEecCCeEEEEECCCCEEECCEEEECCCCCccHH
Confidence 32 22 46677888999999999999987764
No 267
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.62 E-value=3.8e-05 Score=65.90 Aligned_cols=95 Identities=15% Similarity=0.247 Sum_probs=56.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEE-eeeeEeecC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVA-SPAINITEN 90 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 90 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.... ....... +....+ ..+++++. ..+..+...
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~-------~~~~~~~-l~~~l~-~~gv~i~~~~~v~~i~~~ 247 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTM-------DAEIRKQ-FQRSLE-KQGMKFKLKTKVVGVDTS 247 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS-------CHHHHHH-HHHHHH-HSSCCEECSEEEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccc-------cHHHHHH-HHHHHH-HcCCEEEeCCEEEEEEEc
Confidence 578999999999999999998 699999999987653110 0000000 000000 01334432 233333321
Q ss_pred ----eEEec---CC--eEEeCCEEEEccCCCCCCC
Q 023957 91 ----EVLTA---EG--RRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 91 ----~v~~~---~~--~~~~~~~lilatG~~~~~~ 116 (275)
.+.+. ++ ..+.+|.+++|+|..|...
T Consensus 248 ~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 248 GDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp SSSEEEEEEESSSCCCEEEEESEEECCCCEEECCT
T ss_pred CCeEEEEEEecCCCcceEEECCEEEECCCCCcCCC
Confidence 23332 33 6789999999999887653
No 268
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.61 E-value=0.00011 Score=59.89 Aligned_cols=91 Identities=19% Similarity=0.127 Sum_probs=69.0
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCC----ccc------------CcC-----CcchHHHHHHHHHhCCCEEEcCcee
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGS----RLL------------EFI-----GPKAGDKTRDWLISKKVDVKLGERV 187 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~----~~~------------~~~-----~~~~~~~~~~~~~~~gv~i~~~~~v 187 (275)
+|..|+..|..|.. .+.+++++++.+ ... +.+ ..++.+.+.+.+++.|++++.++ |
T Consensus 30 ~G~aGl~aA~~l~~--~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v 106 (338)
T 3itj_A 30 SGPAAHTAAIYLAR--AEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITET-V 106 (338)
T ss_dssp CSHHHHHHHHHHHH--TTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECSC-E
T ss_pred cCHHHHHHHHHHHH--CCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEEEEeE-E
Confidence 77788889999884 588899999843 110 111 12566777788888999999988 9
Q ss_pred eeecCCCCCceEEc---CCCcEEeecEEEEcCCCCCCc
Q 023957 188 NLDSVSEGSDTYLT---STGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 188 ~~i~~~~~~~~v~~---~~g~~~~~d~vv~a~G~~~~~ 222 (275)
..++.+++.+.+.+ .++..+.+|.+|+|+|..|..
T Consensus 107 ~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 107 SKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp EEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred EEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 99988777777766 366789999999999987653
No 269
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.61 E-value=6.5e-05 Score=64.55 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=31.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~ 47 (275)
..+|+|||||..|+.+|..|+ .|.+|+++++.+.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 479999999999999999998 69999999997764
No 270
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.59 E-value=0.00019 Score=57.75 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=66.9
Q ss_pred CCcchhhHHHHHhhhCCCC-EEEEEeCCCc---c--------cCcC----C-cchHHHHHHHHHhCCCEEEcCceeeeec
Q 023957 129 GGPTGVELAGEIAVDFPEK-KVTLVHKGSR---L--------LEFI----G-PKAGDKTRDWLISKKVDVKLGERVNLDS 191 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~-~v~~~~~~~~---~--------~~~~----~-~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 191 (275)
+|+.|+..|..+.. .+. ++.++++... . .+.+ . ..+.+.+.+.+++.|++++. .+|..++
T Consensus 9 ~G~aGl~aA~~l~~--~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~ 85 (311)
T 2q0l_A 9 GGPAGLSAGLYATR--GGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVS 85 (311)
T ss_dssp CSHHHHHHHHHHHH--TTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEE
T ss_pred ccHHHHHHHHHHHH--CCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEE
Confidence 67788888988884 477 8999987521 0 1111 1 23556667777888999988 7888887
Q ss_pred CCCCCceEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 192 VSEGSDTYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 192 ~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
.+++.+.+.+.+|+++.+|.||+|+|..|..
T Consensus 86 ~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 86 KKDSHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EETTEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EcCCEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 7666666777888889999999999976643
No 271
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.59 E-value=5e-05 Score=61.34 Aligned_cols=36 Identities=33% Similarity=0.559 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~ 48 (275)
.++|+|||||+.|+.+|..|+ .|.+|+|+|+.+.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 468999999999999999998 599999999987653
No 272
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.59 E-value=5e-05 Score=65.75 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=32.6
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~ 47 (275)
..+|++|||+|++|+.+|.+|. .|.+|+|+|+....
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4589999999999999999998 69999999998754
No 273
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.57 E-value=5.1e-05 Score=65.67 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=32.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~ 48 (275)
.+|++|||+|++|+.+|++|. .|.+|+|+|+.....
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 489999999999999999998 699999999988554
No 274
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.53 E-value=9.5e-05 Score=63.33 Aligned_cols=93 Identities=19% Similarity=0.293 Sum_probs=56.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEee--
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT-- 88 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 88 (275)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+.. . .+........... ..++++... .+..+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~-------~~~~~~~l~~~l~--~~Gv~i~~~~~v~~i~~~ 245 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-E-------DPAIGEAVTAAFR--AEGIEVLEHTQASQVAHM 245 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-S-------CHHHHHHHHHHHH--HTTCEEETTCCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-C-------CHHHHHHHHHHHH--hCCCEEEcCCEEEEEEEe
Confidence 578999999999999999998 6999999999875431 0 0000000000000 013344321 222332
Q ss_pred cC--eEEecCCeEEeCCEEEEccCCCCCCC
Q 023957 89 EN--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 89 ~~--~v~~~~~~~~~~~~lilatG~~~~~~ 116 (275)
.. .+.++ +.++.+|.+++|+|..|...
T Consensus 246 ~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 246 DGEFVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp TTEEEEEET-TEEEEESEEEECSCEEESCT
T ss_pred CCEEEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 12 34444 56789999999999887653
No 275
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.53 E-value=0.00034 Score=57.73 Aligned_cols=89 Identities=19% Similarity=0.123 Sum_probs=65.4
Q ss_pred CCcchhhHHHHHhhhCCCC-EEEEEeCCCccc--------------C-------cC---------------------C-c
Q 023957 129 GGPTGVELAGEIAVDFPEK-KVTLVHKGSRLL--------------E-------FI---------------------G-P 164 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~-~v~~~~~~~~~~--------------~-------~~---------------------~-~ 164 (275)
+|..|+..|..+.. .+. +++++++.+ +. + .. . .
T Consensus 12 aG~aGl~aA~~l~~--~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (369)
T 3d1c_A 12 AGAAGIGMAITLKD--FGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGE 88 (369)
T ss_dssp CSHHHHHHHHHHHH--TTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSSCBHH
T ss_pred cCHHHHHHHHHHHH--cCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccccCCCHH
Confidence 67788888988884 466 899998774 10 0 00 0 1
Q ss_pred chHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 165 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 165 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
.+.+.+.+.+++.|++++.+++|.+++.+++.+.+.+.++ ++.+|.||+|+|..+.
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 2334456667788999999999999987666677777777 4999999999998754
No 276
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.52 E-value=7e-05 Score=66.00 Aligned_cols=37 Identities=32% Similarity=0.469 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh--cCCcEEEEcCCCCc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ--FSADVTLIDPKEYF 47 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~--~g~~v~vie~~~~~ 47 (275)
...+|++|||+|++|+.+|.+|. .+.+|+|+|+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 34589999999999999999997 48999999998754
No 277
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.52 E-value=0.00014 Score=62.68 Aligned_cols=96 Identities=14% Similarity=0.138 Sum_probs=55.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEee-
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT- 88 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 88 (275)
...+++|||||+.|+.+|..|+ .|.+|+++++...+... ............. ..+++++.. .+..+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~--------d~~~~~~l~~~l~--~~gv~~~~~~~v~~i~~ 253 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGF--------DQQMSSLVTEHME--SHGTQFLKGCVPSHIKK 253 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTS--------CHHHHHHHHHHHH--HTTCEEEETEEEEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccccC--------CHHHHHHHHHHHH--HCCCEEEeCCEEEEEEE
Confidence 3468999999999999999998 69999999986432110 0000000000000 014454432 222332
Q ss_pred --cC--eEEecC---Ce--EEeCCEEEEccCCCCCCCc
Q 023957 89 --EN--EVLTAE---GR--RVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 89 --~~--~v~~~~---~~--~~~~~~lilatG~~~~~~~ 117 (275)
.. .+.+.+ ++ ++.+|.+++|+|..|....
T Consensus 254 ~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 254 LPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRT 291 (488)
T ss_dssp CTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGG
T ss_pred cCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCc
Confidence 11 233322 44 4789999999998877643
No 278
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.52 E-value=0.00012 Score=63.06 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=55.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEeec
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (275)
...+++|||||+.|+.+|..|+ .|.+|+++++...+......+...+. .... ..+++++.. .+..+..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~d~~~~~~l~--------~~l~--~~Gv~i~~~~~v~~i~~ 255 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVA--------ASME--ERGIPFLRKTVPLSVEK 255 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTTSCHHHHHHHH--------HHHH--HTTCCEEETEEEEEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcccCHHHHHHHH--------HHHH--hCCCEEEeCCEEEEEEE
Confidence 3468999999999999999998 69999999985432110000000000 0000 013444332 2233321
Q ss_pred --C---eEEecCC-----eEEeCCEEEEccCCCCCCCc
Q 023957 90 --N---EVLTAEG-----RRVVYDYLVIATGHKDPVPK 117 (275)
Q Consensus 90 --~---~v~~~~~-----~~~~~~~lilatG~~~~~~~ 117 (275)
. .+.+.++ ..+.+|.+++|+|..|....
T Consensus 256 ~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~ 293 (483)
T 3dgh_A 256 QDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDD 293 (483)
T ss_dssp CTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGG
T ss_pred cCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCc
Confidence 1 2444333 26899999999998876543
No 279
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.51 E-value=0.00028 Score=57.36 Aligned_cols=90 Identities=21% Similarity=0.063 Sum_probs=66.3
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeC----CCccc------------CcC-----CcchHHHHHHHHHhCCCEEEcCcee
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHK----GSRLL------------EFI-----GPKAGDKTRDWLISKKVDVKLGERV 187 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~----~~~~~------------~~~-----~~~~~~~~~~~~~~~gv~i~~~~~v 187 (275)
+|..|+.+|..+.. .+.+++++++ ..... +.+ ...+.+.+.+.+++.|++++.++ |
T Consensus 16 ~G~aGl~~A~~l~~--~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v 92 (333)
T 1vdc_A 16 SGPAAHTAAIYAAR--AELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIFTET-V 92 (333)
T ss_dssp CSHHHHHHHHHHHH--TTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECCC-C
T ss_pred cCHHHHHHHHHHHH--CCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEEEeE-E
Confidence 67788888888884 4788999987 22110 111 12455667777888999999987 8
Q ss_pred eeecCCCCCceEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 188 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 188 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
..++..++.+.+.+ +|+++.+|.||+|+|..|..
