Query 023975
Match_columns 274
No_of_seqs 193 out of 1937
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 16:01:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dna_A Probable glutathione re 100.0 3.9E-35 1.3E-39 250.1 11.8 251 12-267 4-315 (463)
2 3ef6_A Toluene 1,2-dioxygenase 100.0 3.5E-34 1.2E-38 240.5 16.7 246 13-265 2-282 (410)
3 1ges_A Glutathione reductase; 100.0 3.8E-35 1.3E-39 249.1 10.5 248 12-266 3-311 (450)
4 2wpf_A Trypanothione reductase 100.0 2.2E-35 7.5E-40 253.1 8.9 253 12-265 6-337 (495)
5 3o0h_A Glutathione reductase; 100.0 1.9E-35 6.6E-40 253.2 7.1 251 12-266 25-334 (484)
6 2r9z_A Glutathione amide reduc 100.0 3.4E-34 1.2E-38 244.1 14.4 250 12-266 3-310 (463)
7 3oc4_A Oxidoreductase, pyridin 100.0 1.1E-33 3.9E-38 240.4 17.1 244 14-264 3-285 (452)
8 3ic9_A Dihydrolipoamide dehydr 100.0 3.3E-34 1.1E-38 245.8 13.7 250 13-267 8-322 (492)
9 1fec_A Trypanothione reductase 100.0 8.2E-35 2.8E-39 249.4 10.0 250 13-265 3-333 (490)
10 2qae_A Lipoamide, dihydrolipoy 100.0 1E-34 3.4E-39 248.0 10.5 249 13-266 2-323 (468)
11 4g6h_A Rotenone-insensitive NA 100.0 7.4E-33 2.5E-37 237.2 21.9 251 13-266 42-380 (502)
12 3lxd_A FAD-dependent pyridine 100.0 1.6E-33 5.3E-38 237.2 17.2 247 12-265 8-292 (415)
13 4eqs_A Coenzyme A disulfide re 100.0 4.4E-34 1.5E-38 241.4 13.5 243 15-266 2-284 (437)
14 2hqm_A GR, grase, glutathione 100.0 9.5E-34 3.2E-38 242.4 15.3 248 13-266 11-330 (479)
15 1xdi_A RV3303C-LPDA; reductase 100.0 1.5E-34 5.1E-39 248.6 9.7 249 13-267 2-326 (499)
16 1zk7_A HGII, reductase, mercur 100.0 6.1E-34 2.1E-38 243.1 13.1 249 12-266 3-317 (467)
17 1mo9_A ORF3; nucleotide bindin 100.0 9.1E-34 3.1E-38 244.8 14.3 251 11-267 41-362 (523)
18 3urh_A Dihydrolipoyl dehydroge 100.0 7.2E-35 2.5E-39 250.2 7.2 253 12-267 24-347 (491)
19 3fg2_P Putative rubredoxin red 100.0 5.7E-33 2E-37 232.9 18.5 245 14-265 2-282 (404)
20 3lad_A Dihydrolipoamide dehydr 100.0 2.6E-34 8.9E-39 246.0 9.4 253 12-267 2-327 (476)
21 1onf_A GR, grase, glutathione 100.0 1E-33 3.5E-38 243.3 12.8 242 13-261 2-315 (500)
22 3iwa_A FAD-dependent pyridine 100.0 2.8E-33 9.5E-38 239.3 15.4 248 13-265 3-301 (472)
23 1zmd_A Dihydrolipoyl dehydroge 100.0 6.7E-34 2.3E-38 243.3 11.5 250 13-267 6-329 (474)
24 1ojt_A Surface protein; redox- 100.0 7.6E-34 2.6E-38 243.3 11.8 250 13-267 6-333 (482)
25 2eq6_A Pyruvate dehydrogenase 100.0 2.2E-33 7.6E-38 239.2 13.6 248 13-267 6-318 (464)
26 1dxl_A Dihydrolipoamide dehydr 100.0 3.6E-34 1.2E-38 244.9 8.5 253 12-267 5-326 (470)
27 3dk9_A Grase, GR, glutathione 100.0 1.4E-33 4.6E-38 241.6 11.7 251 13-268 20-341 (478)
28 2cdu_A NADPH oxidase; flavoenz 100.0 9.9E-33 3.4E-37 234.7 16.1 244 14-264 1-288 (452)
29 3ntd_A FAD-dependent pyridine 100.0 6.4E-33 2.2E-37 242.3 15.2 247 14-265 2-310 (565)
30 1ebd_A E3BD, dihydrolipoamide 100.0 5.1E-34 1.8E-38 242.8 7.7 250 13-266 3-316 (455)
31 3kd9_A Coenzyme A disulfide re 100.0 1.6E-32 5.5E-37 233.2 16.7 246 13-265 3-287 (449)
32 3fbs_A Oxidoreductase; structu 100.0 1.1E-33 3.9E-38 227.8 9.1 239 13-266 2-273 (297)
33 3l8k_A Dihydrolipoyl dehydroge 100.0 1.1E-33 3.8E-38 241.3 9.4 246 13-267 4-317 (466)
34 2gqw_A Ferredoxin reductase; f 100.0 1.1E-31 3.7E-36 225.2 21.3 242 12-265 6-280 (408)
35 4fk1_A Putative thioredoxin re 100.0 1.8E-32 6.3E-37 221.5 15.9 238 12-263 5-277 (304)
36 2yqu_A 2-oxoglutarate dehydrog 100.0 1.3E-33 4.4E-38 240.3 9.2 251 13-266 1-310 (455)
37 1q1r_A Putidaredoxin reductase 100.0 6.9E-32 2.3E-36 227.9 19.4 247 12-265 3-291 (431)
38 2a8x_A Dihydrolipoyl dehydroge 100.0 2.6E-33 8.9E-38 239.0 10.1 249 13-267 3-318 (464)
39 4b1b_A TRXR, thioredoxin reduc 100.0 5.8E-33 2E-37 238.6 11.9 253 13-269 42-370 (542)
40 1xhc_A NADH oxidase /nitrite r 100.0 5.8E-32 2E-36 223.6 17.1 236 13-263 8-273 (367)
41 3dgh_A TRXR-1, thioredoxin red 100.0 2.1E-32 7.4E-37 234.4 14.4 250 12-266 8-335 (483)
42 3ics_A Coenzyme A-disulfide re 100.0 3E-32 1E-36 238.9 15.5 247 12-265 35-325 (588)
43 1v59_A Dihydrolipoamide dehydr 100.0 2.9E-33 9.8E-38 239.7 8.9 249 13-266 5-333 (478)
44 3qfa_A Thioredoxin reductase 1 100.0 2.7E-32 9.3E-37 235.2 14.3 251 12-266 31-363 (519)
45 3klj_A NAD(FAD)-dependent dehy 100.0 9.2E-33 3.1E-37 229.5 10.8 234 12-265 8-272 (385)
46 3dgz_A Thioredoxin reductase 2 100.0 2.4E-32 8.2E-37 234.3 13.8 250 12-265 5-334 (488)
47 2bc0_A NADH oxidase; flavoprot 100.0 5.2E-32 1.8E-36 232.3 15.4 245 13-264 35-332 (490)
48 2v3a_A Rubredoxin reductase; a 100.0 1.9E-31 6.6E-36 222.3 16.7 243 13-263 4-282 (384)
49 4gcm_A TRXR, thioredoxin reduc 100.0 6.3E-32 2.2E-36 219.3 12.9 243 9-263 2-283 (312)
50 1lvl_A Dihydrolipoamide dehydr 100.0 4.8E-32 1.6E-36 230.6 12.7 244 13-266 5-313 (458)
51 4a5l_A Thioredoxin reductase; 100.0 1.5E-30 5.1E-35 211.3 19.7 241 12-264 3-290 (314)
52 1m6i_A Programmed cell death p 100.0 3.1E-31 1.1E-35 227.3 16.0 250 12-265 10-325 (493)
53 3hyw_A Sulfide-quinone reducta 100.0 4.1E-30 1.4E-34 217.0 22.4 249 14-265 3-301 (430)
54 3f8d_A Thioredoxin reductase ( 100.0 2E-31 6.9E-36 217.1 13.7 239 12-263 14-292 (323)
55 3cgb_A Pyridine nucleotide-dis 100.0 1.2E-30 4.2E-35 223.2 19.0 246 13-264 36-324 (480)
56 3vrd_B FCCB subunit, flavocyto 100.0 2E-31 6.7E-36 223.6 13.0 250 13-266 2-303 (401)
57 2zbw_A Thioredoxin reductase; 100.0 2E-31 6.7E-36 218.5 12.5 245 12-264 4-293 (335)
58 2q7v_A Thioredoxin reductase; 100.0 1.1E-31 3.8E-36 219.0 10.2 239 12-263 7-289 (325)
59 1nhp_A NADH peroxidase; oxidor 100.0 8.5E-31 2.9E-35 222.5 15.7 244 14-264 1-287 (447)
60 3h8l_A NADH oxidase; membrane 100.0 8.6E-30 2.9E-34 214.1 21.5 246 14-266 2-315 (409)
61 3r9u_A Thioredoxin reductase; 100.0 1.2E-30 4.2E-35 211.8 13.7 241 12-262 3-288 (315)
62 3itj_A Thioredoxin reductase 1 100.0 1.7E-30 5.7E-35 213.1 14.3 240 11-262 20-311 (338)
63 1trb_A Thioredoxin reductase; 100.0 1.9E-30 6.5E-35 211.2 13.4 241 13-263 5-291 (320)
64 3cty_A Thioredoxin reductase; 100.0 1.5E-30 5.1E-35 211.8 11.5 239 12-263 15-293 (319)
65 3ab1_A Ferredoxin--NADP reduct 100.0 3.9E-30 1.3E-34 212.8 13.2 245 12-264 13-304 (360)
66 2q0l_A TRXR, thioredoxin reduc 100.0 3.1E-30 1.1E-34 209.2 12.1 240 13-262 1-285 (311)
67 3lzw_A Ferredoxin--NADP reduct 100.0 3.8E-30 1.3E-34 210.4 12.4 238 13-263 7-290 (332)
68 2x8g_A Thioredoxin glutathione 100.0 9.8E-30 3.4E-34 223.3 15.3 247 11-261 105-436 (598)
69 3h28_A Sulfide-quinone reducta 100.0 1.3E-28 4.3E-33 208.2 20.3 248 13-264 2-300 (430)
70 1fl2_A Alkyl hydroperoxide red 100.0 3.2E-29 1.1E-33 203.1 15.6 238 13-264 1-283 (310)
71 2a87_A TRXR, TR, thioredoxin r 100.0 3.9E-29 1.3E-33 204.8 15.6 240 11-263 12-293 (335)
72 3sx6_A Sulfide-quinone reducta 100.0 3.3E-29 1.1E-33 212.1 15.0 247 13-264 4-311 (437)
73 3d1c_A Flavin-containing putat 100.0 4.8E-29 1.6E-33 206.9 9.9 248 13-267 4-317 (369)
74 1vdc_A NTR, NADPH dependent th 100.0 2E-28 6.8E-33 200.4 12.1 238 13-263 8-300 (333)
75 1hyu_A AHPF, alkyl hydroperoxi 100.0 3.1E-28 1.1E-32 210.0 11.8 239 12-264 211-494 (521)
76 4a9w_A Monooxygenase; baeyer-v 99.9 4.2E-28 1.4E-32 200.1 8.8 236 13-261 3-327 (357)
77 3s5w_A L-ornithine 5-monooxyge 99.9 3E-27 1E-31 201.7 11.0 246 13-263 30-422 (463)
78 2vdc_G Glutamate synthase [NAD 99.9 5.7E-29 2E-33 210.6 0.1 239 11-266 120-425 (456)
79 3k30_A Histamine dehydrogenase 99.9 1.2E-26 4E-31 206.4 4.0 232 11-265 389-656 (690)
80 2xve_A Flavin-containing monoo 99.9 5E-25 1.7E-29 187.5 13.8 227 14-262 3-319 (464)
81 1gte_A Dihydropyrimidine dehyd 99.9 4.7E-26 1.6E-30 209.8 6.4 239 12-266 186-489 (1025)
82 1lqt_A FPRA; NADP+ derivative, 99.9 5.3E-26 1.8E-30 192.7 5.1 239 13-264 3-365 (456)
83 1y56_A Hypothetical protein PH 99.9 2.3E-25 7.8E-30 191.0 8.2 233 13-263 108-356 (493)
84 1o94_A Tmadh, trimethylamine d 99.9 1.9E-26 6.7E-31 205.8 0.9 231 11-262 387-678 (729)
85 2gag_A Heterotetrameric sarcos 99.9 3.9E-25 1.3E-29 202.5 8.2 233 13-265 128-425 (965)
86 2gv8_A Monooxygenase; FMO, FAD 99.9 2.3E-24 7.7E-29 183.0 10.4 229 12-263 5-341 (447)
87 1cjc_A Protein (adrenodoxin re 99.9 8.9E-25 3E-29 185.4 5.6 240 12-264 5-373 (460)
88 3gwf_A Cyclohexanone monooxyge 99.9 2.9E-22 1E-26 173.0 16.9 243 13-261 8-433 (540)
89 1ps9_A 2,4-dienoyl-COA reducta 99.9 3.8E-23 1.3E-27 183.5 9.3 220 11-264 371-654 (671)
90 2ywl_A Thioredoxin reductase r 99.9 1.7E-21 6E-26 145.1 9.5 94 163-264 56-149 (180)
91 3uox_A Otemo; baeyer-villiger 99.8 3.7E-21 1.3E-25 166.3 11.2 144 12-157 8-220 (545)
92 4ap3_A Steroid monooxygenase; 99.8 8.1E-21 2.8E-25 164.3 10.4 144 12-157 20-226 (549)
93 1w4x_A Phenylacetone monooxyge 99.8 2.1E-19 7.3E-24 155.8 14.2 144 12-157 15-221 (542)
94 4b63_A L-ornithine N5 monooxyg 99.7 2.8E-17 9.5E-22 141.0 15.9 163 98-260 199-458 (501)
95 3k7m_X 6-hydroxy-L-nicotine ox 99.6 3.3E-17 1.1E-21 138.4 0.4 96 164-262 205-308 (431)
96 3v76_A Flavoprotein; structura 99.5 1.7E-13 5.7E-18 114.7 13.2 56 163-219 132-187 (417)
97 2cul_A Glucose-inhibited divis 99.5 7.3E-14 2.5E-18 108.0 9.2 56 164-220 69-126 (232)
98 2e5v_A L-aspartate oxidase; ar 99.5 7.8E-15 2.7E-19 124.9 3.7 143 98-261 161-340 (472)
99 4dgk_A Phytoene dehydrogenase; 99.4 1.3E-12 4.3E-17 112.5 13.1 57 163-219 221-278 (501)
100 3nyc_A D-arginine dehydrogenas 99.4 8.3E-13 2.8E-17 109.5 10.2 56 163-219 154-209 (381)
101 3dme_A Conserved exported prot 99.4 5.3E-13 1.8E-17 110.1 8.1 64 163-227 150-216 (369)
102 2gf3_A MSOX, monomeric sarcosi 99.4 4.3E-12 1.5E-16 105.5 11.1 70 147-219 136-205 (389)
103 3dje_A Fructosyl amine: oxygen 99.4 1.4E-11 4.9E-16 104.1 14.2 57 163-219 161-221 (438)
104 1ryi_A Glycine oxidase; flavop 99.3 1E-11 3.6E-16 103.0 12.7 56 163-219 164-219 (382)
105 3ps9_A TRNA 5-methylaminomethy 99.3 1.8E-11 6.1E-16 108.9 14.8 57 163-219 417-473 (676)
106 2i0z_A NAD(FAD)-utilizing dehy 99.3 6E-12 2.1E-16 106.6 10.9 57 163-219 134-191 (447)
107 1rp0_A ARA6, thiazole biosynth 99.3 2.5E-12 8.6E-17 102.4 8.0 97 164-261 120-244 (284)
108 2gqf_A Hypothetical protein HI 99.3 1.7E-11 5.7E-16 102.3 12.7 58 162-220 108-169 (401)
109 4gde_A UDP-galactopyranose mut 99.3 6.2E-13 2.1E-17 114.7 4.1 52 164-217 223-274 (513)
110 1y56_B Sarcosine oxidase; dehy 99.3 4.6E-12 1.6E-16 105.2 8.4 56 163-219 149-205 (382)
111 2x3n_A Probable FAD-dependent 99.3 1.9E-11 6.4E-16 102.1 11.4 57 164-220 108-167 (399)
112 3pvc_A TRNA 5-methylaminomethy 99.3 5.7E-11 1.9E-15 105.9 14.9 57 163-219 412-469 (689)
113 3ka7_A Oxidoreductase; structu 99.3 7.4E-12 2.5E-16 105.4 8.5 62 163-225 196-258 (425)
114 3nrn_A Uncharacterized protein 99.3 7.1E-12 2.4E-16 105.4 8.2 62 162-225 188-249 (421)
115 2oln_A NIKD protein; flavoprot 99.3 2.8E-11 9.4E-16 101.0 11.6 55 164-219 154-208 (397)
116 3nlc_A Uncharacterized protein 99.3 5.5E-12 1.9E-16 108.5 7.1 58 163-220 220-278 (549)
117 1s3e_A Amine oxidase [flavin-c 99.3 1.2E-11 4.1E-16 106.9 9.2 45 175-219 224-268 (520)
118 2vou_A 2,6-dihydroxypyridine h 99.3 1.4E-10 4.7E-15 96.8 14.7 54 165-220 101-154 (397)
119 3cgv_A Geranylgeranyl reductas 99.2 2.9E-11 9.9E-16 100.8 10.0 56 164-219 103-162 (397)
120 3rp8_A Flavoprotein monooxygen 99.2 1E-10 3.4E-15 98.0 13.0 55 164-220 128-182 (407)
121 2gag_B Heterotetrameric sarcos 99.2 3.6E-11 1.2E-15 100.5 9.7 55 164-219 175-230 (405)
122 3i6d_A Protoporphyrinogen oxid 99.2 2E-11 6.7E-16 104.1 8.1 40 178-217 248-287 (470)
123 3nix_A Flavoprotein/dehydrogen 99.2 2.4E-11 8.2E-16 102.1 8.5 56 164-219 107-166 (421)
124 3alj_A 2-methyl-3-hydroxypyrid 99.2 1.9E-10 6.4E-15 95.4 13.8 54 164-220 108-161 (379)
125 3nks_A Protoporphyrinogen oxid 99.2 9.5E-11 3.2E-15 100.1 12.0 55 163-218 234-289 (477)
126 2uzz_A N-methyl-L-tryptophan o 99.2 1.8E-10 6.1E-15 95.2 13.2 55 164-219 150-204 (372)
127 1yvv_A Amine oxidase, flavin-c 99.2 1.3E-10 4.4E-15 94.7 11.7 50 168-218 111-161 (336)
128 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 3.3E-11 1.1E-15 98.5 6.9 42 176-217 122-163 (342)
129 3i3l_A Alkylhalidase CMLS; fla 99.2 1.1E-10 3.6E-15 101.9 10.2 56 164-219 129-188 (591)
130 3oz2_A Digeranylgeranylglycero 99.2 4.7E-11 1.6E-15 99.3 7.7 56 164-219 103-162 (397)
131 3ihg_A RDME; flavoenzyme, anth 99.2 2.1E-10 7.2E-15 99.4 12.0 56 164-219 121-183 (535)
132 3axb_A Putative oxidoreductase 99.1 7.5E-11 2.6E-15 100.0 8.0 61 164-226 182-260 (448)
133 3atr_A Conserved archaeal prot 99.1 1E-10 3.4E-15 99.3 8.5 57 164-220 101-163 (453)
134 3fmw_A Oxygenase; mithramycin, 99.1 1.6E-10 5.4E-15 100.6 9.3 57 163-219 148-207 (570)
135 3da1_A Glycerol-3-phosphate de 99.1 1.6E-10 5.3E-15 100.5 9.1 57 163-219 170-232 (561)
136 2yg5_A Putrescine oxidase; oxi 99.1 2.6E-10 9E-15 96.7 9.8 40 13-52 5-45 (453)
137 2qa2_A CABE, polyketide oxygen 99.1 3.9E-10 1.3E-14 96.7 10.8 56 164-219 108-166 (499)
138 3p1w_A Rabgdi protein; GDI RAB 99.1 1.7E-09 5.8E-14 91.3 14.1 56 163-218 256-313 (475)
139 1k0i_A P-hydroxybenzoate hydro 99.1 1.1E-09 3.6E-14 91.3 12.7 57 164-220 104-164 (394)
140 1pj5_A N,N-dimethylglycine oxi 99.1 9.9E-11 3.4E-15 106.5 6.0 56 163-219 151-207 (830)
141 3e1t_A Halogenase; flavoprotei 99.1 5.2E-10 1.8E-14 96.4 10.2 56 164-219 112-172 (512)
142 2qa1_A PGAE, polyketide oxygen 99.1 2.9E-10 9.9E-15 97.5 8.5 56 164-219 107-165 (500)
143 3c4n_A Uncharacterized protein 99.1 6.8E-10 2.3E-14 92.8 10.5 56 163-219 172-236 (405)
144 1y0p_A Fumarate reductase flav 99.1 8.3E-10 2.8E-14 96.4 11.3 57 163-219 255-317 (571)
145 2xdo_A TETX2 protein; tetracyc 99.1 1.5E-09 5.1E-14 90.6 12.0 54 165-220 130-183 (398)
146 1qo8_A Flavocytochrome C3 fuma 99.1 4.6E-10 1.6E-14 97.8 9.1 57 163-219 250-312 (566)
147 4at0_A 3-ketosteroid-delta4-5a 99.1 1E-09 3.5E-14 94.5 11.0 56 164-219 203-264 (510)
148 3kkj_A Amine oxidase, flavin-c 99.0 1.2E-10 4.1E-15 92.2 4.8 40 12-51 1-41 (336)
149 2bry_A NEDD9 interacting prote 99.0 1.1E-09 3.9E-14 93.8 10.5 58 164-221 167-232 (497)
150 2qcu_A Aerobic glycerol-3-phos 99.0 2.6E-09 8.9E-14 91.7 12.0 57 163-219 149-210 (501)
151 3ces_A MNMG, tRNA uridine 5-ca 99.0 7.3E-10 2.5E-14 96.4 7.8 138 12-152 27-220 (651)
152 2vvm_A Monoamine oxidase N; FA 99.0 2.6E-10 8.7E-15 97.9 5.0 56 163-218 255-311 (495)
153 3c96_A Flavin-containing monoo 99.0 2.6E-09 9E-14 89.4 9.6 56 164-220 108-170 (410)
154 2aqj_A Tryptophan halogenase, 98.9 2.8E-09 9.5E-14 92.4 9.6 57 163-220 165-223 (538)
155 2e4g_A Tryptophan halogenase; 98.9 3.1E-09 1.1E-13 92.3 9.3 55 164-219 195-252 (550)
156 4hb9_A Similarities with proba 98.9 8.1E-09 2.8E-13 86.3 11.2 44 176-219 122-166 (412)
157 1d4d_A Flavocytochrome C fumar 98.9 1.2E-08 4.1E-13 89.0 12.3 57 163-219 255-317 (572)
158 2gmh_A Electron transfer flavo 98.9 7.7E-09 2.6E-13 90.3 10.9 57 164-220 145-218 (584)
159 3cp8_A TRNA uridine 5-carboxym 98.9 9.2E-09 3.2E-13 89.5 11.1 56 164-220 118-175 (641)
160 3lov_A Protoporphyrinogen oxid 98.9 2.5E-09 8.6E-14 91.3 7.5 40 178-218 249-288 (475)
161 1chu_A Protein (L-aspartate ox 98.9 3.6E-09 1.2E-13 91.5 8.2 37 12-48 7-43 (540)
162 2r0c_A REBC; flavin adenine di 98.9 1.6E-08 5.4E-13 87.8 11.6 53 164-219 139-196 (549)
163 2wdq_A Succinate dehydrogenase 98.9 1.5E-08 5E-13 88.6 11.0 56 163-218 143-205 (588)
164 2zxi_A TRNA uridine 5-carboxym 98.8 2.7E-09 9.3E-14 92.5 5.7 34 12-45 26-60 (637)
165 1kf6_A Fumarate reductase flav 98.8 8.4E-09 2.9E-13 90.3 8.8 54 164-217 135-195 (602)
166 2weu_A Tryptophan 5-halogenase 98.8 1E-08 3.6E-13 88.3 8.7 55 164-219 174-230 (511)
167 2bs2_A Quinol-fumarate reducta 98.8 4.7E-09 1.6E-13 92.6 5.6 55 164-218 159-219 (660)
168 4gut_A Lysine-specific histone 98.8 3.5E-08 1.2E-12 88.5 11.0 49 168-217 535-583 (776)
169 2pyx_A Tryptophan halogenase; 98.8 5.4E-09 1.8E-13 90.3 5.2 55 164-219 176-233 (526)
170 2h88_A Succinate dehydrogenase 98.8 1.9E-08 6.6E-13 88.1 8.2 56 164-219 156-217 (621)
171 2dkh_A 3-hydroxybenzoate hydro 98.7 1E-07 3.4E-12 84.3 12.2 56 164-219 142-211 (639)
172 3fpz_A Thiazole biosynthetic e 98.7 6.1E-09 2.1E-13 84.4 4.1 38 13-50 65-105 (326)
173 2gjc_A Thiazole biosynthetic e 98.7 4.6E-08 1.6E-12 78.4 8.8 36 13-48 65-103 (326)
174 2bcg_G Secretory pathway GDP d 98.6 2.8E-08 9.7E-13 84.2 5.3 56 163-219 242-300 (453)
175 2e1m_A L-glutamate oxidase; L- 98.6 4.3E-08 1.5E-12 80.5 5.1 44 11-54 42-87 (376)
176 2b9w_A Putative aminooxidase; 98.6 4.9E-08 1.7E-12 82.0 5.3 41 12-52 5-47 (424)
177 1v0j_A UDP-galactopyranose mut 98.6 5.8E-08 2E-12 80.9 5.5 42 12-53 6-49 (399)
178 1sez_A Protoporphyrinogen oxid 98.6 4.9E-08 1.7E-12 83.9 5.2 40 12-51 12-52 (504)
179 3hdq_A UDP-galactopyranose mut 98.6 6.1E-08 2.1E-12 80.2 5.3 44 11-54 27-71 (397)
180 1c0p_A D-amino acid oxidase; a 98.5 6.1E-08 2.1E-12 79.7 4.8 38 10-47 3-41 (363)
181 1rsg_A FMS1 protein; FAD bindi 98.5 4.2E-08 1.4E-12 84.6 3.7 39 13-51 8-48 (516)
182 2jae_A L-amino acid oxidase; o 98.5 8.6E-08 2.9E-12 82.1 5.2 52 164-217 240-294 (489)
183 2ivd_A PPO, PPOX, protoporphyr 98.5 8E-08 2.7E-12 82.0 4.9 52 164-218 239-293 (478)
184 3ihm_A Styrene monooxygenase A 98.5 6.1E-08 2.1E-12 81.6 3.6 35 11-45 20-55 (430)
185 4dsg_A UDP-galactopyranose mut 98.5 1.1E-07 3.7E-12 81.2 4.8 44 10-53 6-51 (484)
186 1i8t_A UDP-galactopyranose mut 98.4 1.7E-07 5.7E-12 77.2 5.1 39 14-52 2-41 (367)
187 2bi7_A UDP-galactopyranose mut 98.4 2.8E-07 9.5E-12 76.4 4.9 40 14-53 4-44 (384)
188 1d5t_A Guanine nucleotide diss 98.4 3.4E-07 1.2E-11 77.1 5.1 57 163-219 234-290 (433)
189 3jsk_A Cypbp37 protein; octame 98.4 2.8E-07 9.5E-12 74.3 4.3 36 13-48 79-117 (344)
190 2iid_A L-amino-acid oxidase; f 98.3 4E-07 1.4E-11 78.1 5.1 40 12-51 32-72 (498)
191 3g3e_A D-amino-acid oxidase; F 98.3 4E-07 1.4E-11 74.5 4.1 45 163-219 142-186 (351)
192 2rgh_A Alpha-glycerophosphate 98.3 4E-07 1.4E-11 79.3 4.0 57 163-219 188-250 (571)
193 3c4a_A Probable tryptophan hyd 98.2 7.3E-07 2.5E-11 73.8 4.4 34 14-47 1-37 (381)
194 3g5s_A Methylenetetrahydrofola 98.2 1.4E-06 4.9E-11 71.1 4.7 34 13-46 1-35 (443)
195 2xve_A Flavin-containing monoo 98.2 6.8E-06 2.3E-10 69.8 9.1 83 13-117 197-280 (464)
196 1b37_A Protein (polyamine oxid 98.2 1.3E-06 4.4E-11 74.4 4.6 54 164-217 207-268 (472)
197 2z3y_A Lysine-specific histone 98.1 1.9E-06 6.3E-11 76.5 5.1 41 11-51 105-146 (662)
198 3pl8_A Pyranose 2-oxidase; sub 98.1 1.5E-06 5E-11 76.4 4.3 59 175-233 272-338 (623)
199 2xag_A Lysine-specific histone 98.1 2.1E-06 7.3E-11 77.7 5.3 40 12-51 277-317 (852)
200 4eqs_A Coenzyme A disulfide re 98.1 4.1E-06 1.4E-10 70.6 6.0 93 13-116 147-243 (437)
201 2gv8_A Monooxygenase; FMO, FAD 98.1 2.7E-05 9.3E-10 65.8 10.6 80 13-117 212-296 (447)
202 4a9w_A Monooxygenase; baeyer-v 98.1 2.3E-05 7.7E-10 63.9 9.8 91 125-218 8-131 (357)
203 2gqw_A Ferredoxin reductase; f 98.0 6.3E-06 2.2E-10 68.8 6.4 94 13-116 145-242 (408)
204 1pn0_A Phenol 2-monooxygenase; 98.0 1.6E-06 5.5E-11 76.9 2.9 34 13-46 8-47 (665)
205 2yqu_A 2-oxoglutarate dehydrog 98.0 3.9E-06 1.3E-10 71.1 5.0 93 13-116 167-267 (455)
206 3f8d_A Thioredoxin reductase ( 98.0 1.7E-05 5.7E-10 63.7 8.2 97 123-222 18-128 (323)
207 1ges_A Glutathione reductase; 98.0 2.7E-06 9.3E-11 72.0 3.2 94 13-117 167-269 (450)
208 3klj_A NAD(FAD)-dependent dehy 98.0 4.3E-05 1.5E-09 63.2 10.1 95 123-222 12-119 (385)
209 1jnr_A Adenylylsulfate reducta 98.0 5.1E-06 1.7E-10 73.4 4.8 34 13-46 22-60 (643)
210 3gyx_A Adenylylsulfate reducta 98.0 5.1E-06 1.7E-10 73.4 4.5 34 13-46 22-62 (662)
211 4b1b_A TRXR, thioredoxin reduc 98.0 6.3E-06 2.1E-10 71.1 4.7 97 12-118 222-324 (542)
212 3t37_A Probable dehydrogenase; 97.9 5.6E-06 1.9E-10 71.5 4.4 36 12-47 16-53 (526)
213 1xhc_A NADH oxidase /nitrite r 97.9 3.4E-06 1.2E-10 69.4 2.9 90 14-116 144-237 (367)
214 2v3a_A Rubredoxin reductase; a 97.9 1E-05 3.4E-10 67.0 5.6 94 13-116 145-246 (384)
215 2r9z_A Glutathione amide reduc 97.9 5.4E-06 1.9E-10 70.4 3.8 95 13-116 166-267 (463)
216 2zbw_A Thioredoxin reductase; 97.9 9E-05 3.1E-09 59.9 11.0 92 125-218 10-120 (335)
217 1kdg_A CDH, cellobiose dehydro 97.9 6.7E-06 2.3E-10 71.4 4.4 37 11-47 5-42 (546)
218 1lvl_A Dihydrolipoamide dehydr 97.9 4.6E-06 1.6E-10 70.7 3.2 93 13-116 171-271 (458)
219 2eq6_A Pyruvate dehydrogenase 97.9 5.9E-06 2E-10 70.2 3.8 96 13-117 169-275 (464)
220 3ayj_A Pro-enzyme of L-phenyla 97.9 5E-06 1.7E-10 73.5 3.5 35 13-47 56-100 (721)
221 1onf_A GR, grase, glutathione 97.9 1E-05 3.5E-10 69.4 5.0 93 13-116 176-278 (500)
222 3lzw_A Ferredoxin--NADP reduct 97.9 2.3E-05 8E-10 63.2 6.8 90 125-217 12-121 (332)
223 1nhp_A NADH peroxidase; oxidor 97.9 6.9E-06 2.4E-10 69.4 3.7 97 12-117 148-250 (447)
224 3fg2_P Putative rubredoxin red 97.8 1.7E-05 5.9E-10 66.1 5.2 94 13-116 142-244 (404)
225 2hqm_A GR, grase, glutathione 97.8 1.2E-05 4.2E-10 68.5 4.2 92 13-115 185-287 (479)
226 3lxd_A FAD-dependent pyridine 97.8 2.3E-05 8E-10 65.5 5.8 94 13-116 152-254 (415)
227 3ab1_A Ferredoxin--NADP reduct 97.8 8.2E-05 2.8E-09 60.8 8.8 93 124-218 18-130 (360)
228 1ju2_A HydroxynitrIle lyase; f 97.8 1.3E-05 4.4E-10 69.3 3.8 36 12-47 25-60 (536)
229 4a5l_A Thioredoxin reductase; 97.8 1.2E-05 4.1E-10 64.5 3.2 35 13-47 152-187 (314)
230 1v59_A Dihydrolipoamide dehydr 97.8 1E-05 3.5E-10 69.0 2.8 94 13-116 183-290 (478)
231 1ebd_A E3BD, dihydrolipoamide 97.8 1.7E-05 5.8E-10 67.2 4.2 95 13-116 170-273 (455)
232 3fbs_A Oxidoreductase; structu 97.7 9.6E-05 3.3E-09 58.5 8.2 95 125-222 7-115 (297)
233 2q0l_A TRXR, thioredoxin reduc 97.7 0.00013 4.4E-09 58.3 9.0 94 125-221 6-116 (311)
234 3qvp_A Glucose oxidase; oxidor 97.7 2.1E-05 7.3E-10 68.4 4.5 34 12-45 18-53 (583)
235 3itj_A Thioredoxin reductase 1 97.7 0.00013 4.3E-09 59.0 8.7 96 124-222 26-145 (338)
236 1ojt_A Surface protein; redox- 97.7 1.3E-05 4.3E-10 68.5 2.8 93 13-116 185-289 (482)
237 1fl2_A Alkyl hydroperoxide red 97.7 0.00014 4.8E-09 58.0 8.8 94 126-221 7-117 (310)
238 2wpf_A Trypanothione reductase 97.7 1.4E-05 4.8E-10 68.4 3.0 93 13-116 191-295 (495)
239 3q9t_A Choline dehydrogenase a 97.7 2.8E-05 9.4E-10 67.6 4.7 35 12-46 5-41 (577)
240 3ic9_A Dihydrolipoamide dehydr 97.7 3.3E-05 1.1E-09 66.1 5.1 94 13-117 174-278 (492)
241 1fec_A Trypanothione reductase 97.7 1.6E-05 5.5E-10 68.0 3.0 93 13-116 187-291 (490)
242 3sx6_A Sulfide-quinone reducta 97.7 5.1E-05 1.7E-09 63.9 5.8 100 123-225 7-118 (437)
243 1zmd_A Dihydrolipoyl dehydroge 97.7 2.5E-05 8.5E-10 66.5 3.9 95 13-117 178-286 (474)
244 3ntd_A FAD-dependent pyridine 97.7 2.3E-05 7.7E-10 68.3 3.5 36 13-48 151-187 (565)
245 2bc0_A NADH oxidase; flavoprot 97.6 2.8E-05 9.6E-10 66.5 3.8 96 12-116 193-294 (490)
246 1vg0_A RAB proteins geranylger 97.6 4.7E-05 1.6E-09 66.5 5.1 58 162-219 377-437 (650)
247 2a8x_A Dihydrolipoyl dehydroge 97.6 3.8E-05 1.3E-09 65.2 4.1 94 13-117 171-275 (464)
248 2q7v_A Thioredoxin reductase; 97.6 0.00032 1.1E-08 56.4 9.1 94 125-221 13-125 (325)
249 1vdc_A NTR, NADPH dependent th 97.6 0.00024 8.2E-09 57.3 8.4 93 125-221 13-126 (333)
250 1mo9_A ORF3; nucleotide bindin 97.6 3.4E-05 1.2E-09 66.5 3.5 94 14-116 215-319 (523)
251 3d1c_A Flavin-containing putat 97.6 0.00052 1.8E-08 56.1 10.3 93 125-220 9-144 (369)
252 3o0h_A Glutathione reductase; 97.6 4.4E-05 1.5E-09 65.2 3.9 94 13-117 191-292 (484)
253 2qae_A Lipoamide, dihydrolipoy 97.6 4.9E-05 1.7E-09 64.6 4.0 94 13-117 174-280 (468)
254 4gcm_A TRXR, thioredoxin reduc 97.6 4.7E-05 1.6E-09 61.0 3.7 36 13-48 145-181 (312)
255 3fim_B ARYL-alcohol oxidase; A 97.6 3.6E-05 1.2E-09 66.8 3.2 35 13-47 2-38 (566)
256 2cdu_A NADPH oxidase; flavoenz 97.5 3.8E-05 1.3E-09 65.0 3.2 93 13-116 149-250 (452)
257 1coy_A Cholesterol oxidase; ox 97.5 6.3E-05 2.1E-09 64.6 4.6 36 12-47 10-46 (507)
258 3oc4_A Oxidoreductase, pyridin 97.5 0.00018 6.3E-09 60.8 7.4 99 124-222 6-118 (452)
259 4ap3_A Steroid monooxygenase; 97.5 0.00025 8.4E-09 61.5 7.9 95 124-220 25-162 (549)
260 3urh_A Dihydrolipoyl dehydroge 97.5 9E-05 3.1E-09 63.4 5.1 94 13-117 198-304 (491)
261 1n4w_A CHOD, cholesterol oxida 97.5 6.3E-05 2.1E-09 64.5 4.1 36 13-48 5-41 (504)
262 1dxl_A Dihydrolipoamide dehydr 97.5 4.1E-05 1.4E-09 65.1 2.8 36 13-48 177-213 (470)
