Query 023972
Match_columns 274
No_of_seqs 285 out of 2655
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 08:00:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023972.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023972hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02940 riboflavin kinase 100.0 2.2E-67 4.7E-72 489.1 27.4 270 1-270 112-381 (382)
2 TIGR00083 ribF riboflavin kina 100.0 9E-53 1.9E-57 375.1 16.6 214 18-253 64-288 (288)
3 PRK05627 bifunctional riboflav 100.0 3.8E-50 8.3E-55 361.4 18.6 210 26-253 84-304 (305)
4 PF01687 Flavokinase: Riboflav 100.0 4.1E-50 9E-55 315.6 10.9 125 123-253 1-125 (125)
5 COG0196 RibF FAD synthase [Coe 100.0 3.4E-49 7.3E-54 351.9 15.1 207 27-253 87-304 (304)
6 KOG3110 Riboflavin kinase [Coe 100.0 3.1E-45 6.6E-50 281.2 12.1 148 120-267 5-152 (153)
7 PRK07143 hypothetical protein; 100.0 5.9E-39 1.3E-43 284.7 15.6 191 18-254 75-274 (279)
8 PLN02770 haloacid dehalogenase 99.6 4.3E-15 9.3E-20 130.8 10.5 106 1-107 127-233 (248)
9 PLN03243 haloacid dehalogenase 99.6 1.6E-14 3.5E-19 128.1 10.2 103 1-105 128-230 (260)
10 TIGR02253 CTE7 HAD superfamily 99.6 2.3E-14 5E-19 123.3 10.6 103 1-104 113-219 (221)
11 TIGR01422 phosphonatase phosph 99.5 2.3E-14 5E-19 126.2 9.1 86 1-87 118-205 (253)
12 PLN02575 haloacid dehalogenase 99.5 4.7E-14 1E-18 130.4 10.7 105 1-107 235-339 (381)
13 PRK09449 dUMP phosphatase; Pro 99.5 5.1E-14 1.1E-18 121.5 10.3 104 1-105 113-218 (224)
14 COG0637 Predicted phosphatase/ 99.5 1.8E-14 4E-19 124.7 7.0 84 1-85 105-188 (221)
15 TIGR01449 PGP_bact 2-phosphogl 99.5 7.2E-14 1.6E-18 119.4 10.6 104 1-105 104-209 (213)
16 TIGR01428 HAD_type_II 2-haloal 99.5 6.3E-14 1.4E-18 118.8 10.1 84 1-85 111-194 (198)
17 PRK10725 fructose-1-P/6-phosph 99.5 3.8E-14 8.1E-19 118.9 8.5 83 1-84 105-187 (188)
18 PRK10826 2-deoxyglucose-6-phos 99.5 4.5E-14 9.7E-19 121.9 9.0 104 1-105 111-215 (222)
19 TIGR02254 YjjG/YfnB HAD superf 99.5 9.2E-14 2E-18 119.4 10.5 104 1-105 115-220 (224)
20 PRK13288 pyrophosphatase PpaX; 99.5 6.8E-14 1.5E-18 120.1 9.5 104 1-105 101-206 (214)
21 COG0546 Gph Predicted phosphat 99.5 9.5E-14 2.1E-18 120.1 10.5 104 1-105 108-213 (220)
22 PRK13226 phosphoglycolate phos 99.5 1.1E-13 2.4E-18 120.3 10.1 104 1-105 114-220 (229)
23 TIGR01454 AHBA_synth_RP 3-amin 99.5 1.2E-13 2.6E-18 117.8 9.8 104 1-105 94-199 (205)
24 COG1011 Predicted hydrolase (H 99.5 1.6E-13 3.5E-18 118.3 10.2 104 1-105 117-222 (229)
25 PLN02811 hydrolase 99.5 7.8E-14 1.7E-18 120.5 8.2 107 1-107 97-208 (220)
26 PRK10563 6-phosphogluconate ph 99.5 4E-14 8.6E-19 122.0 6.1 83 1-84 104-187 (221)
27 TIGR03351 PhnX-like phosphonat 99.5 1.6E-13 3.5E-18 118.1 9.4 104 1-105 106-215 (220)
28 PRK14988 GMP/IMP nucleotidase; 99.5 2.1E-13 4.4E-18 118.4 9.4 84 1-85 112-196 (224)
29 PRK11587 putative phosphatase; 99.5 2.8E-13 6E-18 116.8 10.2 105 1-108 102-206 (218)
30 TIGR01993 Pyr-5-nucltdase pyri 99.5 2.6E-13 5.6E-18 113.7 9.4 81 1-82 100-184 (184)
31 PRK13478 phosphonoacetaldehyde 99.4 2.8E-13 6.1E-18 120.4 9.3 86 1-87 120-207 (267)
32 PRK09456 ?-D-glucose-1-phospha 99.4 6.1E-13 1.3E-17 113.0 8.6 85 1-85 103-187 (199)
33 PF13419 HAD_2: Haloacid dehal 99.4 9E-13 1.9E-17 107.8 9.3 81 1-82 96-176 (176)
34 PLN02779 haloacid dehalogenase 99.4 2E-12 4.3E-17 116.3 11.4 106 1-108 163-271 (286)
35 TIGR01509 HAD-SF-IA-v3 haloaci 99.4 1.6E-12 3.5E-17 108.0 9.7 80 1-82 104-183 (183)
36 PRK10748 flavin mononucleotide 99.4 1.6E-12 3.4E-17 113.7 9.2 99 1-105 131-234 (238)
37 PRK13223 phosphoglycolate phos 99.4 2.8E-12 6E-17 114.5 10.0 104 1-105 120-225 (272)
38 TIGR02252 DREG-2 REG-2-like, H 99.4 1.8E-12 4E-17 110.1 7.8 79 1-81 124-203 (203)
39 TIGR01990 bPGM beta-phosphoglu 99.3 2.9E-12 6.3E-17 106.9 8.3 80 1-83 106-185 (185)
40 PRK13222 phosphoglycolate phos 99.3 6.5E-12 1.4E-16 108.1 10.7 104 1-105 112-217 (226)
41 TIGR00213 GmhB_yaeD D,D-heptos 99.3 1.3E-11 2.8E-16 103.1 11.3 102 1-105 45-174 (176)
42 TIGR01493 HAD-SF-IA-v2 Haloaci 99.3 1.2E-12 2.5E-17 108.7 4.3 74 1-75 102-175 (175)
43 TIGR02009 PGMB-YQAB-SF beta-ph 99.3 4.7E-12 1E-16 105.7 7.7 79 1-82 107-185 (185)
44 TIGR02247 HAD-1A3-hyp Epoxide 99.3 4.7E-12 1E-16 108.3 7.4 83 1-84 113-197 (211)
45 PRK06769 hypothetical protein; 99.3 9.4E-12 2E-16 103.8 7.6 85 1-86 47-140 (173)
46 PLN02919 haloacid dehalogenase 99.3 2.6E-11 5.6E-16 126.0 11.1 106 1-107 180-287 (1057)
47 PRK08942 D,D-heptose 1,7-bisph 99.2 7.1E-11 1.5E-15 98.9 10.9 102 1-105 48-172 (181)
48 TIGR01548 HAD-SF-IA-hyp1 haloa 99.2 3.6E-11 7.9E-16 101.9 9.1 73 1-75 125-197 (197)
49 PRK13225 phosphoglycolate phos 99.2 4.4E-11 9.4E-16 106.9 9.8 101 1-105 161-263 (273)
50 KOG3085 Predicted hydrolase (H 99.2 9.5E-12 2.1E-16 107.7 5.2 83 1-85 132-215 (237)
51 TIGR01656 Histidinol-ppas hist 99.2 3.5E-11 7.6E-16 97.6 7.8 82 1-84 46-146 (147)
52 PRK06698 bifunctional 5'-methy 99.2 6.7E-11 1.5E-15 113.0 10.2 101 1-105 349-449 (459)
53 KOG2914 Predicted haloacid-hal 99.2 6.1E-11 1.3E-15 102.2 8.2 105 1-105 111-218 (222)
54 TIGR01261 hisB_Nterm histidino 99.2 1.4E-10 2.9E-15 95.7 9.5 82 1-85 48-149 (161)
55 TIGR01549 HAD-SF-IA-v1 haloaci 99.2 1.3E-10 2.7E-15 94.4 8.4 72 1-76 83-154 (154)
56 TIGR01685 MDP-1 magnesium-depe 99.2 7.3E-11 1.6E-15 98.4 7.0 85 1-86 64-160 (174)
57 TIGR01662 HAD-SF-IIIA HAD-supe 99.1 3.5E-10 7.5E-15 89.7 9.2 79 1-84 44-132 (132)
58 TIGR01691 enolase-ppase 2,3-di 99.1 5E-10 1.1E-14 96.9 10.4 83 1-86 114-199 (220)
59 PF13242 Hydrolase_like: HAD-h 99.1 5E-10 1.1E-14 80.4 7.6 68 37-104 2-74 (75)
60 cd02064 FAD_synthetase_N FAD s 99.0 9.5E-11 2.1E-15 98.4 2.4 99 26-137 70-180 (180)
61 TIGR01668 YqeG_hyp_ppase HAD s 98.9 2.5E-09 5.5E-14 88.9 7.1 80 1-90 62-143 (170)
62 PHA02530 pseT polynucleotide k 98.9 2.9E-09 6.3E-14 96.0 7.9 84 1-85 206-298 (300)
63 TIGR01664 DNA-3'-Pase DNA 3'-p 98.9 3.4E-09 7.4E-14 87.8 7.5 78 1-81 61-160 (166)
64 smart00577 CPDc catalytic doma 98.9 1.4E-09 3.1E-14 88.3 5.1 76 1-80 63-139 (148)
65 PHA02597 30.2 hypothetical pro 98.9 3.1E-09 6.8E-14 89.9 7.4 96 2-105 93-194 (197)
66 TIGR01452 PGP_euk phosphoglyco 98.9 5.5E-10 1.2E-14 100.0 2.2 104 1-104 161-278 (279)
67 KOG3109 Haloacid dehalogenase- 98.9 6.1E-09 1.3E-13 88.2 8.1 82 2-84 118-206 (244)
68 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.8 1.1E-09 2.4E-14 97.0 2.1 104 1-105 139-250 (257)
69 PRK05446 imidazole glycerol-ph 98.8 3.4E-08 7.3E-13 91.0 10.2 82 1-85 49-150 (354)
70 TIGR02726 phenyl_P_delta pheny 98.7 2.3E-08 4.9E-13 83.1 6.4 74 1-84 53-126 (169)
71 PLN02645 phosphoglycolate phos 98.7 2.4E-09 5.2E-14 97.4 0.5 104 1-105 189-303 (311)
72 COG2179 Predicted hydrolase of 98.7 4E-08 8.8E-13 80.0 7.1 79 1-89 65-144 (175)
73 TIGR01672 AphA HAD superfamily 98.7 1.4E-07 3.1E-12 82.4 9.4 78 1-86 133-214 (237)
74 cd01427 HAD_like Haloacid deha 98.6 1.1E-07 2.4E-12 73.9 7.7 81 1-82 43-139 (139)
75 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.6 2.6E-07 5.5E-12 77.9 8.0 83 1-84 99-191 (201)
76 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.5 3.1E-08 6.8E-13 87.3 1.9 78 26-103 165-247 (249)
77 TIGR01681 HAD-SF-IIIC HAD-supe 98.5 1.5E-07 3.4E-12 74.5 5.7 69 1-74 48-126 (128)
78 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.5 4.9E-08 1.1E-12 85.5 2.7 81 2-83 157-241 (242)
79 TIGR00338 serB phosphoserine p 98.5 5.9E-07 1.3E-11 77.0 9.3 80 1-81 104-193 (219)
80 TIGR01670 YrbI-phosphatas 3-de 98.5 2.3E-07 5.1E-12 75.8 6.1 89 1-102 47-135 (154)
81 PRK10444 UMP phosphatase; Prov 98.5 1.8E-07 4E-12 82.4 4.8 77 29-105 164-245 (248)
82 PRK09484 3-deoxy-D-manno-octul 98.4 1E-06 2.3E-11 74.0 6.8 70 1-80 67-136 (183)
83 TIGR01686 FkbH FkbH-like domai 98.3 1.6E-06 3.5E-11 79.1 7.5 72 1-78 50-125 (320)
84 PRK11009 aphA acid phosphatase 98.2 7.2E-06 1.6E-10 71.7 9.5 77 1-87 133-215 (237)
85 PLN02954 phosphoserine phospha 98.2 8E-06 1.7E-10 70.2 8.9 102 1-105 103-219 (224)
86 PRK09552 mtnX 2-hydroxy-3-keto 98.1 6.1E-06 1.3E-10 71.1 6.7 77 1-79 93-183 (219)
87 PF00702 Hydrolase: haloacid d 98.1 1E-05 2.2E-10 68.5 7.1 70 1-76 146-215 (215)
88 PRK13582 thrH phosphoserine ph 98.0 1.8E-05 3.8E-10 67.1 7.3 79 1-80 86-168 (205)
89 TIGR01663 PNK-3'Pase polynucle 98.0 1.5E-05 3.3E-10 77.1 7.3 73 1-76 216-304 (526)
90 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.9E-05 4.2E-10 65.6 7.0 74 1-78 91-184 (188)
91 COG0241 HisB Histidinol phosph 98.0 4E-05 8.8E-10 64.1 8.7 61 25-85 86-151 (181)
92 PRK11133 serB phosphoserine ph 97.9 4.2E-05 9.1E-10 70.0 8.4 80 1-81 200-289 (322)
93 TIGR03333 salvage_mtnX 2-hydro 97.9 2.6E-05 5.5E-10 67.0 6.5 76 1-77 89-177 (214)
94 TIGR01460 HAD-SF-IIA Haloacid 97.9 1.3E-05 2.9E-10 70.0 4.1 49 36-84 185-235 (236)
95 TIGR02244 HAD-IG-Ncltidse HAD 97.9 5.2E-05 1.1E-09 69.7 8.0 84 1-85 203-325 (343)
96 TIGR02251 HIF-SF_euk Dullard-l 97.7 1.4E-05 2.9E-10 66.0 1.5 79 1-83 60-139 (162)
97 PTZ00445 p36-lilke protein; Pr 97.6 0.00019 4.2E-09 61.2 7.6 73 11-84 119-206 (219)
98 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.6 0.0002 4.4E-09 60.4 7.3 82 1-83 106-198 (202)
99 TIGR01456 CECR5 HAD-superfamil 97.6 0.00015 3.2E-09 66.4 6.8 69 36-104 230-315 (321)
100 COG0647 NagD Predicted sugar p 97.5 0.0002 4.3E-09 63.7 6.0 70 36-105 187-261 (269)
101 TIGR02137 HSK-PSP phosphoserin 97.5 0.00056 1.2E-08 58.5 8.6 79 1-84 86-172 (203)
102 TIGR01544 HAD-SF-IE haloacid d 97.5 0.0004 8.6E-09 62.0 7.4 74 1-75 140-230 (277)
103 cd02169 Citrate_lyase_ligase C 97.5 3.2E-05 7E-10 69.9 0.4 75 37-124 205-289 (297)
104 KOG3040 Predicted sugar phosph 97.4 0.00016 3.5E-09 61.2 4.3 53 35-87 177-230 (262)
105 PRK08238 hypothetical protein; 97.3 0.0016 3.6E-08 62.7 9.7 77 1-85 91-167 (479)
106 TIGR01488 HAD-SF-IB Haloacid D 97.2 0.001 2.2E-08 54.7 6.9 74 1-75 92-177 (177)
107 KOG2882 p-Nitrophenyl phosphat 97.1 0.00087 1.9E-08 59.8 5.4 54 34-87 219-273 (306)
108 PF09419 PGP_phosphatase: Mito 96.9 0.0044 9.5E-08 51.3 7.9 74 1-85 80-166 (168)
109 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.9 0.001 2.3E-08 58.1 4.0 71 1-77 43-116 (242)
110 smart00764 Citrate_ly_lig Citr 96.8 0.00052 1.1E-08 57.7 1.3 71 36-109 89-169 (182)
111 TIGR01525 ATPase-IB_hvy heavy 96.7 0.004 8.6E-08 61.2 7.3 66 1-78 404-469 (556)
112 PF12689 Acid_PPase: Acid Phos 96.4 0.024 5.1E-07 47.1 8.7 80 1-85 64-153 (169)
113 TIGR01512 ATPase-IB2_Cd heavy 96.4 0.0074 1.6E-07 59.1 6.5 65 1-77 382-446 (536)
114 PF06574 FAD_syn: FAD syntheta 96.2 0.0015 3.2E-08 53.6 0.5 72 18-95 72-156 (157)
115 TIGR02463 MPGP_rel mannosyl-3- 95.7 0.046 1E-06 46.7 7.8 69 7-81 148-220 (221)
116 PRK10530 pyridoxal phosphate ( 95.7 0.023 4.9E-07 50.1 5.8 39 41-79 200-238 (272)
117 TIGR01684 viral_ppase viral ph 95.6 0.018 3.9E-07 51.8 4.6 44 1-45 165-208 (301)
118 TIGR01487 SPP-like sucrose-pho 95.2 0.051 1.1E-06 46.3 6.0 79 3-83 112-190 (215)
119 TIGR01482 SPP-subfamily Sucros 95.1 0.05 1.1E-06 46.4 5.8 48 36-83 145-192 (225)
120 PF08645 PNK3P: Polynucleotide 95.0 0.054 1.2E-06 44.4 5.6 61 18-80 78-153 (159)
121 PRK01158 phosphoglycolate phos 94.9 0.078 1.7E-06 45.4 6.6 46 37-82 154-199 (230)
122 PRK10671 copA copper exporting 94.6 0.077 1.7E-06 54.8 6.7 67 1-79 669-735 (834)
123 TIGR01511 ATPase-IB1_Cu copper 94.4 0.12 2.5E-06 51.0 7.2 65 1-78 424-488 (562)
124 COG0560 SerB Phosphoserine pho 94.4 0.16 3.5E-06 43.7 7.1 83 1-84 96-188 (212)
125 COG4229 Predicted enolase-phos 94.2 0.28 6.1E-06 41.1 7.8 81 2-85 123-206 (229)
126 PRK00192 mannosyl-3-phosphogly 94.1 0.12 2.7E-06 45.8 6.1 43 42-84 192-235 (273)
127 TIGR01485 SPP_plant-cyano sucr 93.8 0.32 6.8E-06 42.5 8.1 50 35-84 162-211 (249)
128 COG1778 Low specificity phosph 93.8 0.078 1.7E-06 43.2 3.6 74 1-84 54-127 (170)
129 TIGR02250 FCP1_euk FCP1-like p 93.7 0.11 2.5E-06 42.4 4.7 64 1-71 76-142 (156)
130 TIGR01522 ATPase-IIA2_Ca golgi 93.0 0.28 6E-06 51.1 7.3 77 1-78 547-639 (884)
131 TIGR02471 sucr_syn_bact_C sucr 92.8 0.17 3.7E-06 43.8 4.7 55 27-81 142-200 (236)
132 PF05761 5_nucleotid: 5' nucle 92.6 0.37 8E-06 46.1 6.9 85 1-85 202-326 (448)
133 TIGR01484 HAD-SF-IIB HAD-super 92.2 0.24 5.2E-06 41.6 4.7 45 36-80 159-203 (204)
134 TIGR00685 T6PP trehalose-phosp 90.6 0.41 8.9E-06 41.8 4.7 59 42-104 169-234 (244)
135 COG4087 Soluble P-type ATPase 90.3 1.3 2.9E-05 35.1 6.7 93 2-104 49-141 (152)
136 PHA03398 viral phosphatase sup 90.0 0.77 1.7E-05 41.5 5.9 35 1-36 167-201 (303)
137 PLN02645 phosphoglycolate phos 88.1 2.4 5.1E-05 38.5 7.8 71 1-81 63-136 (311)
138 TIGR01533 lipo_e_P4 5'-nucleot 87.5 2.2 4.8E-05 38.0 7.1 63 1-71 137-203 (266)
139 TIGR01658 EYA-cons_domain eyes 87.4 3.8 8.2E-05 36.0 8.1 78 3-85 180-259 (274)
140 TIGR00099 Cof-subfamily Cof su 86.5 1.3 2.7E-05 38.7 5.0 43 40-82 188-230 (256)
141 TIGR02461 osmo_MPG_phos mannos 86.3 0.91 2E-05 39.2 3.9 45 36-80 179-223 (225)
142 PRK10513 sugar phosphate phosp 85.0 1.5 3.3E-05 38.4 4.8 44 40-83 196-239 (270)
143 PRK11033 zntA zinc/cadmium/mer 85.0 3.7 8E-05 42.0 8.1 65 1-79 587-651 (741)
144 PRK10976 putative hydrolase; P 84.5 1.2 2.6E-05 39.1 3.8 42 42-83 192-233 (266)
145 PF08282 Hydrolase_3: haloacid 84.3 2.3 5E-05 36.0 5.5 41 42-82 188-228 (254)
146 PF06888 Put_Phosphatase: Puta 82.1 6.2 0.00014 34.5 7.3 75 1-76 92-189 (234)
147 PF12710 HAD: haloacid dehalog 79.9 4.7 0.0001 33.0 5.6 69 1-73 108-192 (192)
148 TIGR01486 HAD-SF-IIB-MPGP mann 79.6 3.9 8.5E-05 35.7 5.3 45 40-84 176-222 (256)
149 PRK15126 thiamin pyrimidine py 79.0 2.7 5.8E-05 37.0 4.1 43 41-83 189-231 (272)
150 COG4996 Predicted phosphatase 77.5 4.4 9.5E-05 32.3 4.3 60 4-71 63-131 (164)
151 PRK03669 mannosyl-3-phosphogly 75.6 5.2 0.00011 35.3 4.9 42 41-82 188-232 (271)
152 COG0561 Cof Predicted hydrolas 72.5 5 0.00011 35.1 4.0 45 40-84 189-233 (264)
153 KOG2961 Predicted hydrolase (H 72.5 3.8 8.1E-05 33.5 2.8 34 54-87 137-171 (190)
154 PLN02887 hydrolase family prot 71.7 5.9 0.00013 39.3 4.7 43 41-83 508-550 (580)
155 COG5610 Predicted hydrolase (H 70.2 6.4 0.00014 37.7 4.2 66 16-81 134-200 (635)
156 KOG2469 IMP-GMP specific 5'-nu 68.7 8.5 0.00018 36.2 4.7 83 2-84 218-334 (424)
157 PRK11590 hypothetical protein; 67.2 28 0.00061 29.4 7.4 79 1-81 115-201 (211)
158 PF05116 S6PP: Sucrose-6F-phos 64.6 15 0.00031 32.2 5.3 43 42-85 167-209 (247)
159 TIGR02199 rfaE_dom_II rfaE bif 64.1 22 0.00047 28.4 5.8 57 25-95 76-136 (144)
160 PF03031 NIF: NLI interacting 60.1 5.3 0.00011 32.1 1.5 65 1-69 54-119 (159)
161 KOG3120 Predicted haloacid deh 58.9 7.3 0.00016 33.8 2.2 68 1-69 104-195 (256)
162 KOG2630 Enolase-phosphatase E- 58.7 20 0.00044 31.2 4.9 56 23-84 170-225 (254)
163 TIGR01518 g3p_cytidyltrns glyc 58.3 10 0.00023 29.3 2.9 49 41-95 70-119 (125)
164 PLN02382 probable sucrose-phos 57.3 23 0.00049 33.6 5.5 43 42-84 177-222 (413)
165 PF11019 DUF2608: Protein of u 55.7 36 0.00079 29.9 6.2 46 40-85 162-211 (252)
166 COG2897 SseA Rhodanese-related 55.4 13 0.00029 33.4 3.4 48 36-83 69-122 (285)
167 TIGR01116 ATPase-IIA1_Ca sarco 55.3 32 0.00068 36.2 6.6 77 2-79 557-653 (917)
168 KOG3107 Predicted haloacid deh 53.3 57 0.0012 30.7 7.1 77 3-85 375-453 (468)
169 PF08057 Ery_res_leader2: Eryt 49.7 5.9 0.00013 18.3 0.1 8 144-151 6-13 (14)
170 PRK10187 trehalose-6-phosphate 48.3 14 0.0003 32.7 2.4 41 43-83 177-220 (266)
171 TIGR01452 PGP_euk phosphoglyco 48.3 69 0.0015 28.3 6.9 70 1-81 37-109 (279)
172 cd01445 TST_Repeats Thiosulfat 48.1 33 0.00071 27.1 4.3 45 37-81 75-127 (138)
173 cd02170 cytidylyltransferase c 47.7 14 0.0003 28.9 2.1 64 24-101 63-132 (136)
174 COG3700 AphA Acid phosphatase 47.7 40 0.00086 28.4 4.7 33 48-84 180-212 (237)
175 PRK14132 riboflavin kinase; Pr 46.7 1.2E+02 0.0027 23.8 7.2 100 129-234 2-119 (126)
176 KOG2470 Similar to IMP-GMP spe 45.7 26 0.00057 32.5 3.7 84 1-84 259-376 (510)
177 TIGR01497 kdpB K+-transporting 45.3 68 0.0015 32.6 6.9 68 2-81 466-533 (675)
178 COG3882 FkbH Predicted enzyme 45.2 1.2E+02 0.0025 29.7 8.0 70 1-76 274-347 (574)
179 cd02171 G3P_Cytidylyltransfera 43.9 14 0.00031 28.5 1.6 49 40-95 72-120 (129)
180 TIGR01545 YfhB_g-proteo haloac 43.6 1.2E+02 0.0027 25.6 7.4 79 1-81 114-200 (210)
181 PRK00234 Maf-like protein; Rev 39.3 80 0.0017 26.6 5.5 43 2-49 5-48 (192)
182 PRK14361 Maf-like protein; Pro 39.3 89 0.0019 26.2 5.8 44 1-49 1-44 (187)
183 PF08285 DPM3: Dolichol-phosph 38.8 29 0.00062 25.7 2.4 28 229-256 61-88 (91)
184 PF13344 Hydrolase_6: Haloacid 37.7 93 0.002 23.0 5.1 64 2-77 34-100 (101)
185 cd02039 cytidylyltransferase_l 34.9 51 0.0011 25.3 3.5 67 26-95 64-138 (143)
186 PRK00884 Maf-like protein; Rev 34.4 1.1E+02 0.0024 25.8 5.7 43 2-49 5-48 (194)
187 PF14819 QueF_N: Nitrile reduc 33.4 46 0.001 25.5 2.8 21 228-248 81-101 (110)
188 PF00567 TUDOR: Tudor domain; 32.2 1E+02 0.0022 22.6 4.6 42 166-220 55-96 (121)
189 PRK00148 Maf-like protein; Rev 31.5 1.3E+02 0.0029 25.3 5.7 43 2-49 4-47 (194)
190 PRK04694 Maf-like protein; Rev 31.5 1.3E+02 0.0029 25.2 5.6 43 2-49 3-46 (190)
191 PRK00648 Maf-like protein; Rev 31.1 1.6E+02 0.0035 24.8 6.0 43 2-49 6-50 (191)
192 PRK14010 potassium-transportin 30.1 1.8E+02 0.004 29.6 7.2 66 2-79 461-526 (673)
193 PF03622 IBV_3B: IBV 3B protei 29.3 65 0.0014 21.8 2.6 38 233-270 10-52 (64)
194 PF02350 Epimerase_2: UDP-N-ac 29.1 1.5E+02 0.0031 27.3 6.0 80 2-85 13-100 (346)
195 COG2217 ZntA Cation transport 28.8 1.5E+02 0.0032 30.4 6.3 63 2-76 557-619 (713)
196 TIGR00236 wecB UDP-N-acetylglu 28.4 1.7E+02 0.0036 26.6 6.3 81 2-85 33-119 (365)
197 PRK00032 Maf-like protein; Rev 28.1 1.6E+02 0.0035 24.7 5.6 43 2-49 5-48 (190)
198 COG0424 Maf Nucleotide-binding 27.5 1.9E+02 0.0042 24.4 5.9 44 1-49 5-49 (193)
199 PRK14366 Maf-like protein; Pro 27.3 1.8E+02 0.0039 24.6 5.7 45 1-49 7-52 (195)
200 cd03123 alpha_CA_VI_IX_XII_XIV 27.3 65 0.0014 28.2 3.1 61 181-243 84-156 (248)
201 COG2904 Uncharacterized protei 26.7 58 0.0013 25.5 2.3 21 228-248 101-121 (137)
202 PRK14362 Maf-like protein; Pro 26.7 1.6E+02 0.0035 25.1 5.4 43 2-49 15-59 (207)
203 PLN02723 3-mercaptopyruvate su 26.2 1.3E+02 0.0028 27.3 5.0 49 36-84 82-136 (320)
204 TIGR00172 maf MAF protein. Thi 26.0 2.4E+02 0.0052 23.5 6.2 60 1-65 5-71 (183)
205 PRK14368 Maf-like protein; Pro 25.1 2.5E+02 0.0055 23.6 6.2 43 2-49 8-51 (193)
206 PRK04425 Maf-like protein; Rev 24.7 2E+02 0.0044 24.3 5.6 43 2-49 8-51 (196)
207 PLN02423 phosphomannomutase 24.5 96 0.0021 26.9 3.7 35 49-84 194-232 (245)
208 PRK01122 potassium-transportin 24.5 2.2E+02 0.0048 29.0 6.7 66 2-79 465-530 (679)
209 PRK01526 Maf-like protein; Rev 24.2 1.8E+02 0.0039 24.8 5.2 43 2-49 11-55 (205)
210 KOG1615 Phosphoserine phosphat 24.2 1.8E+02 0.0039 25.0 5.0 71 1-74 107-191 (227)
211 PRK14502 bifunctional mannosyl 24.1 1.6E+02 0.0035 30.0 5.5 42 42-83 615-658 (694)
212 COG4359 Uncharacterized conser 24.0 1E+02 0.0022 26.2 3.5 68 2-76 93-179 (220)
213 PRK01839 Maf-like protein; Rev 24.0 2.1E+02 0.0045 24.5 5.6 43 2-49 13-62 (209)
214 PF14871 GHL6: Hypothetical gl 23.9 1.9E+02 0.0042 22.7 5.0 17 69-85 50-66 (132)
215 PRK02141 Maf-like protein; Rev 23.6 3.1E+02 0.0067 23.4 6.5 43 2-49 12-55 (207)
216 PRK01441 Maf-like protein; Rev 23.5 2.3E+02 0.005 24.1 5.8 43 2-49 8-52 (207)
217 KOG0207 Cation transport ATPas 23.3 2E+02 0.0043 30.3 6.0 45 37-84 723-769 (951)
218 PF13580 SIS_2: SIS domain; PD 23.2 1.7E+02 0.0037 22.8 4.6 36 48-83 95-137 (138)
219 PF14056 DUF4250: Domain of un 22.2 40 0.00087 22.5 0.6 32 224-257 15-46 (55)
220 PRK04056 Maf-like protein; Rev 22.2 3E+02 0.0064 22.9 6.0 43 2-49 3-46 (180)
221 TIGR01675 plant-AP plant acid 21.7 4.2E+02 0.009 23.0 7.0 76 1-83 139-222 (229)
222 COG1184 GCD2 Translation initi 21.5 6.2E+02 0.014 23.0 8.9 80 2-84 122-229 (301)
223 TIGR01647 ATPase-IIIA_H plasma 21.4 1.7E+02 0.0037 30.1 5.3 75 2-80 462-558 (755)
224 cd03126 alpha_CA_XII_XIV Carbo 20.7 1.9E+02 0.0041 25.3 4.8 54 187-243 91-154 (249)
225 PF07624 PSD2: Protein of unkn 20.7 1.1E+02 0.0025 21.4 2.8 26 228-253 3-28 (76)
226 PRK02478 Maf-like protein; Rev 20.4 2.7E+02 0.0059 23.5 5.6 44 1-49 5-55 (199)
227 PRK14010 potassium-transportin 20.1 1.5E+02 0.0033 30.1 4.6 40 37-79 441-482 (673)
No 1
>PLN02940 riboflavin kinase
Probab=100.00 E-value=2.2e-67 Score=489.09 Aligned_cols=270 Identities=84% Similarity=1.376 Sum_probs=245.7
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+++..+...+.++.|+.++||.+++++++..+||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus 112 l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 112 MALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred EEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 58999999999887774378999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccccccccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCC
Q 023972 81 AVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDV 160 (274)
Q Consensus 81 ~V~~~~~~~~~iSss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~ 160 (274)
++.++.........++.++.++.++....+++|++++|+.+.||+|||+++|+|+||+++||+.||||||||.++...++
T Consensus 192 ~v~~g~~~~~~~~~ad~~i~sl~el~~~~~~~~~~~~~~~~~~~~~~y~~~G~Vv~G~~~G~~~lg~PTaNl~~~~~~~~ 271 (382)
T PLN02940 192 AVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIGGPVIKGFGRGSKVLGIPTANLSTENYSDV 271 (382)
T ss_pred EECCCCcchhhccCccEEeCCHhHcCHHHcCCCCccccccCcCCcCCEEEEEEEEeCCccCcccCCCCcccCCcchhhhh
Confidence 99886443334456778999999988888899999999999999999999999999999998548999999998764346
Q ss_pred CCCCCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHH
Q 023972 161 LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAK 240 (274)
Q Consensus 161 ~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~q 240 (274)
+|.|+.|||++|+.++++.+|+||+|||+||||++.+.++|||||+||++||||++|+|+|++|||+|+||+|+|+|++|
T Consensus 272 ~~~p~~GVY~~~~~~~~~~~~~~v~niG~~Pt~~~~~~~~E~~i~~df~~dlyg~~i~v~~~~~lR~e~kF~~~~~L~~q 351 (382)
T PLN02940 272 LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTIEPWLLHDFGEDFYGEELRLVIVGYIRPEANFPSLESLIAK 351 (382)
T ss_pred cCCCCCEEEEEEEEECCCceEEEEEEecCCCccCCCccEEEEEEeCCCCCCCCCCeEEEEEehhcCCCCCCCCHHHHHHH
Confidence 76445999999999975468999999999999987777899999955999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCccccCCCCCCCCcccc
Q 023972 241 IHEDRKVAERALDLPLYSKYRDDPYLKITS 270 (274)
Q Consensus 241 i~~D~~~a~~~~~~~~~~~~~~~~~~~~~~ 270 (274)
|++|++.||++|+.|.|+.|++|.||+++.