T Consensus 93 ~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 93 TKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred EEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 88887666677777 77889999999999987643
No 280
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.49 E-value=0.00023 Score=62.22 Aligned_cols=91 Identities=16% Similarity=0.138 Sum_probs=67.9
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccC---------------------cC----------------CcchHHHHH
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------------------FI----------------GPKAGDKTR 171 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~---------------------~~----------------~~~~~~~~~ 171 (275)
+|..|+.+|..|.. .+.+++++++.+.+.. .+ .+++.+.+.
T Consensus 29 aG~aGl~aA~~L~~--~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~ 106 (549)
T 4ap3_A 29 AGIAGLYAIHRFRS--QGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEILAYLE 106 (549)
T ss_dssp CSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHHHHHHH
T ss_pred chHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHHHHHHH
Confidence 67788888888884 6789999998653210 00 123455566
Q ss_pred HHHHhCCC--EEEcCceeeeecCCCC--CceEEcCCCcEEeecEEEEcCC--CCCC
Q 023957 172 DWLISKKV--DVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTG--KPVG 221 (275)
Q Consensus 172 ~~~~~~gv--~i~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G--~~~~ 221 (275)
+.+++.|+ +++.+++|++++.+++ .+.|.+.+|+++.||.||+|+| ..|.
T Consensus 107 ~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 107 HVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN 162 (549)
T ss_dssp HHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC
T ss_pred HHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 77788888 8999999999976554 5678888999999999999999 4444
No 281
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.46 E-value=0.00027 Score=60.25 Aligned_cols=94 Identities=18% Similarity=0.154 Sum_probs=67.9
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCccc--Cc-C----C------cchHHHHHHHHHhCCCEEEcCceeeeecCCCC
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--EF-I----G------PKAGDKTRDWLISKKVDVKLGERVNLDSVSEG 195 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~--~~-~----~------~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~ 195 (275)
+|..|+..|..++...++.+++++++.+.+. +. . . ..+.....+.+++.|++++.+++|..++..++
T Consensus 10 gG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~ 89 (452)
T 3oc4_A 10 ASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVVAMDVENQ 89 (452)
T ss_dssp CSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEEEEETTTT
T ss_pred CCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEEEEECCCC
Confidence 6788999999998766689999999887543 10 0 0 01111134566778999999999999987766
Q ss_pred CceEE-cCCCcEEeecEEEEcCCCCCCc
Q 023957 196 SDTYL-TSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 196 ~~~v~-~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
.+.+. ..+++++.+|.+|+|+|.+|..
T Consensus 90 ~v~v~~~~~~~~~~~d~lviAtG~~p~~ 117 (452)
T 3oc4_A 90 LIAWTRKEEQQWYSYDKLILATGASQFS 117 (452)
T ss_dssp EEEEEETTEEEEEECSEEEECCCCCBCC
T ss_pred EEEEEecCceEEEEcCEEEECCCcccCC
Confidence 65554 3356689999999999998754
No 282
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.44 E-value=0.00053 Score=55.56 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=65.5
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCc---c--------cCcC-----CcchHHHHHHHHHhCCCEEEcCceeeeecC
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSR---L--------LEFI-----GPKAGDKTRDWLISKKVDVKLGERVNLDSV 192 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~---~--------~~~~-----~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 192 (275)
+|+.|+..|..+.. .+.++.++++... + .+.+ ...+.+.+.+.+++.|++++. .+|..++.
T Consensus 16 ~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~ 92 (325)
T 2q7v_A 16 GGPAGLTAAIYTGR--AQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQH 92 (325)
T ss_dssp CSHHHHHHHHHHHH--TTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEE
T ss_pred CCHHHHHHHHHHHH--cCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEe
Confidence 67778888888874 5789999998721 0 0111 124556667778889999987 57888876
Q ss_pred C--CCC-ceEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 193 S--EGS-DTYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 193 ~--~~~-~~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
. ++. +.+.+.+|+++.+|.||+|+|..|..
T Consensus 93 ~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 93 DATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp CTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred ccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 5 333 56777788899999999999987643
No 283
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.42 E-value=0.00013 Score=62.41 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCc
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYF 47 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~~ 47 (275)
.++|+|||||.+|+-+|..|. . +.+|+++++.+.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 578999999999999999997 4 8899999998864
No 284
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.42 E-value=8.9e-05 Score=62.81 Aligned_cols=89 Identities=18% Similarity=0.175 Sum_probs=63.6
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccC--c--------CC-cchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE--F--------IG-PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD 197 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~--~--------~~-~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~ 197 (275)
+|..|+.+|..|+...++.+|+++++.+.+.- . .. .++...+.+.+++.|++++.+ +|+.|+.++ .
T Consensus 10 gG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~Id~~~--~ 86 (430)
T 3hyw_A 10 GGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESIDPDA--N 86 (430)
T ss_dssp SSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEEETTT--T
T ss_pred CCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEEECCC--C
Confidence 67788899999987667789999998875321 0 00 011111234456679999875 688887544 3
Q ss_pred eEEcCCCcEEeecEEEEcCCCCC
Q 023957 198 TYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 198 ~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
.|++++|+++++|.+|+|+|.++
T Consensus 87 ~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 87 TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp EEEETTCCEEECSEEEECCCCEE
T ss_pred EEEECCCCEEECCEEEEeCCCCc
Confidence 57888999999999999999864
No 285
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.41 E-value=0.00035 Score=60.67 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
...+++|||||+.|+.+|..|+ .|.+|+++++..
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~ 243 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI 243 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc
Confidence 3467999999999999999998 699999999853
No 286
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.31 E-value=0.00067 Score=58.93 Aligned_cols=91 Identities=20% Similarity=0.192 Sum_probs=68.1
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCC--cccC------------cCCcchHHHHHHHHHhCCCEEEcCceeeeecCC-
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGS--RLLE------------FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS- 193 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~--~~~~------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~- 193 (275)
+|+.|+..|..++ ..+.++.++.+.. .... ...+.+...+.+.+++.|++++.+++|..+..+
T Consensus 220 gG~AGl~aA~~la--~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~ 297 (521)
T 1hyu_A 220 SGPAGAAAAVYSA--RKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAA 297 (521)
T ss_dssp CSHHHHHHHHHHH--HTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCS
T ss_pred CcHHHHHHHHHHH--hCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEecc
Confidence 8999999999998 4588898887532 1100 011245666777888899999999999999643
Q ss_pred --CCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 194 --EGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 194 --~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
++.+.+.+.+|+++.+|.||+|+|..|.
T Consensus 298 ~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 298 TEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp STTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 2256688888888999999999997664
No 287
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.30 E-value=0.00067 Score=54.72 Aligned_cols=90 Identities=14% Similarity=0.167 Sum_probs=65.0
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCc---c--------cCcC-----CcchHHHHHHHHHhCCCEEEcCceeeeecC
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSR---L--------LEFI-----GPKAGDKTRDWLISKKVDVKLGERVNLDSV 192 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~---~--------~~~~-----~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 192 (275)
+|..|+..|..+. ..+.+++++++... + .+.+ .+.+.+.+.+.+++.|++++.++ +..++.
T Consensus 13 ~G~aGl~aA~~l~--~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~ 89 (320)
T 1trb_A 13 SGPAGYTAAVYAA--RANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-INKVDL 89 (320)
T ss_dssp CSHHHHHHHHHHH--TTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEEC
T ss_pred cCHHHHHHHHHHH--HCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEe
Confidence 6778888888888 45788888885321 0 0111 12455666777788999999986 888877
Q ss_pred CCCCceEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 193 SEGSDTYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 193 ~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
.++.+.+ +.+++++.+|.+|+|+|..|..
T Consensus 90 ~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 90 QNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp SSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred cCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 6666666 6677889999999999987643
No 288
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.28 E-value=0.00029 Score=59.17 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=66.2
Q ss_pred CCcchhhHHHHHhh-hCCCCEEEEEeCCCcccC-----------cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCC
Q 023957 129 GGPTGVELAGEIAV-DFPEKKVTLVHKGSRLLE-----------FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS 196 (275)
Q Consensus 129 ~g~~~~~~a~~l~~-~~~~~~v~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~ 196 (275)
+|..|+..|..|.. ...+.+++++++.+.+.. ....++...+.+.+++.|++++.+ +|+.++.+++.
T Consensus 9 gG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i~~~~~~ 87 (409)
T 3h8l_A 9 GRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEKIDAKSSM 87 (409)
T ss_dssp SSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEEEETTTTE
T ss_pred CCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEEEeCCCCE
Confidence 67889999999884 236889999998875321 112234445666777789999987 89888765543
Q ss_pred ceEEcCCCc----EEeecEEEEcCCCCCCch
Q 023957 197 DTYLTSTGD----TINADCHFLCTGKPVGSD 223 (275)
Q Consensus 197 ~~v~~~~g~----~~~~d~vv~a~G~~~~~~ 223 (275)
+.+.+++ ++.+|.||+|+|..|+.+
T Consensus 88 --V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 88 --VYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp --EEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred --EEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 4444444 499999999999987654
No 289
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.23 E-value=0.00018 Score=60.86 Aligned_cols=91 Identities=18% Similarity=0.128 Sum_probs=64.9
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCc-----------CCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCc
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-----------IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD 197 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~ 197 (275)
+|..|+..|..|+....+.+++++++.+.+... ...++...+.+.+++.|++++.+ .++.++.+++
T Consensus 10 gG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~id~~~~-- 86 (430)
T 3h28_A 10 GGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESIDPDAN-- 86 (430)
T ss_dssp SSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEEETTTT--
T ss_pred ccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEEECCCC--
Confidence 778889999998854468899999998764210 01112222334456689999864 8888875543
Q ss_pred eEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 198 TYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 198 ~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
.+.+.+|+++.+|.+|+|+|..|+.
T Consensus 87 ~v~~~~g~~i~~d~liiAtG~~~~~ 111 (430)
T 3h28_A 87 TVTTQSGKKIEYDYLVIATGPKLVF 111 (430)
T ss_dssp EEEETTCCEEECSEEEECCCCEEEC
T ss_pred EEEECCCcEEECCEEEEcCCccccc
Confidence 6777888889999999999988654
No 290
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.23 E-value=0.00034 Score=61.03 Aligned_cols=88 Identities=17% Similarity=0.075 Sum_probs=65.3
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccC-----------------------------------c--CCcchHHHHH
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-----------------------------------F--IGPKAGDKTR 171 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~-----------------------------------~--~~~~~~~~~~ 171 (275)
+|..|+.+|..|.. .+.+++++++.+.+.. . ..+++.+.+.