263 4dna_A Probable glutathione re 97.5 5.2E-05 1.8E-09 64.4 3.3 92 13-116 170-271 (463)
264 1q1r_A Putidaredoxin reductase 97.5 0.00037 1.3E-08 58.5 8.5 98 125-224 9-119 (431)
265 1xdi_A RV3303C-LPDA; reductase 97.5 7E-05 2.4E-09 64.2 4.1 95 13-116 182-282 (499)
266 3l8k_A Dihydrolipoyl dehydroge 97.5 9.1E-05 3.1E-09 62.9 4.6 36 13-48 172-208 (466)
267 3dk9_A Grase, GR, glutathione 97.5 6.6E-05 2.3E-09 64.0 3.7 36 13-48 187-223 (478)
268 2jbv_A Choline oxidase; alcoho 97.5 0.00011 3.6E-09 63.8 5.0 36 12-47 12-49 (546)
269 1gpe_A Protein (glucose oxidas 97.5 0.00011 3.8E-09 64.2 5.1 36 12-47 23-60 (587)
270 3gwf_A Cyclohexanone monooxyge 97.5 0.00074 2.5E-08 58.4 10.1 92 125-217 13-145 (540)
271 3ef6_A Toluene 1,2-dioxygenase 97.4 0.00071 2.4E-08 56.4 9.6 96 124-222 6-114 (410)
272 1hyu_A AHPF, alkyl hydroperoxi 97.4 0.00054 1.9E-08 59.0 9.0 94 125-220 217-327 (521)
273 3lad_A Dihydrolipoamide dehydr 97.4 9.2E-05 3.1E-09 63.0 4.0 93 13-116 180-283 (476)
274 3hyw_A Sulfide-quinone reducta 97.4 8.7E-05 3E-09 62.3 3.7 91 124-219 6-109 (430)
275 4fk1_A Putative thioredoxin re 97.4 0.0008 2.7E-08 53.6 9.1 94 127-222 13-120 (304)
276 3kd9_A Coenzyme A disulfide re 97.4 0.00059 2E-08 57.6 8.5 97 124-222 7-117 (449)
277 1trb_A Thioredoxin reductase; 97.4 0.00056 1.9E-08 54.7 8.0 93 125-221 10-118 (320)
278 1m6i_A Programmed cell death p 97.4 0.00018 6.3E-09 61.5 5.2 97 13-117 180-286 (493)
279 1zk7_A HGII, reductase, mercur 97.4 0.00013 4.4E-09 62.0 4.1 93 13-116 176-274 (467)
280 3h8l_A NADH oxidase; membrane 97.3 0.00023 7.9E-09 59.3 5.5 98 124-224 5-118 (409)
281 3cty_A Thioredoxin reductase; 97.3 0.00081 2.8E-08 53.9 8.2 93 125-221 21-128 (319)
282 3r9u_A Thioredoxin reductase; 97.3 0.00081 2.8E-08 53.6 8.1 92 125-222 9-121 (315)
283 3uox_A Otemo; baeyer-villiger 97.3 0.00052 1.8E-08 59.4 7.0 92 124-217 13-145 (545)
284 2a87_A TRXR, TR, thioredoxin r 97.3 0.00071 2.4E-08 54.6 7.4 95 123-221 17-128 (335)
285 3ics_A Coenzyme A-disulfide re 97.3 0.00071 2.4E-08 59.2 7.8 101 122-222 38-155 (588)
286 3h28_A Sulfide-quinone reducta 97.3 0.00017 5.7E-09 60.6 3.6 95 125-222 7-112 (430)
287 3dgh_A TRXR-1, thioredoxin red 97.2 0.00014 4.6E-09 62.1 2.8 33 13-45 187-220 (483)
288 3iwa_A FAD-dependent pyridine 97.2 0.0011 3.7E-08 56.4 8.2 99 123-221 6-127 (472)
289 3dgz_A Thioredoxin reductase 2 97.2 0.00017 5.8E-09 61.6 3.1 33 13-45 185-218 (488)
290 3vrd_B FCCB subunit, flavocyto 97.1 0.0008 2.7E-08 55.8 6.5 99 123-224 5-113 (401)
291 3qfa_A Thioredoxin reductase 1 97.1 0.00075 2.6E-08 58.1 5.9 32 13-44 210-242 (519)
292 2x8g_A Thioredoxin glutathione 97.1 0.00047 1.6E-08 60.5 4.7 32 13-44 286-318 (598)
293 3cgb_A Pyridine nucleotide-dis 97.1 0.0016 5.5E-08 55.4 7.9 100 123-222 39-155 (480)
294 3fwz_A Inner membrane protein 97.1 0.00083 2.8E-08 46.9 5.1 36 11-46 5-41 (140)
295 3ces_A MNMG, tRNA uridine 5-ca 97.0 0.003 1E-07 55.4 9.4 55 165-220 126-182 (651)
296 3s5w_A L-ornithine 5-monooxyge 96.9 0.00092 3.1E-08 56.6 5.1 54 167-220 131-193 (463)
297 3k30_A Histamine dehydrogenase 96.9 0.0012 4E-08 59.0 5.9 96 13-116 523-627 (690)
298 2vdc_G Glutamate synthase [NAD 96.8 0.0018 6.2E-08 54.7 6.1 36 12-47 263-300 (456)
299 2zxi_A TRNA uridine 5-carboxym 96.8 0.0066 2.3E-07 53.0 9.6 56 165-221 125-182 (637)
300 1w4x_A Phenylacetone monooxyge 96.8 0.0049 1.7E-07 53.3 8.8 93 124-218 20-153 (542)
301 3llv_A Exopolyphosphatase-rela 96.8 0.0011 3.8E-08 46.2 3.8 34 13-46 6-40 (141)
302 2g1u_A Hypothetical protein TM 96.7 0.0014 4.9E-08 46.5 4.2 34 13-46 19-53 (155)
303 3ic5_A Putative saccharopine d 96.6 0.0019 6.4E-08 43.3 3.7 33 13-45 5-39 (118)
304 1y56_A Hypothetical protein PH 96.6 0.0033 1.1E-07 53.7 5.9 97 122-222 110-222 (493)
305 1lss_A TRK system potassium up 96.5 0.0024 8.2E-08 44.2 4.1 32 14-45 5-37 (140)
306 1d5t_A Guanine nucleotide diss 96.4 0.0016 5.5E-08 54.7 3.0 44 12-55 5-49 (433)
307 1id1_A Putative potassium chan 96.4 0.0041 1.4E-07 43.9 4.8 32 14-45 4-36 (153)
308 3jsk_A Cypbp37 protein; octame 96.4 0.012 3.9E-07 47.6 7.7 95 126-220 85-252 (344)
309 4b63_A L-ornithine N5 monooxyg 96.3 0.013 4.5E-07 50.1 8.3 35 12-46 245-282 (501)
310 2gag_A Heterotetrameric sarcos 96.3 0.0021 7.2E-08 59.5 3.3 35 14-48 285-320 (965)
311 4g6h_A Rotenone-insensitive NA 96.2 0.0065 2.2E-07 52.0 5.8 98 122-222 44-172 (502)
312 3lk7_A UDP-N-acetylmuramoylala 96.2 0.0046 1.6E-07 52.1 4.8 34 12-45 8-42 (451)
313 1f0y_A HCDH, L-3-hydroxyacyl-C 96.2 0.0057 2E-07 48.6 4.8 35 12-46 14-49 (302)
314 2hmt_A YUAA protein; RCK, KTN, 96.1 0.0046 1.6E-07 42.9 3.8 33 13-45 6-39 (144)
315 2bcg_G Secretory pathway GDP d 96.1 0.0063 2.2E-07 51.4 5.3 42 12-53 10-52 (453)
316 3dfz_A SIRC, precorrin-2 dehyd 96.1 0.0073 2.5E-07 45.5 5.0 34 12-45 30-64 (223)
317 1pzg_A LDH, lactate dehydrogen 96.1 0.0078 2.7E-07 48.5 5.2 37 10-46 6-44 (331)
318 3c85_A Putative glutathione-re 96.1 0.0083 2.8E-07 43.8 5.0 34 13-46 39-74 (183)
319 3i83_A 2-dehydropantoate 2-red 96.0 0.0066 2.2E-07 48.7 4.4 32 14-45 3-35 (320)
320 2x5o_A UDP-N-acetylmuramoylala 96.0 0.0047 1.6E-07 51.9 3.7 34 13-46 5-39 (439)
321 3k96_A Glycerol-3-phosphate de 95.9 0.0099 3.4E-07 48.4 5.2 35 12-46 28-63 (356)
322 3pid_A UDP-glucose 6-dehydroge 95.9 0.0085 2.9E-07 49.9 4.8 34 13-46 36-69 (432)
323 4dio_A NAD(P) transhydrogenase 95.8 0.0089 3.1E-07 49.2 4.6 34 13-46 190-224 (405)
324 1o94_A Tmadh, trimethylamine d 95.8 0.0017 5.7E-08 58.3 0.4 33 13-45 528-563 (729)
325 3hn2_A 2-dehydropantoate 2-red 95.8 0.0072 2.5E-07 48.3 3.9 32 14-45 3-35 (312)
326 1kyq_A Met8P, siroheme biosynt 95.8 0.0066 2.3E-07 47.3 3.5 34 12-45 12-46 (274)
327 1b37_A Protein (polyamine oxid 95.8 0.0087 3E-07 50.7 4.5 42 12-53 3-46 (472)
328 3l4b_C TRKA K+ channel protien 95.7 0.0079 2.7E-07 45.3 3.6 32 15-46 2-34 (218)
329 3p2y_A Alanine dehydrogenase/p 95.7 0.01 3.5E-07 48.4 4.3 34 13-46 184-218 (381)
330 3qha_A Putative oxidoreductase 95.6 0.012 4.1E-07 46.6 4.6 34 13-46 15-49 (296)
331 4e12_A Diketoreductase; oxidor 95.6 0.013 4.5E-07 46.1 4.7 34 13-46 4-38 (283)
332 3doj_A AT3G25530, dehydrogenas 95.6 0.013 4.3E-07 46.8 4.5 35 12-46 20-55 (310)
333 3g17_A Similar to 2-dehydropan 95.5 0.01 3.5E-07 46.9 3.7 32 14-45 3-35 (294)
334 1cjc_A Protein (adrenodoxin re 95.5 0.009 3.1E-07 50.5 3.6 88 123-219 9-106 (460)
335 3ado_A Lambda-crystallin; L-gu 95.5 0.011 3.8E-07 47.2 3.8 33 14-46 7-40 (319)
336 4g65_A TRK system potassium up 95.5 0.0079 2.7E-07 50.8 3.1 33 14-46 4-37 (461)
337 2ewd_A Lactate dehydrogenase,; 95.5 0.018 6E-07 46.1 5.0 34 13-46 4-39 (317)
338 4ezb_A Uncharacterized conserv 95.4 0.0077 2.6E-07 48.2 2.8 35 11-45 22-58 (317)
339 3ggo_A Prephenate dehydrogenas 95.3 0.021 7.1E-07 45.7 4.9 34 13-46 33-69 (314)
340 3ego_A Probable 2-dehydropanto 95.3 0.019 6.5E-07 45.7 4.6 32 14-45 3-34 (307)
341 3eag_A UDP-N-acetylmuramate:L- 95.2 0.02 6.9E-07 46.0 4.7 34 13-46 4-39 (326)
342 2ew2_A 2-dehydropantoate 2-red 95.2 0.017 5.8E-07 46.0 4.3 32 14-45 4-36 (316)
343 2raf_A Putative dinucleotide-b 95.2 0.021 7.3E-07 42.6 4.5 34 13-46 19-53 (209)
344 3oj0_A Glutr, glutamyl-tRNA re 95.2 0.014 4.7E-07 40.7 3.3 33 13-45 21-54 (144)
345 1lqt_A FPRA; NADP+ derivative, 95.2 0.0061 2.1E-07 51.5 1.6 86 124-218 7-107 (456)
346 4ffl_A PYLC; amino acid, biosy 95.2 0.019 6.4E-07 46.9 4.5 34 13-46 1-35 (363)
347 1t2d_A LDH-P, L-lactate dehydr 95.1 0.027 9.3E-07 45.1 5.2 34 13-46 4-39 (322)
348 3gg2_A Sugar dehydrogenase, UD 95.1 0.019 6.5E-07 48.3 4.4 32 14-45 3-35 (450)
349 1ks9_A KPA reductase;, 2-dehyd 95.1 0.021 7.3E-07 44.8 4.5 32 15-46 2-34 (291)
350 1lld_A L-lactate dehydrogenase 95.1 0.021 7.1E-07 45.7 4.4 33 13-45 7-42 (319)
351 1x13_A NAD(P) transhydrogenase 95.1 0.021 7.2E-07 47.3 4.4 34 13-46 172-206 (401)
352 3tl2_A Malate dehydrogenase; c 95.0 0.029 9.8E-07 44.8 4.9 32 13-44 8-41 (315)
353 2hjr_A Malate dehydrogenase; m 95.0 0.029 1E-06 45.1 5.0 33 14-46 15-49 (328)
354 1l7d_A Nicotinamide nucleotide 95.0 0.025 8.7E-07 46.5 4.8 34 13-46 172-206 (384)
355 3ghy_A Ketopantoate reductase 94.9 0.027 9.2E-07 45.4 4.7 31 14-44 4-35 (335)
356 1evy_A Glycerol-3-phosphate de 94.9 0.023 7.8E-07 46.4 4.3 31 15-45 17-48 (366)
357 2dpo_A L-gulonate 3-dehydrogen 94.9 0.026 8.8E-07 45.2 4.4 34 13-46 6-40 (319)
358 1y6j_A L-lactate dehydrogenase 94.9 0.031 1E-06 44.7 4.8 34 12-45 6-42 (318)
359 2y0c_A BCEC, UDP-glucose dehyd 94.8 0.025 8.7E-07 47.9 4.4 33 13-45 8-41 (478)
360 1ur5_A Malate dehydrogenase; o 94.8 0.033 1.1E-06 44.3 4.9 32 14-45 3-36 (309)
361 3qsg_A NAD-binding phosphogluc 94.8 0.026 8.9E-07 45.0 4.2 33 13-45 24-58 (312)
362 2uyy_A N-PAC protein; long-cha 94.8 0.035 1.2E-06 44.3 4.9 34 13-46 30-64 (316)
363 3abi_A Putative uncharacterize 94.7 0.03 1E-06 45.7 4.5 37 9-45 12-48 (365)
364 3pqe_A L-LDH, L-lactate dehydr 94.7 0.037 1.3E-06 44.4 4.8 34 12-45 4-40 (326)
365 1bg6_A N-(1-D-carboxylethyl)-L 94.7 0.031 1.1E-06 45.4 4.4 32 14-45 5-37 (359)
366 2a9f_A Putative malic enzyme ( 94.6 0.032 1.1E-06 45.5 4.3 33 13-45 188-222 (398)
367 3k6j_A Protein F01G10.3, confi 94.6 0.044 1.5E-06 46.1 5.2 34 13-46 54-88 (460)
368 3c24_A Putative oxidoreductase 94.6 0.041 1.4E-06 43.2 4.9 34 12-45 10-45 (286)
369 2qyt_A 2-dehydropantoate 2-red 94.6 0.025 8.4E-07 45.1 3.6 32 12-43 7-45 (317)
370 3pdu_A 3-hydroxyisobutyrate de 94.6 0.029 9.9E-07 44.1 3.9 33 14-46 2-35 (287)
371 1guz_A Malate dehydrogenase; o 94.6 0.036 1.2E-06 44.2 4.4 32 15-46 2-36 (310)
372 2ivd_A PPO, PPOX, protoporphyr 94.5 0.038 1.3E-06 46.8 4.8 41 11-51 14-55 (478)
373 1ps9_A 2,4-dienoyl-COA reducta 94.5 0.053 1.8E-06 48.1 5.9 84 122-222 375-470 (671)
374 3g0o_A 3-hydroxyisobutyrate de 94.5 0.037 1.3E-06 43.9 4.4 34 13-46 7-41 (303)
375 1gte_A Dihydropyrimidine dehyd 94.5 0.015 5.1E-07 54.3 2.4 92 120-220 187-289 (1025)
376 1zej_A HBD-9, 3-hydroxyacyl-CO 94.5 0.044 1.5E-06 43.2 4.6 35 12-46 11-45 (293)
377 1vl6_A Malate oxidoreductase; 94.4 0.038 1.3E-06 45.0 4.3 33 12-44 191-225 (388)
378 1vg0_A RAB proteins geranylger 94.4 0.09 3.1E-06 46.2 6.9 42 12-53 7-49 (650)
379 2v6b_A L-LDH, L-lactate dehydr 94.4 0.042 1.4E-06 43.7 4.5 31 15-45 2-35 (304)
380 1dlj_A UDP-glucose dehydrogena 94.4 0.04 1.4E-06 45.6 4.5 31 15-45 2-32 (402)
381 1pjc_A Protein (L-alanine dehy 94.4 0.035 1.2E-06 45.3 4.1 33 13-45 167-200 (361)
382 4a7p_A UDP-glucose dehydrogena 94.4 0.043 1.5E-06 46.0 4.6 34 13-46 8-42 (446)
383 3g79_A NDP-N-acetyl-D-galactos 94.4 0.046 1.6E-06 46.2 4.8 34 13-46 18-54 (478)
384 1jw9_B Molybdopterin biosynthe 94.4 0.043 1.5E-06 42.2 4.3 33 13-45 31-65 (249)
385 3vtf_A UDP-glucose 6-dehydroge 94.3 0.046 1.6E-06 45.7 4.7 34 12-45 20-54 (444)
386 2vns_A Metalloreductase steap3 94.3 0.044 1.5E-06 41.1 4.2 33 13-45 28-61 (215)
387 3ius_A Uncharacterized conserv 94.3 0.046 1.6E-06 42.7 4.5 34 13-46 5-39 (286)
388 3pef_A 6-phosphogluconate dehy 94.2 0.042 1.4E-06 43.2 4.2 33 14-46 2-35 (287)
389 1zcj_A Peroxisomal bifunctiona 94.2 0.057 1.9E-06 45.6 5.2 34 13-46 37-71 (463)
390 3l9w_A Glutathione-regulated p 94.2 0.045 1.5E-06 45.5 4.4 34 13-46 4-38 (413)
391 2b9w_A Putative aminooxidase; 94.2 0.069 2.3E-06 44.4 5.7 53 165-218 205-257 (424)
392 1z82_A Glycerol-3-phosphate de 94.1 0.048 1.6E-06 43.9 4.4 34 12-45 13-47 (335)
393 4huj_A Uncharacterized protein 94.1 0.029 9.8E-07 42.3 2.9 34 13-46 23-58 (220)
394 2rgh_A Alpha-glycerophosphate 94.1 0.061 2.1E-06 46.8 5.2 41 12-52 31-72 (571)
395 2eez_A Alanine dehydrogenase; 94.1 0.05 1.7E-06 44.5 4.4 33 13-45 166-199 (369)
396 3dtt_A NADP oxidoreductase; st 94.0 0.053 1.8E-06 41.6 4.2 34 13-46 19-53 (245)
397 2vhw_A Alanine dehydrogenase; 94.0 0.052 1.8E-06 44.6 4.4 33 13-45 168-201 (377)
398 2h78_A Hibadh, 3-hydroxyisobut 94.0 0.045 1.5E-06 43.3 3.9 34 13-46 3-37 (302)
399 3gvi_A Malate dehydrogenase; N 94.0 0.071 2.4E-06 42.7 5.0 34 13-46 7-42 (324)
400 2aef_A Calcium-gated potassium 94.0 0.034 1.1E-06 42.3 3.0 34 12-46 8-42 (234)
401 3phh_A Shikimate dehydrogenase 94.0 0.065 2.2E-06 41.6 4.6 34 13-46 118-152 (269)
402 2pv7_A T-protein [includes: ch 94.0 0.075 2.6E-06 42.0 5.1 34 13-46 21-56 (298)
403 2i6t_A Ubiquitin-conjugating e 93.9 0.06 2.1E-06 42.7 4.5 34 13-46 14-50 (303)
404 1mv8_A GMD, GDP-mannose 6-dehy 93.9 0.045 1.5E-06 45.9 3.8 31 15-45 2-33 (436)
405 1pjq_A CYSG, siroheme synthase 93.8 0.045 1.5E-06 46.2 3.8 33 13-45 12-45 (457)
406 3hwr_A 2-dehydropantoate 2-red 93.8 0.059 2E-06 43.1 4.2 32 13-45 19-51 (318)
407 3l6d_A Putative oxidoreductase 93.7 0.082 2.8E-06 42.0 5.0 34 13-46 9-43 (306)
408 1yj8_A Glycerol-3-phosphate de 93.7 0.055 1.9E-06 44.3 4.1 34 13-46 21-62 (375)
409 3mog_A Probable 3-hydroxybutyr 93.7 0.068 2.3E-06 45.4 4.7 34 13-46 5-39 (483)
410 3e8x_A Putative NAD-dependent 93.7 0.065 2.2E-06 40.6 4.3 35 12-46 20-56 (236)
411 1hyh_A L-hicdh, L-2-hydroxyiso 93.7 0.063 2.2E-06 42.7 4.3 32 14-45 2-36 (309)
412 1txg_A Glycerol-3-phosphate de 93.7 0.061 2.1E-06 43.2 4.3 29 15-43 2-31 (335)
413 4e21_A 6-phosphogluconate dehy 93.7 0.066 2.3E-06 43.5 4.4 34 13-46 22-56 (358)
414 3ldh_A Lactate dehydrogenase; 93.7 0.11 3.7E-06 41.7 5.5 34 13-46 21-57 (330)
415 1nyt_A Shikimate 5-dehydrogena 93.6 0.074 2.5E-06 41.4 4.5 33 13-45 119-152 (271)
416 4dll_A 2-hydroxy-3-oxopropiona 93.6 0.064 2.2E-06 42.9 4.2 34 13-46 31-65 (320)
417 3dhn_A NAD-dependent epimerase 93.6 0.064 2.2E-06 40.3 4.0 34 13-46 4-39 (227)
418 3cky_A 2-hydroxymethyl glutara 93.6 0.061 2.1E-06 42.5 4.0 33 13-45 4-37 (301)
419 2jae_A L-amino acid oxidase; o 93.5 0.073 2.5E-06 45.2 4.7 41 11-51 9-50 (489)
420 2q3e_A UDP-glucose 6-dehydroge 93.5 0.068 2.3E-06 45.2 4.4 32 14-45 6-40 (467)
421 4e4t_A Phosphoribosylaminoimid 93.4 0.1 3.5E-06 43.5 5.3 35 12-46 34-69 (419)
422 3gpi_A NAD-dependent epimerase 93.4 0.11 3.6E-06 40.7 5.1 33 14-46 4-37 (286)
423 3p7m_A Malate dehydrogenase; p 93.4 0.1 3.5E-06 41.7 5.0 33 14-46 6-40 (321)
424 3q2o_A Phosphoribosylaminoimid 93.4 0.1 3.5E-06 43.0 5.1 35 12-46 13-48 (389)
425 2o3j_A UDP-glucose 6-dehydroge 93.4 0.084 2.9E-06 44.8 4.7 33 13-45 9-44 (481)
426 2egg_A AROE, shikimate 5-dehyd 93.4 0.096 3.3E-06 41.4 4.7 33 13-45 141-175 (297)
427 3d4o_A Dipicolinate synthase s 93.3 0.081 2.8E-06 41.7 4.3 34 12-45 154-188 (293)
428 2rir_A Dipicolinate synthase, 93.3 0.081 2.8E-06 41.9 4.3 34 12-45 156-190 (300)
429 3gvp_A Adenosylhomocysteinase 93.3 0.066 2.3E-06 44.3 3.8 34 12-45 219-253 (435)
430 1jay_A Coenzyme F420H2:NADP+ o 93.3 0.089 3E-06 39.1 4.3 31 15-45 2-34 (212)
431 1vpd_A Tartronate semialdehyde 93.3 0.068 2.3E-06 42.2 3.8 33 14-46 6-39 (299)
432 3gt0_A Pyrroline-5-carboxylate 93.3 0.1 3.4E-06 40.0 4.7 33 14-46 3-40 (247)
433 1a5z_A L-lactate dehydrogenase 93.3 0.08 2.7E-06 42.3 4.2 31 15-45 2-35 (319)
434 2cvz_A Dehydrogenase, 3-hydrox 93.3 0.083 2.8E-06 41.4 4.3 33 14-46 2-34 (289)
435 2g5c_A Prephenate dehydrogenas 93.3 0.089 3E-06 41.1 4.4 32 14-45 2-36 (281)
436 1rsg_A FMS1 protein; FAD bindi 93.3 0.061 2.1E-06 46.1 3.7 52 166-217 201-255 (516)
437 3c7a_A Octopine dehydrogenase; 93.2 0.066 2.3E-06 44.3 3.7 29 14-42 3-33 (404)
438 4g65_A TRK system potassium up 93.2 0.084 2.9E-06 44.5 4.4 34 13-46 235-268 (461)
439 3ond_A Adenosylhomocysteinase; 93.1 0.094 3.2E-06 44.2 4.5 34 12-45 264-298 (488)
440 3dfu_A Uncharacterized protein 92.9 0.031 1.1E-06 42.3 1.2 32 13-44 6-38 (232)
441 1ldn_A L-lactate dehydrogenase 92.9 0.13 4.4E-06 41.1 4.9 33 13-45 6-41 (316)
442 1oju_A MDH, malate dehydrogena 92.9 0.1 3.5E-06 41.1 4.2 32 15-46 2-36 (294)
443 2f1k_A Prephenate dehydrogenas 92.8 0.11 3.6E-06 40.6 4.3 32 15-46 2-34 (279)
444 2ahr_A Putative pyrroline carb 92.8 0.13 4.4E-06 39.7 4.7 33 14-46 4-37 (259)
445 1yqg_A Pyrroline-5-carboxylate 92.8 0.11 3.7E-06 40.1 4.2 31 15-45 2-34 (263)
446 2wtb_A MFP2, fatty acid multif 92.7 0.14 4.9E-06 45.8 5.3 34 13-46 312-346 (725)
447 2izz_A Pyrroline-5-carboxylate 92.6 0.12 4E-06 41.4 4.4 33 14-46 23-60 (322)
448 3ce6_A Adenosylhomocysteinase; 92.6 0.11 3.9E-06 44.0 4.4 34 12-45 273-307 (494)
449 3d0o_A L-LDH 1, L-lactate dehy 92.6 0.14 4.7E-06 40.9 4.7 33 13-45 6-41 (317)
450 2rcy_A Pyrroline carboxylate r 92.6 0.13 4.5E-06 39.6 4.5 33 14-46 5-42 (262)
451 3nep_X Malate dehydrogenase; h 92.6 0.12 4.1E-06 41.1 4.3 33 14-46 1-36 (314)
452 3don_A Shikimate dehydrogenase 92.6 0.11 3.7E-06 40.6 3.9 34 13-46 117-152 (277)
453 3vku_A L-LDH, L-lactate dehydr 92.6 0.14 4.9E-06 40.9 4.7 34 12-45 8-44 (326)
454 2gf2_A Hibadh, 3-hydroxyisobut 92.5 0.11 3.8E-06 40.9 4.1 32 15-46 2-34 (296)
455 1p77_A Shikimate 5-dehydrogena 92.5 0.083 2.8E-06 41.2 3.2 33 13-45 119-152 (272)
456 3orq_A N5-carboxyaminoimidazol 92.5 0.18 6E-06 41.4 5.3 35 12-46 11-46 (377)
457 2hk9_A Shikimate dehydrogenase 92.4 0.13 4.4E-06 40.1 4.2 33 13-45 129-162 (275)
458 4aj2_A L-lactate dehydrogenase 92.4 0.17 5.9E-06 40.6 5.0 34 12-45 18-54 (331)
459 4id9_A Short-chain dehydrogena 92.4 0.14 4.8E-06 41.2 4.6 35 12-46 18-54 (347)
460 1x0v_A GPD-C, GPDH-C, glycerol 92.4 0.079 2.7E-06 42.9 3.1 33 14-46 9-49 (354)
461 1leh_A Leucine dehydrogenase; 92.4 0.14 4.9E-06 41.6 4.5 34 12-45 172-206 (364)
462 1gpj_A Glutamyl-tRNA reductase 92.4 0.14 4.7E-06 42.4 4.5 34 12-45 166-201 (404)
463 3ew7_A LMO0794 protein; Q8Y8U8 92.3 0.16 5.3E-06 37.8 4.5 31 15-45 2-34 (221)
464 3fi9_A Malate dehydrogenase; s 92.2 0.18 6.2E-06 40.7 4.9 33 13-45 8-44 (343)
465 1edz_A 5,10-methylenetetrahydr 92.2 0.15 5.1E-06 40.6 4.3 34 12-45 176-211 (320)
466 4gx0_A TRKA domain protein; me 92.2 0.13 4.5E-06 44.6 4.4 34 14-47 349-383 (565)
467 2iid_A L-amino-acid oxidase; f 92.2 0.21 7.2E-06 42.4 5.6 51 164-217 242-296 (498)
468 1ez4_A Lactate dehydrogenase; 92.2 0.16 5.4E-06 40.6 4.5 34 12-45 4-40 (318)
469 2e5v_A L-aspartate oxidase; ar 92.2 0.18 6.1E-06 42.7 5.1 56 164-220 120-177 (472)
470 3h9u_A Adenosylhomocysteinase; 92.1 0.12 4.1E-06 42.9 3.8 34 12-45 210-244 (436)
471 2p4q_A 6-phosphogluconate dehy 92.1 0.16 5.5E-06 43.3 4.8 35 12-46 9-44 (497)
472 1kjq_A GART 2, phosphoribosylg 92.1 0.21 7.2E-06 41.0 5.4 38 9-46 7-45 (391)
473 2x4g_A Nucleoside-diphosphate- 92.1 0.19 6.4E-06 40.3 5.0 33 14-46 14-48 (342)
474 4hv4_A UDP-N-acetylmuramate--L 92.1 0.11 3.8E-06 44.2 3.7 35 11-45 20-56 (494)
475 3tnl_A Shikimate dehydrogenase 92.0 0.16 5.5E-06 40.4 4.4 34 12-45 153-188 (315)
476 1np3_A Ketol-acid reductoisome 92.0 0.19 6.4E-06 40.5 4.8 34 13-46 16-50 (338)
477 3ktd_A Prephenate dehydrogenas 92.0 0.19 6.6E-06 40.5 4.8 34 13-46 8-42 (341)
478 3pl8_A Pyranose 2-oxidase; sub 92.0 0.1 3.5E-06 45.9 3.5 38 12-49 45-83 (623)
479 3tri_A Pyrroline-5-carboxylate 92.0 0.2 6.7E-06 39.2 4.8 33 14-46 4-40 (280)
480 3jyo_A Quinate/shikimate dehyd 92.0 0.18 6.2E-06 39.5 4.5 34 12-45 126-161 (283)
481 4b4o_A Epimerase family protei 92.0 0.17 5.7E-06 39.8 4.5 33 14-46 1-35 (298)
482 4gbj_A 6-phosphogluconate dehy 91.9 0.11 3.9E-06 41.0 3.4 34 13-46 5-39 (297)
483 1yb4_A Tartronic semialdehyde 91.8 0.097 3.3E-06 41.2 2.9 31 14-45 4-35 (295)
484 3vps_A TUNA, NAD-dependent epi 91.8 0.23 7.8E-06 39.3 5.1 34 13-46 7-42 (321)
485 4gwg_A 6-phosphogluconate dehy 91.8 0.19 6.4E-06 42.6 4.7 34 13-46 4-38 (484)
486 3c4a_A Probable tryptophan hyd 91.7 0.26 8.9E-06 40.3 5.5 44 165-219 100-143 (381)
487 3n58_A Adenosylhomocysteinase; 91.7 0.14 4.8E-06 42.6 3.8 34 12-45 246-280 (464)
488 2dbq_A Glyoxylate reductase; D 91.6 0.21 7.2E-06 40.2 4.7 34 13-46 150-184 (334)
489 2we8_A Xanthine dehydrogenase; 91.6 0.18 6.3E-06 41.3 4.4 36 13-48 204-240 (386)
490 3fbt_A Chorismate mutase and s 91.6 0.17 5.7E-06 39.6 4.0 34 12-45 121-156 (282)
491 3pwz_A Shikimate dehydrogenase 91.6 0.21 7.3E-06 38.8 4.6 34 12-45 119-154 (272)
492 3h2s_A Putative NADH-flavin re 91.6 0.2 6.9E-06 37.3 4.4 31 15-45 2-34 (224)
493 3o8q_A Shikimate 5-dehydrogena 91.5 0.22 7.5E-06 39.0 4.6 34 12-45 125-160 (281)
494 3d1l_A Putative NADP oxidoredu 91.5 0.19 6.4E-06 38.9 4.2 33 14-46 11-45 (266)
495 1b8p_A Protein (malate dehydro 91.5 0.16 5.3E-06 40.8 3.8 32 13-44 5-45 (329)
496 2zyd_A 6-phosphogluconate dehy 91.5 0.21 7.1E-06 42.4 4.7 33 14-46 16-49 (480)
497 3ax6_A Phosphoribosylaminoimid 91.4 0.19 6.6E-06 41.1 4.4 32 14-45 2-34 (380)
498 3r6d_A NAD-dependent epimerase 91.4 0.25 8.6E-06 36.8 4.7 32 14-45 6-40 (221)
499 2zqz_A L-LDH, L-lactate dehydr 91.3 0.25 8.5E-06 39.6 4.8 34 12-45 8-44 (326)
500 1nvt_A Shikimate 5'-dehydrogen 91.3 0.23 7.9E-06 38.9 4.6 32 13-45 128-160 (287)
No 1
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.9e-35 Score=250.12 Aligned_cols=251 Identities=20% Similarity=0.199 Sum_probs=188.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceee------------------ec-------CCccccc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA------------------MV-------EPSFGKR 65 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~------------------~~-------~~~~~~~ 65 (274)
.++||+|||||++|+++|+.|++ |++|+|+|| +.+|+.|..... .. ...+...
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWA 82 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHH
Confidence 45899999999999999999985 999999999 556654321000 00 0000000
Q ss_pred eee--------e----ccccc--cccEEEEEeeEEEecCeEEe-CCCeEEecCEEEEccCCCCC-CChhH-------HHH
Q 023975 66 SVI--------N----HTDYL--VNGRIVASPAINITENEVLT-AEGRRVVYDYLVIATGHKDP-VPKTR-------TER 122 (274)
Q Consensus 66 ~~~--------~----~~~~~--~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~li~a~G~~~~-~~~~~-------~~~ 122 (274)
... . ...++ .+++++......++.+.+.+ .++..+.||++++|||..|. .|..+ ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~ 162 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNE 162 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGGCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCccccccHHH
Confidence 000 0 00011 24666666666666667777 57788999999999998877 65432 122
Q ss_pred HHH----------ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccC
Q 023975 123 LNQ----------YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS 192 (274)
Q Consensus 123 ~~~----------~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 192 (274)
+.. +++|.+++|++..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.|+++++++.|.+++.+
T Consensus 163 ~~~~~~~~~~v~ViGgG~~g~e~A~~l~--~~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 240 (463)
T 4dna_A 163 AFDLPALPESILIAGGGYIAVEFANIFH--GLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSAD 240 (463)
T ss_dssp HTTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEC
T ss_pred HhhhhcCCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEc
Confidence 222 334889999999998 56889999999999888889999999999999999999999999999876
Q ss_pred CCc-eeEE-CCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCCC
Q 023975 193 EGS-DTYL-TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSAS 267 (274)
Q Consensus 193 ~~~-~~v~-~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~~ 267 (274)
++. +.+. +++|+ +++|.||+|+|+.|+..++.....++.++++|++.||++++| +.|+||++|||++.+...+
T Consensus 241 ~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~~~ 315 (463)
T 4dna_A 241 ADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDRVQLTP 315 (463)
T ss_dssp TTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSSCCCHH
T ss_pred CCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCCCCCChH
Confidence 554 6788 88997 999999999999999887433334446788999999999998 8999999999998665543
No 2
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=3.5e-34 Score=240.53 Aligned_cols=246 Identities=23% Similarity=0.321 Sum_probs=187.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCc--EEEEcCCCCceeeccceee-ecCCccccceeeecccccc--ccEEEEE-eeE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSAD--VTLIDPKEYFEITWASLRA-MVEPSFGKRSVINHTDYLV--NGRIVAS-PAI 85 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~--v~vie~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~ 85 (274)
+++|+|||||++|+++|..|+ +|++ |+|+|+++.+++....+.. .+.............+++. ++++... .+.