T Consensus 352 i~~D~~~a~~~~~~~~~~~~~~~~~~~~~~ 381 (382)
T PLN02940 352 IHEDRRIAEKALDLPLYAKYKDDPYLTNSL 381 (382)
T ss_pred HHHHHHHHHHHHcCchhhhhccChhhccCC
Confidence 999999999999999999999999999874
No 2
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=100.00 E-value=9e-53 Score=375.09 Aligned_cols=214 Identities=24% Similarity=0.327 Sum_probs=180.8
Q ss_pred HHcCCCCCCcEEEecC-CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh----------HHHHHHcCCEEEEecCCC
Q 023972 18 YQHGWNESFSVIVGSD-EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG----------VVAGKAAGMEVVAVPSLP 86 (274)
Q Consensus 18 ~~~gl~~~Fd~v~~~~-~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d----------i~aA~~aGi~vi~V~~~~ 86 (274)
+.+|+ |.++.-. +...++.+|+.|++-+..-.++++.++++.|++|| .+.+++.|+.++.++...
T Consensus 64 ~~~Gv----d~~~~~~F~~~~a~ls~e~Fi~~~l~~~l~~~~ivvG~Df~FG~~~~G~~~~L~~~~~~~g~~v~~~~~~~ 139 (288)
T TIGR00083 64 QIKGV----EQLLVVVFDEEFANLSALQFIDQLIVKHLHVKFLVVGDDFRFGHDRQGDFLLLQLFGNTTIFCVIVKQLFC 139 (288)
T ss_pred HHcCC----CEEEEeCCCHHHHcCCHHHHHHHHHHhccCCcEEEECCCccCCCCCCCCHHHHHHhccccCcEEEEecccc
Confidence 55565 5544433 33567899999997432222344788888999997 344678899999998876
Q ss_pred CcccccccccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCC
Q 023972 87 KQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPS 166 (274)
Q Consensus 87 ~~~~~iSss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~ 166 (274)
.+ ..+||+ .|++.+.++++.. |++||||||+++|+|+||+++|| +||||||||.+++. .++|+ .
T Consensus 140 ~~-~~ISST-~IR~~l~~G~i~~----------A~~lLGr~y~i~G~Vv~G~~~Gr-~lGfPTaNl~~~~~-~~~p~--~ 203 (288)
T TIGR00083 140 QD-IRISSS-AIRQALKNGDLEL----------ANKLLGRPYFICGTVIHGQKLGR-TLGFPTANIKLKNQ-VLPLK--G 203 (288)
T ss_pred CC-CeECHH-HHHHHHHcCCHHH----------HHHhhhhhhccceEEEecCCCcc-cccCceEEecCccc-ccCCC--c
Confidence 66 778885 7777888899987 99999999999999999999997 79999999998774 56665 8
Q ss_pred ceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHH
Q 023972 167 GVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 246 (274)
Q Consensus 167 GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~ 246 (274)
|||++++.++ +.+|+||+|||.||||++.+..+|||||| |++||||++|+|+|++|||+|+||+|+|+|++||++|++
T Consensus 204 GVYa~~v~i~-~~~y~~v~niG~~PT~~~~~~~~E~~ild-f~~dlYg~~i~v~f~~~iR~e~kF~s~~~L~~qI~~D~~ 281 (288)
T TIGR00083 204 GYYVVVVLLN-GEPYPGVGNIGNRPTFIGQQLVIEVHLLD-FSGELYGQEIKVTLVKKIRPEQKFSSLDELKNQIQQDIL 281 (288)
T ss_pred ceEEEEEEeC-CeEEEEEEEeCCCCccCCCceEEEEEeCC-CCcccCCCEEEEEeHHhccCCCCcCCHHHHHHHHHHHHH
Confidence 9999999986 48899999999999998766789999996 999999999999999999999999999999999999999
Q ss_pred HHHHHcC
Q 023972 247 VAERALD 253 (274)
Q Consensus 247 ~a~~~~~ 253 (274)
.||++|+
T Consensus 282 ~ar~~~~ 288 (288)
T TIGR00083 282 QAKKWFN 288 (288)
T ss_pred HHHHHhC
Confidence 9999874
No 3
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Probab=100.00 E-value=3.8e-50 Score=361.39 Aligned_cols=210 Identities=29% Similarity=0.387 Sum_probs=178.6
Q ss_pred CcEEEec-CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh----------HHHHHHcCCEEEEecCCCCccccccc
Q 023972 26 FSVIVGS-DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG----------VVAGKAAGMEVVAVPSLPKQTHRYTA 94 (274)
Q Consensus 26 Fd~v~~~-~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d----------i~aA~~aGi~vi~V~~~~~~~~~iSs 94 (274)
+|.++.. .+-..++.+|+.|++.+..-.++++.++++.|+.|| .+.+++.|+.++.++....++..+||
T Consensus 84 VD~~~~~~F~~~~~~ls~e~Fi~~~l~~~l~~~~iVvG~Df~FG~~~~G~~~~L~~~~~~~g~~v~~v~~~~~~~~~ISS 163 (305)
T PRK05627 84 VDYVLVLPFDEEFAKLSAEEFIEDLLVKGLNAKHVVVGFDFRFGKKRAGDFELLKEAGKEFGFEVTIVPEVKEDGERVSS 163 (305)
T ss_pred CCEEEEecCCHHHhcCCHHHHHHHHHHhccCCCEEEECCCCCCCCCCCCCHHHHHHHHHHcCcEEEEeccEecCCCcCch
Confidence 5655542 233467889999998432223355788888999886 23367789999999887777778888
Q ss_pred ccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEE
Q 023972 95 ADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAG 174 (274)
Q Consensus 95 s~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~ 174 (274)
+ .|++.+.++++.. |++||||||+++|+|+||+++|| +||||||||.+++. . +|+ .|||++|+.
T Consensus 164 T-~IR~~I~~G~i~~----------A~~lLg~~y~~~g~V~~G~~~Gr-~lgfPTaNl~~~~~-~-~p~--~GVY~~~~~ 227 (305)
T PRK05627 164 T-AIRQALAEGDLEL----------ANKLLGRPYSISGRVVHGQKLGR-TLGFPTANLPLPDR-V-LPA--DGVYAVRVK 227 (305)
T ss_pred H-HHHHHHHcCCHHH----------HHhhhcCCCceEEEEEECcccCc-cccceeEeecCccC-C-CCC--ceEEEEEEE
Confidence 6 7778888899987 99999999999999999999996 79999999998774 3 464 899999999
Q ss_pred EcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 023972 175 LSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 253 (274)
Q Consensus 175 ~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~ 253 (274)
+++ .+|+||+|||+||||++.+.++|+|||| |++|+||++|+|+|++|||+|+||+|+|||++||++|++.||++|.
T Consensus 228 i~~-~~y~~~~~iG~~ptf~~~~~~~E~~i~d-f~~d~Yg~~i~v~~~~~iR~e~kF~s~~~L~~~i~~D~~~a~~~~~ 304 (305)
T PRK05627 228 VDG-KPYPGVANIGTRPTVDGGRQLLEVHLLD-FNGDLYGEHITVEFLKKLRDEQKFDSLDELKAQIAKDIETARAFLA 304 (305)
T ss_pred ECC-EEEEEEEEecCCCccCCCceEEEEEecC-CCCccCCCEEEEEEhhhcCCCCCcCCHHHHHHHHHHHHHHHHHHhh
Confidence 974 8999999999999998767789999995 9999999999999999999999999999999999999999999985
No 4
>PF01687 Flavokinase: Riboflavin kinase; InterPro: IPR015865 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents the riboflavin kinase domains from bacteria and eukaryotes.; GO: 0008531 riboflavin kinase activity, 0009231 riboflavin biosynthetic process; PDB: 1Q9S_A 1NB9_A 1P4M_A 1NB0_A 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A ....
Probab=100.00 E-value=4.1e-50 Score=315.56 Aligned_cols=125 Identities=39% Similarity=0.713 Sum_probs=110.0
Q ss_pred CCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeee
Q 023972 123 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEP 202 (274)
Q Consensus 123 lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~ 202 (274)
||||||+++|+|+||+++|| +||||||||.++.. .++|+ .|||++|+.+++ .+|+||+|||+||||++.+.++||
T Consensus 1 LLG~py~i~G~Vv~G~~~Gr-~lGfPTANl~~~~~-~~~p~--~GVYa~~v~~~~-~~~~~v~niG~~PTf~~~~~~vE~ 75 (125)
T PF01687_consen 1 LLGRPYSISGTVVHGFGRGR-KLGFPTANLDIPDD-KLLPK--EGVYAVWVRVDG-KWYPGVTNIGYRPTFDGKERTVEV 75 (125)
T ss_dssp HHTSSEEEEEEEEC-SSCCC-CTTS-EEEEEEHCC-CTCCC--TEEEEEEEEETS-EEEEEEEEEEEETTTSSCEEEEEE
T ss_pred CcCCCEEEEEEEEeCCcccc-ccCCccccccCCcc-ccccc--CEEEEEEEEECC-EEEEeEEEecCCCccCcCceeEEE
Confidence 58999999999999999996 79999999998553 67886 799999999974 899999999999999988899999
Q ss_pred eEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 023972 203 WLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 253 (274)
Q Consensus 203 ~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~ 253 (274)
|||| |++||||++|+|+|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus 76 hild-f~~dlYg~~i~v~~~~~lR~e~kF~s~e~L~~qI~~D~~~a~~~lq 125 (125)
T PF01687_consen 76 HILD-FDGDLYGKKIKVEFLKFLRPEKKFDSLEELKEQIKKDIEQARKYLQ 125 (125)
T ss_dssp EETT-SSSE-TTSEEEEEEEEEEEE----SSHHHHHHHHHHHHHHHHHHH-
T ss_pred EEec-cCcccCCCeEEEEEEeCccCCcccCCHHHHHHHHHHHHHHHHHhcC
Confidence 9995 9999999999999999999999999999999999999999999984
No 5
>COG0196 RibF FAD synthase [Coenzyme metabolism]
Probab=100.00 E-value=3.4e-49 Score=351.87 Aligned_cols=207 Identities=29% Similarity=0.451 Sum_probs=179.5
Q ss_pred cEEEec-CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhH----------HHHHHcCCEEEEecCCCCcccccccc
Q 023972 27 SVIVGS-DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV----------VAGKAAGMEVVAVPSLPKQTHRYTAA 95 (274)
Q Consensus 27 d~v~~~-~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di----------~aA~~aGi~vi~V~~~~~~~~~iSss 95 (274)
|.++.- .+...++.+|+.|+. +..-.+.++.++++.|+.||. ..+.+ |+.++.++....++.++||+
T Consensus 87 d~~~v~~F~~~fa~ls~~~Fv~-~lv~~l~~k~ivvG~DF~FGk~~~g~~~~L~~~~~~-gf~v~~v~~~~~~~~~iSSt 164 (304)
T COG0196 87 DALVVLDFDLEFANLSAEEFVE-LLVEKLNVKHIVVGFDFRFGKGRQGNAELLRELGQK-GFEVTIVPKINEEGIRISST 164 (304)
T ss_pred cEEEEEeCCHhHhhCCHHHHHH-HHHhccCCcEEEEecccccCCCCCCCHHHHHHhccC-CceEEEeccEecCCcEEchH
Confidence 554443 455688999999999 333344557899999999872 23455 89999999988888889986
Q ss_pred cEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEEE
Q 023972 96 DEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGL 175 (274)
Q Consensus 96 ~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~~ 175 (274)
.|++.+.++++.. |+.+|||||+++|+|+||.++|| +||||||||.++.. .+| +.|||++++.+
T Consensus 165 -~IR~~L~~gdl~~----------A~~lLG~py~i~G~Vv~G~~~Gr-~lGfPTaNi~~~~~--~~~--~~GVYav~v~~ 228 (304)
T COG0196 165 -AIRQALREGDLEE----------ANKLLGRPYSIEGKVVHGQKLGR-TLGFPTANIYLKDN--VLP--AFGVYAVRVKL 228 (304)
T ss_pred -HHHHHHhcCCHHH----------HHHhcCCCeEEEEEEEccccccc-ccCCCccccccccc--ccc--CCeeEEEEEEE
Confidence 7788888899987 99999999999999999999996 79999999998774 455 38999999999
Q ss_pred cCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 023972 176 STRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALD 253 (274)
Q Consensus 176 ~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~ 253 (274)
.+ ..|+||+|||+|||+++....+|+|||| |++|+||+.++|.|++|||+|+||+|+|+|++||++|++.||++|+
T Consensus 229 ~~-~~~~gv~~vG~rpt~~~~~~~lEvhi~D-f~~dlYG~~i~v~~~~~iR~e~kF~s~d~L~~qi~~D~~~Ar~~~~ 304 (304)
T COG0196 229 DG-GVYPGVANVGYRPTVDGSERSLEVHILD-FNGDLYGERVKVRFLKFIRDEKKFDSLDELKEQIEKDIERARKLLA 304 (304)
T ss_pred CC-ccccceEEecccccccCCeeEEEEEEec-ccccccCceEEEEEhhhcccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 75 4499999999999999888899999996 9999999999999999999999999999999999999999999984
No 6
>KOG3110 consensus Riboflavin kinase [Coenzyme transport and metabolism]
Probab=100.00 E-value=3.1e-45 Score=281.18 Aligned_cols=148 Identities=54% Similarity=1.020 Sum_probs=136.8
Q ss_pred cCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEEEEEEEcCCeEEEEEEEecCCCeecCCCce
Q 023972 120 EGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT 199 (274)
Q Consensus 120 a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~ 199 (274)
++.+.-.||.+.|.||+|++||+++||+||||+.....+.++-....|||.+|+.++.+.+|++++||||||.+++++.+
T Consensus 5 ~~~~~~~P~~~~g~VVrGFGRGskeLGiPTAN~~~~~v~~l~~~l~~GvYfG~A~v~~~~v~kMvmSIGwNP~Y~N~~Kt 84 (153)
T KOG3110|consen 5 AQPMSPLPLFFGGEVVRGFGRGSKELGIPTANFPENVVPKLPEDLPSGVYFGWAHVDKGDVFKMVMSIGWNPYYKNKKKT 84 (153)
T ss_pred cccCCCCCEEecCeEEEecCCCccccCCccCCCCHHHHhcccccCCCceEEEeeeecCCCceeEEEEcccCcccCCcccc
Confidence 34455579999999999999999999999999987655444444558999999999877899999999999999999999
Q ss_pred eeeeEcccCCcccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCc
Q 023972 200 IEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 267 (274)
Q Consensus 200 ~E~~i~~df~~dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~~~~~~~~~~~~~~~ 267 (274)
+|+||+|||..|+||+++++.+++|||||+.|+|+|+|++.|+.||+.|++.|++|.+++|+.|.||+
T Consensus 85 ~E~hlih~f~~DFYge~l~~~IvGyiRpe~nf~slesLi~~I~~Di~vA~~~l~~p~~~k~K~dpff~ 152 (153)
T KOG3110|consen 85 MELHLIHDFGEDFYGETLKVIIVGYIRPELNFDSLESLIEAIHGDIEVAKKVLDLPEYAKFKEDPFFT 152 (153)
T ss_pred eeeeeehhcccchhhheeeEEEEEeeccccCcchHHHHHHHHHhhHHHHHHhhcCcchhhhccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999996
No 7
>PRK07143 hypothetical protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=284.67 Aligned_cols=191 Identities=17% Similarity=0.115 Sum_probs=156.2
Q ss_pred HHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH------HHHHcCCEEEEecCCCCccc
Q 023972 18 YQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV------AGKAAGMEVVAVPSLPKQTH 90 (274)
Q Consensus 18 ~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~------aA~~aGi~vi~V~~~~~~~~ 90 (274)
+.+|+ |.++.- .+...++.+|+.|++.+.. +.++.++++.|+.||.. .-++.+-.+..++....++.
T Consensus 75 ~~~Gv----d~~~~~~F~~~~a~ls~e~Fi~~ll~--l~~~~iVvG~Df~FG~~r~G~~~~L~~~~~~v~~v~~~~~~g~ 148 (279)
T PRK07143 75 ANLGF----KNIILLDFNEELQNLSGNDFIEKLTK--NQVSFFVVGKDFRFGKNASWNADDLKEYFPNVHIVEILKINQQ 148 (279)
T ss_pred HHCCC----CEEEEeCCCHHHhCCCHHHHHHHHHh--cCCCEEEECCCcccCCCCCCCHHHHHHhCCcEEEeCCEEcCCc
Confidence 55555 544433 3445788999999985544 45567777789998732 22343226777887777777
Q ss_pred ccccccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEeccCCCccccCccceecCCCCCCCCCCCCCCceEE
Q 023972 91 RYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYF 170 (274)
Q Consensus 91 ~iSss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G~~~g~~~lg~pTaN~~~~~~~~~~p~~~~GvY~ 170 (274)
.+||+ .|++.+.++++.. |++||||||+++|+|+|| |||.+++. +++|+ .|||+
T Consensus 149 ~ISST-~IR~~l~~G~i~~----------A~~lLGr~y~i~G~V~~G------------aNl~~~~~-~~~P~--~GVYa 202 (279)
T PRK07143 149 KISTS-LLKEFIEFGDIEL----------LNSLLLYNYSISITINKN------------FEFTYPQN-IIKLH--AGIYL 202 (279)
T ss_pred EEcHH-HHHHHHHcCCHHH----------HHHHcCCCcEEEEEEECC------------eEeCCCcC-cCCCC--CcEEE
Confidence 88886 7777788899987 999999999999999998 89998764 67776 89999
Q ss_pred EEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCc--ccCCCeEEEEEccccCCCCCCCCHHHHHHHHHHHHHHH
Q 023972 171 GWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDE--DFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKVA 248 (274)
Q Consensus 171 ~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~--dlyg~~~~v~~~~~iR~e~~f~~~~~l~~qi~~D~~~a 248 (274)
++|.++ +.+|+||+|||.||| +|||||| |++ |+|| +|+|+|++|||+|+||+| + +||++|++.|
T Consensus 203 ~~v~~~-~~~y~~v~niG~~PT-------iE~hild-f~~~~dlYg-~i~v~f~~~iR~e~kF~s-~---~qi~~D~~~a 268 (279)
T PRK07143 203 AYVVIN-NFKYHGILKINFNNK-------NKIKFFD-FDLIINKYQ-EIFIEIVKEIRIISSNED-N---NILNDDIEIA 268 (279)
T ss_pred EEEEEC-CEEEEEEEEecCCce-------EEEEEec-CCCCcCCCC-EEEEEEhhccCCCcCCCc-H---HHHHHHHHHH
Confidence 999986 489999999999999 8999996 999 8999 999999999999999999 5 8899999999
Q ss_pred HHHcCC
Q 023972 249 ERALDL 254 (274)
Q Consensus 249 ~~~~~~ 254 (274)
|++|+.
T Consensus 269 ~~~~~~ 274 (279)
T PRK07143 269 KKFFLN 274 (279)
T ss_pred HHHHHh
Confidence 999864
No 8
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.60 E-value=4.3e-15 Score=130.76 Aligned_cols=106 Identities=29% Similarity=0.390 Sum_probs=92.7
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+++..+...+ +++|+.+|||.+++++++...||+|+.|..++++++++|++|+||||+..|+++|+++|+.++
T Consensus 127 l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 127 RAAVTNAPRENAELMI-SLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred EEEEeCCCHHHHHHHH-HHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 5899999999999877 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccc-cccccEEEeccccccc
Q 023972 81 AVPSLPKQTHR-YTAADEVINSLLDLRP 107 (274)
Q Consensus 81 ~V~~~~~~~~~-iSss~~ii~~l~e~~~ 107 (274)
++.++...... ...++.+++++.+..+
T Consensus 206 ~v~~g~~~~~l~~~~a~~vi~~~~e~~~ 233 (248)
T PLN02770 206 GLTTRNPESLLMEAKPTFLIKDYEDPKL 233 (248)
T ss_pred EEeCCCCHHHHhhcCCCEEeccchhhHH
Confidence 99876432211 2356788888887443
No 9
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.56 E-value=1.6e-14 Score=128.05 Aligned_cols=103 Identities=34% Similarity=0.491 Sum_probs=89.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+++..+...+ +++|+.+||+.+++++++...||+|+.|..++++++++|++|+||||+..|+++|+++|+.++
T Consensus 128 l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i 206 (260)
T PLN03243 128 IAVASTRPRRYLERAI-EAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCV 206 (260)
T ss_pred EEEEeCcCHHHHHHHH-HHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 5899999999998777 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccccccccEEEeccccc
Q 023972 81 AVPSLPKQTHRYTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~~~iSss~~ii~~l~e~ 105 (274)
++.. .........++.++.++.++
T Consensus 207 ~v~g-~~~~~~l~~ad~vi~~~~el 230 (260)
T PLN03243 207 AVAG-KHPVYELSAGDLVVRRLDDL 230 (260)
T ss_pred EEec-CCchhhhccCCEEeCCHHHH
Confidence 9963 22222233456778877764
No 10
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.56 E-value=2.3e-14 Score=123.25 Aligned_cols=103 Identities=24% Similarity=0.391 Sum_probs=87.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v 79 (274)
++|+||+....+...+ +++|+..+||.++++++.+..||+|+.|..++++++++|+++++|||+. .|+++|+++|+.+
T Consensus 113 ~~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 113 LGIITDGLPVKQWEKL-ERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred EEEEeCCchHHHHHHH-HhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEE
Confidence 5899999988888777 8899999999999999999999999999999999999999999999998 7999999999999
Q ss_pred EEecCCCCcc---cccccccEEEecccc
Q 023972 80 VAVPSLPKQT---HRYTAADEVINSLLD 104 (274)
Q Consensus 80 i~V~~~~~~~---~~iSss~~ii~~l~e 104 (274)
+++..+.... .....++.+++++.+
T Consensus 192 i~~~~~~~~~~~~~~~~~~~~~i~~~~e 219 (221)
T TIGR02253 192 VWINQGKSSKMEDDVYPYPDYEISSLRE 219 (221)
T ss_pred EEECCCCCcccccccccCCCeeeCcHHh
Confidence 9998754322 112334567776654
No 11
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.54 E-value=2.3e-14 Score=126.17 Aligned_cols=86 Identities=20% Similarity=0.270 Sum_probs=79.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCC-cEEEecCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecCHhhHHHHHHcCCE
Q 023972 1 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGME 78 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~F-d~v~~~~~~~~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~~~di~aA~~aGi~ 78 (274)
++|+||+++..+...+ +++|+..+| |.|++++++...||+|+.|..+++++++. |++|+||||+..|+++|+++|+.
T Consensus 118 l~IvT~~~~~~~~~~l-~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 118 IGSTTGYTREMMDVVA-PEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred EEEECCCcHHHHHHHH-HHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 5899999999998767 888999986 99999999999999999999999999995 99999999999999999999999
Q ss_pred EEEecCCCC
Q 023972 79 VVAVPSLPK 87 (274)
Q Consensus 79 vi~V~~~~~ 87 (274)
+++|.++..
T Consensus 197 ~i~v~~g~~ 205 (253)
T TIGR01422 197 TVGLILSSN 205 (253)
T ss_pred EEEEecCCc
Confidence 999988753
No 12
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.53 E-value=4.7e-14 Score=130.44 Aligned_cols=105 Identities=39% Similarity=0.470 Sum_probs=92.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+++..+...+ +++|+..|||.+++++++...||+|++|..++++++++|++|+||||+..|+++|+++|+.++
T Consensus 235 laIaSn~~~~~~~~~L-~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~I 313 (381)
T PLN02575 235 MALVSTRPRKTLENAI-GSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV 313 (381)
T ss_pred EEEEeCCCHHHHHHHH-HHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 5899999999999777 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccccccccEEEeccccccc
Q 023972 81 AVPSLPKQTHRYTAADEVINSLLDLRP 107 (274)
Q Consensus 81 ~V~~~~~~~~~iSss~~ii~~l~e~~~ 107 (274)
++...... .....++.+++++.++..
T Consensus 314 gV~~~~~~-~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 314 AVASKHPI-YELGAADLVVRRLDELSI 339 (381)
T ss_pred EECCCCCh-hHhcCCCEEECCHHHHHH
Confidence 99864322 223456788999988644
No 13
>PRK09449 dUMP phosphatase; Provisional
Probab=99.53 E-value=5.1e-14 Score=121.48 Aligned_cols=104 Identities=21% Similarity=0.335 Sum_probs=86.7
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecCH-hhHHHHHHcCCE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSV-IGVVAGKAAGME 78 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p-~~~vvvgD~~-~di~aA~~aGi~ 78 (274)
++|+||+....+...+ +++|+..+||.++++++++..||+|+.|..+++++++.| ++|++|||+. .|+++|+++|+.
T Consensus 113 ~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 113 MGIITNGFTELQQVRL-ERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGID 191 (224)
T ss_pred EEEEeCCcHHHHHHHH-HhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCc
Confidence 5899999999888777 889999999999999999999999999999999999854 7899999998 699999999999
Q ss_pred EEEecCCCCcccccccccEEEeccccc
Q 023972 79 VVAVPSLPKQTHRYTAADEVINSLLDL 105 (274)
Q Consensus 79 vi~V~~~~~~~~~iSss~~ii~~l~e~ 105 (274)
++++............++.+++++.++
T Consensus 192 ~i~~~~~~~~~~~~~~~~~~i~~~~el 218 (224)
T PRK09449 192 TCWLNAHGREQPEGIAPTYQVSSLSEL 218 (224)
T ss_pred EEEECCCCCCCCCCCCCeEEECCHHHH
Confidence 999975322211112356777777654
No 14
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.52 E-value=1.8e-14 Score=124.73 Aligned_cols=84 Identities=48% Similarity=0.721 Sum_probs=79.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++++||+++..+...| +.+|+.++|+.+++++++..+||+|+.|+.+++++|++|.+||+|+|+..|+++|+++||.++
T Consensus 105 ~avaS~s~~~~~~~~L-~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 105 LAVASSSPRRAAERVL-ARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred EEEecCChHHHHHHHH-HHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 4789999999888777 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCC
Q 023972 81 AVPSL 85 (274)
Q Consensus 81 ~V~~~ 85 (274)
.+...
T Consensus 184 ~v~~~ 188 (221)
T COG0637 184 GVPAG 188 (221)
T ss_pred EecCC
Confidence 99873
No 15
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.52 E-value=7.2e-14 Score=119.38 Aligned_cols=104 Identities=28% Similarity=0.401 Sum_probs=90.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+.+..+...+ +++|+.++|+.+++++++...||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus 104 ~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 104 LGLVTNKPTPLARPLL-ELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred EEEEeCCCHHHHHHHH-HHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEE
Confidence 5899999999888766 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCccc--ccccccEEEeccccc
Q 023972 81 AVPSLPKQTH--RYTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~~--~iSss~~ii~~l~e~ 105 (274)
++.++..... ....++.+++++.++
T Consensus 183 ~v~~g~~~~~~l~~~~a~~~i~~~~~l 209 (213)
T TIGR01449 183 LLTYGYRYGEAIDLLPPDVLYDSLNEL 209 (213)
T ss_pred EEccCCCCCcchhhcCCCeEeCCHHHH
Confidence 9987643222 223566788877664
No 16
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.52 E-value=6.3e-14 Score=118.77 Aligned_cols=84 Identities=24% Similarity=0.413 Sum_probs=79.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||++...+...+ +++|+.++||.++++++++..||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus 111 ~~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 111 LAILSNGSPAMLKSLV-KHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred EEEEeCCCHHHHHHHH-HHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 5899999999998777 888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCC
Q 023972 81 AVPSL 85 (274)
Q Consensus 81 ~V~~~ 85 (274)
++...
T Consensus 190 ~v~r~ 194 (198)
T TIGR01428 190 WVNRP 194 (198)
T ss_pred EecCC
Confidence 99864
No 17
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.52 E-value=3.8e-14 Score=118.92 Aligned_cols=83 Identities=35% Similarity=0.605 Sum_probs=78.4
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+++..+...| +++|+.+|||.|++++++...||+|+.|..++++++++|++||+|||+..|+++|+++|++++
T Consensus 105 l~I~T~~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 105 MAVGTGSESAIAEALL-AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAV 183 (188)
T ss_pred EEEEcCCchHHHHHHH-HhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEE
Confidence 5899999999998777 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecC
Q 023972 81 AVPS 84 (274)
Q Consensus 81 ~V~~ 84 (274)
.+..
T Consensus 184 ~~~~ 187 (188)
T PRK10725 184 DVRL 187 (188)
T ss_pred eecC
Confidence 8853
No 18
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.51 E-value=4.5e-14 Score=121.93 Aligned_cols=104 Identities=30% Similarity=0.532 Sum_probs=91.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+....+...+ +++++..+|+.+++++++..+||+|+.|..+++++|++|++|++|||+..|+++|+++|+.++
T Consensus 111 ~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i 189 (222)
T PRK10826 111 IGLASASPLHMLEAVL-TMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSI 189 (222)
T ss_pred EEEEeCCcHHHHHHHH-HhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEE
Confidence 5899999999988766 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCcc-cccccccEEEeccccc
Q 023972 81 AVPSLPKQT-HRYTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~-~~iSss~~ii~~l~e~ 105 (274)
+++...... .....++.++.++.++
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 190 VVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred EecCCccCchhhhhhhheeccCHHHH
Confidence 998764333 2234456788888775
No 19
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.51 E-value=9.2e-14 Score=119.42 Aligned_cols=104 Identities=23% Similarity=0.298 Sum_probs=88.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHh-CCCCCcEEEEecCH-hhHHHHHHcCCE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIEDSV-IGVVAGKAAGME 78 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l-~v~p~~~vvvgD~~-~di~aA~~aGi~ 78 (274)
++|+||+....+...+ +.+|+..+||.++++++.+..||+|++|..+++++ +++|+++|+|||+. .|+++|+++|+.
T Consensus 115 ~~i~Sn~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 115 LYIVTNGVRETQYKRL-RKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred EEEEeCCchHHHHHHH-HHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 5899999999888766 88999999999999999999999999999999999 99999999999998 699999999999
Q ss_pred EEEecCCCCcccccccccEEEeccccc
Q 023972 79 VVAVPSLPKQTHRYTAADEVINSLLDL 105 (274)
Q Consensus 79 vi~V~~~~~~~~~iSss~~ii~~l~e~ 105 (274)
++++.++.........++.+++++.++
T Consensus 194 ~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 194 TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 999987533222223445677777653
No 20
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.51 E-value=6.8e-14 Score=120.06 Aligned_cols=104 Identities=27% Similarity=0.438 Sum_probs=91.0
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+.+..+...+ +.+|+.++|+.+++++++...||+|+.|.+++++++++|+++++|||+..|+++|+++|+.++
T Consensus 101 ~~i~S~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 101 LGIVTTKMRDTVEMGL-KLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred EEEEeCCCHHHHHHHH-HHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 4899999999998777 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccc--cccccEEEeccccc
Q 023972 81 AVPSLPKQTHR--YTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~~~--iSss~~ii~~l~e~ 105 (274)
++.++...... ...++.+++++.++
T Consensus 180 ~v~~g~~~~~~l~~~~~~~~i~~~~~l 206 (214)
T PRK13288 180 GVAWTIKGREYLEQYKPDFMLDKMSDL 206 (214)
T ss_pred EEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence 99887433221 23466788888764
No 21
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.51 E-value=9.5e-14 Score=120.08 Aligned_cols=104 Identities=31% Similarity=0.487 Sum_probs=92.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+++..+...| +++|+.++|+.+++.++....||+|+.+..++++++++|++++||||+..|+++|+++|+.++
T Consensus 108 l~i~T~k~~~~~~~~l-~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 108 LGIVTNKPERELDILL-KALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred EEEEeCCcHHHHHHHH-HHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEE
Confidence 5899999999999766 889999999999998888999999999999999999998899999999999999999999999
Q ss_pred EecCCCCc--ccccccccEEEeccccc
Q 023972 81 AVPSLPKQ--THRYTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~--~~~iSss~~ii~~l~e~ 105 (274)
.|.++... ......++.++.++.++
T Consensus 187 ~v~~g~~~~~~l~~~~~d~vi~~~~el 213 (220)
T COG0546 187 GVTWGYNSREELAQAGADVVIDSLAEL 213 (220)
T ss_pred EEECCCCCCcchhhcCCCEEECCHHHH
Confidence 99998642 22345678899988875
No 22
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.50 E-value=1.1e-13 Score=120.27 Aligned_cols=104 Identities=25% Similarity=0.344 Sum_probs=89.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||++...+...+ +++|+..+|+.++++++....||+|+.|..+++++|++|++|++|||+..|+++|+++|+.++
T Consensus 114 l~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 114 WGIVTNKPEYLARLIL-PQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred EEEECCCCHHHHHHHH-HHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEE
Confidence 4899999998887666 888999999999999988899999999999999999999999999999999999999999999
Q ss_pred EecCCCCccc---ccccccEEEeccccc
Q 023972 81 AVPSLPKQTH---RYTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~~---~iSss~~ii~~l~e~ 105 (274)
++.++..... ....++.+++++.++
T Consensus 193 ~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (229)
T PRK13226 193 AALWGYRLHDDDPLAWQADVLVEQPQLL 220 (229)
T ss_pred EEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence 9988753221 123466888888764
No 23
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.49 E-value=1.2e-13 Score=117.78 Aligned_cols=104 Identities=27% Similarity=0.367 Sum_probs=90.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+....+...+ +++|+..+|+.++++++....||+|+.|..++++++++|++++||||+..|+.+|+++|+.++
T Consensus 94 ~~i~Sn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 94 TAIATGKSGPRARSLL-EALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred EEEEeCCchHHHHHHH-HHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEE
Confidence 4899999999988767 889999999999999998899999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccc--cccccEEEeccccc
Q 023972 81 AVPSLPKQTHR--YTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~~~--iSss~~ii~~l~e~ 105 (274)
.+.++...... ...++.+++++.++
T Consensus 173 ~~~~g~~~~~~l~~~~~~~~~~~~~~l 199 (205)
T TIGR01454 173 AALWGEGDAGELLAARPDFLLRKPQSL 199 (205)
T ss_pred EEEecCCChhhhhhcCCCeeeCCHHHH
Confidence 99887544332 23456777777653
No 24
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.49 E-value=1.6e-13 Score=118.29 Aligned_cols=104 Identities=30% Similarity=0.448 Sum_probs=87.7
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~v 79 (274)
++|+||+........+ +++||.++||.|+++++++..||+|++|..+++++|++|+++++|||+.. |+.+|+++|+++
T Consensus 117 l~ilTNg~~~~~~~~l-~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 117 LGILTNGARPHQERKL-RQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKT 195 (229)
T ss_pred EEEEeCCChHHHHHHH-HHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence 5899999888888777 88899999999999999999999999999999999999999999999987 779999999999
Q ss_pred EEecCCCCcc-cccccccEEEeccccc
Q 023972 80 VAVPSLPKQT-HRYTAADEVINSLLDL 105 (274)
Q Consensus 80 i~V~~~~~~~-~~iSss~~ii~~l~e~ 105 (274)
+++....... .....++..+.++.++
T Consensus 196 vwi~~~~~~~~~~~~~~~~~i~~l~~l 222 (229)
T COG1011 196 VWINRGGKPLPDALEAPDYEISSLAEL 222 (229)
T ss_pred EEECCCCCCCCCCccCCceEEcCHHHH
Confidence 9998754321 1113445667766653
No 25
>PLN02811 hydrolase
Probab=99.49 E-value=7.8e-14 Score=120.45 Aligned_cols=107 Identities=41% Similarity=0.642 Sum_probs=88.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC--CCCCCCCCHHHHHHHHHHhC---CCCCcEEEEecCHhhHHHHHHc
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAA 75 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~--~~~~~KP~pe~f~~~l~~l~---v~p~~~vvvgD~~~di~aA~~a 75 (274)
++|+||+.+..+...+.++.++.++|+.+++++ ++...||+|+.|..++++++ ++|++|+||||+..|+++|+++
T Consensus 97 ~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~a 176 (220)
T PLN02811 97 IAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNA 176 (220)
T ss_pred EEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHC
Confidence 589999998766555545557889999999999 88889999999999999996 9999999999999999999999
Q ss_pred CCEEEEecCCCCcccccccccEEEeccccccc
Q 023972 76 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 107 (274)
Q Consensus 76 Gi~vi~V~~~~~~~~~iSss~~ii~~l~e~~~ 107 (274)
|+.++++.++.........++.+++++.++..