T Consensus 17 aG~aGl~aA~~L~~--~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~ 94 (545)
T 3uox_A 17 AGVTGIYQAFLINQ--AGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEMLRYVN 94 (545)
T ss_dssp CSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHHHHHHH
T ss_pred ccHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHHHHHHH
Confidence 67788888888884 6789999998754310 0 0123455566
Q ss_pred HHHHhCCC--EEEcCceeeeecCCCC--CceEEcCCCcEEeecEEEEcCCC
Q 023957 172 DWLISKKV--DVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTGK 218 (275)
Q Consensus 172 ~~~~~~gv--~i~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G~ 218 (275)
+.+++.|+ .+..+++|++++.+++ .+.|.+.+|+++.||.||+|+|.
T Consensus 95 ~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 95 RAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred HHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 66777787 7899999999875443 55788889989999999999994
No 291
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.22 E-value=0.00057 Score=61.47 Aligned_cols=96 Identities=17% Similarity=0.106 Sum_probs=59.5
Q ss_pred CCeEEEEc--CChHHHHHHHHhh-cCCcEEEEcCCCCccccccccccccCCcccccccccccccccccEEEEe-eeeEee
Q 023957 13 NKRVVVIG--GGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT 88 (275)
Q Consensus 13 ~~~vvIIG--gG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 88 (275)
..+|+||| +|..|+.+|..|+ .|.+|+++++.+.+...... ... ...+..... ..+++++.. .+..+.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~------~~~-~~~l~~~l~-~~GV~i~~~~~V~~i~ 594 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNN------TFE-VNRIQRRLI-ENGVARVTDHAVVAVG 594 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGG------GTC-HHHHHHHHH-HTTCEEEESEEEEEEE
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccccc------chh-HHHHHHHHH-HCCCEEEcCcEEEEEE
Confidence 35799999 9999999999998 69999999988765311100 000 000000000 125555443 444555
Q ss_pred cCe--EE---ecCCeEEeCCEEEEccCCCCCCC
Q 023957 89 ENE--VL---TAEGRRVVYDYLVIATGHKDPVP 116 (275)
Q Consensus 89 ~~~--v~---~~~~~~~~~~~lilatG~~~~~~ 116 (275)
... +. +.++.++.+|.+|+|+|..|...
T Consensus 595 ~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~ 627 (690)
T 3k30_A 595 AGGVTVRDTYASIERELECDAVVMVTARLPREE 627 (690)
T ss_dssp TTEEEEEETTTCCEEEEECSEEEEESCEEECCH
T ss_pred CCeEEEEEccCCeEEEEECCEEEECCCCCCChH
Confidence 443 22 12456789999999999987753
No 292
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.21 E-value=0.00085 Score=54.17 Aligned_cols=89 Identities=18% Similarity=0.070 Sum_probs=63.4
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCc---c--------cCcC----CcchHHHHHHHHHhCCCEEEcCceeeeecCC
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSR---L--------LEFI----GPKAGDKTRDWLISKKVDVKLGERVNLDSVS 193 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~---~--------~~~~----~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 193 (275)
+|..|+..|..+. ..+.++.++++... . .+.+ ...+.+.+.+.+++.|++++. .++..++.+
T Consensus 24 ~G~aGl~aA~~l~--~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~ 100 (319)
T 3cty_A 24 AGAAGFSAAVYAA--RSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVRSIKKT 100 (319)
T ss_dssp CSHHHHHHHHHHH--HTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEE
T ss_pred cCHHHHHHHHHHH--hCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEe
Confidence 6777888888888 45788999987421 0 0111 123455667777888999988 688888765
Q ss_pred CCCceEEcCCCcEEeecEEEEcCCCCCC
Q 023957 194 EGSDTYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 194 ~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
++.+.+.+ ++.++.+|.+|+|+|..|.
T Consensus 101 ~~~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 101 QGGFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp TTEEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred CCEEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 55555665 5668999999999997664
No 293
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.18 E-value=0.0013 Score=52.80 Aligned_cols=92 Identities=16% Similarity=0.113 Sum_probs=57.7
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcc---c---Cc------C-CcchHHHHHHHHHhCC-CEEEcCceeeeecCCC
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRL---L---EF------I-GPKAGDKTRDWLISKK-VDVKLGERVNLDSVSE 194 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~---~---~~------~-~~~~~~~~~~~~~~~g-v~i~~~~~v~~i~~~~ 194 (275)
+|+.|+..|..++ ..+.++.++++...- . +. . .+++.+...+.+.+.+ +.+.....+.....++
T Consensus 14 aGpAGlsAA~~la--r~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (304)
T 4fk1_A 14 AGPAGLNASLVLG--RARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQST 91 (304)
T ss_dssp CSHHHHHHHHHHH--HTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTT
T ss_pred CCHHHHHHHHHHH--HCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCC
Confidence 5666777777776 458899999875321 0 00 1 1223334444444444 5555544444334444
Q ss_pred CCceEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 195 GSDTYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 195 ~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
+...+.+.+|+++.+|.||+|||.+|..
T Consensus 92 ~~~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 92 GLFEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp SCEEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred CcEEEEECCCCEEEeCEEEEccCCcccc
Confidence 5667888999999999999999987653
No 294
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.18 E-value=0.00046 Score=61.04 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK 44 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~ 44 (275)
..+|+|||||..|+.+|..|+ .|.+|+++++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 468999999999999999998 69999999987
No 295
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.14 E-value=0.0009 Score=55.97 Aligned_cols=92 Identities=18% Similarity=0.106 Sum_probs=63.4
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCc----------CCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCce
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF----------IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT 198 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~ 198 (275)
+|+.|+.+|..|+...++.+|+++++.+..... ...+....-.+.+.+.|++++.+ +|+.|+.+. ..
T Consensus 10 ~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~id~~~--~~ 86 (401)
T 3vrd_B 10 GGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGIDPDK--KL 86 (401)
T ss_dssp CSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEEETTT--TE
T ss_pred CcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEEEccC--cE
Confidence 677788888888766677899999987653211 11111111123355689999865 688887543 45
Q ss_pred EEcCCCcEEeecEEEEcCCCCCCch
Q 023957 199 YLTSTGDTINADCHFLCTGKPVGSD 223 (275)
Q Consensus 199 v~~~~g~~~~~d~vv~a~G~~~~~~ 223 (275)
+.+.+|+++.+|.+|+|+|..++..
T Consensus 87 v~~~~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 87 VKTAGGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp EEETTSCEEECSEEEECCCEEECGG
T ss_pred EEecccceeecceeeeccCCccccC
Confidence 7788999999999999999887543
No 296
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.08 E-value=0.00044 Score=59.74 Aligned_cols=91 Identities=22% Similarity=0.388 Sum_probs=54.5
Q ss_pred CeEEEEcCChHHHHHHHHhh---------------cCCcEEEEcCCCCcccccc-ccccccCCccccccccccccccccc
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ---------------FSADVTLIDPKEYFEITWA-SLRAMVEPSFGKRSVINHTDYLVNG 77 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~---------------~g~~v~vie~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (275)
..++|||||+.|+.+|.+|+ ...+|+|+|..+.+..... .+...... ...+ .++
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~--------~L~~--~GV 287 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQS--------HLEN--TSI 287 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHH--------HHHH--TTC
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHH--------HHHh--cce
Confidence 36999999999999998774 1368999999886531110 00000000 0000 145
Q ss_pred EEEE-eeeeEeecCeEE----ecCC----eEEeCCEEEEccCCCCC
Q 023957 78 RIVA-SPAINITENEVL----TAEG----RRVVYDYLVIATGHKDP 114 (275)
Q Consensus 78 ~~~~-~~~~~~~~~~v~----~~~~----~~~~~~~lilatG~~~~ 114 (275)
++.. ..+..++...+. ..++ .++++|.+|.|+|..|.
T Consensus 288 ~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 288 KVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp EEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred eeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 5542 344455555332 2344 36899999999998765
No 297
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.05 E-value=0.00064 Score=47.89 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
...+|+|+|.|..|...|..|. .|++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3468999999999999999998 6999999999764
No 298
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.92 E-value=0.001 Score=47.71 Aligned_cols=34 Identities=35% Similarity=0.577 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+|+|+|+|..|..+|..|+ .|++|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 468999999999999999997 6999999998753
No 299
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.92 E-value=0.0017 Score=55.36 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYF 47 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~~ 47 (275)
..++|+|||||..|+-+|..+. .|. +|+++++.+..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3578999999999999998886 577 59999998764
No 300
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.84 E-value=0.00097 Score=46.93 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+.+|+|+|+|..|..+|..|. .|++|+++|+++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 358999999999999999998 6999999998653
No 301
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.79 E-value=0.0012 Score=44.61 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=29.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g-~~v~vie~~~ 45 (275)
+++|+|+|+|..|..++..|. .| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999987 68 8999999865
No 302
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.77 E-value=0.0034 Score=54.21 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=30.0
Q ss_pred CCCeEEEEcCChHHHHHHHHhh---cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~---~g~~v~vie~~~~ 46 (275)
..++|+|||+|.+|.-++..|. .+.+|+++-|.+.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 3578999999999999999986 3789999998764
No 303
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.76 E-value=0.0015 Score=45.65 Aligned_cols=32 Identities=34% Similarity=0.472 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|+|||+|..|...|..|. .|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 58999999999999999997 699999999865
No 304
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.75 E-value=0.0046 Score=53.94 Aligned_cols=89 Identities=15% Similarity=0.113 Sum_probs=62.1
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCccc--------C-------------cCC----------------cchHHHHH
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------E-------------FIG----------------PKAGDKTR 171 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~--------~-------------~~~----------------~~~~~~~~ 171 (275)
+|..|+..|..|.+ .+.++.++++.+.+. + .+. +++.+.+.
T Consensus 24 aG~aGl~aA~~L~~--~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i~~yl~ 101 (542)
T 1w4x_A 24 AGFSGLYALYRLRE--LGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEILRYIN 101 (542)
T ss_dssp CSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHHHHHHH
T ss_pred ccHHHHHHHHHHHh--CCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHHHHHHH
Confidence 67778888888884 477899998765321 0 001 11233444
Q ss_pred HHHHhCC--CEEEcCceeeeecCCCC--CceEEcCCCcEEeecEEEEcCCCC
Q 023957 172 DWLISKK--VDVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 172 ~~~~~~g--v~i~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
...++.+ .+++.+++|.+++.+++ .+.|.+.+|+++.||.||+|+|..
