BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023968
(274 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJV5|TATC_ARATH Sec-independent protein translocase protein TATC, chloroplastic
OS=Arabidopsis thaliana GN=TATC PE=1 SV=2
Length = 340
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/282 (82%), Positives = 253/282 (89%), Gaps = 9/282 (3%)
Query: 2 IENLDVTDIPRDET------LENLNQDGVE---SPLYNFLYPDKELLPDDKEMSIFDHLE 52
+ L+ D P + T +E+ D E S +Y FLYP KE LPDDKEM+IFDHLE
Sbjct: 59 VSALNDDDSPTETTPGVGSAVEDRPPDSSEDRSSSVYEFLYPRKEELPDDKEMTIFDHLE 118
Query: 53 ELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGY 112
ELR+RIFVSVLAVGAAILGCFA+SK+LI+FLEAPVK++GVRFLQLAPGEFFFTTLKVSGY
Sbjct: 119 ELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKVSGY 178
Query: 113 CGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFF 172
CGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYAG+AFSYWVLTPAALNFF
Sbjct: 179 CGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAALNFF 238
Query: 173 VNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVV 232
VNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVG+V+ DQMLSIWRYVV
Sbjct: 239 VNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWRYVV 298
Query: 233 VGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 274
VGAV+AAAV+TPSTDPVTQMLLA PLLGLY GGAWMVKLTGR
Sbjct: 299 VGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340
>sp|Q94G17|TATC_PEA Sec-independent protein translocase protein TATC, chloroplastic
OS=Pisum sativum GN=TATC PE=1 SV=1
Length = 353
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/272 (81%), Positives = 248/272 (91%)
Query: 3 ENLDVTDIPRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSV 62
EN D+ D +E LEN +DG S +Y+FLYP KELLPDDKEMSIFDHLEELR+RIF+SV
Sbjct: 82 ENKDMIDGISEEALENFKEDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISV 141
Query: 63 LAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVI 122
L VG +ILGCFA+SK+L+ LEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSP+I
Sbjct: 142 LGVGGSILGCFAFSKDLVKILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPII 201
Query: 123 LYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVES 182
LYEIIAF++PGLT+ ER+FLGPIVLGSSVLFYAGI FSY VL PAALNFFVNYAEG VES
Sbjct: 202 LYEIIAFIIPGLTKEERKFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVES 261
Query: 183 LWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVL 242
LWSIDQYFEFVLVLMFSTGLSFQVP+IQLLLGQ+GLV+ D+MLS+WRYVVVGAV+AAAV+
Sbjct: 262 LWSIDQYFEFVLVLMFSTGLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVV 321
Query: 243 TPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 274
TPSTDP+TQ+LLAAPLLGLY GGAWMVKL GR
Sbjct: 322 TPSTDPLTQVLLAAPLLGLYLGGAWMVKLAGR 353
>sp|Q9AVE6|TATC_ORYSJ Sec-independent protein translocase protein TATC, chloroplastic
OS=Oryza sativa subsp. japonica GN=TATC PE=2 SV=1
Length = 359
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/263 (85%), Positives = 241/263 (91%)
Query: 12 RDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILG 71
++ + + +D +S LYNFLYP KELLPDDKEMSIFDHLEELR RIFVSVLAVGAAILG
Sbjct: 97 QNGSFGGITEDEEQSSLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILG 156
Query: 72 CFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVL 131
CFAYSK+LI LEAPV +GVRFLQL+PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVL
Sbjct: 157 CFAYSKDLIRILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVL 216
Query: 132 PGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFE 191
PGLTR ER+FLGPIVLGSSVLFY GI FSY VL PAALNFFVNYA+G VESLWSIDQYFE
Sbjct: 217 PGLTRDERKFLGPIVLGSSVLFYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFE 276
Query: 192 FVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQ 251
FVLVL+FSTGLSFQVPVIQLLLGQVGLV+SDQMLSIWRYVVVGAV+AAAVLTPSTDP+TQ
Sbjct: 277 FVLVLLFSTGLSFQVPVIQLLLGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ 336
Query: 252 MLLAAPLLGLYFGGAWMVKLTGR 274
MLLA PLLGLY GGAWMVKLTGR
Sbjct: 337 MLLAGPLLGLYLGGAWMVKLTGR 359
>sp|C4IZX0|TATC_MAIZE Sec-independent protein translocase protein TATC, chloroplastic
OS=Zea mays GN=TATC PE=2 SV=1
Length = 356
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/270 (82%), Positives = 245/270 (90%), Gaps = 4/270 (1%)
Query: 9 DIPRDETLENLNQDGV----ESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLA 64
D P +EN + G +S LY FLYP K+LLPDDKEMSIFDHLEELR RIF+SVLA
Sbjct: 87 DPPPGPPVENGSFGGPSQEEQSALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLA 146
Query: 65 VGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILY 124
VGAAILGCFA+SK+L++FLEAPV ++GVRFLQL+PGEFFFTTLKVSGYCGLLLGSP+ILY
Sbjct: 147 VGAAILGCFAFSKDLVIFLEAPVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILY 206
Query: 125 EIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLW 184
EIIAFV+PGLTR ER+FLGPIVLGSSVLFY GI FSY VL+PAALNFFVNYA+G VESLW
Sbjct: 207 EIIAFVIPGLTRDERKFLGPIVLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLW 266
Query: 185 SIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTP 244
SIDQYFEF+LVLMFSTGLSFQVPVIQLLLGQ+GLV+SDQMLSIWRYVVVGAV+AAAVLTP
Sbjct: 267 SIDQYFEFILVLMFSTGLSFQVPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTP 326
Query: 245 STDPVTQMLLAAPLLGLYFGGAWMVKLTGR 274
STDP+TQMLLA PLLGLY GGAWMVK+TGR
Sbjct: 327 STDPLTQMLLAGPLLGLYLGGAWMVKITGR 356
>sp|P54086|TATC_SYNY3 Sec-independent protein translocase protein TatC OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=tatC PE=3 SV=1
Length = 254
Score = 302 bits (774), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/236 (61%), Positives = 193/236 (81%), Gaps = 2/236 (0%)
Query: 39 LPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLA 98
+PDD EMS+FDHL+ELR RIF+S+ AV ++ CF + K L+ +L+ P + V+FLQL+
Sbjct: 21 VPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQLS 78
Query: 99 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 158
PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ERR LGP+VLGSSVLF+AG+
Sbjct: 79 PGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAGLG 138
Query: 159 FSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGL 218
F+Y+ L PAAL FFV+Y VVE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG +G+
Sbjct: 139 FAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFLGI 198
Query: 219 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 274
V+S+QML WR+V++GA++ A+LTPSTDP+TQ LLA +LGLYFGG V+L G+
Sbjct: 199 VSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254
>sp|Q6B8S9|YCF43_GRATL Uncharacterized tatC-like protein ycf43 OS=Gracilaria
tenuistipitata var. liui GN=ycf43 PE=3 SV=1
Length = 238
Score = 250 bits (639), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 170/233 (72%), Gaps = 2/233 (0%)
Query: 42 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGE 101
+ EMSIF+HLEELRQRIF++ L CF Y K + L+ P + G++FLQLAPGE
Sbjct: 8 NTEMSIFEHLEELRQRIFIAALIFIVITAICFTYMKNISYILQQP--AIGIKFLQLAPGE 65
