BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023972
(274 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CFV9|RIFK_MOUSE Riboflavin kinase OS=Mus musculus GN=Rfk PE=2 SV=2
Length = 155
Score = 154 bits (389), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 106/150 (70%)
Query: 123 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYK 182
+ S P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+K
Sbjct: 1 MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHK 60
Query: 183 MVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIH 242
MV+SIGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I
Sbjct: 61 MVVSIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQ 120
Query: 243 EDRKVAERALDLPLYSKYRDDPYLKITSSK 272
D + A++ LDLP + K +DD + +++ K
Sbjct: 121 GDIEEAKKQLDLPEHLKLKDDNFFQVSKGK 150
>sp|Q969G6|RIFK_HUMAN Riboflavin kinase OS=Homo sapiens GN=RFK PE=1 SV=2
Length = 155
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 105/146 (71%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV+S
Sbjct: 5 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 64
Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
IGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D +
Sbjct: 65 IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 124
Query: 247 VAERALDLPLYSKYRDDPYLKITSSK 272
A++ L+LP + K ++D + +++ SK
Sbjct: 125 EAKKRLELPEHLKIKEDNFFQVSKSK 150
>sp|O76206|RIFK_DROME Putative riboflavin kinase OS=Drosophila melanogaster GN=anon-84Ea
PE=2 SV=1
Length = 153
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
Query: 123 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYK 182
L P + GG +V+G GRGSK LGIPTAN E + P+G Y+GWA + V+K
Sbjct: 2 LSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHK 61
Query: 183 MVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIH 242
MV+SIGWNP+++N EK++E +LH+F+ D Y + L + IVGY+RPE +F SLE+LIA I
Sbjct: 62 MVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSLESLIAAIR 121
Query: 243 EDRKVAERALDLPLYSKYRDDPYL--KITSSK 272
D + A+ LD +K ++ P+ K+ SSK
Sbjct: 122 GDIEQAKAFLDEADKAKLKEAPFFTEKLCSSK 153
>sp|O74866|RIFK_SCHPO Riboflavin kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=fmn1 PE=1 SV=1
Length = 163
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 186
P G VV G GRGSK LGIPTAN+S + ++L SGVYFG+A + R V+ MVMS
Sbjct: 23 PIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKR-VFPMVMS 81
Query: 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246
+GWNPY+ N ++ E L+ EDFY+E + ++++GYIRPE N+ L+ LI IH D +
Sbjct: 82 VGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIR 141
Query: 247 VAERALDLPLYSKYRDDPYLKI 268
VA ++D P YS Y+ DP+ K+
Sbjct: 142 VALNSMDRPSYSSYKKDPFFKV 163
>sp|Q75DY2|RIFK_ASHGO Riboflavin kinase OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=FMN1 PE=3 SV=2
Length = 186
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 29/159 (18%)
Query: 134 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL------------------ 175
+V G GRGS LGIPTAN+ E ++E +GVYFGWA L
Sbjct: 27 IVAGFGRGSAELGIPTANVPIEQLPSEVNEMATGVYFGWARLRPNMDQEAQVHHRNDGSE 86
Query: 176 -----------STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGY 224
+ RGV+ +V+S+GWNP+++N++KT+E +L++F+EDFY ++ +GY
Sbjct: 87 VIYNFGSKLSETERGVFPIVLSVGWNPFYNNSKKTVELHILNDFEEDFYGAKIKFSFLGY 146
Query: 225 IRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDD 263
IRPE N+ + E LI IH D K+A L YS ++
Sbjct: 147 IRPELNYTTKEALIEDIHTDIKIASEVLHTEPYSSLKNQ 185
>sp|A4QQ05|RIFK_MAGO7 Riboflavin kinase OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=FMN1 PE=3 SV=3
Length = 200
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 86/143 (60%), Gaps = 16/143 (11%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEG-YSDVLSEHPSGVYFGWAGLSTRG------ 179
P+ + G V+ G GRGSK LGIPTANL + S +S SGVY+GWA L
Sbjct: 20 PYKMEGKVISGFGRGSKELGIPTANLPVDATISPWISSISSGVYYGWASLQLPPSHPESP 79
Query: 180 ---------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEAN 230
V+ MVMSIG+NP+++N E++ E +LH+F DFYD + L+I+G+IR E N
Sbjct: 80 SSSSCSPYVVFPMVMSIGYNPFYNNTERSAEVHILHKFTADFYDAPMRLLILGFIRDEKN 139