T Consensus 102 ~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 102 FVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 4455555 67899999999876543 466888889889999999999964
No 305
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.69 E-value=0.0068 Score=53.61 Aligned_cols=55 Identities=16% Similarity=0.062 Sum_probs=42.4
Q ss_pred hHHHHHHHHHh-CCCEEEcCceeeeecCCCCCc-eEEcCCCcEEeecEEEEcCCCCCC
Q 023957 166 AGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPVG 221 (275)
Q Consensus 166 ~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~~ 221 (275)
+...+.+.+++ .|++++ +.+|+.+..+++.+ .|.+.+|..+.||.||+|+|..+.
T Consensus 126 ~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 126 YRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred HHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 44556677777 699995 57899987655544 577888888999999999998654
No 306
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.67 E-value=0.004 Score=55.82 Aligned_cols=27 Identities=26% Similarity=0.289 Sum_probs=22.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEE
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVT 39 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~ 39 (275)
..+|+|||||..|+.+|..|+ .|.+|+
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vt 521 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTS 521 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcc
Confidence 478999999999999999997 465544
No 307
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.65 E-value=0.0026 Score=45.40 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+|+|+|+|..|...|..|. .|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 357999999999999999997 699999999864
No 308
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.59 E-value=0.0015 Score=60.88 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=31.4
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcc
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~ 48 (275)
.+|+|||+|+.|+.+|..|+ .|.+|+|+|+.+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 68999999999999999998 599999999987653
No 309
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.50 E-value=0.0011 Score=59.90 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=30.3
Q ss_pred CCeEEEEc--CChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIG--GGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIG--gG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+|+||| ||..|+.+|..|+ .|.+|+++++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 46899999 9999999999998 699999999987
No 310
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.48 E-value=0.0033 Score=50.42 Aligned_cols=38 Identities=34% Similarity=0.433 Sum_probs=31.6
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
|...+++|.|||+|..|...|..|. .|++|+++|+++.
T Consensus 11 ~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3334568999999999999999987 6999999998753
No 311
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.46 E-value=0.0034 Score=51.04 Aligned_cols=38 Identities=26% Similarity=0.308 Sum_probs=32.1
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~ 46 (275)
|..++++|+|||+|..|.++|..|+ .|+ +|+++|.++.
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4444579999999999999999998 687 9999998764
No 312
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.37 E-value=0.0088 Score=48.69 Aligned_cols=93 Identities=17% Similarity=0.090 Sum_probs=61.6
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCc---------------------------C-----------CcchHHHH
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF---------------------------I-----------GPKAGDKT 170 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~---------------------------~-----------~~~~~~~~ 170 (275)
+|..|+..|..+....++.++.++++....... + ..++.+.+
T Consensus 87 gG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~~d~~~~L 166 (344)
T 3jsk_A 87 AGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHAALFTSTV 166 (344)
T ss_dssp CSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHH
T ss_pred ccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecHHHHHHHH
Confidence 777888888888854458899999876532100 0 11233556
Q ss_pred HHHHHh-CCCEEEcCceeeeecCCCC-------------------C-ceEEc------C--------CCcEEeecEEEEc
Q 023957 171 RDWLIS-KKVDVKLGERVNLDSVSEG-------------------S-DTYLT------S--------TGDTINADCHFLC 215 (275)
Q Consensus 171 ~~~~~~-~gv~i~~~~~v~~i~~~~~-------------------~-~~v~~------~--------~g~~~~~d~vv~a 215 (275)
.+.+++ .|++++.++.+.++..+++ . ..+.. . +..++.++.||.|
T Consensus 167 ~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~A 246 (344)
T 3jsk_A 167 LSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIIST 246 (344)
T ss_dssp HHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEEC
T ss_pred HHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEEC
Confidence 666666 5999999999988865441 1 12222 1 2347999999999
Q ss_pred CCCCCC
Q 023957 216 TGKPVG 221 (275)
Q Consensus 216 ~G~~~~ 221 (275)
+|....
T Consensus 247 TG~~s~ 252 (344)
T 3jsk_A 247 TGHDGP 252 (344)
T ss_dssp CCSSSS
T ss_pred CCCCch
Confidence 997653
No 313
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.34 E-value=0.0038 Score=52.46 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhhcCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~~g~~v~vie~~~~ 46 (275)
..++|.|||.|..|+..|..|++|++|+++|+++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQNHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHcCCeEEEEecCHH
Confidence 34689999999999999998878999999998753
No 314
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.33 E-value=0.0036 Score=53.27 Aligned_cols=34 Identities=38% Similarity=0.475 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..++|+|||.|.+|+++|..|+ +|++|++.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3579999999999999999887 799999999865
No 315
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.31 E-value=0.0035 Score=43.91 Aligned_cols=33 Identities=36% Similarity=0.523 Sum_probs=29.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+.+|+|+|+|..|..+|..|. .|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357999999999999999997 699999999864
No 316
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.28 E-value=0.017 Score=50.90 Aligned_cols=56 Identities=14% Similarity=0.053 Sum_probs=43.0
Q ss_pred hHHHHHHHHHh-CCCEEEcCceeeeecCCCCCc-eEEcCCCcEEeecEEEEcCCCCCCc
Q 023957 166 AGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPVGS 222 (275)
Q Consensus 166 ~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~~~ 222 (275)
+.+.+.+.+++ .|++++ +.+|+++..+++.+ .|.+.+|..+.||.||+|+|..++.
T Consensus 125 ~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 125 YREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp HHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred HHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 34556677777 599995 67899987655554 4788889899999999999986543
No 317
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.24 E-value=0.0053 Score=45.21 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c-CCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~-g~~v~vie~~~~ 46 (275)
..+|+|+|+|..|..+|..|. . |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 458999999999999999997 7 999999998763
No 318
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.16 E-value=0.0063 Score=48.30 Aligned_cols=34 Identities=32% Similarity=0.308 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||+|..|...|..|+ .|++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 468999999999999999987 7999999998764
No 319
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.13 E-value=0.0032 Score=47.86 Aligned_cols=32 Identities=25% Similarity=0.449 Sum_probs=29.3
Q ss_pred eEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+|+|+|+|..|...|..|. .|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 6999999999999999997 7999999998763
No 320
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.13 E-value=0.0071 Score=46.01 Aligned_cols=35 Identities=29% Similarity=0.482 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+.|+|||||..|...|..|. .|.+|+|++++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~ 65 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVS 65 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 4579999999999999999887 6999999997643
No 321
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.11 E-value=0.0066 Score=49.86 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=31.4
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
|+...++|.|||+|..|.+.|..|. .|++|+++++++.
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4444578999999999999999998 6999999998753
No 322
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.10 E-value=0.0036 Score=53.08 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|+|||.|.+|+++|..|+ +|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 368999999999999998887 7999999998764
No 323
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.07 E-value=0.0033 Score=53.62 Aligned_cols=34 Identities=24% Similarity=0.528 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|+|+|+|-.|...|..|. .|++|++||+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 468999999999999999997 6999999998864
No 324
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.07 E-value=0.0066 Score=52.26 Aligned_cols=90 Identities=18% Similarity=0.082 Sum_probs=61.3
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCcccCc----------CCcchH---HHHHHHHHhCCCEEEcCceeeeecCCCC
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF----------IGPKAG---DKTRDWLISKKVDVKLGERVNLDSVSEG 195 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~~~----------~~~~~~---~~~~~~~~~~gv~i~~~~~v~~i~~~~~ 195 (275)
+|..|+..|..+.. . .+++++++.+.+... +..... ..+.+.+ +.|++++.++.+..+..+++
T Consensus 116 gG~aGl~aA~~L~~--~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~ 191 (493)
T 1y56_A 116 GGPAGIGAALELQQ--Y-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGVFDKGE 191 (493)
T ss_dssp CSHHHHHHHHHHTT--T-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCCEECSS
T ss_pred ccHHHHHHHHHHHh--c-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCc
Confidence 88899999999984 3 899999987654210 111111 2222223 46999999999998876655
Q ss_pred CceEEc-CCCc--EEeecEEEEcCCCCCCc
Q 023957 196 SDTYLT-STGD--TINADCHFLCTGKPVGS 222 (275)
Q Consensus 196 ~~~v~~-~~g~--~~~~d~vv~a~G~~~~~ 222 (275)
.+.+.. .+++ .+.+|.+|+|+|..|..
T Consensus 192 ~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 192 YFLVPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp SEEEEEEETTEEEEEEESCEEECCCEEECC
T ss_pred EEEEEEecCCeEEEEECCEEEECCCCCccC
Confidence 544433 4454 68999999999987643
No 325
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.04 E-value=0.0074 Score=50.13 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+|+|||+|.+|+.+|..|+ .|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 478999999999999999998 6999999998874
No 326
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.94 E-value=0.0092 Score=48.20 Aligned_cols=34 Identities=32% Similarity=0.429 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~ 46 (275)
+++|.|||+|..|.+.|..|. .|+ +|+++|+++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 468999999999999999987 687 9999998763
No 327
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.90 E-value=0.0085 Score=48.46 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|+|||+|-.|.+.|..|+ .|++|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 58999999999999999998 699999999875
No 328
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.88 E-value=0.0086 Score=48.58 Aligned_cols=35 Identities=26% Similarity=0.179 Sum_probs=29.5
Q ss_pred CCCeEEEEcCChHHHH-HHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSL-VAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~-aA~~L~-~g~~v~vie~~~~ 46 (275)
.+++|.|||.|.+|++ +|..|. +|++|++.|++..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 3578999999999997 666776 7999999998764
No 329
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.87 E-value=0.008 Score=49.49 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+|+|||+|.+|+.+|..|+ .|.+|+++|+++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 478999999999999999998 6999999998763
No 330
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.84 E-value=0.0092 Score=48.19 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=28.5
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
|+..+.+|+|||+|..|.++|+.|. .+. +++++|.+.
T Consensus 3 m~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 3 MVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp ----CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3334578999999999999999997 565 899999865
No 331
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.83 E-value=0.01 Score=47.74 Aligned_cols=35 Identities=40% Similarity=0.481 Sum_probs=30.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
....+|.|||+|..|.++|+.|. .|+ +++++|.++
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 34578999999999999999987 688 999999873
No 332
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.79 E-value=0.0057 Score=48.08 Aligned_cols=34 Identities=35% Similarity=0.583 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+.|+|||||-.|...|..|. .|++|+|++++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3578999999999999999887 699999999754
No 333
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.77 E-value=0.0084 Score=48.29 Aligned_cols=33 Identities=24% Similarity=0.287 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.+|.|||+|..|...|..++ .|++|+++|.++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 58999999999999998887 7999999998764
No 334
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.76 E-value=0.01 Score=47.42 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||.|..|...|..|. .|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 468999999999999999997 6999999998774
No 335
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.74 E-value=0.013 Score=47.34 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=29.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~ 46 (275)
+++|.|||+|..|..+|..|. .|+ +|+++|.++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 468999999999999999987 677 8999998753
No 336
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.69 E-value=0.0094 Score=48.00 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|+|||+|-.|.+.|..|. .|++|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 58999999999999999998 699999999875
No 337
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.66 E-value=0.013 Score=47.41 Aligned_cols=36 Identities=28% Similarity=0.418 Sum_probs=30.3
Q ss_pred cCCCCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
+....+|.|||+|..|.++|+.|. .|+ +++++|.+.