Query: 102 FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSY 161
+ FT++KV+ Y G LL SP I+Y+I F+LPGLT+ E F+ PI+ S +LF++GI F+Y
Sbjct: 66 YLFTSIKVALYSGFLLSSPFIIYQITLFILPGLTKKESNFIVPILFISIILFFSGIVFAY 125
Query: 162 WVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTS 221
+L PAAL F +NY +VE +WS +QYF F+L+L+FSTG++FQ+P+IQ++LG + + +S
Sbjct: 126 IILVPAALKFLINYGNEIVEPIWSFEQYFNFILLLLFSTGIAFQIPIIQVILGILKIFSS 185
Query: 222 DQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 274
+M + W+Y+V+GA + AA++TPSTDP+TQ++++ +L LY G ++K+ +
Sbjct: 186 SEMYAYWKYIVLGATVIAAIITPSTDPITQIIMSIAILALYSSGIIILKILNK 238
>sp|O78493|YCF43_GUITH Uncharacterized tatC-like protein ycf43 OS=Guillardia theta
GN=ycf43 PE=3 SV=1
Length = 290
Score = 237 bits (605), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 168/228 (73%), Gaps = 2/228 (0%)
Query: 42 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGE 101
+ EMS+ +HLEE+RQR F S + I+ C + K ++ L+ P + G++FLQ APGE
Sbjct: 54 EAEMSLAEHLEEIRQRAFWSFSVLTTMIISCIIFVKNIVKTLQEP--AAGIKFLQFAPGE 111
Query: 102 FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSY 161
+FF ++KV+ Y G+L+ SP I+Y+I+ FVLPG+T+ ER+ L PI++GS +LF G+ F Y
Sbjct: 112 YFFASIKVAAYSGILISSPFIVYQILLFVLPGMTKDERKTLLPIIIGSMILFLLGLIFGY 171
Query: 162 WVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTS 221
++L PA+LNFF+ Y VVE WS +QYFEF+LVL+F T L+FQ+PV+QL+LG + +V+
Sbjct: 172 YILVPASLNFFIKYGSDVVEPFWSFEQYFEFILVLLFGTALAFQLPVLQLVLGFLRIVSG 231
Query: 222 DQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMV 269
M SIWRYV++ + + AVLTPS DP+TQ+LL++ +L LYFGGA +V
Sbjct: 232 KTMFSIWRYVILLSTVVGAVLTPSVDPLTQILLSSIILILYFGGASLV 279
>sp|P51264|YCF43_PORPU Uncharacterized tatC-like protein ycf43 OS=Porphyra purpurea
GN=ycf43 PE=3 SV=1
Length = 254
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/256 (46%), Positives = 179/256 (69%), Gaps = 16/256 (6%)
Query: 11 PRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQR-IFVSVLAVGAAI 69
P++ L N+N + P +D MSI +HLEELRQR +FV + + AA
Sbjct: 5 PQNNLLANINTNSENLP------------ENDVPMSITEHLEELRQRTVFVFIFFLLAAT 52
Query: 70 LGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAF 129
+ F K ++ +AP + G++FLQLAPGE+FF+++K++ YCG++ +P +Y++I +
Sbjct: 53 IS-FTQIKIIVEIFQAP--AIGIKFLQLAPGEYFFSSIKIAIYCGIVATTPFGVYQVILY 109
Query: 130 VLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQY 189
+LPGLT ER+ + PI++GS VLF G F+Y+VL PAALNF ++Y +VE LWS +QY
Sbjct: 110 ILPGLTNKERKVILPILIGSIVLFIVGGIFAYFVLAPAALNFLISYGADIVEPLWSFEQY 169
Query: 190 FEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPV 249
F+F+L+L+FSTGL+F++P+IQLLLG G V++ QML WRY+++ + I AVLTPSTDPV
Sbjct: 170 FDFILLLLFSTGLAFEIPIIQLLLGISGTVSASQMLLAWRYIIIISTIIGAVLTPSTDPV 229
Query: 250 TQMLLAAPLLGLYFGG 265
TQ+++++ +L LYF G
Sbjct: 230 TQIIMSSAVLALYFSG 245
>sp|Q9TLS5|YCF43_CYACA Uncharacterized tatC-like protein ycf43 OS=Cyanidium caldarium
GN=ycf43 PE=3 SV=1
Length = 239
Score = 221 bits (562), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 169/231 (73%), Gaps = 2/231 (0%)
Query: 41 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPG 100
D +MSI++HLEELRQR S++A+ +++ C LI ++ P + G++FLQL+PG
Sbjct: 8 DSFQMSIYEHLEELRQRSIESIVALLISMVVCSLNINILIELIKQP--AIGIKFLQLSPG 65
Query: 101 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 160
E+FFT++K++ Y G++L SP+I YEII F++PGLT+ ERR L PI++ S LF AG+ F
Sbjct: 66 EYFFTSIKITLYLGIILSSPIIFYEIIIFIIPGLTKKERRLLIPILIASGCLFVAGLIFG 125
Query: 161 YWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVT 220
Y +TP A+ FF+NY + ++E +WS +YF+F+++ +FST +SFQ+P+ Q+LLG + ++
Sbjct: 126 YIYITPIAVRFFINYGKDMIEPIWSFKEYFDFIILSLFSTAISFQIPIFQILLGSLKIIN 185
Query: 221 SDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKL 271
S MLS+WRYVVVG+ I +A++TPSTDP+ Q+ L+ ++ LYF ++KL
Sbjct: 186 SKMMLSVWRYVVVGSTIFSAIITPSTDPLIQLFLSVAVMFLYFSSILVLKL 236
>sp|Q1XDM3|YCF43_PORYE Uncharacterized tatC-like protein ycf43 OS=Porphyra yezoensis
GN=ycf43 PE=3 SV=1
Length = 254
Score = 219 bits (558), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 173/255 (67%), Gaps = 14/255 (5%)
Query: 11 PRDETLENLNQDGVESPLYNFLYPDKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAIL 70
P++ L N N D V+ P +D MSI +HLEELRQR L A
Sbjct: 5 PQNNLLTNENIDHVDIP------------ENDIPMSITEHLEELRQRTLFVFLFFLFATT 52
Query: 71 GCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFV 130
F K ++ L+AP + G++FLQLAPGE+FF+++KV+ YCG++ +P +Y++I ++
Sbjct: 53 ISFTQIKIIVAILQAP--AVGIKFLQLAPGEYFFSSIKVAIYCGIVATTPFAVYQVILYI 110
Query: 131 LPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYF 190
LPGLT ER+ + P+++ S +LF G F+Y+VL PAAL F ++Y +VE LWS +QYF
Sbjct: 111 LPGLTGKERKIILPLLISSVLLFITGGIFAYFVLAPAALTFLISYGSDIVEPLWSFEQYF 170
Query: 191 EFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVT 250
+F+L+L+ STGL+F++P+IQLLLG G +S QM+ WRY+++ A IA A+LTPSTDPVT
Sbjct: 171 DFILLLLLSTGLAFEIPIIQLLLGVSGTFSSSQMIRAWRYIIIIATIAGAILTPSTDPVT 230
Query: 251 QMLLAAPLLGLYFGG 265
Q+++++ +L LYFGG
Sbjct: 231 QLIMSSAVLLLYFGG 245
>sp|P49538|YCF43_ODOSI Uncharacterized tatC-like protein ycf43 OS=Odontella sinensis
GN=ycf43 PE=3 SV=1
Length = 263
Score = 215 bits (547), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 159/223 (71%), Gaps = 2/223 (0%)
Query: 44 EMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFF 103
E+ +H+EEL+QR+F + + K L+ LE PV + V+F QL+PGE+F
Sbjct: 35 ELPFSEHIEELKQRLFHTFWIILILTFISLCEVKLLVKILELPVNN--VKFFQLSPGEYF 92
Query: 104 FTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWV 163
+T+K+S Y G L GSP + +II F+LPGLT+ E + + P++L S LF G+ FSY+
Sbjct: 93 VSTVKISFYTGFLFGSPFAIGQIILFLLPGLTKKETKIILPLLLSSLGLFGFGLVFSYYA 152
Query: 164 LTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQ 223
L PAALNFF+NY++ V+E LWS DQYFEF+LVL +STGL+FQ+P+IQ+LLG + ++++ Q
Sbjct: 153 LIPAALNFFLNYSDEVIEPLWSFDQYFEFILVLFYSTGLAFQIPIIQILLGLLNIISAKQ 212
Query: 224 MLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGA 266
ML+ WRY+++ + I A+LTPSTDP+TQ+LL+ +L LYF G
Sbjct: 213 MLAAWRYIILVSTIIGAILTPSTDPLTQLLLSIAILMLYFSGV 255
>sp|D2BJS8|TATC_DEHSV Sec-independent protein translocase protein TatC OS=Dehalococcoides
sp. (strain VS) GN=tatC PE=3 SV=1
Length = 262
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 132/231 (57%), Gaps = 1/231 (0%)
Query: 44 EMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFF 103
+M I H ELRQR ++A+ ++ F ++ +I FL AP + QL E+
Sbjct: 24 KMPIGGHFNELRQRFTRGIIALVMGVMVAFFFATPIIGFLTAP-GGPDFKPAQLGVMEYA 82
Query: 104 FTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWV 163
VS + G ++ SP ILY++IAF+ P L R E++F+ + +V+F AG+AF+Y+V
Sbjct: 83 SVFFNVSLWAGFIIASPYILYQLIAFITPALNRNEKKFIFIAIPAVTVMFLAGLAFAYYV 142
Query: 164 LTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQ 223
P ALN +++ + VV ++ I Y V ++ + GL F+ P I ++L ++G+V+
Sbjct: 143 ALPPALNILLHWGDDVVLTVVGIKDYMNVVTRILIALGLIFETPFIIMVLARLGVVSPQW 202
Query: 224 MLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 274