Query: 231 FPSLETLIAKIHEDRKVAERALD 253
+ SLE L+ I+ D VA +LD
Sbjct: 140 YDSLEALVKDINTDCDVARTSLD 162
>sp|P0C5D9|RIFK_CHAGB Riboflavin kinase OS=Chaetomium globosum (strain ATCC 6205 / CBS
148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=FMN1 PE=3
SV=1
Length = 235
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 91/183 (49%), Gaps = 43/183 (23%)
Query: 113 PPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTE-GYSDVLSEHPSGVYFG 171
PP G P P+ + G V+ G GRGSK LGIPTANL + + +S PSGVYFG
Sbjct: 9 PPLIGDPSGPAPPYPFRMSGLVISGFGRGSKELGIPTANLPVDDAQTPWISSIPSGVYFG 68
Query: 172 WAGLS-------------------------------------TRG-----VYKMVMSIGW 189
WA L+ RG VY MVMSIG+
Sbjct: 69 WASLNLPASHPDSLTSSAAAAAAAAAAAAAPGEDGGGAGEQRQRGGNGFAVYPMVMSIGY 128
Query: 190 NPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAE 249
NP++ N ++ E +LH F DFY E+ L+I G+IR E ++ LE LIA I D +VA+
Sbjct: 129 NPFYKNTVRSAEVHVLHRFGADFYGVEMRLLIAGFIREEKDYSGLEALIADIEFDCEVAK 188
Query: 250 RAL 252
R+L
Sbjct: 189 RSL 191
>sp|A5DAH9|RIFK_PICGU Riboflavin kinase OS=Meyerozyma guilliermondii (strain ATCC 6260 /
CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=FMN1 PE=3 SV=2
Length = 180
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 31/159 (19%)
Query: 131 GGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG----------- 179
G + G GRGS LGIPTAN+ + L++ +G+Y+GW L R
Sbjct: 22 AGTIESGFGRGSAELGIPTANIPV---TSELNKLETGIYYGWCRLVPRNQECAAKQRSDG 78
Query: 180 -----------------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIV 222
+ M MSIGWNP+++N KT E ++H+F E+FY +L ++
Sbjct: 79 KKVYFNNGTKLADDELETFPMAMSIGWNPFYNNETKTAEVHIIHKFRENFYGADLRYAVM 138
Query: 223 GYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYR 261
G+IRPE N+ + E LIA I++D ++ + AL P Y KYR
Sbjct: 139 GHIRPELNYTTKEALIADINKDIEITKDALSKPSYEKYR 177
>sp|Q6CT57|RIFK_KLULA Riboflavin kinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS
2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=FMN1 PE=3 SV=1
Length = 185
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 29/158 (18%)
Query: 134 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTR--------------- 178
V+ G GRGS LGIPTAN+ + ++ + +GVYFGW +
Sbjct: 26 VIAGFGRGSAELGIPTANVPIDDLPKIVEQLDTGVYFGWCKVRMAKDRDTKVEQRPDGRE 85
Query: 179 --------------GVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGY 224
V +V+S+GWNP++ N KT+E ++H+F ++FY ++ +GY
Sbjct: 86 VQYNNGTLLNDEDLAVLPVVLSVGWNPFYQNKNKTVELHIIHKFSDNFYGAQIKFNFLGY 145
Query: 225 IRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRD 262
IRPE ++ + + LIA IH D ++A+ L LP Y K +D
Sbjct: 146 IRPELDYTTKDALIADIHTDIEIAKEKLQLPGYRKLKD 183
>sp|A2QFH1|RIFK_ASPNC Riboflavin kinase OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=fmn1 PE=3 SV=1
Length = 214
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 88/171 (51%), Gaps = 32/171 (18%)
Query: 120 EGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS---GVYFGWAGL- 175
EG P + GPV+KG GRGSK LGIPTAN+ +D LS+HP GVY+G L
Sbjct: 15 EGPESPYPIRMSGPVIKGFGRGSKELGIPTANIP----ADELSQHPELSVGVYYGVVALD 70
Query: 176 -----STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE-------------------D 211
+ V V+SIG+NP++ N K+IE ++ D
Sbjct: 71 PARFSTGETVLPAVLSIGYNPFYKNESKSIEIHIMPPLSAPSPTATTSTDGQVTFHKLPD 130
Query: 212 FYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRD 262
FY L+L+I+GYIRPE ++ S E LI I D +VA R+L P Y Y D
Sbjct: 131 FYGTPLNLLILGYIRPEYDYISSEALIEDIRVDCEVARRSLQRPAYRCYLD 181
>sp|A3M0C9|RIFK_PICST Riboflavin kinase OS=Scheffersomyces stipitis (strain ATCC 58785 /
CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=FMN1 PE=3 SV=2
Length = 178
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 83/157 (52%), Gaps = 31/157 (19%)
Query: 134 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLS-----------TRG--- 179
VV G GRGS LGIPTAN+ +D L++ +G+Y+GW L T G
Sbjct: 24 VVSGFGRGSSELGIPTANIPI---NDDLNQLETGIYYGWCQLKPCTLPDECKTRTNGREV 80
Query: 180 --------------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYI 225
V MVMSIGWNP++ EK E ++H+FD+ FY ++ ++GYI