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEE
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEE
Confidence 369999999999999999997 4776 9999999887654333322 1111111111122223322 5676665 555
Q ss_pred EEec--CeEEeCCCeEEecCEEEEccCCCCCCChhH---------------HHHHH----------HccCCchhhhHHHH
Q 023975 86 NITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTR---------------TERLN----------QYQAGPTGVELAGE 138 (274)
Q Consensus 86 ~~~~--~~v~~~~~~~~~~~~li~a~G~~~~~~~~~---------------~~~~~----------~~~~g~~~~e~a~~ 138 (274)
.++. +.+.+.++.++.||++++|||+.|..|+++ ...+. .+++|.+++|+|..
T Consensus 82 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~ 161 (410)
T 3ef6_A 82 ALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATT 161 (410)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHH
T ss_pred EEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHH
Confidence 5654 478888898999999999999885544211 11121 13448999999999
Q ss_pred hhhhCCCCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccC
Q 023975 139 IAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 139 l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
+. ..+.+++++.+.+.+++ ..++.+.+.+.+.+++.||++++++.|++++.++....+++.+|++++||.||+|+|.
T Consensus 162 l~--~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 162 AR--KLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp HH--HTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCE
T ss_pred HH--hCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 98 56899999999988776 4677888999999999999999999999998766556789999999999999999999
Q ss_pred CCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 218 PVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
.|+.+++...++. .+ +++.||++++| +.|+||++|||+..+..
T Consensus 240 ~p~~~l~~~~gl~--~~--~gi~vd~~~~t-~~~~IyA~GD~a~~~~~ 282 (410)
T 3ef6_A 240 EPADQLARQAGLA--CD--RGVIVDHCGAT-LAKGVFAVGDVASWPLR 282 (410)
T ss_dssp EECCHHHHHTTCC--BS--SSEECCTTSBC-SSTTEEECGGGEEEEBT
T ss_pred eecHHHHHhCCCc--cC--CeEEEccCeeE-CCCCEEEEEcceeccCC
Confidence 9999988877763 33 45999999998 89999999999987764
No 3
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=3.8e-35 Score=249.15 Aligned_cols=248 Identities=20% Similarity=0.255 Sum_probs=185.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeecccee--------------eecC---Cccccc---eeeec
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLR--------------AMVE---PSFGKR---SVINH 70 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~--------------~~~~---~~~~~~---~~~~~ 70 (274)
.++||+|||||++|+++|+.|++ |++|+|+|++ .+|+.|.... .... ..+... ....+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~ 81 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW 81 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 35899999999999999999974 9999999998 4555432110 0000 000000 00000
Q ss_pred ------------------ccc--ccccEEEEEeeEEEecCeEEeCCCeEEecCEEEEccCCCCCCChhH-------HHHH
Q 023975 71 ------------------TDY--LVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTR-------TERL 123 (274)
Q Consensus 71 ------------------~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~li~a~G~~~~~~~~~-------~~~~ 123 (274)
... ..+++++......++.+.+.+ ++.++.||++++|||+.|..|+++ ...+
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~g~~~~~~~~~~ 160 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGRPSHPDIPGVEYGIDSDGF 160 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEEECCCCSTTGGGSBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCCCCCCCCCCccceecHHHh
Confidence 000 125677776666667677777 677899999999999886655322 1222
Q ss_pred HH----------ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCC
Q 023975 124 NQ----------YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSE 193 (274)
Q Consensus 124 ~~----------~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~ 193 (274)
.. +++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.|++++++++|.+++.++
T Consensus 161 ~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~ 238 (450)
T 1ges_A 161 FALPALPERVAVVGAGYIGVELGGVIN--GLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNT 238 (450)
T ss_dssp HHCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECT
T ss_pred hhhhhcCCeEEEECCCHHHHHHHHHHH--hcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC
Confidence 22 334899999999998 568999999999988888889999999999999999999999999998655
Q ss_pred C-ceeEECCCCcEEeecEEEEcccCCCCchhh--cccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCC
Q 023975 194 G-SDTYLTSTGDTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 194 ~-~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
+ ...+.+.+|+++++|.||+|+|..|+.+++ ...++ .++++|++.||++++| +.|+|||+|||++.+...
T Consensus 239 ~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~ 311 (450)
T 1ges_A 239 DGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGV--KTNEKGYIVVDKYQNT-NIEGIYAVGDNTGAVELT 311 (450)
T ss_dssp TSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTC--CBCTTSCBCCCTTSBC-SSTTEEECSGGGTSCCCH
T ss_pred CcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCc--eECCCCCEeECCCCcc-CCCCEEEEeccCCCCccH
Confidence 4 367888899899999999999999998754 44444 6678899999999998 899999999999765443
No 4
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=2.2e-35 Score=253.14 Aligned_cols=253 Identities=21% Similarity=0.222 Sum_probs=186.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhh--cCCcEEEEc--------CCCCceeeccceee------------------ecCC---
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ--FSADVTLID--------PKEYFEITWASLRA------------------MVEP--- 60 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~--~g~~v~vie--------~~~~~g~~~~~~~~------------------~~~~--- 60 (274)
+++||+|||||++|+++|+.|+ .|++|+||| +...+|+.|..... ....
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 3589999999999999999996 499999999 35566654422100 0000
Q ss_pred ------ccccceeee------------ccccc--c-ccEEEEEeeEEEecCeEEeC---C-----CeEEecCEEEEccCC
Q 023975 61 ------SFGKRSVIN------------HTDYL--V-NGRIVASPAINITENEVLTA---E-----GRRVVYDYLVIATGH 111 (274)
Q Consensus 61 ------~~~~~~~~~------------~~~~~--~-~~~~~~~~~~~~~~~~v~~~---~-----~~~~~~~~li~a~G~ 111 (274)
......... +...+ . +++++...+..++.+.+.++ + +..+.||++|+|||+
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 000000000 00001 2 56777777666777767665 4 678999999999999
Q ss_pred CCCCChhHH-------HHHH----------HccCCchhhhHHHHhhhhCC-CCeEEEEeCCCccCCcCChhHHHHHHHHH
Q 023975 112 KDPVPKTRT-------ERLN----------QYQAGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTRDWL 173 (274)
Q Consensus 112 ~~~~~~~~~-------~~~~----------~~~~g~~~~e~a~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (274)
.|..|+++. ..+. .+++|.+++|+|..+....+ +.+|+++.+.+.+++.+++.+.+.+.+.+
T Consensus 166 ~p~~p~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l 245 (495)
T 2wpf_A 166 WPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQL 245 (495)
T ss_dssp EECCCCCTTGGGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHH
T ss_pred CcCCCCCCCccccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHH
Confidence 866554221 2221 23448999999999985333 88999999999999888999999999999
Q ss_pred HhCCcEEEcCceeeeeccCCC-ceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCC
Q 023975 174 ISKKVDVKLGERVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKN 252 (274)
Q Consensus 174 ~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 252 (274)
++.||++++++.|.+++.+++ ...+.+.+|+++++|.||+|+|..|+.+++....+++.++++|+|.||++++| +.|+
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~ 324 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPN 324 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTT
T ss_pred HhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCcc-CCCC
Confidence 999999999999999986654 46788889989999999999999999885432333346777899999999998 8999
Q ss_pred eEEeccccCCCCC
Q 023975 253 IFAIGDITDIRVS 265 (274)
Q Consensus 253 i~~~Gd~~~~~~~ 265 (274)
|||+|||++.+..
T Consensus 325 IyA~GD~~~~~~l 337 (495)
T 2wpf_A 325 IYAIGDITDRLML 337 (495)
T ss_dssp EEECGGGGCSCCC
T ss_pred EEEEeccCCCccC
Confidence 9999999986543
No 5
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.9e-35 Score=253.25 Aligned_cols=251 Identities=22% Similarity=0.249 Sum_probs=189.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee---------------------e-cC---Cccccc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA---------------------M-VE---PSFGKR 65 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~---------------------~-~~---~~~~~~ 65 (274)
.++||+|||||++|+++|+.|+ .|++|+|+|| +.+|+.+..... + +. ..+...
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 103 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWE 103 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 3589999999999999999998 5999999999 556654321100 0 00 000000
Q ss_pred eee--------e----cccc--ccccEEEEEeeEEEecCeEEeC-CCeEEecCEEEEccCCCCC-CChhHHH--------
Q 023975 66 SVI--------N----HTDY--LVNGRIVASPAINITENEVLTA-EGRRVVYDYLVIATGHKDP-VPKTRTE-------- 121 (274)
Q Consensus 66 ~~~--------~----~~~~--~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~li~a~G~~~~-~~~~~~~-------- 121 (274)
... . .... ..+++++......++...+.+. ++..+.||++++|||..|. .|..+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~ 183 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDLCLTSNE 183 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGGSBCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccccccHHH
Confidence 000 0 0001 1256677777777777777776 7778999999999998876 5542211
Q ss_pred ---------HHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccC
Q 023975 122 ---------RLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS 192 (274)
Q Consensus 122 ---------~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 192 (274)
.+..+++|.+++|++..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.|++++.+++|++++.+
T Consensus 184 ~~~~~~~~~~v~ViGgG~~g~e~A~~l~--~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~ 261 (484)
T 3o0h_A 184 IFDLEKLPKSIVIVGGGYIGVEFANIFH--GLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQST 261 (484)
T ss_dssp GGGCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEEC
T ss_pred HHhHHhcCCcEEEECcCHHHHHHHHHHH--HcCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEee
Confidence 1122344889999999988 56889999999999888889999999999999999999999999999988
Q ss_pred CCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCC
Q 023975 193 EGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 193 ~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
++.+.+.+.+|+++++|.||+|+|..|+..++.....++.++++|++.||++++| +.|+||++|||++.+...
T Consensus 262 ~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~~ 334 (484)
T 3o0h_A 262 ENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGHIQLT 334 (484)
T ss_dssp SSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTSCCCH
T ss_pred CCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCCCcCH
Confidence 7778889999999999999999999999887433333446788899999999998 899999999999866544
No 6
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=3.4e-34 Score=244.05 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=186.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecccee-----------------------eecCC--ccccc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR-----------------------AMVEP--SFGKR 65 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~-----------------------~~~~~--~~~~~ 65 (274)
.++||+|||||++|+++|+.|+ .|++|+|||++ .+|+.|.... .+... .....
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 3589999999999999999997 59999999998 5555442110 00000 00000
Q ss_pred eeee------------cccc--ccccEEEEEeeEEEecCeEEeCCCeEEecCEEEEccCCCCCCChhH-------HHHHH
Q 023975 66 SVIN------------HTDY--LVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTR-------TERLN 124 (274)
Q Consensus 66 ~~~~------------~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~li~a~G~~~~~~~~~-------~~~~~ 124 (274)
.... +... ..+++++......++.+.+.+ ++.++.||++|+|||+.|..|+++ ...+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~ 160 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPIVPRLPGAELGITSDGFF 160 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEECCCSCTTGGGSBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCCCCCCCCccceecHHHHh
Confidence 0000 0000 124677766666666677777 677899999999999886655322 12222
Q ss_pred H----------ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCC
Q 023975 125 Q----------YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEG 194 (274)
Q Consensus 125 ~----------~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~ 194 (274)
. +++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.|++++++++|++++.+++
T Consensus 161 ~~~~~~~~vvVvGgG~~g~e~A~~l~--~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~ 238 (463)
T 2r9z_A 161 ALQQQPKRVAIIGAGYIGIELAGLLR--SFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQ 238 (463)
T ss_dssp HCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETT
T ss_pred hhhccCCEEEEECCCHHHHHHHHHHH--hcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 2 344899999999998 5689999999999888888888999999999999999999999999987655
Q ss_pred ceeEECCCCc-EEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCC
Q 023975 195 SDTYLTSTGD-TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 195 ~~~v~~~~g~-~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
...+.+++|+ ++++|.||+|+|..|+.+++.....++.++++|+|.||++++| +.|+||++|||++.+...
T Consensus 239 ~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~~ 310 (463)
T 2r9z_A 239 GTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGRDQLT 310 (463)
T ss_dssp EEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTSCCCH
T ss_pred eEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCCcccH
Confidence 6778888998 8999999999999999875422223336678899999999998 899999999999765443
No 7
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=1.1e-33 Score=240.42 Aligned_cols=244 Identities=20% Similarity=0.205 Sum_probs=178.7
Q ss_pred CcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCceeeccceeeecCCccc--cceeeecccccc--ccEEE-EEeeE
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTDYLV--NGRIV-ASPAI 85 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~-~~~~~ 85 (274)
+||+|||||++|+++|+.|+ . |++|+|||+++.+++.+..+......... ........+++. ++++. ...+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 69999999999999999997 3 89999999999887555443333222211 111111111111 33442 23334
Q ss_pred EEec--CeEEe---CCCeEEecCEEEEccCCCCCCChhHH---------------H----------HHHHccCCchhhhH
Q 023975 86 NITE--NEVLT---AEGRRVVYDYLVIATGHKDPVPKTRT---------------E----------RLNQYQAGPTGVEL 135 (274)
Q Consensus 86 ~~~~--~~v~~---~~~~~~~~~~li~a~G~~~~~~~~~~---------------~----------~~~~~~~g~~~~e~ 135 (274)
.++. +.+.. .++..+.||++++|||+.|..|+.+. . ++..+++|.+++|+
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~ 162 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEA 162 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHH
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHH
Confidence 4443 34433 25568999999999999876553211 0 11223458999999
Q ss_pred HHHhhhhCCCCeEEEEeCCCccCCc-CChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEc
Q 023975 136 AGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLC 214 (274)
Q Consensus 136 a~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a 214 (274)
|..+. ..+.+++++.+.+.+++. +++.+.+.+.+.+++.||++++++.|++++..++.+.+.++++ +++||.||+|
T Consensus 163 A~~l~--~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 163 IDFLV--KMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFA 239 (452)
T ss_dssp HHHHH--HTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEEC
T ss_pred HHHHH--hCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEEC
Confidence 99998 568999999999998875 7899999999999999999999999999986666667777777 8999999999
Q ss_pred ccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 215 TGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 215 ~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
+|+.|+.+++... +.++++|++.||++++| +.|+|||+|||++.+.
T Consensus 240 ~G~~p~~~~l~~~---~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~ 285 (452)
T 3oc4_A 240 LNLHPQLAYLDKK---IQRNLDQTIAVDAYLQT-SVPNVFAIGDCISVMN 285 (452)
T ss_dssp SCCBCCCSSCCTT---SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEE
T ss_pred cCCCCChHHHHhh---hccCCCCCEEECcCccC-CCCCEEEEEeeEEecc
Confidence 9999999887543 36778999999999999 8999999999998753
No 8
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=3.3e-34 Score=245.79 Aligned_cols=250 Identities=18% Similarity=0.192 Sum_probs=187.8
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccce------------------eeecCCccc-cceeeecc-
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASL------------------RAMVEPSFG-KRSVINHT- 71 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~------------------~~~~~~~~~-~~~~~~~~- 71 (274)
++||+||||||+|+++|..|++ |++|+|+|++. +|+.+... .......+. ......+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 5899999999999999999985 99999999975 55443110 000000000 00000000
Q ss_pred --------------------ccccccEEEEEeeEEEecCeEEeCCCeEEecCEEEEccCCCCCCChhHH---------HH
Q 023975 72 --------------------DYLVNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRT---------ER 122 (274)
Q Consensus 72 --------------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~li~a~G~~~~~~~~~~---------~~ 122 (274)
......+++.......+.+.+.++++.++.||++|+|||+.|..|+... ..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~~~~v~t~~~ 166 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLLTNDN 166 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECCCCHHHHTTGGGEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCccCCcEEcHHH
Confidence 0011233455555556667888888889999999999999998887321 11
Q ss_pred HH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccC
Q 023975 123 LN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS 192 (274)
Q Consensus 123 ~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 192 (274)
+. .+++|.+++|+|..+. ..+.+|+++.+.+.+++.+++.+.+.+.+.+++. |++++++.+++++.+
T Consensus 167 ~~~~~~~~k~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~ 243 (492)
T 3ic9_A 167 LFELNDLPKSVAVFGPGVIGLELGQALS--RLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEK 243 (492)
T ss_dssp HTTCSSCCSEEEEESSCHHHHHHHHHHH--HTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEEC
T ss_pred HhhhhhcCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEc
Confidence 21 1334899999999998 5689999999999999888999999999999988 999999999999887
Q ss_pred CCceeEECC--CC--cEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeC-CCccccCCCCeEEeccccCCCCCCC
Q 023975 193 EGSDTYLTS--TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVD-ENLRVKGQKNIFAIGDITDIRVSAS 267 (274)
Q Consensus 193 ~~~~~v~~~--~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~i~~~Gd~~~~~~~~~ 267 (274)
++.+.+.+. +| +++++|.||+|+|..|+.+++.....++.++++|++.|| ++++| +.|+|||+|||++.+...+
T Consensus 244 ~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~~~~~~ 322 (492)
T 3ic9_A 244 EDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNTLTLLH 322 (492)
T ss_dssp SSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTSSCSHH
T ss_pred CCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCCCCccHH
Confidence 777777664 67 689999999999999999885434444578889999999 89999 8999999999998776543
No 9
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=8.2e-35 Score=249.41 Aligned_cols=250 Identities=18% Similarity=0.189 Sum_probs=185.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh--cCCcEEEEc--------CCCCceeeccceee-----------------------ecC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ--FSADVTLID--------PKEYFEITWASLRA-----------------------MVE 59 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~--~g~~v~vie--------~~~~~g~~~~~~~~-----------------------~~~ 59 (274)
++||+|||||++|+++|+.|+ .|++|+||| +...+|+.+..... ...
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 589999999999999999995 499999999 35556654322100 000
Q ss_pred --C--ccccceeee------------cccc--cc-ccEEEEEeeEEEecCeEEeC-----CC---eEEecCEEEEccCCC
Q 023975 60 --P--SFGKRSVIN------------HTDY--LV-NGRIVASPAINITENEVLTA-----EG---RRVVYDYLVIATGHK 112 (274)
Q Consensus 60 --~--~~~~~~~~~------------~~~~--~~-~~~~~~~~~~~~~~~~v~~~-----~~---~~~~~~~li~a~G~~ 112 (274)
. .+....... .... .. +++++...+..++.+.+... ++ ..+.||++|+|||+.
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~ 162 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSW 162 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCCC
Confidence 0 000000000 0001 12 56777777767777766653 56 689999999999998
Q ss_pred CCCChhH-------HHHH----------HHccCCchhhhHHHHhhhhCC-CCeEEEEeCCCccCCcCChhHHHHHHHHHH
Q 023975 113 DPVPKTR-------TERL----------NQYQAGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLEFIGPKAGDKTRDWLI 174 (274)
Q Consensus 113 ~~~~~~~-------~~~~----------~~~~~g~~~~e~a~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (274)
|..|+++ ...+ ..+++|.+++|+|..+....+ +.+++++.+.+.+++.+++.+.+.+.+.++
T Consensus 163 p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~ 242 (490)
T 1fec_A 163 PQHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLR 242 (490)
T ss_dssp ECCCCSBTGGGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCccceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHH
Confidence 6655422 1122 123458999999999984322 889999999999998889999999999999
Q ss_pred hCCcEEEcCceeeeeccCCC-ceeEECCCCcEEeecEEEEcccCCCCchhh--cccccccccCCCCcEEeCCCccccCCC
Q 023975 175 SKKVDVKLGERVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQK 251 (274)
Q Consensus 175 ~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~ 251 (274)
+.||++++++.|++++.+++ .+.+.+++|+++++|.||+|+|..|+.+++ ...++ .++++|+|.||++++| +.|
T Consensus 243 ~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl--~~~~~G~I~Vd~~~~t-~~~ 319 (490)
T 1fec_A 243 ANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGV--EVAKNGAIKVDAYSKT-NVD 319 (490)
T ss_dssp HTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTC--CBCTTSCBCCCTTCBC-SST
T ss_pred hCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCc--cCCCCCCEEECCCCcc-CCC
Confidence 99999999999999987654 467888889899999999999999998754 44444 6778899999999998 899
Q ss_pred CeEEeccccCCCCC
Q 023975 252 NIFAIGDITDIRVS 265 (274)
Q Consensus 252 ~i~~~Gd~~~~~~~ 265 (274)
+|||+|||++.+..
T Consensus 320 ~IyA~GD~~~~~~l 333 (490)
T 1fec_A 320 NIYAIGDVTDRVML 333 (490)
T ss_dssp TEEECGGGGCSCCC
T ss_pred CEEEEeccCCCccC
Confidence 99999999976543
No 10
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1e-34 Score=248.02 Aligned_cols=249 Identities=16% Similarity=0.179 Sum_probs=183.8
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeee-----------------------cC----Ccccc
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM-----------------------VE----PSFGK 64 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~-----------------------~~----~~~~~ 64 (274)
++||+|||||++|+++|+.|+ .|++|+|+|+++.+|+.|...... +. .....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 489999999999999999997 499999999998877654311000 00 00000
Q ss_pred ceeee------------ccccc--cccEEEEEeeEEEecC--eEEeCCC--eEEecCEEEEccCCCCCCChhH-------
Q 023975 65 RSVIN------------HTDYL--VNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDPVPKTR------- 119 (274)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~li~a~G~~~~~~~~~------- 119 (274)
..... ...++ .+++++......++.+ .+.+.+| ..+.||++|+|||+.|..|+..
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v 161 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVV 161 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCce
Confidence 00000 01111 2466666666556655 4455567 7899999999999886554311
Q ss_pred --HHHHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHH-HhCCcEEEcCcee
Q 023975 120 --TERLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWL-ISKKVDVKLGERV 186 (274)
Q Consensus 120 --~~~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~i~~~~~v 186 (274)
...+. .+++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+ ++.||+++++++|
T Consensus 162 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v 239 (468)
T 2qae_A 162 LSSTGALALPRVPKTMVVIGGGVIGLELGSVWA--RLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKV 239 (468)
T ss_dssp ECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEE
T ss_pred echHHHhhcccCCceEEEECCCHHHHHHHHHHH--HhCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 12222 2345899999999998 5689999999999999888999999999999 9999999999999
Q ss_pred eeeccCCCceeEECC--CC--cEEeecEEEEcccCCCCchhh--cccccccccCCCCcEEeCCCccccCCCCeEEecccc
Q 023975 187 NLDSVSEGSDTYLTS--TG--DTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 260 (274)
Q Consensus 187 ~~i~~~~~~~~v~~~--~g--~~~~~d~vv~a~G~~~~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~ 260 (274)
.+++.+++.+.+.+. +| +++++|.||+|+|..|+.+++ ...++ .++++|+|.||++++| +.|+|||+|||+
T Consensus 240 ~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 316 (468)
T 2qae_A 240 VGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINV--AKNERGFVKIGDHFET-SIPDVYAIGDVV 316 (468)
T ss_dssp EEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTC--CBCTTSCBCCCTTSBC-SSTTEEECGGGB
T ss_pred EEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCC--ccCCCCCEeECCCccc-CCCCEEEeeccC
Confidence 999876666666655 66 689999999999999998874 44444 5677899999999998 899999999999
Q ss_pred C-CCCCC
Q 023975 261 D-IRVSA 266 (274)
Q Consensus 261 ~-~~~~~ 266 (274)
+ .+...
T Consensus 317 ~~~~~~~ 323 (468)
T 2qae_A 317 DKGPMLA 323 (468)
T ss_dssp SSSCSCH
T ss_pred CCCCccH
Confidence 8 55443
No 11
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=7.4e-33 Score=237.16 Aligned_cols=251 Identities=25% Similarity=0.308 Sum_probs=180.7
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeecCCccc-cceeeecc----ccccccEEEEEeeEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFG-KRSVINHT----DYLVNGRIVASPAIN 86 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~ 86 (274)
..+|+|||||++|+++|..|++ +++|+|||+++++-+.+- +......... .....+.. ....+++++...+..
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~Pl-L~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v~~ 120 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPL-LPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATS 120 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGG-GGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEEEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccc-hhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEEEEE
Confidence 4689999999999999999974 999999999987544321 1111111111 11111111 112356777777777
Q ss_pred Eec--CeEEe--------------------CCCeEEecCEEEEccCCCCCC---ChhHH---------------HH----
Q 023975 87 ITE--NEVLT--------------------AEGRRVVYDYLVIATGHKDPV---PKTRT---------------ER---- 122 (274)
Q Consensus 87 ~~~--~~v~~--------------------~~~~~~~~~~li~a~G~~~~~---~~~~~---------------~~---- 122 (274)
++. +.|.+ .++.++.||+||+|||+.+.. |+... ..
T Consensus 121 ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~ 200 (502)
T 4g6h_A 121 INPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAAN 200 (502)
T ss_dssp EEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHH
T ss_pred EEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHH
Confidence 663 34443 346789999999999998554 44210 00
Q ss_pred -------------------HHHccCCchhhhHHHHhhhhC------------CCCeEEEEeCCCccCCcCChhHHHHHHH
Q 023975 123 -------------------LNQYQAGPTGVELAGEIAVDF------------PEKKVTLVHKGSRLLEFIGPKAGDKTRD 171 (274)
Q Consensus 123 -------------------~~~~~~g~~~~e~a~~l~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
+..+++|.+|+|+|.++.+.. ...++++++..+.+++.+++.+.+.+.+
T Consensus 201 ~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~ 280 (502)
T 4g6h_A 201 LEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQS 280 (502)
T ss_dssp HHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHH
T ss_pred HHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHH
Confidence 112445899999998876421 1358999999999999999999999999
Q ss_pred HHHhCCcEEEcCceeeeeccCCCceeEECCCCc----EEeecEEEEcccCCCCch---hhcccccccccCCCCcEEeCCC
Q 023975 172 WLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD----TINADCHFLCTGKPVGSD---WLKDTILKDSLDTHGMLMVDEN 244 (274)
Q Consensus 172 ~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~----~~~~d~vv~a~G~~~~~~---~~~~~~~~~~~~~~g~~~v~~~ 244 (274)
.+++.||++++++.|++++.+.........+|+ +++||.||+|+|..|++. +... ++...+.+|+|.||++
T Consensus 281 ~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~--~~~~~~~~g~I~Vd~~ 358 (502)
T 4g6h_A 281 HLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKK--IPEQNSSKRGLAVNDF 358 (502)
T ss_dssp HHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHH--SGGGTTCCSSEEBCTT
T ss_pred HHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHh--ccccccCCCceeECCc
Confidence 999999999999999999755444455667764 699999999999998632 2222 2335677899999999
Q ss_pred ccccCCCCeEEeccccCCCCCC
Q 023975 245 LRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 245 ~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
+|++++|+|||+|||+..|.++
T Consensus 359 lq~~~~~~IfAiGD~a~~~~p~ 380 (502)
T 4g6h_A 359 LQVKGSNNIFAIGDNAFAGLPP 380 (502)
T ss_dssp SBBTTCSSEEECGGGEESSSCC
T ss_pred cccCCCCCEEEEEcccCCCCCC
Confidence 9998899999999999877655
No 12
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.6e-33 Score=237.20 Aligned_cols=247 Identities=19% Similarity=0.192 Sum_probs=187.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCc--EEEEcCCCCceeecccee-eecCCcc-ccceeeeccccc--cccEEEEE-e
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSAD--VTLIDPKEYFEITWASLR-AMVEPSF-GKRSVINHTDYL--VNGRIVAS-P 83 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~--v~vie~~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~-~ 83 (274)
+++||+|||||++|+++|+.|+ +|++ |+|+|+++.+++....+. ..+.... .........+++ .++++... .
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 87 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCE
Confidence 4589999999999999999997 4776 999999988765433332 1221111 111111122222 24566554 4
Q ss_pred eEEEec--CeEEeCCCeEEecCEEEEccCCCCCCChhH---------------HHHHH-----------HccCCchhhhH
Q 023975 84 AINITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTR---------------TERLN-----------QYQAGPTGVEL 135 (274)
Q Consensus 84 ~~~~~~--~~v~~~~~~~~~~~~li~a~G~~~~~~~~~---------------~~~~~-----------~~~~g~~~~e~ 135 (274)
+..++. +.+.+.++..+.||++++|||+.|..|+.+ ...+. .+++|.+++|+
T Consensus 88 v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~ 167 (415)
T 3lxd_A 88 VVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEA 167 (415)
T ss_dssp EEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHH
T ss_pred EEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHH
Confidence 555554 378888898999999999999886654311 11111 23458899999
Q ss_pred HHHhhhhCCCCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEECCCCcEEeecEEEE
Q 023975 136 AGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFL 213 (274)
Q Consensus 136 a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~ 213 (274)
|..+. ..+.+++++.+.+.+++ ..++.+.+.+.+.+++.||++++++.|++++.+++.+ .+.+++|++++||.||+
T Consensus 168 A~~l~--~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~ 245 (415)
T 3lxd_A 168 AAVLT--KFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIV 245 (415)
T ss_dssp HHHHH--HTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEE
T ss_pred HHHHH--hcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEE
Confidence 99998 56899999999998877 4678899999999999999999999999998766554 68889999999999999
Q ss_pred cccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 214 CTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 214 a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
|+|..|+.+++...++. .+ + ++.||++++| +.|+||++|||+..+..
T Consensus 246 a~G~~p~~~l~~~~gl~--~~-~-gi~vd~~~~t-~~~~iyA~GD~a~~~~~ 292 (415)
T 3lxd_A 246 GIGIVPCVGALISAGAS--GG-N-GVDVDEFCRT-SLTDVYAIGDCAAHAND 292 (415)
T ss_dssp CSCCEESCHHHHHTTCC--CS-S-SEECCTTCBC-SSTTEEECGGGEEEECG
T ss_pred CCCCccChHHHHhCCCC--cC-C-CEEECCCCCc-CCCCEEEEEeeeeecCc
Confidence 99999999988877763 33 4 4999999999 89999999999988764
No 13
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=4.4e-34 Score=241.42 Aligned_cols=243 Identities=17% Similarity=0.276 Sum_probs=181.2
Q ss_pred cEEEEcCChHHHHHHHHhhc-C--CcEEEEcCCCCceeeccceeeecCCcccc-c--eeeecccccc--ccEEEE-EeeE
Q 023975 15 RVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEITWASLRAMVEPSFGK-R--SVINHTDYLV--NGRIVA-SPAI 85 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~~-g--~~v~vie~~~~~g~~~~~~~~~~~~~~~~-~--~~~~~~~~~~--~~~~~~-~~~~ 85 (274)
+|+|||||+||++||..|++ | .+|+|||+++...+....+...+...... . ......+++. ++++.. ..+.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 69999999999999999973 4 68999999887655433332222211111 0 0111111221 444433 2344
Q ss_pred EEec--CeEEe-----CCCeEEecCEEEEccCCCCCCChhHH------------HH------------HHHccCCchhhh
Q 023975 86 NITE--NEVLT-----AEGRRVVYDYLVIATGHKDPVPKTRT------------ER------------LNQYQAGPTGVE 134 (274)
Q Consensus 86 ~~~~--~~v~~-----~~~~~~~~~~li~a~G~~~~~~~~~~------------~~------------~~~~~~g~~~~e 134 (274)
.++. +.+.. .++.++.||++|+|||+.|..|+.+. .. +..+++|.+++|
T Consensus 82 ~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E 161 (437)
T 4eqs_A 82 AINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLE 161 (437)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHH
T ss_pred EEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhh
Confidence 5543 33332 12346889999999999877665321 11 122445999999
Q ss_pred HHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEc
Q 023975 135 LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLC 214 (274)
Q Consensus 135 ~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a 214 (274)
+|..+. ..+.+++++.+.+.+++..++.+.+.+.+.+++.||+++.++.|++++. ..+.+++|+++++|.|++|
T Consensus 162 ~A~~l~--~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~----~~v~~~~g~~~~~D~vl~a 235 (437)
T 4eqs_A 162 VLENLY--ERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAING----NEITFKSGKVEHYDMIIEG 235 (437)
T ss_dssp HHHHHH--HHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEET----TEEEETTSCEEECSEEEEC
T ss_pred hHHHHH--hcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecC----CeeeecCCeEEeeeeEEEE
Confidence 999998 5689999999999999999999999999999999999999999998863 2477889999999999999
Q ss_pred ccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCC
Q 023975 215 TGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 215 ~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
+|..|+.++++..++ .++++|+|.||++++| +.|+|||+|||++.|...
T Consensus 236 ~G~~Pn~~~~~~~gl--~~~~~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~ 284 (437)
T 4eqs_A 236 VGTHPNSKFIESSNI--KLDRKGFIPVNDKFET-NVPNIYAIGDIATSHYRH 284 (437)
T ss_dssp CCEEESCGGGTTSSC--CCCTTSCEECCTTCBC-SSTTEEECGGGEEEEBSS
T ss_pred eceecCcHHHHhhhh--hhccCCcEecCCCccC-CCCCEEEEEEccCccccc
Confidence 999999998887776 5788999999999999 899999999999877653
No 14
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-34 Score=242.39 Aligned_cols=248 Identities=19% Similarity=0.222 Sum_probs=183.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecccee--------------eecC--Cc--ccc-------ce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR--------------AMVE--PS--FGK-------RS 66 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~--------------~~~~--~~--~~~-------~~ 66 (274)
++||+|||||++|+++|+.|+ .|++|+|||++ .+|+.|.... .... .. +.. ..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 589999999999999999997 59999999998 4555442110 0000 00 000 00
Q ss_pred eeec------------------cccc--cccEEEEEeeEEEecC--eEEeCCCe--EEecCEEEEccCCCCCCC-hhH--
Q 023975 67 VINH------------------TDYL--VNGRIVASPAINITEN--EVLTAEGR--RVVYDYLVIATGHKDPVP-KTR-- 119 (274)
Q Consensus 67 ~~~~------------------~~~~--~~~~~~~~~~~~~~~~--~v~~~~~~--~~~~~~li~a~G~~~~~~-~~~-- 119 (274)
...+ ...+ .+++++...+..++.. .+.+.++. .+.||++|+|||+.|..| +++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~g~ 169 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGF 169 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTSTTG
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCCc
Confidence 0000 0011 2466666665555554 34445665 799999999999986665 322
Q ss_pred -----HHHHHH----------ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCc
Q 023975 120 -----TERLNQ----------YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGE 184 (274)
Q Consensus 120 -----~~~~~~----------~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~ 184 (274)
...+.. +++|.+++|+|..+. ..+.+|+++.+.+.+++.+++.+.+.+.+.+++.||++++++
T Consensus 170 ~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~ 247 (479)
T 2hqm_A 170 ELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFH--GLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLS 247 (479)
T ss_dssp GGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSC
T ss_pred ccccchHHHhcccccCCeEEEECCCHHHHHHHHHHH--HcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCC
Confidence 122222 345899999999998 568999999999998888899999999999999999999999
Q ss_pred eeeeeccCCCc--eeEECCCC-cEEeecEEEEcccCCCCchh-hcccccccccCCCCcEEeCCCccccCCCCeEEecccc
Q 023975 185 RVNLDSVSEGS--DTYLTSTG-DTINADCHFLCTGKPVGSDW-LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 260 (274)
Q Consensus 185 ~v~~i~~~~~~--~~v~~~~g-~~~~~d~vv~a~G~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~ 260 (274)
+|++++.+++. ..+.+++| +++++|.||+|+|..|+..+ +...++ .++++|++.||++++| +.|+|||+|||+
T Consensus 248 ~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 324 (479)
T 2hqm_A 248 KIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGI--KLNSHDQIIADEYQNT-NVPNIYSLGDVV 324 (479)
T ss_dssp CEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTC--CBCTTSCBCCCTTCBC-SSTTEEECGGGT
T ss_pred EEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCc--eECCCCCEeECCCCcc-CCCCEEEEEecC
Confidence 99999865444 67888888 78999999999999998855 455555 6778899999999998 899999999998
Q ss_pred CCCCCC
Q 023975 261 DIRVSA 266 (274)
Q Consensus 261 ~~~~~~ 266 (274)
+.+...
T Consensus 325 ~~~~~~ 330 (479)
T 2hqm_A 325 GKVELT 330 (479)
T ss_dssp TSSCCH
T ss_pred CCcccH
Confidence 765543
No 15
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.5e-34 Score=248.63 Aligned_cols=249 Identities=20% Similarity=0.200 Sum_probs=185.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c---CCcEEEEcCCCCceeecccee------------------eecCCc---------
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASLR------------------AMVEPS--------- 61 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~---g~~v~vie~~~~~g~~~~~~~------------------~~~~~~--------- 61 (274)
++||+|||||++|+++|+.|+ . |++|+|||+++ +|+.+.... ......