+ S + VV A + AA++TP+ DPV Q ++A PL+ LY W+ KL R
Sbjct: 203 LASKRKIWVVIAFVIAALITPTFDPVNQTIMAGPLIVLYEISIWLSKLVYR 253
>sp|A0L833|TATC_MAGSM Sec-independent protein translocase protein TatC OS=Magnetococcus
sp. (strain MC-1) GN=tatC PE=3 SV=1
Length = 271
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 135/224 (60%), Gaps = 4/224 (1%)
Query: 42 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRFLQLA 98
+++ + +HL ELR R+ +SV A+ + C+++S+++ FL AP+ + + A
Sbjct: 6 EQKAPLVEHLIELRNRLMISVGAIIVGFILCYSFSEQIFEFLAAPLHEILGPQAKMIYTA 65
Query: 99 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 158
E FFT +KVS + GL L PV+ ++ F+ PGL + ER + P + + VLF+ G
Sbjct: 66 LHEAFFTQIKVSFFAGLFLAMPVLFTQMWLFIAPGLYQHERSAILPFLFVTPVLFFMGGT 125
Query: 159 FSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGL 218
+Y+ + P A FF+ + +E+L S+ +Y V+ L+ + G++F++PV LL + G+
Sbjct: 126 LAYYFVFPLAFKFFLGFQSSTIEALPSMREYLSLVIKLIIAFGITFELPVGLLLAIKAGV 185
Query: 219 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
V++ ++ +Y +V A +AAA+LTP DP TQ++LA P++ +Y
Sbjct: 186 VSTAGLVDKRKYNIVLAFVAAAILTPP-DPFTQVMLAIPIMLMY 228
>sp|P54085|TATC_AZOCH Sec-independent protein translocase protein TatC OS=Azotobacter
chroococcum mcd 1 GN=tatC PE=3 SV=2
Length = 255
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 129/235 (54%), Gaps = 10/235 (4%)
Query: 40 PD-DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRFL 95
PD D++M + HL ELR R+ SV AV F +++++ + AP+++ EG +
Sbjct: 5 PDSDQDMPLVAHLTELRSRLLRSVAAVLLIFAALFYFAQDIYALVSAPLRAYLPEGATMI 64
Query: 96 QLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYA 155
F K++ L L PV+L+++ F+ PGL + E+R P++ S +LFYA
Sbjct: 65 ATGVASPFLAPFKLTLMISLFLAMPVVLHQVWGFIAPGLYQHEKRIAMPLMASSVLLFYA 124
Query: 156 GIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQ 215
G+AF+Y+V+ P FF + V + I QY +FVL L F+ G++F+VPV LL
Sbjct: 125 GMAFAYFVVFPIMFGFFASVTPEGVAMMTDIGQYLDFVLTLFFAFGVAFEVPVATFLLIW 184
Query: 216 VGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL-----LGLYFGG 265
VG+V + + YV+VG + VLTP D +Q LLA P+ +G++FG
Sbjct: 185 VGIVDVASLRNSRPYVIVGCFVVGMVLTPP-DVFSQTLLAVPMWLLFEIGVFFGA 238
>sp|Q9RW63|TATC_DEIRA Sec-independent protein translocase protein TatC OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=tatC PE=3 SV=1
Length = 270
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 127/229 (55%), Gaps = 6/229 (2%)
Query: 40 PDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVK------SEGVR 93
P+ +FDHLEELR+R+ +SV+ + ++ F Y +LI ++ P+ + V+
Sbjct: 17 PELASAPLFDHLEELRRRLILSVVFLAVGMVIAFTYRVQLIELVKVPLTYSELYTTGKVQ 76
Query: 94 FLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF 153
+ + ++ + GL L P I+++I AF+ PGL ERR+ P +LG+ F
Sbjct: 77 LVTTKLASQLLLSFNLAFWAGLTLALPFIVWQIWAFIAPGLYPQERRWGLPFILGAGFAF 136
Query: 154 YAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLL 213
AG+ F Y ++ P + F + + G V + + +Y V+ + + G++F++P++ ++L
Sbjct: 137 AAGVVFGYKLVLPTMVPFLIEFLAGTVTQMQDLQEYIGTVVTFLVAFGVAFELPILAVIL 196
Query: 214 GQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
++G+V + WR+ ++G +I AAV+TP+ DP L+A PL LY
Sbjct: 197 TRLGIVNHTMLRQGWRFALIGIMILAAVITPTPDPANMALVAVPLYALY 245
>sp|O67305|TATC_AQUAE Sec-independent protein translocase protein TatC OS=Aquifex
aeolicus (strain VF5) GN=tatC PE=1 SV=1
Length = 240
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 139/236 (58%), Gaps = 10/236 (4%)
Query: 45 MSIFDHLEELRQRIFVSVLA--VGAAILGCFAYSKELIMFLEAPV-KS-EGVRFLQLAPG 100
M + +HL ELR R+ +S++A +G+ I F ++K + L+ P+ KS V + L+P
Sbjct: 1 MPLTEHLRELRYRLIISIIAFLIGSGI--AFYFAKYVFEILKEPILKSYPEVELITLSPT 58
Query: 101 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 160
E F +K+S G ++ SPVILY+ F+ P L E+R P++LGS +LF G F+
Sbjct: 59 EPLFILIKISLAVGFIIASPVILYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFA 118
Query: 161 YWVLTPAALNFF--VNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGL 218
Y+++ P AL F + + + + S+D Y FVL L+ + G++F++P++ +L + G+
Sbjct: 119 YFIVLPLALKFLLGLGFTQLLATPYLSVDMYISFVLKLVVAFGIAFEMPIVLYVLQKAGV 178
Query: 219 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 274
+T +Q+ S +Y +V A + A++ P D TQ+L+A PLL LY ++ KL R
Sbjct: 179 ITPEQLASFRKYFIVIAFVIGAIIAP--DVSTQVLMAIPLLLLYEISIFLGKLATR 232
>sp|Q9ZM59|TATC_HELPJ Sec-independent protein translocase protein TatC OS=Helicobacter
pylori (strain J99) GN=tatC PE=3 SV=1
Length = 249
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 121/213 (56%), Gaps = 4/213 (1%)
Query: 50 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKV 109
HL+ELR+R+ VSV + A LGCF + K + F++ K +QL+P E +K+
Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWKNIFEFVKNSYKG---TLIQLSPIEGVMVAVKI 64
Query: 110 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAAL 169
S +++ P+I +++ F+ PGL + E++ + P V S +F G AFSY+V+ P +
Sbjct: 65 SFSAAIVISMPIIFWQLWLFIAPGLYKNEKKVILPFVFFGSGMFLMGAAFSYYVVFPFII 124
Query: 170 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWR 229
+ + V + S Y F L+ G++F++PV+ L +VGL+T + + ++
Sbjct: 125 EYLATFGSDVFAANISASSYVSFFTRLILGFGVAFELPVLAYFLAKVGLITDASLKAYFK 184
Query: 230 YVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
Y +V I AA++TP D V+Q+ +A PL+GLY
Sbjct: 185 YAIVVIFIVAAIITPP-DVVSQIFMALPLVGLY 216
>sp|C0QD59|TATC_DESAH Sec-independent protein translocase protein TatC
OS=Desulfobacterium autotrophicum (strain ATCC 43914 /
DSM 3382 / HRM2) GN=tatC PE=3 SV=1
Length = 270
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 132/228 (57%), Gaps = 5/228 (2%)
Query: 39 LPDDKEMSIF-DHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRF 94
+ ++E S F +HL ELR R+ S +AVG + + + + L L AP+ + EG +
Sbjct: 1 MSREEEKSPFTEHLGELRDRLVRSFIAVGVGFVIAYCFKERLFDILTAPLIAAMGEGQKM 60
Query: 95 LQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFY 154
+ E FFT LKVS G++L +PV+ YE FV PGL R E+RF+ P+V+ S F
Sbjct: 61 IFTGLPEAFFTYLKVSLLTGVILATPVLFYEFWMFVSPGLYRKEKRFVLPVVILSIFFFC 120
Query: 155 AGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLG 214
G +F Y+++ P FF+ ++ ++++ S+ +Y F ++ + G F++P++ +
Sbjct: 121 VGSSFGYFIVFPYGFQFFLGFSSDTIQAMPSMKEYLGFASKMLLAFGFVFELPLVLTFMA 180
Query: 215 QVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
++GLV+ + + +Y ++ AA++TP D VTQ+++A PL+ LY
Sbjct: 181 RMGLVSVEFLKKNRKYAILIFFTGAALITPP-DVVTQIMMAIPLMILY 227
>sp|O25701|TATC_HELPY Sec-independent protein translocase protein TatC OS=Helicobacter
pylori (strain ATCC 700392 / 26695) GN=tatC PE=3 SV=1
Length = 253
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 121/213 (56%), Gaps = 4/213 (1%)
Query: 50 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKV 109
HL+ELR+R+ VSV + A LGCF + K + F++ K +QL+P E +K+
Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWKSIFEFVKNSYKGT---LIQLSPIEGVMVAVKI 64
Query: 110 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAAL 169
S +++ P+I +++ F+ PGL + E++ + P V S +F G AFSY+V+ P +
Sbjct: 65 SFSAAIVISMPIIFWQLWLFIAPGLYKNEKKVILPFVFFGSGMFLIGAAFSYYVVFPFII 124