Sbjct: 81 IYNHGKNLRNDDLKVLPMVMSIGWNPFYHLKEKAAEVHIMHKFDDFFYGAQIKFNVLGYI 140
Query: 226 RPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRD 262
RPE ++ + E LI I+ D K+A ALD Y Y+D
Sbjct: 141 RPELDYTTKEALIEDINLDIKIALEALDRDAYQTYKD 177
>sp|Q4WHD2|RIFK_ASPFU Riboflavin kinase OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=fmn1 PE=3 SV=1
Length = 214
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 89/183 (48%), Gaps = 45/183 (24%)
Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS---GVYFGWAGL-- 175
G P P + GPV+KG GRGSK LGIPTAN+ EG L E+P GVY+G L
Sbjct: 16 GPEPPYPVRLSGPVIKGFGRGSKELGIPTANIPAEG----LEEYPDLQVGVYYGVVALDP 71
Query: 176 -------------------STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE------ 210
+ V V+SIG+NP++ N K+IE ++
Sbjct: 72 AKFQYQEGQGSTSTSSTGGAEAAVLPAVLSIGYNPFYKNKTKSIEIHIMPPLSSPSPTAD 131
Query: 211 -----------DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSK 259
DFY +L L+I+GYIRPE ++ SLE LI I D +VA ++L P Y+
Sbjct: 132 GAGEVKFHKLPDFYGTQLKLLILGYIRPEYDYVSLEALIEDIRVDCEVARKSLQRPAYAC 191
Query: 260 YRD 262
Y D
Sbjct: 192 YID 194
>sp|A5E1A0|RIFK_LODEL Riboflavin kinase OS=Lodderomyces elongisporus (strain ATCC 11503 /
CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=FMN1
PE=3 SV=1
Length = 182
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 33/167 (19%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL--------STR 178
P + P++ G GRGS LGIPTAN+ + L P+G+Y+GW + TR
Sbjct: 17 PIHTTAPIISGFGRGSSELGIPTANIPINAQLNSL---PTGIYYGWCKIHPVSDQNDETR 73
Query: 179 G---------------------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEEL 217
V+ MVMSIGWNP++ N EK E ++ +F+ DFY EL
Sbjct: 74 TRPDGQLILFNHGNKLQANELVVHPMVMSIGWNPFYQNKEKAAEIHIMSKFERDFYGAEL 133
Query: 218 HLVIVGYIRPEANFPSLETLIAKIHEDRKVAERAL-DLPLYSKYRDD 263
+++GY+RPE ++ + E LI I D +++ L + Y+KY+ +
Sbjct: 134 EFIVLGYVRPELDYTTKEALIEDILTDIRISRDILENKEEYTKYKKE 180
>sp|Q6M923|RIFK_NEUCR Riboflavin kinase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fmn-1
PE=3 SV=1
Length = 210
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 33/159 (20%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG------- 179
P+ + G V+ G GRGSK LGIPTANL + + + SG+YFGWA L
Sbjct: 24 PFRMEGEVISGFGRGSKELGIPTANLPVDDENAWIKNIDSGIYFGWASLKLPASHPNSVL 83
Query: 180 --------------------------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFY 213
+Y MVMSIG+NP++ N ++ E +L EF DFY
Sbjct: 84 YQKPPTSEPVMMDPEKLVDQETGQWQIYPMVMSIGYNPFYKNTVRSAEVHVLGEFAADFY 143
Query: 214 DEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERAL 252
+ L+I G+IR E ++ LE LIA IH D +VA +L
Sbjct: 144 GVGMRLLITGFIRNEKDYSGLEALIADIHFDCEVARHSL 182
>sp|A1DG00|RIFK_NEOFI Riboflavin kinase OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / FGSC A1164 / NRRL 181) GN=fmn1 PE=3 SV=1
Length = 218
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 89/187 (47%), Gaps = 49/187 (26%)
Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS---GVYFGWAGLS- 176
G P P + GPV+KG GRGSK LGIPTAN+ EG L+E+P GVY+G L
Sbjct: 16 GPEPPYPVRLSGPVIKGFGRGSKELGIPTANIPAEG----LAEYPDLQVGVYYGVVALDP 71
Query: 177 ------------------------TRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE-- 210
+ V+SIG+NP++ N K+IE ++
Sbjct: 72 AKFQYQEDQGEGSTSSTGGAGAGAGAAILPAVLSIGYNPFYKNKTKSIEIHIMPPLSSPS 131
Query: 211 ---------------DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLP 255
DFY +L L+I+GYIRPE ++ SLE LI I D +VA ++L P
Sbjct: 132 PTAEGAGEVKFHKLPDFYGTQLKLLILGYIRPEYDYVSLEALIEDIRVDCEVARKSLQRP 191
Query: 256 LYSKYRD 262
Y+ Y D
Sbjct: 192 AYACYID 198
>sp|Q2UMM4|RIFK_ASPOR Riboflavin kinase OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=fmn1 PE=3 SV=1
Length = 198
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 25/164 (15%)
Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL----- 175
G P P + GPV+KG GRGSK LGIPTAN+ +G SD + GVY+G L
Sbjct: 16 GPEPPFPIKLSGPVIKGFGRGSKELGIPTANIPPDGLSD-YPDLQVGVYYGVVALDPSRF 74
Query: 176 -STRGVYKMVMSIGWNPYFDNAEKTIEPWLLH----------------EFDE--DFYDEE 216
S + V+SIG+NP++ N +++E ++ +F++ DFY +
Sbjct: 75 TSETTILPAVLSIGYNPFYKNTTRSVEIHIMPPLSSPSPTANGEAGQVKFNKLPDFYGTK 134