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 489999999999999999996 5 99999999988 655432110 000000
Q ss_pred cccceeee------------ccccc--cccEEEEEeeEEEec------C--eEEeCCCe--EEecCEEEEccCCCCCCCh
Q 023975 62 FGKRSVIN------------HTDYL--VNGRIVASPAINITE------N--EVLTAEGR--RVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 62 ~~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~------~--~v~~~~~~--~~~~~~li~a~G~~~~~~~ 117 (274)
........ ..+++ .+++++...+..++. + .+..+++. .+.||++++|||+.|..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~ 160 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILP 160 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCC
Confidence 00000000 01111 246666666555554 3 34455665 7999999999999876654
Q ss_pred hHH-------------------HHHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCc
Q 023975 118 TRT-------------------ERLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV 178 (274)
Q Consensus 118 ~~~-------------------~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 178 (274)
... +++..+++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||
T Consensus 161 i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV 238 (499)
T 1xdi_A 161 SAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYT--ELGVPVTVVASQDHVLPYEDADAALVLEESFAERGV 238 (499)
T ss_dssp GGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHH--HTTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCC
Confidence 221 11222345889999999988 568899999999999888899999999999999999
Q ss_pred EEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchh--hcccccccccCCCCcEEeCCCccccCCCCeEEe
Q 023975 179 DVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAI 256 (274)
Q Consensus 179 ~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~--~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~ 256 (274)
+++++++|++++.+++.+.+.+.+|+++++|.||+|+|..|+.++ ++..++ .++++|+|.||++++| +.|+|||+
T Consensus 239 ~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl--~~~~~G~i~Vd~~~~t-~~~~IyA~ 315 (499)
T 1xdi_A 239 RLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGI--QLGRGNYLTVDRVSRT-LATGIYAA 315 (499)
T ss_dssp EEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTC--CCBTTTBCCCCSSSBC-SSTTEEEC
T ss_pred EEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCc--eECCCCCEEECCCccc-CCCCEEEE
Confidence 999999999998776667788888889999999999999999888 444444 6677899999999999 89999999
Q ss_pred ccccCCCCCCC
Q 023975 257 GDITDIRVSAS 267 (274)
Q Consensus 257 Gd~~~~~~~~~ 267 (274)
|||++.+...+
T Consensus 316 GD~~~~~~l~~ 326 (499)
T 1xdi_A 316 GDCTGLLPLAS 326 (499)
T ss_dssp SGGGTSCSCHH
T ss_pred eccCCCcccHH
Confidence 99998765443
No 16
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=6.1e-34 Score=243.12 Aligned_cols=249 Identities=22% Similarity=0.270 Sum_probs=182.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecccee---------------------ee--cC---Ccccc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR---------------------AM--VE---PSFGK 64 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~---------------------~~--~~---~~~~~ 64 (274)
.++||+|||||++|+++|+.|+ .|++|+|||++ .+|+.|.... .. +. .....
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 3589999999999999999997 49999999998 5555432110 00 00 00000
Q ss_pred ceee-------------eccccc---cccEEEEEeeEEEecC--eEEeCCC--eEEecCEEEEccCCCCCCChhH-----
Q 023975 65 RSVI-------------NHTDYL---VNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDPVPKTR----- 119 (274)
Q Consensus 65 ~~~~-------------~~~~~~---~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~li~a~G~~~~~~~~~----- 119 (274)
..+. .+.+++ .+++++...+..++.. .+.+.+| ..+.||++|+|||+.|..|+++
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~ 161 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKES 161 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTTTS
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCCcC
Confidence 0000 011111 1567777666666655 4555677 6899999999999876554321
Q ss_pred ----HHHHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCce
Q 023975 120 ----TERLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 185 (274)
Q Consensus 120 ----~~~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~ 185 (274)
...+. .+++|.+++|+|..+. ..+.+++++.+.+.+++ .++.+.+.+.+.+++.|++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~ 238 (467)
T 1zk7_A 162 PYWTSTEALASDTIPERLAVIGSSVVALELAQAFA--RLGSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQ 238 (467)
T ss_dssp CCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCC
T ss_pred ceecHHHHhcccccCCEEEEECCCHHHHHHHHHHH--HcCCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCE
Confidence 12222 2345899999999998 56889999999999888 8889999999999999999999999
Q ss_pred eeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 186 VNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 186 v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
|++++.+++...+.++ ++++++|.||+|+|..|+.+++.....++.++++|++.||++++| +.|+||++|||++.|..
T Consensus 239 v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~~~ 316 (467)
T 1zk7_A 239 ASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQPQF 316 (467)
T ss_dssp EEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSSCCC
T ss_pred EEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCCccc
Confidence 9999876655566665 458999999999999999876432233345677899999999998 89999999999987754
Q ss_pred C
Q 023975 266 A 266 (274)
Q Consensus 266 ~ 266 (274)
.
T Consensus 317 ~ 317 (467)
T 1zk7_A 317 V 317 (467)
T ss_dssp H
T ss_pred H
Confidence 3
No 17
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=9.1e-34 Score=244.79 Aligned_cols=251 Identities=19% Similarity=0.245 Sum_probs=188.0
Q ss_pred CCCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeee-----------------------cCCcccc--
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM-----------------------VEPSFGK-- 64 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~-----------------------~~~~~~~-- 64 (274)
..++||+|||||++|+++|++|++ |++|+|||+++.+|+.+...... .......
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 345899999999999999999974 99999999998777554211000 0000000
Q ss_pred --ceeee-----cc---ccc-------cccEEE-EEeeEEEecCeEEeCCCeEEecCEEEEccCCCCCCChhH-------
Q 023975 65 --RSVIN-----HT---DYL-------VNGRIV-ASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPKTR------- 119 (274)
Q Consensus 65 --~~~~~-----~~---~~~-------~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~li~a~G~~~~~~~~~------- 119 (274)
..... .. .++ .+++++ ...+..++.+.+.+. +..+.||++|+|||+.|..|+++
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~~p~i~G~~~~~v 199 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPGTLDVPGVNAKGV 199 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECCCCCSTTTTSBTE
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCCCCCCCCcccCcE
Confidence 00000 01 111 245555 555555666667665 77899999999999886655421
Q ss_pred --HHHHH-H-----------ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCce
Q 023975 120 --TERLN-Q-----------YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 185 (274)
Q Consensus 120 --~~~~~-~-----------~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~ 185 (274)
...+. . +++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||+++++++
T Consensus 200 ~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~--~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~ 277 (523)
T 1mo9_A 200 FDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFN--ATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSN 277 (523)
T ss_dssp EEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCE
T ss_pred eeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCE
Confidence 12222 1 234889999999998 5688999999999988888899999999999999999999999
Q ss_pred eeeeccCCCc----eeEECCCCc-EEeecEEEEcccCCCCch-hhcccccccccCCCCcEEeCCCccccCCCCeEEeccc
Q 023975 186 VNLDSVSEGS----DTYLTSTGD-TINADCHFLCTGKPVGSD-WLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDI 259 (274)
Q Consensus 186 v~~i~~~~~~----~~v~~~~g~-~~~~d~vv~a~G~~~~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~ 259 (274)
|++++.+++. +.+.+++|+ +++||.||+|+|..|+.+ ++...++ .++++|+|.||++++| +.|+|||+|||
T Consensus 278 V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl--~~~~~G~i~Vd~~~~t-~~~~IyA~GD~ 354 (523)
T 1mo9_A 278 VTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGL--DLGPKGEVLVNEYLQT-SVPNVYAVGDL 354 (523)
T ss_dssp EEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTC--CBCTTSCBCCCTTSBC-SSTTEEECGGG
T ss_pred EEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCC--ccCCCCCEEECCCCcc-CCCCEEEEeec
Confidence 9999875554 667888887 899999999999999988 6776665 5677899999999999 89999999999
Q ss_pred cCCCCCCC
Q 023975 260 TDIRVSAS 267 (274)
Q Consensus 260 ~~~~~~~~ 267 (274)
++.+...+
T Consensus 355 ~~~~~~~~ 362 (523)
T 1mo9_A 355 IGGPMEMF 362 (523)
T ss_dssp GCSSCSHH
T ss_pred CCCcccHH
Confidence 98765443
No 18
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.2e-35 Score=250.23 Aligned_cols=253 Identities=20% Similarity=0.244 Sum_probs=184.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeee-------------------cCCccc-cceeeec
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM-------------------VEPSFG-KRSVINH 70 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~-------------------~~~~~~-~~~~~~~ 70 (274)
+++||+|||||++|+++|+.|+ .|++|+||||.+.+|+.|...... ...... ......+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 3589999999999999999997 599999999988888654321100 000000 0000000
Q ss_pred c------------------cc--ccccEEEEEeeEEEecC--eEEeCCC--eEEecCEEEEccCCCCC-CChhH------
Q 023975 71 T------------------DY--LVNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDP-VPKTR------ 119 (274)
Q Consensus 71 ~------------------~~--~~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~li~a~G~~~~-~~~~~------ 119 (274)
. .. ..+++++......++.. .+...+| ..+.||++|+|||+.|. +|+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~~~~~ 183 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAFDEK 183 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCcccccCCe
Confidence 0 00 12456666666666555 4445555 57999999999998743 33321
Q ss_pred ----HHH----------HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCce
Q 023975 120 ----TER----------LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 185 (274)
Q Consensus 120 ----~~~----------~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~ 185 (274)
... +..+++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||+++.+++
T Consensus 184 ~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~ 261 (491)
T 3urh_A 184 TIVSSTGALALEKVPASMIVVGGGVIGLELGSVWA--RLGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAK 261 (491)
T ss_dssp SEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHH--HHTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEE
T ss_pred eEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHH--HcCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCe
Confidence 111 122455899999999998 4588999999999999988999999999999999999999999
Q ss_pred eeeeccCCCceeEECCC---C--cEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEecccc
Q 023975 186 VNLDSVSEGSDTYLTST---G--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 260 (274)
Q Consensus 186 v~~i~~~~~~~~v~~~~---g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~ 260 (274)
+.+++.+++...+.+.+ | +++++|.||+|+|+.|+.+++.....++.++++|++.||++++| +.|+|||+|||+
T Consensus 262 v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~ 340 (491)
T 3urh_A 262 VTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVV 340 (491)
T ss_dssp EEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGS
T ss_pred EEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecC
Confidence 99998777766666542 4 58999999999999999887533333446788999999999999 899999999999
Q ss_pred CCCCCCC
Q 023975 261 DIRVSAS 267 (274)
Q Consensus 261 ~~~~~~~ 267 (274)
+.|...+
T Consensus 341 ~~~~~~~ 347 (491)
T 3urh_A 341 RGPMLAH 347 (491)
T ss_dssp SSCCCHH
T ss_pred CCccchh
Confidence 7765443
No 19
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.7e-33 Score=232.91 Aligned_cols=245 Identities=21% Similarity=0.283 Sum_probs=184.0
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCCceeecccee-eecCCcc-ccceeeeccccc--cccEEEEEeeEE
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEYFEITWASLR-AMVEPSF-GKRSVINHTDYL--VNGRIVASPAIN 86 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~ 86 (274)
+||+|||||++|+++|+.|+ .|+ +|+|||+++...+....+. .++.... .........+++ .++++....+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~~ 81 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISDRMVS 81 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEECCCEEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEEEEEEE
Confidence 68999999999999999997 477 8999999987654432222 1221111 111111122222 245555555555
Q ss_pred Eec--CeEEeCCCeEEecCEEEEccCCCCCCChh---H------------HHHH----------HHccCCchhhhHHHHh
Q 023975 87 ITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKT---R------------TERL----------NQYQAGPTGVELAGEI 139 (274)
Q Consensus 87 ~~~--~~v~~~~~~~~~~~~li~a~G~~~~~~~~---~------------~~~~----------~~~~~g~~~~e~a~~l 139 (274)
++. +.+.+.++..+.||++++|||..|..|+. + ...+ ..+++|.+++|+|..+
T Consensus 82 id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l 161 (404)
T 3fg2_P 82 IDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATA 161 (404)
T ss_dssp EETTTTEEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHH
T ss_pred EECCCCEEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHH
Confidence 553 47888888899999999999987554331 1 1111 1134488999999999
Q ss_pred hhhCCCCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEECCCCcEEeecEEEEcccC
Q 023975 140 AVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 140 ~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~ 217 (274)
. ..+.+++++.+.+.+++ ..++.+.+.+.+.+++.||++++++.|++++.+++.+ .+.+++|++++||.||+|+|+
T Consensus 162 ~--~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 162 R--AKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp H--HTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred H--hCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 8 56889999999988876 4678899999999999999999999999998765544 588899999999999999999
Q ss_pred CCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 218 PVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
.|+.+++...++. .+ +| +.||++++| +.|+||++|||+..+.+
T Consensus 240 ~p~~~l~~~~gl~--~~-~G-i~vd~~~~t-~~~~iya~GD~a~~~~~ 282 (404)
T 3fg2_P 240 IPNVEIAAAAGLP--TA-AG-IIVDQQLLT-SDPHISAIGDCALFESV 282 (404)
T ss_dssp EECCHHHHHTTCC--BS-SS-EEECTTSBC-SSTTEEECGGGEEEEET
T ss_pred ccCHHHHHhCCCC--CC-CC-EEECCCccc-CCCCEEEeecceeecCc
Confidence 9999988877763 33 44 999999998 89999999999987764
No 20
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.6e-34 Score=246.03 Aligned_cols=253 Identities=19% Similarity=0.212 Sum_probs=185.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCC------ceeeccceee-------------------ecCCccc-c
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY------FEITWASLRA-------------------MVEPSFG-K 64 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~------~g~~~~~~~~-------------------~~~~~~~-~ 64 (274)
+++||+|||||++|+++|+.|++ |++|+|+||++. +|+.|..... +....+. .
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 45899999999999999999985 999999999873 3433211100 0000000 0
Q ss_pred ceeeecc------------------cc--ccccEEEEEeeEEEecC--eEEeCCC--eEEecCEEEEccCCCCCCChh--
Q 023975 65 RSVINHT------------------DY--LVNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDPVPKT-- 118 (274)
Q Consensus 65 ~~~~~~~------------------~~--~~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~li~a~G~~~~~~~~-- 118 (274)
.....+. .+ ..+++++......++.+ .+...++ ..+.||++|+|||+.|..|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~ 161 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAP 161 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCC
Confidence 0000000 00 12466666666666555 4555566 578999999999988654321
Q ss_pred -------HHHH----------HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEE
Q 023975 119 -------RTER----------LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVK 181 (274)
Q Consensus 119 -------~~~~----------~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~ 181 (274)
.... +..+++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||+++
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~ 239 (476)
T 3lad_A 162 VDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWA--RLGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKIL 239 (476)
T ss_dssp CCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred CCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHH--HcCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEE
Confidence 1111 222445899999999998 568999999999999998899999999999999999999
Q ss_pred cCceeeeeccCCCceeEECCCC---cEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEecc
Q 023975 182 LGERVNLDSVSEGSDTYLTSTG---DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGD 258 (274)
Q Consensus 182 ~~~~v~~i~~~~~~~~v~~~~g---~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd 258 (274)
+++.|++++.+++...+.+.++ +++++|.||+|+|+.|+.+++.....++.++++|++.||++++| +.|+||++||
T Consensus 240 ~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD 318 (476)
T 3lad_A 240 LGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGD 318 (476)
T ss_dssp ETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGG
T ss_pred ECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEc
Confidence 9999999988777777776654 67999999999999999886533444457788999999999998 8999999999
Q ss_pred ccCCCCCCC
Q 023975 259 ITDIRVSAS 267 (274)
Q Consensus 259 ~~~~~~~~~ 267 (274)
|++.|...+
T Consensus 319 ~~~~~~~~~ 327 (476)
T 3lad_A 319 VVRGAMLAH 327 (476)
T ss_dssp GSSSCCCHH
T ss_pred cCCCcccHH
Confidence 997766543
No 21
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1e-33 Score=243.32 Aligned_cols=242 Identities=20% Similarity=0.252 Sum_probs=171.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecccee--------------eec------C----Ccccccee
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR--------------AMV------E----PSFGKRSV 67 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~--------------~~~------~----~~~~~~~~ 67 (274)
++||+|||||++|+++|..|+ .|++|+|+|+++ +|+.|.... ... . ........
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 489999999999999999997 599999999985 554432100 000 0 00000000
Q ss_pred ee------------ccccc--cccEEEEEeeEEEecCeEEeCC-------------CeEEecCEEEEccCCCCCCChhH-
Q 023975 68 IN------------HTDYL--VNGRIVASPAINITENEVLTAE-------------GRRVVYDYLVIATGHKDPVPKTR- 119 (274)
Q Consensus 68 ~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~~~-------------~~~~~~~~li~a~G~~~~~~~~~- 119 (274)
.. ....+ .+++++......++.+.+...+ +..+.||++|+|||+.|..|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~G 160 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKG 160 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCCCC
Confidence 00 00111 2456665554444444444433 56789999999999987665432
Q ss_pred ------HHHHH---------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCc
Q 023975 120 ------TERLN---------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGE 184 (274)
Q Consensus 120 ------~~~~~---------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~ 184 (274)
...+. .+++|.+++|+|..+. ..+.+|+++.+.+.+++.+++.+.+.+.+.+++.||++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~ 238 (500)
T 1onf_A 161 IENTISSDEFFNIKESKKIGIVGSGYIAVELINVIK--RLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFA 238 (500)
T ss_dssp GGGCEEHHHHTTCCCCSEEEEECCSHHHHHHHHHHH--TTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSC
T ss_pred CCcccCHHHHhccCCCCeEEEECChHHHHHHHHHHH--HcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECC
Confidence 12221 2355899999999998 678999999999999988899999999999999999999999
Q ss_pred eeeeeccCCC-ceeEECCCCcE-EeecEEEEcccCCCCchhh--cccccccccCCCCcEEeCCCccccCCCCeEEecccc
Q 023975 185 RVNLDSVSEG-SDTYLTSTGDT-INADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDIT 260 (274)
Q Consensus 185 ~v~~i~~~~~-~~~v~~~~g~~-~~~d~vv~a~G~~~~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~ 260 (274)
.|++++.+++ ...+.+++|++ +++|.||+|+|..|+.+.+ ...++ .+ ++|++.||++++| +.|+|||+|||+
T Consensus 239 ~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~--~~-~~G~i~vd~~~~t-~~~~iya~GD~~ 314 (500)
T 1onf_A 239 DVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNV--ET-NNNYIVVDENQRT-SVNNIYAVGDCC 314 (500)
T ss_dssp CEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTC--CB-SSSCEEECTTCBC-SSSSEEECSTTE
T ss_pred EEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCc--cc-cCCEEEECCCccc-CCCCEEEEeccc
Confidence 9999986543 46788888987 9999999999999998644 44555 55 6899999999998 899999999999
Q ss_pred C
Q 023975 261 D 261 (274)
Q Consensus 261 ~ 261 (274)
.
T Consensus 315 ~ 315 (500)
T 1onf_A 315 M 315 (500)
T ss_dssp E
T ss_pred c
Confidence 4
No 22
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=2.8e-33 Score=239.33 Aligned_cols=248 Identities=25% Similarity=0.318 Sum_probs=174.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCceeeccceeeecCCccc-cc-e------eeeccccc---cccE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFG-KR-S------VINHTDYL---VNGR 78 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~g~~~~~~~~~~~~~~~-~~-~------~~~~~~~~---~~~~ 78 (274)
++||+|||||++|+++|+.|+ + |++|+|||+++.+++....+...+..... .. . .....+++ .+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 369999999999999999996 4 89999999999876443322222221111 01 0 11111111 2344
Q ss_pred EE-EEeeEEEec--CeEEeCC---Ce--EEecCEEEEccCCCCCCCh---hH------------HHHHH-----------
Q 023975 79 IV-ASPAINITE--NEVLTAE---GR--RVVYDYLVIATGHKDPVPK---TR------------TERLN----------- 124 (274)
Q Consensus 79 ~~-~~~~~~~~~--~~v~~~~---~~--~~~~~~li~a~G~~~~~~~---~~------------~~~~~----------- 124 (274)
+. ...+..++. +.+.+.+ +. .+.||++++|||..|..|+ .. ...+.
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v 162 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKA 162 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEE
T ss_pred EEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEE
Confidence 42 234444443 3444433 54 7899999999998755433 11 11222
Q ss_pred -HccCCchhhhHHHHhhhhCC-CCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECC
Q 023975 125 -QYQAGPTGVELAGEIAVDFP-EKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTS 201 (274)
Q Consensus 125 -~~~~g~~~~e~a~~l~~~~~-~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~ 201 (274)
.+++|.+++|+|..+. .. +.+++++.+.+.+++ ..++.+.+.+.+.+++.||+++++++|++++.+++.+.+.+.
T Consensus 163 vViGgG~~g~e~A~~l~--~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~ 240 (472)
T 3iwa_A 163 VIVGGGFIGLEMAVSLA--DMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVIT 240 (472)
T ss_dssp EEECCSHHHHHHHHHHH--HHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE
T ss_pred EEECCCHHHHHHHHHHH--HhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEe
Confidence 1344889999999988 45 889999999999888 888999999999999999999999999999876777778888
Q ss_pred CCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 202 TGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 202 ~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
+|+++++|.||+|+|+.|+.+++...++ .++++|++.||++++| +.|+||++|||+..+..
T Consensus 241 ~g~~i~aD~Vv~a~G~~p~~~l~~~~gl--~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~ 301 (472)
T 3iwa_A 241 DKRTLDADLVILAAGVSPNTQLARDAGL--ELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNL 301 (472)
T ss_dssp SSCEEECSEEEECSCEEECCHHHHHHTC--CBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBT
T ss_pred CCCEEEcCEEEECCCCCcCHHHHHhCCc--cCCCCCCEEECCCccc-CCCCEEEeccceecccc
Confidence 9999999999999999999888766555 6778899999999999 89999999999965543
No 23
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=6.7e-34 Score=243.30 Aligned_cols=250 Identities=19% Similarity=0.189 Sum_probs=184.1
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeee--------------------cCCc-------ccc
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM--------------------VEPS-------FGK 64 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~--------------------~~~~-------~~~ 64 (274)
++||+|||||++|+++|..|++ |++|+|||+++.+|+.|...... .... ...
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNL 85 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCH
Confidence 4899999999999999999974 99999999998777654221000 0000 000
Q ss_pred ceeee------------ccccc--cccEEEEEeeEEEecC--eEEeCC-C-eEEecCEEEEccCCCCCCChhH-------
Q 023975 65 RSVIN------------HTDYL--VNGRIVASPAINITEN--EVLTAE-G-RRVVYDYLVIATGHKDPVPKTR------- 119 (274)
Q Consensus 65 ~~~~~------------~~~~~--~~~~~~~~~~~~~~~~--~v~~~~-~-~~~~~~~li~a~G~~~~~~~~~------- 119 (274)
..... ..+++ .+++++......++.+ .+.+.+ + .++.||++|+|||+.|..|+..
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~v 165 (474)
T 1zmd_A 86 DKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTI 165 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCcE
Confidence 00000 01111 2456666665555555 344555 4 5799999999999886554321
Q ss_pred --HHH----------HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCcee
Q 023975 120 --TER----------LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERV 186 (274)
Q Consensus 120 --~~~----------~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v 186 (274)
... +..+++|.+++|+|..+. ..+.+|+++.+.+.+++ .+++.+.+.+.+.+++.||+++++++|
T Consensus 166 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v 243 (474)
T 1zmd_A 166 VSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQ--RLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKV 243 (474)
T ss_dssp ECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred EcHHHHhhccccCceEEEECCCHHHHHHHHHHH--HcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceE
Confidence 111 122344899999999998 56899999999999888 889999999999999999999999999
Q ss_pred eeeccCCCc-eeEE-----CCCCcEEeecEEEEcccCCCCchh--hcccccccccCCCCcEEeCCCccccCCCCeEEecc
Q 023975 187 NLDSVSEGS-DTYL-----TSTGDTINADCHFLCTGKPVGSDW--LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGD 258 (274)
Q Consensus 187 ~~i~~~~~~-~~v~-----~~~g~~~~~d~vv~a~G~~~~~~~--~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd 258 (274)
++++.+++. +.+. ..+++++++|.||+|+|..|+.++ +...++ .++++|+|.||++++| +.|+|||+||
T Consensus 244 ~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~--~~~~~G~i~vd~~~~t-~~~~IyA~GD 320 (474)
T 1zmd_A 244 TGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGI--ELDPRGRIPVNTRFQT-KIPNIYAIGD 320 (474)
T ss_dssp EEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTC--CCCTTSCCCCCTTCBC-SSTTEEECGG
T ss_pred EEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCC--ccCCCCCEEECcCCcc-CCCCEEEeee
Confidence 999876655 6665 356678999999999999999887 444444 5677899999999998 8999999999
Q ss_pred ccCCCCCCC
Q 023975 259 ITDIRVSAS 267 (274)
Q Consensus 259 ~~~~~~~~~ 267 (274)
|++.+...+
T Consensus 321 ~~~~~~~~~ 329 (474)
T 1zmd_A 321 VVAGPMLAH 329 (474)
T ss_dssp GSSSCCCHH
T ss_pred cCCCCccHH
Confidence 998765443
No 24
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=7.6e-34 Score=243.26 Aligned_cols=250 Identities=14% Similarity=0.165 Sum_probs=183.8
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee------------------ec--C-----Cccccce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA------------------MV--E-----PSFGKRS 66 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~------------------~~--~-----~~~~~~~ 66 (274)
++||+|||||++|+++|+.|+ .|++|+|+|+.+.+|+.+..... .. . .......
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 589999999999999999997 59999999998777644311100 00 0 0000000
Q ss_pred eee------------ccccc--cccEEEEEeeEEEecCeEEe--CCC------------eEEecCEEEEccCCCCCCCh-
Q 023975 67 VIN------------HTDYL--VNGRIVASPAINITENEVLT--AEG------------RRVVYDYLVIATGHKDPVPK- 117 (274)
Q Consensus 67 ~~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~--~~~------------~~~~~~~li~a~G~~~~~~~- 117 (274)
... ...++ .+++++.......+.+.+.. .++ .+++||++|+|||+.|..|+
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~~~ 165 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF 165 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCCCC
Confidence 000 00111 24666666655555553333 344 57899999999999866543
Q ss_pred hH-------HHHHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEE
Q 023975 118 TR-------TERLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDV 180 (274)
Q Consensus 118 ~~-------~~~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 180 (274)
.. ..... .+++|.+++|+|..+. ..+.+|+++.+.+.+++.+++.+.+.+.+.+++.||++
T Consensus 166 i~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~--~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i 243 (482)
T 1ojt_A 166 IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYS--TLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNI 243 (482)
T ss_dssp CCCCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHH--HHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEE
T ss_pred CCccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHH--HcCCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEE
Confidence 11 12221 1344899999999998 45889999999999999889999999999999999999
Q ss_pred EcCceeeeeccCCCceeEECCC----CcEEeecEEEEcccCCCCchhh--cccccccccCCCCcEEeCCCccccCCCCeE
Q 023975 181 KLGERVNLDSVSEGSDTYLTST----GDTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIF 254 (274)
Q Consensus 181 ~~~~~v~~i~~~~~~~~v~~~~----g~~~~~d~vv~a~G~~~~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~ 254 (274)
++++.|.+++.+++...+++.+ |+++++|.||+|+|..|+.+++ ...++ .++++|+|.||++++| +.|+||
T Consensus 244 ~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl--~~~~~G~i~vd~~~~t-~~~~Iy 320 (482)
T 1ojt_A 244 MVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGV--AVTDRGFIEVDKQMRT-NVPHIY 320 (482)
T ss_dssp ECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTC--CCCTTSCCCCCTTSBC-SSTTEE
T ss_pred EECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCc--eeCCCCCEeeCCCccc-CCCCEE
Confidence 9999999998766666777766 7789999999999999999875 44444 6677899999999998 899999
Q ss_pred EeccccCCCCCCC
Q 023975 255 AIGDITDIRVSAS 267 (274)
Q Consensus 255 ~~Gd~~~~~~~~~ 267 (274)
|+|||++.+...+
T Consensus 321 A~GD~~~~~~l~~ 333 (482)
T 1ojt_A 321 AIGDIVGQPMLAH 333 (482)
T ss_dssp ECGGGTCSSCCHH
T ss_pred EEEcccCCCccHH
Confidence 9999998765443
No 25
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2.2e-33 Score=239.20 Aligned_cols=248 Identities=18% Similarity=0.212 Sum_probs=184.8
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee-----e-----------------cC--Ccccccee
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA-----M-----------------VE--PSFGKRSV 67 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~-----~-----------------~~--~~~~~~~~ 67 (274)
++||+|||||++|+++|..|+ .|++|+|+|+++ +|+.|..... + +. ........
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 489999999999999999997 499999999987 5544311000 0 00 00000000
Q ss_pred ee------------ccccc--cccEEEEEeeEEEecCeEEeCCCeEEecCEEEEccCCCCCCCh-hH-------HHHH--
Q 023975 68 IN------------HTDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPK-TR-------TERL-- 123 (274)
Q Consensus 68 ~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~li~a~G~~~~~~~-~~-------~~~~-- 123 (274)
.. ...++ .+++++......++.+.+.+. +.++.||++|+|||+.|..|+ ++ ...+
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~~~v~~~~~~~~ 163 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG-GERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALK 163 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TEEEEEEEEEECCCEEECCBTTBCCSSSEECHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCCCcEEcHHHHHh
Confidence 00 01111 256777666666666677776 678999999999999876553 21 1111
Q ss_pred ---------HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCC
Q 023975 124 ---------NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEG 194 (274)
Q Consensus 124 ---------~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~ 194 (274)
..+++|.+++|+|..+. ..+.+++++.+.+.+++..++.+.+.+.+.+++.||+++.+++|++++.+++
T Consensus 164 l~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~ 241 (464)
T 2eq6_A 164 VEEGLPKRLLVIGGGAVGLELGQVYR--RLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKD 241 (464)
T ss_dssp GGGCCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT
T ss_pred hhhhcCCEEEEECCCHHHHHHHHHHH--HCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCC
Confidence 12344899999999998 5689999999999988888899999999999999999999999999987666
Q ss_pred ceeEECC-C--Cc--EEeecEEEEcccCCCCchhh--cccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCCC
Q 023975 195 SDTYLTS-T--GD--TINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSAS 267 (274)
Q Consensus 195 ~~~v~~~-~--g~--~~~~d~vv~a~G~~~~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~~ 267 (274)
.+.+.+. + |+ ++++|.||+|+|..|+.+++ ...++ .++++|++.||++++| +.|+|||+|||++.+...+
T Consensus 242 ~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~--~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~l~~ 318 (464)
T 2eq6_A 242 GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGV--KVDERGFIRVNARMET-SVPGVYAIGDAARPPLLAH 318 (464)
T ss_dssp EEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTC--CBCTTSCBCCCTTCBC-SSTTEEECGGGTCSSCCHH
T ss_pred EEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCc--eecCCCCEEECCCccc-CCCCEEEEeccCCCcccHH
Confidence 6667765 6 76 89999999999999998864 33444 5677899999999998 8999999999998765443
No 26
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.6e-34 Score=244.87 Aligned_cols=253 Identities=20% Similarity=0.200 Sum_probs=184.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeec---------------------C-----Ccccc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMV---------------------E-----PSFGK 64 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~---------------------~-----~~~~~ 64 (274)
.++||+|||||++|+++|..|++ |++|+|+|+.+.+|+.|....... . .....
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 45899999999999999999975 999999999987776542210000 0 00000
Q ss_pred ceeeec------------cccc--cccEEEEEeeEEEecCe--EEeCCC--eEEecCEEEEccCCCCCCChhH-------
Q 023975 65 RSVINH------------TDYL--VNGRIVASPAINITENE--VLTAEG--RRVVYDYLVIATGHKDPVPKTR------- 119 (274)
Q Consensus 65 ~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~--v~~~~~--~~~~~~~li~a~G~~~~~~~~~------- 119 (274)
.....+ ..++ .+++++......++.+. +.+.+| ..+.||++|+|||..|..|+..
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~v 164 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKI 164 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCcccE
Confidence 000000 0111 14566665555555553 334456 6899999999999986655421
Q ss_pred --HHHHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceee
Q 023975 120 --TERLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVN 187 (274)
Q Consensus 120 --~~~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~ 187 (274)
...+. .+++|.+++|+|..+. ..+.+++++.+.+.+++..++.+.+.+.+.+++.||++++++.|.
T Consensus 165 ~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~ 242 (470)
T 1dxl_A 165 VSSTGALALSEIPKKLVVIGAGYIGLEMGSVWG--RIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVV 242 (470)
T ss_dssp ECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHH--HHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEE
T ss_pred EeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHH--HcCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEE
Confidence 11221 2345899999999998 458899999999998888889999999999999999999999999
Q ss_pred eeccCCCceeEECC---CC--cEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCC
Q 023975 188 LDSVSEGSDTYLTS---TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 262 (274)
Q Consensus 188 ~i~~~~~~~~v~~~---~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~ 262 (274)
+++.+++.+.+.+. +| +++++|.||+|+|..|+.+++....+++.++++|++.||++++| +.|+|||+|||++.
T Consensus 243 ~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~ 321 (470)
T 1dxl_A 243 GVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIPG 321 (470)
T ss_dssp EEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSSS
T ss_pred EEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCCC
Confidence 99877666666654 44 68999999999999999888432233346677899999999998 89999999999987
Q ss_pred CCCCC
Q 023975 263 RVSAS 267 (274)
Q Consensus 263 ~~~~~ 267 (274)
+...+
T Consensus 322 ~~~~~ 326 (470)
T 1dxl_A 322 PMLAH 326 (470)
T ss_dssp CCCHH
T ss_pred CccHH
Confidence 65443
No 27
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.4e-33 Score=241.63 Aligned_cols=251 Identities=20% Similarity=0.259 Sum_probs=182.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee--------------ec----CCcc-------ccce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA--------------MV----EPSF-------GKRS 66 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~--------------~~----~~~~-------~~~~ 66 (274)
++||+|||||++|+++|+.|+ .|++|+|+|++ .+|+.|..... .. ...+ ....
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 98 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRV 98 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 589999999999999999998 49999999987 45544321100 00 0000 0000
Q ss_pred eeec------------ccc--ccccEEEEEeeEEEecC--eEEeCCCeEEecCEEEEccCCCCCCC---hhH-------H
Q 023975 67 VINH------------TDY--LVNGRIVASPAINITEN--EVLTAEGRRVVYDYLVIATGHKDPVP---KTR-------T 120 (274)
Q Consensus 67 ~~~~------------~~~--~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~li~a~G~~~~~~---~~~-------~ 120 (274)
...+ ... ..+++++.......+.. .+. .++.++.||++|+|||+.|..| +++ .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~~~~~~ 177 (478)
T 3dk9_A 99 IKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGASLGITS 177 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGGGSBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCceeEch
Confidence 0000 000 12456666665555433 444 4677899999999999886655 322 2
Q ss_pred HHHHH----------ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeec
Q 023975 121 ERLNQ----------YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDS 190 (274)
Q Consensus 121 ~~~~~----------~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 190 (274)
..+.. +++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||+++.++.+++++
T Consensus 178 ~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 255 (478)
T 3dk9_A 178 DGFFQLEELPGRSVIVGAGYIAVEMAGILS--ALGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVK 255 (478)
T ss_dssp HHHTTCCSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEE
T ss_pred HHhhchhhcCccEEEECCCHHHHHHHHHHH--HcCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 22222 345899999999998 568999999999998898999999999999999999999999999998
Q ss_pred cCCCc--eeEECCC-------CcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccC
Q 023975 191 VSEGS--DTYLTST-------GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITD 261 (274)
Q Consensus 191 ~~~~~--~~v~~~~-------g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~ 261 (274)
.+++. +.+.+.+ |+++++|.||+|+|+.|+.+.+....+++.++++|++.||++++| +.|+|||+|||++
T Consensus 256 ~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 334 (478)
T 3dk9_A 256 KTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCG 334 (478)
T ss_dssp ECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGC
T ss_pred EcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCC
Confidence 66554 5566654 257999999999999999885433334446788999999999998 8999999999997
Q ss_pred CCCCCCC
Q 023975 262 IRVSASM 268 (274)
Q Consensus 262 ~~~~~~~ 268 (274)
.|...+.
T Consensus 335 ~~~~~~~ 341 (478)
T 3dk9_A 335 KALLTPV 341 (478)
T ss_dssp SSCCHHH
T ss_pred CCccHhH
Confidence 7665443
No 28
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=9.9e-33 Score=234.70 Aligned_cols=244 Identities=21% Similarity=0.324 Sum_probs=178.3
Q ss_pred CcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCceeeccceeeecCCcc---cc-ceeeeccccc--cccEEEEE-e
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSF---GK-RSVINHTDYL--VNGRIVAS-P 83 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~g~~~~~~~~~~~~~~---~~-~~~~~~~~~~--~~~~~~~~-~ 83 (274)
+||+|||||++|+++|..|+ . |++|+|+|+++.+++....+........ .. .......+++ .++++... .