T Consensus 2 ~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 2 NKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 344578999999999999999987 565 899999854
No 338
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=95.64 E-value=0.0097 Score=50.63 Aligned_cols=42 Identities=24% Similarity=0.330 Sum_probs=37.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCccccccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS 53 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~~ 53 (275)
..+||+|||||++||+||+.|+ .|++|+|+|+++.+|+....
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 4589999999999999999998 69999999999999876443
No 339
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.62 E-value=0.013 Score=47.06 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 34578999999999999999997 6999999998764
No 340
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.60 E-value=0.013 Score=47.34 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
+++|+|||+|..|.+.|..|. .|+ +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 358999999999999999997 687 999999875
No 341
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.58 E-value=0.013 Score=47.14 Aligned_cols=32 Identities=34% Similarity=0.465 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|.|||+|..|...|..|. .|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 48999999999999999997 699999999865
No 342
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.54 E-value=0.0096 Score=41.92 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+|+|||+|..|...|..|. .|.+|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 578999999999999999987 688899999865
No 343
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.49 E-value=0.015 Score=47.92 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
|++|+|+|||..|..+|+.++ .|++|+++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 478999999999999999998 6999999998764
No 344
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.49 E-value=0.009 Score=48.27 Aligned_cols=36 Identities=22% Similarity=0.206 Sum_probs=31.3
Q ss_pred cCCCCeEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCC
Q 023957 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKE 45 (275)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~aA~~L~-~g-~~v~vie~~~ 45 (275)
++++++|.|||.|..|...|..|. .| ++|+++++++
T Consensus 21 ~~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 21 QSMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp HTSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 344578999999999999999997 69 9999999875
No 345
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.39 E-value=0.02 Score=46.48 Aligned_cols=33 Identities=36% Similarity=0.444 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~ 46 (275)
++|.|||+|..|.++|..|+ .|+ +|+++|.++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 58999999999999999887 687 9999998764
No 346
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.38 E-value=0.014 Score=47.18 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||+|..|.+.|..|. .|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 368999999999999999987 7999999998764
No 347
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.38 E-value=0.021 Score=43.09 Aligned_cols=34 Identities=18% Similarity=0.394 Sum_probs=30.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||+|..|.+.|..|. .|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 468999999999999999997 6999999998764
No 348
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.37 E-value=0.021 Score=45.98 Aligned_cols=33 Identities=27% Similarity=0.334 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
.++|.|||.|..|.+.|..|+ .|+ +|+++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 368999999999999999997 688 999999876
No 349
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.37 E-value=0.018 Score=45.58 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=29.1
Q ss_pred eEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+|.|||+|..|.+.|..|. .|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 6999999999999999997 6999999998764
No 350
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.36 E-value=0.017 Score=48.26 Aligned_cols=34 Identities=32% Similarity=0.430 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+|+|||+|.+|+.+|..|+ .|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 468999999999999999987 6999999998764
No 351
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.31 E-value=0.021 Score=47.45 Aligned_cols=35 Identities=31% Similarity=0.363 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
...+|+|+|+|.+|+.+|..++ .|.+|+++|+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3578999999999999999998 6999999998764
No 352
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.31 E-value=0.018 Score=47.18 Aligned_cols=32 Identities=28% Similarity=0.248 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|.|||+|..|...|..|. .|++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 58999999999999999997 699999999865
No 353
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.30 E-value=0.018 Score=48.89 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|.|||.|..|+..|..|+ .|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 58999999999999999998 699999999875
No 354
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.30 E-value=0.012 Score=47.26 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=28.5
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-c-----C-CcEEEEcC
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-F-----S-ADVTLIDP 43 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~-----g-~~v~vie~ 43 (275)
|++++++|.|||+|..|.+.|..|. . | ++|+++++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3334468999999999999999987 6 8 99999998
No 355
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.25 E-value=0.013 Score=46.66 Aligned_cols=32 Identities=34% Similarity=0.452 Sum_probs=29.3
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|+|||+|-.|.+.|..|. .|++|++++|++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 58999999999999999998 699999999874
No 356
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.21 E-value=0.023 Score=45.75 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||+|..|...|..|. .|++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 468999999999999999987 6999999998754
No 357
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.21 E-value=0.023 Score=45.65 Aligned_cols=32 Identities=38% Similarity=0.566 Sum_probs=28.4
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
++|.|||+|..|...|..|. .|+ +++++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 58999999999999999987 575 899999865
No 358
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.18 E-value=0.019 Score=47.29 Aligned_cols=37 Identities=30% Similarity=0.461 Sum_probs=29.7
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhhcCCcEEEEcCCC
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~~g~~v~vie~~~ 45 (275)
|...+++|+|+|+|..|-.+|..|++.++|++.+++.
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~ 48 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNN 48 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCH
Confidence 4445678999999999999999999888999988754
No 359
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.16 E-value=0.021 Score=48.73 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c-CC-cEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F-SA-DVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~-g~-~v~vie~~~~ 46 (275)
.++|.|||+|..|+..|..|+ . |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 468999999999999999997 7 99 9999998876
No 360
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.15 E-value=0.021 Score=48.87 Aligned_cols=33 Identities=24% Similarity=0.452 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
.++|.|||.|..|+..|..|+ .|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 368999999999999999998 699999999864
No 361
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.15 E-value=0.022 Score=45.68 Aligned_cols=32 Identities=34% Similarity=0.582 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHhhcCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~~g~~v~vie~~~ 45 (275)
++|+|||+|-.|.+.|..|..|++|++++|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 58999999999999998888888999999875
No 362
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=95.13 E-value=0.017 Score=49.38 Aligned_cols=40 Identities=25% Similarity=0.424 Sum_probs=34.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCccccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITW 51 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~~~~~~ 51 (275)
..+||+|||||++|+++|+.|+ .|+ +|+|+|+++.+|+.+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCce
Confidence 3579999999999999999998 688 899999999887654
No 363
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.09 E-value=0.014 Score=49.68 Aligned_cols=83 Identities=12% Similarity=-0.019 Sum_probs=58.4
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCccc--------CcC--CcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCce
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------EFI--GPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT 198 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~ 198 (275)
+|+.|+.+|..+....++.+++++++.+.+. +.+ ..++...+.+.+++.|++++.++.+. . .
T Consensus 14 ~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~------~--~ 85 (460)
T 1cjc_A 14 SGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG------R--D 85 (460)
T ss_dssp CSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT------T--T
T ss_pred cCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe------e--E
Confidence 6778889998888644458999999887543 111 12455666777788899999987762 1 1
Q ss_pred EEcCCCcEEeecEEEEcCCCCC
Q 023957 199 YLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 199 v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
+.+.+. .+.+|.||+|+|..|
T Consensus 86 V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 86 VTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp BCHHHH-HHHSSEEEECCCCCE
T ss_pred EEeccc-eEEcCEEEEecCcCC
Confidence 333333 378999999999874
No 364
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.07 E-value=0.025 Score=45.97 Aligned_cols=31 Identities=16% Similarity=0.476 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK 44 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~ 44 (275)
++|+|||+|-.|.+.|..|. .|++|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999998 69999999985
No 365
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.04 E-value=0.024 Score=45.46 Aligned_cols=32 Identities=34% Similarity=0.504 Sum_probs=28.6
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
++|+|||+|..|.+.|..|. .|+ +|+++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 37999999999999999987 677 899999875
No 366
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.04 E-value=0.026 Score=44.89 Aligned_cols=35 Identities=31% Similarity=0.450 Sum_probs=30.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhhcCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~~g~~v~vie~~~~ 46 (275)
.+++|.|||+|..|...|..|+.|++|+++|+++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIASKHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHHcCCEEEEEECCHH
Confidence 46899999999999999977668899999998764
No 367
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.03 E-value=0.028 Score=47.37 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+.+.+|.|||.|..||.+|..|+ .|++|+.+|-++
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 34579999999999999999998 799999999764
No 368
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.98 E-value=0.027 Score=45.05 Aligned_cols=34 Identities=21% Similarity=0.078 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 468999999999999999997 6999999998753
No 369
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.96 E-value=0.019 Score=48.08 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+|+|||.|..|...|..|. .|++|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 357999999999999999998 6999999998864
No 370
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.96 E-value=0.027 Score=48.19 Aligned_cols=34 Identities=29% Similarity=0.352 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||+|..|...|..|. .|++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 458999999999999999987 6999999998764
No 371
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.95 E-value=0.033 Score=44.13 Aligned_cols=33 Identities=18% Similarity=0.416 Sum_probs=29.7
Q ss_pred CCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+++|.|||+ |..|.+.|..|. .|++|+++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 468999999 999999999997 699999999865
No 372
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.95 E-value=0.024 Score=46.69 Aligned_cols=33 Identities=36% Similarity=0.581 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+|+|+|+|.+|+.++..|+ .|.+|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 368999999999999999998 699999999865
No 373
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.94 E-value=0.032 Score=47.25 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||+|..|...|..|+ .|++|+++|+++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 368999999999999999987 6999999999875
No 374
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.84 E-value=0.029 Score=44.28 Aligned_cols=34 Identities=9% Similarity=0.151 Sum_probs=30.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+++|+|.|+|..|...+..|. +|++|+++.|++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 368999999999999999987 7999999998653
No 375
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.83 E-value=0.026 Score=45.38 Aligned_cols=34 Identities=29% Similarity=0.356 Sum_probs=29.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
.+++|.|||.|..|...|..|. .|+ +|+++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 3578999999999999999997 699 999999863
No 376
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.82 E-value=0.029 Score=45.07 Aligned_cols=32 Identities=31% Similarity=0.451 Sum_probs=28.5
Q ss_pred eEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCC
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEY 46 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~~ 46 (275)
+|+|||+|..|.+.|..|+ . +++|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 7999999999999999987 3 789999999764
No 377
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.79 E-value=0.026 Score=42.82 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=29.7
Q ss_pred CCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+++|+|.|| |..|...+..|. +|++|+++.|++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 468999996 999999999987 7999999998753
No 378
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=94.76 E-value=0.032 Score=44.64 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=28.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~~ 46 (275)
+.+|.|||+|..|..+|+.|. +|+ +++|+|.++.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 478999999999999998887 677 8999998763
No 379
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.76 E-value=0.03 Score=46.14 Aligned_cols=33 Identities=36% Similarity=0.510 Sum_probs=29.5
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
.-+|+|+|||.||+.+|..|. .|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 468999999999999998886 688 899999974
No 380
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.75 E-value=0.037 Score=47.19 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||+|..|...|..|. .|++|+++|+++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 468999999999999999997 6999999998763
No 381
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.64 E-value=0.033 Score=45.76 Aligned_cols=33 Identities=36% Similarity=0.470 Sum_probs=29.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPK 44 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~ 44 (275)
...+|+|+|||-+|..+|..|. .|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3579999999999999999887 687 79999997
No 382
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.64 E-value=0.014 Score=49.72 Aligned_cols=82 Identities=9% Similarity=-0.051 Sum_probs=57.5
Q ss_pred CCcchhhHHHHHhh-hCC----CCEEEEEeCCCcccC----------cCCcchHHHHHHHHHhCCCEEEcCceeeeecCC
Q 023957 129 GGPTGVELAGEIAV-DFP----EKKVTLVHKGSRLLE----------FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS 193 (275)
Q Consensus 129 ~g~~~~~~a~~l~~-~~~----~~~v~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 193 (275)
+|+.|+..|..+.. ..+ +.+++++++.+.+.. ....++...+.+.+++.|++++.+..+ .