Query: 170 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWR 229
+ + V + S Y F L+ G++F++PV+ L +VGL+T + + ++
Sbjct: 125 EYLATFGSDVFAANISASSYVSFFTRLILGFGVAFELPVLAYFLAKVGLITDASLKAYFK 184
Query: 230 YVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
Y +V I AA++TP D V+Q+ +A PL+GLY
Sbjct: 185 YAIVVIFIVAAIITPP-DVVSQIFMALPLVGLY 216
>sp|P69423|TATC_ECOLI Sec-independent protein translocase protein TatC OS=Escherichia
coli (strain K12) GN=tatC PE=1 SV=2
Length = 258
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 126/224 (56%), Gaps = 4/224 (1%)
Query: 50 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLAPGEFFFTT 106
HL ELR+R+ ++AV L ++ ++ + AP+ + G + FFT
Sbjct: 12 HLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTP 71
Query: 107 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 166
+K++ L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P
Sbjct: 72 IKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFP 131
Query: 167 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 226
A F N A V+ I Y FV+ L + G+SF+VPV +LL +G+ + + +
Sbjct: 132 LAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRK 191
Query: 227 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVK 270
YV+VGA + +LTP D +Q LLA P+ L+ G + +
Sbjct: 192 KRPYVLVGAFVVGMLLTPP-DVFSQTLLAIPMYCLFEIGVFFSR 234
>sp|P69424|TATC_ECO57 Sec-independent protein translocase protein TatC OS=Escherichia
coli O157:H7 GN=tatC PE=3 SV=2
Length = 258
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 126/224 (56%), Gaps = 4/224 (1%)
Query: 50 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLAPGEFFFTT 106
HL ELR+R+ ++AV L ++ ++ + AP+ + G + FFT
Sbjct: 12 HLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTP 71
Query: 107 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 166
+K++ L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P
Sbjct: 72 IKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFP 131
Query: 167 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 226
A F N A V+ I Y FV+ L + G+SF+VPV +LL +G+ + + +
Sbjct: 132 LAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRK 191
Query: 227 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVK 270
YV+VGA + +LTP D +Q LLA P+ L+ G + +
Sbjct: 192 KRPYVLVGAFVVGMLLTPP-DVFSQTLLAIPMYCLFEIGVFFSR 234
>sp|Q1IN69|TATC_KORVE Sec-independent protein translocase protein TatC OS=Koribacter
versatilis (strain Ellin345) GN=tatC PE=3 SV=1
Length = 271
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 132/241 (54%), Gaps = 10/241 (4%)
Query: 43 KEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE------GVRFLQ 96
K MS +HLEELR+RI + + + A C+ + +++ F++ P+ + +
Sbjct: 20 KGMSFLEHLEELRRRIIWTFVYIAAGFGVCWWWHEQIYDFMQRPIMKALAANHLDQKLVY 79
Query: 97 LAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 156
L P E F LK++ GL + SP +LY++ F+ PGL + ERR++ P + + +LF G
Sbjct: 80 LNPTEPFNMYLKMAFIAGLFVASPFVLYQVWLFIAPGLYKRERRYVLPFMFSTVLLFLGG 139
Query: 157 IAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQV 216
F Y+++ P AL F + Y+ + +I +Y + L ++ G+ F++P++ L +
Sbjct: 140 GVFGYYMVYPNALTFLIGYSHQFSPMI-TISEYTDLFLTIILGLGIVFEMPILVFFLALM 198
Query: 217 GLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY---FGGAWMVKLTG 273
G+V++ M RY ++ + AA++TP+TD + + AAP++ LY G A++V
Sbjct: 199 GIVSAGWMWRNLRYSILVIFVIAAIITPTTDIMNMCVFAAPMILLYILSIGVAFLVHPKN 258
Query: 274 R 274
R
Sbjct: 259 R 259
>sp|Q8FBI6|TATC_ECOL6 Sec-independent protein translocase protein TatC OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=tatC
PE=3 SV=3
Length = 258
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 126/224 (56%), Gaps = 4/224 (1%)
Query: 50 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLAPGEFFFTT 106
HL ELR+R+ +++V L ++ ++ + AP+ + G + FFT
Sbjct: 12 HLIELRKRLLNCIISVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTP 71
Query: 107 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 166
+K++ L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P
Sbjct: 72 IKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFP 131
Query: 167 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 226
A F N A V+ I Y FV+ L + G+SF+VPV +LL +G+ + + +
Sbjct: 132 LAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRK 191
Query: 227 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVK 270
YV+VGA + +LTP D +Q LLA P+ L+ G + +
Sbjct: 192 KRPYVLVGAFVVGMLLTPP-DVFSQTLLAIPMYCLFEIGVFFSR 234
>sp|Q3A8D5|TATC_PELCD Sec-independent protein translocase protein TatC OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tatC PE=3
SV=1
Length = 250
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 44 EMSIFDHLEELRQRIFVSVLAVGAAILG---CFAYSKELIMFLEAPVKS---EGVRFLQL 97
+ S+ DHL+ELR+R+ + A GA +LG C+A+S++L + AP++ EG + +
Sbjct: 3 DASLIDHLDELRRRLMI---AGGAWLLGALICYAFSQQLFQAVSAPLRQALPEGSSLVFI 59
Query: 98 APGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGI 157
E FFT +K+S GLLL PVI +++ AFV PGL +E+R P VL SS F AG
Sbjct: 60 HATEPFFTYIKLSAMAGLLLSLPVIFWQLWAFVAPGLYPSEKRLALPFVLASSGCFGAGA 119
Query: 158 AFSYWVLTPAALNFFVNYAE--GVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQ 215
F + + P F V+Y G + ++ S+ Y L+ + GL F++P++ L +
Sbjct: 120 WFGFGYVFPLVFRFLVSYGTEVGNISAMLSMGAYLSLSCRLLLAFGLVFELPILIFFLTR 179
Query: 216 VGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
+G+V + R ++ A + AVLTP D V+Q+ +A P + LY
Sbjct: 180 MGIVDHFWLARRRRTALLLAFVVGAVLTP-PDIVSQLAIAGPFVVLY 225
>sp|P44560|TATC_HAEIN Sec-independent protein translocase protein TatC OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=tatC PE=3 SV=1
Length = 256
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 4/224 (1%)
Query: 42 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAP---VKSEGVRFLQLA 98
D+ + HL ELR R+ V+ V + +S ++ F+ AP V +G +
Sbjct: 5 DESQPLITHLVELRNRLLRCVICVVLVFVALVYFSNDIYHFVAAPLTAVMPKGATMIATN 64
Query: 99 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 158
FFT +K++ + + P +LY+I AF+ P L + E+R + P++ S++LFY G+A
Sbjct: 65 IQTPFFTPIKLTAIVAIFISVPYLLYQIWAFIAPALYQHEKRMIYPLLFSSTILFYCGVA 124
Query: 159 FSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGL 218
F+Y+++ P +FF A V I Y +F L L + G+ F+VP+ +LL G+
Sbjct: 125 FAYYIVFPLVFSFFTQTAPEGVTIATDISSYLDFALALFLAFGVCFEVPIAIILLCWTGI 184
Query: 219 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
T + Y++V A +LTP D +Q LLA P+ L+
Sbjct: 185 TTVKALSEKRPYIIVAAFFIGMLLTPP-DVFSQTLLAIPMCLLF 227
>sp|Q3ADS0|TATC_CARHZ Sec-independent protein translocase protein TatC
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=tatC PE=3 SV=1
Length = 243
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 133/222 (59%)
Query: 41 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPG 100
+DK M++F+HLE LR+ I +SV+A+ + + Y + L PV + ++ + +
Sbjct: 2 EDKPMTLFEHLEALRKVIIISVIAIVIGSIIAYNYVDYFLNILLQPVTALKMKLVFINVT 61
Query: 101 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 160
E F T LK++ G++L SP+IL++I +FV PGL AER+F+ ++ +LF AGI F+