Query: 217 LHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKY 260
L+L+I+GYIRPE ++ SLE L+ I D +VA ++L Y Y
Sbjct: 135 LNLLILGYIRPEYDYVSLEALVEDIRIDCEVARQSLQRKAYVSY 178
>sp|A1C603|RIFK_ASPCL Riboflavin kinase OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=fmn1 PE=3 SV=1
Length = 214
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 87/183 (47%), Gaps = 47/183 (25%)
Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS---GVYFGWAGL-- 175
G P P + GPV+KG GRGSK LGIPTAN+ E L+EHP GVY+G L
Sbjct: 16 GPEPPYPVRLSGPVIKGFGRGSKELGIPTANIPAE----ELAEHPDLQVGVYYGVVALDP 71
Query: 176 ---------------STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE---------- 210
S + V+SIG+NP++ N ++IE ++
Sbjct: 72 AKFQYHGDASRKGEDSQAAILPAVLSIGYNPFYKNKTRSIEIHIMPPLSSPSPTAEVTTQ 131
Query: 211 -------------DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLY 257
DFY +L L+I+GYIRPE ++ SLE L+ I D +VA +L P Y
Sbjct: 132 GQGHGQVKFHKLPDFYGTQLKLLILGYIRPEFDYVSLEALVEDIRVDCEVARASLQRPAY 191
Query: 258 SKY 260
+Y
Sbjct: 192 ERY 194
>sp|Q0CHR1|RIFK_ASPTN Riboflavin kinase OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=fmn1 PE=3 SV=1
Length = 205
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 87/170 (51%), Gaps = 34/170 (20%)
Query: 121 GTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS---GVYFGWAGL-- 175
G P P + GPV+KG GRGSK LGIPTAN+ +G L+E+P GVY+G L
Sbjct: 16 GPEPPFPIRLAGPVIKGFGRGSKELGIPTANIPADG----LAEYPDLQVGVYYGVVALNP 71
Query: 176 -------STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE------------------ 210
++ + V+SIG+NP++ N ++IE ++
Sbjct: 72 AQSEVPSTSAQILPAVLSIGYNPFYKNTTRSIEIHIMPPLTAPSPTATGTPGHVTFHKLP 131
Query: 211 DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKY 260
DFY L L+I+GYIRPE ++ S E LI I D +VA R+L Y +Y
Sbjct: 132 DFYGTSLKLLILGYIRPEYDYVSAEALIEDIRVDCEVARRSLQRGAYVRY 181
>sp|Q5AW61|RIFK_EMENI Riboflavin kinase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=fmn1 PE=3 SV=1
Length = 210
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 88/172 (51%), Gaps = 36/172 (20%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVL-SEHPSGVYFGWAGL---------- 175
P + GPV+KG GRGSK LGIPTAN+ +G +VL E GVY+G L
Sbjct: 22 PIRLSGPVIKGFGRGSKELGIPTANIPVDGLEEVLPKELGVGVYYGVVALDPATAPAPSS 81
Query: 176 --STRG----VYKMVMSIGWNPYFDNAEKTIEPWLLHEFD-------------------E 210
ST G + V+SIG+NPY+ N ++IE ++
Sbjct: 82 SDSTSGDAAPILPAVLSIGYNPYYKNKTRSIEIHIMPSLTLPSPTAPSEEKEKVKFHKLP 141
Query: 211 DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRD 262
DFY +L+L+++GYIRPE ++ S+E L+ I D +VA +L P Y Y D
Sbjct: 142 DFYGTKLNLLMLGYIRPEYDYVSMEALVEDIRIDCEVARASLLRPAYRVYLD 193
>sp|Q6CG11|RIFK_YARLI Riboflavin kinase OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=FMN1 PE=3 SV=1
Length = 192
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 32/158 (20%)
Query: 127 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL----------- 175
P ++ G GRGS LGIPTAN+ + VL +G+Y+G +
Sbjct: 25 PIKFASSIIPGYGRGSADLGIPTANIPIDDVP-VLDALDTGIYYGLVQILKTDKPSEKKT 83
Query: 176 --------------------STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDE 215
V MVMS+GWNP++ N +K+ E ++H+F FY
Sbjct: 84 SEFQKDRVVDFQYTNKLNDQEINAVLPMVMSVGWNPFYKNDQKSAEIHIIHKFAHTFYGA 143
Query: 216 ELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 253
+ ++++GY+RPE NF SLE L+ +IH D KV+E ++
Sbjct: 144 SIKVMVLGYLRPEKNFTSLEALVDEIHNDIKVSEEKME 181
>sp|Q03778|RIFK_YEAST Riboflavin kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=FMN1 PE=1 SV=1
Length = 218
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 31/159 (19%)
Query: 134 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLST---------------- 177
+V G GRGS LGIPTAN+ +++ GVYFG+A + T
Sbjct: 57 IVCGFGRGSAELGIPTANVPINQLPKGINDLDLGVYFGFAHIKTVDGQELSVETRRDGRT 116
Query: 178 ---------------RGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIV 222
V MV+S+G NP++ N KT+E ++H+F DFY + I+
Sbjct: 117 VVYNYGQYLSEANDDLSVLPMVLSVGKNPFYGNDFKTMELHIIHDFKNDFYGARVKFNIL 176
Query: 223 GYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYR 261
G+IRPE N+ + E LI I+ D + A+ L P Y ++