T Consensus 177 G~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~ 208 (220)
T PLN02811 177 GMSVVMVPDPRLDKSYCKGADQVLSSLLDFKP 208 (220)
T ss_pred CCeEEEEeCCCCcHhhhhchhhHhcCHhhCCH
Confidence 99999998754332223455678888877544
No 26
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.48 E-value=4e-14 Score=122.03 Aligned_cols=83 Identities=25% Similarity=0.444 Sum_probs=76.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCc-EEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd-~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v 79 (274)
++|+||+++..+...| +++|+.++|+ .++++++++..||+|+.|..++++++++|++|+||||+..|+++|+++|+.+
T Consensus 104 ~~ivTn~~~~~~~~~l-~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 182 (221)
T PRK10563 104 MCVVSNGPVSKMQHSL-GKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEV 182 (221)
T ss_pred EEEEeCCcHHHHHHHH-HhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEE
Confidence 5899999999898777 8889999996 6888888899999999999999999999999999999999999999999999
Q ss_pred EEecC
Q 023972 80 VAVPS 84 (274)
Q Consensus 80 i~V~~ 84 (274)
+++..
T Consensus 183 i~~~~ 187 (221)
T PRK10563 183 FYFCA 187 (221)
T ss_pred EEECC
Confidence 98864
No 27
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.48 E-value=1.6e-13 Score=118.09 Aligned_cols=104 Identities=27% Similarity=0.426 Sum_probs=88.9
Q ss_pred CEEEcCCChHHHHHHHHHHcCCC--CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecCHhhHHHHHHcCC
Q 023972 1 MALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGM 77 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~--~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~~~di~aA~~aGi 77 (274)
++|+||+....+...| +++|+. ++|+.++++++....||+|+.|..+++++++. |++|+||||+..|+++|+++|+
T Consensus 106 ~~ivT~~~~~~~~~~l-~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~ 184 (220)
T TIGR03351 106 VALTTGFDRDTAERLL-EKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGA 184 (220)
T ss_pred EEEEeCCchHHHHHHH-HHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCC
Confidence 5899999999999877 788998 99999999999989999999999999999997 7999999999999999999999
Q ss_pred EE-EEecCCCCcccc--cccccEEEeccccc
Q 023972 78 EV-VAVPSLPKQTHR--YTAADEVINSLLDL 105 (274)
Q Consensus 78 ~v-i~V~~~~~~~~~--iSss~~ii~~l~e~ 105 (274)
.+ +++.++...... ...++.++.++.++
T Consensus 185 ~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l 215 (220)
T TIGR03351 185 GAVVGVLTGAHDAEELSRHPHTHVLDSVADL 215 (220)
T ss_pred CeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence 99 888775433221 23455777777654
No 28
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.47 E-value=2.1e-13 Score=118.37 Aligned_cols=84 Identities=17% Similarity=0.276 Sum_probs=77.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE-
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV- 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v- 79 (274)
++|+||+++..+...+ +++|+.++||.++++++++..||+|+.|..++++++++|++|++|||+..|+++|+++|+.+
T Consensus 112 ~~i~Tn~~~~~~~~~l-~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~ 190 (224)
T PRK14988 112 RILLTNAHPHNLAVKL-EHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYC 190 (224)
T ss_pred EEEEeCcCHHHHHHHH-HHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEE
Confidence 5899999999988777 88999999999999999999999999999999999999999999999999999999999984
Q ss_pred EEecCC
Q 023972 80 VAVPSL 85 (274)
Q Consensus 80 i~V~~~ 85 (274)
+.|...
T Consensus 191 ~~v~~~ 196 (224)
T PRK14988 191 LGVTNP 196 (224)
T ss_pred EEEeCC
Confidence 667654
No 29
>PRK11587 putative phosphatase; Provisional
Probab=99.47 E-value=2.8e-13 Score=116.77 Aligned_cols=105 Identities=30% Similarity=0.475 Sum_probs=87.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||++...+...+ +..++ .+|+.+++++++...||+|+.|..+++++|++|++|+||||+..|+++|+++|+.++
T Consensus 102 ~~ivTn~~~~~~~~~l-~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i 179 (218)
T PRK11587 102 WAIVTSGSVPVASARH-KAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVI 179 (218)
T ss_pred EEEEcCCCchHHHHHH-HhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEE
Confidence 5899999988776555 77788 568899999888899999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccccccccEEEecccccccc
Q 023972 81 AVPSLPKQTHRYTAADEVINSLLDLRPE 108 (274)
Q Consensus 81 ~V~~~~~~~~~iSss~~ii~~l~e~~~~ 108 (274)
++.++... .....++.+++++.++...
T Consensus 180 ~v~~~~~~-~~~~~~~~~~~~~~el~~~ 206 (218)
T PRK11587 180 AVNAPADT-PRLDEVDLVLHSLEQLTVT 206 (218)
T ss_pred EECCCCch-hhhccCCEEecchhheeEE
Confidence 99875432 2234466888888876443
No 30
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.46 E-value=2.6e-13 Score=113.74 Aligned_cols=81 Identities=27% Similarity=0.442 Sum_probs=75.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCC----CCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~----~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG 76 (274)
++|+||+++..+...+ +++|+..+||.++++++... .||+|+.|..++++++++|+++++|||+..|+++|+++|
T Consensus 100 ~~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G 178 (184)
T TIGR01993 100 KIIFTNGDRAHARRAL-NRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALG 178 (184)
T ss_pred EEEEeCCCHHHHHHHH-HHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcC
Confidence 4799999999998777 88899999999999998877 599999999999999999999999999999999999999
Q ss_pred CEEEEe
Q 023972 77 MEVVAV 82 (274)
Q Consensus 77 i~vi~V 82 (274)
+++++|
T Consensus 179 ~~~i~v 184 (184)
T TIGR01993 179 MKTVLV 184 (184)
T ss_pred CEEeeC
Confidence 999875
No 31
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.45 E-value=2.8e-13 Score=120.36 Aligned_cols=86 Identities=22% Similarity=0.287 Sum_probs=78.1
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCC-cEEEecCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecCHhhHHHHHHcCCE
Q 023972 1 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGME 78 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~F-d~v~~~~~~~~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~~~di~aA~~aGi~ 78 (274)
++|+||+++..+...+ +.+++..+| |.+++++++...||+|+.|..+++++++. |++|+||||+..|+++|+++|+.
T Consensus 120 l~I~T~~~~~~~~~~l-~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 120 IGSTTGYTREMMDVVV-PLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred EEEEcCCcHHHHHHHH-HHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 5899999999988766 777888875 89999999999999999999999999996 69999999999999999999999
Q ss_pred EEEecCCCC
Q 023972 79 VVAVPSLPK 87 (274)
Q Consensus 79 vi~V~~~~~ 87 (274)
+++|.++..
T Consensus 199 ~i~v~~g~~ 207 (267)
T PRK13478 199 TVGVILSGN 207 (267)
T ss_pred EEEEccCcc
Confidence 999988653
No 32
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.42 E-value=6.1e-13 Score=113.05 Aligned_cols=85 Identities=15% Similarity=0.174 Sum_probs=76.0
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||++.......+....++..+||.++++++++..||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus 103 ~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 103 VVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred EEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 58999999887665442334788999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCC
Q 023972 81 AVPSL 85 (274)
Q Consensus 81 ~V~~~ 85 (274)
.+...
T Consensus 183 ~~~~~ 187 (199)
T PRK09456 183 LVTDK 187 (199)
T ss_pred EecCC
Confidence 98763
No 33
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.41 E-value=9e-13 Score=107.81 Aligned_cols=81 Identities=33% Similarity=0.549 Sum_probs=76.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++++||.++..+...+ +++|+.++|+.++++++.+..||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus 96 ~~i~Sn~~~~~~~~~l-~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i 174 (176)
T PF13419_consen 96 LVIVSNGSRERIERVL-ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTI 174 (176)
T ss_dssp EEEEESSEHHHHHHHH-HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEE
T ss_pred eEEeecCCcccccccc-cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEE
Confidence 4799999999998777 888999999999999999999999999999999999999999999999999999999999998
Q ss_pred Ee
Q 023972 81 AV 82 (274)
Q Consensus 81 ~V 82 (274)
+|
T Consensus 175 ~v 176 (176)
T PF13419_consen 175 WV 176 (176)
T ss_dssp EE
T ss_pred eC
Confidence 76
No 34
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.40 E-value=2e-12 Score=116.26 Aligned_cols=106 Identities=34% Similarity=0.496 Sum_probs=87.0
Q ss_pred CEEEcCCChHHHHHHHHHHcCC---CCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972 1 MALASNSHRATIESKISYQHGW---NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl---~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi 77 (274)
++|+||+....+...+ ++++. ..+|+.+ +++++...||+|+.|..++++++++|++|+||||+..|+++|+++|+
T Consensus 163 l~IvTn~~~~~~~~~l-~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~ 240 (286)
T PLN02779 163 VAVCSTSNEKAVSKIV-NTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGM 240 (286)
T ss_pred EEEEeCCCHHHHHHHH-HHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCC
Confidence 5899999999888666 55533 3344555 78888899999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCcccccccccEEEecccccccc
Q 023972 78 EVVAVPSLPKQTHRYTAADEVINSLLDLRPE 108 (274)
Q Consensus 78 ~vi~V~~~~~~~~~iSss~~ii~~l~e~~~~ 108 (274)
.++.+.++.........++.++.++.++...
T Consensus 241 ~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~ 271 (286)
T PLN02779 241 RCIVTKSSYTADEDFSGADAVFDCLGDVPLE 271 (286)
T ss_pred EEEEEccCCccccccCCCcEEECChhhcchh
Confidence 9999988654444445677889988876554
No 35
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.40 E-value=1.6e-12 Score=107.96 Aligned_cols=80 Identities=41% Similarity=0.655 Sum_probs=73.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+.... .. +..++|+..+||.++++++.+..||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus 104 ~~i~Tn~~~~~-~~-~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i 181 (183)
T TIGR01509 104 LALLTNSPRDH-AV-LVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTV 181 (183)
T ss_pred EEEEeCCchHH-HH-HHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEE
Confidence 47999999988 54 43558999999999999999999999999999999999999999999999999999999999998
Q ss_pred Ee
Q 023972 81 AV 82 (274)
Q Consensus 81 ~V 82 (274)
+|
T Consensus 182 ~v 183 (183)
T TIGR01509 182 LV 183 (183)
T ss_pred eC
Confidence 75
No 36
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.38 E-value=1.6e-12 Score=113.75 Aligned_cols=99 Identities=18% Similarity=0.230 Sum_probs=81.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi~v 79 (274)
++|+||++.. + +++|+.++||.++++++....||+|+.|..++++++++|++|+||||+ ..|+.+|+++|+.+
T Consensus 131 l~i~Tn~~~~-----~-~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 131 LVAITNGNAQ-----P-ELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EEEEECCCch-----H-HHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeE
Confidence 5899998765 3 678999999999999999999999999999999999999999999999 58999999999999
Q ss_pred EEecCCCCcc----cccccccEEEeccccc
Q 023972 80 VAVPSLPKQT----HRYTAADEVINSLLDL 105 (274)
Q Consensus 80 i~V~~~~~~~----~~iSss~~ii~~l~e~ 105 (274)
+++......- ...-.++..+++|.++
T Consensus 205 i~v~~~~~~~~~~~~~~~~p~~~i~~l~el 234 (238)
T PRK10748 205 CWINPENGDLMQTWDSRLLPHIEISRLASL 234 (238)
T ss_pred EEEcCCCccccccccccCCCCEEECCHHHH
Confidence 9998743211 1111244667776653
No 37
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.37 E-value=2.8e-12 Score=114.50 Aligned_cols=104 Identities=31% Similarity=0.362 Sum_probs=90.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||++...+...+ +++++..+|+.++++++....||+|+.|..++++++++|++|++|||+..|+++|+++|+.++
T Consensus 120 l~ivTn~~~~~~~~~l-~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i 198 (272)
T PRK13223 120 MALITNKPERFVAPLL-DQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCV 198 (272)
T ss_pred EEEEECCcHHHHHHHH-HHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 4799999999888666 788999999999999998899999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccc--cccccEEEeccccc
Q 023972 81 AVPSLPKQTHR--YTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~~~--iSss~~ii~~l~e~ 105 (274)
+|.++...... ...++.+++++.++
T Consensus 199 ~v~~G~~~~~~l~~~~~~~vi~~l~el 225 (272)
T PRK13223 199 ALSYGYNHGRPIAEESPALVIDDLRAL 225 (272)
T ss_pred EEecCCCCchhhhhcCCCEEECCHHHH
Confidence 99886433222 23567888888775
No 38
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.36 E-value=1.8e-12 Score=110.10 Aligned_cols=79 Identities=32% Similarity=0.421 Sum_probs=71.9
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~v 79 (274)
++|+||++... ...+ +++|+..+||.++++++++..||+|+.|..++++++++|++|++|||+. .|+++|+++|+.+
T Consensus 124 ~~i~Sn~~~~~-~~~l-~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~ 201 (203)
T TIGR02252 124 LGVISNFDSRL-RGLL-EALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRA 201 (203)
T ss_pred EEEEeCCchhH-HHHH-HHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCee
Confidence 48999998764 5555 8889999999999999999999999999999999999999999999997 7999999999998
Q ss_pred EE
Q 023972 80 VA 81 (274)
Q Consensus 80 i~ 81 (274)
++
T Consensus 202 i~ 203 (203)
T TIGR02252 202 LL 203 (203)
T ss_pred eC
Confidence 74
No 39
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.35 E-value=2.9e-12 Score=106.94 Aligned_cols=80 Identities=44% Similarity=0.617 Sum_probs=72.0
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+... ...+ +++|+..+||.++++++....||+|+.|..++++++++|++||||||+..|+++|+++|++++
T Consensus 106 ~~i~s~~~~~--~~~l-~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i 182 (185)
T TIGR01990 106 IALASASKNA--PTVL-EKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAV 182 (185)
T ss_pred EEEEeCCccH--HHHH-HhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEE
Confidence 4789987543 3445 888999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eec
Q 023972 81 AVP 83 (274)
Q Consensus 81 ~V~ 83 (274)
+|.
T Consensus 183 ~v~ 185 (185)
T TIGR01990 183 GVG 185 (185)
T ss_pred ecC
Confidence 873
No 40
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.35 E-value=6.5e-12 Score=108.13 Aligned_cols=104 Identities=27% Similarity=0.416 Sum_probs=90.1
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+....+...+ +++|+..+|+.+++++++...||+|+.|..++++++++|+++++|||+..|+++|+++|+.++
T Consensus 112 ~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i 190 (226)
T PRK13222 112 LAVVTNKPTPFVAPLL-EALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSV 190 (226)
T ss_pred EEEEeCCCHHHHHHHH-HHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEE
Confidence 4799999999888766 888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccc--cccccEEEeccccc
Q 023972 81 AVPSLPKQTHR--YTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~~~--iSss~~ii~~l~e~ 105 (274)
++.++...... ...++.+++++.++
T Consensus 191 ~v~~g~~~~~~~~~~~~~~~i~~~~~l 217 (226)
T PRK13222 191 GVTYGYNYGEPIALSEPDVVIDHFAEL 217 (226)
T ss_pred EECcCCCCccchhhcCCCEEECCHHHH
Confidence 99886542222 23466888888764
No 41
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.33 E-value=1.3e-11 Score=103.13 Aligned_cols=102 Identities=26% Similarity=0.328 Sum_probs=77.3
Q ss_pred CEEEcCCCh---------------HHHHHHHHHHcCCCCCCcEEEec-----------CCCCCCCCCHHHHHHHHHHhCC
Q 023972 1 MALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----------DEVRTGKPSPDIFLEAAKRLNM 54 (274)
Q Consensus 1 laIvSn~~~---------------~~~~~~l~~~~gl~~~Fd~v~~~-----------~~~~~~KP~pe~f~~~l~~l~v 54 (274)
++|+||++. ..+...+ .++++. |+.++.+ ++...+||+|++|..+++++++
T Consensus 45 l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~ 121 (176)
T TIGR00213 45 LVLVTNQSGIARGYFTEAQFEQLTEWMDWSL-AERDVD--LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHI 121 (176)
T ss_pred EEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCCC--ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCc
Confidence 589999985 2333334 555665 7776654 2455789999999999999999
Q ss_pred CCCcEEEEecCHhhHHHHHHcCCEE-EEecCCCCccccc-ccccEEEeccccc
Q 023972 55 EPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHRY-TAADEVINSLLDL 105 (274)
Q Consensus 55 ~p~~~vvvgD~~~di~aA~~aGi~v-i~V~~~~~~~~~i-Sss~~ii~~l~e~ 105 (274)
+|++|+||||+..|+++|+++|+.+ +++.++....... ..++.+++++.++
T Consensus 122 ~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 122 DMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred ChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 9999999999999999999999998 7888764322222 3466888877664
No 42
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.32 E-value=1.2e-12 Score=108.66 Aligned_cols=74 Identities=19% Similarity=0.278 Sum_probs=69.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 75 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a 75 (274)
++|+||+++..+...+ +++|+..+||.|+++++++..||+|+.|..+++++|++|++|+||||+.+|+.+|+++
T Consensus 102 ~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 102 VAILSNASHWAFDQFA-QQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HhhhhCCCHHHHHHHH-HHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 5799999999998777 8889999999999999999999999999999999999999999999999999999864
No 43
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.31 E-value=4.7e-12 Score=105.68 Aligned_cols=79 Identities=42% Similarity=0.655 Sum_probs=71.9
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+ ..+...+ +++|+.++|+.++++++....||+|+.|..++++++++|+++++|||+..|+++|+++|+.++
T Consensus 107 i~i~S~~--~~~~~~l-~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i 183 (185)
T TIGR02009 107 VGLGSSS--KNADRIL-AKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAV 183 (185)
T ss_pred EEEEeCc--hhHHHHH-HHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEe
Confidence 4789988 4466555 889999999999999999999999999999999999999999999999999999999999998
Q ss_pred Ee
Q 023972 81 AV 82 (274)
Q Consensus 81 ~V 82 (274)
+|
T Consensus 184 ~v 185 (185)
T TIGR02009 184 AV 185 (185)
T ss_pred eC
Confidence 75
No 44
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.30 E-value=4.7e-12 Score=108.29 Aligned_cols=83 Identities=20% Similarity=0.290 Sum_probs=72.5
Q ss_pred CEEEcCCChHH--HHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972 1 MALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 78 (274)
Q Consensus 1 laIvSn~~~~~--~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~ 78 (274)
++|+||+.... ....+ ...++.++||.++++++.+..||+|+.|..++++++++|++|+||||+..|+.+|+++|+.
T Consensus 113 l~i~Sn~~~~~~~~~~~~-~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 113 TACITNNFPTDHSAEEAL-LPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred EEEEeCCCCccchhhhHh-hhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 47999987653 22223 3457889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecC
Q 023972 79 VVAVPS 84 (274)
Q Consensus 79 vi~V~~ 84 (274)
++++..
T Consensus 192 ~i~v~~ 197 (211)
T TIGR02247 192 TIKVSD 197 (211)
T ss_pred EEEECC
Confidence 999965
No 45
>PRK06769 hypothetical protein; Validated
Probab=99.28 E-value=9.4e-12 Score=103.79 Aligned_cols=85 Identities=18% Similarity=0.255 Sum_probs=67.7
Q ss_pred CEEEcCCChH--------HHHHHHHHHcCCCCCCcEEE-ecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHH
Q 023972 1 MALASNSHRA--------TIESKISYQHGWNESFSVIV-GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 71 (274)
Q Consensus 1 laIvSn~~~~--------~~~~~l~~~~gl~~~Fd~v~-~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~a 71 (274)
++|+||++.. .....+ +.+|+..+|..+. ++++....||+|+.|.+++++++++|++|+||||+..|+++
T Consensus 47 l~I~Tn~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~a 125 (173)
T PRK06769 47 IFSFTNQPGIADGIATIADFVQEL-KGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVA 125 (173)
T ss_pred EEEEECCchhcCCcCCHHHHHHHH-HhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHH
Confidence 5899998742 122234 5667655543332 45666789999999999999999999999999999999999
Q ss_pred HHHcCCEEEEecCCC
Q 023972 72 GKAAGMEVVAVPSLP 86 (274)
Q Consensus 72 A~~aGi~vi~V~~~~ 86 (274)
|+++|+.++++.++.
T Consensus 126 A~~aGi~~i~v~~g~ 140 (173)
T PRK06769 126 AAKVNATTILVRTGA 140 (173)
T ss_pred HHHCCCeEEEEecCC
Confidence 999999999998864
No 46
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.26 E-value=2.6e-11 Score=125.97 Aligned_cols=106 Identities=32% Similarity=0.478 Sum_probs=92.4
Q ss_pred CEEEcCCChHHHHHHHHHHcCCC-CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~-~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v 79 (274)
++|+||+.+..+...| +++|+. .+||.+++++++...||+|++|.+++++++++|++||||||+..|+++|+++||++
T Consensus 180 l~IvSn~~~~~~~~~L-~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~ 258 (1057)
T PLN02919 180 VAVASSADRIKVDANL-AAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRC 258 (1057)
T ss_pred EEEEeCCcHHHHHHHH-HHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 5899999999998777 888996 79999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCcccc-cccccEEEeccccccc
Q 023972 80 VAVPSLPKQTHR-YTAADEVINSLLDLRP 107 (274)
Q Consensus 80 i~V~~~~~~~~~-iSss~~ii~~l~e~~~ 107 (274)
+++.+....... ...++.+++++.++..
T Consensus 259 I~v~~~~~~~~L~~~~a~~vi~~l~el~~ 287 (1057)
T PLN02919 259 IAVTTTLSEEILKDAGPSLIRKDIGNISL 287 (1057)
T ss_pred EEECCCCCHHHHhhCCCCEEECChHHCCH
Confidence 999886433222 3456688998877543
No 47
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.24 E-value=7.1e-11 Score=98.95 Aligned_cols=102 Identities=29% Similarity=0.346 Sum_probs=76.5
Q ss_pred CEEEcCCCh---------------HHHHHHHHHHcCCCCCCcEEEec-----CCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972 1 MALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----DEVRTGKPSPDIFLEAAKRLNMEPSSSL 60 (274)
Q Consensus 1 laIvSn~~~---------------~~~~~~l~~~~gl~~~Fd~v~~~-----~~~~~~KP~pe~f~~~l~~l~v~p~~~v 60 (274)
++|+||++. ..+...+ +++|+ +|+.++.+ ++....||+|+.|..++++++++|++|+
T Consensus 48 l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~--~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~ 124 (181)
T PRK08942 48 VVVATNQSGIARGLFTEAQLNALHEKMDWSL-ADRGG--RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSP 124 (181)
T ss_pred EEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEE
Confidence 589999873 2233334 55666 58877764 3457899999999999999999999999
Q ss_pred EEecCHhhHHHHHHcCCEEEEecCCCCcccc-cccc--cEEEeccccc
Q 023972 61 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAA--DEVINSLLDL 105 (274)
Q Consensus 61 vvgD~~~di~aA~~aGi~vi~V~~~~~~~~~-iSss--~~ii~~l~e~ 105 (274)
||||+..|+.+|+++|+.++++.++...... ...+ +.++.++.++
T Consensus 125 ~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el 172 (181)
T PRK08942 125 MVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL 172 (181)
T ss_pred EEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence 9999999999999999999999875432211 1223 5677777653
No 48
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.23 E-value=3.6e-11 Score=101.91 Aligned_cols=73 Identities=26% Similarity=0.439 Sum_probs=68.1
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 75 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a 75 (274)
++|+||+++..+...| +++|+..+|+.++++++... ||+|+.|..++++++++|++|+||||+..|+.+|+++
T Consensus 125 ~~i~T~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 125 MAVVTGRPRKDAAKFL-TTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred EEEECCCCHHHHHHHH-HHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5899999999998777 88999999999999999877 9999999999999999999999999999999999874
No 49
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.23 E-value=4.4e-11 Score=106.85 Aligned_cols=101 Identities=20% Similarity=0.281 Sum_probs=85.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+.+..+...+ +++|+.++|+.++++++.. +.|+.|..++++++++|++|+||||+..|+++|+++|+.++
T Consensus 161 laIvSn~~~~~~~~~L-~~~gl~~~F~~vi~~~~~~---~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I 236 (273)
T PRK13225 161 LGILSSNSRQNIEAFL-QRQGLRSLFSVVQAGTPIL---SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAV 236 (273)
T ss_pred EEEEeCCCHHHHHHHH-HHcCChhheEEEEecCCCC---CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 5899999999999777 8899999999998887642 34688999999999999999999999999999999999999
Q ss_pred EecCCCCcccc--cccccEEEeccccc
Q 023972 81 AVPSLPKQTHR--YTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~~~--iSss~~ii~~l~e~ 105 (274)
++.++...... ...++.+++++.++
T Consensus 237 ~v~~g~~~~~~l~~~~ad~~i~~~~eL 263 (273)
T PRK13225 237 AVTWGFNDRQSLVAACPDWLLETPSDL 263 (273)
T ss_pred EEecCCCCHHHHHHCCCCEEECCHHHH
Confidence 99887544321 23567899888775
No 50
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.23 E-value=9.5e-12 Score=107.75 Aligned_cols=83 Identities=25% Similarity=0.335 Sum_probs=75.1
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~v 79 (274)
++++||.+...- .++..+|+..|||+++.|++.+..||+|++|..+++++++.|++|++|||... |+++|+++|++.
T Consensus 132 l~iisN~d~r~~--~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~a 209 (237)
T KOG3085|consen 132 LGIISNFDDRLR--LLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHA 209 (237)
T ss_pred EEEecCCcHHHH--HHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEE
Confidence 478999988854 34478899999999999999999999999999999999999999999999977 899999999999
Q ss_pred EEecCC
Q 023972 80 VAVPSL 85 (274)
Q Consensus 80 i~V~~~ 85 (274)
+.|...
T Consensus 210 ilv~~~ 215 (237)
T KOG3085|consen 210 ILVDNS 215 (237)
T ss_pred EEEccc
Confidence 999753
No 51
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.22 E-value=3.5e-11 Score=97.57 Aligned_cols=82 Identities=28% Similarity=0.434 Sum_probs=65.4
Q ss_pred CEEEcCCCh---------------HHHHHHHHHHcCCCCCCcEEEe----cCCCCCCCCCHHHHHHHHHHhCCCCCcEEE
Q 023972 1 MALASNSHR---------------ATIESKISYQHGWNESFSVIVG----SDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 61 (274)
Q Consensus 1 laIvSn~~~---------------~~~~~~l~~~~gl~~~Fd~v~~----~~~~~~~KP~pe~f~~~l~~l~v~p~~~vv 61 (274)
++|+||+++ ..+...+ +++|+... ..+++ +++....||+|++|..++++++++|++|+|
T Consensus 46 ~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~-~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~ 123 (147)
T TIGR01656 46 VVVVTNQSGIGRGYFSAEAFRAPNGRVLELL-RQLGVAVD-GVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLV 123 (147)
T ss_pred EEEEeCCCcccCCcCCHHHHHHHHHHHHHHH-HhCCCcee-EEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence 479999874 3444444 77788521 22222 345567899999999999999999999999
Q ss_pred EecCHhhHHHHHHcCCEEEEecC
Q 023972 62 IEDSVIGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 62 vgD~~~di~aA~~aGi~vi~V~~ 84 (274)
|||+..|+++|+++|+++++++.
T Consensus 124 IGDs~~Di~~A~~~Gi~~v~i~~ 146 (147)
T TIGR01656 124 VGDRLRDLQAARNAGLAAVLLVD 146 (147)
T ss_pred EcCCHHHHHHHHHCCCCEEEecC
Confidence 99999999999999999999975
No 52
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.20 E-value=6.7e-11 Score=113.04 Aligned_cols=101 Identities=17% Similarity=0.220 Sum_probs=84.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||+++..+...+ +++|+.+||+.+++++++. .||.|+.|..++++++ |++|++|||+..|+++|+++|+.++
T Consensus 349 l~IvS~~~~~~~~~~l-~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I 424 (459)
T PRK06698 349 IYIASNGLTEYLRAIV-SYYDLDQWVTETFSIEQIN-SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAI 424 (459)
T ss_pred EEEEeCCchHHHHHHH-HHCCcHhhcceeEecCCCC-CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEE
Confidence 5899999999999877 8899999999999999874 4677889999998874 6899999999999999999999999
Q ss_pred EecCCCCcccccccccEEEeccccc
Q 023972 81 AVPSLPKQTHRYTAADEVINSLLDL 105 (274)
Q Consensus 81 ~V~~~~~~~~~iSss~~ii~~l~e~ 105 (274)
++.++.........++.++.++.++
T Consensus 425 ~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 425 GCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred EEeCCCCcccccCCCCEEeCCHHHH
Confidence 9988644333334567888887764
No 53
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.19 E-value=6.1e-11 Score=102.19 Aligned_cols=105 Identities=46% Similarity=0.605 Sum_probs=85.7
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEe--cCCCCCCCCCHHHHHHHHHHhCCCC-CcEEEEecCHhhHHHHHHcCC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVG--SDEVRTGKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGM 77 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~--~~~~~~~KP~pe~f~~~l~~l~v~p-~~~vvvgD~~~di~aA~~aGi 77 (274)
++++|++++.+...++..+-++...|+.++. ..++...||+|+.|+.++++++..| ++|+|++|++.|+++|+++|+
T Consensus 111 ~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm 190 (222)
T KOG2914|consen 111 VALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGM 190 (222)
T ss_pred eeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCC
Confidence 5899999999999888555458889998888 5688999999999999999999998 999999999999999999999
Q ss_pred EEEEecCCCCcccccccccEEEeccccc
Q 023972 78 EVVAVPSLPKQTHRYTAADEVINSLLDL 105 (274)
Q Consensus 78 ~vi~V~~~~~~~~~iSss~~ii~~l~e~ 105 (274)
.+++++...........++.+++++.+.
T Consensus 191 ~vi~v~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 191 QVVGVATPDLSNLFSAGATLILESLEDF 218 (222)
T ss_pred eEEEecCCCcchhhhhccceeccccccc
Confidence 9999988433332233334555555443
No 54
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.18 E-value=1.4e-10 Score=95.73 Aligned_cols=82 Identities=15% Similarity=0.200 Sum_probs=69.8
Q ss_pred CEEEcCCC---------------hHHHHHHHHHHcCCCCCCcEEE-e----cCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972 1 MALASNSH---------------RATIESKISYQHGWNESFSVIV-G----SDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60 (274)
Q Consensus 1 laIvSn~~---------------~~~~~~~l~~~~gl~~~Fd~v~-~----~~~~~~~KP~pe~f~~~l~~l~v~p~~~v 60 (274)
++|+||.+ ...+...+ +++|+. |+.++ + +++....||+|+.|..++++++++|++++
T Consensus 48 l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l 124 (161)
T TIGR01261 48 FVMVTNQDGLGTPSFPQADFDGPHNLMLQIF-RSQGII--FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSY 124 (161)
T ss_pred EEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHCCCc--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 58999973 44455444 888996 87654 4 47888999999999999999999999999
Q ss_pred EEecCHhhHHHHHHcCCEEEEecCC
Q 023972 61 VIEDSVIGVVAGKAAGMEVVAVPSL 85 (274)
Q Consensus 61 vvgD~~~di~aA~~aGi~vi~V~~~ 85 (274)
||||+..|+++|+++|+.++++.+.
T Consensus 125 ~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 125 VIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred EEeCCHHHHHHHHHCCCeEEEEChh
Confidence 9999999999999999999999875
No 55
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.16 E-value=1.3e-10 Score=94.40 Aligned_cols=72 Identities=31% Similarity=0.555 Sum_probs=66.4
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG 76 (274)
++|+||+.+..+...+ +++ +..+|+.++++++.. .||+|+.|..++++++++| +|++|||+..|+++|+++|
T Consensus 83 ~~i~T~~~~~~~~~~~-~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 83 LGIISNGSLRAQKLLL-RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred EEEEeCCchHHHHHHH-HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 4899999999998766 666 888999999999988 9999999999999999999 9999999999999999987
No 56
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.16 E-value=7.3e-11 Score=98.40 Aligned_cols=85 Identities=16% Similarity=0.032 Sum_probs=73.5
Q ss_pred CEEEcCC-ChHHHHHHHHHHcCCC---------CCCcEEEecCCCCCCCCCHHHHHHHHHHh--CCCCCcEEEEecCHhh
Q 023972 1 MALASNS-HRATIESKISYQHGWN---------ESFSVIVGSDEVRTGKPSPDIFLEAAKRL--NMEPSSSLVIEDSVIG 68 (274)
Q Consensus 1 laIvSn~-~~~~~~~~l~~~~gl~---------~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l--~v~p~~~vvvgD~~~d 68 (274)
++|+||+ ....+...+ +.+++. ++|+.++++++....||.++.+..+.+.+ +++|++|+||||+..|
T Consensus 64 l~I~Sn~~~~~~~~~~L-~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~d 142 (174)
T TIGR01685 64 LATASWNDVPEWAYEIL-GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDN 142 (174)
T ss_pred EEEEeCCCChHHHHHHH-HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHh
Confidence 5899998 788777656 888998 99999999998777788888776666666 7999999999999999
Q ss_pred HHHHHHcCCEEEEecCCC
Q 023972 69 VVAGKAAGMEVVAVPSLP 86 (274)
Q Consensus 69 i~aA~~aGi~vi~V~~~~ 86 (274)
+++|+++|+.++++.++.