Sbjct: 62 EAFMTKLKIAIILGIILASPIILWQIWSFVAPGLKPAERKFILRMIPVIIILFVAGIVFA 121
Query: 161 YWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVT 220
++ + A F + + ++ + +I +Y F L + GL F++PV+ +L ++ +++
Sbjct: 122 FFTVFQIATRFLLQFGGDIMSPMITIGKYISFALNFLIPFGLVFELPVVVYILAKLNIIS 181
Query: 221 SDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
+ ++ +Y ++ I AA LTP D ++Q+L+AAPLL LY
Sbjct: 182 HEFLVKNRKYALLVVFILAAALTPGPDVISQLLMAAPLLILY 223
>sp|P66895|TATC_MYCTU Sec-independent protein translocase protein TatC OS=Mycobacterium
tuberculosis GN=tatC PE=3 SV=1
Length = 308
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 20/236 (8%)
Query: 42 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLE----------------- 84
D MS+ DHL ELR R+ +S+ A+ + F + I L+
Sbjct: 22 DATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQSA 81
Query: 85 -APVKSEG-VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL 142
A + ++G R L AP + F LKV G++L PV Y++ AF+ PGL + ERRF
Sbjct: 82 RADISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPVWFYQLWAFITPGLYQRERRFA 141
Query: 143 GPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGL 202
V+ ++VLF AG +Y VL+ AL F + V + S D+YF F+L L+ G+
Sbjct: 142 VAFVIPAAVLFVAGAVLAYLVLSK-ALGFLLTVGSDVQVTALSGDRYFGFLLNLLVVFGV 200
Query: 203 SFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL 258
SF+ P++ ++L GL+T +++ S R ++ + AA+ TP +DP + L A L
Sbjct: 201 SFEFPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIFTPGSDPFSMTALGAAL 256
>sp|P66896|TATC_MYCBO Sec-independent protein translocase protein TatC OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=tatC PE=3
SV=1
Length = 308
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 20/236 (8%)
Query: 42 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLE----------------- 84
D MS+ DHL ELR R+ +S+ A+ + F + I L+
Sbjct: 22 DATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQSA 81
Query: 85 -APVKSEG-VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL 142
A + ++G R L AP + F LKV G++L PV Y++ AF+ PGL + ERRF
Sbjct: 82 RADISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPVWFYQLWAFITPGLYQRERRFA 141
Query: 143 GPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGL 202
V+ ++VLF AG +Y VL+ AL F + V + S D+YF F+L L+ G+
Sbjct: 142 VAFVIPAAVLFVAGAVLAYLVLSK-ALGFLLTVGSDVQVTALSGDRYFGFLLNLLVVFGV 200
Query: 203 SFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL 258
SF+ P++ ++L GL+T +++ S R ++ + AA+ TP +DP + L A L
Sbjct: 201 SFEFPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIFTPGSDPFSMTALGAAL 256
>sp|O05523|TATCY_BACSU Sec-independent protein translocase protein TatCy OS=Bacillus
subtilis (strain 168) GN=tatC2 PE=1 SV=1
Length = 254
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 128/221 (57%), Gaps = 2/221 (0%)
Query: 43 KEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEF 102
+MS+ +H+ ELR+R+ + LA + F +K +I++L+ +++ + +
Sbjct: 7 NQMSLLEHIAELRKRLLIVALAFVVFFIAGFFLAKPIIVYLQETDEAKQLTLNAFNLTDP 66
Query: 103 FFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYW 162
+ ++ + G++L SPVILY++ AFV PGL ER+ + S +LF AG++FSY+
Sbjct: 67 LYVFMQFAFIIGIVLTSPVILYQLWAFVSPGLYEKERKVTLSYIPVSILLFLAGLSFSYY 126
Query: 163 VLTPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTS 221
+L P ++F ++ + V + I++YF F+L L GL FQ+PVI + L ++G+VT
Sbjct: 127 ILFPFVVDFMKRISQDLNVNQVIGINEYFHFLLQLTIPFGLLFQMPVILMFLTRLGIVTP 186
Query: 222 DQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
+ I +Y ++ AA++TP + ++ M++ PLL LY
Sbjct: 187 MFLAKIRKYAYFTLLVIAALITPP-ELLSHMMVTVPLLILY 226
>sp|P54078|TATC_MYCLE Sec-independent protein translocase protein TatC OS=Mycobacterium
leprae (strain TN) GN=tatC PE=3 SV=2
Length = 310
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 20/236 (8%)
Query: 42 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLE----------------- 84
D MS+ DHL ELR R+ +S+ A+ + F + I LE
Sbjct: 22 DATMSLIDHLTELRTRLLISLAAIVVTTIFGFIWYSHSIFGLESLGEWLRRPYCSLPQSA 81
Query: 85 -APVKSEG-VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL 142
A + +G R L AP + F +KV G++L SPV Y++ AF+ PGL ERRF
Sbjct: 82 RADISPDGQCRLLATAPFDQFMLRIKVGMAAGIVLASPVWFYQLWAFITPGLYTKERRFT 141
Query: 143 GPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGL 202
V+ ++VLF G +Y VL+ AL F + GV + S D+YF F+L L+ G+
Sbjct: 142 VAFVVPAAVLFAGGTVLAYLVLS-KALGFLLIVGSGVQVTALSGDRYFGFLLNLLVVFGV 200
Query: 203 SFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL 258
SF+ P++ ++L GL+T ++ S R ++ + AAV TP +DP + L A L
Sbjct: 201 SFEFPLLIVMLNIAGLLTYQRLKSWRRGLIFAMFVFAAVFTPGSDPFSMTALGAAL 256
>sp|D5AT98|TATC_RHOCB Sec-independent protein translocase protein TatC OS=Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
GN=tatC PE=3 SV=1
Length = 282
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 130/252 (51%), Gaps = 23/252 (9%)
Query: 41 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPV------KSEGVRF 94
D+ + +HL ELR RI ++ A A++ C+ + FL P+ + + +
Sbjct: 7 DETAAPLIEHLAELRTRILYALSAYVVAVVLCYIIWHPVFTFLTHPICEALAARGQACQL 66
Query: 95 LQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFY 154
+ E FF + ++ G L P+I +++ FV PGL R E+R P ++ S V+F+
Sbjct: 67 SLIKLQEGFFVAINIAMLGGFALAFPMIGFQLWRFVAPGLYRNEKRAFLPFLIASPVMFF 126
Query: 155 AGIAFSYWVLTPAALNFFVNYAEG----------------VVESLWSIDQYFEFVLVLMF 198
G AF Y+++ P A +FF+ + G V+ S+++Y + +
Sbjct: 127 VGAAFCYYIILPMAFSFFLGFQMGDVVAGADASDPANQMAVIGFTGSMEEYLKLTTKFVM 186
Query: 199 STGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL 258
+ G+ FQ+PV LLG+ GLV++ + S+ +Y VV + +A++TP D ++Q+++ A +
Sbjct: 187 AFGICFQMPVALTLLGKAGLVSAQALASVRKYAVVAMLTVSAIVTPP-DVMSQVIMFAVI 245
Query: 259 LGLYFGGAWMVK 270
LY G ++V+
Sbjct: 246 YPLYEGSIFLVR 257
>sp|Q9PHT8|TATC_CAMJE Sec-independent protein translocase protein TatC OS=Campylobacter
jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)
GN=tatC PE=3 SV=1
Length = 245
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 119/220 (54%), Gaps = 10/220 (4%)
Query: 50 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAP---VKSEGVRFLQLAP-GEFFFT 105
HL ELR+R+F+SV + + CFA ++ L+AP V E + + + E FT
Sbjct: 8 HLIELRKRLFISVACIVVMFIVCFALRSYILDILKAPLIAVLPEVAKHVNVIEVQEALFT 67
Query: 106 TLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLT 165
+KVS + + PVI ++ FV PGL E+R + P V +S++F G F Y+V+
Sbjct: 68 AMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKRLVVPFVSFASIMFAFGACFCYFVVV 127
Query: 166 PAALNFFVNYAEGVVES---LWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSD 222
P A F +N+ G+ E + +I Y +F ++ + GL+F++PVI ++GL+
Sbjct: 128 PLAFKFLINF--GLNEDFNPVITIGTYVDFFTKVVVAFGLAFEMPVIAFFFAKIGLIDDS 185
Query: 223 QMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
+ +R V+ + +A +TP D ++Q L+A PL GLY
Sbjct: 186 FLKRHFRIAVLVIFVFSAFMTPP-DVLSQFLMAGPLCGLY 224
>sp|D1BTU8|TATC_XYLCX Sec-independent protein translocase protein TatC OS=Xylanimonas
cellulosilytica (strain DSM 15894 / CECT 5975 / LMG
20990 / XIL07) GN=tatC PE=3 SV=1