Sbjct: 177 GHIRPELNYTTKEALIEDINIDIRTAQTVLATPPYQVFK 215
>sp|Q6FM49|RIFK_CANGA Riboflavin kinase OS=Candida glabrata (strain ATCC 2001 / CBS 138 /
JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FMN1 PE=3 SV=2
Length = 189
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 30/157 (19%)
Query: 134 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG-------------- 179
+V G GRGS LGIPTAN+ + +V+++ GVYFG+A ++
Sbjct: 27 IVCGFGRGSSELGIPTANVPVDQLPEVVNKLELGVYFGYAKVTPVAHDLEQVEREDGRVV 86
Query: 180 ----------------VYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVG 223
V +V+S+G NP++ N KT+E +LH+F FY ++ I+G
Sbjct: 87 SYNYGSHLEEDNGDLEVLPVVLSVGKNPFYHNDFKTVEIHILHDFKSTFYGAKIKFNILG 146
Query: 224 YIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKY 260
Y+RPE ++ S E LI I D +++++ LD Y +
Sbjct: 147 YVRPELDYTSKEALIEDIKTDIEISKQVLDTEPYRAH 183
>sp|Q08623|HDHD1_HUMAN Pseudouridine-5'-monophosphatase OS=Homo sapiens GN=HDHD1 PE=1 SV=3
Length = 228
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 2 ALASNSHRATIESKISYQHGWNESFS-VIVGSD-EVRTGKPSPDIFLEAAKRLNMEPS-- 57
ALA++S A+ + K S + FS +++G D EV+ GKP PDIFL AKR + P+
Sbjct: 110 ALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAME 169
Query: 58 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 116
LV ED+ GV A AAGM+VV VP T A V+NSL D +PE +GLP ++
Sbjct: 170 KCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 228
>sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila
melanogaster GN=Gs1l PE=2 SV=2
Length = 231
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 11/124 (8%)
Query: 2 ALASNSHRATIESKISYQHGWNESFSV----IVGSD--EVRTGKPSPDIFLEAAKRLNM- 54
LA++S +E K + QH E FS+ + GS EV GKP+PDIFL AA R +
Sbjct: 111 CLATSSGADMVELKTA-QH--RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVP 167
Query: 55 -EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLP 113
+PS LV EDS GV A +AGM+VV VP + + A +V+ SL D +PE++GLP
Sbjct: 168 PKPSDCLVFEDSPNGVTAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGLP 227
Query: 114 PFQD 117
F D
Sbjct: 228 AFTD 231
>sp|Q9D5U5|HDHD1_MOUSE Pseudouridine-5'-monophosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1
Length = 234
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 1 MALASNSHRATIESKISYQHGWNESFS-VIVGSD-EVRTGKPSPDIFLEAAKRLNM--EP 56
ALA++S T ++K S G+ F +++G D EV+ GKP DIFL AKR + +P
Sbjct: 114 FALATSSETVTFQTKTSRHTGFFGLFHHIVLGDDPEVKNGKPGMDIFLTCAKRFSPPPDP 173
Query: 57 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 116
LV EDS GV A GM+VV VP A V++SL D +PE +GLP F
Sbjct: 174 KDCLVFEDSPNGVEAAIHCGMQVVMVPHENLSADLTRKATLVLSSLHDFKPELFGLPAFT 233
Query: 117 D 117
+
Sbjct: 234 E 234
>sp|Q59263|RIBF_CORAM Riboflavin biosynthesis protein RibF OS=Corynebacterium
ammoniagenes GN=ribF PE=1 SV=1
Length = 338
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 128 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGW-----------AGLS 176
+Y+ GPVV+G GRG K LG PTAN + + D ++ GVY GW +
Sbjct: 187 FYVTGPVVRGAGRGGKELGFPTAN---QYFHDTVALPADGVYAGWLTILPTEAPVSGNME 243
Query: 177 TRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLET 236
Y +S+G NP F + ++++E ++L D D Y ++ + V ++R F S+E
Sbjct: 244 PEVAYAAAISVGTNPTFGDEQRSVESFVLDR-DADLYGHDVKVEFVDHVRAMEKFDSVEQ 302
Query: 237 LIAKIHED 244
L+ + +D
Sbjct: 303 LLEVMAKD 310
>sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1
Length = 227
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 1 MALASNSHRATIESKI--SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 58
+A+A+ + RA +++ I ++ + F VI DEV KP+PD++L A + L + P++
Sbjct: 112 LAIATTTTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAA 171
Query: 59 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD 96
L EDS G+ + +AAG+ VV PS + ++AAD
Sbjct: 172 CLAFEDSRAGLASARAAGLRVVLTPSEYTRGDDFSAAD 209
>sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain
K12) GN=yqaB PE=1 SV=1
Length = 188
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
MA+ + S A E+ +++ G F +V +D V+ KP+PD FL A+R+ ++P+ +
Sbjct: 105 MAVGTGSESAIAEALLAHL-GLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCV 163