T Consensus 143 i~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 143 VREVWGYGVTSCYCPSGM 160 (174)
T ss_pred HHHHHHhCCEEEEcCCCc
Confidence 999999999999997753
No 57
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.12 E-value=3.5e-10 Score=89.69 Aligned_cols=79 Identities=25% Similarity=0.509 Sum_probs=66.2
Q ss_pred CEEEcCCC--------hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHh-CCCCCcEEEEec-CHhhHH
Q 023972 1 MALASNSH--------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIED-SVIGVV 70 (274)
Q Consensus 1 laIvSn~~--------~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l-~v~p~~~vvvgD-~~~di~ 70 (274)
++|+||+. ...+...+ +++++. |+.++.+. ...||+|+.|..+++++ +++|++++|||| +..|+.
T Consensus 44 l~i~Sn~~~~~~~~~~~~~~~~~l-~~~~l~--~~~~~~~~--~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~ 118 (132)
T TIGR01662 44 VVIVTNQSGIGRGKFSSGRVARRL-EELGVP--IDVLYACP--HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQ 118 (132)
T ss_pred EEEEECCccccccHHHHHHHHHHH-HHCCCC--EEEEEECC--CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHH
Confidence 57999998 77777656 788885 44444444 57899999999999999 599999999999 789999
Q ss_pred HHHHcCCEEEEecC
Q 023972 71 AGKAAGMEVVAVPS 84 (274)
Q Consensus 71 aA~~aGi~vi~V~~ 84 (274)
+|+++|+.++++.+
T Consensus 119 ~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 119 AAKRAGLAFILVAP 132 (132)
T ss_pred HHHHCCCeEEEeeC
Confidence 99999999999863
No 58
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.11 E-value=5e-10 Score=96.91 Aligned_cols=83 Identities=17% Similarity=0.171 Sum_probs=70.3
Q ss_pred CEEEcCCChHHHHHHHHHHc---CCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972 1 MALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~---gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi 77 (274)
++|+||++.......+ ++. ++.++|+.++... . ..||+|+.|..++++++++|++|++|||+..|+++|+++|+
T Consensus 114 l~I~Sn~s~~~~~~~~-~~~~~~~L~~~f~~~fd~~-~-g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~ 190 (220)
T TIGR01691 114 LAVYSSGSVPAQKLLF-GHSDAGNLTPYFSGYFDTT-V-GLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGL 190 (220)
T ss_pred EEEEeCCCHHHHHHHH-hhccccchhhhcceEEEeC-c-ccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCC
Confidence 5899999998877655 664 6777888766432 2 37999999999999999999999999999999999999999
Q ss_pred EEEEecCCC
Q 023972 78 EVVAVPSLP 86 (274)
Q Consensus 78 ~vi~V~~~~ 86 (274)
.++++.+..
T Consensus 191 ~ti~v~r~g 199 (220)
T TIGR01691 191 HTGQLVRPG 199 (220)
T ss_pred EEEEEECCC
Confidence 999997643
No 59
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.08 E-value=5e-10 Score=80.38 Aligned_cols=68 Identities=32% Similarity=0.496 Sum_probs=59.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCCcEEEEecC-HhhHHHHHHcCCEEEEecCCCCcccc----cccccEEEecccc
Q 023972 37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLD 104 (274)
Q Consensus 37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~-~~di~aA~~aGi~vi~V~~~~~~~~~----iSss~~ii~~l~e 104 (274)
.+||+|.+|..+++++++++++++||||+ ..|+++|+++|+.++.|.++....+. ...++.+++++.+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 57999999999999999999999999999 77999999999999999997654433 2467788888865
No 60
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
Probab=99.03 E-value=9.5e-11 Score=98.38 Aligned_cols=99 Identities=24% Similarity=0.316 Sum_probs=76.3
Q ss_pred CcEEEecC-CCCCCCCCHHHHHHH-HHHhCCCCCcEEEEecCHhhH----------HHHHHcCCEEEEecCCCCcccccc
Q 023972 26 FSVIVGSD-EVRTGKPSPDIFLEA-AKRLNMEPSSSLVIEDSVIGV----------VAGKAAGMEVVAVPSLPKQTHRYT 93 (274)
Q Consensus 26 Fd~v~~~~-~~~~~KP~pe~f~~~-l~~l~v~p~~~vvvgD~~~di----------~aA~~aGi~vi~V~~~~~~~~~iS 93 (274)
+|.++... +-...+.+|+.|++. +..+ +++.++++.|+.||. +.+.+.|+.++.++....++..+|
T Consensus 70 vd~v~~~~f~~~~~~~s~~~Fi~~il~~~--~~~~ivvG~Df~FG~~~~g~~~~L~~~~~~~g~~v~~v~~~~~~~~~iS 147 (180)
T cd02064 70 VDYLLVLPFDKEFASLSAEEFVEDLLVKL--NAKHVVVGFDFRFGKGRSGDAELLKELGKKYGFEVTVVPPVTLDGERVS 147 (180)
T ss_pred CCEEEEeCCCHHHHcCCHHHHHHHHHhhc--CCeEEEEccCCCCCCCCCCCHHHHHHhhhhcCcEEEEeCcEecCCcEEc
Confidence 56655532 323567899999984 4444 557788889998862 346788999999998766666788
Q ss_pred cccEEEeccccccccccCCCCCCCcccCCCCCCceeEeEEEEec
Q 023972 94 AADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKG 137 (274)
Q Consensus 94 ss~~ii~~l~e~~~~~~~l~~~~~~~a~~lLgrpy~i~G~Vv~G 137 (274)
|+ .|++.+.++++.. |+.||||||+++|+|+||
T Consensus 148 ST-~IR~~i~~G~i~~----------an~lLg~~y~~~g~V~~G 180 (180)
T cd02064 148 ST-RIREALAEGDVEL----------ANELLGRPYSIEGRVVHG 180 (180)
T ss_pred HH-HHHHHHHhCCHHH----------HHHHcCCCcEEEEEEeeC
Confidence 85 7778888899986 999999999999999998
No 61
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=98.93 E-value=2.5e-09 Score=88.87 Aligned_cols=80 Identities=18% Similarity=0.239 Sum_probs=64.8
Q ss_pred CEEEcCCC-hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCE
Q 023972 1 MALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGME 78 (274)
Q Consensus 1 laIvSn~~-~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~ 78 (274)
++|+||++ ...+.. +.+.+|+..++ ...||+|+.|..+++++++++++++||||+. .|+.+|+++|+.
T Consensus 62 l~I~Sn~~~~~~~~~-~~~~~gl~~~~---------~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 62 LLIVSNNAGEQRAKA-VEKALGIPVLP---------HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EEEEeCCchHHHHHH-HHHHcCCEEEc---------CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 47999998 455543 43666764321 3469999999999999999999999999998 599999999999
Q ss_pred EEEecCCCCccc
Q 023972 79 VVAVPSLPKQTH 90 (274)
Q Consensus 79 vi~V~~~~~~~~ 90 (274)
++++.++.....
T Consensus 132 ~i~v~~g~~~~~ 143 (170)
T TIGR01668 132 TILVEPLVHPDQ 143 (170)
T ss_pred EEEEccCcCCcc
Confidence 999988765443
No 62
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.92 E-value=2.9e-09 Score=95.98 Aligned_cols=84 Identities=15% Similarity=0.080 Sum_probs=75.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCC-CCcEEEecC-------CCCCCCCCHHHHHHHHHHhCC-CCCcEEEEecCHhhHHH
Q 023972 1 MALASNSHRATIESKISYQHGWNE-SFSVIVGSD-------EVRTGKPSPDIFLEAAKRLNM-EPSSSLVIEDSVIGVVA 71 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~-~Fd~v~~~~-------~~~~~KP~pe~f~~~l~~l~v-~p~~~vvvgD~~~di~a 71 (274)
++|+||.+.......+ +.+++.. +|+.+++.+ +....||+|+.+..++++++. .+++|+||||+..|+++
T Consensus 206 i~i~T~r~~~~~~~~l-~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~ 284 (300)
T PHA02530 206 IIVVSGRDGVCEEDTV-EWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDM 284 (300)
T ss_pred EEEEeCCChhhHHHHH-HHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHH
Confidence 4799999999888666 8889987 999999988 455789999999999999888 57999999999999999
Q ss_pred HHHcCCEEEEecCC
Q 023972 72 GKAAGMEVVAVPSL 85 (274)
Q Consensus 72 A~~aGi~vi~V~~~ 85 (274)
|+++|+.++.|.++
T Consensus 285 a~~~Gi~~i~v~~g 298 (300)
T PHA02530 285 WRRIGLECWQVAPG 298 (300)
T ss_pred HHHhCCeEEEecCC
Confidence 99999999999775
No 63
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.91 E-value=3.4e-09 Score=87.81 Aligned_cols=78 Identities=15% Similarity=0.201 Sum_probs=64.4
Q ss_pred CEEEcCCChH------------HHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC--CCCCcEEEEecCH
Q 023972 1 MALASNSHRA------------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSV 66 (274)
Q Consensus 1 laIvSn~~~~------------~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~--v~p~~~vvvgD~~ 66 (274)
++|+||++.. .+...+ +++|+. ++.++++++....||+|+.|..++++++ +++++++||||+.
T Consensus 61 l~I~TN~~~~~~~~~~~~~~~~~i~~~l-~~~gl~--~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 61 IVIFTNQSGIGRGKLSAESFKNKIEAFL-EKLKVP--IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred EEEEeCCcccccCcccHHHHHHHHHHHH-HHcCCC--EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 5899998763 344444 888884 3667777766678999999999999999 9999999999996
Q ss_pred --------hhHHHHHHcCCEEEE
Q 023972 67 --------IGVVAGKAAGMEVVA 81 (274)
Q Consensus 67 --------~di~aA~~aGi~vi~ 81 (274)
.|+++|+++|+.+++
T Consensus 138 ~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 138 GRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred CCCCCCchhHHHHHHHCCCCcCC
Confidence 599999999998864
No 64
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.91 E-value=1.4e-09 Score=88.28 Aligned_cols=76 Identities=12% Similarity=-0.011 Sum_probs=68.1
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCC-CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~-~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v 79 (274)
++|+||+.+..+...+ +++++.. +|+.+++++++...||. |++++++++.+|++||||||+..|+.+|.++|+.+
T Consensus 63 l~I~Ts~~~~~~~~il-~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 63 LVVFTAGLRMYADPVL-DLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred EEEEeCCcHHHHHHHH-HHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 5899999999999766 8888865 56999999999999997 88999999999999999999999999999998765
Q ss_pred E
Q 023972 80 V 80 (274)
Q Consensus 80 i 80 (274)
-
T Consensus 139 ~ 139 (148)
T smart00577 139 K 139 (148)
T ss_pred c
Confidence 3
No 65
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.91 E-value=3.1e-09 Score=89.90 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=71.7
Q ss_pred EEEcCCChHHHHHHHHHHcCCCC----CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc--
Q 023972 2 ALASNSHRATIESKISYQHGWNE----SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-- 75 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~----~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a-- 75 (274)
.++||++.......+ +++++.. +|+.++++++. ||+|+.|..++++++ |+++++|||+..|+++|+++
T Consensus 93 ~i~Tn~~~~~~~~~~-~~~~l~~~f~~~f~~i~~~~~~---~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~ 166 (197)
T PHA02597 93 VAVTALGDSIDALLN-RQFNLNALFPGAFSEVLMCGHD---ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALS 166 (197)
T ss_pred EEEeCCccchhHHHH-hhCCHHHhCCCcccEEEEeccC---cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHc
Confidence 577887766554333 6677764 56778887773 667899999999999 78999999999999999999
Q ss_pred CCEEEEecCCCCcccccccccEEEeccccc
Q 023972 76 GMEVVAVPSLPKQTHRYTAADEVINSLLDL 105 (274)
Q Consensus 76 Gi~vi~V~~~~~~~~~iSss~~ii~~l~e~ 105 (274)
|++++++.++.. .....+++++.++.++
T Consensus 167 Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~ 194 (197)
T PHA02597 167 QLPVIHMLRGER--DHIPKLAHRVKSWNDI 194 (197)
T ss_pred CCcEEEecchhh--ccccchhhhhccHHHH
Confidence 999999988754 2222333566666553
No 66
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.90 E-value=5.5e-10 Score=100.01 Aligned_cols=104 Identities=25% Similarity=0.320 Sum_probs=76.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEe---cCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVG---SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAG 76 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~---~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aG 76 (274)
++|+||.+............++..+|+.+.+ .+....+||+|+.|..++++++++|++++||||+. .|+++|+++|
T Consensus 161 ~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aG 240 (279)
T TIGR01452 161 LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCG 240 (279)
T ss_pred EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcC
Confidence 3689998875432111134466667776543 34456789999999999999999999999999995 7999999999
Q ss_pred CEEEEecCCCCccccc----------ccccEEEecccc
Q 023972 77 MEVVAVPSLPKQTHRY----------TAADEVINSLLD 104 (274)
Q Consensus 77 i~vi~V~~~~~~~~~i----------Sss~~ii~~l~e 104 (274)
+.++.|.++....+.. ..++++++++.+
T Consensus 241 i~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~ 278 (279)
T TIGR01452 241 MTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLAD 278 (279)
T ss_pred CcEEEECCCCCCHHHHHhhhcccccCCCCCEEeccccc
Confidence 9999998875433221 235677776654
No 67
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.89 E-value=6.1e-09 Score=88.15 Aligned_cols=82 Identities=21% Similarity=0.325 Sum_probs=75.1
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCC------CCCCCHHHHHHHHHHhCCC-CCcEEEEecCHhhHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVR------TGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKA 74 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~------~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~~~di~aA~~ 74 (274)
-+.||+.+..+...| +.+|+.++||.++|++-.. ..||+++.|..+++..|++ |.++++++|+...+++|++
T Consensus 118 ~~FTNa~k~HA~r~L-k~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~ 196 (244)
T KOG3109|consen 118 WIFTNAYKVHAIRIL-KKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKE 196 (244)
T ss_pred EEecCCcHHHHHHHH-HHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHh
Confidence 478999999999888 8999999999999987433 5799999999999999998 9999999999999999999
Q ss_pred cCCEEEEecC
Q 023972 75 AGMEVVAVPS 84 (274)
Q Consensus 75 aGi~vi~V~~ 84 (274)
.|+.++++..
T Consensus 197 vGl~tvlv~~ 206 (244)
T KOG3109|consen 197 VGLKTVLVGR 206 (244)
T ss_pred ccceeEEEEe
Confidence 9999998865
No 68
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.84 E-value=1.1e-09 Score=97.02 Aligned_cols=104 Identities=20% Similarity=0.221 Sum_probs=79.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCC---CCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAG 76 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~---~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aG 76 (274)
++|+||.++......+ ...|+..+|+.+.++.... .+||+|++|..++++++++|++++||||+. .|+.+|+++|
T Consensus 139 ~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G 217 (257)
T TIGR01458 139 LLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCG 217 (257)
T ss_pred EEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcC
Confidence 3678888777655444 5567888888777654433 379999999999999999999999999996 7999999999
Q ss_pred CEEEEecCCCCccc----ccccccEEEeccccc
Q 023972 77 MEVVAVPSLPKQTH----RYTAADEVINSLLDL 105 (274)
Q Consensus 77 i~vi~V~~~~~~~~----~iSss~~ii~~l~e~ 105 (274)
+.+++|.++..... ....++.+++++.++
T Consensus 218 ~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el 250 (257)
T TIGR01458 218 MRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA 250 (257)
T ss_pred CeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence 99999988642111 123456778777654
No 69
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.79 E-value=3.4e-08 Score=91.05 Aligned_cols=82 Identities=16% Similarity=0.224 Sum_probs=67.2
Q ss_pred CEEEcCC---------------ChHHHHHHHHHHcCCCCCCcEEE-e----cCCCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972 1 MALASNS---------------HRATIESKISYQHGWNESFSVIV-G----SDEVRTGKPSPDIFLEAAKRLNMEPSSSL 60 (274)
Q Consensus 1 laIvSn~---------------~~~~~~~~l~~~~gl~~~Fd~v~-~----~~~~~~~KP~pe~f~~~l~~l~v~p~~~v 60 (274)
++|+||. ....+...+ +.+++ +|+.++ + +++...+||+|++|..++++++++|++++
T Consensus 49 L~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL-~~~gl--~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~sv 125 (354)
T PRK05446 49 LVMVTNQDGLGTDSFPQEDFDPPHNLMMQIF-ESQGI--KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSY 125 (354)
T ss_pred EEEEECCccccCccccHHHHhhHHHHHHHHH-HHcCC--ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 5799995 244444434 77788 477654 3 35667899999999999999999999999
Q ss_pred EEecCHhhHHHHHHcCCEEEEecCC
Q 023972 61 VIEDSVIGVVAGKAAGMEVVAVPSL 85 (274)
Q Consensus 61 vvgD~~~di~aA~~aGi~vi~V~~~ 85 (274)
||||+..|+++|+++|++++++++.
T Consensus 126 mIGDs~sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 126 VIGDRETDVQLAENMGIKGIRYARE 150 (354)
T ss_pred EEcCCHHHHHHHHHCCCeEEEEECC
Confidence 9999999999999999999999764
No 70
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.73 E-value=2.3e-08 Score=83.09 Aligned_cols=74 Identities=11% Similarity=0.205 Sum_probs=66.0
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||++...+...+ +++|+..+|+.+ ||+|+.|..+++++++++++++++||+.+|+.+++.+|+.+.
T Consensus 53 laIiT~k~~~~~~~~l-~~lgi~~~f~~~---------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a 122 (169)
T TIGR02726 53 VAIITSKKSGAVRHRA-EELKIKRFHEGI---------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA 122 (169)
T ss_pred EEEEECCCcHHHHHHH-HHCCCcEEEecC---------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 5899999999998767 889999888742 799999999999999999999999999999999999999876
Q ss_pred EecC
Q 023972 81 AVPS 84 (274)
Q Consensus 81 ~V~~ 84 (274)
.-+.
T Consensus 123 m~nA 126 (169)
T TIGR02726 123 VGDA 126 (169)
T ss_pred CcCc
Confidence 6544
No 71
>PLN02645 phosphoglycolate phosphatase
Probab=98.73 E-value=2.4e-09 Score=97.38 Aligned_cols=104 Identities=21% Similarity=0.254 Sum_probs=78.9
Q ss_pred CEEEcCCChHH-HHHHHHHHcCCCCCCcEEEecCCCC---CCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHc
Q 023972 1 MALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAA 75 (274)
Q Consensus 1 laIvSn~~~~~-~~~~l~~~~gl~~~Fd~v~~~~~~~---~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~a 75 (274)
+.|+||.+... ....+ ...|...+|+.+.++.... .+||+|.+|..+++++++++++++||||+. .|+++|+++
T Consensus 189 ~~i~tn~d~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~a 267 (311)
T PLN02645 189 LFIATNRDAVTHLTDAQ-EWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNG 267 (311)
T ss_pred EEEEeCCCCCCCCCCCC-CccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHc
Confidence 36889988753 22222 4457777888877766533 369999999999999999999999999997 899999999
Q ss_pred CCEEEEecCCCCccccc------ccccEEEeccccc
Q 023972 76 GMEVVAVPSLPKQTHRY------TAADEVINSLLDL 105 (274)
Q Consensus 76 Gi~vi~V~~~~~~~~~i------Sss~~ii~~l~e~ 105 (274)
|+++++|.++....... ..++.+++++.++
T Consensus 268 G~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 268 GCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred CCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 99999998875433221 2356788777654
No 72
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=98.71 E-value=4e-08 Score=79.97 Aligned_cols=79 Identities=25% Similarity=0.424 Sum_probs=67.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~v 79 (274)
+.|+||..+.-+.... +.+|+ +++. ...||.+..|.++++++++++++|+||||..+ |+.+|+.+|+++
T Consensus 65 v~vvSNn~e~RV~~~~-~~l~v----~fi~-----~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~t 134 (175)
T COG2179 65 VVVVSNNKESRVARAA-EKLGV----PFIY-----RAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRT 134 (175)
T ss_pred EEEEeCCCHHHHHhhh-hhcCC----ceee-----cccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEE
Confidence 3689999999888655 77776 3333 56899999999999999999999999999998 999999999999
Q ss_pred EEecCCCCcc
Q 023972 80 VAVPSLPKQT 89 (274)
Q Consensus 80 i~V~~~~~~~ 89 (274)
|.|.+....+
T Consensus 135 IlV~Pl~~~d 144 (175)
T COG2179 135 ILVEPLVAPD 144 (175)
T ss_pred EEEEEecccc
Confidence 9998864433
No 73
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.65 E-value=1.4e-07 Score=82.41 Aligned_cols=78 Identities=13% Similarity=0.098 Sum_probs=64.2
Q ss_pred CEEEcCC----ChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972 1 MALASNS----HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76 (274)
Q Consensus 1 laIvSn~----~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG 76 (274)
++|+||+ .+..+.. +++++|+..+|+.++++++....||+|+. +++++++ ++++||+..|+.+|+++|
T Consensus 133 i~iVTnr~~~k~~~~a~~-ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~---~l~~~~i----~i~vGDs~~DI~aAk~AG 204 (237)
T TIGR01672 133 IFFVTGRTPGKTDTVSKT-LAKNFHIPAMNPVIFAGDKPGQYQYTKTQ---WIQDKNI----RIHYGDSDNDITAAKEAG 204 (237)
T ss_pred EEEEeCCCCCcCHHHHHH-HHHHhCCchheeEEECCCCCCCCCCCHHH---HHHhCCC----eEEEeCCHHHHHHHHHCC
Confidence 5799998 5555554 55889999999999999988788898864 4455654 799999999999999999
Q ss_pred CEEEEecCCC
Q 023972 77 MEVVAVPSLP 86 (274)
Q Consensus 77 i~vi~V~~~~ 86 (274)
++++.+.++.
T Consensus 205 i~~I~V~~g~ 214 (237)
T TIGR01672 205 ARGIRILRAS 214 (237)
T ss_pred CCEEEEEecC
Confidence 9999998754
No 74
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.64 E-value=1.1e-07 Score=73.91 Aligned_cols=81 Identities=33% Similarity=0.463 Sum_probs=72.0
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCC----------------CCCHHHHHHHHHHhCCCCCcEEEEec
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------------KPSPDIFLEAAKRLNMEPSSSLVIED 64 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~----------------KP~pe~f~~~l~~l~v~p~~~vvvgD 64 (274)
++|+||+.+..+...+ +.+++..+|+.++++...... ||.++.+..++++++.++++++++||
T Consensus 43 i~ivS~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD 121 (139)
T cd01427 43 LALATNKSRREVLELL-EELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGD 121 (139)
T ss_pred EEEEeCchHHHHHHHH-HHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCC
Confidence 4799999999998777 778998899999988765555 99999999999999998999999999
Q ss_pred CHhhHHHHHHcCCEEEEe
Q 023972 65 SVIGVVAGKAAGMEVVAV 82 (274)
Q Consensus 65 ~~~di~aA~~aGi~vi~V 82 (274)
+..|+++++++|+.+++|
T Consensus 122 ~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 122 SLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred CHHHHHHHHHcCCceeeC
Confidence 999999999999998764
No 75
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.55 E-value=2.6e-07 Score=77.89 Aligned_cols=83 Identities=13% Similarity=0.038 Sum_probs=67.4
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCH----------HHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP----------DIFLEAAKRLNMEPSSSLVIEDSVIGVV 70 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~p----------e~f~~~l~~l~v~p~~~vvvgD~~~di~ 70 (274)
++|+||+....+...+ +++|+..+|+.++..++.+..+|++ +.+..+++++++++++++++||+..|+.
T Consensus 99 ~~IvS~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~ 177 (201)
T TIGR01491 99 TAIVSGGIMCLAKKVA-EKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLP 177 (201)
T ss_pred EEEEeCCcHHHHHHHH-HHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHH
Confidence 4799999999888766 8889988888777665544444432 5677788889999999999999999999
Q ss_pred HHHHcCCEEEEecC
Q 023972 71 AGKAAGMEVVAVPS 84 (274)
Q Consensus 71 aA~~aGi~vi~V~~ 84 (274)
+|+.+|+.++..+.
T Consensus 178 ~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 178 MFEVADISISLGDE 191 (201)
T ss_pred HHHhcCCeEEECCC
Confidence 99999998766554
No 76
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.53 E-value=3.1e-08 Score=87.29 Aligned_cols=78 Identities=27% Similarity=0.393 Sum_probs=61.0
Q ss_pred CcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEEEEecCCCCccccc----ccccEEEe
Q 023972 26 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVIN 100 (274)
Q Consensus 26 Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~vi~V~~~~~~~~~i----Sss~~ii~ 100 (274)
++.+.+.+.+...||+|++|..+++++++++++++||||+. .|+.+|+++|+++++|.++....... ..++.+++
T Consensus 165 i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~ 244 (249)
T TIGR01457 165 LEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVS 244 (249)
T ss_pred HHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeC
Confidence 44455556667789999999999999999999999999997 69999999999999998875432211 23456666
Q ss_pred ccc
Q 023972 101 SLL 103 (274)
Q Consensus 101 ~l~ 103 (274)
++.
T Consensus 245 ~l~ 247 (249)
T TIGR01457 245 SLA 247 (249)
T ss_pred Chh
Confidence 554
No 77
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.53 E-value=1.5e-07 Score=74.48 Aligned_cols=69 Identities=22% Similarity=0.171 Sum_probs=58.3
Q ss_pred CEEEcCC-ChHHHHHHHHHHcC-------CCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC--CCCCcEEEEecCHhhHH
Q 023972 1 MALASNS-HRATIESKISYQHG-------WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVV 70 (274)
Q Consensus 1 laIvSn~-~~~~~~~~l~~~~g-------l~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~--v~p~~~vvvgD~~~di~ 70 (274)
++|+||+ .+..+...+ ++++ +.++|+.++++++ +|+|+.|..+++++| +.|++|+||||+..++.
T Consensus 48 l~i~Sn~~~~~~~~~~l-~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~ 122 (128)
T TIGR01681 48 LALASYNDDPHVAYELL-KIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNE 122 (128)
T ss_pred EEEEeCCCCHHHHHHHH-HhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHH
Confidence 5899999 777666555 7778 8899999988864 588999999999999 99999999999999877
Q ss_pred HHHH
Q 023972 71 AGKA 74 (274)
Q Consensus 71 aA~~ 74 (274)
..++
T Consensus 123 ~~~~ 126 (128)
T TIGR01681 123 EVDY 126 (128)
T ss_pred HHHh
Confidence 6544
No 78
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.51 E-value=4.9e-08 Score=85.52 Aligned_cols=81 Identities=25% Similarity=0.395 Sum_probs=66.4
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEE--EecCCCCCCCCCHHHHHHHHHHhCCC-CCcEEEEecC-HhhHHHHHHcCC
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVI--VGSDEVRTGKPSPDIFLEAAKRLNME-PSSSLVIEDS-VIGVVAGKAAGM 77 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v--~~~~~~~~~KP~pe~f~~~l~~l~v~-p~~~vvvgD~-~~di~aA~~aGi 77 (274)
.|+||.+.......+ .+.+...+|..+ .+.+....+||+|++|..++++++.. +++++||||+ ..|+.+|+++|+
T Consensus 157 ~i~tN~d~~~~~~~~-~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~ 235 (242)
T TIGR01459 157 NICANPDRGINQHGI-YRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGI 235 (242)
T ss_pred EEEECCCEeccCCCc-eEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCC
Confidence 378999888775444 666777777754 56666668999999999999999875 5789999999 589999999999
Q ss_pred EEEEec
Q 023972 78 EVVAVP 83 (274)
Q Consensus 78 ~vi~V~ 83 (274)
.+++|.
T Consensus 236 ~~i~v~ 241 (242)
T TIGR01459 236 DTALVL 241 (242)
T ss_pred eEEEEe
Confidence 999874
No 79
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.51 E-value=5.9e-07 Score=77.05 Aligned_cols=80 Identities=15% Similarity=0.197 Sum_probs=64.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEE-------ec---CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIV-------GS---DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 70 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~-------~~---~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~ 70 (274)
++|+||+....+...+ +++|+..+|+..+ ++ ......+|.|+.|..++++++++|++|++|||+..|+.
T Consensus 104 ~~IvS~~~~~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~ 182 (219)
T TIGR00338 104 VAVISGGFDLFAEHVK-DKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLS 182 (219)
T ss_pred EEEECCCcHHHHHHHH-HHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHH
Confidence 4899999999888666 8889988885322 11 12233567899999999999999999999999999999
Q ss_pred HHHHcCCEEEE
Q 023972 71 AGKAAGMEVVA 81 (274)
Q Consensus 71 aA~~aGi~vi~ 81 (274)
+|+++|+.+..
T Consensus 183 aa~~ag~~i~~ 193 (219)
T TIGR00338 183 MIKAAGLGIAF 193 (219)
T ss_pred HHHhCCCeEEe
Confidence 99999998643
No 80
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.50 E-value=2.3e-07 Score=75.78 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=69.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||.+...+...+ +++|+..+|+. .+|.|+.+.++++++++++++|+++||+.+|+.+++++|+. +
T Consensus 47 i~IvTn~~~~~~~~~l-~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~ 115 (154)
T TIGR01670 47 VAIITGRKAKLVEDRC-KTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-V 115 (154)
T ss_pred EEEEECCCCHHHHHHH-HHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-E
Confidence 4799999999888766 88899877752 27889999999999999999999999999999999999998 5
Q ss_pred EecCCCCcccccccccEEEecc
Q 023972 81 AVPSLPKQTHRYTAADEVINSL 102 (274)
Q Consensus 81 ~V~~~~~~~~~iSss~~ii~~l 102 (274)
.+..... .....++.++.+.
T Consensus 116 ~v~~~~~--~~~~~a~~i~~~~ 135 (154)
T TIGR01670 116 AVADAHP--LLIPRADYVTRIA 135 (154)
T ss_pred ecCCcCH--HHHHhCCEEecCC
Confidence 5544322 2223344555443
No 81
>PRK10444 UMP phosphatase; Provisional
Probab=98.45 E-value=1.8e-07 Score=82.42 Aligned_cols=77 Identities=25% Similarity=0.371 Sum_probs=62.1
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH-hhHHHHHHcCCEEEEecCCCCccccc----ccccEEEeccc
Q 023972 29 IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLL 103 (274)
Q Consensus 29 v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~-~di~aA~~aGi~vi~V~~~~~~~~~i----Sss~~ii~~l~ 103 (274)
+.+.+....+||+|++|..++++++++|++++||||+. .|+.+|+++|+.+++|.++....... ..++.+++++.
T Consensus 164 ~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~ 243 (248)
T PRK10444 164 ISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVA 243 (248)
T ss_pred HhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHH
Confidence 34444555689999999999999999999999999997 79999999999999998875443322 34667888776
Q ss_pred cc
Q 023972 104 DL 105 (274)
Q Consensus 104 e~ 105 (274)
++
T Consensus 244 el 245 (248)
T PRK10444 244 DI 245 (248)
T ss_pred Hh
Confidence 64
No 82
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.35 E-value=1e-06 Score=74.00 Aligned_cols=70 Identities=17% Similarity=0.299 Sum_probs=60.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+||.+...+...+ +.+|+..+|+ + .++.++.+..+++++++++++++||||+..|+.+++++|+.++
T Consensus 67 v~I~T~~~~~~v~~~l-~~lgl~~~f~---g------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~ 136 (183)
T PRK09484 67 VAIITGRKSKLVEDRM-TTLGITHLYQ---G------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA 136 (183)
T ss_pred EEEEeCCCcHHHHHHH-HHcCCceeec---C------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence 4799999999888666 8889887775 1 2456799999999999999999999999999999999999954
No 83
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.31 E-value=1.6e-06 Score=79.14 Aligned_cols=72 Identities=22% Similarity=0.158 Sum_probs=64.6
Q ss_pred CEEEcCCChHHHHHHHHHH----cCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972 1 MALASNSHRATIESKISYQ----HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~----~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG 76 (274)
++|+||+++..+...| ++ +++.++|+.+.+. +||+|+.+..+++++++.++++|+|||+.+++..++++.
T Consensus 50 lai~S~n~~~~a~~~l-~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 50 LALASKNDEDDAKKVF-ERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred EEEEcCCCHHHHHHHH-HhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHC
Confidence 5899999999998777 77 7899999988665 689999999999999999999999999999999999877
Q ss_pred CE
Q 023972 77 ME 78 (274)
Q Consensus 77 i~ 78 (274)
-.
T Consensus 124 p~ 125 (320)
T TIGR01686 124 PV 125 (320)
T ss_pred CC
Confidence 64
No 84
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.23 E-value=7.2e-06 Score=71.71 Aligned_cols=77 Identities=14% Similarity=0.186 Sum_probs=60.2
Q ss_pred CEEEcCCC----hHHHHHHHHHHcCC--CCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHH
Q 023972 1 MALASNSH----RATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 74 (274)
Q Consensus 1 laIvSn~~----~~~~~~~l~~~~gl--~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~ 74 (274)
++++||.+ ...+. .|.+.+|+ .++|+.+++.++. .||++.. .++++++ ++++||+..|+.+|++
T Consensus 133 I~iVTnR~~~k~~~t~~-~Llk~~gip~~~~f~vil~gd~~--~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~ 202 (237)
T PRK11009 133 IYFITGRTATKTETVSK-TLADDFHIPADNMNPVIFAGDKP--GQYTKTQ---WLKKKNI----RIFYGDSDNDITAARE 202 (237)
T ss_pred EEEEeCCCCcccHHHHH-HHHHHcCCCcccceeEEEcCCCC--CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHH
Confidence 57899953 44444 56577899 8999999988763 6788765 4445554 8999999999999999
Q ss_pred cCCEEEEecCCCC
Q 023972 75 AGMEVVAVPSLPK 87 (274)
Q Consensus 75 aGi~vi~V~~~~~ 87 (274)
+|+.++.+.++..