T Consensus 11 ~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v~v---~-- 85 (456)
T 1lqt_A 11 SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVV---G-- 85 (456)
T ss_dssp CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESCCB---T--
T ss_pred cCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeEEE---C--
Confidence 67788888888875 333 789999998865421 112346666777788889999988553 1
Q ss_pred CCCceEEcCCCcEEeecEEEEcCCCC
Q 023957 194 EGSDTYLTSTGDTINADCHFLCTGKP 219 (275)
Q Consensus 194 ~~~~~v~~~~g~~~~~d~vv~a~G~~ 219 (275)
. .+.+.++ .+.+|.||+|+|..
T Consensus 86 -~--~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 86 -E--HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp -T--TBCHHHH-HHHSSEEEECCCCC
T ss_pred -C--EEEECCC-eEeCCEEEEeeCCC
Confidence 1 2444445 37899999999986
No 383
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.62 E-value=0.036 Score=45.77 Aligned_cols=33 Identities=36% Similarity=0.588 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+|+|+|+|..|+.+|..|+ .|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 478999999999999999998 699999999865
No 384
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.62 E-value=0.044 Score=44.25 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~ 46 (275)
+.+|.|||+|..|.++|..|. .++ +++++|.++.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 468999999999999999987 577 9999998764
No 385
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.56 E-value=0.03 Score=44.43 Aligned_cols=33 Identities=24% Similarity=0.275 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 47999999999999999997 6999999998764
No 386
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.52 E-value=0.039 Score=43.78 Aligned_cols=33 Identities=30% Similarity=0.392 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 57999999999999999997 6999999998764
No 387
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.52 E-value=0.022 Score=43.35 Aligned_cols=34 Identities=18% Similarity=0.230 Sum_probs=29.5
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEE-EcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTL-IDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~v-ie~~~~ 46 (275)
+++|.|||+|..|.+.|..|. .|++|++ +++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 368999999999999999997 6999998 887653
No 388
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.52 E-value=0.023 Score=43.53 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=28.9
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
...+|+|+|+|..|...|..|. .|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3468999999999999999997 688 999998764
No 389
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.50 E-value=0.016 Score=54.59 Aligned_cols=84 Identities=13% Similarity=0.085 Sum_probs=59.4
Q ss_pred CCcchhhHHHHHhhhCCCC-EEEEEeCCCcccC---------cCCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCce
Q 023957 129 GGPTGVELAGEIAVDFPEK-KVTLVHKGSRLLE---------FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT 198 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~-~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~ 198 (275)
+|+.|+..|..|+. .|. +++++++.+.+.. ....+..+...+.+++.|++++.++.+.. + .
T Consensus 195 gGpAGl~aA~~L~~--~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-----~--~ 265 (1025)
T 1gte_A 195 AGPASISCASFLAR--LGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE-----N--E 265 (1025)
T ss_dssp CSHHHHHHHHHHHH--TTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST-----T--S
T ss_pred ccHHHHHHHHHHHh--cCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc-----c--e
Confidence 78889999999984 466 7999998765421 12234455556778889999999987742 1 2
Q ss_pred EEcCCCcEEeecEEEEcCCC-CCC
Q 023957 199 YLTSTGDTINADCHFLCTGK-PVG 221 (275)
Q Consensus 199 v~~~~g~~~~~d~vv~a~G~-~~~ 221 (275)
+.+.+++++.+|.||+|+|. .|.
T Consensus 266 v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 266 ITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp BCHHHHHHTTCCEEEECCCCCEEC
T ss_pred EEhhhcCccCCCEEEEecCCCCCC
Confidence 33444555789999999998 464
No 390
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.50 E-value=0.038 Score=46.19 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=28.4
Q ss_pred eEEEEcCChHHHHHHHHhhcCCcEEEEcCCC
Q 023957 15 RVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~~g~~v~vie~~~ 45 (275)
+|.|||.|..|+..|..|.+|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 6999999999999999987799999999864
No 391
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.48 E-value=0.04 Score=45.58 Aligned_cols=33 Identities=39% Similarity=0.490 Sum_probs=29.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+|+|||+|..|+.+|..|+ .|.+|+++|+++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 578999999999999999998 699999999865
No 392
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.48 E-value=0.037 Score=47.26 Aligned_cols=32 Identities=28% Similarity=0.536 Sum_probs=28.8
Q ss_pred CeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~ 45 (275)
++|.|||.|..|+..|..|+ . |++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 58999999999999999987 5 79999999864
No 393
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.47 E-value=0.043 Score=45.05 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 468999999999999999997 6999999998753
No 394
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.46 E-value=0.041 Score=41.64 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=28.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+++|.|||+|..|...|..|. .|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357999999999999999987 689999999864
No 395
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.42 E-value=0.044 Score=42.37 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..++|.|||+|..|.+.|..|. .|++|+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 3578999999999999999997 6999999998753
No 396
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.40 E-value=0.043 Score=42.57 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
..+|+|||+|-.|..+|..|. .|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 368999999999999999998 586 899999876
No 397
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.34 E-value=0.057 Score=42.32 Aligned_cols=34 Identities=15% Similarity=0.325 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++++|||+|-+|-++|+.|. .|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999999999999998 6899999998764
No 398
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.32 E-value=0.038 Score=46.71 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=28.4
Q ss_pred eEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+|.|||+|..|+..|..|+ .|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7999999999999999997 699999999864
No 399
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.32 E-value=0.054 Score=42.72 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++|+|.|+|..|...+..|. +|++|+++.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 57999999999999999987 7999999998754
No 400
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.31 E-value=0.057 Score=43.55 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~ 46 (275)
+.+|.|||+|..|.++|..|. .++ +++++|.++.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 368999999999999999887 566 9999998764
No 401
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.29 E-value=0.043 Score=43.81 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 358999999999999999997 6999999998753
No 402
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.26 E-value=0.045 Score=43.93 Aligned_cols=32 Identities=34% Similarity=0.531 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHhh-cC--CcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FS--ADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g--~~v~vie~~~ 45 (275)
++|.|||+|..|.+.|..|. .| .+|+++|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999997 57 6899999865
No 403
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.25 E-value=0.048 Score=46.14 Aligned_cols=33 Identities=24% Similarity=0.483 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
-++.|||.|..|+..|..|+ .|++|+++|+++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 58999999999999999998 6999999998765
No 404
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.22 E-value=0.047 Score=43.54 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+++|.|||+|..|...|..|. .|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 468999999999999999987 699999999865
No 405
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.22 E-value=0.056 Score=42.48 Aligned_cols=33 Identities=27% Similarity=0.360 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
.+.++|+|+|-+|.++|..|. .|.+|++++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 468999999999999999997 689999998864
No 406
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.22 E-value=0.042 Score=45.22 Aligned_cols=31 Identities=29% Similarity=0.421 Sum_probs=28.6
Q ss_pred eEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+|.|||+|..|.+.|..|. .|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 8999999999999999997 689999999875
No 407
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.19 E-value=0.047 Score=41.70 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=30.2
Q ss_pred CCCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..++|+|.|| |..|..++..|. +|++|+++.|++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3578999998 999999999987 7999999998753
No 408
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.15 E-value=0.063 Score=43.01 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 468999999999999999997 6999999998763
No 409
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.15 E-value=0.053 Score=44.02 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+|.|||+|..|.+.|..|. .|++|+++++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 468999999999999999997 699999999864
No 410
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.14 E-value=0.069 Score=43.14 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=29.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
...+|.|||+|..|.++|+.|. .|+ +++++|.+.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 3478999999999999999987 566 899999855
No 411
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.08 E-value=0.074 Score=42.42 Aligned_cols=34 Identities=24% Similarity=0.550 Sum_probs=30.0
Q ss_pred CCeEEEEc-CChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIG-GGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIG-gG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+|.||| .|..|.+.|..|+ .|++|+++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 35899999 9999999999998 6999999998753
No 412
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.07 E-value=0.056 Score=43.62 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 468999999999999999997 6999999998753
No 413
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.06 E-value=0.05 Score=43.89 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
++|.|||+|..|.+.|..|. .|+ +|+++|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 37999999999999999987 688 999999875
No 414
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.06 E-value=0.055 Score=43.71 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=29.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cC----CcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FS----ADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g----~~v~vie~~~~ 46 (275)
+++|.|||+|..|.+.|..|. .| ++|+++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 357999999999999999987 57 79999998763
No 415
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.05 E-value=0.053 Score=46.47 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=28.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~--g~~v~vie~~~ 45 (275)
+++|.|||.|..|+..|..|+ . |++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 358999999999999999997 4 78999999754
No 416
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=94.02 E-value=0.068 Score=44.19 Aligned_cols=36 Identities=33% Similarity=0.553 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
...++|+|||+|..|..++..++ .|++|+++|..+.
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 34578999999999999999998 6999999997654
No 417
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.97 E-value=0.058 Score=43.47 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=28.0
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
.++|+|||+|-.|.+.|..|+ .|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999998 69999999 654
No 418
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.96 E-value=0.053 Score=43.89 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=27.3
Q ss_pred eEEEEcCChHHHHHHHHhh-cCCcEEEEcC
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDP 43 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~g~~v~vie~ 43 (275)
+|.|||+|..|.+.|..|. .|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 6999999999999999997 6999999998
No 419
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.96 E-value=0.046 Score=46.49 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
.++|+|||||..|...|..|. .|.+|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 578999999999999999887 699999999864
No 420
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.93 E-value=0.046 Score=44.35 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=27.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHhh-cCC-------cEEEEcCC
Q 023957 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSA-------DVTLIDPK 44 (275)
Q Consensus 12 ~~~~vvIIGg-G~aGl~aA~~L~-~g~-------~v~vie~~ 44 (275)
.+++|+|||| |..|.+.+..|. .+. ++.++|..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 3468999998 999999999986 454 79999976
No 421
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.92 E-value=0.023 Score=43.45 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=28.9
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK 44 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~ 44 (275)
.++|.|||.|..|.+.|..|+ .|++|+++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 458999999999999999998 69999999884
No 422
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.90 E-value=0.09 Score=46.55 Aligned_cols=41 Identities=29% Similarity=0.562 Sum_probs=37.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA 52 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~~~ 52 (275)
+.|||+|||+|..|..+|..|+ .|.+|++|||++++|+.|.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 3699999999999999999998 6999999999999997654
No 423
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.86 E-value=0.06 Score=42.86 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=28.2
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
++|.|||+|..|.++|+.|. .++ +++++|.++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 37999999999999999987 566 899999866
No 424
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.84 E-value=0.073 Score=43.00 Aligned_cols=33 Identities=21% Similarity=0.468 Sum_probs=28.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
..+|+|||+|..|.++|+.|. .+. +++++|.+.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 468999999999999999987 565 899999854
No 425
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=93.84 E-value=0.05 Score=46.41 Aligned_cols=40 Identities=28% Similarity=0.463 Sum_probs=34.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcccc
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT 50 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~~~~~ 50 (275)
..++||+|||||++||+||+.|+ .|++|+|+|+++.+|+.