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 58999999999999999997 3 9999999999876543332211111111 01 1111111111 14555333 3
Q ss_pred eEEEe--cCeEEeCC-----CeEEecCEEEEccCCCCCCChhH---------------HHHH----------HHccCCch
Q 023975 84 AINIT--ENEVLTAE-----GRRVVYDYLVIATGHKDPVPKTR---------------TERL----------NQYQAGPT 131 (274)
Q Consensus 84 ~~~~~--~~~v~~~~-----~~~~~~~~li~a~G~~~~~~~~~---------------~~~~----------~~~~~g~~ 131 (274)
+..++ .+.+.+.+ +..+.||++++|||+.|..|+++ ...+ ..+++|.+
T Consensus 81 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~ 160 (452)
T 2cdu_A 81 VTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYI 160 (452)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHH
T ss_pred EEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHH
Confidence 44444 44555532 46799999999999876544321 1111 11345899
Q ss_pred hhhHHHHhhhhCCCCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCcee-EECCCCcEEeec
Q 023975 132 GVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINAD 209 (274)
Q Consensus 132 ~~e~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d 209 (274)
++|+|..+. ..+.+++++.+.+.+++ .+++.+.+.+.+.+++.||+++++++|++++.+++.+. +.+ +|+++++|
T Consensus 161 g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D 237 (452)
T 2cdu_A 161 GAELAEAYS--NQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSD 237 (452)
T ss_dssp HHHHHHHHH--TTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEES
T ss_pred HHHHHHHHH--hcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECC
Confidence 999999998 66899999999999888 68889999999999999999999999999986444443 455 77899999
Q ss_pred EEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 210 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 210 ~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
.||+|+|..|+.+++... + .++++|++.||++++| +.|+|||+|||++.+.
T Consensus 238 ~vv~a~G~~p~~~ll~~~-l--~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~ 288 (452)
T 2cdu_A 238 IAILCIGFRPNTELLKGK-V--AMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHY 288 (452)
T ss_dssp EEEECCCEEECCGGGTTT-S--CBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEE
T ss_pred EEEECcCCCCCHHHHHHh-h--hcCCCCCEEECCCcCc-CCCCEEEcceEEEecc
Confidence 999999999999887654 4 5678899999999999 8999999999998653
No 29
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=6.4e-33 Score=242.29 Aligned_cols=247 Identities=19% Similarity=0.319 Sum_probs=183.0
Q ss_pred CcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCceeeccceeeecCCccc--cceeeeccccc---cccEEE-EEee
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTDYL---VNGRIV-ASPA 84 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~-~~~~ 84 (274)
+||+|||||++|+++|+.|+ . +++|+|||+++.+++....+......... ........+.+ .++++. ...+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 69999999999999999997 3 89999999999877544333322222111 11111111111 134442 3344
Q ss_pred EEEec--CeEEeCC---C--eEEecCEEEEccCCCCCCCh---hH------------HHHH------------HHccCCc
Q 023975 85 INITE--NEVLTAE---G--RRVVYDYLVIATGHKDPVPK---TR------------TERL------------NQYQAGP 130 (274)
Q Consensus 85 ~~~~~--~~v~~~~---~--~~~~~~~li~a~G~~~~~~~---~~------------~~~~------------~~~~~g~ 130 (274)
..++. +.+.+.+ + .++.||++|+|||+.|..|+ .+ ...+ ..+++|.
T Consensus 82 ~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ 161 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGF 161 (565)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSH
T ss_pred EEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCH
Confidence 44543 3444432 4 37899999999998755433 21 1111 1234599
Q ss_pred hhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeecc-------------------
Q 023975 131 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSV------------------- 191 (274)
Q Consensus 131 ~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~------------------- 191 (274)
+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||++++++.+.+++.
T Consensus 162 ~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 239 (565)
T 3ntd_A 162 IGLEMMESLH--HLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQH 239 (565)
T ss_dssp HHHHHHHHHH--HTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCC
T ss_pred HHHHHHHHHH--hcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccccccccccccccc
Confidence 9999999998 5689999999999988888899999999999999999999999999976
Q ss_pred CCCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 192 SEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 192 ~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
.++.+.+.+.+|++++||.||+|+|+.|+.+++...++ .++++|++.||++++| +.|+|||+|||+..+..
T Consensus 240 ~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 310 (565)
T 3ntd_A 240 IKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGL--AIGELGGIKVNAMMQT-SDPAIYAVGDAVEEQDF 310 (565)
T ss_dssp TTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTC--CBCTTSSBCCCTTCBC-SSTTEEECGGGBCEEBT
T ss_pred CCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCc--ccCCCCCEEECCCccc-CCCCEEEeeeeEeeccc
Confidence 34566777888999999999999999999888766555 6778899999999999 89999999999965543
No 30
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.1e-34 Score=242.80 Aligned_cols=250 Identities=21% Similarity=0.229 Sum_probs=181.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee------------------ec--C-----Cccccce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA------------------MV--E-----PSFGKRS 66 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~------------------~~--~-----~~~~~~~ 66 (274)
++||+|||||++|+++|..|+ .|++|+|+|+. .+|+.|..... .. . .......
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 479999999999999999997 49999999998 55544311000 00 0 0000000
Q ss_pred eeec------------cccc--cccEEEEEeeEEEecC--eEEeCCC-eEEecCEEEEccCCCCCCChhH--------HH
Q 023975 67 VINH------------TDYL--VNGRIVASPAINITEN--EVLTAEG-RRVVYDYLVIATGHKDPVPKTR--------TE 121 (274)
Q Consensus 67 ~~~~------------~~~~--~~~~~~~~~~~~~~~~--~v~~~~~-~~~~~~~li~a~G~~~~~~~~~--------~~ 121 (274)
.... .+++ .+++++......++.+ .+.+.++ .++.||++|+|||+.|..|+.. ..
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~v~~~~ 161 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDST 161 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccceEecHH
Confidence 0000 0111 2466666665555555 4455566 6799999999999986654321 11
Q ss_pred HHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeecc
Q 023975 122 RLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSV 191 (274)
Q Consensus 122 ~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 191 (274)
... .+++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||++++++.|++++.
T Consensus 162 ~~~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 162 GALNLGEVPKSLVVIGGGYIGIELGTAYA--NFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEE 239 (455)
T ss_dssp HHHTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEE
T ss_pred HHhccccCCCeEEEECCCHHHHHHHHHHH--HcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEE
Confidence 221 1344899999999998 5689999999999988888889999999999999999999999999987
Q ss_pred CCCceeEECC---CCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCC
Q 023975 192 SEGSDTYLTS---TGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 192 ~~~~~~v~~~---~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
+++.+.+.+. +++++++|.||+|+|..|+.+++....+++.++++|++.||++++| +.|+|||+|||++.+...
T Consensus 240 ~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~~~ 316 (455)
T 1ebd_A 240 REDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPGPALA 316 (455)
T ss_dssp ETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSSCCCH
T ss_pred eCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCCcccH
Confidence 6655666654 4568999999999999999887432233336677899999999998 899999999999876544
No 31
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.6e-32 Score=233.20 Aligned_cols=246 Identities=22% Similarity=0.318 Sum_probs=176.5
Q ss_pred CCcEEEEcCChHHHHHHHHhhc---CCcEEEEcCCCCceeeccceeeecCCcccc-ceeeeccccc---cccEEEEE-ee
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGK-RSVINHTDYL---VNGRIVAS-PA 84 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~---g~~v~vie~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~-~~ 84 (274)
++||+|||||++|+++|+.|++ +++|+|||+++.+++.+..+.......... .......+.+ .++++... .+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 4799999999999999999973 889999999998765443333222211111 1111111211 24555544 44
Q ss_pred EEEecC--eEEeCCC-eEEecCEEEEccCCCCCCCh---hH------------HH------------HHHHccCCchhhh
Q 023975 85 INITEN--EVLTAEG-RRVVYDYLVIATGHKDPVPK---TR------------TE------------RLNQYQAGPTGVE 134 (274)
Q Consensus 85 ~~~~~~--~v~~~~~-~~~~~~~li~a~G~~~~~~~---~~------------~~------------~~~~~~~g~~~~e 134 (274)
..++.. .+.++++ .++.||++++|||+.|..|+ .+ .. ++..+++|.+++|
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E 162 (449)
T 3kd9_A 83 IEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIE 162 (449)
T ss_dssp EEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHH
T ss_pred EEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHH
Confidence 455433 5666666 48999999999998755443 11 11 1122345899999
Q ss_pred HHHHhhhhCCCCeEEEEeCCCccCCc-CChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEE
Q 023975 135 LAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFL 213 (274)
Q Consensus 135 ~a~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~ 213 (274)
+|..+. ..+.+++++.+.+.+++. +++.+.+.+.+.+++. ++++.++.+.+++.++ .+...+.+++++++|.||+
T Consensus 163 ~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~ 238 (449)
T 3kd9_A 163 MAEAFA--AQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVIL 238 (449)
T ss_dssp HHHHHH--HTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEE
T ss_pred HHHHHH--hCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEE
Confidence 999998 568999999999998886 8899999999999989 9999999999998655 4433455778899999999
Q ss_pred cccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 214 CTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 214 a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
|+|..|+.+++...++ .++++|++.||++++| +.|+||++|||+..+..
T Consensus 239 a~G~~p~~~l~~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 287 (449)
T 3kd9_A 239 ATGIKPNIELAKQLGV--RIGETGAIWTNEKMQT-SVENVYAAGDVAETRHV 287 (449)
T ss_dssp CSCEEECCHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBCEEBT
T ss_pred eeCCccCHHHHHhCCc--cCCCCCCEEECCCCcc-CCCCEEEeeeeeeeccc
Confidence 9999999888876665 5678899999999999 89999999999975543
No 32
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.1e-33 Score=227.84 Aligned_cols=239 Identities=18% Similarity=0.212 Sum_probs=170.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCc-ccccee----eeccccccccEEEEEeeEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPS-FGKRSV----INHTDYLVNGRIVASPAIN 86 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~ 86 (274)
++||+|||||++|+++|+.|+ +|++|+|+|+++..+..+.....+.... .....+ ......+.++.++...+..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 81 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTD 81 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEE
Confidence 489999999999999999997 5999999999875543322221111111 000000 0111112245665555555
Q ss_pred EecC----eEEeCCCeEEecCEEEEccCCCCCCC---hhHH-------------------HHHHHccCCchhhhHHHHhh
Q 023975 87 ITEN----EVLTAEGRRVVYDYLVIATGHKDPVP---KTRT-------------------ERLNQYQAGPTGVELAGEIA 140 (274)
Q Consensus 87 ~~~~----~v~~~~~~~~~~~~li~a~G~~~~~~---~~~~-------------------~~~~~~~~g~~~~e~a~~l~ 140 (274)
++.. .+.++++..+.||++|+|+|..|..| +... +.+..+++|.+++|+|..+.
T Consensus 82 i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~ 161 (297)
T 3fbs_A 82 AKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLP 161 (297)
T ss_dssp EEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGG
T ss_pred EEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhh
Confidence 5432 67778888899999999999985443 3211 11112345899999999998
Q ss_pred hhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCC
Q 023975 141 VDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 141 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
. .+ +++++.+.+. .+...+.+.+++.||+++. +++.++..++ .+.+.+|+++++|.||+|+|+.|+
T Consensus 162 ~--~g-~v~~v~~~~~-------~~~~~~~~~l~~~gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~p~ 227 (297)
T 3fbs_A 162 D--WG-ETTFFTNGIV-------EPDADQHALLAARGVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLRIT 227 (297)
T ss_dssp G--TS-EEEEECTTTC-------CCCHHHHHHHHHTTCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEECC
T ss_pred h--cC-cEEEEECCCC-------CCCHHHHHHHHHCCcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcccC
Confidence 4 36 9999987764 2445677888999999995 8899987543 788889999999999999999999
Q ss_pred chhhcccccccccCCCC-cEEeCCCccccCCCCeEEeccccCCCCCC
Q 023975 221 SDWLKDTILKDSLDTHG-MLMVDENLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 221 ~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
.+++...++.....++| ++.+|++++| +.|+||++|||++.|...
T Consensus 228 ~~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~~~~~~~~ 273 (297)
T 3fbs_A 228 VDWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDVARPAGSV 273 (297)
T ss_dssp CSCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGGGCTTCCH
T ss_pred chhHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeecCCchHHH
Confidence 88887766643322467 8999999998 899999999999875543
No 33
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.1e-33 Score=241.27 Aligned_cols=246 Identities=20% Similarity=0.210 Sum_probs=182.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeec--------------------CCcccccee----
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV--------------------EPSFGKRSV---- 67 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~--------------------~~~~~~~~~---- 67 (274)
++||+|||||++|+++|+.|+ .|++|+|+||.+.+|+.|....... ...+.....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 489999999999999999997 5999999999888887654211100 000000000
Q ss_pred ---------eecccc--ccccEEEEEeeEEEecC--eEEeCCCeE--EecCEEEEccCCCCCCChhH-------HHHHH-
Q 023975 68 ---------INHTDY--LVNGRIVASPAINITEN--EVLTAEGRR--VVYDYLVIATGHKDPVPKTR-------TERLN- 124 (274)
Q Consensus 68 ---------~~~~~~--~~~~~~~~~~~~~~~~~--~v~~~~~~~--~~~~~li~a~G~~~~~~~~~-------~~~~~- 124 (274)
.....+ ..+++++...+..++.+ .+.++++.. +.||++|+|||+.|..|+.+ ...+.
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~t~~~~~~ 163 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLTSDDIFG 163 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGGGSBCHHHHHS
T ss_pred HhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCccceEeHHHHHH
Confidence 000111 12566666666666655 556667777 99999999999876554321 12222
Q ss_pred -------------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcC-ChhHHHHHHHHHHhCCcEEEcCceeeeec
Q 023975 125 -------------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI-GPKAGDKTRDWLISKKVDVKLGERVNLDS 190 (274)
Q Consensus 125 -------------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 190 (274)
.+++|.+++|+|..+. ..+.+++++.+.+.+++.. ++.+.+.+.+.++ |+++.++.|++++
T Consensus 164 ~~~~l~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~ 238 (466)
T 3l8k_A 164 YKTSFRKLPQDMVIIGAGYIGLEIASIFR--LMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVK 238 (466)
T ss_dssp TTCSCCSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEE
T ss_pred HHHHHhhCCCeEEEECCCHHHHHHHHHHH--HcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEE
Confidence 1234889999999998 5689999999999988877 8888888888776 9999999999998
Q ss_pred cCC-CceeEECC--CCc--EEeecEEEEcccCCCCchh-hcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 191 VSE-GSDTYLTS--TGD--TINADCHFLCTGKPVGSDW-LKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 191 ~~~-~~~~v~~~--~g~--~~~~d~vv~a~G~~~~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
.++ +.+.+.+. +|+ ++++|.||+|+|+.|+.++ +...++ .++++| +.||++++| +.|+|||+|||++.|.
T Consensus 239 ~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl--~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~~~ 314 (466)
T 3l8k_A 239 KIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGL--SISKTG-IVVDETMKT-NIPNVFATGDANGLAP 314 (466)
T ss_dssp EEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTC--CBCSSS-BCCCTTCBC-SSTTEEECGGGTCSCC
T ss_pred EcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCc--eeCCCC-EeECCCccC-CCCCEEEEEecCCCCc
Confidence 766 66777776 665 8999999999999999883 444444 677888 999999999 8999999999998765
Q ss_pred CCC
Q 023975 265 SAS 267 (274)
Q Consensus 265 ~~~ 267 (274)
...
T Consensus 315 ~~~ 317 (466)
T 3l8k_A 315 YYH 317 (466)
T ss_dssp SHH
T ss_pred cHh
Confidence 543
No 34
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.1e-31 Score=225.23 Aligned_cols=242 Identities=22% Similarity=0.278 Sum_probs=180.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CC--cEEEEcCCCCceeecccee-eecCCccccceeeeccccccccEEEEEe-eEE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEYFEITWASLR-AMVEPSFGKRSVINHTDYLVNGRIVASP-AIN 86 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~--~v~vie~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 86 (274)
+++||+|||||++|+++|..|++ |+ +|+|+|+++.+++....+. .++.............. ..+++++... +..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~v~~ 84 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKR-APEVEWLLGVTAQS 84 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTT-SCSCEEEETCCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHH-HCCCEEEcCCEEEE
Confidence 45899999999999999999974 76 5999999987654322221 11111111111111000 1246666554 455
Q ss_pred Eec--CeEEeCCCeEEecCEEEEccCCCCCCChh-H-----------HHH---HH----------HccCCchhhhHHHHh
Q 023975 87 ITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKT-R-----------TER---LN----------QYQAGPTGVELAGEI 139 (274)
Q Consensus 87 ~~~--~~v~~~~~~~~~~~~li~a~G~~~~~~~~-~-----------~~~---~~----------~~~~g~~~~e~a~~l 139 (274)
++. +.+.++++..+.||++|+|||+.|..|+. + ... +. .+++|.+++|+|..+
T Consensus 85 i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l 164 (408)
T 2gqw_A 85 FDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATA 164 (408)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHH
T ss_pred EECCCCEEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHH
Confidence 553 47888888889999999999988665443 1 111 21 123488999999999
Q ss_pred hhhCCCCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCC
Q 023975 140 AVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 140 ~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
. ..+.+++++.+.+.+++ ..++.+.+.+.+.+++.||+++++++|++++ + + .+++.+|++++||.||+|+|..
T Consensus 165 ~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 165 R--TAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp H--HTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCEE
T ss_pred H--hCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCCC
Confidence 8 56889999999998887 4788899999999999999999999999998 3 3 6778889999999999999999
Q ss_pred CCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 219 VGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
|+.+++...++. .+ +| +.||++++| +.|+|||+|||+..+.+
T Consensus 239 p~~~l~~~~gl~--~~-~g-i~Vd~~~~t-~~~~IyA~GD~~~~~~~ 280 (408)
T 2gqw_A 239 ANDALARAAGLA--CD-DG-IFVDAYGRT-TCPDVYALGDVTRQRNP 280 (408)
T ss_dssp ECCHHHHHHTCC--BS-SS-EECCTTCBC-SSTTEEECGGGEEEEET
T ss_pred ccHHHHHhCCCC--CC-CC-EEECCCCcc-CCCCEEEEEEEEEecCc
Confidence 998888776663 33 45 999999998 89999999999987653
No 35
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=1.8e-32 Score=221.55 Aligned_cols=238 Identities=16% Similarity=0.184 Sum_probs=161.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCc-cccc----eeeeccccccccEEEEEeeE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPS-FGKR----SVINHTDYLVNGRIVASPAI 85 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~ 85 (274)
++|||+||||||||++||++|+ .|++|+|||+....|........+.... .... ........+....+......
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVV 84 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEE
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEE
Confidence 3589999999999999999997 5999999999765442211111111110 0000 00001111223444444444
Q ss_pred EEec-----CeEEeCCCeEEecCEEEEccCCCCCCChhHHHHH----------------------HHccCCc-hhhhHHH
Q 023975 86 NITE-----NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTERL----------------------NQYQAGP-TGVELAG 137 (274)
Q Consensus 86 ~~~~-----~~v~~~~~~~~~~~~li~a~G~~~~~~~~~~~~~----------------------~~~~~g~-~~~e~a~ 137 (274)
.... ..+.+.++.++.||++|+|||+.|..|+++.... ..+++|. .+++++.
T Consensus 85 ~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~ 164 (304)
T 4fk1_A 85 MITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTK 164 (304)
T ss_dssp EEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHH
T ss_pred EeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHH
Confidence 3322 1677888999999999999999866555332111 0112243 4567777
Q ss_pred HhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCc-eeEECCCCcEEeecEEEEccc
Q 023975 138 EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTG 216 (274)
Q Consensus 138 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G 216 (274)
.+. ..+.+++++.+.+.+ .+.+.+.+++.|+.++.+. +..+..+++. ..+.+.+|+++++|.+|+++|
T Consensus 165 ~~~--~~~~~v~i~~~~~~~--------~~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g 233 (304)
T 4fk1_A 165 LVY--NWSTDLVIATNGNEL--------SQTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLRIERAGGFIVPT 233 (304)
T ss_dssp HHT--TTCSCEEEECSSCCC--------CHHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCEECCCEEEECCE
T ss_pred HHH--hCCceEEEEeccccc--------hhhhhhhhhccceeEeeee-EEEeecCCCeeeeeeccccceeeecceeeeec
Confidence 776 568889888776543 3466778889999998765 6666665544 458899999999999998888
Q ss_pred CCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCC
Q 023975 217 KPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~ 263 (274)
..|+..++...++ .++++|+|.||++++| +.|+|||+|||++.+
T Consensus 234 ~~~~~~~~~~~g~--~~~~~G~I~vd~~~~T-s~p~IyA~GDv~~~~ 277 (304)
T 4fk1_A 234 FFRPNQFIEQLGC--ELQSNGTFVIDDFGRT-SEKNIYLAGETTTQG 277 (304)
T ss_dssp EECSSCHHHHTTC--CCCTTSSSCSSTTCBC-SSTTEEECSHHHHTS
T ss_pred cccCChhhhhcCe--EECCCCCEEECcCCcc-CCCCEEEEeccCCCc
Confidence 7666677776665 6788999999999999 899999999999754
No 36
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.3e-33 Score=240.33 Aligned_cols=251 Identities=20% Similarity=0.226 Sum_probs=184.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeee---------------------c---CCcccccee
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM---------------------V---EPSFGKRSV 67 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~---------------------~---~~~~~~~~~ 67 (274)
++||+|||||++|+++|..|+ .|++|+|+|+++.+|+.|...... + .........
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPAL 80 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHH
Confidence 379999999999999999997 499999999998777654211000 0 000000000
Q ss_pred eec------------cccc--cccEEEEEeeEEEecCeEEeC-CCeEEecCEEEEccCCCCCCChh---H------HHHH
Q 023975 68 INH------------TDYL--VNGRIVASPAINITENEVLTA-EGRRVVYDYLVIATGHKDPVPKT---R------TERL 123 (274)
Q Consensus 68 ~~~------------~~~~--~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~li~a~G~~~~~~~~---~------~~~~ 123 (274)
..+ ..++ .+++++......++.+.+... ++.++.||++|+|||+.|..|+. . ...+
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~~ 160 (455)
T 2yqu_A 81 MAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEA 160 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCSSSEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCcCcEechHHh
Confidence 000 0111 245666655555555544443 56789999999999987655431 1 1122
Q ss_pred H----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCC
Q 023975 124 N----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSE 193 (274)
Q Consensus 124 ~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~ 193 (274)
. .+++|.+++|+|..+. ..+.+++++.+.+.+++..++.+.+.+.+.+++.|++++++++|++++.++
T Consensus 161 ~~~~~~~~~vvIiGgG~~g~e~A~~l~--~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~ 238 (455)
T 2yqu_A 161 LSFPEVPKRLIVVGGGVIGLELGVVWH--RLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA 238 (455)
T ss_dssp TCCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET
T ss_pred hccccCCCeEEEECCCHHHHHHHHHHH--HcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC
Confidence 1 2445899999999998 568899999999998888888999999999999999999999999998776
Q ss_pred CceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCC
Q 023975 194 GSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 194 ~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
+.+.+.+++|+++++|.||+|+|..|+.+++.....++.++++|++.||+++++ +.|+||++|||++.+...
T Consensus 239 ~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~~~~~ 310 (455)
T 2yqu_A 239 KGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRGPMLA 310 (455)
T ss_dssp TEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSSCCCH
T ss_pred CEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCCccCH
Confidence 667777778889999999999999998877422223335667789999999998 899999999999876544
No 37
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=6.9e-32 Score=227.86 Aligned_cols=247 Identities=21% Similarity=0.298 Sum_probs=181.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCCceeeccceee-ecCCccc-cceeeeccccc--cccEEEEE-e
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEYFEITWASLRA-MVEPSFG-KRSVINHTDYL--VNGRIVAS-P 83 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~--~~~~~~~~-~ 83 (274)
+.+||+|||||++|+++|..|+ .|+ +|+|+|+.+.+.+....+.. ++..... ........+++ .+++++.. .
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 82 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQ 82 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCE
Confidence 3589999999999999999997 477 79999998765433221111 1111100 11111111222 24555443 2
Q ss_pred eEEEec--CeEEeCCCeEEecCEEEEccCCCCCCChhH---HHH---------------HHH----------ccCCchhh
Q 023975 84 AINITE--NEVLTAEGRRVVYDYLVIATGHKDPVPKTR---TER---------------LNQ----------YQAGPTGV 133 (274)
Q Consensus 84 ~~~~~~--~~v~~~~~~~~~~~~li~a~G~~~~~~~~~---~~~---------------~~~----------~~~g~~~~ 133 (274)
+..++. +.+.++++..+.||++|+|||..|..|+.+ ..+ +.. +++|.+++
T Consensus 83 v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~ 162 (431)
T 1q1r_A 83 VTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGL 162 (431)
T ss_dssp EEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHH
T ss_pred EEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHH
Confidence 344543 478888888899999999999987665432 112 111 23488999
Q ss_pred hHHHHhhhhCCCCeEEEEeCCCccCCc-CChhHHHHHHHHHHhCCcEEEcCceeeeecc--CCCce-eEECCCCcEEeec
Q 023975 134 ELAGEIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSV--SEGSD-TYLTSTGDTINAD 209 (274)
Q Consensus 134 e~a~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~--~~~~~-~v~~~~g~~~~~d 209 (274)
|+|..+. ..+.+++++.+.+.+++. .++.+.+.+.+.+++.||++++++.|++++. +++.+ .+.+.+|+++++|
T Consensus 163 E~A~~l~--~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D 240 (431)
T 1q1r_A 163 EVAATAI--KANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPAD 240 (431)
T ss_dssp HHHHHHH--HTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECS
T ss_pred HHHHHHH--hCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcC
Confidence 9999998 568899999999888774 7788889999999999999999999999986 44444 6788899999999
Q ss_pred EEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 210 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 210 ~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
.||+|+|..|+.+++...++. ++ + ++.||++++| +.|+||++|||+..+.+
T Consensus 241 ~Vv~a~G~~p~~~l~~~~gl~--~~-~-gi~Vd~~~~t-s~~~IyA~GD~~~~~~~ 291 (431)
T 1q1r_A 241 LVIAGIGLIPNCELASAAGLQ--VD-N-GIVINEHMQT-SDPLIMAVGDCARFHSQ 291 (431)
T ss_dssp EEEECCCEEECCHHHHHTTCC--BS-S-SEECCTTSBC-SSTTEEECGGGEEEEET
T ss_pred EEEECCCCCcCcchhhccCCC--CC-C-CEEECCCccc-CCCCEEEEEeEEEEccc
Confidence 999999999998888877763 33 4 4999999999 89999999999987654
No 38
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=2.6e-33 Score=239.04 Aligned_cols=249 Identities=18% Similarity=0.182 Sum_probs=180.8
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeecccee---------------ee---cC-Ccc------ccce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLR---------------AM---VE-PSF------GKRS 66 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~---------------~~---~~-~~~------~~~~ 66 (274)
++||+|||||++|+++|..|++ |++|+|+|+. .+|+.+.... .. .. ... ....
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 3799999999999999999974 9999999998 4543321100 00 00 000 0000
Q ss_pred eee------------ccccc--cccEEEEEeeEEEecC--eEEeCCC--eEEecCEEEEccCCCCCCChh---H-----H
Q 023975 67 VIN------------HTDYL--VNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDPVPKT---R-----T 120 (274)
Q Consensus 67 ~~~------------~~~~~--~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~li~a~G~~~~~~~~---~-----~ 120 (274)
... ..+++ .+++++......++.+ .+.+.+| .++.||++|+|+|+.|..|+. . .
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~~~~~ 161 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTY 161 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTTEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCceEEec
Confidence 000 00111 2456655554444444 4555667 689999999999988654431 1 1
Q ss_pred HHHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeec
Q 023975 121 ERLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDS 190 (274)
Q Consensus 121 ~~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 190 (274)
.... .+++|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||++++++.|++++
T Consensus 162 ~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (464)
T 2a8x_A 162 EEQILSRELPKSIIIAGAGAIGMEFGYVLK--NYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIA 239 (464)
T ss_dssp HHHHTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEE
T ss_pred HHHhhccccCCeEEEECCcHHHHHHHHHHH--HcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEE
Confidence 1221 2345899999999998 568999999999999988899999999999999999999999999998
Q ss_pred cCCCceeEECC-CC--cEEeecEEEEcccCCCCchhh--cccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 191 VSEGSDTYLTS-TG--DTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 191 ~~~~~~~v~~~-~g--~~~~~d~vv~a~G~~~~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
.+++.+.+.+. +| +++++|.||+|+|..|+.+++ ...++ .++++|+|.||++++| +.|+|||+|||++.+..
T Consensus 240 ~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 316 (464)
T 2a8x_A 240 DGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGV--ALTDRKAIGVDDYMRT-NVGHIYAIGDVNGLLQL 316 (464)
T ss_dssp ECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTC--CBCTTSSBCCCTTSBC-SSTTEEECGGGGCSSCS
T ss_pred EcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCC--ccCCCCCEeECcCCcc-CCCCEEEeECcCCCccC
Confidence 76666666654 56 689999999999999998874 44444 5677899999999998 89999999999987654
Q ss_pred CC
Q 023975 266 AS 267 (274)
Q Consensus 266 ~~ 267 (274)
.+
T Consensus 317 ~~ 318 (464)
T 2a8x_A 317 AH 318 (464)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 39
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=5.8e-33 Score=238.56 Aligned_cols=253 Identities=20% Similarity=0.175 Sum_probs=188.7
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCC--------Cceeecccee--------------eec---CCccc---
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE--------YFEITWASLR--------------AMV---EPSFG--- 63 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~--------~~g~~~~~~~--------------~~~---~~~~~--- 63 (274)
.||++||||||+|+++|..+++ |.+|+|||+.. .+|++.-... ... ...+-
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4899999999999999999975 99999999754 2454311000 000 00000
Q ss_pred cceeeecc------------------ccc--cccEEEEEeeEEEecCeEEe------CCCeEEecCEEEEccCCCCCCCh
Q 023975 64 KRSVINHT------------------DYL--VNGRIVASPAINITENEVLT------AEGRRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 64 ~~~~~~~~------------------~~~--~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~~li~a~G~~~~~~~ 117 (274)
......+. ..+ .+++++.......+.+.+.. .+.+.+.++++|+|||+.|.+|+
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~ 201 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPD 201 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCS
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCC
Confidence 00000000 001 24677777777777775543 23467899999999999988774
Q ss_pred h---------HHHH----------HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCc
Q 023975 118 T---------RTER----------LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV 178 (274)
Q Consensus 118 ~---------~~~~----------~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 178 (274)
. .... +..+++|++|+|+|..+. ..|.+|+++.+ +.+++.+++++...+.+.+++.|+
T Consensus 202 ~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~--~lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi 278 (542)
T 4b1b_A 202 DVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLN--SLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGV 278 (542)
T ss_dssp SSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHH--HHTCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTC
T ss_pred cccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHH--hcCCeEEEecc-cccccccchhHHHHHHHHHHhhcc
Confidence 1 1122 223455999999999998 67999999987 467888999999999999999999
Q ss_pred EEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcE-EeCCCccccCCCCeEEec
Q 023975 179 DVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGML-MVDENLRVKGQKNIFAIG 257 (274)
Q Consensus 179 ~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~i~~~G 257 (274)
.++++..+..++..++.+.+.+.+++++.+|.|++|+|..||.+.+..+..++.++.++++ .+|++++| +.|+|||+|
T Consensus 279 ~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiG 357 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVG 357 (542)
T ss_dssp EEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECT
T ss_pred eeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccc-cCCCeEEec
Confidence 9999999999998888888999999999999999999999999988877766667766665 77888998 899999999
Q ss_pred cccC-CCCCCCCC
Q 023975 258 DITD-IRVSASMI 269 (274)
Q Consensus 258 d~~~-~~~~~~~~ 269 (274)
||++ .|.+++.+
T Consensus 358 Dv~~~~p~La~~A 370 (542)
T 4b1b_A 358 DVAENVPELAPVA 370 (542)
T ss_dssp TSBTTCCCCHHHH
T ss_pred cccCCchhHHHHH
Confidence 9985 46665544
No 40
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.8e-32 Score=223.61 Aligned_cols=236 Identities=25% Similarity=0.358 Sum_probs=174.1
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeecCCcccccee-eecccccc--ccEEEEE-eeEEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSV-INHTDYLV--NGRIVAS-PAINI 87 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~-~~~~~ 87 (274)
..|++|||||++|+++|..|++ | +|+|+|+++.+.+....+...+......... ....+++. +++++.. .+..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~i 86 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLI 86 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEE
Confidence 3699999999999999999985 8 9999999987653322222222111111111 11112222 4566554 34555
Q ss_pred ecC--eEEeCCCeEEecCEEEEccCCCCCCChhH-------------HHHH----------HHccCCchhhhHHHHhhhh
Q 023975 88 TEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTR-------------TERL----------NQYQAGPTGVELAGEIAVD 142 (274)
Q Consensus 88 ~~~--~v~~~~~~~~~~~~li~a~G~~~~~~~~~-------------~~~~----------~~~~~g~~~~e~a~~l~~~ 142 (274)
+.. .+. .++.++.||++|+|||+.|..|+.+ ...+ ..+++|.+++|+|..+.
T Consensus 87 d~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~-- 163 (367)
T 1xhc_A 87 DRGRKVVI-TEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLA-- 163 (367)
T ss_dssp ETTTTEEE-ESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHH--
T ss_pred ECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHH--
Confidence 533 565 5677899999999999886554311 1111 12345999999999998
Q ss_pred CCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCch
Q 023975 143 FPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 143 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
..+.+++++.+.+.+++ +++.+.+.+.+.+++.||+++++++|++++. ..+.+++|+ +++|.||+|+|..|+.+
T Consensus 164 ~~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~----~~v~~~~g~-i~~D~vi~a~G~~p~~~ 237 (367)
T 1xhc_A 164 EAGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANE----EGVLTNSGF-IEGKVKICAIGIVPNVD 237 (367)
T ss_dssp HTTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS----SEEEETTEE-EECSCEEEECCEEECCH
T ss_pred hCCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe----eEEEECCCE-EEcCEEEECcCCCcCHH
Confidence 56889999999998888 8888999999999999999999999999972 246777887 99999999999999988
Q ss_pred hhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCC
Q 023975 223 WLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~ 263 (274)
+++..++ ..+ + ++.||++++| +.|+|||+|||+..+
T Consensus 238 ll~~~gl--~~~-~-gi~Vd~~~~t-~~~~IyA~GD~a~~~ 273 (367)
T 1xhc_A 238 LARRSGI--HTG-R-GILIDDNFRT-SAKDVYAIGDCAEYS 273 (367)
T ss_dssp HHHHTTC--CBS-S-SEECCTTSBC-SSTTEEECGGGEEBT
T ss_pred HHHhCCC--CCC-C-CEEECCCccc-CCCCEEEeEeeeecC
Confidence 8777666 333 4 4999999998 899999999998653
No 41
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.98 E-value=2.1e-32 Score=234.41 Aligned_cols=250 Identities=17% Similarity=0.084 Sum_probs=177.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC---------Cceeeccceee---------------------e-cC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE---------YFEITWASLRA---------------------M-VE 59 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~---------~~g~~~~~~~~---------------------~-~~ 59 (274)
.++||+|||||++|+++|+.|+ .|++|+||||.+ .+|+.|..... + ..
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 4689999999999999999997 599999999521 25554422100 0 00
Q ss_pred ----Cccccceeeecc------------cc--ccccEEEEEeeEEEecC--eEEeCCC-eEEecCEEEEccCCCCCCChh
Q 023975 60 ----PSFGKRSVINHT------------DY--LVNGRIVASPAINITEN--EVLTAEG-RRVVYDYLVIATGHKDPVPKT 118 (274)
Q Consensus 60 ----~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~--~v~~~~~-~~~~~~~li~a~G~~~~~~~~ 118 (274)
..........+. .. ..+++++.......+.+ .+.+.++ ..+.||++|+|||+.|..|++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~p~i 167 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDI 167 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECCCSS
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCCCCC
Confidence 000000000000 00 12456666666556655 3444555 479999999999988765543
Q ss_pred HHH--------HHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEE
Q 023975 119 RTE--------RLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDV 180 (274)
Q Consensus 119 ~~~--------~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 180 (274)
+.. .+. .+++|.+++|+|..+. ..+.+++++.+ ..+++.+++.+.+.+.+.+++.||++
T Consensus 168 ~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i 244 (483)
T 3dgh_A 168 PGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLK--GLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPF 244 (483)
T ss_dssp TTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHH--HTTCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCE
T ss_pred CCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHH--HcCCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEE
Confidence 221 111 1334899999999998 56899999988 45677888999999999999999999
Q ss_pred EcCceeeeeccCCC-ceeEECCCCc-----EEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeE
Q 023975 181 KLGERVNLDSVSEG-SDTYLTSTGD-----TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIF 254 (274)
Q Consensus 181 ~~~~~v~~i~~~~~-~~~v~~~~g~-----~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~ 254 (274)
++++.+.+++.+++ .+.+.+.+++ ++++|.||+|+|..|+.+++.....++.+++ |++.||++++| +.|+||
T Consensus 245 ~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~Iy 322 (483)
T 3dgh_A 245 LRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIY 322 (483)
T ss_dssp EETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEE
T ss_pred EeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCEE
Confidence 99999999986544 4566665543 7999999999999999888743334446667 99999999998 899999
Q ss_pred Eecccc-CCCCCC
Q 023975 255 AIGDIT-DIRVSA 266 (274)
Q Consensus 255 ~~Gd~~-~~~~~~ 266 (274)
|+|||+ +.|...