T Consensus 203 AGi~~I~v~~G~~ 215 (237)
T PRK11009 203 AGARGIRILRAAN 215 (237)
T ss_pred cCCcEEEEecCCC
Confidence 9999999988643
No 85
>PLN02954 phosphoserine phosphatase
Probab=98.19 E-value=8e-06 Score=70.24 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=69.9
Q ss_pred CEEEcCCChHHHHHHHHHHcCCC--CCCcEEE-e-------cCC----CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH
Q 023972 1 MALASNSHRATIESKISYQHGWN--ESFSVIV-G-------SDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 66 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~--~~Fd~v~-~-------~~~----~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~ 66 (274)
++|+|++.+..+...+ +.+|+. .+|+..+ . +.+ ....++.|+.+..++++++. +++++|||+.
T Consensus 103 ~~IvS~~~~~~i~~~l-~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~ 179 (224)
T PLN02954 103 VYLVSGGFRQMIAPVA-AILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGA 179 (224)
T ss_pred EEEECCCcHHHHHHHH-HHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCH
Confidence 4799999999998766 888986 3564311 1 111 12356778888888888875 6999999999
Q ss_pred hhHHHHHHcCCEEEEecCCCCccc-ccccccEEEeccccc
Q 023972 67 IGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDL 105 (274)
Q Consensus 67 ~di~aA~~aGi~vi~V~~~~~~~~-~iSss~~ii~~l~e~ 105 (274)
.|+.+|+++|+.++....+..... ....++.++.++.++
T Consensus 180 ~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 180 TDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred HHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 999999998888766533222111 123356777777653
No 86
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.12 E-value=6.1e-06 Score=71.11 Aligned_cols=77 Identities=14% Similarity=0.087 Sum_probs=60.1
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCC--CC--cEEEecCCCCCCCCCHHH----------HHHHHHHhCCCCCcEEEEecCH
Q 023972 1 MALASNSHRATIESKISYQHGWNE--SF--SVIVGSDEVRTGKPSPDI----------FLEAAKRLNMEPSSSLVIEDSV 66 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~--~F--d~v~~~~~~~~~KP~pe~----------f~~~l~~l~v~p~~~vvvgD~~ 66 (274)
++|+||+.+..+...| +++ +.. .+ +..+.++.....||+|.. ...++++++..+.++++|||+.
T Consensus 93 ~~IvS~~~~~~i~~il-~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~ 170 (219)
T PRK09552 93 FYVVSGGMDFFVYPLL-QGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSI 170 (219)
T ss_pred EEEECCCcHHHHHHHH-HHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCH
Confidence 5899999999888766 666 543 22 344555666677888764 3568888999999999999999
Q ss_pred hhHHHHHHcCCEE
Q 023972 67 IGVVAGKAAGMEV 79 (274)
Q Consensus 67 ~di~aA~~aGi~v 79 (274)
.|+.+|+++|+.+
T Consensus 171 ~Di~aa~~Ag~~~ 183 (219)
T PRK09552 171 TDLEAAKQADKVF 183 (219)
T ss_pred HHHHHHHHCCcce
Confidence 9999999999943
No 87
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.08 E-value=1e-05 Score=68.54 Aligned_cols=70 Identities=34% Similarity=0.488 Sum_probs=58.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG 76 (274)
++|+|+.....+.... +.+|+ ++.++.+... .||++..|.++++.++.++.+++|+||..+|+.+++++|
T Consensus 146 ~~i~TGD~~~~a~~~~-~~lgi---~~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 146 VAILTGDNESTASAIA-KQLGI---FDSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEEESSEHHHHHHHH-HHTTS---CSEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred eeeeeccccccccccc-ccccc---cccccccccc--ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 4789999888888655 78899 4444443332 799999999999999999999999999999999999986
No 88
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.01 E-value=1.8e-05 Score=67.07 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=57.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC-C---CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSD-E---VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~-~---~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG 76 (274)
++|+||+....+...+ +++|+..+|+..+... + .+..++.|.....++++++..+.++++|||+.+|+.+++++|
T Consensus 86 ~~IvS~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~ 164 (205)
T PRK13582 86 VVILSDTFYEFAGPLM-RQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEAD 164 (205)
T ss_pred EEEEeCCcHHHHHHHH-HHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCC
Confidence 4799999999998766 8889998887544332 1 112223344445566666667789999999999999999999
Q ss_pred CEEE
Q 023972 77 MEVV 80 (274)
Q Consensus 77 i~vi 80 (274)
+.+.
T Consensus 165 ~~v~ 168 (205)
T PRK13582 165 AGIL 168 (205)
T ss_pred CCEE
Confidence 8653
No 89
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.99 E-value=1.5e-05 Score=77.11 Aligned_cols=73 Identities=22% Similarity=0.304 Sum_probs=58.5
Q ss_pred CEEEcCCCh------------HHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC----CCCCcEEEEec
Q 023972 1 MALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN----MEPSSSLVIED 64 (274)
Q Consensus 1 laIvSn~~~------------~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~----v~p~~~vvvgD 64 (274)
++|+||... ..+...+ +++|+. |+.+++.++...+||.|.++..++++++ +++++++||||
T Consensus 216 IvIvTNQ~gI~~G~~~~~~~~~ki~~iL-~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGD 292 (526)
T TIGR01663 216 ICIFTNQGGIARGKINADDFKAKIEAIV-AKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGD 292 (526)
T ss_pred EEEEECCcccccCcccHHHHHHHHHHHH-HHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCC
Confidence 579999776 3355444 778884 9999988888899999999999999885 88999999999
Q ss_pred CHhhHHHHHHcC
Q 023972 65 SVIGVVAGKAAG 76 (274)
Q Consensus 65 ~~~di~aA~~aG 76 (274)
...++++|+.+|
T Consensus 293 aagr~~~g~~ag 304 (526)
T TIGR01663 293 AAGRPANGKAAG 304 (526)
T ss_pred cccchHHHHhcC
Confidence 987766655444
No 90
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.99 E-value=1.9e-05 Score=65.55 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=56.9
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCC--------------------CCCCCCCHHHHHHHHHHhCCCCCcEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRTGKPSPDIFLEAAKRLNMEPSSSL 60 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~--------------------~~~~KP~pe~f~~~l~~l~v~p~~~v 60 (274)
++|+||+....+...+ +++|+.++|+.+++++. ...+.+.++.+..+..+. +.+++
T Consensus 91 ~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~---~~~~i 166 (188)
T TIGR01489 91 FIVISDGNDFFIDPVL-EGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPK---YQHII 166 (188)
T ss_pred EEEEeCCcHHHHHHHH-HHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCHHHHHHHHHhhc---CceEE
Confidence 4799999999888766 88899999999997543 112223466776665543 68999
Q ss_pred EEecCHhhHHHHHHcCCE
Q 023972 61 VIEDSVIGVVAGKAAGME 78 (274)
Q Consensus 61 vvgD~~~di~aA~~aGi~ 78 (274)
++||+..|+.+|+++++-
T Consensus 167 ~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 167 YIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred EECCCcchhchHhcCCcc
Confidence 999999999999998653
No 91
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=97.98 E-value=4e-05 Score=64.06 Aligned_cols=61 Identities=28% Similarity=0.367 Sum_probs=54.2
Q ss_pred CCcEEEecC-----CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCC
Q 023972 25 SFSVIVGSD-----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 85 (274)
Q Consensus 25 ~Fd~v~~~~-----~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~ 85 (274)
.||.++.+- .+..+||.|.++..+++++++++.+.+||||...|+++|.++|+..+.+..+
T Consensus 86 ~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~ 151 (181)
T COG0241 86 KIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTG 151 (181)
T ss_pred ccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence 688888773 3678999999999999999999999999999999999999999997666554
No 92
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.91 E-value=4.2e-05 Score=69.97 Aligned_cols=80 Identities=14% Similarity=0.179 Sum_probs=63.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCc-------EEEecC---CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFS-------VIVGSD---EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 70 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd-------~v~~~~---~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~ 70 (274)
++|+|++....++. +.+++|+...+. ..+++. +...+||+++.+.++++++|+++++|+++||+.+|+.
T Consensus 200 ~aIvSgg~~~~~~~-l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~ 278 (322)
T PRK11133 200 VAIASGGFTYFADY-LRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLP 278 (322)
T ss_pred EEEEECCcchhHHH-HHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHH
Confidence 47999999887775 447888865442 112221 2335789999999999999999999999999999999
Q ss_pred HHHHcCCEEEE
Q 023972 71 AGKAAGMEVVA 81 (274)
Q Consensus 71 aA~~aGi~vi~ 81 (274)
+++.+|+.+..
T Consensus 279 m~~~AGlgiA~ 289 (322)
T PRK11133 279 MIKAAGLGIAY 289 (322)
T ss_pred HHHHCCCeEEe
Confidence 99999998876
No 93
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.91 E-value=2.6e-05 Score=67.00 Aligned_cols=76 Identities=16% Similarity=0.098 Sum_probs=58.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCC---cEEEecCCCCCCCCCHHHH----------HHHHHHhCCCCCcEEEEecCHh
Q 023972 1 MALASNSHRATIESKISYQHGWNESF---SVIVGSDEVRTGKPSPDIF----------LEAAKRLNMEPSSSLVIEDSVI 67 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~F---d~v~~~~~~~~~KP~pe~f----------~~~l~~l~v~p~~~vvvgD~~~ 67 (274)
++|+|++....+...+ ++++...++ +.++..+.....||+|+.+ ..++++++..+.++++|||+..
T Consensus 89 ~~IvS~~~~~~i~~il-~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~ 167 (214)
T TIGR03333 89 FYVISGGMDFFVYPLL-EGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVT 167 (214)
T ss_pred EEEECCCcHHHHHHHH-HhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHH
Confidence 4899999999888766 665544444 3455555566778888776 3677777778899999999999
Q ss_pred hHHHHHHcCC
Q 023972 68 GVVAGKAAGM 77 (274)
Q Consensus 68 di~aA~~aGi 77 (274)
|+.+|+.+|+
T Consensus 168 D~~~a~~Ad~ 177 (214)
T TIGR03333 168 DVEAAKQSDL 177 (214)
T ss_pred HHHHHHhCCe
Confidence 9999999997
No 94
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.87 E-value=1.3e-05 Score=69.95 Aligned_cols=49 Identities=29% Similarity=0.554 Sum_probs=45.0
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCcE-EEEecCH-hhHHHHHHcCCEEEEecC
Q 023972 36 RTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSV-IGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 36 ~~~KP~pe~f~~~l~~l~v~p~~~-vvvgD~~-~di~aA~~aGi~vi~V~~ 84 (274)
...||+|++|..+++++++++.++ +||||+. .|+++|+++|+++++|.+
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~ 235 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLT 235 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEec
Confidence 467999999999999999988887 9999998 699999999999999865
No 95
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=97.86 E-value=5.2e-05 Score=69.68 Aligned_cols=84 Identities=17% Similarity=0.237 Sum_probs=64.1
Q ss_pred CEEEcCCChHHHHHHHHHHc-C-------CCCCCcEEEecCCC-----------------CCCCCCH-------HH----
Q 023972 1 MALASNSHRATIESKISYQH-G-------WNESFSVIVGSDEV-----------------RTGKPSP-------DI---- 44 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~-g-------l~~~Fd~v~~~~~~-----------------~~~KP~p-------e~---- 44 (274)
++|+||++..++...+ +.+ | +.++||.|+++..- +..++.. ..
T Consensus 203 lfLvTNS~~~yt~~im-~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~~~~~~~l~~g~vY~gG 281 (343)
T TIGR02244 203 LFLLTNSDYDYTDKGM-KYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLKWGEVDGLEPGKVYSGG 281 (343)
T ss_pred EEEEeCCCHHHHHHHH-HHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCcccCCccccccCCCeEeCC
Confidence 5899999999999777 664 7 89999999987531 1112221 11
Q ss_pred -HHHHHHHhCCCCCcEEEEecCHh-hHHHHH-HcCCEEEEecCC
Q 023972 45 -FLEAAKRLNMEPSSSLVIEDSVI-GVVAGK-AAGMEVVAVPSL 85 (274)
Q Consensus 45 -f~~~l~~l~v~p~~~vvvgD~~~-di~aA~-~aGi~vi~V~~~ 85 (274)
.....+.+++.+.++++|||+.+ |+..|+ .+|+.+++|.+.
T Consensus 282 n~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 282 SLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred CHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 22356778899999999999998 999988 899999998774
No 96
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=97.71 E-value=1.4e-05 Score=65.98 Aligned_cols=79 Identities=6% Similarity=0.026 Sum_probs=67.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCC-CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~-~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v 79 (274)
++|.|++++.++...+ ++++... +|+.+++.+++...++. +.+.+..++.+++++|+|+|+..++.++.++|+.+
T Consensus 60 i~I~Ts~~~~yA~~il-~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 60 LVIFTASLEEYADPVL-DILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred EEEEcCCcHHHHHHHH-HHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 5799999999999766 8888775 89999999887766665 77888889999999999999999999999998876
Q ss_pred EEec
Q 023972 80 VAVP 83 (274)
Q Consensus 80 i~V~ 83 (274)
....
T Consensus 136 ~~f~ 139 (162)
T TIGR02251 136 KSWF 139 (162)
T ss_pred CCCC
Confidence 5554
No 97
>PTZ00445 p36-lilke protein; Provisional
Probab=97.65 E-value=0.00019 Score=61.18 Aligned_cols=73 Identities=14% Similarity=0.216 Sum_probs=57.4
Q ss_pred HHHHHHHHHcCCCCCCcEEEecC-----------CCCCCCCCHHH--H--HHHHHHhCCCCCcEEEEecCHhhHHHHHHc
Q 023972 11 TIESKISYQHGWNESFSVIVGSD-----------EVRTGKPSPDI--F--LEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 75 (274)
Q Consensus 11 ~~~~~l~~~~gl~~~Fd~v~~~~-----------~~~~~KP~pe~--f--~~~l~~l~v~p~~~vvvgD~~~di~aA~~a 75 (274)
++...| +.-+..-..+.|++.. ..+..||+|+. | .+++++.|+.|+++++++|....+++|++.
T Consensus 119 li~~~l-k~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~l 197 (219)
T PTZ00445 119 MVEAAL-KKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKE 197 (219)
T ss_pred HHHHHH-HhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHC
Confidence 344444 5444444445565542 23788999999 9 889999999999999999999999999999
Q ss_pred CCEEEEecC
Q 023972 76 GMEVVAVPS 84 (274)
Q Consensus 76 Gi~vi~V~~ 84 (274)
|+.++.+..
T Consensus 198 Gi~ai~f~~ 206 (219)
T PTZ00445 198 GYIALHVTG 206 (219)
T ss_pred CCEEEEcCC
Confidence 999999975
No 98
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.60 E-value=0.0002 Score=60.42 Aligned_cols=82 Identities=16% Similarity=0.161 Sum_probs=62.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcE-EEecCC----------CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSV-IVGSDE----------VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 69 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~-v~~~~~----------~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di 69 (274)
++|+|++....+...+ +++|+..+|.. +...++ ...+++.+..+.+.+++.++++++++++||+..|+
T Consensus 106 v~ivS~s~~~~v~~~~-~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~ 184 (202)
T TIGR01490 106 IVLVSASLTILVKPLA-RILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDL 184 (202)
T ss_pred EEEEeCCcHHHHHHHH-HHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccH
Confidence 4799999999888655 88899887754 332111 12334556667778888899999999999999999
Q ss_pred HHHHHcCCEEEEec
Q 023972 70 VAGKAAGMEVVAVP 83 (274)
Q Consensus 70 ~aA~~aGi~vi~V~ 83 (274)
.+++.+|..++..+
T Consensus 185 ~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 185 PLLSLVGHPYVVNP 198 (202)
T ss_pred HHHHhCCCcEEeCC
Confidence 99999998876554
No 99
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.60 E-value=0.00015 Score=66.36 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=52.6
Q ss_pred CCCCCCHHHHHHHHHHh--------CC-----CCCcEEEEecCH-hhHHHHHHcCCEEEEecCCCCcccc---cccccEE
Q 023972 36 RTGKPSPDIFLEAAKRL--------NM-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR---YTAADEV 98 (274)
Q Consensus 36 ~~~KP~pe~f~~~l~~l--------~v-----~p~~~vvvgD~~-~di~aA~~aGi~vi~V~~~~~~~~~---iSss~~i 98 (274)
..+||+|.+|..+++.+ ++ ++++++||||+. .|+..|+++|+.+++|.++...... ...++.+
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v 309 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI 309 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence 35899999999988777 43 347999999998 5999999999999999886322211 1235678
Q ss_pred Eecccc
Q 023972 99 INSLLD 104 (274)
Q Consensus 99 i~~l~e 104 (274)
++++.+
T Consensus 310 v~~l~e 315 (321)
T TIGR01456 310 VNDVFD 315 (321)
T ss_pred ECCHHH
Confidence 887765
No 100
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.50 E-value=0.0002 Score=63.72 Aligned_cols=70 Identities=29% Similarity=0.469 Sum_probs=56.3
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCCccccc----ccccEEEeccccc
Q 023972 36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL 105 (274)
Q Consensus 36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~~~~~i----Sss~~ii~~l~e~ 105 (274)
-.+||+|.+|..+++.++..+++++||||+.. |+.+|.++|+.++.|.++-...+.+ --++++++++.+.
T Consensus 187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~ 261 (269)
T COG0647 187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL 261 (269)
T ss_pred ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence 56899999999999999999999999999987 9999999999999999875433221 2234566666553
No 101
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.50 E-value=0.00056 Score=58.49 Aligned_cols=79 Identities=13% Similarity=0.044 Sum_probs=61.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcE--EE------ecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSV--IV------GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 72 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~--v~------~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA 72 (274)
++|+|++....+...+ +++|+..+|.. .+ ++... ..++.+...++.+++.+. +++++||+.+|+.++
T Consensus 86 ~~IVS~~~~~~~~~il-~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml 160 (203)
T TIGR02137 86 VVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTML 160 (203)
T ss_pred EEEEeCChHHHHHHHH-HHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHH
Confidence 4899999999888655 88999888862 22 22221 457778888887777664 899999999999999
Q ss_pred HHcCCEEEEecC
Q 023972 73 KAAGMEVVAVPS 84 (274)
Q Consensus 73 ~~aGi~vi~V~~ 84 (274)
+.+|+.+.....
T Consensus 161 ~~Ag~~ia~~ak 172 (203)
T TIGR02137 161 SEAHAGILFHAP 172 (203)
T ss_pred HhCCCCEEecCC
Confidence 999999877755
No 102
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.46 E-value=0.0004 Score=62.03 Aligned_cols=74 Identities=19% Similarity=0.222 Sum_probs=60.0
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEE------EecCCCCCCCCCH---------HHHHHHHHHhC--CCCCcEEEEe
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVI------VGSDEVRTGKPSP---------DIFLEAAKRLN--MEPSSSLVIE 63 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v------~~~~~~~~~KP~p---------e~f~~~l~~l~--v~p~~~vvvg 63 (274)
++|+|++....+...| +++|+.+.+..| +..+.+..++|.| ..+..+.+.++ ..+.+||++|
T Consensus 140 v~IvS~G~~~~Ie~vL-~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vG 218 (277)
T TIGR01544 140 VFIFSAGIGNVLEEVL-RQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLG 218 (277)
T ss_pred EEEEeCCcHHHHHHHH-HHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEEC
Confidence 4799999999999877 778998777777 5555666678888 66666777777 7889999999
Q ss_pred cCHhhHHHHHHc
Q 023972 64 DSVIGVVAGKAA 75 (274)
Q Consensus 64 D~~~di~aA~~a 75 (274)
|+..|+.+|...
T Consensus 219 Ds~~Dl~ma~g~ 230 (277)
T TIGR01544 219 DSQGDLRMADGV 230 (277)
T ss_pred cChhhhhHhcCC
Confidence 999999997654
No 103
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=97.46 E-value=3.2e-05 Score=69.86 Aligned_cols=75 Identities=19% Similarity=0.141 Sum_probs=59.0
Q ss_pred CCCCCHHHHHHHH-HHhCCCCCcEEEEecCHhhH---------HHHHHcCCEEEEecCCCCcccccccccEEEecccccc
Q 023972 37 TGKPSPDIFLEAA-KRLNMEPSSSLVIEDSVIGV---------VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 106 (274)
Q Consensus 37 ~~KP~pe~f~~~l-~~l~v~p~~~vvvgD~~~di---------~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e~~ 106 (274)
.++.+|+.|++.+ +++++ +.++++.|++||. +.+++.|+.++.+++...++..+||+ .||+.+.+++
T Consensus 205 ~a~lsa~~Fi~iL~~~l~~--~~ivvG~Df~FG~~r~G~~~l~~~~~~~gf~v~~v~~~~~~g~~ISST-~IR~~l~~G~ 281 (297)
T cd02169 205 QTALDARIFRKYIAPALNI--TKRYVGEEPFSRVTAIYNQTMQEELLSPAIEVIEIERKKYDGQPISAS-TVRQLLKEGN 281 (297)
T ss_pred HhcCCHHHHHHHHHHHcCC--cEEEEcCCCCCCCcchhHHHHHHhcccCCCEEEEecccccCCcEEcHH-HHHHHHHcCC
Confidence 5688999999733 44555 7888889999983 33677799999999988888888886 7777888898
Q ss_pred ccccCCCCCCCcccCCCC
Q 023972 107 PEKWGLPPFQDWIEGTLP 124 (274)
Q Consensus 107 ~~~~~l~~~~~~~a~~lL 124 (274)
+.. |++||
T Consensus 282 v~~----------A~~lL 289 (297)
T cd02169 282 LEE----------IAKLV 289 (297)
T ss_pred HHH----------HHHhC
Confidence 876 77766
No 104
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=97.44 E-value=0.00016 Score=61.20 Aligned_cols=53 Identities=30% Similarity=0.431 Sum_probs=48.3
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCC
Q 023972 35 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPK 87 (274)
Q Consensus 35 ~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~ 87 (274)
.-.+||+|..|..+++.+|++|+++|||||... |+-.|...||+-+.|.++..
T Consensus 177 ~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~ 230 (262)
T KOG3040|consen 177 TVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKF 230 (262)
T ss_pred EEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecccc
Confidence 346899999999999999999999999988887 89999999999999998743
No 105
>PRK08238 hypothetical protein; Validated
Probab=97.27 E-value=0.0016 Score=62.66 Aligned_cols=77 Identities=16% Similarity=0.101 Sum_probs=60.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+|++++..++..+ +++|+ ||.++++++....||++..- .+.+.++. +.++++||+..|+.+++.+| +.+
T Consensus 91 v~LaTas~~~~a~~i~-~~lGl---Fd~Vigsd~~~~~kg~~K~~-~l~~~l~~--~~~~yvGDS~~Dlp~~~~A~-~av 162 (479)
T PRK08238 91 LVLATASDERLAQAVA-AHLGL---FDGVFASDGTTNLKGAAKAA-ALVEAFGE--RGFDYAGNSAADLPVWAAAR-RAI 162 (479)
T ss_pred EEEEeCCCHHHHHHHH-HHcCC---CCEEEeCCCccccCCchHHH-HHHHHhCc--cCeeEecCCHHHHHHHHhCC-CeE
Confidence 4799999999988655 88887 99999999887787776532 34455543 56899999999999999999 666
Q ss_pred EecCC
Q 023972 81 AVPSL 85 (274)
Q Consensus 81 ~V~~~ 85 (274)
.|++.
T Consensus 163 ~Vn~~ 167 (479)
T PRK08238 163 VVGAS 167 (479)
T ss_pred EECCC
Confidence 77653
No 106
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.24 E-value=0.001 Score=54.70 Aligned_cols=74 Identities=16% Similarity=0.161 Sum_probs=53.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCC------------CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDE------------VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 68 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~------------~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d 68 (274)
++|+|++.+..+...+ +++|+..+|...+..++ .......+..+.+.++++++++++++++||+..|
T Consensus 92 ~~ivS~~~~~~i~~~~-~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D 170 (177)
T TIGR01488 92 TVIVSGGFDFFVEPVA-EKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKITLKKIIAVGDSVND 170 (177)
T ss_pred EEEECCCcHHHHHHHH-HHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHH
Confidence 4799999999888766 88899877764443321 1112223456666777888889999999999999
Q ss_pred HHHHHHc
Q 023972 69 VVAGKAA 75 (274)
Q Consensus 69 i~aA~~a 75 (274)
+.+++.+
T Consensus 171 ~~~~~~a 177 (177)
T TIGR01488 171 LPMLKLA 177 (177)
T ss_pred HHHHhcC
Confidence 9988653
No 107
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=97.10 E-value=0.00087 Score=59.84 Aligned_cols=54 Identities=26% Similarity=0.414 Sum_probs=48.9
Q ss_pred CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCC
Q 023972 34 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPK 87 (274)
Q Consensus 34 ~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~ 87 (274)
..-.+||++.++..++++.+++|++++||||... |+..|++.|+++.++-++-.
T Consensus 219 P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~ 273 (306)
T KOG2882|consen 219 PIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVT 273 (306)
T ss_pred CeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcC
Confidence 3456899999999999999999999999999998 99999999999999987643
No 108
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=96.94 E-value=0.0044 Score=51.34 Aligned_cols=74 Identities=28% Similarity=0.349 Sum_probs=50.6
Q ss_pred CEEEcCCC-------hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhC-----CCCCcEEEEecCHh-
Q 023972 1 MALASNSH-------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-----MEPSSSLVIEDSVI- 67 (274)
Q Consensus 1 laIvSn~~-------~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~-----v~p~~~vvvgD~~~- 67 (274)
+.|+||+. ...+. .+.+.+|+. .+.. ...|| ..+.++++.++ .+|++++||||-.+
T Consensus 80 v~IvSNsaGs~~d~~~~~a~-~~~~~lgIp----vl~h----~~kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~T 148 (168)
T PF09419_consen 80 VLIVSNSAGSSDDPDGERAE-ALEKALGIP----VLRH----RAKKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFT 148 (168)
T ss_pred EEEEECCCCcccCccHHHHH-HHHHhhCCc----EEEe----CCCCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHH
Confidence 46899983 44444 455666752 2221 24677 44444444443 35999999999998
Q ss_pred hHHHHHHcCCEEEEecCC
Q 023972 68 GVVAGKAAGMEVVAVPSL 85 (274)
Q Consensus 68 di~aA~~aGi~vi~V~~~ 85 (274)
|+-+|+..|+.++++..+
T Consensus 149 DVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 149 DVLMGNRMGSYTILVTDG 166 (168)
T ss_pred HHHHhhccCceEEEEecC
Confidence 999999999999998754
No 109
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.89 E-value=0.001 Score=58.12 Aligned_cols=71 Identities=18% Similarity=0.237 Sum_probs=54.6
Q ss_pred CEEEcCCChHHHH--HHHHHHcCCCC-CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972 1 MALASNSHRATIE--SKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77 (274)
Q Consensus 1 laIvSn~~~~~~~--~~l~~~~gl~~-~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi 77 (274)
++++||+++.... ..| +++|+.. +|+.|+++++... +.+..+++++++.+.+++++||...|++.....+.
T Consensus 43 ~~ivTN~~~~~~~~~~~L-~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 43 VYFVSNSPRNIFSLHKTL-KSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEEEeCCCCChHHHHHHH-HHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 4799999887655 455 8899997 9999999886432 45555667788888999999999888876655443
No 110
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain. Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.
Probab=96.79 E-value=0.00052 Score=57.69 Aligned_cols=71 Identities=18% Similarity=0.131 Sum_probs=51.1
Q ss_pred CCCCCCHHHHHHHH-HHhCCCCCcEEEEecCHhhH---------HHHHHcCCEEEEecCCCCcccccccccEEEeccccc
Q 023972 36 RTGKPSPDIFLEAA-KRLNMEPSSSLVIEDSVIGV---------VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 105 (274)
Q Consensus 36 ~~~KP~pe~f~~~l-~~l~v~p~~~vvvgD~~~di---------~aA~~aGi~vi~V~~~~~~~~~iSss~~ii~~l~e~ 105 (274)
..++.+|+.|++.+ +++++ +.++++.|++||. +.-.+.|+++..++....++..+||+ .||+.+.++
T Consensus 89 ~~a~lsa~~Fi~~L~~~l~~--~~ivvG~df~FG~~~~G~~~~L~~~~~~g~~v~~I~r~~~~g~~iSST-~IR~~L~~G 165 (182)
T smart00764 89 SQTTLDLRIFRKYIAPALGI--THRYVGEEPFSPVTAIYNQTMKQTLLSPAIEVVEIERKKANGQPISAS-TVRKLLKEG 165 (182)
T ss_pred HHhcCCHHHHHHHHHHHcCc--eEEEEcCCCCCCCCCccCHHHHHHHhhCCCEEEEEecccCCCcEECHH-HHHHHHHcC
Confidence 35688999999743 44655 7888889999982 22246699999998876666666775 777777777
Q ss_pred cccc
Q 023972 106 RPEK 109 (274)
Q Consensus 106 ~~~~ 109 (274)
++..
T Consensus 166 ~v~~ 169 (182)
T smart00764 166 NLEE 169 (182)
T ss_pred CHHH
Confidence 7654
No 111
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=96.74 E-value=0.004 Score=61.19 Aligned_cols=66 Identities=20% Similarity=0.234 Sum_probs=49.0
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 78 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~ 78 (274)
++|+||.++..+...+ +++|+.++|..+ .|+.=.+.+++++..+.+++|+||..+|+.+++++|+.
T Consensus 404 v~ivTgd~~~~a~~i~-~~lgi~~~f~~~-----------~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vg 469 (556)
T TIGR01525 404 LVMLTGDNRSAAEAVA-AELGIDEVHAEL-----------LPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVG 469 (556)
T ss_pred EEEEeCCCHHHHHHHH-HHhCCCeeeccC-----------CHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEe
Confidence 4799999999888655 889998777643 11222234445544667999999999999999999943
No 112
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=96.40 E-value=0.024 Score=47.08 Aligned_cols=80 Identities=15% Similarity=0.158 Sum_probs=55.4
Q ss_pred CEEEcCCChHHHHHHHHHHcCCC----------CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972 1 MALASNSHRATIESKISYQHGWN----------ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 70 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~----------~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~ 70 (274)
+|++|-++.......+++.+++. ++|+..-.... ..-..|..+.++.|++.++++++.|-...++
T Consensus 64 lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g-----sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 64 LAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPG-----SKTTHFRRIHRKTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS------HHHHHHHHHHHH---GGGEEEEES-HHHHH
T ss_pred EEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecC-----chHHHHHHHHHhcCCChhHEEEecCchhcce
Confidence 58899655444444555999999 88988555442 3457888889999999999999999999999
Q ss_pred HHHHcCCEEEEecCC
Q 023972 71 AGKAAGMEVVAVPSL 85 (274)
Q Consensus 71 aA~~aGi~vi~V~~~ 85 (274)
...+.|+.++.++.+
T Consensus 139 ~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 139 VVSKLGVTCVLVPDG 153 (169)
T ss_dssp HHHTTT-EEEE-SSS
T ss_pred eeEecCcEEEEeCCC
Confidence 998999999999885
No 113
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.39 E-value=0.0074 Score=59.07 Aligned_cols=65 Identities=22% Similarity=0.255 Sum_probs=49.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi 77 (274)
++|+||.++..+...+ +++|+.++|..+. | +.=...+++++.+.++++|+||..+|+.+++++|+
T Consensus 382 v~vvTgd~~~~a~~i~-~~lgi~~~f~~~~---------p--~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 382 VVMLTGDRRAVAERVA-RELGIDEVHAELL---------P--EDKLEIVKELREKYGPVAMVGDGINDAPALAAADV 446 (536)
T ss_pred EEEEcCCCHHHHHHHH-HHcCChhhhhccC---------c--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCE
Confidence 4799999999888766 8899988775332 2 12234555555566899999999999999999996
No 114
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=96.21 E-value=0.0015 Score=53.63 Aligned_cols=72 Identities=26% Similarity=0.337 Sum_probs=46.4
Q ss_pred HHcCCCCCCcEEEecC-CCCCCCCCHHHHHHH-HH-HhCCCCCcEEEEecCHhhH----------HHHHHcCCEEEEecC
Q 023972 18 YQHGWNESFSVIVGSD-EVRTGKPSPDIFLEA-AK-RLNMEPSSSLVIEDSVIGV----------VAGKAAGMEVVAVPS 84 (274)
Q Consensus 18 ~~~gl~~~Fd~v~~~~-~~~~~KP~pe~f~~~-l~-~l~v~p~~~vvvgD~~~di----------~aA~~aGi~vi~V~~ 84 (274)
+.+|+ |.++.-+ +...++.+|+.|++. +. ++++ ..++++.|++||. +.+++.|+.+..++.
T Consensus 72 ~~~Gv----d~~~~~~F~~~~~~ls~~~Fi~~iL~~~l~~--~~ivvG~DfrFG~~~~G~~~~L~~~~~~~g~~v~~v~~ 145 (157)
T PF06574_consen 72 ESLGV----DYVIVIPFTEEFANLSPEDFIEKILKEKLNV--KHIVVGEDFRFGKNRSGDVELLKELGKEYGFEVEVVPP 145 (157)
T ss_dssp HHTTE----SEEEEE-CCCHHCCS-HHHHHHHHCCCHCTE--EEEEEETT-EESGGGEEEHHHHHHCTTTT-SEEEEE--
T ss_pred HHcCC----CEEEEecchHHHHcCCHHHHHHHHHHhcCCc--cEEEEccCccCCCCCCCCHHHHHHhcccCceEEEEECC
Confidence 66665 5544432 334678999999985 44 5665 6788889999983 346778899999999
Q ss_pred CCCcccccccc
Q 023972 85 LPKQTHRYTAA 95 (274)
Q Consensus 85 ~~~~~~~iSss 95 (274)
...++..+||+
T Consensus 146 ~~~~~~~ISSt 156 (157)
T PF06574_consen 146 VKIDGEKISST 156 (157)
T ss_dssp -EETTEE-SHH
T ss_pred EEcCCcEeCCC
Confidence 87788888885
No 115
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=95.75 E-value=0.046 Score=46.71 Aligned_cols=69 Identities=17% Similarity=0.130 Sum_probs=47.5
Q ss_pred CChHHHHHHHHHHcCCC----CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972 7 SHRATIESKISYQHGWN----ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 81 (274)
Q Consensus 7 ~~~~~~~~~l~~~~gl~----~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~ 81 (274)
.....+...+ +..++. .+|..+..... .|+. ....+++.+|+++++++++||+.+|+.+.+.+|..+.+
T Consensus 148 ~~~~~~~~~l-~~~~~~~~~~~~~~ei~~~~~---~Kg~--al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 148 SRMPRFTALL-ADLGLAIVQGNRFSHVLGASS---SKGK--AANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred hHHHHHHHHH-HHcCCeEEecCCeeEEecCCC---CHHH--HHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 3344444444 445664 44444444332 3544 45678899999999999999999999999999987653
No 116
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.69 E-value=0.023 Score=50.08 Aligned_cols=39 Identities=13% Similarity=0.103 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972 41 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 41 ~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v 79 (274)
.+..+..+++++++++++++++||+.+|+.+++.+|+.+
T Consensus 200 K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~v 238 (272)
T PRK10530 200 KGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGV 238 (272)
T ss_pred hHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceE
Confidence 456788899999999999999999999999999999754
No 117
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=95.57 E-value=0.018 Score=51.78 Aligned_cols=44 Identities=11% Similarity=0.144 Sum_probs=39.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 45 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f 45 (274)
++|+||+.+..+...| +++|+..+|+.++++++....||+|+..