Length = 276
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 7/229 (3%)
Query: 43 KEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELI------MFLEAPVKSEGVRFLQ 96
K M + +HL ELR R+ + + + + L+ + L A + + +
Sbjct: 29 KRMPLREHLAELRTRLLLVAGGLVVGAVVGWLLYDPLLVLLTRPLHLAAATQHKDIALNF 88
Query: 97 LAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 156
A G T +KVS + +++ P LY++ AFV PGLTR E+R + + LF G
Sbjct: 89 TALGSPLDTRIKVSLFLAVMVTCPWWLYQVWAFVTPGLTRREKRHAYGFLGAAVPLFLGG 148
Query: 157 IAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQV 216
S+WVL P A++ F ++ + +Y FV+ L+ + G++F PV+ + L
Sbjct: 149 AGLSWWVL-PHAVDIFASFVPAGSSQYVNAQEYLSFVMRLVLAFGVAFVAPVLLVALNLA 207
Query: 217 GLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGG 265
G+V + + WR+ V+ A + AAV+TP+ D +T +L+AAP+ LYFG
Sbjct: 208 GIVRHETLARGWRWAVLLAFVFAAVMTPTPDALTMVLVAAPICALYFGA 256
>sp|P42252|TATCD_BACSU Sec-independent protein translocase protein TatCd OS=Bacillus
subtilis (strain 168) GN=tatC1 PE=1 SV=4
Length = 242
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 120/222 (54%), Gaps = 4/222 (1%)
Query: 41 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPG 100
D KE + HLEELR+RI V++ A ++ F + +++ +L ++ + L P
Sbjct: 2 DKKETHLIGHLEELRRRIIVTLAAFFLFLITAFLFVQDIYDWL---IRDLDGKLAVLGPS 58
Query: 101 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 160
E + + +SG C + PV Y++ FV P LT+ ER+ + G LF AGI+F
Sbjct: 59 EILWVYMMLSGICAIAASIPVAAYQLWRFVAPALTKTERKVTLMYIPGLFALFLAGISFG 118
Query: 161 YWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVT 220
Y+VL P L+F + + G E++++ D+YF F++ L G F++P++ + L ++G++
Sbjct: 119 YFVLFPIVLSFLTHLSSGHFETMFTADRYFRFMVNLSLPFGFLFEMPLVVMFLTRLGILN 178
Query: 221 SDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
++ + ++ + ++TP D ++ L+ PLL L+
Sbjct: 179 PYRLAKARKLSYFLLIVVSILITPP-DFISDFLVMIPLLVLF 219
>sp|A0RW14|TATC_CENSY Sec-independent protein translocase protein TatC OS=Cenarchaeum
symbiosum (strain A) GN=tatC PE=3 SV=1
Length = 264
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 24/256 (9%)
Query: 43 KEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKE-----------------------L 79
EM HL+ELR+R V+ GA A+ E +
Sbjct: 2 SEMQFGKHLDELRRRALRVVVITGAVTAFLLAFHAEPAELWGATVYYPVPDPLHNMAAQI 61
Query: 80 IMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAER 139
+ A + EGV +Q PG+ FF + ++ G+ + +PV + E+ AF+ P L +E
Sbjct: 62 TDHMRAALVPEGVELIQTTPGQAFFAQVYIAALVGVTVSTPVAVRELAAFLRPALRESEI 121
Query: 140 RFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMF 198
I + LF AG AFSY V+ P L+F E + + ++ + FVL +
Sbjct: 122 HVGRSISAPAVGLFAAGCAFSYIVVIPYILDFLYKIGESAGITTFLNVMDFVSFVLQFLL 181
Query: 199 STGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL 258
+ G+SFQ+P++ + G+V RY ++G VI A +TP VT +A P+
Sbjct: 182 AFGISFQLPLVMFAVTASGMVDGRFWRRNIRYALLGIVIFGAAITPDGSGVTMWFVAGPM 241
Query: 259 LGLYFGGAWMVKLTGR 274
+GLYF G + + R
Sbjct: 242 IGLYFAGMFFAERRER 257
>sp|Q9Z9P4|TATC_BACHD Sec-independent protein translocase protein TatC OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=tatC PE=3 SV=1
Length = 253
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 130/238 (54%), Gaps = 8/238 (3%)
Query: 41 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGV---RFLQL 97
++++MS+ DH+ ELR+RI + V+ A++ F + +I +L+ ++ + F
Sbjct: 2 NERDMSLMDHIAELRRRILIIVVFFVIALVVGFFLATPMITYLQGAPTAQDLPMNAFKLT 61
Query: 98 APGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGI 157
P + T S + +L P+ILY++ AFV PGL ER+ + + LF G+
Sbjct: 62 DPLRVYMTFAFTSAF---ILVFPIILYQLWAFVSPGLHENERKATLAYIPIAFFLFLGGL 118
Query: 158 AFSYWVLTPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQV 216
+F+Y++L P + F AE + + L+ I++YF F+ + G+ FQ+PV+ + L ++
Sbjct: 119 SFAYFILFPFLIQFIGGLAERLHINELYGINEYFTFLFQITMPFGVLFQLPVVVMFLTRL 178
Query: 217 GLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 274
G+VT + + S+ +Y ++ A +TP + ++ +++ PLL LY W+ LT R
Sbjct: 179 GIVTPEFLRSVRKYAFFVLLVVAGFITPP-ELISHLMVTVPLLLLYEFSIWVSHLTYR 235
>sp|B2UN92|TATC_AKKM8 Sec-independent protein translocase protein TatC OS=Akkermansia
muciniphila (strain ATCC BAA-835) GN=tatC PE=3 SV=1
Length = 348
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 97/165 (58%), Gaps = 1/165 (0%)
Query: 99 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 158
PGE F T+K+S Y G+++ P++LY ++ F++PGL ER+ L + LF AG
Sbjct: 146 PGEAFMLTIKLSLYAGVVISFPLLLYFLLQFIIPGLLEHERKLLYKCMAVGFGLFLAGTL 205
Query: 159 FSYWVLTPAALNFFVNYA-EGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVG 217
F Y+++ P L FF Y+ E + + W I Y F ++ GL+F++PV+ + ++G
Sbjct: 206 FCYFIVLPRVLTFFYTYSLEFGISNEWRIGYYLSFATQMILMFGLAFELPVVVMPFVKLG 265
Query: 218 LVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
++T D M S RY +V + AAV+TP+ D T ML+A P+ LY
Sbjct: 266 VLTYDMMKSTRRYAIVAIAVLAAVITPTPDVATMMLMAVPMYALY 310
>sp|D0KWI6|TATC_HALNC Sec-independent protein translocase protein TatC
OS=Halothiobacillus neapolitanus (strain ATCC 23641 /
c2) GN=tatC PE=3 SV=1
Length = 366
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 4/225 (1%)
Query: 50 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLAPGEFFFTT 106
HL ELR R+ VLAV L F + EL L P+ G + + FF
Sbjct: 30 HLVELRNRLLKGVLAVLVLFLILFPFRNELFTMLADPLSRHMPAGSTMIAVEVASPFFIP 89
Query: 107 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 166
LK++ + + P +LY++ AF+ PGL + ER+ + P+V S++LFY G AF+Y+V+ P
Sbjct: 90 LKLTALTAVFIAIPFLLYQLWAFIAPGLYKHERKLVAPLVFSSTILFYLGAAFAYFVVFP 149
Query: 167 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 226
F V I +Y FV L F+ G F+VPV +LL VG+VT D++
Sbjct: 150 VVFGFLSTAGPSDVNFAPDIGEYLSFVTSLFFAFGFVFEVPVAIVLLVIVGVVTPDKLAG 209
Query: 227 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKL 271
RY ++ A I AA+LTP D ++Q ++A P++ LY G ++ +
Sbjct: 210 FRRYAILIAFIIAAILTP-PDVLSQFMMALPIIMLYEFGLFVSRF 253
>sp|Q9ZCG6|TATC_RICPR Sec-independent protein translocase protein TatC OS=Rickettsia
prowazekii (strain Madrid E) GN=tatC PE=3 SV=1
Length = 251
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 19/227 (8%)
Query: 49 DHLEELR---QRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVR-FLQLAPGE 101
+HL E + RIF + + + A C+ +S + FL P+ + VR + E
Sbjct: 8 EHLLEFKIRLLRIFTAFIIIFAI---CYYFSDYIYSFLLEPLAKLSGDTVRNIIYTGLTE 64
Query: 102 FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSY 161
FFT +K+S + + P+I E F+ PGL R E++ + I+ S +LF+ G F +
Sbjct: 65 AFFTYIKLSAFTAFTIIIPIIALECYLFISPGLYRHEKKIIAFILFMSPILFWCGSIFVF 124
Query: 162 WVLTPAALNFFVNYAEG------VVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQ 215
+ + P A NFF+++ + ++E+ I +Y V+ L+ + G++FQ+P++ ++L
Sbjct: 125 YFVMPKAWNFFLSFEKRDMIVPIILEA--RISEYLNLVIHLIIAFGIAFQLPIVIIVLNI 182
Query: 216 VGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
+ +V + + R VV I A +LTP D ++Q LA PLL LY
Sbjct: 183 LKIVKTQTLKKKRRIAVVINFIIAGILTPP-DILSQFALAIPLLLLY 228
>sp|Q2J9S4|TATC_FRASC Sec-independent protein translocase protein TatC OS=Frankia sp.