Query: 61 VIEDSVIGVVAGKAAGMEVVAVPSL 85
V ED+ G+ A +AAGM+ V V L
Sbjct: 164 VFEDADFGIQAARAAGMDAVDVRLL 188
>sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1
Length = 230
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 1 MALASNSHRATIES--KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 58
+A+A+ + +E+ + + H E F VI D V KPSPDI+ A + L++ P
Sbjct: 111 LAVATTTSLPNVEALCRACFGHPAREIFDVIAAGDMVAEKKPSPDIYRLALRELDVPPER 170
Query: 59 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
++ +EDS+ G+ A K AG+ + P + + AD +++S +L
Sbjct: 171 AVALEDSLNGLRAAKGAGLRCIVSPGFYTRHEEFAGADRLLDSFAEL 217
>sp|P73651|RIBF_SYNY3 Riboflavin biosynthesis protein RibF OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ribF PE=3 SV=1
Length = 284
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 123 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGV-Y 181
L P+ + G VV+G G K LG PTANL +D L GVY GW L+ V
Sbjct: 152 LLGRPYALRGTVVQGQQLGRK-LGFPTANLCLP--ADKLWPK-YGVYAGWVNLNALDVPI 207
Query: 182 KMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKI 241
V+++G P + E + E LL ++ D Y + L + + Y+RPE F L+ L +I
Sbjct: 208 PAVINLGDRPTVNGQEPSAEVHLL-QWSGDLYGQGLEVALTHYLRPETKFAGLDQLKNQI 266
Query: 242 HEDRKVAERALDL 254
+D + AE+ L+L
Sbjct: 267 AQDCQQAEKLLNL 279
>sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168)
GN=yhcW PE=3 SV=1
Length = 220
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 19 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 78
Q G + F VI +D+V KP+P+++L AAK L + P+ L EDSV G +A K AGM+
Sbjct: 121 QIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAKRAGMK 180
Query: 79 VVAVPSLPKQTHRYTAADEVINSLLDL 105
V VP+ T + D + S+ ++
Sbjct: 181 CVIVPNKVTGTLMFEDYDHRLESMAEM 207
>sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1
Length = 200
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
+AL S SHR I+ + + F+ IV +D+V+ KP P+ FL A+ + PS +
Sbjct: 111 IALGSGSHRKIIDMLMD-KLAIAPYFNAIVSADDVKEHKPHPETFLRCAELIQANPSRCI 169
Query: 61 VIEDSVIGVVAGKAAGMEVVAV 82
V ED+ +GV AG +AGM+V V
Sbjct: 170 VFEDADLGVQAGLSAGMDVFDV 191
>sp|P77247|YNIC_ECOLI 2-deoxyglucose-6-phosphate phosphatase OS=Escherichia coli (strain
K12) GN=yniC PE=1 SV=1
Length = 222
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 3 LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 62
LAS S +E K+ +SF + ++++ KP P ++L+ A +L ++P + + +
Sbjct: 113 LASASPLHMLE-KVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 171
Query: 63 EDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDL 105
EDSV G++A KAA M + VP+ Q R+ AD ++SL +L
Sbjct: 172 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLADVKLSSLTEL 215
>sp|P94465|RIBR_BACSU Regulatory protein RibR OS=Bacillus subtilis (strain 168) GN=ribR
PE=4 SV=1
Length = 230
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 130 IGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGW 189
I G VVKG G K LG PTAN+ + + +GVY G + VM+IG
Sbjct: 4 IAGTVVKGKQLGRK-LGFPTANVDAK-----IHGLRNGVY-GVLATVNHQFHLGVMNIGV 56
Query: 190 NPYF-DNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVA 248
P N EKT+E +L +F D Y E++ I+ IR E F SLE+L +I +D
Sbjct: 57 KPTVGSNLEKTLEIFLF-DFHRDIYGEKIECSILFKIREERRFDSLESLTKQIKKDISCV 115
Query: 249 ERALDL 254
+ +L
Sbjct: 116 AKRFEL 121
>sp|Q7ADF8|YNIC_ECO57 2-deoxyglucose-6-phosphate phosphatase OS=Escherichia coli O157:H7
GN=yniC PE=3 SV=1
Length = 222
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 3 LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 62
LAS S +E K+ +SF + ++++ KP P ++L+ A +L ++P + + +
Sbjct: 113 LASASPLHMLE-KVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 171
Query: 63 EDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDL 105
EDSV G++A KAA M + VP+ Q R+ A+ ++SL +L
Sbjct: 172 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 215
>sp|Q7NBZ0|MNMA_MYCGA Trifunctional protein RibF/MnmA OS=Mycoplasma gallisepticum (strain
R(low / passage 15 / clone 2)) GN=ribF/mnmA PE=3 SV=1
Length = 657
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 76 GMEVVAVPSLPKQTHRYTAADE--VINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGP 133