T Consensus 165 LaIaTS~~Re~v~~~L-~~lGLd~YFdvIIs~Gdv~~~kp~~e~~ 208 (301)
T TIGR01684 165 LVLWSYGDRDHVVESM-RKVKLDRYFDIIISGGHKAEEYSTMSTE 208 (301)
T ss_pred EEEEECCCHHHHHHHH-HHcCCCcccCEEEECCccccCCCCcccc
Confidence 5899999999998766 8899999999999999999999998665
No 118
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=95.17 E-value=0.051 Score=46.34 Aligned_cols=79 Identities=15% Similarity=0.118 Sum_probs=50.6
Q ss_pred EEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972 3 LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82 (274)
Q Consensus 3 IvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V 82 (274)
++++.....+...+ +..++..++.. ...+-....-........+++.+++++++++++||+.+|+.+.+.+|+.+..-
T Consensus 112 ~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~ 189 (215)
T TIGR01487 112 MREGKDVDEVREII-KERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVA 189 (215)
T ss_pred ecCCccHHHHHHHH-HhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcC
Confidence 34555556666555 55555432110 00011112223345777788899999999999999999999999999886554
Q ss_pred c
Q 023972 83 P 83 (274)
Q Consensus 83 ~ 83 (274)
+
T Consensus 190 n 190 (215)
T TIGR01487 190 N 190 (215)
T ss_pred C
Confidence 4
No 119
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=95.09 E-value=0.05 Score=46.41 Aligned_cols=48 Identities=19% Similarity=0.214 Sum_probs=39.7
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972 36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 83 (274)
Q Consensus 36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~ 83 (274)
......+..+..+++++++++++++++||+.+|+.+.+.+|+.+..-+
T Consensus 145 ~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N 192 (225)
T TIGR01482 145 PQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVAN 192 (225)
T ss_pred eCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCC
Confidence 344556677778889999999999999999999999999998765443
No 120
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.04 E-value=0.054 Score=44.43 Aligned_cols=61 Identities=18% Similarity=0.206 Sum_probs=41.8
Q ss_pred HHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCC----CCCcEEEEecC-----------HhhHHHHHHcCCEEE
Q 023972 18 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM----EPSSSLVIEDS-----------VIGVVAGKAAGMEVV 80 (274)
Q Consensus 18 ~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v----~p~~~vvvgD~-----------~~di~aA~~aGi~vi 80 (274)
+.+++. +...++...-..+||.+.++..+++.++. +.++++||||. -.|.+.|.+.|++..
T Consensus 78 ~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 78 KELGIP--IQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp HHCTS---EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHcCCc--eEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 455553 33333334447999999999999888764 78999999996 468999999999863
No 121
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=94.91 E-value=0.078 Score=45.42 Aligned_cols=46 Identities=20% Similarity=0.205 Sum_probs=38.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972 37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82 (274)
Q Consensus 37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V 82 (274)
.....+..+..+++.+++++++++++||+.+|+.+.+.+|+.+..-
T Consensus 154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~ 199 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVA 199 (230)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEec
Confidence 3444567888889999999999999999999999999999886543
No 122
>PRK10671 copA copper exporting ATPase; Provisional
Probab=94.62 E-value=0.077 Score=54.76 Aligned_cols=67 Identities=19% Similarity=0.230 Sum_probs=51.4
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v 79 (274)
++++|+..+..+.... +++|+.++|..+ .|+.=.+++++++.++.+++|+||..+|+.+++.+|+.+
T Consensus 669 v~~~Tgd~~~~a~~ia-~~lgi~~~~~~~-----------~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgi 735 (834)
T PRK10671 669 LVMLTGDNPTTANAIA-KEAGIDEVIAGV-----------LPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGI 735 (834)
T ss_pred EEEEcCCCHHHHHHHH-HHcCCCEEEeCC-----------CHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeE
Confidence 4689999998887655 888997544321 244445677777777889999999999999999999844
No 123
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=94.43 E-value=0.12 Score=51.01 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=46.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 78 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~ 78 (274)
++|+|+..+..+.... +++|+. +| ++- +| +.-.+.++++..++++++|+||..+|..+++++|+.
T Consensus 424 v~ilSgd~~~~a~~ia-~~lgi~-~~-----~~~----~p--~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vg 488 (562)
T TIGR01511 424 PVMLTGDNRKTAKAVA-KELGIN-VR-----AEV----LP--DDKAALIKELQEKGRVVAMVGDGINDAPALAQADVG 488 (562)
T ss_pred EEEEcCCCHHHHHHHH-HHcCCc-EE-----ccC----Ch--HHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEE
Confidence 4789999999888655 888994 22 111 22 222344455555678999999999999999999974
No 124
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=94.39 E-value=0.16 Score=43.66 Aligned_cols=83 Identities=18% Similarity=0.240 Sum_probs=61.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCC----------CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 70 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~----------~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~ 70 (274)
++|+|.+....+.. +.+.+|+...+......++ ...++-..+...+.++++|+++++++.+||+.+|+-
T Consensus 96 v~iiSgg~~~lv~~-ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlp 174 (212)
T COG0560 96 VVIISGGFTFLVEP-IAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLP 174 (212)
T ss_pred EEEEcCChHHHHHH-HHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHH
Confidence 47899999987774 6689999887765544443 111222345555688889999999999999999999
Q ss_pred HHHHcCCEEEEecC
Q 023972 71 AGKAAGMEVVAVPS 84 (274)
Q Consensus 71 aA~~aGi~vi~V~~ 84 (274)
+-+.+|..+..-+.
T Consensus 175 ml~~ag~~ia~n~~ 188 (212)
T COG0560 175 MLEAAGLPIAVNPK 188 (212)
T ss_pred HHHhCCCCeEeCcC
Confidence 99999988765544
No 125
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=94.24 E-value=0.28 Score=41.08 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=56.8
Q ss_pred EEEcCCChHHHHHHHHHH---cCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCE
Q 023972 2 ALASNSHRATIESKISYQ---HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 78 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~---~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~ 78 (274)
.|-|+.+-....-.+ .+ .+|..+|+-.+-.. .-.|-....|.+.+...|++|.++++..|...-+.+|+.+|+.
T Consensus 123 yiYSSGSV~AQkL~F-ghs~agdL~~lfsGyfDtt--iG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~ 199 (229)
T COG4229 123 YIYSSGSVKAQKLFF-GHSDAGDLNSLFSGYFDTT--IGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLA 199 (229)
T ss_pred EEEcCCCchhHHHhh-cccccccHHhhhcceeecc--ccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchh
Confidence 345555555443222 22 23444554433332 2356677899999999999999999999999999999999999
Q ss_pred EEEecCC
Q 023972 79 VVAVPSL 85 (274)
Q Consensus 79 vi~V~~~ 85 (274)
++.+...
T Consensus 200 t~l~~R~ 206 (229)
T COG4229 200 TGLAVRP 206 (229)
T ss_pred eeeeecC
Confidence 9888653
No 126
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.13 E-value=0.12 Score=45.78 Aligned_cols=43 Identities=14% Similarity=0.034 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhCCCC-CcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972 42 PDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 42 pe~f~~~l~~l~v~p-~~~vvvgD~~~di~aA~~aGi~vi~V~~ 84 (274)
.....++++.+++++ ++++++||+.+|+.+++.+|+.++.-+.
T Consensus 192 g~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA 235 (273)
T PRK00192 192 GKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGP 235 (273)
T ss_pred HHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence 345666888999999 9999999999999999999988766554
No 127
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=93.84 E-value=0.32 Score=42.52 Aligned_cols=50 Identities=24% Similarity=0.240 Sum_probs=41.7
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972 35 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 35 ~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~ 84 (274)
.....+.+.....+++.+++++++++++||+.+|+.+.+.++...+++..
T Consensus 162 ~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 162 LPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred EeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 44666777888888899999999999999999999999987666666654
No 128
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=93.75 E-value=0.078 Score=43.22 Aligned_cols=74 Identities=16% Similarity=0.318 Sum_probs=59.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
+||+|......++... +.+|+...|.- ..+ .-..|.++++++++.++++.++||...|+-.-++.|+.+.
T Consensus 54 vAIITGr~s~ive~Ra-~~LGI~~~~qG---~~d------K~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 54 VAIITGRDSPIVEKRA-KDLGIKHLYQG---ISD------KLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred EEEEeCCCCHHHHHHH-HHcCCceeeec---hHh------HHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence 4899999999898877 78898654432 122 2368888999999999999999999999999999999876
Q ss_pred EecC
Q 023972 81 AVPS 84 (274)
Q Consensus 81 ~V~~ 84 (274)
.-+.
T Consensus 124 ~~dA 127 (170)
T COG1778 124 VADA 127 (170)
T ss_pred cccc
Confidence 6544
No 129
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=93.71 E-value=0.11 Score=42.36 Aligned_cols=64 Identities=16% Similarity=0.085 Sum_probs=46.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCC-CCC-cEEEecCCCCCCCCCHHHHHHHH-HHhCCCCCcEEEEecCHhhHHH
Q 023972 1 MALASNSHRATIESKISYQHGWN-ESF-SVIVGSDEVRTGKPSPDIFLEAA-KRLNMEPSSSLVIEDSVIGVVA 71 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~-~~F-d~v~~~~~~~~~KP~pe~f~~~l-~~l~v~p~~~vvvgD~~~di~a 71 (274)
++|+|++.+.++...+ +.++.. .+| +.+++.+++. . .+.+-+ ..++.+.+.+|+++|+..-...
T Consensus 76 l~I~T~~~~~yA~~vl-~~ldp~~~~F~~ri~~rd~~~--~----~~~KdL~~i~~~d~~~vvivDd~~~~~~~ 142 (156)
T TIGR02250 76 MHVYTMGTRAYAQAIA-KLIDPDGKYFGDRIISRDESG--S----PHTKSLLRLFPADESMVVIIDDREDVWPW 142 (156)
T ss_pred EEEEeCCcHHHHHHHH-HHhCcCCCeeccEEEEeccCC--C----CccccHHHHcCCCcccEEEEeCCHHHhhc
Confidence 5899999999999766 888888 589 7788877643 1 223334 3346677899999999864443
No 130
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=93.03 E-value=0.28 Score=51.08 Aligned_cols=77 Identities=18% Similarity=0.165 Sum_probs=58.9
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCC----------------CCCCCHHHHHHHHHHhCCCCCcEEEEec
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIFLEAAKRLNMEPSSSLVIED 64 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~----------------~~KP~pe~f~~~l~~l~v~p~~~vvvgD 64 (274)
+.++|+.....+.... +.+|+...++.++++.+.. .+.++|+.-...++.++-....+.|+||
T Consensus 547 v~miTGD~~~tA~~ia-~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGD 625 (884)
T TIGR01522 547 IIMITGDSQETAVSIA-RRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGD 625 (884)
T ss_pred EEEECCCCHHHHHHHH-HHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECC
Confidence 3689999999888644 8899988887776665442 2346777777766666555578999999
Q ss_pred CHhhHHHHHHcCCE
Q 023972 65 SVIGVVAGKAAGME 78 (274)
Q Consensus 65 ~~~di~aA~~aGi~ 78 (274)
..+|..+.+++++-
T Consensus 626 GvND~pAl~~AdVG 639 (884)
T TIGR01522 626 GVNDAPALKLADIG 639 (884)
T ss_pred CcccHHHHHhCCee
Confidence 99999999999954
No 131
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=92.84 E-value=0.17 Score=43.76 Aligned_cols=55 Identities=18% Similarity=0.065 Sum_probs=43.5
Q ss_pred cEEEec----CCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972 27 SVIVGS----DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 81 (274)
Q Consensus 27 d~v~~~----~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~ 81 (274)
..+.++ +-.....+.+.....+++++++++++++++||+.+|+.+.+.+|..+..
T Consensus 142 ~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 142 KVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 444554 3345566777888889999999999999999999999999998876643
No 132
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=92.55 E-value=0.37 Score=46.14 Aligned_cols=85 Identities=20% Similarity=0.252 Sum_probs=51.2
Q ss_pred CEEEcCCChHHHHHHHHHHcC--------CCCCCcEEEecCC-----------------CCCCCCC-------------H
Q 023972 1 MALASNSHRATIESKISYQHG--------WNESFSVIVGSDE-----------------VRTGKPS-------------P 42 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~g--------l~~~Fd~v~~~~~-----------------~~~~KP~-------------p 42 (274)
+.++||++-.++...+.-.+| +.++||.|++... .+..+.. .
T Consensus 202 lFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l~~~~~~~~l~~g~vY~g 281 (448)
T PF05761_consen 202 LFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKLKWGKYVGPLEKGKVYSG 281 (448)
T ss_dssp EEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSEECS---SS--TC-EEEE
T ss_pred EEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCccccccccccccCCCEeec
Confidence 358999999999987754443 5689999998632 1111111 1
Q ss_pred HHHHHHHHHhCCCCCcEEEEecCHh-hHHHHH-HcCCEEEEecCC
Q 023972 43 DIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGK-AAGMEVVAVPSL 85 (274)
Q Consensus 43 e~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~-~aGi~vi~V~~~ 85 (274)
.....+.+.++....+++++||+.+ |+..++ ..|+++++|-+.
T Consensus 282 Gn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 282 GNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp --HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 1122344556777789999999999 776655 559999888653
No 133
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.21 E-value=0.24 Score=41.63 Aligned_cols=45 Identities=22% Similarity=0.145 Sum_probs=39.0
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
+...+.+..+..+++++++++.+++++||+.+|+.+++.+|+.+.
T Consensus 159 p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 159 PAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 456667788888899999999999999999999999999998764
No 134
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=90.59 E-value=0.41 Score=41.78 Aligned_cols=59 Identities=15% Similarity=0.030 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc-------CCEEEEecCCCCcccccccccEEEecccc
Q 023972 42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-------GMEVVAVPSLPKQTHRYTAADEVINSLLD 104 (274)
Q Consensus 42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a-------Gi~vi~V~~~~~~~~~iSss~~ii~~l~e 104 (274)
...+..++++++.++..++++||..+|..+.+.+ |...+.+..+ ...+.++.++.+..+
T Consensus 169 g~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~~~~~~~~~ 234 (244)
T TIGR00685 169 GEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAKFHLTGPQQ 234 (244)
T ss_pred HHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCceEeCCCHHH
Confidence 3777788999999889999999999999988877 6666666432 122334466665544
No 135
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=90.33 E-value=1.3 Score=35.13 Aligned_cols=93 Identities=11% Similarity=0.207 Sum_probs=59.3
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 81 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~ 81 (274)
.|+|......+.. +.+-.|+. -+.++... +++.=.++++.++-+-..++||||-.+|+-+-+++.+-++.
T Consensus 49 ~IASgDr~gsl~~-lae~~gi~--~~rv~a~a-------~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~t 118 (152)
T COG4087 49 YIASGDRKGSLVQ-LAEFVGIP--VERVFAGA-------DPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICT 118 (152)
T ss_pred EEecCCcchHHHH-HHHHcCCc--eeeeeccc-------CHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEE
Confidence 3555555555543 33555542 23333322 34555556777765558999999999999999999888777
Q ss_pred ecCCCCcccccccccEEEecccc
Q 023972 82 VPSLPKQTHRYTAADEVINSLLD 104 (274)
Q Consensus 82 V~~~~~~~~~iSss~~ii~~l~e 104 (274)
+..........-++|.+++++.+
T Consensus 119 iq~e~v~~r~l~~ADvvik~i~e 141 (152)
T COG4087 119 IQQEGVPERLLLTADVVLKEIAE 141 (152)
T ss_pred eccCCcchHHHhhchhhhhhHHH
Confidence 76543333335566677777765
No 136
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=89.99 E-value=0.77 Score=41.48 Aligned_cols=35 Identities=14% Similarity=0.230 Sum_probs=30.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 36 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~ 36 (274)
++|+||+++..+...| +.+|+..+|+.++++++..
T Consensus 167 LaIvTNg~Re~v~~~L-e~lgL~~yFDvII~~g~i~ 201 (303)
T PHA03398 167 LVLWSYGNREHVVHSL-KETKLEGYFDIIICGGRKA 201 (303)
T ss_pred EEEEcCCChHHHHHHH-HHcCCCccccEEEECCCcc
Confidence 5899999999998766 8899999999999988743
No 137
>PLN02645 phosphoglycolate phosphatase
Probab=88.06 E-value=2.4 Score=38.50 Aligned_cols=71 Identities=17% Similarity=0.125 Sum_probs=48.7
Q ss_pred CEEEcCCC---hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972 1 MALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77 (274)
Q Consensus 1 laIvSn~~---~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi 77 (274)
+.++||.+ +......| +.+|+...++.|+++.. .....++..+....+.+++.+.....+.++++|+
T Consensus 63 ~~~~TN~~~~~~~~~~~~l-~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi 132 (311)
T PLN02645 63 LVFVTNNSTKSRAQYGKKF-ESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKDKKVYVIGEEGILEELELAGF 132 (311)
T ss_pred EEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEeehHH---------HHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCC
Confidence 36899987 44444455 67899888888888754 3333444455443456777777788899999999
Q ss_pred EEEE
Q 023972 78 EVVA 81 (274)
Q Consensus 78 ~vi~ 81 (274)
.++.
T Consensus 133 ~~~~ 136 (311)
T PLN02645 133 QYLG 136 (311)
T ss_pred EEec
Confidence 8765
No 138
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=87.53 E-value=2.2 Score=38.01 Aligned_cols=63 Identities=10% Similarity=0.170 Sum_probs=41.2
Q ss_pred CEEEcCCChH---HHHHHHHHHcCCCCC-CcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHH
Q 023972 1 MALASNSHRA---TIESKISYQHGWNES-FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 71 (274)
Q Consensus 1 laIvSn~~~~---~~~~~l~~~~gl~~~-Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~a 71 (274)
++++||.+.. .+...| +.+|+..+ ++.++..++ . ++.+.-+..+.+.+++ +++|||...|+..
T Consensus 137 v~iVTnR~~~~~~~T~~~L-kk~Gi~~~~~d~lllr~~-~--~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~ 203 (266)
T TIGR01533 137 IFYVSNRSEKEKAATLKNL-KRFGFPQADEEHLLLKKD-K--SSKESRRQKVQKDYEI----VLLFGDNLLDFDD 203 (266)
T ss_pred EEEEeCCCcchHHHHHHHH-HHcCcCCCCcceEEeCCC-C--CCcHHHHHHHHhcCCE----EEEECCCHHHhhh
Confidence 4789998743 334555 77899764 467777654 2 3445666555565544 7888999988743
No 139
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=87.38 E-value=3.8 Score=36.05 Aligned_cols=78 Identities=17% Similarity=0.084 Sum_probs=58.4
Q ss_pred EEcCCChHHHHHHHHHHcCCCCCCc--EEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 3 LASNSHRATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 3 IvSn~~~~~~~~~l~~~~gl~~~Fd--~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
+||+.+--....+. =.++|..+|. .|+++-.++ | ..+|.++.+++|-+....++|||-..--++|+..+++++
T Consensus 180 LVTs~qLVPaLaKc-LLy~L~~~f~ieNIYSa~kvG--K--~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw 254 (274)
T TIGR01658 180 LVTSGQLIPSLAKC-LLFRLDTIFRIENVYSSIKVG--K--LQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV 254 (274)
T ss_pred EEEcCccHHHHHHH-HHhccCCccccccccchhhcc--h--HHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence 56666544433333 2458888874 577776643 4 479999999999866888999999999999999999999
Q ss_pred EecCC
Q 023972 81 AVPSL 85 (274)
Q Consensus 81 ~V~~~ 85 (274)
-|...
T Consensus 255 ~I~~h 259 (274)
T TIGR01658 255 KIDLH 259 (274)
T ss_pred EeecC
Confidence 88663
No 140
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=86.52 E-value=1.3 Score=38.71 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972 40 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82 (274)
Q Consensus 40 P~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V 82 (274)
-.......+++.+++++++++++||+.+|+.+.+.+|+.+..-
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~ 230 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG 230 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec
Confidence 3456666788899999999999999999999999999876553
No 141
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=86.29 E-value=0.91 Score=39.22 Aligned_cols=45 Identities=13% Similarity=-0.018 Sum_probs=34.9
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
+.+|+.+..++.....+++++.+++++||+.+|+.+.+.+|+.++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 567776666655444445577799999999999999999998765
No 142
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=84.98 E-value=1.5 Score=38.39 Aligned_cols=44 Identities=18% Similarity=0.163 Sum_probs=36.9
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972 40 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 83 (274)
Q Consensus 40 P~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~ 83 (274)
........+++.+|+++++++++||+.+|+.+-+.+|..+..-+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N 239 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGN 239 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecC
Confidence 34466777889999999999999999999999999998765543
No 143
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=84.97 E-value=3.7 Score=42.01 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=44.7
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v 79 (274)
+.++|+..+..+.... +++|+..+++ . .|+.=...+++++ .+..++|+||..+|..+.+.+++.+
T Consensus 587 ~~llTGd~~~~a~~ia-~~lgi~~~~~------~------~p~~K~~~v~~l~-~~~~v~mvGDgiNDapAl~~A~vgi 651 (741)
T PRK11033 587 GVMLTGDNPRAAAAIA-GELGIDFRAG------L------LPEDKVKAVTELN-QHAPLAMVGDGINDAPAMKAASIGI 651 (741)
T ss_pred EEEEcCCCHHHHHHHH-HHcCCCeecC------C------CHHHHHHHHHHHh-cCCCEEEEECCHHhHHHHHhCCeeE
Confidence 3689999999887644 8899963322 1 2232223444454 3368999999999999999998544
No 144
>PRK10976 putative hydrolase; Provisional
Probab=84.45 E-value=1.2 Score=39.09 Aligned_cols=42 Identities=14% Similarity=0.105 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972 42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 83 (274)
Q Consensus 42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~ 83 (274)
......+++.+|+++++++++||+.+|+.+-+.+|..+..-+
T Consensus 192 g~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~N 233 (266)
T PRK10976 192 GHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGN 233 (266)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecC
Confidence 566777889999999999999999999999999998765543
No 145
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=84.31 E-value=2.3 Score=36.03 Aligned_cols=41 Identities=17% Similarity=0.123 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972 42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 82 (274)
Q Consensus 42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V 82 (274)
......+++.+++++++++++||+.+|+.+-+.+|..++.-
T Consensus 188 ~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~ 228 (254)
T PF08282_consen 188 GSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG 228 (254)
T ss_dssp HHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET
T ss_pred HHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc
Confidence 34556678999999999999999999999999999875443
No 146
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=82.09 E-value=6.2 Score=34.47 Aligned_cols=75 Identities=15% Similarity=0.137 Sum_probs=49.1
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC----CCCC----------CCC------CHHHHHHHHHH---hCCCCC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSD----EVRT----------GKP------SPDIFLEAAKR---LNMEPS 57 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~----~~~~----------~KP------~pe~f~~~l~~---l~v~p~ 57 (274)
+.|+|++..-.++..| ++.|+...|+.|++-. +-+. .+. ......+.+.. -|+.-.
T Consensus 92 ~~IiSDaNs~fI~~iL-~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~ 170 (234)
T PF06888_consen 92 LIIISDANSFFIETIL-EHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYD 170 (234)
T ss_pred EEEEeCCcHhHHHHHH-HhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcc
Confidence 4799999999999877 8889999998888752 1000 011 12233333332 255668
Q ss_pred cEEEEecCHhhHHHHHHcC
Q 023972 58 SSLVIEDSVIGVVAGKAAG 76 (274)
Q Consensus 58 ~~vvvgD~~~di~aA~~aG 76 (274)
++++|||..+|+=.+...+
T Consensus 171 rviYiGDG~nD~Cp~~~L~ 189 (234)
T PF06888_consen 171 RVIYIGDGRNDFCPALRLR 189 (234)
T ss_pred eEEEECCCCCCcCcccccC
Confidence 8999999988875555543
No 147
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=79.93 E-value=4.7 Score=32.97 Aligned_cols=69 Identities=17% Similarity=0.324 Sum_probs=41.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCC----------C---CCHHHHHHH---HHHhCCCCCcEEEEec
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------K---PSPDIFLEA---AKRLNMEPSSSLVIED 64 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~----------K---P~pe~f~~~---l~~l~v~p~~~vvvgD 64 (274)
+.|+|.+....+...+ +.+|+...+ +++.+-.... . -....+.++ ... +.....++++||
T Consensus 108 v~IvS~~~~~~i~~~~-~~~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~-~~~~~~~~~iGD 183 (192)
T PF12710_consen 108 VVIVSGSPDEIIEPIA-ERLGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE-DIDPDRVIAIGD 183 (192)
T ss_dssp EEEEEEEEHHHHHHHH-HHTTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH-THTCCEEEEEES
T ss_pred EEEECCCcHHHHHHHH-HHcCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc-CCCCCeEEEEEC
Confidence 3689999998888655 788886532 2222110000 0 022333333 222 667789999999
Q ss_pred CHhhHHHHH
Q 023972 65 SVIGVVAGK 73 (274)
Q Consensus 65 ~~~di~aA~ 73 (274)
+..|+.+++
T Consensus 184 s~~D~~~lr 192 (192)
T PF12710_consen 184 SINDLPMLR 192 (192)
T ss_dssp SGGGHHHHH
T ss_pred CHHHHHHhC
Confidence 999998764
No 148
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=79.58 E-value=3.9 Score=35.68 Aligned_cols=45 Identities=11% Similarity=-0.040 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHhCCC--CCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972 40 PSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 40 P~pe~f~~~l~~l~v~--p~~~vvvgD~~~di~aA~~aGi~vi~V~~ 84 (274)
........+++.++++ .++++++||+.+|+.+.+.+|..+..-+.
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 3344566678888988 89999999999999999999988765543
No 149
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=79.00 E-value=2.7 Score=37.04 Aligned_cols=43 Identities=7% Similarity=0.052 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972 41 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 83 (274)
Q Consensus 41 ~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~ 83 (274)
.......+++.+|+++++++++||+.+|+.+-+.+|..+..-+
T Consensus 189 Kg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N 231 (272)
T PRK15126 189 KGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGN 231 (272)
T ss_pred hHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccC
Confidence 3456666889999999999999999999999999997654443
No 150
>COG4996 Predicted phosphatase [General function prediction only]
Probab=77.51 E-value=4.4 Score=32.26 Aligned_cols=60 Identities=22% Similarity=0.234 Sum_probs=39.0
Q ss_pred EcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHH---HHHH------hCCCCCcEEEEecCHhhHHH
Q 023972 4 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE---AAKR------LNMEPSSSLVIEDSVIGVVA 71 (274)
Q Consensus 4 vSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~---~l~~------l~v~p~~~vvvgD~~~di~a 71 (274)
+|=+....+...| +.+++..||+.++. +|+|.-|.. ++.. ..++|+++++++|..--+.-
T Consensus 63 ~sWN~~~kA~~aL-ral~~~~yFhy~Vi-------ePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~ 131 (164)
T COG4996 63 ASWNFEDKAIKAL-RALDLLQYFHYIVI-------EPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGN 131 (164)
T ss_pred eecCchHHHHHHH-HHhchhhhEEEEEe-------cCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHH
Confidence 3333334444467 78899999999875 566655543 3322 34689999999998654433
No 151
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=75.60 E-value=5.2 Score=35.28 Aligned_cols=42 Identities=10% Similarity=-0.073 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHhCC---CCCcEEEEecCHhhHHHHHHcCCEEEEe
Q 023972 41 SPDIFLEAAKRLNM---EPSSSLVIEDSVIGVVAGKAAGMEVVAV 82 (274)
Q Consensus 41 ~pe~f~~~l~~l~v---~p~~~vvvgD~~~di~aA~~aGi~vi~V 82 (274)
.......+++.+|+ ++++++.+||+.+|+.+-+.+|+.+..-
T Consensus 188 Kg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 188 KDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 34556668888999 9999999999999999999999876554
No 152
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=72.54 E-value=5 Score=35.06 Aligned_cols=45 Identities=18% Similarity=0.142 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972 40 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 40 P~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~ 84 (274)
-.......+++.+++++++++++||+.+|+.+-+.+|..+..-+.
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na 233 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA 233 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC
Confidence 344566667788999999999999999999999999987755443
No 153
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=72.48 E-value=3.8 Score=33.48 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=30.5
Q ss_pred CCCCcEEEEecCHh-hHHHHHHcCCEEEEecCCCC
Q 023972 54 MEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPK 87 (274)
Q Consensus 54 v~p~~~vvvgD~~~-di~aA~~aGi~vi~V~~~~~ 87 (274)
.++++++||||..| |+-.|+..|.-.+++.++-.
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 57899999999999 99999999999999987643
No 154
>PLN02887 hydrolase family protein
Probab=71.75 E-value=5.9 Score=39.32 Aligned_cols=43 Identities=14% Similarity=0.096 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEec
Q 023972 41 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 83 (274)
Q Consensus 41 ~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~ 83 (274)
.......+++.+|+++++++++||+.+|+.+-+.+|..+..-+
T Consensus 508 KG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgN 550 (580)
T PLN02887 508 KGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSN 550 (580)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCC
Confidence 3456667889999999999999999999999999998765443
No 155
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=70.15 E-value=6.4 Score=37.71 Aligned_cols=66 Identities=21% Similarity=0.187 Sum_probs=53.5
Q ss_pred HHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHh-hHHHHHHcCCEEEE
Q 023972 16 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVA 81 (274)
Q Consensus 16 l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~-di~aA~~aGi~vi~ 81 (274)
++...|..-+--.++.+.+....|-+...|-..++.-+++|.+.+.+||+.. |...+++.|+.+..
T Consensus 134 ~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf 200 (635)
T COG5610 134 FLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLF 200 (635)
T ss_pred HHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHH
Confidence 3345565444345888888899999999999999989999999999999987 88888998887643
No 156
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=68.74 E-value=8.5 Score=36.20 Aligned_cols=83 Identities=19% Similarity=0.265 Sum_probs=54.4
Q ss_pred EEEcCCChHHHHHHHHHHc--CCCCCCcEEEecCC---------------CC---------------CCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQH--GWNESFSVIVGSDE---------------VR---------------TGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~--gl~~~Fd~v~~~~~---------------~~---------------~~KP~pe~f~~~l 49 (274)
-++||+.-.+....+..++ ++..|||.++.... .. .+.+++..-..+.
T Consensus 218 fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySggs~~~~~ 297 (424)
T KOG2469|consen 218 FLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSGGSLKTVE 297 (424)
T ss_pred EEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcccCCcchHHHHH
Confidence 3788888887776665554 47789998777631 11 1233344444555
Q ss_pred HHhCCCCCcEEEEecCHhh-H-HHHHHcCCEEEEecC
Q 023972 50 KRLNMEPSSSLVIEDSVIG-V-VAGKAAGMEVVAVPS 84 (274)
Q Consensus 50 ~~l~v~p~~~vvvgD~~~d-i-~aA~~aGi~vi~V~~ 84 (274)
..+++.-.+++++||+.+| + ..-+..|+.++.|.+
T Consensus 298 ~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 298 TSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred HHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 6666666799999999994 3 344666887777655
No 157
>PRK11590 hypothetical protein; Provisional
Probab=67.24 E-value=28 Score=29.38 Aligned_cols=79 Identities=9% Similarity=-0.058 Sum_probs=48.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC-CC---CC---CCCCHHHHHHHHH-HhCCCCCcEEEEecCHhhHHHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSD-EV---RT---GKPSPDIFLEAAK-RLNMEPSSSLVIEDSVIGVVAG 72 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~-~~---~~---~KP~pe~f~~~l~-~l~v~p~~~vvvgD~~~di~aA 72 (274)
++|+||+++..+...+ +++|+.. .+.++|.+ +. ++ .....+.=...++ .++.+...+...||+..|+..-
T Consensus 115 l~IvSas~~~~~~~il-~~l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL 192 (211)
T PRK11590 115 VWLITGSPQPLVEQVY-FDTPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLL 192 (211)
T ss_pred EEEEeCCcHHHHHHHH-HHccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHH
Confidence 5899999999888655 7777632 44555553 11 00 1111122223333 3455566777889999999998
Q ss_pred HHcCCEEEE
Q 023972 73 KAAGMEVVA 81 (274)
Q Consensus 73 ~~aGi~vi~ 81 (274)
.-++-.+.+
T Consensus 193 ~~a~~~~~v 201 (211)
T PRK11590 193 YFCQHRWRV 201 (211)
T ss_pred HhCCCCEEE
Confidence 888866543
No 158
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=64.64 E-value=15 Score=32.19 Aligned_cols=43 Identities=21% Similarity=0.117 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCC
Q 023972 42 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 85 (274)
Q Consensus 42 pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~ 85 (274)
......++++++++++++++.||+.+|+.+- ..+...+.|...
T Consensus 167 ~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 167 GAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp HHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred HHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 3455557788999999999999999999888 666777777653
No 159
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=64.08 E-value=22 Score=28.39 Aligned_cols=57 Identities=18% Similarity=0.209 Sum_probs=37.8
Q ss_pred CCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh----HHHHHHcCCEEEEecCCCCcccccccc
Q 023972 25 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG----VVAGKAAGMEVVAVPSLPKQTHRYTAA 95 (274)
Q Consensus 25 ~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d----i~aA~~aGi~vi~V~~~~~~~~~iSss 95 (274)
+.|.++.. ...+|+.|++ ++ +++.++++.|+.++ .+..++.|..++.++.. ..+||+
T Consensus 76 ~VD~vi~f-----~~~~~~~fi~---~l--~~~~vv~G~d~~~~~~~~~~~~~~~g~~v~~~~~~----~~iSSs 136 (144)
T TIGR02199 76 SVDYVVIF-----DEDTPEELIG---EL--KPDILVKGGDYKVETLVGAELVESYGGQVVLLPFV----EGRSTT 136 (144)
T ss_pred CCCEEEEC-----CCCCHHHHHH---Hh--CCCEEEECCCCCCCcchhHHHHHHcCCEEEEEeCC----CCcCHH
Confidence 45766662 3567899985 44 44677777888773 24567889999888753 246664
No 160
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=60.05 E-value=5.3 Score=32.06 Aligned_cols=65 Identities=12% Similarity=0.144 Sum_probs=42.8
Q ss_pred CEEEcCCChHHHHHHHHHHcCC-CCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhH
Q 023972 1 MALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 69 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl-~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di 69 (274)
++|.|.+.+.++...+ +.+.. ..+|+.+++.+++...+- .+.+-+..++.++.++|+|.|+..-.
