BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023958
MKWEMEIDEIEAVLEKIWDLHDKLSDAIHSISRTHFLNSIKALKKTDKNKLYNDVVEDNR
AGFVFVKGFRVDDNESASAIQEAKSLNAIRTALENLEDQLEVLHTVQTNQRAEKDAAIAR
LEQSRIVLAMRLSEHHGKKHKVIEEALAFVGDVQDAARFISPDNLYGSPVSPSGQNFAAP
EGRMCNGLIHALISSFDFAKKTLKLDQVGGILSNAAIVAVSMIALLHLHQAAYKEHPQKQ
DERVYSNRAVRKTTQLESSSPNTQLNQLDVMSARG

High Scoring Gene Products

Symbol, full name Information P value
PDV1
AT5G53280
protein from Arabidopsis thaliana 7.9e-78
PDV2
AT2G16070
protein from Arabidopsis thaliana 9.4e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023958
        (275 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2154262 - symbol:PDV1 "AT5G53280" species:3702...   783  7.9e-78   1
TAIR|locus:2052996 - symbol:PDV2 "AT2G16070" species:3702...   136  9.4e-07   1


>TAIR|locus:2154262 [details] [associations]
            symbol:PDV1 "AT5G53280" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009707
            "chloroplast outer membrane" evidence=IDA] [GO:0010020 "chloroplast
            fission" evidence=IMP] GO:GO:0016021 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB013388 GO:GO:0009707 GO:GO:0010020
            EMBL:AB252216 EMBL:AB252218 EMBL:AY087298 EMBL:AK221634
            EMBL:BT024498 IPI:IPI00540065 RefSeq:NP_200140.1 UniGene:At.29561
            STRING:Q9FK13 DNASU:835409 EnsemblPlants:AT5G53280.1 GeneID:835409
            KEGG:ath:AT5G53280 TAIR:At5g53280 eggNOG:NOG289228
            HOGENOM:HOG000237665 InParanoid:Q9FK13 OMA:LEFFHTI PhylomeDB:Q9FK13
            ProtClustDB:CLSN2686525 Genevestigator:Q9FK13 Uniprot:Q9FK13
        Length = 272

 Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
 Identities = 161/274 (58%), Positives = 205/274 (74%)

Query:     4 EMEIDEIEAVLEKIWDLHDKLSDAIHSISRTHFLNSIKALKKTDKNKL-YNDVVEDNRAG 62
             EMEI+EIEAVLEKIWDLHDKLSD IH IS++HFL S+K   +++K K  + +  ED R G
Sbjct:     3 EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRPG 62

Query:    63 FVFVKGFRVDDNESASAIQEAKSLNAIRTALENLEDQLEVLHTVQTNQRAEKDAAIARLE 122
             +VF+KGF VDDN+S   IQEAKSLNAIRTALENLEDQLE  HT+ T QR EKD AIARLE
Sbjct:    63 YVFIKGFAVDDNDST--IQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLE 120

Query:   123 QSRIVLAMRLSEHHGKKHKVIEEALAFVGDVQDAARFISPDNLYGSPVSPSGQNFAAPEG 182
             QSRI+LAMRL+EHHGK + V+EEALAFVG ++  + ++SPD+LY S  +P G N + P+G
Sbjct:   121 QSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGAN-SIPDG 179

Query:   183 RMCNGLIHALISSFDFAKKTLKLDQVGGILSNAAIVAVSMIALLHLHQAAYKEHP-QKQD 241
                N +I+A  S+F FAK+ L  + V G+L NAAI A+S++A+LHLHQ A  EH  QK++
Sbjct:   180 IESNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKE 239

Query:   242 ERVYSNRAVRKTTQLESSSPNTQLNQLDVMSARG 275
             +R Y ++  RKT   + SS +  L+ LDVM ARG
Sbjct:   240 DRFYRSQQ-RKTYGRDKSSADRSLDHLDVMMARG 272


>TAIR|locus:2052996 [details] [associations]
            symbol:PDV2 "AT2G16070" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0043572 "plastid fission"
            evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0031359 "integral to chloroplast outer membrane" evidence=IDA]
            [GO:0009536 "plastid" evidence=IDA] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC007134 GO:GO:0031359 EMBL:AB252217
            EMBL:AB252219 EMBL:AY056812 EMBL:AY080829 EMBL:AY113976
            EMBL:AY088807 IPI:IPI00544657 IPI:IPI00548142 PIR:D84536
            RefSeq:NP_028242.1 RefSeq:NP_849959.1 UniGene:At.14413
            IntAct:Q9XII1 STRING:Q9XII1 PaxDb:Q9XII1 PRIDE:Q9XII1
            EnsemblPlants:AT2G16070.2 GeneID:816104 KEGG:ath:AT2G16070
            TAIR:At2g16070 eggNOG:NOG241472 HOGENOM:HOG000242113
            InParanoid:Q9XII1 OMA:SQIDRSR PhylomeDB:Q9XII1
            ProtClustDB:CLSN2688151 Genevestigator:Q9XII1 GO:GO:0043572
            Uniprot:Q9XII1
        Length = 307

 Score = 136 (52.9 bits), Expect = 9.4e-07, P = 9.4e-07
 Identities = 47/154 (30%), Positives = 76/154 (49%)

Query:     5 MEIDE-IEAVLEKIWDLHDKLSDAIHSISRTHFLNSI--KALKKTDKNKLYNDVVEDNRA 61
             ME +E I  +L +  +L  K+SD I + S T   N    + L   +  K  ++++ +   
Sbjct:     1 MEDEEGIGLILARATELRLKISDCIDNSSTTVSDNGDGNEDLSPGEGRK--SEIIGNQDK 58

Query:    62 GFVFVKGFRVDDNESASAIQEAKSLNAIRTALENLEDQLEVLHTVQTNQRAEKDAAIARL 121
              F  +    VD+        EA+ L  IR ALE LE QL  L  ++  Q+ EK  A++ +
Sbjct:    59 DFDSISSEDVDE-------AEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEI 111

Query:   122 EQSRIVLAMRLSEHHGKKHKVIEEALAFVGDVQD 155
             + SR +L  +L E+ GK  +V+ E   F G+  D
Sbjct:   112 DYSRKMLLEKLKEYKGKDFEVLRETTTFAGERVD 145


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.356    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      275       275   0.00079  115 3  11 22  0.38    34
                                                     33  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  184 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.16u 0.12s 25.28t   Elapsed:  00:00:01
  Total cpu time:  25.16u 0.12s 25.28t   Elapsed:  00:00:01
  Start:  Sat May 11 04:40:28 2013   End:  Sat May 11 04:40:29 2013

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