(strain CcI3) GN=tatC PE=3 SV=1
Length = 364
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 124/236 (52%), Gaps = 15/236 (6%)
Query: 41 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS--EGVRFLQ-- 96
+D M + +HL ELR R+ +++LA A + CF + + +L+AP RF
Sbjct: 23 EDSRMPLTEHLRELRNRVAIALLAFAIAGVVCFIFEPRIFDWLKAPYCDLPASKRFSPDG 82
Query: 97 LAPGE---FFF-------TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV 146
LA + +FF LK+S +++ SPV LY++ +F+ PGL R ERR+ V
Sbjct: 83 LAANDCTLYFFGILDAFTIRLKISMIAAVVVSSPVWLYQLWSFITPGLHRHERRWSLTFV 142
Query: 147 LGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQV 206
S VLF G F+Y L+ G+V S+ ++Y +V ++ GLSF+V
Sbjct: 143 GVSLVLFATGAVFAYLTLSTGLGLLLGFGGNGLV-SVLDGNRYLSYVQAMLLIFGLSFEV 201
Query: 207 PVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
P++ ++L G+V++ ++ S R + + AAV+TPS DP T + L P++ LY
Sbjct: 202 PLLVMMLNLAGIVSTAKLRSWRRPEIFLVFVFAAVVTPSQDPFTMLALGLPMVLLY 257
>sp|C4LIK6|TATC_CORK4 Sec-independent protein translocase protein TatC OS=Corynebacterium
kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=tatC
PE=3 SV=1
Length = 414
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Query: 92 VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSV 151
R L +P E F +K+ G GL++ P+ L EI F+ PGL + ERR+ + +
Sbjct: 101 CRLLATSPFEMFMLRMKMGGLAGLVMACPIWLIEIWRFITPGLLKNERRWTLSVGTIAGF 160
Query: 152 LFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQL 211
LF G+ +Y VL P L+ ++ + S + ++YF FV+ L+ GLSF+VP+
Sbjct: 161 LFVLGVVAAYLVL-PMGLDVLLHLGDSTQISALTGEKYFNFVIALILVFGLSFEVPLFTA 219
Query: 212 LLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVT 250
+L G+V +Q+ R ++V I AA+ TP DP++
Sbjct: 220 MLNLAGVVHYEQLKDKRRIMIVVIFIFAAIATPGQDPIS 258
>sp|O21266|YMF16_RECAM Uncharacterized tatC-like protein ymf16 OS=Reclinomonas americana
GN=YMF16 PE=3 SV=1
Length = 260
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 121/237 (51%), Gaps = 10/237 (4%)
Query: 44 EMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFF 103
+ I HL E+R RI + ++ + Y +E+ L P+ F+ E F
Sbjct: 4 NIPILTHLYEIRLRIIYLLYSIFLTCFCSYQYKEEIFYLLFIPLSKN---FIYTDLIEAF 60
Query: 104 FTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWV 163
T +K+S G+ L P+ LY+I +F++PG E++ + L S L++ G Y++
Sbjct: 61 ITYIKLSIIVGIYLSYPIFLYQIWSFLIPGFFLYEKKLFRLLCLTSIFLYFLGSCIGYYL 120
Query: 164 LTPAALNFFVNYAEGVVESLWSID---QYFEFVLV---LMFSTGLSFQVPVIQLLLGQVG 217
L P A FF+ + + + L++I+ + E++++ L+FS + FQ+PV+ L L ++
Sbjct: 121 LFPIAFTFFLGFQKLGKDQLFTIELQAKIHEYLILNTKLIFSLSICFQLPVLILFLFKIY 180
Query: 218 LVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 274
T ++ R++ + I AA+L+P D ++Q +L PL+ + + +KL +
Sbjct: 181 PKTYLWLIHKRRFIYLFFFILAAILSPP-DILSQFILVIPLILFFEISLFCIKLIQK 236
>sp|Q92ES8|TATC_LISIN Sec-independent protein translocase protein TatC OS=Listeria
innocua serovar 6a (strain CLIP 11262) GN=tatC PE=3 SV=1
Length = 247
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 122/223 (54%), Gaps = 2/223 (0%)
Query: 41 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPG 100
+ MS+ HL+ELR R+ + +L+ A SK LI+FL+ + V
Sbjct: 2 TEVSMSLTGHLKELRTRLLIILLSFFLAFFVGLFVSKPLILFLQKDDLPKEVILHVFKVT 61
Query: 101 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 160
+ F ++++ GL+L PVILY++ AFV PGL +E+R + + +LF G+ FS
Sbjct: 62 DAFQIYIEMAFIIGLILVFPVILYQLWAFVKPGLHASEQRITLRYIPITFLLFLCGVVFS 121
Query: 161 YWVLTPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLV 219
Y + P L F +A + VE+ + YF+F+L ++ S G+ F++P++ +LL ++ L+
Sbjct: 122 YVITFPFILKFMFQFAAELGVETTIGLATYFQFLLQIVLSFGVLFELPMVIMLLTRLSLI 181
Query: 220 TSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
T + M +Y +I AA + P + ++ +++ PL+GLY
Sbjct: 182 TPNGMRRARKYAYFCLLIIAAFIAPP-EILSHLMITIPLIGLY 223
>sp|D4GZD0|TATCO_HALVD Sec-independent protein translocase protein TatCo OS=Haloferax
volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC
14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=tatCo PE=3
SV=1
Length = 441
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 35/263 (13%)
Query: 42 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEA--------PVKSEGVR 93
D+EM + H+EE+ +R+ V + GA L F + L ++ P ++ +
Sbjct: 184 DQEMPLTAHIEEMIRRLAVVLGVAGAITLVLFPGADILNALVDTQAAFGVHIPSATDVIN 243
Query: 94 FLQ-----------------LAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR 136
FL P E T LKV+G G ++G PV +YE F+ PGL
Sbjct: 244 FLWNSHIPGAETIVDRRPRLYGPLELILTKLKVAGLAGTVIGLPVFVYETYLFMRPGLYP 303
Query: 137 AERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVL 196
ER++ V S VL G+ F+++V+ PA +F +Y EG + + + F +L+L
Sbjct: 304 KERKYYLAAVPTSLVLALVGVLFAHFVVLPAIFAYFTSYTEGTAVVAFGLKETFNLILIL 363
Query: 197 MFSTGLSFQVPVIQLLLGQVGLVT----SDQMLSIWRYVVVGAVIAAAVL-TPSTDPVTQ 251
M + FQ+P+ L + LVT D+ L W GA + A L +P +
Sbjct: 364 MGYMAVVFQIPLFVELAIMMNLVTRRWLEDRRLLFW-----GAFLGLAFLVSPDPTGMAP 418
Query: 252 MLLAAPLLGLYFGGAWMVKLTGR 274
+++ A ++ L+ G ++ TG
Sbjct: 419 IIIGATMITLFEGTLAALRWTGN 441
>sp|Q0W5V8|TATC_UNCMA Sec-independent protein translocase protein TatC OS=Uncultured
methanogenic archaeon RC-I GN=tatC PE=3 SV=1
Length = 241
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%)
Query: 35 DKELLPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRF 94
+ L P D EMS+ +HL ELR R+ + + +L F +S L+ + A V+
Sbjct: 4 ESSLPPGDMEMSLSEHLRELRNRLIIVIAVTLLLMLAIFPFSAGLVDAVLAHAVPSYVKI 63
Query: 95 LQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFY 154
AP E F L + + +G P+++YE F PGL E+RFL + S +LF
Sbjct: 64 TTYAPMEMFKARLTMCFIGAITVGFPLLVYEAFRFAAPGLYPHEKRFLYLVFPFSLLLFV 123
Query: 155 AGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLG 214
AG +Y+V P + + + V S+ + F V + GL FQVP+I +L
Sbjct: 124 AGGLVAYFVTLPLFFSIVIGHGLEVAAPALSVGETFSIVTNFVAGLGLVFQVPLIIVLAI 183