G EVV V K+ H T+ + +IN LD + K L PF Y+ G
Sbjct: 127 GYEVVVV----KKDHCSTSEIKKLIINCDLD-QANKLLLTPF-------------YLKGT 168
Query: 134 VVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYF 193
V+K RG + +G TAN+ + + L E G Y + + Y+ + IG F
Sbjct: 169 VIKNAQRG-RTIGFVTANIILD---NQLIELTEGSYVCKVIVDNK-TYQGICFIGKPKTF 223
Query: 194 DNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVA 248
D ++ E + +FD+D Y +++ + + +IRP F S+ L I D+K A
Sbjct: 224 DEKQRQCEAHIF-DFDQDIYGKKIKVELYQFIRPTVKFNSINELKEAIENDKKAA 277
>sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1
Length = 254
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 1 MALASNSHRATIESKISYQHG--WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 58
+A+A+ + A +++ + G W F+ I + KP+PD++L +RL +E
Sbjct: 115 LAIATTTTPANLDALLQAHLGADWRGRFAAICDAGTTAIKKPAPDVYLAVLERLGLEAGD 174
Query: 59 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
L IEDS G+ A +AAG+ V P+ ++A D +LL L
Sbjct: 175 CLAIEDSGNGLRAARAAGIPTVVTPT------TFSAQDSFEGALLVL 215
>sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=TM_1254 PE=1 SV=1
Length = 216
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 1 MALASNS-HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 59
+ALA+++ R +E + + F V+V D+V+ GKP P+I+L +RLN+ P
Sbjct: 103 LALATSTPQREALER--LRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKV 160
Query: 60 LVIEDSVIGVVAGKAAGMEVV 80
+V EDS GV A K+AG+E +
Sbjct: 161 VVFEDSKSGVEAAKSAGIERI 181
>sp|O59760|YJM7_SCHPO Putative uncharacterized hydrolase C1020.07 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1020.07 PE=3 SV=1
Length = 236
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 29/129 (22%)
Query: 1 MALASNSHRATIESKISYQHGWNESF--SVIVGSDE---VRTGKPSPDIFLEAAKRLN-- 53
+ALA++S E K ++ + F ++I G D V GKP PDI+ A K +N
Sbjct: 105 IALATSSDTHNFEKKSAHLSHLFDHFDGNIITGDDPRLPVGRGKPHPDIWFIALKMINDK 164
Query: 54 --------MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL---------PKQTHRYTAAD 96
+ P + LV EDS+ GV +G+AAGM+VV VP + P+Q AAD
Sbjct: 165 RKAQGQAEILPENCLVFEDSITGVQSGRAAGMKVVWVPDVNILPFFSLSPEQ-----AAD 219
Query: 97 EVINSLLDL 105
+ I +L L
Sbjct: 220 KHITKVLSL 228
>sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM
PE=1 SV=1
Length = 226
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60
+ LAS+S A KI + + F IV + GKP PDIFL AA L++ P+
Sbjct: 110 IGLASSSRNA---PKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCA 166
Query: 61 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 108
IED+ G+ A K+AGM V V Q AD V+ DL E
Sbjct: 167 AIEDAEAGISAIKSAGMFAVGV----GQGQPMLGADLVVRQTSDLTLE 210
>sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3
Length = 254
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 1 MALASNSHRATIESKISYQHG--WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 58
+A+A+ + A +++ + G W F+ I + KP+PD++L +RL +E
Sbjct: 115 LAIATTTTPANLDALLQAPLGADWRRRFAAIGDAGTTAIKKPAPDVYLAVLERLGLEGGD 174
Query: 59 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105
L IEDS G+ A +AAG+ V P+ ++A D +LL L
Sbjct: 175 CLAIEDSANGLRAARAAGIPTVVTPT------AFSAQDSFEGALLVL 215
>sp|Q4FPT7|GPH_PSYA2 Phosphoglycolate phosphatase OS=Psychrobacter arcticus (strain DSM
17307 / 273-4) GN=Psyc_2124 PE=3 SV=1
Length = 230
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 15 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 74
KI GW++ FS ++G D + T KP P L + LN+ P+ +++I DS+ ++AG+
Sbjct: 126 KILQFFGWHDIFSEVLGGDSLPTKKPDPAPLLHVCEVLNINPAQAVMIGDSINDILAGQN 185
Query: 75 AGMEVVAV 82
A M+ + +
Sbjct: 186 ANMDTLGL 193
>sp|P77625|YFBT_ECOLI Sugar phosphatase YfbT OS=Escherichia coli (strain K12) GN=yfbT
PE=1 SV=2
Length = 216
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 28 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 87
V V ++ V+ GKP PD +L A+ L + P +V+ED+ GV++G AAG V+AV + P
Sbjct: 127 VFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV-NAPA 185
Query: 88 QTHRYTAADEVINSL 102
T R D V++SL
Sbjct: 186 DTPRLNEVDLVLHSL 200
>sp|Q86ZR7|YKD3A_YEAST Putative uncharacterized hydrolase YKL033W-A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YKL033W-A