T Consensus 323 A~GD~~~~~~~~~ 335 (483)
T 3dgh_A 323 AVGDIIYGKPELT 335 (483)
T ss_dssp ECSTTBTTSCCCH
T ss_pred EEEcccCCCCccH
Confidence 999998 545443
No 42
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.98 E-value=3e-32 Score=238.88 Aligned_cols=247 Identities=21% Similarity=0.346 Sum_probs=182.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCceeeccceeeecCCccc--cceeeecc-ccc--cccEEE-EE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHT-DYL--VNGRIV-AS 82 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~-~~~--~~~~~~-~~ 82 (274)
+++||+|||||++|+++|+.|+ . |++|+|||+++.+++....+......... ........ .+. .++.+. ..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 4589999999999999999997 3 89999999999877544333222222111 11111111 111 134442 23
Q ss_pred eeEEEec--CeEEe---CCCe--EEecCEEEEccCCCCCCC---hh-H------------HHH------------HHHcc
Q 023975 83 PAINITE--NEVLT---AEGR--RVVYDYLVIATGHKDPVP---KT-R------------TER------------LNQYQ 127 (274)
Q Consensus 83 ~~~~~~~--~~v~~---~~~~--~~~~~~li~a~G~~~~~~---~~-~------------~~~------------~~~~~ 127 (274)
.+..++. +.+.+ .++. .+.||++|+|||+.|..| +. + ... +..++
T Consensus 115 ~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViG 194 (588)
T 3ics_A 115 EVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIG 194 (588)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred EEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEEC
Confidence 4444443 34444 2454 789999999999875443 32 1 111 11234
Q ss_pred CCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEe
Q 023975 128 AGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTIN 207 (274)
Q Consensus 128 ~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ 207 (274)
+|.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||++++++.|++++.+++ .+.+.+|++++
T Consensus 195 gG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~ 270 (588)
T 3ics_A 195 GGFIGVEMVENLR--ERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSVIQ 270 (588)
T ss_dssp CSHHHHHHHHHHH--HTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCEEE
T ss_pred CCHHHHHHHHHHH--hCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCEEE
Confidence 5899999999998 5689999999999988888899999999999999999999999999976544 47778888999
Q ss_pred ecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 208 ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 208 ~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
+|.||+|+|+.|+.+++...++ .++++|++.||++++| +.|+|||+|||+..+..
T Consensus 271 ~D~Vi~a~G~~p~~~~l~~~g~--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~ 325 (588)
T 3ics_A 271 TDMLILAIGVQPESSLAKGAGL--ALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDF 325 (588)
T ss_dssp CSEEEECSCEEECCHHHHHTTC--CBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBT
T ss_pred cCEEEEccCCCCChHHHHhcCc--eEcCCCCEEECCcccc-CCCCEEEeeeeeecccc
Confidence 9999999999999988876665 5678899999999999 89999999999965543
No 43
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.98 E-value=2.9e-33 Score=239.67 Aligned_cols=249 Identities=18% Similarity=0.208 Sum_probs=180.9
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeecccee---------------eec----CCccc--cceeeec
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLR---------------AMV----EPSFG--KRSVINH 70 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~---------------~~~----~~~~~--~~~~~~~ 70 (274)
++||+|||||++|+++|..|++ |++|+|+|+++.+|+.|.... .+. ..... ......+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4899999999999999999974 999999999887775542210 000 00000 0000000
Q ss_pred ------------------cccc--cccEEEEEeeEEEecC--eEEeCCC--eE------EecCEEEEccCCCCC-CChhH
Q 023975 71 ------------------TDYL--VNGRIVASPAINITEN--EVLTAEG--RR------VVYDYLVIATGHKDP-VPKTR 119 (274)
Q Consensus 71 ------------------~~~~--~~~~~~~~~~~~~~~~--~v~~~~~--~~------~~~~~li~a~G~~~~-~~~~~ 119 (274)
..++ .+++++.......+.+ .+.+.+| .. +.||++|+|||+.|. +|+..
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~g~~ 164 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIE 164 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCCCCC
Confidence 0011 2456655554444444 3444455 46 999999999998753 33211
Q ss_pred --------HHHHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEE
Q 023975 120 --------TERLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVK 181 (274)
Q Consensus 120 --------~~~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~ 181 (274)
..... .+++|.+++|+|..+. ..+.+|+++.+.+.+++.+++.+.+.+.+.+++.||+++
T Consensus 165 ~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 242 (478)
T 1v59_A 165 IDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYS--RLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFK 242 (478)
T ss_dssp CCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHH--HcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 11221 2455999999999998 568999999999999888889999999999999999999
Q ss_pred cCceeeeecc--CCCceeEECC-----CCcEEeecEEEEcccCCCCch--hhcccccccccCCCCcEEeCCCccccCCCC
Q 023975 182 LGERVNLDSV--SEGSDTYLTS-----TGDTINADCHFLCTGKPVGSD--WLKDTILKDSLDTHGMLMVDENLRVKGQKN 252 (274)
Q Consensus 182 ~~~~v~~i~~--~~~~~~v~~~-----~g~~~~~d~vv~a~G~~~~~~--~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 252 (274)
++++|++++. +++...+.+. +++++++|.||+|+|..|+.+ ++...++ .++++|+|.||++++| +.|+
T Consensus 243 ~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~--~~~~~G~i~vd~~~~t-~~~~ 319 (478)
T 1v59_A 243 LSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGL--EVDKRGRLVIDDQFNS-KFPH 319 (478)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTC--CBCTTSCBCCCTTSBC-SSTT
T ss_pred eCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCc--eeCCCCCEeECcCCcc-CCCC
Confidence 9999999986 4555566654 356899999999999999987 5665555 5677899999999998 8999
Q ss_pred eEEeccccCCCCCC
Q 023975 253 IFAIGDITDIRVSA 266 (274)
Q Consensus 253 i~~~Gd~~~~~~~~ 266 (274)
|||+|||++.+...
T Consensus 320 IyA~GD~~~~~~~~ 333 (478)
T 1v59_A 320 IKVVGDVTFGPMLA 333 (478)
T ss_dssp EEECGGGSSSCCCH
T ss_pred EEEeeccCCCcccH
Confidence 99999999876544
No 44
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.98 E-value=2.7e-32 Score=235.25 Aligned_cols=251 Identities=16% Similarity=0.128 Sum_probs=175.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC--------Cceeeccceeee----------------------cC-
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE--------YFEITWASLRAM----------------------VE- 59 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~--------~~g~~~~~~~~~----------------------~~- 59 (274)
..+||+||||||+|+++|..|+ .|++|+|||+.+ .+|+.+...... ..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 3589999999999999999997 599999999964 455543221000 00
Q ss_pred ---Cccccceeeecc------------cc--ccccEEEEEeeEEEecC--eEEeCCCe--EEecCEEEEccCCCCCCChh
Q 023975 60 ---PSFGKRSVINHT------------DY--LVNGRIVASPAINITEN--EVLTAEGR--RVVYDYLVIATGHKDPVPKT 118 (274)
Q Consensus 60 ---~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~--~v~~~~~~--~~~~~~li~a~G~~~~~~~~ 118 (274)
..........+. .. ..+++++......++.+ .+...+|. ++.||++|+|||+.|..|++
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~p~i 190 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGI 190 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECCCCC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCCCCC
Confidence 000000000000 00 12466776666666666 34444453 79999999999998766543
Q ss_pred HH--------HHHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEE
Q 023975 119 RT--------ERLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDV 180 (274)
Q Consensus 119 ~~--------~~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 180 (274)
+. ..+. .+++|.+++|+|..+. ..+.+|+++.+. .+++.+++.+.+.+.+.+++.||++
T Consensus 191 ~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~--~~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV~v 267 (519)
T 3qfa_A 191 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLA--GIGLDVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIKF 267 (519)
T ss_dssp TTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHH--HTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHH--HcCCeEEEEecc-cccccCCHHHHHHHHHHHHHCCCEE
Confidence 32 1111 1334899999999998 568899999884 6778888999999999999999999
Q ss_pred EcCceeeeeccCC----CceeE--ECCCC-c--EEeecEEEEcccCCCCchhhcccccccccC-CCCcEEeCCCccccCC
Q 023975 181 KLGERVNLDSVSE----GSDTY--LTSTG-D--TINADCHFLCTGKPVGSDWLKDTILKDSLD-THGMLMVDENLRVKGQ 250 (274)
Q Consensus 181 ~~~~~v~~i~~~~----~~~~v--~~~~g-~--~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~ 250 (274)
++++.+.+++... +.+.+ ...+| + ++++|.|++|+|..|+.+++.....++.++ .+|++.||++++| +.
T Consensus 268 ~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~ 346 (519)
T 3qfa_A 268 IRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NV 346 (519)
T ss_dssp EESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SS
T ss_pred EeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CC
Confidence 9998887776432 23333 33455 2 578999999999999988754333444676 5799999999998 89
Q ss_pred CCeEEecccc-CCCCCC
Q 023975 251 KNIFAIGDIT-DIRVSA 266 (274)
Q Consensus 251 ~~i~~~Gd~~-~~~~~~ 266 (274)
|+|||+|||+ +.+...
T Consensus 347 ~~IyA~GD~~~g~~~~~ 363 (519)
T 3qfa_A 347 PYIYAIGDILEDKVELT 363 (519)
T ss_dssp TTEEECGGGBSSSCCCH
T ss_pred CCEEEEEeccCCCCccH
Confidence 9999999998 555443
No 45
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.98 E-value=9.2e-33 Score=229.47 Aligned_cols=234 Identities=22% Similarity=0.324 Sum_probs=178.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccc-cceeeecccccc--ccEEEEE-eeEE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFG-KRSVINHTDYLV--NGRIVAS-PAIN 86 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~-~~~~ 86 (274)
+..+|+|||||+||++||..|+ ++.+|+|||+++.+++....+...+..... .+......+++. ++++... .+..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 3479999999999999999996 489999999999877644444333322211 122222222222 5566543 4555
Q ss_pred Ee--cCeEEeCCCeEEecCEEEEccCCCCCCChhH-------------HH----------HHHHccCCchhhhHHHHhhh
Q 023975 87 IT--ENEVLTAEGRRVVYDYLVIATGHKDPVPKTR-------------TE----------RLNQYQAGPTGVELAGEIAV 141 (274)
Q Consensus 87 ~~--~~~v~~~~~~~~~~~~li~a~G~~~~~~~~~-------------~~----------~~~~~~~g~~~~e~a~~l~~ 141 (274)
++ .+.+.++++.++.||++|+|||+.|..|+.+ .. ++..+++|.+|+|+|..+.
T Consensus 88 id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~- 166 (385)
T 3klj_A 88 IDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAII- 166 (385)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHH-
T ss_pred EECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHH-
Confidence 55 3488889999999999999999886544311 11 1222455999999999998
Q ss_pred hCCCCeEEEEeCCCccCCc-CChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCC
Q 023975 142 DFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
..+.+++++.+.+.+++. +++.+.+.+.+.+++.||+++.++.+.++ |+++++|.||+|+|+.|+
T Consensus 167 -~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 167 -DSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp -HHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEEC
T ss_pred -hCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCcccC
Confidence 458899999999998875 78889999999999999999999988776 567999999999999999
Q ss_pred chhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 221 SDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
.+++...++. .+ + ++.||++++| +.|+|||+|||+..+..
T Consensus 233 ~~~~~~~gl~--~~-~-gi~vd~~~~t-~~~~IyA~GD~a~~~~~ 272 (385)
T 3klj_A 233 LDFIKDTEIA--SK-R-GILVNDHMET-SIKDIYACGDVAEFYGK 272 (385)
T ss_dssp CGGGTTSCCC--BS-S-SEEECTTCBC-SSTTEEECGGGEEETTB
T ss_pred hhhhhhcCCC--cC-C-CEEECCCccc-CCCCEEEEEeeEecCCC
Confidence 9998877763 32 4 4999999999 89999999999986543
No 46
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.98 E-value=2.4e-32 Score=234.31 Aligned_cols=250 Identities=17% Similarity=0.118 Sum_probs=178.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcC--------CCCceeeccceeee--------------------c----
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDP--------KEYFEITWASLRAM--------------------V---- 58 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~--------~~~~g~~~~~~~~~--------------------~---- 58 (274)
+++||+|||||++|+++|..|+ .|++|+|+|| ...+|+.|...... .
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 4589999999999999999997 5999999998 44566544221000 0
Q ss_pred --CCccccceeeecc------------cc--ccccEEEEEeeEEEecC--eEEeCCC--eEEecCEEEEccCCCCCCCh-
Q 023975 59 --EPSFGKRSVINHT------------DY--LVNGRIVASPAINITEN--EVLTAEG--RRVVYDYLVIATGHKDPVPK- 117 (274)
Q Consensus 59 --~~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~--~v~~~~~--~~~~~~~li~a~G~~~~~~~- 117 (274)
...........+. .. ..+++++......++.+ .+...++ .++.||++|+|||+.|..|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~ 164 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQ 164 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSS
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCC
Confidence 0000000000000 00 12466666666666655 3444555 57899999999999866544
Q ss_pred hHH--------HHHHH----------ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcE
Q 023975 118 TRT--------ERLNQ----------YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVD 179 (274)
Q Consensus 118 ~~~--------~~~~~----------~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 179 (274)
++. ..+.. +++|.+++|+|..+. ..+.+|+++.+. .+++.+++.+.+.+.+.+++.||+
T Consensus 165 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~--~~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~ 241 (488)
T 3dgz_A 165 VKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLT--GIGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQ 241 (488)
T ss_dssp CBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHH--HTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHH--HcCCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCE
Confidence 321 12211 334899999999998 568999999886 467778899999999999999999
Q ss_pred EEcCceeeeeccC-CCceeEECCC---Cc--EEeecEEEEcccCCCCchhhcccccccccC-CCCcEEeCCCccccCCCC
Q 023975 180 VKLGERVNLDSVS-EGSDTYLTST---GD--TINADCHFLCTGKPVGSDWLKDTILKDSLD-THGMLMVDENLRVKGQKN 252 (274)
Q Consensus 180 i~~~~~v~~i~~~-~~~~~v~~~~---g~--~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~ 252 (274)
+++++.+.+++.. ++.+.+.+.+ |+ ++++|.||+|+|+.|+.+++.....++.++ ++|++.||++++| +.|+
T Consensus 242 ~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~ 320 (488)
T 3dgz_A 242 FLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPH 320 (488)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTT
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCC
Confidence 9999999999764 3445565543 54 579999999999999998864444445677 7899999999998 8999
Q ss_pred eEEecccc-CCCCC
Q 023975 253 IFAIGDIT-DIRVS 265 (274)
Q Consensus 253 i~~~Gd~~-~~~~~ 265 (274)
|||+|||+ +.|..
T Consensus 321 IyA~GD~~~~~~~~ 334 (488)
T 3dgz_A 321 IYAIGDVAEGRPEL 334 (488)
T ss_dssp EEECGGGBTTCCCC
T ss_pred EEEeEEecCCCCcc
Confidence 99999997 44443
No 47
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.98 E-value=5.2e-32 Score=232.25 Aligned_cols=245 Identities=19% Similarity=0.288 Sum_probs=177.0
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-C---CcEEEEcCCCCceeeccceeeecCCcc--ccceeeeccccc--cccEEEE-Ee
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-S---ADVTLIDPKEYFEITWASLRAMVEPSF--GKRSVINHTDYL--VNGRIVA-SP 83 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g---~~v~vie~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~-~~ 83 (274)
++||+|||||++|+++|..|++ | ++|+|||+++.+++.+..+........ .........+.+ .++++.. ..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 4899999999999999999974 6 999999999876544332221111110 011111111111 1345432 22
Q ss_pred eEEEe--cCeEEeC-C--CeEEecCEEEEccCCCCCCCh---hH-----------------------HHHHHH-------
Q 023975 84 AINIT--ENEVLTA-E--GRRVVYDYLVIATGHKDPVPK---TR-----------------------TERLNQ------- 125 (274)
Q Consensus 84 ~~~~~--~~~v~~~-~--~~~~~~~~li~a~G~~~~~~~---~~-----------------------~~~~~~------- 125 (274)
+..++ .+.+.+. + +.++.||++|+|||+.|..|+ .. ...+..
T Consensus 115 v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 194 (490)
T 2bc0_A 115 VQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDI 194 (490)
T ss_dssp EEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTC
T ss_pred EEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCC
Confidence 34444 3455554 4 357899999999998755442 21 112211
Q ss_pred -----ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEE
Q 023975 126 -----YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYL 199 (274)
Q Consensus 126 -----~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~ 199 (274)
+++|.+++|+|..+. ..+.+|+++.+.+.+++ .+++.+.+.+.+.+++.||++++++.|++++.++....+.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~ 272 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQ--RKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKII 272 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHH--HTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHH--HCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEE
Confidence 234899999999998 56899999999999888 6888999999999999999999999999998643222355
Q ss_pred CCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 200 TSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 200 ~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
+ +|+++++|.||+|+|+.|+.+++... + .++++|++.||++++| +.|+|||+|||++.+.
T Consensus 273 ~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l--~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~ 332 (490)
T 2bc0_A 273 T-DKNEYDVDMVILAVGFRPNTTLGNGK-I--DLFRNGAFLVNKRQET-SIPGVYAIGDCATIYD 332 (490)
T ss_dssp E-SSCEEECSEEEECCCEEECCGGGTTC-S--CBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEE
T ss_pred E-CCcEEECCEEEECCCCCcChHHHHhh-h--ccCCCCCEEECCCccc-CCCCEEEeeeeEEecc
Confidence 5 67789999999999999999887654 4 5678899999999999 8999999999998653
No 48
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=1.9e-31 Score=222.26 Aligned_cols=243 Identities=20% Similarity=0.258 Sum_probs=176.0
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-C--CcEEEEcCCCCceeeccceeeecCCccc-cceeeec-cccc--cccEEEEE-ee
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEITWASLRAMVEPSFG-KRSVINH-TDYL--VNGRIVAS-PA 84 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g--~~v~vie~~~~~g~~~~~~~~~~~~~~~-~~~~~~~-~~~~--~~~~~~~~-~~ 84 (274)
++||+|||||++|+++|..|++ | .+|+++|++....+....+......... ....... ..+. .+++++.. .+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 5899999999999999999974 6 6799999986322111112111111111 1111111 1111 24555532 33
Q ss_pred EEEe--cCeEEeCCCeEEecCEEEEccCCCCCCChhH---------------HHHH----------HHccCCchhhhHHH
Q 023975 85 INIT--ENEVLTAEGRRVVYDYLVIATGHKDPVPKTR---------------TERL----------NQYQAGPTGVELAG 137 (274)
Q Consensus 85 ~~~~--~~~v~~~~~~~~~~~~li~a~G~~~~~~~~~---------------~~~~----------~~~~~g~~~~e~a~ 137 (274)
..++ .+.+.+++ ..+.||++++|||+.|..|+.+ ...+ ..+++|.+++|+|.
T Consensus 84 ~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~ 162 (384)
T 2v3a_A 84 TGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFAN 162 (384)
T ss_dssp CEEEGGGTEEEETT-EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHH
T ss_pred EEEECCCCEEEECC-cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHH
Confidence 4444 35676654 5799999999999886554311 1111 11345899999999
Q ss_pred HhhhhCCCCeEEEEeCCCccCCc-CChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEccc
Q 023975 138 EIAVDFPEKKVTLVHKGSRLLEF-IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTG 216 (274)
Q Consensus 138 ~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G 216 (274)
.+. ..+.+++++.+.+.+++. .++.+.+.+.+.+++.|++++++++|++++.+++.+.+.+++|+++++|.||+|+|
T Consensus 163 ~l~--~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G 240 (384)
T 2v3a_A 163 DLS--SGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVG 240 (384)
T ss_dssp HHH--HTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred HHH--hCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcC
Confidence 998 568999999999888775 47788899999999999999999999999876667788888999999999999999
Q ss_pred CCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCC
Q 023975 217 KPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~ 263 (274)
..|+.++++..++ .++ +| +.||++++| +.|+|||+|||+..+
T Consensus 241 ~~p~~~l~~~~g~--~~~-~g-i~vd~~~~t-~~~~IyA~GD~~~~~ 282 (384)
T 2v3a_A 241 LRPRTELAFAAGL--AVN-RG-IVVDRSLRT-SHANIYALGDCAEVD 282 (384)
T ss_dssp EEECCHHHHHTTC--CBS-SS-EEECTTCBC-SSTTEEECGGGEEET
T ss_pred CCcCHHHHHHCCC--CCC-CC-EEECCCCCC-CCCCEEEeeeeeeEC
Confidence 9999888777666 444 56 999999998 899999999999644
No 49
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.97 E-value=6.3e-32 Score=219.27 Aligned_cols=243 Identities=19% Similarity=0.176 Sum_probs=158.2
Q ss_pred CCCCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecC-Cccccc---ee-eeccccc--cccEEE
Q 023975 9 SEGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVE-PSFGKR---SV-INHTDYL--VNGRIV 80 (274)
Q Consensus 9 ~~~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~-~~~~~~---~~-~~~~~~~--~~~~~~ 80 (274)
|+.++|||+||||||||++||..|+ .|++|+|||+.. +|+.......... +.+... .+ ....... ....+.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQ 80 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCeeecccccCCcCCccccchHHHHHHHHHHHhhcccccc
Confidence 4456799999999999999999997 499999999865 4433211110000 000000 00 0000000 011221
Q ss_pred EEeeE---EEecCeEEeCCCeEEecCEEEEccCCCCCCChhHH----------------------HHHHHccCCchhhhH
Q 023975 81 ASPAI---NITENEVLTAEGRRVVYDYLVIATGHKDPVPKTRT----------------------ERLNQYQAGPTGVEL 135 (274)
Q Consensus 81 ~~~~~---~~~~~~v~~~~~~~~~~~~li~a~G~~~~~~~~~~----------------------~~~~~~~~g~~~~e~ 135 (274)
..... ..........++.++.||++|+|||+.|..|+++. +++..+++|++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~ 160 (312)
T 4gcm_A 81 YGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEE 160 (312)
T ss_dssp ECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHH
T ss_pred ceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHH
Confidence 11111 11122555667789999999999998765443211 122234559999999
Q ss_pred HHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCcee----EEC--CCCcEEeec
Q 023975 136 AGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT----YLT--STGDTINAD 209 (274)
Q Consensus 136 a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~----v~~--~~g~~~~~d 209 (274)
|..+. ..+.+|+++.+.+.+++. .....+.+++.++.......+..+...+.... ... .++..+++|
T Consensus 161 A~~l~--~~g~~Vtlv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 233 (312)
T 4gcm_A 161 GTFLT--KFADKVTIVHRRDELRAQ-----RILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEAD 233 (312)
T ss_dssp HHHHT--TTCSEEEEECSSSSCCSC-----HHHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECS
T ss_pred HHHHH--hcCCEEEEEecccccCcc-----hhHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeee
Confidence 99998 679999999998876542 22334556777888887777666554433221 122 234579999
Q ss_pred EEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCC
Q 023975 210 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 210 ~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~ 263 (274)
.|++++|..|+..++...++ .+++|+|.||++++| +.|+|||+|||++.+
T Consensus 234 ~v~~~~g~~~~~~~~~~~g~---~~~~G~I~vd~~~~T-s~pgIyA~GDv~~~~ 283 (312)
T 4gcm_A 234 GVFIYIGMKPLTAPFKDLGI---TNDVGYIVTKDDMTT-SVPGIFAAGDVRDKG 283 (312)
T ss_dssp EEEECSCEEESCGGGGGGTC---BCTTSCBCCCTTSBC-SSTTEEECSTTBSCS
T ss_pred eEEeecCCCcCchhHHhcce---ecCCCeEeeCCCCcc-CCCCEEEEeecCCCc
Confidence 99999999999988877665 457899999999999 899999999999754
No 50
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=4.8e-32 Score=230.62 Aligned_cols=244 Identities=17% Similarity=0.192 Sum_probs=178.7
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceee---------------e--------cCC-----ccc
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRA---------------M--------VEP-----SFG 63 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~---------------~--------~~~-----~~~ 63 (274)
++||+|||||++|+++|..|++ |++|+|+|+ +.+|+.|..... . ..- ...
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 4899999999999999999974 999999999 566654321100 0 000 000
Q ss_pred cceeeec------------cccc--cccEEEEEeeEEEecCeEEeCCCeEEecCEEEEccCCCCCCCh-hH-------HH
Q 023975 64 KRSVINH------------TDYL--VNGRIVASPAINITENEVLTAEGRRVVYDYLVIATGHKDPVPK-TR-------TE 121 (274)
Q Consensus 64 ~~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~li~a~G~~~~~~~-~~-------~~ 121 (274)
...+..+ ..++ .+++++......++.+.+.+++ ..+.||++|+|||+.|..|+ .+ ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~~~~v~~~~ 162 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSSSVELPMLPLGGPVISST 162 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEEECCBTTBCCBTTEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCccCcEecHH
Confidence 0000000 0111 2456666655556666777765 78999999999999876543 11 11
Q ss_pred HH----------HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeecc
Q 023975 122 RL----------NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSV 191 (274)
Q Consensus 122 ~~----------~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 191 (274)
.. ..+++|.+|+|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.||+++++++|++++.
T Consensus 163 ~~~~~~~~~~~vvViGgG~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 240 (458)
T 1lvl_A 163 EALAPKALPQHLVVVGGGYIGLELGIAYR--KLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN 240 (458)
T ss_dssp HHTCCSSCCSEEEEECCSHHHHHHHHHHH--HHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET
T ss_pred HHhhhhccCCeEEEECcCHHHHHHHHHHH--HCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe
Confidence 11 12344999999999998 4588999999999988888899999999999999999999999999986
Q ss_pred CCCceeEECCCC--cEEeecEEEEcccCCCCchhh--cccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCC
Q 023975 192 SEGSDTYLTSTG--DTINADCHFLCTGKPVGSDWL--KDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 192 ~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
++ +.+...+| +++++|.||+|+|..|+.+++ ...++ .++++ ++.||++++| +.|+||++|||++.+...
T Consensus 241 -~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~--~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~~~~~ 313 (458)
T 1lvl_A 241 -GC-LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDL--KMNGA-AIAIDERCQT-SMHNVWAIGDVAGEPMLA 313 (458)
T ss_dssp -TE-EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCC--CEETT-EECCCTTCBC-SSTTEEECGGGGCSSCCH
T ss_pred -CC-EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCC--cccCC-EEeECCCCcC-CCCCEEEeeccCCCcccH
Confidence 33 55665556 689999999999999998864 44444 45556 8999999998 899999999999876543
No 51
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.97 E-value=1.5e-30 Score=211.31 Aligned_cols=241 Identities=19% Similarity=0.200 Sum_probs=158.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecc-cee--eecC--Cccccc----ee-eeccccc--cccE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA-SLR--AMVE--PSFGKR----SV-INHTDYL--VNGR 78 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~-~~~--~~~~--~~~~~~----~~-~~~~~~~--~~~~ 78 (274)
.+|||+||||||||++||..|+ +|++|+|+|+....+..+. .+. ..+. +.+... .+ ....+.. ....
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 4599999999999999999997 5999999999765332211 000 0000 000000 00 0000000 1223
Q ss_pred EEEEeeEEEec----CeEEeCCCeEEecCEEEEccCCCCCCChhHHH------------------------HHHHccCCc
Q 023975 79 IVASPAINITE----NEVLTAEGRRVVYDYLVIATGHKDPVPKTRTE------------------------RLNQYQAGP 130 (274)
Q Consensus 79 ~~~~~~~~~~~----~~v~~~~~~~~~~~~li~a~G~~~~~~~~~~~------------------------~~~~~~~g~ 130 (274)
+....+..... ..+.+.++.++.|+++|+|||+.|..|+++.. ++..+++|.
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ 162 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGD 162 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSH
T ss_pred EEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCCh
Confidence 32222222221 15667788899999999999987654432211 112234499
Q ss_pred hhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce---eEE---CCCCc
Q 023975 131 TGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD---TYL---TSTGD 204 (274)
Q Consensus 131 ~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~---~v~---~~~g~ 204 (274)
+++|+|..+. ..+.+|+++.+.+.... ......+.....+++.+....+.+++...... .+. ..+++
T Consensus 163 ig~e~A~~l~--~~G~~Vt~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 235 (314)
T 4a5l_A 163 AAMEEALHLT--KYGSKVIILHRRDAFRA-----SKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYK 235 (314)
T ss_dssp HHHHHHHHHT--TTSSEEEEECSSSSCCS-----CHHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEE
T ss_pred HHHHHHHHHH--HhCCeeeeecccccccc-----cchhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccce
Confidence 9999999998 77999999988765432 12333445566788888888888877554422 222 34456
Q ss_pred EEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 205 TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 205 ~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
++++|.|++++|..|+.+++... ..++++|.+ +|++++| +.|+|||+|||++.|.
T Consensus 236 ~i~~d~vi~a~G~~pn~~~l~~~---~~~~~~G~i-v~~~~~T-s~pgIyA~GDv~~~~~ 290 (314)
T 4a5l_A 236 VVPVAGLFYAIGHSPNSKFLGGQ---VKTADDGYI-LTEGPKT-SVDGVFACGDVCDRVY 290 (314)
T ss_dssp EEECSEEEECSCEEESCGGGTTS---SCBCTTSCB-CCBTTBC-SSTTEEECSTTTCSSC
T ss_pred eeccccceEecccccChhHhccc---ceEcCCeeE-eCCCCcc-CCCCEEEEEeccCCcc
Confidence 89999999999999999988653 246677766 8889999 8999999999998764
No 52
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.97 E-value=3.1e-31 Score=227.32 Aligned_cols=250 Identities=19% Similarity=0.211 Sum_probs=180.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCceeeccceeeec-CCc---------------------ccc-c
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMV-EPS---------------------FGK-R 65 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~g~~~~~~~~~~-~~~---------------------~~~-~ 65 (274)
.++||+|||||+||+++|..|+ . +.+|+|||+++.+++....+...+ ... +.. .
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 3589999999999999999886 2 899999999987654322111100 000 000 0
Q ss_pred eeeecccc----ccccEEEEE-eeEEEe--cCeEEeCCCeEEecCEEEEccCCCCCCChhHH-------H----------
Q 023975 66 SVINHTDY----LVNGRIVAS-PAINIT--ENEVLTAEGRRVVYDYLVIATGHKDPVPKTRT-------E---------- 121 (274)
Q Consensus 66 ~~~~~~~~----~~~~~~~~~-~~~~~~--~~~v~~~~~~~~~~~~li~a~G~~~~~~~~~~-------~---------- 121 (274)
.+.....+ ..+++++.. .+..++ .+.+.+++|.++.||+||+|||+.|..++... .
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~d 169 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGD 169 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHHH
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHHH
Confidence 00000011 125566654 444454 45788888889999999999999877654321 0
Q ss_pred --HHH----------HccCCchhhhHHHHhhhhC--CCCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCcee
Q 023975 122 --RLN----------QYQAGPTGVELAGEIAVDF--PEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERV 186 (274)
Q Consensus 122 --~~~----------~~~~g~~~~e~a~~l~~~~--~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v 186 (274)
.+. .+++|.+++|+|..+.... .+.+++++.+.+.++. .+++.+.+.+.+.+++.||++++++.|
T Consensus 170 ~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V 249 (493)
T 1m6i_A 170 FRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIV 249 (493)
T ss_dssp HHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCE
T ss_pred HHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEE
Confidence 011 1234899999999987421 3678999988766544 356678888999999999999999999
Q ss_pred eeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCC-CCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 187 NLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDT-HGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 187 ~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
++++.+++.+.+++.+|++++||.||+|+|..|+.+++...++ .+++ +|++.||+++++ .|+|||+|||+..+..
T Consensus 250 ~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl--~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~ 325 (493)
T 1m6i_A 250 QSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGL--EIDSDFGGFRVNAELQA--RSNIWVAGDAACFYDI 325 (493)
T ss_dssp EEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTC--CBCTTTCSEECCTTCEE--ETTEEECGGGEEEEET
T ss_pred EEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCC--ccccCCCcEEECCCccc--CCCeeEeeeeEeccCc
Confidence 9998666666788889999999999999999999988876666 4554 588999999998 5999999999986543
No 53
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.97 E-value=4.1e-30 Score=217.02 Aligned_cols=249 Identities=23% Similarity=0.217 Sum_probs=171.3
Q ss_pred CcEEEEcCChHHHHHHHHhhc---CCcEEEEcCCCCceeeccceeeecCCccccceeeecccccc--ccEEEEEeeEEEe
Q 023975 14 KRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV--NGRIVASPAINIT 88 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~~---g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 88 (274)
++|+|||||+||+++|..|++ +++|+|||+++++.+.+.............+...+..+++. +++++.+++..++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id 82 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEEE
Confidence 689999999999999999973 58999999999876543322111111112233344444443 5788888887777
Q ss_pred c--CeEEeCCCeEEecCEEEEccCCCC--CCChhH---------------HHHHHHcc--------CCc-------hhhh
Q 023975 89 E--NEVLTAEGRRVVYDYLVIATGHKD--PVPKTR---------------TERLNQYQ--------AGP-------TGVE 134 (274)
Q Consensus 89 ~--~~v~~~~~~~~~~~~li~a~G~~~--~~~~~~---------------~~~~~~~~--------~g~-------~~~e 134 (274)
. +.|.+++|++++||+||+|||+.+ .+|+.. .+.+..+. ++. .+.|
T Consensus 83 ~~~~~V~~~~g~~i~YD~LViAtG~~~~~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e 162 (430)
T 3hyw_A 83 PDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYE 162 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHH
T ss_pred CCCCEEEECCCCEEECCEEEEeCCCCccCCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHH
Confidence 4 489999999999999999999873 344421 01121111 022 2234
Q ss_pred HHHHhh----hhC--CCCeEEEEeCCCccCC---cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCC--
Q 023975 135 LAGEIA----VDF--PEKKVTLVHKGSRLLE---FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG-- 203 (274)
Q Consensus 135 ~a~~l~----~~~--~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-- 203 (274)
++..+. ... ...+++++...+.+.+ ...+...+.+.+.++++||++++++.|++++. +.+.+...+|
T Consensus 163 ~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~~~~~~~~g~~ 240 (430)
T 3hyw_A 163 FALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNT 240 (430)
T ss_dssp HHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCE
T ss_pred HHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeC--CceEEEeeCCCc
Confidence 433322 111 1346788877665432 33455677788899999999999999999863 4555555554
Q ss_pred cEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 204 DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 204 ~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
+++++|.+++++|..|+ +++...+..+..+.+|++.||+++|++++|||||+|||+..|..
T Consensus 241 ~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~ 301 (430)
T 3hyw_A 241 HEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPI 301 (430)
T ss_dssp EEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCS
T ss_pred eEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCc
Confidence 48999999999999985 66666665445556778999999996699999999999998764
No 54
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=2e-31 Score=217.15 Aligned_cols=239 Identities=18% Similarity=0.179 Sum_probs=168.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecC-Ccccc---ceeee-ccccc--cccEEEEEe
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVE-PSFGK---RSVIN-HTDYL--VNGRIVASP 83 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~-~~~~~---~~~~~-~~~~~--~~~~~~~~~ 83 (274)
+++||+|||||++|+++|+.|+ +|++|+|+|++ +|+.|........ +.+.. ..+.. ..+.. .++++....
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 91 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDI 91 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEESC
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEEE
Confidence 3589999999999999999997 59999999998 5554433111100 11100 00000 00111 134444445
Q ss_pred eEEEecC----eEEeCCCeEEecCEEEEccCCCCCCChhHH--------------H--------HHHHccCCchhhhHHH
Q 023975 84 AINITEN----EVLTAEGRRVVYDYLVIATGHKDPVPKTRT--------------E--------RLNQYQAGPTGVELAG 137 (274)
Q Consensus 84 ~~~~~~~----~v~~~~~~~~~~~~li~a~G~~~~~~~~~~--------------~--------~~~~~~~g~~~~e~a~ 137 (274)
+..++.. .+.++++..+.||++|+|+|..|..|..+. . .+..+++|.+++|++.