Query: 215 QVGLVTSDQMLS 226
++GLV + ++
Sbjct: 184 KMGLVKRETLVK 195
>sp|D2NT99|TATC_ROTMD Sec-independent protein translocase protein TatC OS=Rothia
mucilaginosa (strain DY-18) GN=tatC PE=3 SV=1
Length = 293
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 9/238 (3%)
Query: 35 DKELLPDDKEMSIFDHLEELRQR-IFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---E 90
++++ P+ + M + +HL E R R I ++ + AAI+G + I + AP++ E
Sbjct: 10 NRKINPEAR-MELKEHLREFRDRLIKAAIATIIAAIIGTVFLYQPFIEMISAPLQQINIE 68
Query: 91 GVRFLQLAPGEF---FFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVL 147
R L G F LKV Y GL++ SPV LY+ + F+LP L E+++L +
Sbjct: 69 TGRRANLNYGSVASPFDQLLKVGMYIGLVIASPVWLYQALRFLLPALHTKEKKYLFGFLT 128
Query: 148 GSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVP 207
S F G+A SY+ L P + + + + Y F+L + + +F +P
Sbjct: 129 ASIFAFACGVAISYFTL-PGVVYALLKFTPVNESNYIDAGVYISFILKFVVTFSCAFIIP 187
Query: 208 VIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGG 265
VI + + +GL+ +L WR+VVV + AA+ P +D + +L APLL +F
Sbjct: 188 VILVGINMLGLIRGKTILKSWRWVVVLVAVIAALTAPGSDIMMMFVLMAPLLIFFFAA 245
>sp|D0J948|TATC_BLASP Sec-independent protein translocase protein TatC OS=Blattabacterium
sp. subsp. Periplaneta americana (strain BPLAN) GN=tatC
PE=3 SV=1
Length = 266
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 31/251 (12%)
Query: 41 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIM--FLEAPVKSEGV------ 92
+ EM ++H+EELR+ + SV A+ A + +K +I L P K++ +
Sbjct: 4 EKNEMPFWEHIEELRKHLIHSVCAMIIATI-ILMNNKNVIFDYILFGPAKTDFITYRLFH 62
Query: 93 ---RFLQLAPGEFFF--TTLKVSGY------------C---GLLLGSPVILYEIIAFVLP 132
+ + F+F L++ C G +L P I YE F+ P
Sbjct: 63 KLGKIFHRSHHSFYFFSHNLEIQNRQIFGQFNIYVWTCFIGGFILSFPYIFYEFWKFIKP 122
Query: 133 GLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNF-FVNYAEGVVESLWSIDQYFE 191
L+ ER++ I++ + LF G+ F Y++L P ++F + +++ + Y
Sbjct: 123 ALSDEERKYSRGIIMMVTFLFILGVLFGYFILCPFLIHFGYTFRISSFPRNIFDLSDYIS 182
Query: 192 FVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQ 251
++ + S G++F P+ L ++ L++ + ++ + +I A+ +TP D +
Sbjct: 183 LIMHSILSMGITFLFPIFIYFLTKIELISYPFLKKYRKHAFLILLILASAITPG-DIFST 241
Query: 252 MLLAAPLLGLY 262
+++ PL+ LY
Sbjct: 242 IVVLIPLMILY 252
>sp|D4GZC9|TATCT_HALVD Sec-independent protein translocase protein TatCt OS=Haloferax
volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC
14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=tatCt PE=3
SV=1
Length = 718
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 152 LFYAGIAFSYWVLTPAALNFFVNYA--EGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVI 209
LF AG+A+ Y+V P F A G S +SI ++ +F+ +L S GL+ Q+P+
Sbjct: 137 LFAAGVAYGYFVFFPFTFAFLAQNAISAGFTPS-YSIVKWAQFIFLLTLSFGLASQLPLA 195
Query: 210 QLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
L +V + WR+ +VG A+ TP DP TQ++ A P++ LY
Sbjct: 196 MTGLSYAEVVPYELFRDKWRHAIVGIFAFGALFTPP-DPFTQIMWAVPVILLY 247
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
Query: 83 LEAPVKSEGV-RFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLT-----R 136
L A V+ E V + L P E +K S +L P++ Y FV P L R
Sbjct: 512 LPAAVRPEEVLNVVALHPMEALIFEVKFSTILAVLATLPLVAY----FVWPALRERNIIR 567
Query: 137 AERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESL-WSIDQYFEFVLV 195
RR + + G A Y + P + F V A + + I +F +
Sbjct: 568 KRRRTVFVWTGALAGGLLGGFALGYTYVAPTVITFLVEDALAANMIITYRITNFFWLIFF 627
Query: 196 LMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLA 255
GL VP++ +LL G ++ M + WR V V + +AV TP++ T ++
Sbjct: 628 TTAGIGLLADVPILMVLLNTAG-ISYRMMRNRWREVTVFILAISAVFTPAS-ITTMFMVT 685
Query: 256 APLLGLY 262
PL+ Y
Sbjct: 686 LPLMAAY 692
>sp|Q9TC94|YMF16_NEPOL Uncharacterized tatC-like protein ymf16 OS=Nephroselmis olivacea
GN=YMF16 PE=3 SV=1
Length = 247
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 92/224 (41%), Gaps = 13/224 (5%)
Query: 49 DHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS----EGVRFLQLAPGEFFF 104
H E++ R + C YS+ ++ F P+ + +G + E F
Sbjct: 7 QHFNEIKYRFLYIFFTFLLCFIICTIYSESIMFFYVHPLINLTSMQGKHLIFTEMSEAFH 66
Query: 105 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 164
T + + + + P Y+ AF +P + ER L + L + Y+++
Sbjct: 67 TYIFLCFFTSIYCTFPYFFYQFWAFFIPSTYQFERLQLRFLSFFFFTLLFFSCIIIYFII 126
Query: 165 TPAALNFFVNYAEGV------VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGL 218
P +FF+++ + +E+ I Y +F + + FQ P+ + L
Sbjct: 127 LPEIWSFFLHFEKKSYYFNLQLEA--RISSYIQFTFQIFSYFFVLFQCPLFTHFSLNLNL 184
Query: 219 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 262
+T +++ +Y+ +I AA L+P D ++Q L + ++ +Y
Sbjct: 185 LTISFLVNSRKYIYFLFLILAAFLSPP-DILSQFFLFSLIVFMY 227
>sp|O31777|BIOF1_BACSU 8-amino-7-oxononanoate synthase 1 OS=Bacillus subtilis (strain 168)
GN=kbl PE=3 SV=1
Length = 392
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 142 LGPIVLGSSVLF----YAGIAFSYWVLTPAALNFFVNYAEGV-------VESLWSIDQYF 190
LG GS VL + G F + P A+ A V +E LW YF
Sbjct: 245 LGGYAAGSKVLIDYLRHKGRPFLFSTSHPPAVTAACMEAIDVLLEEPEHMERLWENTAYF 304
Query: 191 EFVLVLMFSTGLSFQVPVIQLLLGQVGLVT--SDQMLS 226
+ +LV M T + P++ +L+G G+ SDQ+LS
Sbjct: 305 KAMLVKMGLTLTKSETPILPILIGDEGVAKQFSDQLLS 342
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.143 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,749,112
Number of Sequences: 539616
Number of extensions: 4194048
Number of successful extensions: 13178
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 13028
Number of HSP's gapped (non-prelim): 104
length of query: 274
length of database: 191,569,459
effective HSP length: 116
effective length of query: 158
effective length of database: 128,974,003
effective search space: 20377892474
effective search space used: 20377892474
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)