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 34689999999999999999998 69999999999988754
No 426
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.82 E-value=0.064 Score=43.10 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~~ 46 (275)
++|.|||+|..|.++|+.|. .+. +++++|.++.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 37999999999999999987 565 8999998763
No 427
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.81 E-value=0.058 Score=43.80 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=29.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+.|+|.|| |..|..++..|. +|++|+++++.+.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 4578999999 999999999987 7999999998763
No 428
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.78 E-value=0.075 Score=42.38 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=29.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
.++|+|||+|.+|.++|..|. .|. +|+|++|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 468999999999999999997 687 899999864
No 429
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.77 E-value=0.073 Score=42.86 Aligned_cols=33 Identities=39% Similarity=0.590 Sum_probs=28.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
..+|+|||+|..|.+.|+.|+ .+. +++++|.++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 468999999999999999887 453 799999875
No 430
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.77 E-value=0.099 Score=43.77 Aligned_cols=40 Identities=25% Similarity=0.388 Sum_probs=35.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCCCccccc
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKEYFEITW 51 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g-~~v~vie~~~~~~~~~ 51 (275)
.++||+|||||++||+||++|+ .| ++|+|+|+++.+|+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 4589999999999999999998 68 8999999999887543
No 431
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.74 E-value=0.069 Score=43.04 Aligned_cols=34 Identities=24% Similarity=0.471 Sum_probs=28.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
++.+|+|||+|..|.++|+.|. .+. +++++|.+.
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3468999999999999999987 454 799999854
No 432
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.72 E-value=0.055 Score=44.72 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHhh-cC-------CcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FS-------ADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g-------~~v~vie~~~~ 46 (275)
++|.|||+|..|.+.|..|. .| ++|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 57999999999999999987 57 99999998765
No 433
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.72 E-value=0.076 Score=45.20 Aligned_cols=35 Identities=31% Similarity=0.557 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhhcCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~~g~~v~vie~~~~ 46 (275)
..++|+|+|||-.|..+|..|...++|.+||++..
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~ 268 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQ 268 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHH
T ss_pred cccEEEEEcchHHHHHHHHHhhhcCceEEEecCHH
Confidence 34789999999999999999998899999998764
No 434
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.69 E-value=0.07 Score=40.04 Aligned_cols=31 Identities=26% Similarity=0.432 Sum_probs=28.0
Q ss_pred eEEEEc-CChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 15 RVVVIG-GGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 15 ~vvIIG-gG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+|+||| +|..|...|..|. .|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 9999999999987 699999999864
No 435
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.68 E-value=0.079 Score=42.68 Aligned_cols=33 Identities=39% Similarity=0.537 Sum_probs=28.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cC--CcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FS--ADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g--~~v~vie~~~ 45 (275)
+.+|+|||+|..|.++|+.|. .+ .++.++|.++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 469999999999999999887 45 4799999764
No 436
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.67 E-value=0.074 Score=39.94 Aligned_cols=31 Identities=29% Similarity=0.417 Sum_probs=28.1
Q ss_pred eEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 15 RVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 15 ~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+|+|+|| |..|..++..|. +|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 999999999987 799999999875
No 437
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.66 E-value=0.08 Score=41.74 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=28.5
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
++|.|||+|..|.+.|..|. .|+ +|+++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 47999999999999999997 587 899999865
No 438
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.65 E-value=0.081 Score=43.93 Aligned_cols=35 Identities=26% Similarity=0.573 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..++|+|||+|..|..+|..++ .|++|+++|..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 4578999999999999999998 6999999987653
No 439
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.63 E-value=0.076 Score=42.41 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..++|.|||+|..|..+|..|+ .|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3578999999999999999998 699999999865
No 440
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.60 E-value=0.072 Score=42.27 Aligned_cols=33 Identities=36% Similarity=0.509 Sum_probs=29.5
Q ss_pred CeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++|+|.|| |+.|...+..|. +|++|+++.|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 47999999 999999999987 7999999988764
No 441
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.57 E-value=0.078 Score=42.18 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=30.2
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..++|.|||.|..|..+|..|+ .|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3578999999999999999998 699999999864
No 442
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.56 E-value=0.069 Score=42.49 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=29.3
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++|.|||+|..|...|..|. .|++|+++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 48999999999999999987 6899999998653
No 443
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.56 E-value=0.094 Score=42.44 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=29.1
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
...+|.|||+|..|.++|+.|. +++ +++++|.+.
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 4579999999999999999887 565 899999864
No 444
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=93.54 E-value=0.1 Score=43.84 Aligned_cols=35 Identities=23% Similarity=0.434 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..++|+|+|+|..|..++..++ .|++|+++|..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 3578999999999999999998 6999999997654
No 445
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=93.53 E-value=0.056 Score=41.34 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=29.2
Q ss_pred CCCeEEEEcC-ChHHHHHHHHhh-cC-CcEEEEcCCC
Q 023957 12 KNKRVVVIGG-GVAGSLVAKSLQ-FS-ADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGg-G~aGl~aA~~L~-~g-~~v~vie~~~ 45 (275)
+++.|+|.|| |..|..++..|. .| ++|+++.|++
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 3578999995 999999999987 68 8999998865
No 446
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=93.49 E-value=0.065 Score=44.76 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+.|+|+|.|..|..+|..|+ .|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4579999999999999999998 699999999865
No 447
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.48 E-value=0.099 Score=42.54 Aligned_cols=33 Identities=24% Similarity=0.568 Sum_probs=28.0
Q ss_pred CCeEEEEcC-ChHHHHHHHHhh-cC--CcEEEEcCCC
Q 023957 13 NKRVVVIGG-GVAGSLVAKSLQ-FS--ADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGg-G~aGl~aA~~L~-~g--~~v~vie~~~ 45 (275)
+.+|+|||+ |..|.++|+.+. .| .+++++|.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 468999998 999999998886 56 4899999854
No 448
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.48 E-value=0.057 Score=45.08 Aligned_cols=29 Identities=21% Similarity=0.345 Sum_probs=26.6
Q ss_pred CeEEEEcCChHHHHHHHHhh-c-CCcEEEEc
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-F-SADVTLID 42 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~-g~~v~vie 42 (275)
++|.|||+|..|.+.|..|+ . |++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48999999999999999995 4 99999999
No 449
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.40 E-value=0.1 Score=44.35 Aligned_cols=34 Identities=29% Similarity=0.285 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..+.|+|+|+|..|.++|..|+ .|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4578999999999999999998 699999999865
No 450
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.39 E-value=0.1 Score=40.30 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC----cEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA----DVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~----~v~vie~~~~ 46 (275)
++|.|||.|..|.+.|..|. .|+ +|+++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 57999999999999999987 687 9999998753
No 451
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=93.39 E-value=0.11 Score=41.97 Aligned_cols=36 Identities=31% Similarity=0.394 Sum_probs=30.5
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 11 GKNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 11 ~~~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++++.|+|.|| |..|..++..|. +|++|+++++...
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 34568999996 999999999987 7999999998654
No 452
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.32 E-value=0.092 Score=41.30 Aligned_cols=31 Identities=19% Similarity=0.322 Sum_probs=28.1
Q ss_pred eEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+|.|||+|..|.+.|..|. .|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 6999999999999999987 689999999865
No 453
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.31 E-value=0.069 Score=45.92 Aligned_cols=36 Identities=19% Similarity=0.171 Sum_probs=29.0
Q ss_pred cCCCCeEEEEcCChHHHH-HHHHhh-cCCcEEEEcCCC
Q 023957 10 EGKNKRVVVIGGGVAGSL-VAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 10 ~~~~~~vvIIGgG~aGl~-aA~~L~-~g~~v~vie~~~ 45 (275)
+...++|.|||.|-+|++ +|..|. +|++|++.|.+.
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 344579999999999998 587777 799999999764
No 454
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.28 E-value=0.098 Score=47.21 Aligned_cols=34 Identities=38% Similarity=0.500 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||+|..|...|..|. .|++|+++|+++.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 467999999999999999997 6999999998764
No 455
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.27 E-value=0.093 Score=42.04 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=30.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++++|+|+|| |..|...+..|. .|++|+++.|++.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 3458999997 999999999887 7999999998764
No 456
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=93.26 E-value=0.1 Score=40.54 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=28.8
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|.|||.|..|...|..|. .|++|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 58999999999999999987 588999999865
No 457
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.25 E-value=0.11 Score=42.07 Aligned_cols=33 Identities=24% Similarity=0.452 Sum_probs=29.2
Q ss_pred CeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++|+|.|| |..|...+..|. +|++|+++++.+.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 48 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSS 48 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChH
Confidence 48999997 999999999987 7999999998754
No 458
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=93.22 E-value=0.065 Score=42.14 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=29.4
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
.++++|+|+|-+|.++|..|. .|.+|+|++|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 468999999999999999997 689999999874
No 459
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.19 E-value=0.11 Score=44.44 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 11 ~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
...+.|+|||.|..|..+|..|+ .|.+|+++|+.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34578999999999999999998 699999999865
No 460
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.18 E-value=0.087 Score=41.61 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=28.4
Q ss_pred CeEEEEcCChHHHHHHHHhhcCCcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~~g~~v~vie~~~~ 46 (275)
++|.|||+|..|...|..|.+|++|+++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~g~~V~~~~~~~~ 34 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLARRFPTLVWNRTFE 34 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHTTSCEEEECSSTH
T ss_pred CeEEEEcccHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 479999999999999988744999999998753
No 461
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=93.17 E-value=0.073 Score=43.07 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=27.9
Q ss_pred CCeEEEEcC-ChHHHHHHHHhh-cCC-------cEEEEcCCC
Q 023957 13 NKRVVVIGG-GVAGSLVAKSLQ-FSA-------DVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGg-G~aGl~aA~~L~-~g~-------~v~vie~~~ 45 (275)
+++|+|+|| |+.|..++..|. +|+ +|+++|+.+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 358999998 999999999987 565 899999754
No 462
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.12 E-value=0.099 Score=39.40 Aligned_cols=31 Identities=23% Similarity=0.393 Sum_probs=28.1
Q ss_pred eEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 15 RVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 15 ~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+|+|.|| |..|..++..|. +|++|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 6999998 999999999987 799999998865
No 463
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=93.12 E-value=0.11 Score=42.97 Aligned_cols=38 Identities=26% Similarity=0.341 Sum_probs=31.9
Q ss_pred ccCCCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 9 ~~~~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
|.++.++|+|+|+|..|...+..++ .|++|++++..+.