T Consensus 92 v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~ 171 (323)
T 3f8d_A 92 VEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAE 171 (323)
T ss_dssp EEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHH
T ss_pred EEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHH
Confidence 5555432 567777789999999999998855443211 0 1111334889999999
Q ss_pred HhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHH-HhCCcEEEcCceeeeeccCCCceeEECCC---Cc--EEeecEE
Q 023975 138 EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWL-ISKKVDVKLGERVNLDSVSEGSDTYLTST---GD--TINADCH 211 (274)
Q Consensus 138 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~i~~~~~v~~i~~~~~~~~v~~~~---g~--~~~~d~v 211 (274)
.+.. .+.+++++.+.+.+.+ .+ .+.+.+ ++.||+++.++.+.++..+++...+.+.+ |+ ++++|.|
T Consensus 172 ~l~~--~g~~v~~~~~~~~~~~--~~----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~v 243 (323)
T 3f8d_A 172 ILSS--YSTKVYLIHRRDTFKA--QP----IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGV 243 (323)
T ss_dssp HHHH--HSSEEEEECSSSSCCS--CH----HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEE
T ss_pred HHHH--hCCeEEEEEeCCCCCc--CH----HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEE
Confidence 9984 4789999999887655 22 333434 44599999999999998775544566554 75 7999999
Q ss_pred EEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCC
Q 023975 212 FLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 212 v~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~ 263 (274)
|+|+|+.|+.+++...++ .++++|++.||++++| +.|+||++|||++.+
T Consensus 244 v~a~G~~p~~~~~~~~g~--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 292 (323)
T 3f8d_A 244 FIEIGFDPPTDFAKSNGI--ETDTNGYIKVDEWMRT-SVPGVFAAGDCTSAW 292 (323)
T ss_dssp EECCCEECCHHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBSTT
T ss_pred EEEECCCCChhHHhhcCe--eecCCCcEecCCCcee-cCCCEEEcceecCCC
Confidence 999999999888877666 5678999999999998 899999999999864
No 55
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=1.2e-30 Score=223.22 Aligned_cols=246 Identities=18% Similarity=0.268 Sum_probs=176.9
Q ss_pred CCcEEEEcCChHHHHHHHHhhc---CCcEEEEcCCCCceeeccceeeecCCcc-ccce-eeeccccc---cccEEEE-Ee
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSF-GKRS-VINHTDYL---VNGRIVA-SP 83 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~---g~~v~vie~~~~~g~~~~~~~~~~~~~~-~~~~-~~~~~~~~---~~~~~~~-~~ 83 (274)
++||+|||||++|+++|..|++ |.+|+|||+.+.+++....+........ .... .....+.+ .+++++. ..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 4799999999999999999973 8999999999876543322221111111 0111 11111111 1455543 34
Q ss_pred eEEEe--cCeEEeC---CCe--EEecCEEEEccCCCCCCCh---hH------------HHHHH------------HccCC
Q 023975 84 AINIT--ENEVLTA---EGR--RVVYDYLVIATGHKDPVPK---TR------------TERLN------------QYQAG 129 (274)
Q Consensus 84 ~~~~~--~~~v~~~---~~~--~~~~~~li~a~G~~~~~~~---~~------------~~~~~------------~~~~g 129 (274)
+..++ .+.+.+. +|. ++.||++|+|||+.|..|+ .+ ...+. .+++|
T Consensus 116 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 195 (480)
T 3cgb_A 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGG 195 (480)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCH
T ss_pred EEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCC
Confidence 44444 3345443 355 7899999999998765443 11 11111 12448
Q ss_pred chhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeec
Q 023975 130 PTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINAD 209 (274)
Q Consensus 130 ~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d 209 (274)
.+++|+|..+. ..+.+++++.+.+.+++.+++.+.+.+.+.+++.|+++++++.|++++.+++...+.++ +.++++|
T Consensus 196 ~~g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D 272 (480)
T 3cgb_A 196 AIGLEMAETFV--ELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKAD 272 (480)
T ss_dssp HHHHHHHHHHH--HTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECS
T ss_pred HHHHHHHHHHH--hcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcC
Confidence 89999999988 56889999999988888888899999999999999999999999999865332234554 4589999
Q ss_pred EEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 210 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 210 ~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
.||+|+|..|+.+++...++ .++++|++.||++++| +.|+|||+|||+..+.
T Consensus 273 ~vi~a~G~~p~~~~l~~~g~--~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~ 324 (480)
T 3cgb_A 273 LVLVSVGVKPNTDFLEGTNI--RTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYH 324 (480)
T ss_dssp EEEECSCEEESCGGGTTSCC--CBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEB
T ss_pred EEEECcCCCcChHHHHhCCc--ccCCCCCEEECCCccC-CCCCEEEeeeEEEecC
Confidence 99999999999888877665 5677899999999999 7999999999997654
No 56
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.97 E-value=2e-31 Score=223.60 Aligned_cols=250 Identities=21% Similarity=0.220 Sum_probs=173.4
Q ss_pred CCcEEEEcCChHHHHHHHHhhc---CCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc-cccEEEEEeeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL-VNGRIVASPAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~---g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 88 (274)
.++|+|||||+||+++|..|++ +.+|+|||+++...+.+.....................+. .+++++...+..++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id 81 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHDSALGID 81 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEE
Confidence 3789999999999999999863 5799999999875433221111111111111112222222 26788888877777
Q ss_pred c--CeEEeCCCeEEecCEEEEccCCCCCCC---hhH--------------------HHHHHHccC---------------
Q 023975 89 E--NEVLTAEGRRVVYDYLVIATGHKDPVP---KTR--------------------TERLNQYQA--------------- 128 (274)
Q Consensus 89 ~--~~v~~~~~~~~~~~~li~a~G~~~~~~---~~~--------------------~~~~~~~~~--------------- 128 (274)
. +.+.+.++.++.||+|++|+|+.+..+ +.. .+.+..+..
T Consensus 82 ~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~ 161 (401)
T 3vrd_B 82 PDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRC 161 (401)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBC
T ss_pred ccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEe
Confidence 4 488899999999999999999874432 210 112222211
Q ss_pred Cc----hhhhHHHHhhhhCCCCeEEEEeCCCccCC--cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCC
Q 023975 129 GP----TGVELAGEIAVDFPEKKVTLVHKGSRLLE--FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST 202 (274)
Q Consensus 129 g~----~~~e~a~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~ 202 (274)
+. .+++++..+.......+++++...+.+.. .+++.+.+.+.+.+++.|++++.++.+..++.+.+...+.+++
T Consensus 162 ~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~ 241 (401)
T 3vrd_B 162 PPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSF 241 (401)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETT
T ss_pred ehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCC
Confidence 11 23455555555556789999988776532 2333344444555678899999999999998888888899999
Q ss_pred CcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCC-ccccCCCCeEEeccccC-CCCCC
Q 023975 203 GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITD-IRVSA 266 (274)
Q Consensus 203 g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~-~~~~~~~~i~~~Gd~~~-~~~~~ 266 (274)
|+++++|.+++++|..|+ .++...++ .+++|++.||++ ++++++|||||+|||++ .|.++
T Consensus 242 g~~i~~D~vi~~~g~~~~-~~~~~~gl---~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk 303 (401)
T 3vrd_B 242 GETFKAAVINLIPPQRAG-KIAQSASL---TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPK 303 (401)
T ss_dssp SCEEECSEEEECCCEEEC-HHHHHTTC---CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCB
T ss_pred CcEEEeeEEEEecCcCCc-hhHhhccc---cccCCCEEECCCcceecCCCCEEEecccccCCCCCc
Confidence 999999999999999885 67777666 578899999987 77668999999999986 34443
No 57
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=2e-31 Score=218.45 Aligned_cols=245 Identities=15% Similarity=0.173 Sum_probs=170.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee---ecC-Cccc---cceee-ecccccc--ccEEE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA---MVE-PSFG---KRSVI-NHTDYLV--NGRIV 80 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~---~~~-~~~~---~~~~~-~~~~~~~--~~~~~ 80 (274)
+++||+|||||++|+++|+.|+ +|++|+|+|+.+.+|+.|..... ... +.+. ...+. ...+... ++.+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 83 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYS 83 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 4589999999999999999997 59999999999888766532100 000 0000 00000 0000111 23332
Q ss_pred E-EeeEEEec--C--eEEeCCCeEEecCEEEEccCCC---CCCChhHH---------------------HHHHHccCCch
Q 023975 81 A-SPAINITE--N--EVLTAEGRRVVYDYLVIATGHK---DPVPKTRT---------------------ERLNQYQAGPT 131 (274)
Q Consensus 81 ~-~~~~~~~~--~--~v~~~~~~~~~~~~li~a~G~~---~~~~~~~~---------------------~~~~~~~~g~~ 131 (274)
. ..+..++. . .+.++++..+.||++|+|+|.. |..|+++. +++..+++|.+
T Consensus 84 ~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~ 163 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGGDS 163 (335)
T ss_dssp ESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCGGGGTTCEEEEECSSHH
T ss_pred eCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCchhhcCCCEEEEECCCHH
Confidence 2 22333322 1 4666677789999999999983 43322110 11112334889
Q ss_pred hhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECC---CC--cEE
Q 023975 132 GVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTS---TG--DTI 206 (274)
Q Consensus 132 ~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~---~g--~~~ 206 (274)
++|+|..+. ..+.+++++.+.+.+.+ .+...+.+.+.+++.||+++.++.+.+++.+++...+.+. +| +++
T Consensus 164 g~e~a~~l~--~~g~~V~~v~~~~~~~~--~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 239 (335)
T 2zbw_A 164 AVDWALNLL--DTARRITLIHRRPQFRA--HEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELAL 239 (335)
T ss_dssp HHHHHHHTT--TTSSEEEEECSSSSCCS--CHHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEE
T ss_pred HHHHHHHHH--hhCCEEEEEEcCCccCc--cHHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEE
Confidence 999999998 56889999999887654 3456778888888899999999999999875443345554 66 579
Q ss_pred eecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 207 NADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 207 ~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
++|.||+|+|+.|+.+++...++. ++ +|++.||+++++ +.|+||++|||+..+.
T Consensus 240 ~~D~vi~a~G~~p~~~~l~~~~~~--~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~ 293 (335)
T 2zbw_A 240 EVDAVLILAGYITKLGPLANWGLA--LE-KNKIKVDTTMAT-SIPGVYACGDIVTYPG 293 (335)
T ss_dssp ECSEEEECCCEEEECGGGGGSCCC--EE-TTEEECCTTCBC-SSTTEEECSTTEECTT
T ss_pred ecCEEEEeecCCCCchHhhhccee--cc-CCeeeeCCCCCC-CCCCEEEeccccccCc
Confidence 999999999999988888776653 44 789999999998 8999999999997653
No 58
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.97 E-value=1.1e-31 Score=219.04 Aligned_cols=239 Identities=17% Similarity=0.205 Sum_probs=164.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecC-Cccc----cceeee-ccccc--cccEEEEE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVE-PSFG----KRSVIN-HTDYL--VNGRIVAS 82 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~-~~~~----~~~~~~-~~~~~--~~~~~~~~ 82 (274)
.++||+|||||++|+++|..|+ .|++|+|+|+. .+|+.+........ +.+. ...+.. ..+.. .++++...
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~ 85 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMD 85 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEee
Confidence 3589999999999999999997 49999999998 45554432211100 0110 000000 00111 13455544
Q ss_pred eeEEEec-------CeEEeCCCeEEecCEEEEccCCCCCCChhHH---------------H-------HHHHccCCchhh
Q 023975 83 PAINITE-------NEVLTAEGRRVVYDYLVIATGHKDPVPKTRT---------------E-------RLNQYQAGPTGV 133 (274)
Q Consensus 83 ~~~~~~~-------~~v~~~~~~~~~~~~li~a~G~~~~~~~~~~---------------~-------~~~~~~~g~~~~ 133 (274)
.+..++. ..+.+.++..+.||++|+|+|..|..|+.+. . ++..+++|.+++
T Consensus 86 ~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~ 165 (325)
T 2q7v_A 86 EVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAV 165 (325)
T ss_dssp CEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHH
T ss_pred eEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHH
Confidence 4444432 1455667778999999999998754443111 0 111134589999
Q ss_pred hHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHH-hCCcEEEcCceeeeeccCCCceeEECC---CCc--EEe
Q 023975 134 ELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLI-SKKVDVKLGERVNLDSVSEGSDTYLTS---TGD--TIN 207 (274)
Q Consensus 134 e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~i~~~~~v~~i~~~~~~~~v~~~---~g~--~~~ 207 (274)
|+|..+. ..+.+++++.+.+.+.. . ..+.+.+. +.||+++++++++++..++....+.+. +|+ +++
T Consensus 166 e~A~~l~--~~g~~Vtlv~~~~~~~~--~----~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~ 237 (325)
T 2q7v_A 166 EEGMFLT--KFADEVTVIHRRDTLRA--N----KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELA 237 (325)
T ss_dssp HHHHHHT--TTCSEEEEECSSSSCCS--C----HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEE
T ss_pred HHHHHHH--hcCCEEEEEeCCCcCCc--c----hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEE
Confidence 9999998 56899999998876532 2 23444454 469999999999999865433345543 564 789
Q ss_pred ecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCC
Q 023975 208 ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 208 ~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~ 263 (274)
+|.||+|+|+.|+.+++... + .++++|++.||+++++ +.|+||++|||++.+
T Consensus 238 ~D~vi~a~G~~p~~~~l~~~-~--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 289 (325)
T 2q7v_A 238 TDGVFIFIGHVPNTAFVKDT-V--SLRDDGYVDVRDEIYT-NIPMLFAAGDVSDYI 289 (325)
T ss_dssp CSEEEECSCEEESCGGGTTT-S--CBCTTSCBCCBTTTBC-SSTTEEECSTTTCSS
T ss_pred cCEEEEccCCCCChHHHhhh-c--ccCCCccEecCCCCcc-CCCCEEEeecccCcc
Confidence 99999999999998888764 3 5678899999999998 899999999999863
No 59
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=8.5e-31 Score=222.50 Aligned_cols=244 Identities=22% Similarity=0.335 Sum_probs=174.7
Q ss_pred CcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCceeeccceeeecCCcc-c-cceeeeccccc--cccEEEE-EeeE
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFEITWASLRAMVEPSF-G-KRSVINHTDYL--VNGRIVA-SPAI 85 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~g~~~~~~~~~~~~~~-~-~~~~~~~~~~~--~~~~~~~-~~~~ 85 (274)
+||+|||||++|+++|..|+ . |++|+|+|+++.+++....+........ . ........+++ .++++.. ..+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 48999999999999999997 3 8999999999877643322211111111 0 11111111111 1455533 3333
Q ss_pred EEe--cCeEEeC---CCe--EEecCEEEEccCCCCCCChhH------------HH---HHH------------HccCCch
Q 023975 86 NIT--ENEVLTA---EGR--RVVYDYLVIATGHKDPVPKTR------------TE---RLN------------QYQAGPT 131 (274)
Q Consensus 86 ~~~--~~~v~~~---~~~--~~~~~~li~a~G~~~~~~~~~------------~~---~~~------------~~~~g~~ 131 (274)
.++ .+.+.+. +|. ++.||++|+|||+.|..|+.+ .. .+. .+++|.+
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~ 160 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYI 160 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHH
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHH
Confidence 443 3455553 254 489999999999875544311 11 111 1344889
Q ss_pred hhhHHHHhhhhCCCCeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecE
Q 023975 132 GVELAGEIAVDFPEKKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADC 210 (274)
Q Consensus 132 ~~e~a~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~ 210 (274)
++|+|..+. ..+.+++++.+.+.+++ .+++.+.+.+.+.+++.|+++++++.|++++.++....+.+ +++++++|.
T Consensus 161 g~e~A~~l~--~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~ 237 (447)
T 1nhp_A 161 GIEAAEAFA--KAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADL 237 (447)
T ss_dssp HHHHHHHHH--HTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSE
T ss_pred HHHHHHHHH--HCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCE
Confidence 999999988 56889999999988887 57888999999999999999999999999986633324555 556899999
Q ss_pred EEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 211 HFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 211 vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
||+|+|..|+.+++... + .++.+|++.||++++| +.|+||++|||+..+.
T Consensus 238 vi~a~G~~p~~~~~~~~-~--~~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~ 287 (447)
T 1nhp_A 238 VVVAVGVRPNTAWLKGT-L--ELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKY 287 (447)
T ss_dssp EEECSCEEESCGGGTTT-S--CBCTTSCBCCCTTCBC-SSTTEEECGGGSCEEE
T ss_pred EEECcCCCCChHHHHhh-h--hhcCCCcEEECccccC-CCCCEEEeeeEEEeec
Confidence 99999999998887654 4 5677899999999999 8999999999997543
No 60
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=8.6e-30 Score=214.11 Aligned_cols=246 Identities=18% Similarity=0.201 Sum_probs=174.8
Q ss_pred CcEEEEcCChHHHHHHHHhh----cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEEeeEEE
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ----FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASPAINI 87 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~----~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (274)
+||+|||||++|+++|..|+ +|++|+|+|+++.+++.+.............+......+.+ .+++++...+..+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 68999999999999999985 48999999999987654332221111111122222222222 2567776666666
Q ss_pred ecC--eEEeCCCe----EEecCEEEEccCCCCCCC---hhHH-----------HHHH----H-------ccCC-------
Q 023975 88 TEN--EVLTAEGR----RVVYDYLVIATGHKDPVP---KTRT-----------ERLN----Q-------YQAG------- 129 (274)
Q Consensus 88 ~~~--~v~~~~~~----~~~~~~li~a~G~~~~~~---~~~~-----------~~~~----~-------~~~g------- 129 (274)
+.. .+.+.++. ++.||++|+|+|..|..| +... ..+. . +++|
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~ 161 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHN 161 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCS
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCC
Confidence 643 67776664 389999999999986543 3221 1111 1 1224
Q ss_pred ------------c------hhhhHHHHhhhh--CCC----CeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCce
Q 023975 130 ------------P------TGVELAGEIAVD--FPE----KKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGER 185 (274)
Q Consensus 130 ------------~------~~~e~a~~l~~~--~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~ 185 (274)
. .++|++..+... ..+ .+++++.+.+ +++..++.+.+.+.+.+++.||+++++++
T Consensus 162 ~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~ 240 (409)
T 3h8l_A 162 PKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFK 240 (409)
T ss_dssp SCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCC
T ss_pred ccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCc
Confidence 1 356777554321 334 4899999888 66777788999999999999999999999
Q ss_pred eeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 186 VNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 186 v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
|++++.++ +++++|+++++|.||+++|+.|+ +++...+.++ .+++|++.||+.+++++.||||++|||++.+.+
T Consensus 241 v~~i~~~~----v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~ 314 (409)
T 3h8l_A 241 IKEIREHE----IVDEKGNTIPADITILLPPYTGN-PALKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVP 314 (409)
T ss_dssp EEEECSSE----EEETTSCEEECSEEEEECCEECC-HHHHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCS
T ss_pred eEEECCCe----EEECCCCEEeeeEEEECCCCCcc-HHHHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCC
Confidence 99997542 77888999999999999999986 5666663333 467899999999999889999999999986544
Q ss_pred C
Q 023975 266 A 266 (274)
Q Consensus 266 ~ 266 (274)
+
T Consensus 315 ~ 315 (409)
T 3h8l_A 315 K 315 (409)
T ss_dssp C
T ss_pred c
Confidence 3
No 61
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.97 E-value=1.2e-30 Score=211.84 Aligned_cols=241 Identities=15% Similarity=0.137 Sum_probs=163.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEE-EcCCCCceeeccceeeecC-Cccc----cceee-eccccc--cccEEEE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTL-IDPKEYFEITWASLRAMVE-PSFG----KRSVI-NHTDYL--VNGRIVA 81 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~v-ie~~~~~g~~~~~~~~~~~-~~~~----~~~~~-~~~~~~--~~~~~~~ 81 (274)
.++||+|||||++|+++|+.|++ |++|+| +|| +.+|+.|........ +.+. ...+. ...++. .++++..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEM 81 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEE
Confidence 45899999999999999999984 999999 999 556655433221100 0100 00000 001111 1344444
Q ss_pred EeeEEE-ec--CeEE--e-CCCeEEecCEEEEccCCCCCCChhHH----------------------HHHHHccCCchhh
Q 023975 82 SPAINI-TE--NEVL--T-AEGRRVVYDYLVIATGHKDPVPKTRT----------------------ERLNQYQAGPTGV 133 (274)
Q Consensus 82 ~~~~~~-~~--~~v~--~-~~~~~~~~~~li~a~G~~~~~~~~~~----------------------~~~~~~~~g~~~~ 133 (274)
..+..+ +. +.+. . .++ .+.||++|+|+|..|..|..+. +.+..+++|.+++
T Consensus 82 ~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~ 160 (315)
T 3r9u_A 82 VGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTAL 160 (315)
T ss_dssp CCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHH
T ss_pred EEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHH
Confidence 444444 33 2222 2 333 8999999999998755443211 1112234488999
Q ss_pred hHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCc---eeEECCCCc--EEee
Q 023975 134 ELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS---DTYLTSTGD--TINA 208 (274)
Q Consensus 134 e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~ 208 (274)
|+|..+. ..+.+++++.+.+.+.. . ...+.+.+++.||++++++.+.++..+++. +.+...+|+ ++++
T Consensus 161 e~a~~l~--~~g~~v~~~~~~~~~~~--~---~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~ 233 (315)
T 3r9u_A 161 EEALYLA--NICSKIYLIHRRDEFRA--A---PSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNV 233 (315)
T ss_dssp HHHHHHH--TTSSEEEEECSSSSCBS--C---HHHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECC
T ss_pred HHHHHHH--hhCCEEEEEEeCCCCCC--C---HHHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeec
Confidence 9999998 56889999998877522 2 233445557889999999999999876543 233344775 7999
Q ss_pred cEEEEcccCCCCchhhcc-cccc-cccCCCCcEEeCCCccccCCCCeEEeccccCC
Q 023975 209 DCHFLCTGKPVGSDWLKD-TILK-DSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 262 (274)
Q Consensus 209 d~vv~a~G~~~~~~~~~~-~~~~-~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~ 262 (274)
|.||+|+|+.|+..++.. ..++ +.++++|++.||++++| +.|+||++|||++.
T Consensus 234 D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~~~~ 288 (315)
T 3r9u_A 234 PGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQT-SVAGLFAAGDLRKD 288 (315)
T ss_dssp SCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECGGGBTT
T ss_pred CeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCccc-CCCCEEEeecccCC
Confidence 999999999999888876 2232 46778899999999999 89999999999864
No 62
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.97 E-value=1.7e-30 Score=213.08 Aligned_cols=240 Identities=15% Similarity=0.147 Sum_probs=165.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC----CceeeccceeeecC-Ccccc----cee-eeccccc--ccc
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE----YFEITWASLRAMVE-PSFGK----RSV-INHTDYL--VNG 77 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~----~~g~~~~~~~~~~~-~~~~~----~~~-~~~~~~~--~~~ 77 (274)
.+++||+|||||++|+++|+.|+ +|++|+|+|+.+ .+|+.|........ +.+.. ..+ ....+.. .++
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 99 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGT 99 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCC
Confidence 45689999999999999999998 599999999954 55655443221110 01100 000 0000111 145
Q ss_pred EEEEEeeEEEecC----eEEe---CCCeEEecCEEEEccCCCCCCChhHHHH------------------------HHHc
Q 023975 78 RIVASPAINITEN----EVLT---AEGRRVVYDYLVIATGHKDPVPKTRTER------------------------LNQY 126 (274)
Q Consensus 78 ~~~~~~~~~~~~~----~v~~---~~~~~~~~~~li~a~G~~~~~~~~~~~~------------------------~~~~ 126 (274)
++....+..++.. .+.+ .++..+.||++|+|+|..+..|.++... +..+
T Consensus 100 ~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vv 179 (338)
T 3itj_A 100 EIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVI 179 (338)
T ss_dssp EEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEE
T ss_pred EEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEE
Confidence 5554444455432 3333 3667899999999999875544322111 1123
Q ss_pred cCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhC-CcEEEcCceeeeeccCCCce-eEECCC--
Q 023975 127 QAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISK-KVDVKLGERVNLDSVSEGSD-TYLTST-- 202 (274)
Q Consensus 127 ~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~-- 202 (274)
++|.+++|+|..+. ..+.+++++.+.+.+.+ ...+.+.+.+. ||++++++.+.+++.+++.+ .+++.+
T Consensus 180 G~G~~g~e~a~~l~--~~g~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~ 251 (338)
T 3itj_A 180 GGGDSACEEAQFLT--KYGSKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTK 251 (338)
T ss_dssp CSSHHHHHHHHHHT--TTSSEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETT
T ss_pred CCCHHHHHHHHHHH--hcCCEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECC
Confidence 34889999999998 56889999999887643 34555666554 99999999999998776543 355544
Q ss_pred ---CcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEe-CCCccccCCCCeEEeccccCC
Q 023975 203 ---GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMV-DENLRVKGQKNIFAIGDITDI 262 (274)
Q Consensus 203 ---g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~i~~~Gd~~~~ 262 (274)
++++++|.||+|+|+.|+..++.. ++ .++++|++.+ |..+++ +.|+||++|||++.
T Consensus 252 ~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l--~~~~~G~i~v~~~~~~t-~~~~vya~GD~~~~ 311 (338)
T 3itj_A 252 KNEETDLPVSGLFYAIGHTPATKIVAG-QV--DTDEAGYIKTVPGSSLT-SVPGFFAAGDVQDS 311 (338)
T ss_dssp TTEEEEEECSEEEECSCEEECCGGGBT-TB--CBCTTSCBCCCTTSSBC-SSTTEEECGGGGCS
T ss_pred CCceEEEEeCEEEEEeCCCCChhHhhC-ce--EecCCCcEEEcCccccc-CCCCEEEeeccCCC
Confidence 357999999999999999888876 44 6778999985 778888 89999999999974
No 63
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.97 E-value=1.9e-30 Score=211.24 Aligned_cols=241 Identities=15% Similarity=0.156 Sum_probs=168.0
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeec-CCccc----cceeee-ccccc--cccEEEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMV-EPSFG----KRSVIN-HTDYL--VNGRIVASP 83 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~-~~~~~----~~~~~~-~~~~~--~~~~~~~~~ 83 (274)
++||+|||||++|+++|+.|++ |++|+|+|+. .+|+.+....... .+.+. ...... ..... .++++....
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 4799999999999999999975 9999999975 4444332211100 00110 000000 00111 134555444
Q ss_pred eEEEec--CeEE-eCCCeEEecCEEEEccCCCCCCChhHHHH----------------------HHHccCCchhhhHHHH
Q 023975 84 AINITE--NEVL-TAEGRRVVYDYLVIATGHKDPVPKTRTER----------------------LNQYQAGPTGVELAGE 138 (274)
Q Consensus 84 ~~~~~~--~~v~-~~~~~~~~~~~li~a~G~~~~~~~~~~~~----------------------~~~~~~g~~~~e~a~~ 138 (274)
+..++. +.+. +.++..+.||++++|+|..|..|+++... +..+++|.+++|+|..
T Consensus 84 v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~ 163 (320)
T 1trb_A 84 INKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALY 163 (320)
T ss_dssp EEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHH
T ss_pred eeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHH
Confidence 444443 2222 55677899999999999887665543221 1113448899999999
Q ss_pred hhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEECCC----C--cEEeecEE
Q 023975 139 IAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTST----G--DTINADCH 211 (274)
Q Consensus 139 l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~----g--~~~~~d~v 211 (274)
+. ..+.+++++.+.+.+. ..+.+.+.+.+.+++.||++++++++.+++.+++.+ .+++.+ | +++++|.|
T Consensus 164 l~--~~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~v 239 (320)
T 1trb_A 164 LS--NIASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239 (320)
T ss_dssp HT--TTSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEE
T ss_pred HH--hcCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEE
Confidence 98 5688999999887653 255677788888899999999999999998766443 355433 4 57999999
Q ss_pred EEcccCCCCchhhcccccccccCCCCcEEeCCCc-----cccCCCCeEEeccccCCC
Q 023975 212 FLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENL-----RVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 212 v~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~-----~~~~~~~i~~~Gd~~~~~ 263 (274)
|+|+|+.|+.+++. .++ .++ +|++.+|+.+ ++ +.|+||++|||++.+
T Consensus 240 v~a~G~~p~~~~~~-~~l--~~~-~G~i~vd~~~~~~~~~t-~~~~vya~GD~~~~~ 291 (320)
T 1trb_A 240 FVAIGHSPNTAIFE-GQL--ELE-NGYIKVQSGIHGNATQT-SIPGVFAAGDVMDHI 291 (320)
T ss_dssp EECSCEEESCGGGT-TTS--CEE-TTEECCCCSSSSCTTBC-SSTTEEECGGGGCSS
T ss_pred EEEeCCCCChHHhc-ccc--ccc-CceEEECCCcccccccC-CCCCEEEcccccCCc
Confidence 99999999988876 344 456 8999999986 66 899999999999875
No 64
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.97 E-value=1.5e-30 Score=211.82 Aligned_cols=239 Identities=19% Similarity=0.207 Sum_probs=163.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeec-CCcc---ccceeee-ccccc--cccEEEEEe
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV-EPSF---GKRSVIN-HTDYL--VNGRIVASP 83 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~-~~~~---~~~~~~~-~~~~~--~~~~~~~~~ 83 (274)
+++||+|||||++|+++|+.|+ .|++|+|+|+. .+|+.+....... .+.+ ....... ..+.. .++++....
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 93 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVE 93 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEee
Confidence 3589999999999999999997 49999999995 4444332211100 0000 0000000 00001 133443333
Q ss_pred eEEEe--cC--eEEeCCCeEEecCEEEEccCCCCCCChhHH----------------------HHHHHccCCchhhhHHH
Q 023975 84 AINIT--EN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT----------------------ERLNQYQAGPTGVELAG 137 (274)
Q Consensus 84 ~~~~~--~~--~v~~~~~~~~~~~~li~a~G~~~~~~~~~~----------------------~~~~~~~~g~~~~e~a~ 137 (274)
+..++ .+ .+.+ ++..+.||++|+|+|..|..|+++. +.+..+++|.+++|+|.
T Consensus 94 v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~ 172 (319)
T 3cty_A 94 VRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAI 172 (319)
T ss_dssp EEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHH
T ss_pred EEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHH
Confidence 33333 23 3555 4567999999999998755443211 01112345889999999
Q ss_pred HhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCc-eeEECC---CCc--EEeecEE
Q 023975 138 EIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTS---TGD--TINADCH 211 (274)
Q Consensus 138 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~---~g~--~~~~d~v 211 (274)
.+. ..+.+++++.+.+.+.. ...+.+.+++.||+++++++++++..+++. ..+.+. +|+ ++++|.|
T Consensus 173 ~l~--~~g~~V~~i~~~~~~~~------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~v 244 (319)
T 3cty_A 173 SMS--EYVKNVTIIEYMPKYMC------ENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGV 244 (319)
T ss_dssp HHT--TTBSEEEEECSSSSCCS------CHHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEE
T ss_pred HHH--hhCCcEEEEEcCCccCC------CHHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEE
Confidence 998 56889999998776532 234566677899999999999999876542 244443 564 6999999
Q ss_pred EEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCC
Q 023975 212 FLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 212 v~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~ 263 (274)
|+|+|+.|+.+++...++ .++++|++.||+++++ +.|+||++|||++.+
T Consensus 245 i~a~G~~p~~~~l~~~gl--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 293 (319)
T 3cty_A 245 FIYVGLIPQTSFLKDSGV--KLDERGYIVVDSRQRT-SVPGVYAAGDVTSGN 293 (319)
T ss_dssp EECCCEEECCGGGTTSCC--CBCTTSCBCCCTTCBC-SSTTEEECSTTBTTC
T ss_pred EEeeCCccChHHHhhccc--cccCCccEeCCCCCcc-CCCCEEEeecccCcc
Confidence 999999999998876655 5678899999999998 899999999999864
No 65
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.97 E-value=3.9e-30 Score=212.78 Aligned_cols=245 Identities=20% Similarity=0.209 Sum_probs=170.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee---ec-CCcccc---ceee-eccccc--cccEEE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA---MV-EPSFGK---RSVI-NHTDYL--VNGRIV 80 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~---~~-~~~~~~---~~~~-~~~~~~--~~~~~~ 80 (274)
.++||+|||||++|+++|+.|+ +|++|+|||+.+.+|+.|..... .. .+.+.. ..+. ...+.. .++.+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 92 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVV 92 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEE
Confidence 3589999999999999999997 59999999999888766532110 00 000000 0000 000000 123332
Q ss_pred E-EeeEEEe--cC---eEEeCCCeEEecCEEEEccCCC---CCCChhHH--H--------------------HHHHccCC
Q 023975 81 A-SPAINIT--EN---EVLTAEGRRVVYDYLVIATGHK---DPVPKTRT--E--------------------RLNQYQAG 129 (274)
Q Consensus 81 ~-~~~~~~~--~~---~v~~~~~~~~~~~~li~a~G~~---~~~~~~~~--~--------------------~~~~~~~g 129 (274)
. ..+..++ .+ .+.+.++..+.||++|+|+|.. |..++++. . .+..+++|
T Consensus 93 ~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~~~~~~vvVvG~G 172 (360)
T 3ab1_A 93 LNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGG 172 (360)
T ss_dssp CSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGGGGTTCEEEEECSS
T ss_pred cCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHHHcCCCcEEEECCC
Confidence 2 2233333 22 5677778789999999999983 44433222 1 01112348
Q ss_pred chhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEEC--CCC--c
Q 023975 130 PTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLT--STG--D 204 (274)
Q Consensus 130 ~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~--~~g--~ 204 (274)
.+++|+|..+. ..+.+++++.+.+.+.+. +.+.+.+.+.+++.||+++.++++.++..+++.+ .+.+ .+| +
T Consensus 173 ~~g~e~A~~l~--~~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~ 248 (360)
T 3ab1_A 173 DSALDWTVGLI--KNAASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKW 248 (360)
T ss_dssp HHHHHHHHHTT--TTSSEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEE
T ss_pred HHHHHHHHHHH--hcCCEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeE
Confidence 89999999998 568899999998776542 3466777788888999999999999998765533 4444 367 5
Q ss_pred EEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 205 TINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 205 ~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
++++|.||+|+|+.|+.+++...++ .++ +|++.||++++| +.|+||++|||+..+.
T Consensus 249 ~i~~D~vi~a~G~~p~~~~l~~~~~--~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~ 304 (360)
T 3ab1_A 249 TVEADRLLILIGFKSNLGPLARWDL--ELY-ENALVVDSHMKT-SVDGLYAAGDIAYYPG 304 (360)
T ss_dssp EEECSEEEECCCBCCSCGGGGGSSC--CEE-TTEEECCTTSBC-SSTTEEECSTTEECTT
T ss_pred EEeCCEEEECCCCCCCHHHHHhhcc--ccc-cCeeeecCCCcC-CCCCEEEecCccCCCC
Confidence 7999999999999999888877665 344 789999999998 8999999999997653
No 66
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.97 E-value=3.1e-30 Score=209.18 Aligned_cols=240 Identities=18% Similarity=0.184 Sum_probs=163.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCceeeccceeeec-CCcc----ccceeee-ccccc--cccEEEEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWASLRAMV-EPSF----GKRSVIN-HTDYL--VNGRIVAS 82 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~~g~~~~~~~~~~-~~~~----~~~~~~~-~~~~~--~~~~~~~~ 82 (274)
++||+|||||++|+++|+.|+ .|+ +|+|+|+. .+|+.+....... .+.+ ....+.. ..+.. .++++...
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 79 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMT 79 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECS
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 379999999999999999997 599 99999996 4444332211100 0000 0000000 00101 13444433
Q ss_pred eeEEEe--cC--eEEeCCCeEEecCEEEEccCCCCCCChhHHHH----------------------HHHccCCchhhhHH
Q 023975 83 PAINIT--EN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRTER----------------------LNQYQAGPTGVELA 136 (274)
Q Consensus 83 ~~~~~~--~~--~v~~~~~~~~~~~~li~a~G~~~~~~~~~~~~----------------------~~~~~~g~~~~e~a 136 (274)
.+..++ .+ .+.+.++..+.+|++|+|+|..|..|..+... +..+++|.+++|+|
T Consensus 80 ~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A 159 (311)
T 2q0l_A 80 AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEA 159 (311)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHH
T ss_pred EEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHH
Confidence 333333 33 46567778899999999999876554422111 11134488999999
Q ss_pred HHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHH-hCCcEEEcCceeeeeccCCCce-eEECC---CCc--EEeec
Q 023975 137 GEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLI-SKKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--TINAD 209 (274)
Q Consensus 137 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~~~~d 209 (274)
..+. ..+.+++++.+.+.+. .+ ..+.+.+. +.||++++++.+.++..+++.+ .+.+. +|+ ++++|
T Consensus 160 ~~l~--~~g~~Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D 231 (311)
T 2q0l_A 160 IYLA--NICKKVYLIHRRDGFR--CA----PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVP 231 (311)
T ss_dssp HHHH--TTSSEEEEECSSSSCC--SC----HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECS
T ss_pred HHHH--hcCCEEEEEeeCCccC--CC----HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecC
Confidence 9998 5688999999887652 22 23445554 4799999999999998664432 45544 565 78999
Q ss_pred EEEEcccCCCCchhhcccc--cccccCCCCcEEeCCCccccCCCCeEEeccccCC
Q 023975 210 CHFLCTGKPVGSDWLKDTI--LKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 262 (274)
Q Consensus 210 ~vv~a~G~~~~~~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~ 262 (274)
.||+|+|+.|+.+++...+ .++.++++|++.||++++| +.|+||++|||++.