PE=1 SV=2
Length = 236
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFLEAAKRLN--- 53
+AL ++S++ K S+ + F IV D+ R GKP PDI+ K LN
Sbjct: 109 IALCTSSNKTKFRGKTSHLEEGFDLFDTIVTGDDPRIAKGRGKPFPDIWQLGLKELNEKF 168
Query: 54 ---MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS------LPKQTHRYTAADEVINSLLD 104
++P +V ED + GV + KA G V+ VP L E+++SL
Sbjct: 169 HTDIKPDECIVFEDGIPGVKSAKAFGAHVIWVPHPEAHAVLGDTEALLAGKGELLSSLEK 228
Query: 105 LRPEKWGL 112
L K+GL
Sbjct: 229 LEMSKYGL 236
>sp|Q8K9Z1|RIBF_BUCAP Riboflavin biosynthesis protein RibF OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=ribF PE=3 SV=1
Length = 312
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 45/265 (16%)
Query: 10 ATIESKISYQHGW----------NESFSVIVGSDEVRTGKPSP---------DIFLEAAK 50
TI++KI Y W NESFS + ++ + D F +K
Sbjct: 72 TTIQNKIKYIQSWKIDIILCIKFNESFSSLSAEKFIKNILITKLNIKFIIIGDDFRFGSK 131
Query: 51 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 110
R + SL+ E G +V+ + SL + ++ + LL+ + E
Sbjct: 132 R---NGNISLLKE-------IGYQYNFKVIEISSLLYKNKIKISSTNIRKCLLENKIE-- 179
Query: 111 GLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYF 170
+ L P+ I G V+ G G K LG PTAN+S + +GVY
Sbjct: 180 --------LARKLLGRPFSISGRVIHGNKIGRK-LGYPTANISLRKNIPL----NNGVYA 226
Query: 171 GWAGLSTRGVYKMVMSIGWNP-YFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEA 229
+ + +IG P YF + + + L F+ + Y+E++ + + IR E
Sbjct: 227 VKISCFFNKKFVGICNIGIKPSYFSSKKHRLLEVHLFNFNLNLYEEKIEVFLYKKIRNEC 286
Query: 230 NFPSLETLIAKIHEDRKVAERALDL 254
F S L +I +D ++ ++ +L
Sbjct: 287 FFSSKNKLKEQISKDIEIVKKYFNL 311
>sp|Q8FCW0|GPH_ECOL6 Phosphoglycolate phosphatase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=c4155 PE=3 SV=1
Length = 252
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 26 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 85
FSV++G D+V+ KP PD L A+R+ + P L + DS + A KAAG V +
Sbjct: 154 FSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGL--- 210
Query: 86 PKQTHRY--------TAADEVINSLLDLRPEKWGLP 113
T+ Y + D + SL DL P GLP
Sbjct: 211 ---TYGYNYGEAIDLSQPDVIYQSLNDLLP-ALGLP 242
>sp|Q3YWN8|GPH_SHISS Phosphoglycolate phosphatase OS=Shigella sonnei (strain Ss046)
GN=SSON_3516 PE=3 SV=1
Length = 252
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 26 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82
FSV++G D+V+ KP PD L A+R+ + P L + DS + A KAAG V +
Sbjct: 154 FSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGL 210
>sp|Q5PLX6|GPH_SALPA Phosphoglycolate phosphatase OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=SPA3347 PE=3 SV=1
Length = 252
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 26 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82
FSV++G D+V+ KP P+ L A RL M P L + DS + A KAAG V +
Sbjct: 154 FSVVIGGDDVQNKKPHPEPLLLVASRLGMTPEQMLFVGDSRNDIQAAKAAGCPSVGL 210
>sp|Q32AJ7|GPH_SHIDS Phosphoglycolate phosphatase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=SDY_3694 PE=3 SV=1
Length = 252
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 26 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82
FSV++G D+V+ KP PD L A+R+ + P L + DS + A KAAG V +
Sbjct: 154 FSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGL 210
>sp|P32662|GPH_ECOLI Phosphoglycolate phosphatase OS=Escherichia coli (strain K12)
GN=gph PE=1 SV=1
Length = 252
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 26 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82
FSV++G D+V+ KP PD L A+R+ + P L + DS + A KAAG V +
Sbjct: 154 FSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGL 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,164,536
Number of Sequences: 539616
Number of extensions: 5053284
Number of successful extensions: 9362
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 9167
Number of HSP's gapped (non-prelim): 231
length of query: 274
length of database: 191,569,459
effective HSP length: 116
effective length of query: 158
effective length of database: 128,974,003
effective search space: 20377892474
effective search space used: 20377892474
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)