T Consensus 54 v~i~T~~~~~ya~~v~-~~ldp~~~~~~~~~~r~~~~~~~~---~~~KdL~~l~~~~~~vvivDD~~~~~ 119 (159)
T PF03031_consen 54 VVIWTSASEEYAEPVL-DALDPNGKLFSRRLYRDDCTFDKG---SYIKDLSKLGRDLDNVVIVDDSPRKW 119 (159)
T ss_dssp EEEE-SS-HHHHHHHH-HHHTTTTSSEEEEEEGGGSEEETT---EEE--GGGSSS-GGGEEEEES-GGGG
T ss_pred EEEEEeehhhhhhHHH-Hhhhhhcccccccccccccccccc---ccccchHHHhhccccEEEEeCCHHHe
Confidence 4789999999998766 77766 568999998876532221 11256777777789999999998744
No 161
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=58.92 E-value=7.3 Score=33.81 Aligned_cols=68 Identities=15% Similarity=0.201 Sum_probs=44.9
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCC----C-----------CCCCCH---------HHHHHHHHHhCCCC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEV----R-----------TGKPSP---------DIFLEAAKRLNMEP 56 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~----~-----------~~KP~p---------e~f~~~l~~l~v~p 56 (274)
+.|+|.+..-.++..| +++|+.+.|..|++-... + -.+-.| +.|..-..+-|+.-
T Consensus 104 liIVSDaNsfFIe~~L-ea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~y 182 (256)
T KOG3120|consen 104 LIIVSDANSFFIEEIL-EAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRY 182 (256)
T ss_pred EEEEecCchhHHHHHH-HHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCce
Confidence 3689999999999877 889999999877764210 0 001111 22222223446666
Q ss_pred CcEEEEecCHhhH
Q 023972 57 SSSLVIEDSVIGV 69 (274)
Q Consensus 57 ~~~vvvgD~~~di 69 (274)
++++++||..+|+
T Consensus 183 er~iYvGDG~nD~ 195 (256)
T KOG3120|consen 183 ERLIYVGDGANDF 195 (256)
T ss_pred eeEEEEcCCCCCc
Confidence 7999999998884
No 162
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=58.73 E-value=20 Score=31.23 Aligned_cols=56 Identities=18% Similarity=0.271 Sum_probs=46.2
Q ss_pred CCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972 23 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 23 ~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~ 84 (274)
..|||--++ .|-....|....+.++.++.++++.-|...-..+|+.+|+.+..+..
T Consensus 170 ~gyfDt~iG------~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~r 225 (254)
T KOG2630|consen 170 SGYFDTTIG------LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSR 225 (254)
T ss_pred hhhhhcccc------ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeec
Confidence 456665443 46677899999999999999999999999999999999998876644
No 163
>TIGR01518 g3p_cytidyltrns glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most but not all species encoding proteins in this family are Gram-positive bacteria.
Probab=58.29 E-value=10 Score=29.30 Aligned_cols=49 Identities=14% Similarity=0.019 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEecCHhhHHHH-HHcCCEEEEecCCCCcccccccc
Q 023972 41 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG-KAAGMEVVAVPSLPKQTHRYTAA 95 (274)
Q Consensus 41 ~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA-~~aGi~vi~V~~~~~~~~~iSss 95 (274)
+++.|.+.++.+++ +-++++.|+..+...- +..|+.++.++. ...+||+
T Consensus 70 ~~~~f~~~l~~~~~--~~vv~G~D~~g~~~~l~~~~~~~v~~v~~----~~~vSST 119 (125)
T TIGR01518 70 SWEQKKQDIIDFNI--DVFVMGDDWEGKFDFLKDECPLKVVYLPR----TEGVSTT 119 (125)
T ss_pred CccchHHHHHHcCC--CEEEECCCccchHHHHhhccCcEEEEeCC----CCCccHH
Confidence 45666666666655 5555556664443322 345888888764 3456774
No 164
>PLN02382 probable sucrose-phosphatase
Probab=57.27 E-value=23 Score=33.64 Aligned_cols=43 Identities=21% Similarity=0.110 Sum_probs=33.3
Q ss_pred HHHHHHHHHHh---CCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972 42 PDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 42 pe~f~~~l~~l---~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~ 84 (274)
......+++++ ++++++++++||+.+|+.+-+.+|...+.+..
T Consensus 177 g~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 177 GQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred HHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 34555577777 89999999999999999999999853444433
No 165
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=55.69 E-value=36 Score=29.94 Aligned_cols=46 Identities=15% Similarity=0.286 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEecCHhhHH----HHHHcCCEEEEecCC
Q 023972 40 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV----AGKAAGMEVVAVPSL 85 (274)
Q Consensus 40 P~pe~f~~~l~~l~v~p~~~vvvgD~~~di~----aA~~aGi~vi~V~~~ 85 (274)
...+.+...+.+++..|+++|+|.|....+. ++++.|+.+.++...
T Consensus 162 ~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 162 DKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred ccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 4458888899999999999999999988643 467789998888653
No 166
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=55.41 E-value=13 Score=33.41 Aligned_cols=48 Identities=25% Similarity=0.324 Sum_probs=35.7
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHH------HHcCCEEEEec
Q 023972 36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG------KAAGMEVVAVP 83 (274)
Q Consensus 36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA------~~aGi~vi~V~ 83 (274)
...-|+|+.|.+++.++|++.+..||+.|...+..++ +-+|.+=|.|-
T Consensus 69 ~~~lp~~e~fa~~~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iL 122 (285)
T COG2897 69 PHMLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRIL 122 (285)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEe
Confidence 4667899999999999999999999997765554444 34465444443
No 167
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=55.27 E-value=32 Score=36.21 Aligned_cols=77 Identities=18% Similarity=0.114 Sum_probs=47.8
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCC----CcEEEecCC----------------CCCCCCCHHHHHHHHHHhCCCCCcEEE
Q 023972 2 ALASNSHRATIESKISYQHGWNES----FSVIVGSDE----------------VRTGKPSPDIFLEAAKRLNMEPSSSLV 61 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~----Fd~v~~~~~----------------~~~~KP~pe~f~~~l~~l~v~p~~~vv 61 (274)
.++|+.....+.. +.+.+|+... .+.++++.+ .-.+...|+.=.+.++.++-....+.|
T Consensus 557 ~miTGD~~~tA~~-ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~ 635 (917)
T TIGR01116 557 IMITGDNKETAEA-ICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAM 635 (917)
T ss_pred EEecCCCHHHHHH-HHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEE
Confidence 5788888777764 4478888531 112222211 112233444444555555545567888
Q ss_pred EecCHhhHHHHHHcCCEE
Q 023972 62 IEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 62 vgD~~~di~aA~~aGi~v 79 (274)
+||..+|..+.+++++-+
T Consensus 636 iGDG~ND~~alk~AdVGi 653 (917)
T TIGR01116 636 TGDGVNDAPALKKADIGI 653 (917)
T ss_pred ecCCcchHHHHHhCCeeE
Confidence 999999999999999854
No 168
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=53.31 E-value=57 Score=30.66 Aligned_cols=77 Identities=23% Similarity=0.245 Sum_probs=54.2
Q ss_pred EEcCCChHHHHHHHHHHcCCCCCC--cEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEE
Q 023972 3 LASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 3 IvSn~~~~~~~~~l~~~~gl~~~F--d~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi 80 (274)
++|+..-.....++ -..||...| +.|+.+...+ | -.+|.++..++|- ....|+|||-.---++|++.+|.+.
T Consensus 375 lvTttqLipalaKv-LL~gLg~~fpiENIYSa~kiG--K--escFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pfw 448 (468)
T KOG3107|consen 375 LVTTTQLIPALAKV-LLYGLGSSFPIENIYSATKIG--K--ESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFW 448 (468)
T ss_pred EEeccchhHHHHHH-HHHhcCCcccchhhhhhhhcc--H--HHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceE
Confidence 56666554444444 234777666 4577766544 2 3689999999997 3566777999988999999999998
Q ss_pred EecCC
Q 023972 81 AVPSL 85 (274)
Q Consensus 81 ~V~~~ 85 (274)
-+...
T Consensus 449 rI~~h 453 (468)
T KOG3107|consen 449 RISSH 453 (468)
T ss_pred eeccC
Confidence 88653
No 169
>PF08057 Ery_res_leader2: Erythromycin resistance leader peptide; InterPro: IPR012559 This family consists of erythromycin resistance gene leader peptides. These leader peptides are involved in the transcriptional attenuation control of the synthesis of the macrolide-lincosamide -streptogramin B resistance protein. It acts as a transcriptional attenuator, in contrast to other inducible erm genes. The mRNA leader sequence can fold in either of two mutually exclusive conformations, one of which is postulated to form in the absence of induction, and to contain two rho factor-independent terminators [].; GO: 0046677 response to antibiotic
Probab=49.67 E-value=5.9 Score=18.29 Aligned_cols=8 Identities=50% Similarity=0.613 Sum_probs=6.4
Q ss_pred ccCcccee
Q 023972 144 VLGIPTAN 151 (274)
Q Consensus 144 ~lg~pTaN 151 (274)
.|-|||.|
T Consensus 6 rlrfptln 13 (14)
T PF08057_consen 6 RLRFPTLN 13 (14)
T ss_pred eeeccccC
Confidence 37799988
No 170
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=48.29 E-value=14 Score=32.68 Aligned_cols=41 Identities=10% Similarity=0.071 Sum_probs=29.4
Q ss_pred HHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHc---CCEEEEec
Q 023972 43 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA---GMEVVAVP 83 (274)
Q Consensus 43 e~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~a---Gi~vi~V~ 83 (274)
....++++.+++..++++++||..+|..+-+.+ +...+.|.
T Consensus 177 ~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg 220 (266)
T PRK10187 177 EAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVG 220 (266)
T ss_pred HHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEEC
Confidence 444457888998889999999999997765544 33445553
No 171
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=48.29 E-value=69 Score=28.29 Aligned_cols=70 Identities=19% Similarity=0.163 Sum_probs=41.9
Q ss_pred CEEEcCCC---hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972 1 MALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77 (274)
Q Consensus 1 laIvSn~~---~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi 77 (274)
+.++||++ +......| +.+|+....+.++++.. .....+++......+++++|+.. -.+..+++|+
T Consensus 37 ~~~~Tnns~~~~~~~~~~l-~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~ 105 (279)
T TIGR01452 37 ALFVTNNSTKSRAEYALKF-ARLGFNGLAEQLFSSAL---------CAARLLRQPPDAPKAVYVIGEEG-LRAELDAAGI 105 (279)
T ss_pred EEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEecHHH---------HHHHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCC
Confidence 36899854 33433456 67888655566666543 44445555433446788888753 2445577888
Q ss_pred EEEE
Q 023972 78 EVVA 81 (274)
Q Consensus 78 ~vi~ 81 (274)
.++.
T Consensus 106 ~~~~ 109 (279)
T TIGR01452 106 RLAG 109 (279)
T ss_pred EEec
Confidence 8653
No 172
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=48.13 E-value=33 Score=27.12 Aligned_cols=45 Identities=22% Similarity=0.251 Sum_probs=31.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCCcEEEEecCH--hhHHH------HHHcCCEEEE
Q 023972 37 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV--IGVVA------GKAAGMEVVA 81 (274)
Q Consensus 37 ~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~--~di~a------A~~aGi~vi~ 81 (274)
...|+++.|.+.+..+|+++...|++.|.. .+..+ .+.+|.+-+.
T Consensus 75 ~~~p~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ 127 (138)
T cd01445 75 SMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVA 127 (138)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeE
Confidence 456778899999999999998888887642 24433 3456665433
No 173
>cd02170 cytidylyltransferase cytidylyltransferase. The cytidylyltransferase family includes cholinephosphate cytidylyltransferase (CCT), glycerol-3-phosphate cytidylyltransferase, RafE and phosphoethanolamine cytidylyltransferase (ECT). All enzymes catalyze the transfer of a cytidylyl group from CTP to various substrates.
Probab=47.73 E-value=14 Score=28.92 Aligned_cols=64 Identities=16% Similarity=0.239 Sum_probs=34.9
Q ss_pred CCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhh------HHHHHHcCCEEEEecCCCCcccccccccE
Q 023972 24 ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG------VVAGKAAGMEVVAVPSLPKQTHRYTAADE 97 (274)
Q Consensus 24 ~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~d------i~aA~~aGi~vi~V~~~~~~~~~iSss~~ 97 (274)
.++|.++.. +|+.|.+.+.++ .|+.++++.|+.+| .+.-++.|..++..+ ..+..+||+ .
T Consensus 63 ~~vd~v~~~--------~~~~~~~~l~~~--~~~~vv~G~d~~fg~~~~~~~~~l~~~g~~~~~~~---~~~~~vSSt-~ 128 (136)
T cd02170 63 KYVDEVILG--------HPWSYFKPLEEL--KPDVIVLGDDQKNGVDEEEVYEELKKRGKVIEVPR---KKTEGISSS-D 128 (136)
T ss_pred CCcCEEEEC--------CCCCHhHHHHHH--CCCEEEECCCCCCCCcchhHHHHHHHCCeEEEECC---CCCCCCcHH-H
Confidence 345665543 245677666555 44555555777664 344456666655443 334557774 4
Q ss_pred EEec
Q 023972 98 VINS 101 (274)
Q Consensus 98 ii~~ 101 (274)
+++.
T Consensus 129 Ir~~ 132 (136)
T cd02170 129 IIKR 132 (136)
T ss_pred HHHH
Confidence 4443
No 174
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=47.71 E-value=40 Score=28.43 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=25.4
Q ss_pred HHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecC
Q 023972 48 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 48 ~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~ 84 (274)
.++..++ -|+.||+-.|+.+|+++|++-|-+-.
T Consensus 180 ~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 180 WIQDKNI----RIHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred HHHhcCc----eEEecCCchhhhHHHhcCccceeEEe
Confidence 5555544 47779999999999999988766643
No 175
>PRK14132 riboflavin kinase; Provisional
Probab=46.72 E-value=1.2e+02 Score=23.78 Aligned_cols=100 Identities=17% Similarity=0.085 Sum_probs=53.6
Q ss_pred eEeEEEEeccCCCccccC-------------c---c-ceecCCCCCCCCCCCCCCceEEEEEEEcCCeEEEEEEEecCCC
Q 023972 129 YIGGPVVKGLGRGSKVLG-------------I---P-TANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 191 (274)
Q Consensus 129 ~i~G~Vv~G~~~g~~~lg-------------~---p-TaN~~~~~~~~~~p~~~~GvY~~~~~~~~~~~~~~~~~iG~~p 191 (274)
.+.|+|+.|-+-|+.-+. | | |.|+.+++.. .+.. ..++-.---.+++++.|.+.+. ..
T Consensus 2 ~l~G~VvSGlGEG~yyvsl~~Y~~qf~~~LGf~PyPGTLNi~l~~~~-~~~~-~~~i~i~gf~~~~~r~fGv~~~---~~ 76 (126)
T PRK14132 2 KIFGRVVSGLGEGAYFLSLPPYKEKFKEKLGFTPYEGTLNIKLGENF-NIDI-FNYIETEDFEINGKKFFGVKVL---PI 76 (126)
T ss_pred EEEEEEecccccceEEEeCHHHHHHHHHHhCCcCCCCcEEEEecchh-hhhh-CCCEeecCceecCCceEEEEEE---EE
Confidence 478999999998875444 3 2 9999886532 1111 1233221111222233321111 11
Q ss_pred eecCCCceeeeeEcccCCcccCCC-eEEEEEccccCCCCCCCCH
Q 023972 192 YFDNAEKTIEPWLLHEFDEDFYDE-ELHLVIVGYIRPEANFPSL 234 (274)
Q Consensus 192 t~~~~~~~~E~~i~~df~~dlyg~-~~~v~~~~~iR~e~~f~~~ 234 (274)
+..+....++.||+- -...-|.. .++|.-=..||++.+..+-
T Consensus 77 ~i~~~~~~i~~aiV~-P~rT~h~~~~lEiIAp~~LR~~L~LkDG 119 (126)
T PRK14132 77 AILNKGKEIDGAIVF-PKKTDHSKNVLEIIAPIKLRKFLNLKDG 119 (126)
T ss_pred EEecCCCceeEEEEE-eccCCCCCCeEEEECCcchHhhcCCCCC
Confidence 221112357888883 45556755 6777777888887766543
No 176
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=45.69 E-value=26 Score=32.55 Aligned_cols=84 Identities=13% Similarity=0.232 Sum_probs=50.6
Q ss_pred CEEEcCCChHHHHHHHHHHc--CCCCCCcEEEecCCC-----CCCCC----CHH----HH-----------------HHH
Q 023972 1 MALASNSHRATIESKISYQH--GWNESFSVIVGSDEV-----RTGKP----SPD----IF-----------------LEA 48 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~--gl~~~Fd~v~~~~~~-----~~~KP----~pe----~f-----------------~~~ 48 (274)
+.++||++-..+..-+.-.. .+.+.||.|+.-.+- ..++| +.+ .| ...
T Consensus 259 lFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~klekgkiYy~G~l~~f 338 (510)
T KOG2470|consen 259 LFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVDKLEKGKIYYQGNLKSF 338 (510)
T ss_pred EEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhhhcccCceeeeccHHHH
Confidence 45899999998876552222 456889988875321 11111 111 11 112
Q ss_pred HHHhCCCCCcEEEEecCHh-hHHHH-HHcCCEEEEecC
Q 023972 49 AKRLNMEPSSSLVIEDSVI-GVVAG-KAAGMEVVAVPS 84 (274)
Q Consensus 49 l~~l~v~p~~~vvvgD~~~-di~aA-~~aGi~vi~V~~ 84 (274)
++.-+..-.+++++||..+ |++.- .++|+++-++-+
T Consensus 339 lelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 339 LELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred HHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 2223455668999999998 76654 488998876654
No 177
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=45.33 E-value=68 Score=32.58 Aligned_cols=68 Identities=15% Similarity=0.175 Sum_probs=45.3
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEE
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 81 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~ 81 (274)
.++|......+.. +.+.+|+.++ ++ .-.|+.=...++.+.-....+.|+||..+|..+-+++++.+..
T Consensus 466 ~miTGD~~~ta~~-iA~~lGI~~v----~a-------~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm 533 (675)
T TIGR01497 466 IMITGDNRLTAAA-IAAEAGVDDF----IA-------EATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAM 533 (675)
T ss_pred EEEcCCCHHHHHH-HHHHcCCCEE----Ec-------CCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 5788888887765 5488888543 22 2344544444444433334789999999999999998876543
No 178
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=45.24 E-value=1.2e+02 Score=29.71 Aligned_cols=70 Identities=17% Similarity=0.176 Sum_probs=52.6
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCC----CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~----~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG 76 (274)
++|+|-.....+...+.+ +-|.|..-++. ..+.|..+...+.++++++..+..++++|++.-.+.-+.-+
T Consensus 274 Lav~SKN~~~da~evF~k------hp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~ 347 (574)
T COG3882 274 LAVCSKNTEKDAKEVFRK------HPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKREL 347 (574)
T ss_pred EEEecCCchhhHHHHHhh------CCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcC
Confidence 478887777777765533 33445544432 36788999999999999999999999999999887776654
No 179
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase.
Probab=43.91 E-value=14 Score=28.53 Aligned_cols=49 Identities=20% Similarity=0.096 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEEEEecCCCCcccccccc
Q 023972 40 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAA 95 (274)
Q Consensus 40 P~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~vi~V~~~~~~~~~iSss 95 (274)
.+++.|.+.++++++ +.++++.|+..+.+.-++.| +++.++. +..+||+
T Consensus 72 ~~~~~f~~~~~~l~~--~~vv~G~d~~g~~~~l~~~~-~v~~~~~----~~~iSSt 120 (129)
T cd02171 72 TNWEQKIEDIKKYNV--DVFVMGDDWEGKFDFLKEYC-EVVYLPR----TKGISST 120 (129)
T ss_pred CCccChHHHHHHhCC--CEEEECCCCcchHHHHHhCc-EEEEeCC----CCCcChH
Confidence 355667776677755 45555566654556556664 6777763 3456764
No 180
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=43.58 E-value=1.2e+02 Score=25.61 Aligned_cols=79 Identities=10% Similarity=-0.021 Sum_probs=46.4
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecC-CCCC-CC-----CCHHHHHHHH-HHhCCCCCcEEEEecCHhhHHHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSD-EVRT-GK-----PSPDIFLEAA-KRLNMEPSSSLVIEDSVIGVVAG 72 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~-~~~~-~K-----P~pe~f~~~l-~~l~v~p~~~vvvgD~~~di~aA 72 (274)
++|+||+....++... +..++..- +.++|.+ ++.. ++ ...+.=+..+ +.++.+...+...||+..|+.+-
T Consensus 114 v~IvSas~~~~~~~ia-~~~~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL 191 (210)
T TIGR01545 114 IWLITGSPQPLVEAVY-FDSNFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLL 191 (210)
T ss_pred EEEEcCCcHHHHHHHH-Hhcccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHH
Confidence 5799999999888544 56555332 3445543 2100 11 1111112223 33454556677889999999999
Q ss_pred HHcCCEEEE
Q 023972 73 KAAGMEVVA 81 (274)
Q Consensus 73 ~~aGi~vi~ 81 (274)
.-++-.+.+
T Consensus 192 ~~a~~~~~V 200 (210)
T TIGR01545 192 AFCEHRWRV 200 (210)
T ss_pred HhCCCcEEE
Confidence 888866544
No 181
>PRK00234 Maf-like protein; Reviewed
Probab=39.26 E-value=80 Score=26.61 Aligned_cols=43 Identities=19% Similarity=0.138 Sum_probs=26.9
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
.++|++++.. .|++.+|+. |+.+... +|....+.+|..|...+
T Consensus 5 ILAS~SprR~---elL~~~gi~--f~v~~~~iDE~~~~~~~p~~~v~~l 48 (192)
T PRK00234 5 LLASSSPYRR---ELLARLRLP--FTWASPDIDESHRPDESAEELVRRL 48 (192)
T ss_pred EEecCCHHHH---HHHHHCCCC--cEEECCCCCCCCCCCCCHHHHHHHH
Confidence 5677777773 455888884 6644332 34344556798888744
No 182
>PRK14361 Maf-like protein; Provisional
Probab=39.25 E-value=89 Score=26.24 Aligned_cols=44 Identities=23% Similarity=0.312 Sum_probs=26.0
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l 49 (274)
+.++|.+++.. .|++.+|+. |..+....|-...+.+|..+...+
T Consensus 1 lILAS~SprR~---elL~~~g~~--f~v~~~~~dE~~~~~~p~~~v~~l 44 (187)
T PRK14361 1 VILASGSPRRR---ELLENLGVP--FQVVVSGEAEDSTETDPARLAAEL 44 (187)
T ss_pred CEEccCCHHHH---HHHHHCCCC--cEEECCCCCCCCCCCCHHHHHHHH
Confidence 45677777773 455888884 554333222222456788888744
No 183
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=38.81 E-value=29 Score=25.70 Aligned_cols=28 Identities=18% Similarity=0.148 Sum_probs=23.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHcCCcc
Q 023972 229 ANFPSLETLIAKIHEDRKVAERALDLPL 256 (274)
Q Consensus 229 ~~f~~~~~l~~qi~~D~~~a~~~~~~~~ 256 (274)
..|++.+|=.+.++++|+.||+-|++..
T Consensus 61 ~tFnDcpeA~~eL~~eI~eAK~dLr~kG 88 (91)
T PF08285_consen 61 ATFNDCPEAAKELQKEIKEAKADLRKKG 88 (91)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999886543
No 184
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=37.66 E-value=93 Score=23.03 Aligned_cols=64 Identities=16% Similarity=0.047 Sum_probs=33.6
Q ss_pred EEEcCCCh---HHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCC
Q 023972 2 ALASNSHR---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 77 (274)
Q Consensus 2 aIvSn~~~---~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi 77 (274)
.++||++. ......| +.+|+.-..+.|+++.. .....+++. ....++.++|.. .-.+..+++|+
T Consensus 34 ~~lTNns~~s~~~~~~~L-~~~Gi~~~~~~i~ts~~---------~~~~~l~~~-~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 34 VFLTNNSSRSREEYAKKL-KKLGIPVDEDEIITSGM---------AAAEYLKEH-KGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-SSS-HHHHHHHH-HHTTTT--GGGEEEHHH---------HHHHHHHHH-TTSSEEEEES-H-HHHHHHHHTTE
T ss_pred EEEeCCCCCCHHHHHHHH-HhcCcCCCcCEEEChHH---------HHHHHHHhc-CCCCEEEEEcCH-HHHHHHHHcCC
Confidence 57888752 3344456 67888755577777654 333444442 123566666543 33445566665
No 185
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain. Cytidylyltransferase-like domain. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.
Probab=34.90 E-value=51 Score=25.26 Aligned_cols=67 Identities=19% Similarity=0.202 Sum_probs=34.3
Q ss_pred CcEEEecCCCCCCCCCHHHHHH-HHHHhCCCCCcEEEEecCHhhHH-----HHHH--cCCEEEEecCCCCcccccccc
Q 023972 26 FSVIVGSDEVRTGKPSPDIFLE-AAKRLNMEPSSSLVIEDSVIGVV-----AGKA--AGMEVVAVPSLPKQTHRYTAA 95 (274)
Q Consensus 26 Fd~v~~~~~~~~~KP~pe~f~~-~l~~l~v~p~~~vvvgD~~~di~-----aA~~--aGi~vi~V~~~~~~~~~iSss 95 (274)
++.+...+........+..|.. .+..+ .+..++++.|+.+|.. ..++ .++.++.++... .+..+||+
T Consensus 64 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~G~d~~~~~~~~~~~~~~~~~~~~~vv~~~~~~-~~~~iSSt 138 (143)
T cd02039 64 RLKVVPVDFPEVKILLAVVFILKILLKV--GPDKVVVGEDFAFGKNASYNKDLKELFLDIEIVEVPRVR-DGKKISST 138 (143)
T ss_pred CcEEEEEecChhhccCHHHHHHHHHHHc--CCcEEEECCccccCCchhhhHHHHHhCCceEEEeeEecC-CCcEEehH
Confidence 3444444322222233444543 44444 4567777788887753 2223 456666665532 44557774
No 186
>PRK00884 Maf-like protein; Reviewed
Probab=34.41 E-value=1.1e+02 Score=25.80 Aligned_cols=43 Identities=21% Similarity=0.136 Sum_probs=26.4
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
.++|.+++.. .|++.+|+. |+.+... +|....+.+|..+...+
T Consensus 5 ILAS~SprR~---elL~~~g~~--f~v~~~~idE~~~~~~~p~~~v~~l 48 (194)
T PRK00884 5 ILASTSPYRR---ALLEKLQLP--FECAAPEVDETPRPGESPRQLVLRL 48 (194)
T ss_pred EEeCCCHHHH---HHHHHCCCC--CEEECCCCCCCCCCCCCHHHHHHHH
Confidence 5677777763 455888884 6644332 34334456788888744
No 187
>PF14819 QueF_N: Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term; PDB: 3UXV_C 3RJB_A 3BP1_D 3RZP_B 3RJ4_A 3UXJ_C 3S19_D 3RZQ_B.
Probab=33.36 E-value=46 Score=25.48 Aligned_cols=21 Identities=33% Similarity=0.431 Sum_probs=16.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 023972 228 EANFPSLETLIAKIHEDRKVA 248 (274)
Q Consensus 228 e~~f~~~~~l~~qi~~D~~~a 248 (274)
+-+|+|.+++.+.|.+|+..+
T Consensus 81 qtrf~s~~~v~~~i~~DLS~~ 101 (110)
T PF14819_consen 81 QTRFESWEAVQATIERDLSAA 101 (110)
T ss_dssp T-B-S-HHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHH
Confidence 457999999999999999876
No 188
>PF00567 TUDOR: Tudor domain; InterPro: IPR008191 There are multiple copies of this domain in the Drosophila melanogaster tudor protein and it has been identified in several RNA-binding proteins []. Although the function of this domain is unknown, in Drosophila melanogaster the tudor protein is required during oogenesis for the formation of primordial germ cells and for normal abdominal segmentation [].; PDB: 3NTI_A 3NTK_B 3NTH_A 2DIQ_A 3FDR_A 3PNW_O 3S6W_A 3PMT_A 2WAC_A 2O4X_A ....
Probab=32.16 E-value=1e+02 Score=22.55 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=27.0
Q ss_pred CceEEEEEEEcCCeEEEEEEEecCCCeecCCCceeeeeEcccCCcccCCCeEEEE
Q 023972 166 SGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLV 220 (274)
Q Consensus 166 ~GvY~~~~~~~~~~~~~~~~~iG~~pt~~~~~~~~E~~i~~df~~dlyg~~~~v~ 220 (274)
.+.+.+.+..+ +.||.|.+ +.......++++++| ||....|.
T Consensus 55 ~~~~~~~~~~~-~~w~Ra~I------~~~~~~~~~~V~~iD------~G~~~~v~ 96 (121)
T PF00567_consen 55 GEGCLCVVSED-GRWYRAVI------TVDIDENQYKVFLID------YGNTEKVS 96 (121)
T ss_dssp TEEEEEEETTT-SEEEEEEE------EEEECTTEEEEEETT------TTEEEEEE
T ss_pred CCEEEEEEecC-CceeeEEE------EEecccceeEEEEEe------cCceEEEc
Confidence 34454554444 59999988 333345688999997 55555544
No 189
>PRK00148 Maf-like protein; Reviewed
Probab=31.46 E-value=1.3e+02 Score=25.30 Aligned_cols=43 Identities=30% Similarity=0.264 Sum_probs=25.6
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
.++|++++.. .|++.+|+. |..+... +|......+|..+...+
T Consensus 4 ILAS~SprR~---elL~~~g~~--f~~~~~~idE~~~~~~~p~~~v~~l 47 (194)
T PRK00148 4 VLASASPARL---KLLRLAGIP--PLVVVSHVDEDAIAASSPSELVQAL 47 (194)
T ss_pred EEeCCCHHHH---HHHHHCCCC--eEEECCCCCCCCCCCCCHHHHHHHH
Confidence 5677777773 455888873 5533222 23334456788888744
No 190
>PRK04694 Maf-like protein; Reviewed
Probab=31.46 E-value=1.3e+02 Score=25.24 Aligned_cols=43 Identities=28% Similarity=0.352 Sum_probs=25.3
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
.++|++++. ..|++.+|+. |+.+... +|......+|..|...+
T Consensus 3 ILAS~SprR---~elL~~~g~~--f~~~~~~idE~~~~~~~p~~~v~~l 46 (190)
T PRK04694 3 YLASRSPRR---RELLQRLDVP--FQTLQLDVPEVRAADESPDHYVQRV 46 (190)
T ss_pred EEcCCCHHH---HHHHHHCCCC--cEEecCCCCCCCCCCCCHHHHHHHH
Confidence 466777666 3455888883 6544322 34334456788887744
No 191
>PRK00648 Maf-like protein; Reviewed
Probab=31.05 E-value=1.6e+02 Score=24.76 Aligned_cols=43 Identities=23% Similarity=0.184 Sum_probs=25.9
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec--CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS--DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~--~~~~~~KP~pe~f~~~l 49 (274)
.++|.+++. ..|++.+|+. |+.+-.+ ++......+|..+...+
T Consensus 6 ILAS~SprR---~elL~~~g~~--f~v~~~~~~dE~~~~~~~p~~~v~~l 50 (191)
T PRK00648 6 ILASSSPRR---KEILEGFRIP--FEVVPSPFVEESYPYSLDPEEITLEL 50 (191)
T ss_pred EEeCCCHHH---HHHHHHCCCC--eEEEeCCCCCCCCCCCCCHHHHHHHH
Confidence 567777776 3455888883 6655222 33334456788888744
No 192
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=30.07 E-value=1.8e+02 Score=29.56 Aligned_cols=66 Identities=11% Similarity=0.112 Sum_probs=45.0
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v 79 (274)
.++|+.....+.. +.+.+|+.++| +.-.|+.=.+.++.++-.-..+.|+||-.+|.-+-+++.+-+
T Consensus 461 vMiTGDn~~TA~a-IA~elGI~~v~-----------A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGI 526 (673)
T PRK14010 461 VMCTGDNELTAAT-IAKEAGVDRFV-----------AECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGL 526 (673)
T ss_pred EEECCCCHHHHHH-HHHHcCCceEE-----------cCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEE
Confidence 4778888887764 55888886432 233556666666655444346889999999988888876543
No 193
>PF03622 IBV_3B: IBV 3B protein ; InterPro: IPR005295 These proteins are the product of ORF 3B from Infectious bronchitis virus). Currently, the function of this protein remains unknown [].
Probab=29.34 E-value=65 Score=21.78 Aligned_cols=38 Identities=18% Similarity=0.359 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCccccCC-----CCCCCCcccc
Q 023972 233 SLETLIAKIHEDRKVAERALDLPLYSKY-----RDDPYLKITS 270 (274)
Q Consensus 233 ~~~~l~~qi~~D~~~a~~~~~~~~~~~~-----~~~~~~~~~~ 270 (274)
.-+++++||.-|.+.....|+..-|.|| +.-+|++..|
T Consensus 10 tG~qviqqisf~Lq~ISsvl~t~iFDPFE~cyyrgGsfwEieS 52 (64)
T PF03622_consen 10 TGEQVIQQISFNLQHISSVLNTEIFDPFEVCYYRGGSFWEIES 52 (64)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEEecCcEEEeec
Confidence 4578999999999999999988877665 3444544433
No 194
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=29.15 E-value=1.5e+02 Score=27.35 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=45.4
Q ss_pred EEEcCCC--hHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHH---HHHHhCCCCCcEEEEecCHh---hHHHHH
Q 023972 2 ALASNSH--RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE---AAKRLNMEPSSSLVIEDSVI---GVVAGK 73 (274)
Q Consensus 2 aIvSn~~--~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~---~l~~l~v~p~~~vvvgD~~~---di~aA~ 73 (274)
.|+|+.. ..+..... +.+++ ...|.....+....++--...... .+.+. +|+-+++.||+.. +..+|.