T Consensus 7 m~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 7 LRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp TSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 4445679999999999999999998 6999999987653
No 464
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.12 E-value=0.12 Score=41.23 Aligned_cols=34 Identities=29% Similarity=0.591 Sum_probs=30.5
Q ss_pred CCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+++|+|.|| |..|..++..|. +|++|+++++...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 468999999 999999999987 7999999998764
No 465
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.10 E-value=0.11 Score=44.50 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 358999999999999999997 6999999998764
No 466
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.09 E-value=0.11 Score=40.45 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHhh-cC----CcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FS----ADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g----~~v~vie~~~~ 46 (275)
++|.|||+|..|.+.|..|. .| ++|+++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999987 57 79999998764
No 467
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.08 E-value=0.081 Score=41.68 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~~ 46 (275)
.++++|+|+|-+|.++|+.|. .|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 468999999999999999998 688 8999998753
No 468
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.07 E-value=0.097 Score=40.74 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=28.1
Q ss_pred eEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCC
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKE 45 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~g-~~v~vie~~~ 45 (275)
+|.|||+|..|.+.|..|. .| ++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999987 68 9999999865
No 469
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.06 E-value=0.11 Score=38.42 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=28.9
Q ss_pred CeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|+|+|| |..|..++..|. +|++|+++.|++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 58999999 999999999987 799999999865
No 470
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=93.02 E-value=0.1 Score=43.55 Aligned_cols=34 Identities=35% Similarity=0.457 Sum_probs=30.0
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
...+|+|||+|..|..+|..|+ .|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4578999999999999999998 688 899999864
No 471
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.97 E-value=0.11 Score=44.57 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+|.|||.|..|...|..|. .|++|+++++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 368999999999999999997 6999999998764
No 472
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.96 E-value=0.065 Score=43.80 Aligned_cols=33 Identities=33% Similarity=0.393 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHhh-cC-------CcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FS-------ADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g-------~~v~vie~~~~ 46 (275)
++|.|||+|..|.+.|..|. .| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999997 57 89999998765
No 473
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.95 E-value=0.097 Score=45.81 Aligned_cols=33 Identities=30% Similarity=0.395 Sum_probs=30.9
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.+++|+|+|..|...|..|. .|++|+++|+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 68999999999999999998 6999999999875
No 474
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.95 E-value=0.14 Score=41.35 Aligned_cols=33 Identities=24% Similarity=0.444 Sum_probs=29.3
Q ss_pred CCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
.+.|+|.|| |..|..++..|. +|++|+++++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 468999998 999999999987 699999999854
No 475
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.94 E-value=0.1 Score=41.43 Aligned_cols=32 Identities=28% Similarity=0.236 Sum_probs=28.8
Q ss_pred eEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 15 ~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+|.|||.|..|...|..|. .|++|+++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6999999999999999987 6999999998753
No 476
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=92.92 E-value=0.12 Score=42.67 Aligned_cols=81 Identities=16% Similarity=0.156 Sum_probs=56.4
Q ss_pred CCcchhhHHHHHhhhCCCCEEEEEeCCCccc-----------------------Cc------------------------
Q 023957 129 GGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-----------------------EF------------------------ 161 (275)
Q Consensus 129 ~g~~~~~~a~~l~~~~~~~~v~~~~~~~~~~-----------------------~~------------------------ 161 (275)
+|..|+.+|..|....+|.+++++++.+... ..
T Consensus 8 aG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 87 (381)
T 3c4a_A 8 AGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHNEPSLMS 87 (381)
T ss_dssp CSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESSSEEECC
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCCeeEEec
Confidence 6777888888887654578888888754330 00
Q ss_pred --------CCcchHHHHHHHHHhCCCEEEcCceeeeecCCCCCceEEcCCCcEEeecEEEEcCCCCC
Q 023957 162 --------IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 220 (275)
Q Consensus 162 --------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 220 (275)
....+.+.+.+.+++.|++++.+++|++++.. +.+.+|.||.|.|..+
T Consensus 88 ~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 88 TGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNH 143 (381)
T ss_dssp CCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGG
T ss_pred CCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCc
Confidence 00124556677777889999999999988642 1257899999999654
No 477
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.90 E-value=0.11 Score=40.97 Aligned_cols=33 Identities=30% Similarity=0.368 Sum_probs=29.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
.++|+|||+|-+|.+.|..|. .|.+|++++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 368999999999999999997 588999999864
No 478
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=92.90 E-value=0.11 Score=41.59 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=29.2
Q ss_pred CCCeEEEEcCC-hHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGG-VAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG-~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..++++|||+| +.|..+|..|. .|.+|++++++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 35799999999 67999998887 699999998864
No 479
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.87 E-value=0.083 Score=42.94 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=30.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++++|+|.|| |..|..++..|. +|++|+++++...
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4579999996 999999999986 7999999998654
No 480
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=92.77 E-value=0.14 Score=40.45 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=29.4
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
..++++|+|+|-+|-++|+.|. .|. +|+|++|+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3578999999999999999997 688 699998865
No 481
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.77 E-value=0.15 Score=40.29 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=29.3
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCC---cEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSA---DVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~---~v~vie~~~~ 46 (275)
++|.|||+|..|.+.|..|. .|+ +|+++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 68999999999999999987 688 8999998764
No 482
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.76 E-value=0.14 Score=41.58 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
..+|.|||.|..|-+.|..|+ .|++|+++|+++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~ 42 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRS 42 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357999999999999999998 6999999998753
No 483
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.73 E-value=0.13 Score=41.30 Aligned_cols=34 Identities=15% Similarity=0.354 Sum_probs=29.6
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
..++++|+|+|-+|-++|+.|. .|. +|+|+.|.+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3578999999999999999998 688 899999873
No 484
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.72 E-value=0.076 Score=42.12 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=27.8
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|.|||+|..|...|..|. .|++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 58999999999999999987 699999998 54
No 485
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.69 E-value=0.14 Score=40.65 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=29.3
Q ss_pred CCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++.|+|+|| |..|...+..|. +|++|+++.|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 357999998 999999999887 799999999875
No 486
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.67 E-value=0.14 Score=41.37 Aligned_cols=34 Identities=21% Similarity=0.459 Sum_probs=28.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~--~v~vie~~~ 45 (275)
.+.+|+|||+|..|.++|+.|. .+. +++++|.+.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3468999999999999999887 444 799999854
No 487
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.59 E-value=0.13 Score=40.66 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=29.6
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
..++++|+|+|-+|-++|+.|. .|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3578999999999999999998 687 899998765
No 488
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=92.55 E-value=0.1 Score=41.64 Aligned_cols=34 Identities=15% Similarity=0.289 Sum_probs=26.8
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
+.+|-+||-|..|...|..|. .|++|+++|+++.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 358999999999999999997 7999999998764
No 489
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=92.55 E-value=0.14 Score=42.26 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=30.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 12 ~~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.+++|+|.|| |..|..++..|. +|++|+++++...
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 64 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN 64 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCc
Confidence 4578999999 999999999987 7999999998653
No 490
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.49 E-value=0.17 Score=39.79 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=29.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
..++++|+|+|-+|.++|+.|. .|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3578999999999999999997 685 899998865
No 491
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=92.49 E-value=0.086 Score=42.66 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=28.6
Q ss_pred CCeEEEEc-CChHHHHHHHHhh-cC--CcEEEEcCCCC
Q 023957 13 NKRVVVIG-GGVAGSLVAKSLQ-FS--ADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIG-gG~aGl~aA~~L~-~g--~~v~vie~~~~ 46 (275)
+++|+||| +|..|.+.+..|. .| .+++++|.++.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~ 45 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA 45 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence 35899999 7999999999987 56 68999997653
No 492
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=92.45 E-value=0.16 Score=41.74 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=30.0
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
..++|+|+|.|..|..+|..|. .|.+|++.|++.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~ 206 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNK 206 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3578999999999999999998 699999998753
No 493
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=92.41 E-value=0.15 Score=40.34 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=28.1
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
.+.++|+|+|-+|.++|..|. .| +|++++|+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 468999999999999999997 69 999998864
No 494
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.41 E-value=0.12 Score=41.61 Aligned_cols=31 Identities=29% Similarity=0.418 Sum_probs=27.5
Q ss_pred eEEEEcC-ChHHHHHHHHhh-cC--CcEEEEcCCC
Q 023957 15 RVVVIGG-GVAGSLVAKSLQ-FS--ADVTLIDPKE 45 (275)
Q Consensus 15 ~vvIIGg-G~aGl~aA~~L~-~g--~~v~vie~~~ 45 (275)
+|+|||| |..|.++|..|. .+ .+++++|.++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 999999999987 45 5899999876
No 495
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.36 E-value=0.14 Score=40.71 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=27.1
Q ss_pred CeEEEEcCChHHHHHHHHhh-cC--CcEEEEcCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FS--ADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g--~~v~vie~~~ 45 (275)
++|.|||+|..|.++|+.|. ++ -++.|+|.++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 47999999999999999987 44 3799999765
No 496
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.36 E-value=0.16 Score=41.21 Aligned_cols=33 Identities=33% Similarity=0.323 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 14 ~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
++|.|||.|..|.+.|..|+ .|++|+++++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 57999999999999999997 6899999998753
No 497
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.21 E-value=0.15 Score=43.71 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023957 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (275)
Q Consensus 13 ~~~vvIIGgG~aGl~aA~~L~-~g~~v~vie~~~~ 46 (275)
.++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 368999999999999999997 6999999998753
No 498
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.20 E-value=0.17 Score=39.99 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=29.3
Q ss_pred CCCeEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023957 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (275)
Q Consensus 12 ~~~~vvIIGgG~aGl~aA~~L~-~g~-~v~vie~~~ 45 (275)
..++++|+|+|-+|-++|+.|. .|. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 3578999999999999999997 685 899998865
No 499
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.19 E-value=0.18 Score=40.21 Aligned_cols=33 Identities=21% Similarity=0.422 Sum_probs=29.2
Q ss_pred CCeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 13 NKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 13 ~~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
+++|+|+|| |..|..++..|. +|++|+++.|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 357999997 999999999886 799999999875
No 500
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=92.17 E-value=0.15 Score=40.65 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=26.8
Q ss_pred CeEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023957 14 KRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (275)
Q Consensus 14 ~~vvIIGg-G~aGl~aA~~L~-~g~~v~vie~~~ 45 (275)
++|+|.|| |..|..++..|. +|++|+++++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 57999998 999999999987 699999999754
Done!