T Consensus 13 li~tG~H~~~~~g~~~~-~~f~i-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~Pd~Vlv~GD~~~~la~alaA~ 88 (346)
T PF02350_consen 13 LIVTGQHLDPEMGDTFF-EGFGI-PKPDYLLDSDSQSMAKSTGLAIIELADVLERE--KPDAVLVLGDRNEALAAALAAF 88 (346)
T ss_dssp EEEECSS--CHHHHHHH-HHTT---SEEEE--STTS-HHHHHHHHHHHHHHHHHHH--T-SEEEEETTSHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHH-hhCCC-CCCCcccccccchHHHHHHHHHHHHHHHHHhc--CCCEEEEEcCCchHHHHHHHHH
Confidence 4677766 66666544 67777 677777765543333333333322 33444 6777888899975 466788
Q ss_pred HcCCEEEEecCC
Q 023972 74 AAGMEVVAVPSL 85 (274)
Q Consensus 74 ~aGi~vi~V~~~ 85 (274)
..+++++.+..+
T Consensus 89 ~~~ipv~HieaG 100 (346)
T PF02350_consen 89 YLNIPVAHIEAG 100 (346)
T ss_dssp HTT-EEEEES--
T ss_pred HhCCCEEEecCC
Confidence 899999999887
No 195
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=28.80 E-value=1.5e+02 Score=30.44 Aligned_cols=63 Identities=22% Similarity=0.236 Sum_probs=42.3
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcC
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 76 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aG 76 (274)
.++|+..+..++. +.+.+|+++++ +.-.|+.=.+.++++.-.-..+.||||-.+|.-+-..+.
T Consensus 557 ~mLTGDn~~~A~~-iA~~lGId~v~-----------AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~Ad 619 (713)
T COG2217 557 VMLTGDNRRTAEA-IAKELGIDEVR-----------AELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAAD 619 (713)
T ss_pred EEEcCCCHHHHHH-HHHHcChHhhe-----------ccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcC
Confidence 5788888887774 54788885432 233455555666666543368999999999976655554
No 196
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=28.40 E-value=1.7e+02 Score=26.62 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=42.5
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHH---HHHHhCCCCCcEEEEecCHh---hHHHHHHc
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE---AAKRLNMEPSSSLVIEDSVI---GVVAGKAA 75 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~---~l~~l~v~p~~~vvvgD~~~---di~aA~~a 75 (274)
.|+|+.........+ +.+++...++..+........+-.+..... .+++. +|+-+++.||+.. +..+|...
T Consensus 33 ~~~tg~h~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDiv~~~gd~~~~la~a~aa~~~ 109 (365)
T TIGR00236 33 VIVTAQHREMLDQVL-DLFHLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLEE--KPDIVLVQGDTTTTLAGALAAFYL 109 (365)
T ss_pred EEEeCCCHHHHHHHH-HhcCCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHHc--CCCEEEEeCCchHHHHHHHHHHHh
Confidence 366776665555433 557776434433333211222222232222 33444 3444444488754 56678889
Q ss_pred CCEEEEecCC
Q 023972 76 GMEVVAVPSL 85 (274)
Q Consensus 76 Gi~vi~V~~~ 85 (274)
|++++.+..+
T Consensus 110 ~ipv~h~~~g 119 (365)
T TIGR00236 110 QIPVGHVEAG 119 (365)
T ss_pred CCCEEEEeCC
Confidence 9999887543
No 197
>PRK00032 Maf-like protein; Reviewed
Probab=28.09 E-value=1.6e+02 Score=24.72 Aligned_cols=43 Identities=33% Similarity=0.382 Sum_probs=26.1
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
.++|++++.. .|++.+|+ .|+.+... +|......+|..+...+
T Consensus 5 ILAS~SprR~---elL~~~g~--~f~v~~~~idE~~~~~~~p~~~v~~l 48 (190)
T PRK00032 5 YLASGSPRRR---ELLTQLGV--PFEVLVPGIEEQRQPGESAQQYVERL 48 (190)
T ss_pred EEeCCCHHHH---HHHHHCCC--CeEEEcCCCCCCCCCCCCHHHHHHHH
Confidence 5677777773 45588888 36644322 33334456788887744
No 198
>COG0424 Maf Nucleotide-binding protein implicated in inhibition of septum formation [Cell division and chromosome partitioning]
Probab=27.51 E-value=1.9e+02 Score=24.45 Aligned_cols=44 Identities=27% Similarity=0.277 Sum_probs=26.2
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCC-CHHHHHHHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP-SPDIFLEAA 49 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP-~pe~f~~~l 49 (274)
+.++|++++. ..|++.+|+ .|..+...-|....+. .|+.+...+
T Consensus 5 LiLAS~SPrR---~elL~~~gi--~f~~~~~~iDE~~~~~~~P~~~v~~L 49 (193)
T COG0424 5 LILASSSPRR---RELLEQLGI--PFEVIPSDIDEPLLKAEEPREYVLRL 49 (193)
T ss_pred EEEecCCHHH---HHHHHHCCC--CeEEecCCCCCCcccCCCHHHHHHHH
Confidence 3577888877 345688888 4555544433232222 388887743
No 199
>PRK14366 Maf-like protein; Provisional
Probab=27.33 E-value=1.8e+02 Score=24.59 Aligned_cols=45 Identities=22% Similarity=0.159 Sum_probs=26.3
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
+.++|++++.. .|++.+|+. +|..+... +|....+.+|..+...+
T Consensus 7 iILAS~SprR~---elL~~~G~~-~~~v~~~~iDE~~~~~~~p~~~v~~l 52 (195)
T PRK14366 7 LILASSSKQRL---ALLEQIGVV-PGEIVSPDIDESPLKKELPKDYSIRM 52 (195)
T ss_pred EEEeCCCHHHH---HHHHhCCCC-CCEEeCCCCCCCCCCCCCHHHHHHHH
Confidence 35778887773 455888874 34433222 34344456788887744
No 200
>cd03123 alpha_CA_VI_IX_XII_XIV Carbonic anhydrase alpha, isozymes VI, IX, XII and XIV. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Alpha CAs are mostly monomeric enzymes. The zinc ion is complexed by three histidine residues. This sub-family comprises the secreted CA VI, which is found in saliva, for example, and the membrane proteins CA IX, XII, and XIV.
Probab=27.26 E-value=65 Score=28.25 Aligned_cols=61 Identities=20% Similarity=0.176 Sum_probs=38.1
Q ss_pred EEEEEE--ecCCCeecCCCceeeeeEcccCCcccCC----------CeEEEEEccccCCCCCCCCHHHHHHHHHH
Q 023972 181 YKMVMS--IGWNPYFDNAEKTIEPWLLHEFDEDFYD----------EELHLVIVGYIRPEANFPSLETLIAKIHE 243 (274)
Q Consensus 181 ~~~~~~--iG~~pt~~~~~~~~E~~i~~df~~dlyg----------~~~~v~~~~~iR~e~~f~~~~~l~~qi~~ 243 (274)
+.|..+ -|.-.++++..-.+|.||.+ ++.|.|+ .-.-|.++--+-+ .+=..++.+...+..
T Consensus 84 HwG~~~~~~gSEH~idG~~yp~E~HlVh-~n~~~y~~~~~A~~~~~~laVl~v~~~~~~-~~n~~~~~i~~~l~~ 156 (248)
T cd03123 84 HWGGRGSLSGSEHTIDGIRFAAELHIVH-YNSDKYSSFDEAADKPDGLAVLAILIEVGY-PENTYYEKIISHLHE 156 (248)
T ss_pred eeCCCCCCCCccceecCccCcceeEEEE-EcccccCCHHHHhcCCCCeEEEEEEEEecC-CCCccHHHHHHHHHh
Confidence 344433 57788898888889999998 8888885 2233344434432 222456666666654
No 201
>COG2904 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.69 E-value=58 Score=25.55 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 023972 228 EANFPSLETLIAKIHEDRKVA 248 (274)
Q Consensus 228 e~~f~~~~~l~~qi~~D~~~a 248 (274)
+-+|++.|+|..-|++|...+
T Consensus 101 qt~f~s~e~v~~~l~~DLS~c 121 (137)
T COG2904 101 QTKFASWEEVRQTLQRDLSAC 121 (137)
T ss_pred hHhhccHHHHHHHHHHHHHHH
Confidence 467999999999999998765
No 202
>PRK14362 Maf-like protein; Provisional
Probab=26.69 E-value=1.6e+02 Score=25.12 Aligned_cols=43 Identities=30% Similarity=0.368 Sum_probs=26.0
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CC-CCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DE-VRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~-~~~~KP~pe~f~~~l 49 (274)
.++|++++.. .|++.+|+. |..+... +| ......+|..+...+
T Consensus 15 ILAS~SprR~---eLL~~~g~~--f~v~~~~~dEe~~~~~~~p~~~v~~l 59 (207)
T PRK14362 15 VLASGSPRRR---EFLEQMGLP--FEVILPGAAEPSPIEGEQPEAYARRA 59 (207)
T ss_pred EEeCCCHHHH---HHHHHCCCC--cEEECCCCCCCCCCCCCCHHHHHHHH
Confidence 5677777773 455888883 6654333 23 334455688887744
No 203
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=26.24 E-value=1.3e+02 Score=27.35 Aligned_cols=49 Identities=24% Similarity=0.162 Sum_probs=33.8
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhH------HHHHHcCCEEEEecC
Q 023972 36 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV------VAGKAAGMEVVAVPS 84 (274)
Q Consensus 36 ~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di------~aA~~aGi~vi~V~~ 84 (274)
...-|+++.|.+.+..+|++++..|++.|...+. -..+.+|++-+.+-.
T Consensus 82 ~~~lp~~~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~Ld 136 (320)
T PLN02723 82 PHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLD 136 (320)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcC
Confidence 3456788999999999999988888886643222 235667886444433
No 204
>TIGR00172 maf MAF protein. This nonessential gene causes inhibition of septation when overexpressed. A member of the family is found in the Archaeon Pyrococcus horikoshii and another in the round worm Caenorhabditis elegans.
Probab=26.02 E-value=2.4e+02 Score=23.51 Aligned_cols=60 Identities=23% Similarity=0.296 Sum_probs=32.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHHHHhC------CCCCcEEEEecC
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAAKRLN------MEPSSSLVIEDS 65 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l~~l~------v~p~~~vvvgD~ 65 (274)
+.++|++++. ..|++.+|+. |..+-.. +|.....-+|..+...+.+.. ..|+.+|+..|+
T Consensus 5 lILAS~SprR---~elL~~~g~~--f~v~~~~idE~~~~~~~p~~~~~~lA~~Ka~~v~~~~~~~~vI~aDT 71 (183)
T TIGR00172 5 LILASQSPRR---KELLEELGIS--FEQIVSEFDEKSLKTTSPRELVYRLAKEKAQAVAELLADALIIGADT 71 (183)
T ss_pred EEEeCCCHHH---HHHHHHCCCC--eEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEeCe
Confidence 3567777777 3455888873 6543322 233334456888877442221 124445555665
No 205
>PRK14368 Maf-like protein; Provisional
Probab=25.12 E-value=2.5e+02 Score=23.62 Aligned_cols=43 Identities=26% Similarity=0.210 Sum_probs=25.9
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
.++|.+++. ..|++.+|+ .|+.+... +|......+|..+...+
T Consensus 8 ILAS~SprR---~eLL~~~g~--~f~v~~~~iDE~~~~~~~p~~~v~~l 51 (193)
T PRK14368 8 VLASASPRR---SELLASAGI--EFDVVPADIPEEPLPGEEPVDHVLRL 51 (193)
T ss_pred EEeCCCHHH---HHHHHHCCC--CeEEEcCCCCCCCCCCCCHHHHHHHH
Confidence 567777777 345588888 36644332 33333456788887744
No 206
>PRK04425 Maf-like protein; Reviewed
Probab=24.75 E-value=2e+02 Score=24.31 Aligned_cols=43 Identities=16% Similarity=-0.001 Sum_probs=25.0
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
.++|.+++. ..|++.+|+. |+.+... +|......+|+.+...+
T Consensus 8 ILAS~SprR---~elL~~~g~~--f~v~~~~iDE~~~~~~~p~~~~~~l 51 (196)
T PRK04425 8 VLGTSSVFR---REQMERLGIA--FQAASPDFDETPMLGESAPQTALRL 51 (196)
T ss_pred EEeCCCHHH---HHHHHHCCCC--eEEECCCCCCCCCCCCCHHHHHHHH
Confidence 567777776 3455888873 5533222 23334556788877643
No 207
>PLN02423 phosphomannomutase
Probab=24.54 E-value=96 Score=26.92 Aligned_cols=35 Identities=11% Similarity=-0.127 Sum_probs=28.1
Q ss_pred HHHhCCCCCcEEEEec----CHhhHHHHHHcCCEEEEecC
Q 023972 49 AKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 49 l~~l~v~p~~~vvvgD----~~~di~aA~~aGi~vi~V~~ 84 (274)
++.+. ++++++.+|| ..+|+++-+.-|+.++.|..
T Consensus 194 l~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 194 LQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred HHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 33333 8899999999 68999999988888888754
No 208
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=24.53 E-value=2.2e+02 Score=29.03 Aligned_cols=66 Identities=15% Similarity=0.176 Sum_probs=44.5
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCHhhHHHHHHcCCEE
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 79 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~~di~aA~~aGi~v 79 (274)
.++|+..+..+.. +.+.+|+.+ ++ +.-.|+.=.+.++.++-.-..+.|+||-.+|.-+-+++.+-+
T Consensus 465 vMiTGDn~~TA~a-IA~elGId~----v~-------A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGI 530 (679)
T PRK01122 465 VMITGDNPLTAAA-IAAEAGVDD----FL-------AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 530 (679)
T ss_pred EEECCCCHHHHHH-HHHHcCCcE----EE-------ccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeE
Confidence 4678888887764 558888854 22 233556655555555444346888899999988888876544
No 209
>PRK01526 Maf-like protein; Reviewed
Probab=24.21 E-value=1.8e+02 Score=24.79 Aligned_cols=43 Identities=21% Similarity=0.081 Sum_probs=24.9
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec--CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS--DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~--~~~~~~KP~pe~f~~~l 49 (274)
.++|++++.. .|++.+|+. |..++.+ +|......+|..+...+
T Consensus 11 ILAS~SprR~---elL~~~g~~--~~~v~~~~iDE~~~~~~~p~~~v~~l 55 (205)
T PRK01526 11 ILASSSPARI---ELLNRIKII--PSQIIPADIDETPNLRELPAPLAIRL 55 (205)
T ss_pred EEeCCCHHHH---HHHHhcCCC--CceEecCCCCCCCCCCCCHHHHHHHH
Confidence 5677777773 455787773 2223333 34334456788887744
No 210
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=24.18 E-value=1.8e+02 Score=24.99 Aligned_cols=71 Identities=15% Similarity=0.174 Sum_probs=41.9
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCC--CC------c--EEEec-C---CCCCCCCCHHHHHHHHHHhCCCCCcEEEEecCH
Q 023972 1 MALASNSHRATIESKISYQHGWNE--SF------S--VIVGS-D---EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 66 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~--~F------d--~v~~~-~---~~~~~KP~pe~f~~~l~~l~v~p~~~vvvgD~~ 66 (274)
++++|+.-+.++.. ....+|+.. .| | -=+.+ + ....+--.++....+ ++ +.+-..++||||-.
T Consensus 107 v~liSGGF~~~i~~-Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l-rk-~~~~~~~~mvGDGa 183 (227)
T KOG1615|consen 107 VYLISGGFRQLIEP-VAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL-RK-NYNYKTIVMVGDGA 183 (227)
T ss_pred EEEEcCChHHHHHH-HHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH-Hh-CCChheeEEecCCc
Confidence 46788888887764 547888864 12 1 11111 1 111122233444333 33 77778999999999
Q ss_pred hhHHHHHH
Q 023972 67 IGVVAGKA 74 (274)
Q Consensus 67 ~di~aA~~ 74 (274)
+|+++...
T Consensus 184 tDlea~~p 191 (227)
T KOG1615|consen 184 TDLEAMPP 191 (227)
T ss_pred cccccCCc
Confidence 99887554
No 211
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=24.07 E-value=1.6e+02 Score=30.04 Aligned_cols=42 Identities=5% Similarity=-0.080 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEE--ecCHhhHHHHHHcCCEEEEec
Q 023972 42 PDIFLEAAKRLNMEPSSSLVI--EDSVIGVVAGKAAGMEVVAVP 83 (274)
Q Consensus 42 pe~f~~~l~~l~v~p~~~vvv--gD~~~di~aA~~aGi~vi~V~ 83 (274)
......+++.++++.++++.+ ||+.+|+.+-+.+|+.++.-.
T Consensus 615 G~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 615 GKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQR 658 (694)
T ss_pred HHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcC
Confidence 345555778888888888888 999999999999999776643
No 212
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=24.04 E-value=1e+02 Score=26.18 Aligned_cols=68 Identities=19% Similarity=0.099 Sum_probs=40.6
Q ss_pred EEEcCCChHHHHHHHHHHcC-CC--CCCcE--------------EEecC--CCCCCCCCHHHHHHHHHHhCCCCCcEEEE
Q 023972 2 ALASNSHRATIESKISYQHG-WN--ESFSV--------------IVGSD--EVRTGKPSPDIFLEAAKRLNMEPSSSLVI 62 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~g-l~--~~Fd~--------------v~~~~--~~~~~KP~pe~f~~~l~~l~v~p~~~vvv 62 (274)
.|+|+.....+...+ +..+ -+ +..|. +...+ .++..|+. .+..+.-+++.+++.
T Consensus 93 iVvSsGm~~fI~~lf-e~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~------vI~~l~e~~e~~fy~ 165 (220)
T COG4359 93 IVVSSGMDPFIYPLF-EGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS------VIHELSEPNESIFYC 165 (220)
T ss_pred EEEeCCCchHHHHHH-HhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch------hHHHhhcCCceEEEe
Confidence 578888888887655 5443 11 11111 11111 24455552 344444466789999
Q ss_pred ecCHhhHHHHHHcC
Q 023972 63 EDSVIGVVAGKAAG 76 (274)
Q Consensus 63 gD~~~di~aA~~aG 76 (274)
||+..|+.+|+...
T Consensus 166 GDsvsDlsaaklsD 179 (220)
T COG4359 166 GDSVSDLSAAKLSD 179 (220)
T ss_pred cCCcccccHhhhhh
Confidence 99999999887653
No 213
>PRK01839 Maf-like protein; Reviewed
Probab=23.98 E-value=2.1e+02 Score=24.45 Aligned_cols=43 Identities=28% Similarity=0.376 Sum_probs=24.6
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCC------CCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEV------RTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~------~~~KP~pe~f~~~l 49 (274)
.++|++++.. .|++.+|+. |+.+... +|. .....+|..|...+
T Consensus 13 ILAS~SprR~---elL~~~gi~--f~v~~~~idE~~~~~~~~~~~~~p~~~v~~l 62 (209)
T PRK01839 13 YLASQSPRRQ---ELLQQLGVR--FELLLPRPDEDAEALEAELPGEAPDDYVQRV 62 (209)
T ss_pred EEeCCCHHHH---HHHHHCCCC--eEEeCCCCCcCccccccCCCCCCHHHHHHHH
Confidence 5677777773 455888884 6544332 221 12235688887743
No 214
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=23.93 E-value=1.9e+02 Score=22.70 Aligned_cols=17 Identities=29% Similarity=0.257 Sum_probs=14.1
Q ss_pred HHHHHHcCCEEEEecCC
Q 023972 69 VVAGKAAGMEVVAVPSL 85 (274)
Q Consensus 69 i~aA~~aGi~vi~V~~~ 85 (274)
+++|++.|+++++--+.
T Consensus 50 v~a~h~~Girv~ay~~~ 66 (132)
T PF14871_consen 50 VEACHERGIRVPAYFDF 66 (132)
T ss_pred HHHHHHCCCEEEEEEee
Confidence 78999999999877554
No 215
>PRK02141 Maf-like protein; Reviewed
Probab=23.65 E-value=3.1e+02 Score=23.40 Aligned_cols=43 Identities=21% Similarity=0.173 Sum_probs=24.7
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
.++|.+++.. .|++.+|+. |+.+... +|....+.+|..+...+
T Consensus 12 ILAS~SprR~---elL~~~G~~--f~v~~~~iDE~~~~~~~p~~~~~~l 55 (207)
T PRK02141 12 ILASSSRYRR---ELLERLRLP--FDVVSPDIDETPLAGETPAATALRL 55 (207)
T ss_pred EEeCCCHHHH---HHHHHCCCC--eEEEcCCCCCCCCCCCCHHHHHHHH
Confidence 5677777773 455888883 6543322 23333445688877633
No 216
>PRK01441 Maf-like protein; Reviewed
Probab=23.48 E-value=2.3e+02 Score=24.11 Aligned_cols=43 Identities=23% Similarity=0.237 Sum_probs=25.3
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec--CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS--DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~--~~~~~~KP~pe~f~~~l 49 (274)
.++|.+++. ..|++.+|+. |..++.+ +|......+|..+...+
T Consensus 8 ILAS~SprR---~elL~~~Gi~--f~~v~~~~iDE~~~~~~~p~~~v~~l 52 (207)
T PRK01441 8 VLASGSPRR---VELLNQAGIE--PDRLMPADIDETPKRAEHPRSLARRL 52 (207)
T ss_pred EEeCCCHHH---HHHHHhcCCC--CeEEeCCCCCCCCCCCCCHHHHHHHH
Confidence 567777776 3455888883 4433333 34333446788887744
No 217
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=23.26 E-value=2e+02 Score=30.30 Aligned_cols=45 Identities=11% Similarity=0.243 Sum_probs=36.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCCcEEEE-ecCHh-hHHHHHHcCCEEEEecC
Q 023972 37 TGKPSPDIFLEAAKRLNMEPSSSLVI-EDSVI-GVVAGKAAGMEVVAVPS 84 (274)
Q Consensus 37 ~~KP~pe~f~~~l~~l~v~p~~~vvv-gD~~~-di~aA~~aGi~vi~V~~ 84 (274)
.-||+...-+..|+++|+ +++|+ ||+.. -...|++.|+..+..+-
T Consensus 723 ~vr~~a~~av~~Lk~~Gi---~v~mLTGDn~~aA~svA~~VGi~~V~aev 769 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGI---KVVMLTGDNDAAARSVAQQVGIDNVYAEV 769 (951)
T ss_pred ccchhHHHHHHHHHhcCc---eEEEEcCCCHHHHHHHHHhhCcceEEecc
Confidence 568888888899999998 67776 99987 67778999977666543
No 218
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=23.15 E-value=1.7e+02 Score=22.83 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=22.3
Q ss_pred HHHHhCCCCCcEEEE----ecCHh---hHHHHHHcCCEEEEec
Q 023972 48 AAKRLNMEPSSSLVI----EDSVI---GVVAGKAAGMEVVAVP 83 (274)
Q Consensus 48 ~l~~l~v~p~~~vvv----gD~~~---di~aA~~aGi~vi~V~ 83 (274)
++..+...|..++++ |.+.+ -++.|++.|+.+|.+.
T Consensus 95 ~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 95 LLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp HHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred HHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 455566788888888 44444 3567899999999874
No 219
>PF14056 DUF4250: Domain of unknown function (DUF4250)
Probab=22.21 E-value=40 Score=22.50 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=26.3
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHcCCccc
Q 023972 224 YIRPEANFPSLETLIAKIHEDRKVAERALDLPLY 257 (274)
Q Consensus 224 ~iR~e~~f~~~~~l~~qi~~D~~~a~~~~~~~~~ 257 (274)
.||+ .|+|+++|.....-|.+...+-|+.-.|
T Consensus 15 kLRD--~~~sLd~Lc~~~~id~~~l~~kL~~~Gy 46 (55)
T PF14056_consen 15 KLRD--EYSSLDELCYDYDIDKEELEEKLASIGY 46 (55)
T ss_pred HHHh--ccCCHHHHHHHhCCCHHHHHHHHHHcCC
Confidence 4777 4679999999999999998888876544
No 220
>PRK04056 Maf-like protein; Reviewed
Probab=22.16 E-value=3e+02 Score=22.91 Aligned_cols=43 Identities=30% Similarity=0.290 Sum_probs=25.3
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCCCCCCHHHHHHHH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAA 49 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~~KP~pe~f~~~l 49 (274)
.++|++++.. .|++.+|+ .|..+... +|-.....+|..+...+
T Consensus 3 ILAS~SprR~---elL~~~g~--~f~v~~~~idE~~~~~~~p~~~v~~l 46 (180)
T PRK04056 3 ILASSSSTRA---NLLKEAGI--EFEQKSLDFDEESIKKTSPKEFVYLA 46 (180)
T ss_pred EEeCCCHHHH---HHHHHCCC--CeEEEcCCCCCCCCCCCCHHHHHHHH
Confidence 4667777663 45588888 36544332 23333446788887744
No 221
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=21.67 E-value=4.2e+02 Score=23.04 Aligned_cols=76 Identities=11% Similarity=0.096 Sum_probs=39.1
Q ss_pred CEEEcCCChHH---HHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHH----HHHhCCCCCcEEE-EecCHhhHHHH
Q 023972 1 MALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA----AKRLNMEPSSSLV-IEDSVIGVVAG 72 (274)
Q Consensus 1 laIvSn~~~~~---~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~----l~~l~v~p~~~vv-vgD~~~di~aA 72 (274)
+.++|+.+... +...| ...|+..+ +.++-...-...| +...|... +.+-|. +++. +||...|+..
T Consensus 139 Vf~lTGR~e~~r~~T~~nL-~~~G~~~~-~~LiLR~~~d~~~-~~~~yKs~~R~~l~~~GY---rIv~~iGDq~sDl~G- 211 (229)
T TIGR01675 139 IFLLSGRWEELRNATLDNL-INAGFTGW-KHLILRGLEDSNK-TVVTYKSEVRKSLMEEGY---RIWGNIGDQWSDLLG- 211 (229)
T ss_pred EEEEcCCChHHHHHHHHHH-HHcCCCCc-CeeeecCCCCCCc-hHhHHHHHHHHHHHhCCc---eEEEEECCChHHhcC-
Confidence 35788887654 55566 56677654 6655543212222 22333221 222233 4444 4999888854
Q ss_pred HHcCCEEEEec
Q 023972 73 KAAGMEVVAVP 83 (274)
Q Consensus 73 ~~aGi~vi~V~ 83 (274)
..+|-++..++
T Consensus 212 ~~~~~RtFKLP 222 (229)
T TIGR01675 212 SPPGRRTFKLP 222 (229)
T ss_pred CCccCceeeCC
Confidence 33444554443
No 222
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=21.50 E-value=6.2e+02 Score=23.03 Aligned_cols=80 Identities=15% Similarity=0.226 Sum_probs=47.0
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCCCCCCCCHHHHHHHHHHhCCC---------------CCcEEEEecCH
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME---------------PSSSLVIEDSV 66 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~~~~KP~pe~f~~~l~~l~v~---------------p~~~vvvgD~~ 66 (274)
.|+|-+....+...|.........|..+++-.- ..-....+.+.+++.|++ .+.++++.|+.
T Consensus 122 ~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESR---P~~eG~~~ak~L~~~gI~~~~I~Dsa~~~~~~~vd~VivGad~I 198 (301)
T COG1184 122 VILTHSFSKTVLEVLKTAADRGKRFKVIVTESR---PRGEGRIMAKELRQSGIPVTVIVDSAVGAFMSRVDKVLVGADAI 198 (301)
T ss_pred EEEEecCcHHHHHHHHHhhhcCCceEEEEEcCC---CcchHHHHHHHHHHcCCceEEEechHHHHHHHhCCEEEECccce
Confidence 367777777777777555555556777766321 222345566678888861 23333334443
Q ss_pred h-h------------HHHHHHcCCEEEEecC
Q 023972 67 I-G------------VVAGKAAGMEVVAVPS 84 (274)
Q Consensus 67 ~-d------------i~aA~~aGi~vi~V~~ 84 (274)
. + ..+|++++.++..+..
T Consensus 199 ~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ae 229 (301)
T COG1184 199 LANGALVNKIGTSPLALAARELRVPFYVVAE 229 (301)
T ss_pred ecCCcEEeccchHHHHHHHHHhCCCEEEEee
Confidence 2 1 3458888888877755
No 223
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=21.41 E-value=1.7e+02 Score=30.09 Aligned_cols=75 Identities=17% Similarity=0.137 Sum_probs=46.6
Q ss_pred EEEcCCChHHHHHHHHHHcCCCCCCcEEEecCCC----------------------CCCCCCHHHHHHHHHHhCCCCCcE
Q 023972 2 ALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------------RTGKPSPDIFLEAAKRLNMEPSSS 59 (274)
Q Consensus 2 aIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~~~~----------------------~~~KP~pe~f~~~l~~l~v~p~~~ 59 (274)
.++|+.....+.. +.+.+|+.+. ++++++. -.++..|+.=.+.++.++-.-..+
T Consensus 462 ~miTGD~~~tA~~-IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~V 537 (755)
T TIGR01647 462 KMVTGDHLAIAKE-TARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLV 537 (755)
T ss_pred EEECCCCHHHHHH-HHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEE
Confidence 4788888887764 5588898642 1221111 123445555445555454343578
Q ss_pred EEEecCHhhHHHHHHcCCEEE
Q 023972 60 LVIEDSVIGVVAGKAAGMEVV 80 (274)
Q Consensus 60 vvvgD~~~di~aA~~aGi~vi 80 (274)
.|+||..+|.-+-+++.+-+.
T Consensus 538 amvGDGvNDapAL~~AdVGIA 558 (755)
T TIGR01647 538 GMTGDGVNDAPALKKADVGIA 558 (755)
T ss_pred EEEcCCcccHHHHHhCCeeEE
Confidence 888999999988888876543
No 224
>cd03126 alpha_CA_XII_XIV Carbonic anhydrase alpha, isozymes XII and XIV. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Most alpha CAs are monomeric enzymes. The zinc ion is complexed by three histidine residues. This sub-family comprises the membrane proteins CA XII and XIV.
Probab=20.70 E-value=1.9e+02 Score=25.31 Aligned_cols=54 Identities=26% Similarity=0.378 Sum_probs=35.1
Q ss_pred ecCCCeecCCCceeeeeEcccCCcccCC---------CeE-EEEEccccCCCCCCCCHHHHHHHHHH
Q 023972 187 IGWNPYFDNAEKTIEPWLLHEFDEDFYD---------EEL-HLVIVGYIRPEANFPSLETLIAKIHE 243 (274)
Q Consensus 187 iG~~pt~~~~~~~~E~~i~~df~~dlyg---------~~~-~v~~~~~iR~e~~f~~~~~l~~qi~~ 243 (274)
-|.-.++++..--+|.||.+ ++.+.|+ ..+ -|.++=-+-. +=..++.+++++..
T Consensus 91 ~gSEH~idG~~y~~E~HlVH-~n~~~y~~~~~A~~~~~glaVl~v~~~~g~--~n~~~~~i~~~l~~ 154 (249)
T cd03126 91 EGSEHTISGKHFAAELHIVH-YNSDKYPDISTAMNKSQGLAVLGILIEVGP--FNPSYEKIFSHLHE 154 (249)
T ss_pred CCceeeecCcccCceEEEEE-ecCccCCCHHHHhhcCCCeEEEEEEEEecC--CChhHHHHHHHhhh
Confidence 57778899888889999999 9888886 232 2233323322 22456667766654
No 225
>PF07624 PSD2: Protein of unknown function (DUF1585); InterPro: IPR011478 This entry represents a conserved region at the C terminus of a family of cytochrome-like proteins found in bacteria such as Rhodopirellula baltica and Solibacter usitatus. These proteins also contain IPR013036 from INTERPRO, IPR013039 from INTERPRO, IPR013042 from INTERPRO and IPR013043 from INTERPRO.
Probab=20.67 E-value=1.1e+02 Score=21.38 Aligned_cols=26 Identities=15% Similarity=0.226 Sum_probs=20.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHcC
Q 023972 228 EANFPSLETLIAKIHEDRKVAERALD 253 (274)
Q Consensus 228 e~~f~~~~~l~~qi~~D~~~a~~~~~ 253 (274)
-.+|+++.+|++.|.++.....++|.
T Consensus 3 G~~f~~~~eLk~~L~~~~~~~~~~~~ 28 (76)
T PF07624_consen 3 GTSFEGAAELKQYLAERKDQFARCFA 28 (76)
T ss_pred CCccCCHHHHHHHHHHCHHHHHHHHH
Confidence 36899999999999999666655553
No 226
>PRK02478 Maf-like protein; Reviewed
Probab=20.39 E-value=2.7e+02 Score=23.52 Aligned_cols=44 Identities=23% Similarity=0.234 Sum_probs=24.5
Q ss_pred CEEEcCCChHHHHHHHHHHcCCCCCCcEEEec-CCCCC------CCCCHHHHHHHH
Q 023972 1 MALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRT------GKPSPDIFLEAA 49 (274)
Q Consensus 1 laIvSn~~~~~~~~~l~~~~gl~~~Fd~v~~~-~~~~~------~KP~pe~f~~~l 49 (274)
+.++|.+++.. .|++.+|+. |+.+... +|... ...+|..+...+
T Consensus 5 iILAS~SprR~---elL~~~g~~--f~v~~~~idE~~~~~~~~~~~~~p~~~v~~l 55 (199)
T PRK02478 5 LILASKSPFRR---ALLENAGLE--FSAAAADIDERAVEAPLEESGATPEDVALVL 55 (199)
T ss_pred EEEeCCCHHHH---HHHHHCCCC--eEEecCCCCCCccccccccCCCCHHHHHHHH
Confidence 35677777773 455888884 6644322 22111 124677777644
No 227
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=20.15 E-value=1.5e+02 Score=30.09 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=32.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCCcEEEE-ecCHh-hHHHHHHcCCEE
Q 023972 37 TGKPSPDIFLEAAKRLNMEPSSSLVI-EDSVI-GVVAGKAAGMEV 79 (274)
Q Consensus 37 ~~KP~pe~f~~~l~~l~v~p~~~vvv-gD~~~-di~aA~~aGi~v 79 (274)
..||+....++.++++|+ +++|+ ||+.. -..-|++.|+.-
T Consensus 441 p~R~~a~e~I~~Lr~~GI---~vvMiTGDn~~TA~aIA~elGI~~ 482 (673)
T PRK14010 441 VIKDGLVERFRELREMGI---ETVMCTGDNELTAATIAKEAGVDR 482 (673)
T ss_pred CCcHHHHHHHHHHHHCCC---eEEEECCCCHHHHHHHHHHcCCce
Confidence 567887888888899998 68888 99987 667799999864
Done!