T Consensus 232 ~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~ 285 (311)
T 2q0l_A 232 GFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKT-NVQGLFAAGDIRIF 285 (311)
T ss_dssp EEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECSTTBTT
T ss_pred EEEEEecCccChhhhhcccccceeEeccCCCEEeCCcccc-CCCCeEEcccccCc
Confidence 9999999999988887654 1235678899999999998 89999999999986
No 67
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.97 E-value=3.8e-30 Score=210.40 Aligned_cols=238 Identities=17% Similarity=0.210 Sum_probs=166.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee----ecCCcccc---ceee-eccccc--cccEEE-
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA----MVEPSFGK---RSVI-NHTDYL--VNGRIV- 80 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~----~~~~~~~~---~~~~-~~~~~~--~~~~~~- 80 (274)
++||+|||||++|+++|+.|+ +|++|+|+|+.+.+|+.|..... ...+.+.. ..+. ...+.. .++++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICL 86 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEc
Confidence 479999999999999999997 59999999999998866632100 00000000 0000 000111 133443
Q ss_pred EEeeEEEe--cC---eEEeCCCeEEecCEEEEccCC---CCCCChh---HH------------------HHHHHccCCch
Q 023975 81 ASPAINIT--EN---EVLTAEGRRVVYDYLVIATGH---KDPVPKT---RT------------------ERLNQYQAGPT 131 (274)
Q Consensus 81 ~~~~~~~~--~~---~v~~~~~~~~~~~~li~a~G~---~~~~~~~---~~------------------~~~~~~~~g~~ 131 (274)
...+..++ .+ .+.++++. +.||++|+|+|. .|..|.. .. +.+..+++|.+
T Consensus 87 ~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~v~vvG~g~~ 165 (332)
T 3lzw_A 87 EQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQKFAGRRVAILGGGDS 165 (332)
T ss_dssp SCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEESSCSCGGGGBTCEEEEECSSHH
T ss_pred cCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEEecCCHHHcCCCEEEEECCCHh
Confidence 23333333 22 56666664 999999999999 5544332 11 11122334889
Q ss_pred hhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCC-----CcEE
Q 023975 132 GVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST-----GDTI 206 (274)
Q Consensus 132 ~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~-----g~~~ 206 (274)
++|++..+. ..+.+++++.+.+.+.+. ....+.+++.||+++.++.+.+++.+++...+.+.+ ++++
T Consensus 166 ~~e~a~~l~--~~~~~v~~~~~~~~~~~~------~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~ 237 (332)
T 3lzw_A 166 AVDWALMLE--PIAKEVSIIHRRDKFRAH------EHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEIL 237 (332)
T ss_dssp HHHHHHHHT--TTBSEEEEECSSSSCSSC------HHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEE
T ss_pred HHHHHHHHH--hhCCeEEEEEecCcCCcc------HHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEE
Confidence 999999998 568899999998875431 223455788999999999999998776655666554 3579
Q ss_pred eecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCC
Q 023975 207 NADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 207 ~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~ 263 (274)
++|.||+|+|+.|+.+++...++. . ++|++.||++++| +.|+||++|||+..+
T Consensus 238 ~~D~vv~a~G~~p~~~~~~~~~~~--~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~ 290 (332)
T 3lzw_A 238 EIDDLIVNYGFVSSLGPIKNWGLD--I-EKNSIVVKSTMET-NIEGFFAAGDICTYE 290 (332)
T ss_dssp ECSEEEECCCEECCCGGGGGSSCC--E-ETTEEECCTTSBC-SSTTEEECGGGEECT
T ss_pred ECCEEEEeeccCCCchHHhhcCcc--c-cCCeEEeCCCCce-ecCCEEEccceecCC
Confidence 999999999999999988877763 4 6899999999998 899999999999654
No 68
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.96 E-value=9.8e-30 Score=223.25 Aligned_cols=247 Identities=17% Similarity=0.195 Sum_probs=169.4
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCC-C-------Cceeeccceee-----------------------e-
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK-E-------YFEITWASLRA-----------------------M- 57 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~-~-------~~g~~~~~~~~-----------------------~- 57 (274)
..++||+||||||||+++|..|+ .|++|+|+|+. + .+|+.+..... .
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 34689999999999999999997 59999999973 2 24432211000 0
Q ss_pred cCC---ccccceeeec------------cc-c-ccccEEEEEeeEEEecCeE--EeCCC--eEEecCEEEEccCCCCCCC
Q 023975 58 VEP---SFGKRSVINH------------TD-Y-LVNGRIVASPAINITENEV--LTAEG--RRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 58 ~~~---~~~~~~~~~~------------~~-~-~~~~~~~~~~~~~~~~~~v--~~~~~--~~~~~~~li~a~G~~~~~~ 116 (274)
... .........+ .. + ..+++++......++...+ ...+| .++.||++|+|||+.|..|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~p 264 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYP 264 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCCC
Confidence 000 0000000000 00 0 1245555555555555533 33455 4689999999999987665
Q ss_pred hhHHH--------HHH----------HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCc
Q 023975 117 KTRTE--------RLN----------QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKV 178 (274)
Q Consensus 117 ~~~~~--------~~~----------~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 178 (274)
+++.. .+. .+++|.+|+|+|..+. ..+.+|+++.+. .+++.+++.+.+.+.+.+++.||
T Consensus 265 ~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~--~~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv 341 (598)
T 2x8g_A 265 EIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLA--SLGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGV 341 (598)
T ss_dssp SSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHH--HTTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHH--HcCCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCC
Confidence 53321 111 2344899999999998 568899999987 66777888899999999999999
Q ss_pred EEEcCceeeeeccC------C---CceeE--ECCCCcEEe--ecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCc
Q 023975 179 DVKLGERVNLDSVS------E---GSDTY--LTSTGDTIN--ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENL 245 (274)
Q Consensus 179 ~i~~~~~v~~i~~~------~---~~~~v--~~~~g~~~~--~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~ 245 (274)
++++++.+.+++.. + +.+.+ .+.+|+++. +|.||+|+|..|+.+++.....++.++++|+|.||+++
T Consensus 342 ~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 421 (598)
T 2x8g_A 342 KFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDE 421 (598)
T ss_dssp EEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTS
T ss_pred EEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCC
Confidence 99999888777421 1 33333 346776555 99999999999998876433344467788999999999
Q ss_pred cccCCCCeEEeccccC
Q 023975 246 RVKGQKNIFAIGDITD 261 (274)
Q Consensus 246 ~~~~~~~i~~~Gd~~~ 261 (274)
+| +.|+|||+|||+.
T Consensus 422 ~t-s~~~VyA~GD~~~ 436 (598)
T 2x8g_A 422 QT-TVSNVYAIGDINA 436 (598)
T ss_dssp BC-SSTTEEECGGGBT
T ss_pred cC-CCCCEEEEeeecC
Confidence 98 8999999999953
No 69
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=1.3e-28 Score=208.17 Aligned_cols=248 Identities=24% Similarity=0.221 Sum_probs=168.8
Q ss_pred CCcEEEEcCChHHHHHHHHhh---cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEEeeEEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASPAINI 87 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~---~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 87 (274)
++||+|||||++|+++|+.|+ +|++|+|||+++.+++.+....................+.+ .+++++...+..+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEE
Confidence 479999999999999999996 38999999999987754322111111111122223333333 2566666666666
Q ss_pred ecC--eEEeCCCeEEecCEEEEccCCCCCCChhHH----------HH-------HHH---------ccCCchh------h
Q 023975 88 TEN--EVLTAEGRRVVYDYLVIATGHKDPVPKTRT----------ER-------LNQ---------YQAGPTG------V 133 (274)
Q Consensus 88 ~~~--~v~~~~~~~~~~~~li~a~G~~~~~~~~~~----------~~-------~~~---------~~~g~~~------~ 133 (274)
+.. .+.++++.++.||++|+|+|..+..|+... .. +.. +++|.++ +
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~ 161 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAY 161 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHH
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcccccCCCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHH
Confidence 643 788888888999999999999876664211 11 111 1123332 7
Q ss_pred hHHHHhhhh--CCC----CeEEEEeCCCccCC---cCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEEC--CC
Q 023975 134 ELAGEIAVD--FPE----KKVTLVHKGSRLLE---FIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT--ST 202 (274)
Q Consensus 134 e~a~~l~~~--~~~----~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~--~~ 202 (274)
|++..+... ..+ .+++++.+.+.+.. ...+.....+.+.+++.||++++++.|++++.+ .+.+.. .+
T Consensus 162 E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~--~v~~~~~~~~ 239 (430)
T 3h28_A 162 EFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPD--KVIYEDLNGN 239 (430)
T ss_dssp HHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSS--EEEEECTTSC
T ss_pred HHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeCC--eEEEEecCCC
Confidence 777544321 123 47889988876532 112347788889999999999999999999743 333332 12
Q ss_pred CcEEeecEEEEcccCCCCchhhcccccccccCCCC-cEEeCCCccccCCCCeEEeccccCCCC
Q 023975 203 GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHG-MLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 203 g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
++++++|.||+++|+.++. ++...+.++ .+++| ++.||++++++++|+||++|||++.+.
T Consensus 240 g~~i~~D~vv~a~G~~~~~-~l~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~ 300 (430)
T 3h28_A 240 THEVPAKFTMFMPSFQGPE-VVASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPP 300 (430)
T ss_dssp EEEEECSEEEEECEEECCH-HHHTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCC
T ss_pred ceEEeeeEEEECCCCccch-hHhhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCC
Confidence 6789999999999998854 444431222 56789 999999999888999999999998764
No 70
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.96 E-value=3.2e-29 Score=203.13 Aligned_cols=238 Identities=21% Similarity=0.243 Sum_probs=163.4
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeee---cCCcc-ccceee-eccccc--cccEEEEE-e
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAM---VEPSF-GKRSVI-NHTDYL--VNGRIVAS-P 83 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~---~~~~~-~~~~~~-~~~~~~--~~~~~~~~-~ 83 (274)
++||+|||||++|+++|..|++ |++|+|+|+. +|+.|...... ..... ....+. ...++. .++++... .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 78 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQS 78 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCE
Confidence 3799999999999999999985 9999999864 44443321111 00000 000000 001111 13455444 4
Q ss_pred eEEEec-------CeEEeCCCeEEecCEEEEccCCCCCCChhHH----------------------HHHHHccCCchhhh
Q 023975 84 AINITE-------NEVLTAEGRRVVYDYLVIATGHKDPVPKTRT----------------------ERLNQYQAGPTGVE 134 (274)
Q Consensus 84 ~~~~~~-------~~v~~~~~~~~~~~~li~a~G~~~~~~~~~~----------------------~~~~~~~~g~~~~e 134 (274)
+..++. ..+.++++..+.||++|+|+|..|..|+.+. +++..+++|.+++|
T Consensus 79 v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e 158 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVE 158 (310)
T ss_dssp EEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHH
T ss_pred EEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHH
Confidence 444432 1566777878999999999998754332111 01112345899999
Q ss_pred HHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHh-CCcEEEcCceeeeeccCCCce-eEECC---CCc--EEe
Q 023975 135 LAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--TIN 207 (274)
Q Consensus 135 ~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~~~ 207 (274)
+|..|. ..+.+++++.+.+.+. .+ ..+.+.+++ .||++++++.++++..+++.+ .+++. +|+ +++
T Consensus 159 ~A~~l~--~~g~~Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~ 230 (310)
T 1fl2_A 159 AAIDLA--GIVEHVTLLEFAPEMK--AD----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIE 230 (310)
T ss_dssp HHHHHH--TTBSEEEEECSSSSCC--SC----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEE
T ss_pred HHHHHH--HhCCEEEEEEeCcccC--cc----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEE
Confidence 999998 5688999999887652 22 345666776 699999999999998665543 45543 353 789
Q ss_pred ecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 208 ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 208 ~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
+|.||+|+|+.|+.+++... +.++++|++.||++++| +.|+||++|||++.+.
T Consensus 231 ~D~vi~a~G~~p~~~~l~~~---l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~~ 283 (310)
T 1fl2_A 231 LAGIFVQIGLLPNTNWLEGA---VERNRMGEIIIDAKCET-NVKGVFAAGDCTTVPY 283 (310)
T ss_dssp CSEEEECSCEEESCGGGTTT---SCBCTTSCBCCCTTCBC-SSTTEEECSTTBSCSS
T ss_pred cCEEEEeeCCccCchHHhcc---ccccCCCcEEcCCCCcc-CCCCEEEeecccCCcc
Confidence 99999999999998888652 35678899999999997 8999999999998763
No 71
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.96 E-value=3.9e-29 Score=204.77 Aligned_cols=240 Identities=17% Similarity=0.208 Sum_probs=162.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeec-CCccc----cceeee-ccccc--cccEEEE
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV-EPSFG----KRSVIN-HTDYL--VNGRIVA 81 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~-~~~~~----~~~~~~-~~~~~--~~~~~~~ 81 (274)
.+++||+|||||++|+++|+.|+ .|++|+|+|+. .+|+.+....... .+.+. ...... ..++. .++++..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~ 90 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRM 90 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEEC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEE
Confidence 34689999999999999999997 49999999976 4454432211100 00010 000000 00111 1345544
Q ss_pred EeeEEEec-C--eE-EeCCCeEEecCEEEEccCCCCCCChhHHHH----------------------HHHccCCchhhhH
Q 023975 82 SPAINITE-N--EV-LTAEGRRVVYDYLVIATGHKDPVPKTRTER----------------------LNQYQAGPTGVEL 135 (274)
Q Consensus 82 ~~~~~~~~-~--~v-~~~~~~~~~~~~li~a~G~~~~~~~~~~~~----------------------~~~~~~g~~~~e~ 135 (274)
..+..++. + .+ .++++..+.||++|+|+|..|..|+++... +..+++|.+++|+
T Consensus 91 ~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~ 170 (335)
T 2a87_A 91 EDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEE 170 (335)
T ss_dssp CCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHH
T ss_pred eeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHH
Confidence 44444432 2 46 677788899999999999876555432211 1113348899999
Q ss_pred HHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHH-HHHHhCCcEEEcCceeeeeccCCCceeEECC---CC--cEEeec
Q 023975 136 AGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTR-DWLISKKVDVKLGERVNLDSVSEGSDTYLTS---TG--DTINAD 209 (274)
Q Consensus 136 a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~---~g--~~~~~d 209 (274)
|..+. ..+.+++++.+.+.+.. . +.+. +.+++.||++++++.+.+++.+++...+.+. +| +++++|
T Consensus 171 a~~l~--~~g~~V~l~~~~~~~~~--~----~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D 242 (335)
T 2a87_A 171 ATFLT--RFARSVTLVHRRDEFRA--S----KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVT 242 (335)
T ss_dssp HHHHT--TTCSEEEEECSSSSCSS--C----TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCS
T ss_pred HHHHH--HhCCeEEEEEcCCcCCc--c----HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecC
Confidence 99998 56889999998876532 1 2233 3456789999999999999876543344443 34 579999
Q ss_pred EEEEcccCCCCchhhcccccccccCCCCcEEeCCC-ccccCCCCeEEeccccCCC
Q 023975 210 CHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 210 ~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~-~~~~~~~~i~~~Gd~~~~~ 263 (274)
.||+|+|+.|+.+++. .++ .++++|++.||++ +++ +.|+||++|||++.+
T Consensus 243 ~vi~a~G~~p~~~~~~-~~l--~~~~~G~i~vd~~~~~t-~~~~iya~GD~~~~~ 293 (335)
T 2a87_A 243 GVFVAIGHEPRSGLVR-EAI--DVDPDGYVLVQGRTTST-SLPGVFAAGDLVDRT 293 (335)
T ss_dssp CEEECSCEEECCTTTB-TTB--CBCTTSCBCCSTTSSBC-SSTTEEECGGGTCCS
T ss_pred EEEEccCCccChhHhh-ccc--ccCCCccEEeCCCCCcc-CCCCEEEeeecCCcc
Confidence 9999999999988876 333 5677899999986 566 899999999999864
No 72
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.96 E-value=3.3e-29 Score=212.05 Aligned_cols=247 Identities=21% Similarity=0.201 Sum_probs=167.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh----cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEEeeEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ----FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVASPAIN 86 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~----~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 86 (274)
++||+|||||++|+++|..|+ +|++|+|||+++.+.+.+....................+++ .+++++...+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~ 83 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQ 83 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEE
Confidence 479999999999999999996 48999999999876543321110001111111222222222 256777666666
Q ss_pred Eec--CeEEeCCCeEEecCEEEEccCCCCCC---ChhH-----------HH---H----HHH---------ccCCchh--
Q 023975 87 ITE--NEVLTAEGRRVVYDYLVIATGHKDPV---PKTR-----------TE---R----LNQ---------YQAGPTG-- 132 (274)
Q Consensus 87 ~~~--~~v~~~~~~~~~~~~li~a~G~~~~~---~~~~-----------~~---~----~~~---------~~~g~~~-- 132 (274)
++. +.+.++++.++.||++|+|+|..+.. |+.. .. . +.. +++|..+
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~ 163 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASC 163 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCC
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCc
Confidence 764 37888888889999999999998543 2211 11 1 111 1223332
Q ss_pred ----hhHHHHhhhh--CCCC----e-EEEEeCCCccCCc---CChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeE
Q 023975 133 ----VELAGEIAVD--FPEK----K-VTLVHKGSRLLEF---IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTY 198 (274)
Q Consensus 133 ----~e~a~~l~~~--~~~~----~-v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v 198 (274)
+|+|..+... ..+. + ++++.+.+.+.+. ..+.....+.+.+++.||++++++.|++++.+ .+.+
T Consensus 164 ~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~--~v~~ 241 (437)
T 3sx6_A 164 FGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDN--KMYV 241 (437)
T ss_dssp CHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEETT--EEEE
T ss_pred CcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEECC--eEEE
Confidence 7777544321 2233 3 9999998876321 11347788889999999999999999999743 3333
Q ss_pred E--CCC-----CcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 199 L--TST-----GDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 199 ~--~~~-----g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
. ..+ ++++++|.+++++|+.++..+....++ .+++|++.||++++++++|+||++|||+..+.
T Consensus 242 ~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl---~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~ 311 (437)
T 3sx6_A 242 TQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL---CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPP 311 (437)
T ss_dssp EEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT---BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCC
T ss_pred EecccCCccccceEEEEeEEEEcCCCcCchhhhccccc---cCCCCcEEeChhccCCCCCCEEEEEEEeccCC
Confidence 2 233 457999999999998886554443454 57889999999999988999999999998764
No 73
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.96 E-value=4.8e-29 Score=206.89 Aligned_cols=248 Identities=17% Similarity=0.237 Sum_probs=166.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCceeeccceee---ecCCcccc-----------------------
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWASLRA---MVEPSFGK----------------------- 64 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~~g~~~~~~~~---~~~~~~~~----------------------- 64 (274)
++||+|||||++|+++|+.|+ .|+ +|+|||+++ +|+.|..... ...+.+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 479999999999999999997 498 999999988 6654422110 00000000
Q ss_pred -----ceeeec-cccc--cccEEEEE-eeEEEecC----eEEeCCCeEEecCEEEEccCCC--CCCCh---h--------
Q 023975 65 -----RSVINH-TDYL--VNGRIVAS-PAINITEN----EVLTAEGRRVVYDYLVIATGHK--DPVPK---T-------- 118 (274)
Q Consensus 65 -----~~~~~~-~~~~--~~~~~~~~-~~~~~~~~----~v~~~~~~~~~~~~li~a~G~~--~~~~~---~-------- 118 (274)
..+..+ ..+. .++++... .+..++.. .+.+.++ .+.||++|+|+|.. |.+|+ .
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~p~ip~~~~~~~~~~~~~ 161 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNFPKKPFKYGIHYSEIEDF 161 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTSBCCCSSSCEEGGGCSCG
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCccCCCCCceechhhcCCh
Confidence 000000 0011 13444433 23334322 4556555 68999999999986 44443 0
Q ss_pred ---HHHHHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC-------cCChhHHHHHHHHHHhCC-cEEEcCceee
Q 023975 119 ---RTERLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-------FIGPKAGDKTRDWLISKK-VDVKLGERVN 187 (274)
Q Consensus 119 ---~~~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g-v~i~~~~~v~ 187 (274)
..+.+..+++|.+++|+|..+. ..+.+++++.+.+.+.+ ...+.+.+.+.+.+++.| |+++.++.|.
T Consensus 162 ~~~~~~~vvVvG~G~~g~e~a~~l~--~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~ 239 (369)
T 3d1c_A 162 DNFNKGQYVVIGGNESGFDAAYQLA--KNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVK 239 (369)
T ss_dssp GGSCSSEEEEECCSHHHHHHHHHHH--HTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEE
T ss_pred hhcCCCEEEEECCCcCHHHHHHHHH--hcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEE
Confidence 0112333455899999999998 45889999999877653 134556678888888897 9999999999
Q ss_pred eeccCCCceeEECCCCcEEe-ecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCCC
Q 023975 188 LDSVSEGSDTYLTSTGDTIN-ADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 188 ~i~~~~~~~~v~~~~g~~~~-~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
+++.+++...+.+.+|+++. +|.||+|+|+.|+.+++...++ . +++|++.||+.++.++.|+||++|||+..+...
T Consensus 240 ~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~--~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~ 316 (369)
T 3d1c_A 240 DIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLF--V-TTNQDIKLTTHDESTRYPNIFMIGATVENDNAK 316 (369)
T ss_dssp EEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHS--C-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCC
T ss_pred EEEecCCceEEEecCCeEeccCCceEEeeccCCccchhhhhhc--c-CCCCCEEechhhcccCCCCeEEeccccccCCee
Confidence 99755566678888887665 5999999999998866664443 3 678889999874444899999999999877654
Q ss_pred C
Q 023975 267 S 267 (274)
Q Consensus 267 ~ 267 (274)
.
T Consensus 317 ~ 317 (369)
T 3d1c_A 317 L 317 (369)
T ss_dssp C
T ss_pred E
Confidence 3
No 74
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.95 E-value=2e-28 Score=200.39 Aligned_cols=238 Identities=16% Similarity=0.204 Sum_probs=160.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcC----CCCceeeccceeeec-CCcccc----ceee-eccccc--cccEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDP----KEYFEITWASLRAMV-EPSFGK----RSVI-NHTDYL--VNGRI 79 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~----~~~~g~~~~~~~~~~-~~~~~~----~~~~-~~~~~~--~~~~~ 79 (274)
++||+|||||++|+++|+.|+ .|++|+|+|+ ....++.+....... .+.+.. ..+. ...+.. .++++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~ 87 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTI 87 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEE
Confidence 479999999999999999997 4999999999 444444332211100 001100 0000 000111 13455
Q ss_pred EEEeeEEEec--C--eEEeCCCeEEecCEEEEccCCCCCCCh---hHH-------------HHH------------HHcc
Q 023975 80 VASPAINITE--N--EVLTAEGRRVVYDYLVIATGHKDPVPK---TRT-------------ERL------------NQYQ 127 (274)
Q Consensus 80 ~~~~~~~~~~--~--~v~~~~~~~~~~~~li~a~G~~~~~~~---~~~-------------~~~------------~~~~ 127 (274)
....+..++. + .+.+ ++..+.++++|+|+|..+..|+ ... ... ..++
T Consensus 88 ~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG 166 (333)
T 1vdc_A 88 FTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIG 166 (333)
T ss_dssp ECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEEC
T ss_pred EEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEEC
Confidence 5444444442 2 4555 6778999999999998754332 111 011 1133
Q ss_pred CCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHH-HHHHhCCcEEEcCceeeeeccCCC--ce-eEECC--
Q 023975 128 AGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTR-DWLISKKVDVKLGERVNLDSVSEG--SD-TYLTS-- 201 (274)
Q Consensus 128 ~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~-- 201 (274)
+|.+++|+|..+. ..+.+++++.+.+.+.. .+.+. +.+++.||++++++.+.+++.+++ .+ .+.+.
T Consensus 167 ~G~~g~e~A~~l~--~~g~~V~lv~~~~~~~~------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~ 238 (333)
T 1vdc_A 167 GGDSAMEEANFLT--KYGSKVYIIHRRDAFRA------SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV 238 (333)
T ss_dssp CSHHHHHHHHHHT--TTSSEEEEECSSSSCCS------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET
T ss_pred CChHHHHHHHHHH--hcCCeEEEEecCCcCCc------cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEec
Confidence 4889999999998 56889999998876532 23333 445678999999999999987653 32 24443
Q ss_pred -CC--cEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCC-ccccCCCCeEEeccccCCC
Q 023975 202 -TG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 202 -~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~-~~~~~~~~i~~~Gd~~~~~ 263 (274)
+| +++++|.||+|+|+.|+.+++. .++ .++++|++.||++ ++| +.|+||++|||++.+
T Consensus 239 ~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l--~~~~~G~i~vd~~~~~t-~~~~vya~GD~~~~~ 300 (333)
T 1vdc_A 239 VTGDVSDLKVSGLFFAIGHEPATKFLD-GGV--ELDSDGYVVTKPGTTQT-SVPGVFAAGDVQDKK 300 (333)
T ss_dssp TTCCEEEEECSEEEECSCEEESCGGGT-TSS--CBCTTSCBCCCTTSCBC-SSTTEEECGGGGCSS
T ss_pred CCCceEEEecCEEEEEeCCccchHHhh-ccc--cccCCCCEEechhhccc-CCCCEEEeeeccCCC
Confidence 45 5799999999999999988876 233 5677899999987 566 899999999999875
No 75
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.95 E-value=3.1e-28 Score=209.97 Aligned_cols=239 Identities=21% Similarity=0.250 Sum_probs=165.5
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeee---cCCcc-ccceee-eccccc--cccEEEEE-
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM---VEPSF-GKRSVI-NHTDYL--VNGRIVAS- 82 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~---~~~~~-~~~~~~-~~~~~~--~~~~~~~~- 82 (274)
..+||+||||||+|+++|.+|+ +|++|+|+|+. +|+.+...... ..... ....+. ...+.. .++++...
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~ 288 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQ 288 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSC
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCC
Confidence 4689999999999999999997 59999999973 45444321111 00000 000000 000111 13455444
Q ss_pred eeEEEec-------CeEEeCCCeEEecCEEEEccCCCCCC---ChhH-------------------HHHHHHccCCchhh
Q 023975 83 PAINITE-------NEVLTAEGRRVVYDYLVIATGHKDPV---PKTR-------------------TERLNQYQAGPTGV 133 (274)
Q Consensus 83 ~~~~~~~-------~~v~~~~~~~~~~~~li~a~G~~~~~---~~~~-------------------~~~~~~~~~g~~~~ 133 (274)
.+..++. ..+.+++|..+.++++|+|+|..+.. |+.. .+++..+++|.+++
T Consensus 289 ~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~ 368 (521)
T 1hyu_A 289 SASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGV 368 (521)
T ss_dssp CEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHH
T ss_pred EEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHH
Confidence 4444431 25677788889999999999986443 3321 11222345589999
Q ss_pred hHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHh-CCcEEEcCceeeeeccCCCce-eEECC---CCc--EE
Q 023975 134 ELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTS---TGD--TI 206 (274)
Q Consensus 134 e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g~--~~ 206 (274)
|+|..+. ..+.+++++.+.+.+.. + ..+.+.+++ .||++++++.++++..+++.+ .+.+. +|+ ++
T Consensus 369 E~A~~L~--~~g~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i 440 (521)
T 1hyu_A 369 EAAIDLA--GIVEHVTLLEFAPEMKA--D----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSV 440 (521)
T ss_dssp HHHHHHH--HHBSEEEEECSSSSCCS--C----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEE
T ss_pred HHHHHHH--hhCCEEEEEEeCcccCc--C----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEE
Confidence 9999998 45789999998877543 1 355667777 699999999999998765543 45543 353 68
Q ss_pred eecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 207 NADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 207 ~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
++|.||+++|..|+.+++.. . +.++++|++.||++++| +.|+|||+|||++.|.
T Consensus 441 ~~D~vi~a~G~~pn~~~l~~-~--l~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~~~~~ 494 (521)
T 1hyu_A 441 ALAGIFVQIGLLPNTHWLEG-A--LERNRMGEIIIDAKCET-SVKGVFAAGDCTTVPY 494 (521)
T ss_dssp ECSEEEECCCEEESCGGGTT-T--SCBCTTSCBCCCTTCBC-SSTTEEECSTTBCCSS
T ss_pred EcCEEEECcCCCCCchHHhh-h--hccCCCCcEEeCCCCCC-CCCCEEEeecccCCCc
Confidence 99999999999999988875 2 35678899999999998 8999999999998764
No 76
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=4.2e-28 Score=200.11 Aligned_cols=236 Identities=17% Similarity=0.195 Sum_probs=149.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeec----C------Ccccc----------ceeeec-
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV----E------PSFGK----------RSVINH- 70 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~----~------~~~~~----------~~~~~~- 70 (274)
++||+|||||++|+++|+.|+ +|++|+|+|+.+.+|+.|....... . +.+.. ..+..+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 379999999999999999997 5999999999998887765311000 0 00000 000000
Q ss_pred cccc--cccEEEE-EeeEEEe--cC--e-EEeCCCeEEecCEEEEccCC--CC---CCChhH------------------
Q 023975 71 TDYL--VNGRIVA-SPAINIT--EN--E-VLTAEGRRVVYDYLVIATGH--KD---PVPKTR------------------ 119 (274)
Q Consensus 71 ~~~~--~~~~~~~-~~~~~~~--~~--~-v~~~~~~~~~~~~li~a~G~--~~---~~~~~~------------------ 119 (274)
.++. .++++.. ..+..++ .+ . +.++++ .+.||++|+|+|. .| .+|+..
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAPF 161 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGGG
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCChhhc
Confidence 0000 1223322 2233332 33 3 667776 8999999999995 33 333321
Q ss_pred -HHHHHHccCCchhhhHHHHhhhhCCCCeEEEEeCC-CccCCcC--ChhHHHHHHHHHH---------------------
Q 023975 120 -TERLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKG-SRLLEFI--GPKAGDKTRDWLI--------------------- 174 (274)
Q Consensus 120 -~~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~--------------------- 174 (274)
.+++..+++|.+++|+|..+. ..+ +++++.+. +.+.+.. ...+...+.+.+.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~--~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVS--TVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMV 238 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHT--TTS-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCC
T ss_pred CCCEEEEECCCcCHHHHHHHHH--hhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccC
Confidence 112223445999999999998 334 68998887 4444422 2223322222222
Q ss_pred -------hCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCC--c
Q 023975 175 -------SKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDEN--L 245 (274)
Q Consensus 175 -------~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~--~ 245 (274)
+.|+ +..+..+.++.. ..+.+.+|+++++|.||+|+|+.|+.+++...++ . +++|++.||++ +
T Consensus 239 ~~~~~~~~~g~-i~~~~~v~~~~~----~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl--~-~~~G~i~vd~~~l~ 310 (357)
T 4a9w_A 239 PPVLDARARGV-LAAVPPPARFSP----TGMQWADGTERAFDAVIWCTGFRPALSHLKGLDL--V-TPQGQVEVDGSGLR 310 (357)
T ss_dssp HHHHHHHHTTC-CCEECCCSEEET----TEEECTTSCEEECSEEEECCCBCCCCGGGTTTTC--B-CTTSCBCBCTTSCB
T ss_pred hhHHHHHhcCc-eEEecCcceEeC----CeeEECCCCEecCCEEEECCCcCCCCcccCcccc--c-CCCCCccccCCccc
Confidence 2333 334444555542 2478889999999999999999999999987776 3 67899999999 7
Q ss_pred cccCCCCeEEec--cccC
Q 023975 246 RVKGQKNIFAIG--DITD 261 (274)
Q Consensus 246 ~~~~~~~i~~~G--d~~~ 261 (274)
++ +.|+||++| ||++
T Consensus 311 ~t-~~~~vya~Gd~d~~~ 327 (357)
T 4a9w_A 311 AL-AVPSVWLLGYGDWNG 327 (357)
T ss_dssp BS-SCTTEEECSSCGGGS
T ss_pred CC-CCCCeEEeccccccc
Confidence 77 899999999 6665
No 77
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.94 E-value=3e-27 Score=201.73 Aligned_cols=246 Identities=15% Similarity=0.201 Sum_probs=156.4
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-C-----CcEEEEcCCCCceeeccceee--ecC------------Cc--ccc------
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-S-----ADVTLIDPKEYFEITWASLRA--MVE------------PS--FGK------ 64 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g-----~~v~vie~~~~~g~~~~~~~~--~~~------------~~--~~~------ 64 (274)
.+||+|||||++|+++|..|++ | .+|+|||+.+.+|+....+.. .+. +. +..
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~ 109 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHK 109 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhh
Confidence 4699999999999999999974 7 999999999988743322100 000 00 000
Q ss_pred ----------cee-ee---ccccc----c--ccEEEE-EeeEEEe-----cC----eEEeCCCe----EEecCEEEEccC
Q 023975 65 ----------RSV-IN---HTDYL----V--NGRIVA-SPAINIT-----EN----EVLTAEGR----RVVYDYLVIATG 110 (274)
Q Consensus 65 ----------~~~-~~---~~~~~----~--~~~~~~-~~~~~~~-----~~----~v~~~~~~----~~~~~~li~a~G 110 (274)
... .. +.+++ . +..+.. ..+..++ .+ .+.+.++. ++.||+||+|||
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG 189 (463)
T 3s5w_A 110 HDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPG 189 (463)
T ss_dssp TTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCC
T ss_pred cCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCC
Confidence 000 00 00000 0 122222 1222222 11 45555554 789999999999
Q ss_pred CCCCCChh-H---H-----------HHHHH-------------ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCC
Q 023975 111 HKDPVPKT-R---T-----------ERLNQ-------------YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIG 162 (274)
Q Consensus 111 ~~~~~~~~-~---~-----------~~~~~-------------~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~ 162 (274)
..|.+|.. . . ..+.. +++|.+|+|+|..|...+++.+|+++.+.+.+.+..+
T Consensus 190 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~ 269 (463)
T 3s5w_A 190 GTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADD 269 (463)
T ss_dssp CEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCC
T ss_pred CCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccC
Confidence 98776651 1 0 11211 3448999999999997667899999999887655221
Q ss_pred --------------------hhHHHHHHHHHHh--------------------------CCcEEEcCceeeeeccCCCce
Q 023975 163 --------------------PKAGDKTRDWLIS--------------------------KKVDVKLGERVNLDSVSEGSD 196 (274)
Q Consensus 163 --------------------~~~~~~~~~~~~~--------------------------~gv~i~~~~~v~~i~~~~~~~ 196 (274)
......+.+.+.. .|++++.++.|++++.+++.+
T Consensus 270 ~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~ 349 (463)
T 3s5w_A 270 SPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGI 349 (463)
T ss_dssp CHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEE
T ss_pred CccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEE
Confidence 1111111111111 699999999999998877777
Q ss_pred eEECC---CCc--EEeecEEEEcccCCCC--chhhcccccccccCCCCcEEeCCCccccC----CCCeEEeccccCCC
Q 023975 197 TYLTS---TGD--TINADCHFLCTGKPVG--SDWLKDTILKDSLDTHGMLMVDENLRVKG----QKNIFAIGDITDIR 263 (274)
Q Consensus 197 ~v~~~---~g~--~~~~d~vv~a~G~~~~--~~~~~~~~~~~~~~~~g~~~v~~~~~~~~----~~~i~~~Gd~~~~~ 263 (274)
.+.+. +|+ ++++|.||+|||+.|+ .+++...... . |++.||+++++.. .++||++|||....
T Consensus 350 ~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~--~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~ 422 (463)
T 3s5w_A 350 ELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEY--L---GDHEIGRDYRLQTDERCKVAIYAQGFSQASH 422 (463)
T ss_dssp EEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGG--B---C--CCCTTSBCCBCTTBCSEEEESSCCHHHH
T ss_pred EEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHH--h---CCcccCcccccccCCCCCCeEEEcCCCcccC
Confidence 77665 665 4999999999999998 5666654331 2 7899999998743 45699999998543
No 78
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.94 E-value=5.7e-29 Score=210.55 Aligned_cols=239 Identities=17% Similarity=0.095 Sum_probs=153.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeecCC-ccccceeeecccccc--ccEEEEEeeEE
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEP-SFGKRSVINHTDYLV--NGRIVASPAIN 86 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~ 86 (274)
...+||+||||||+||++|+.|++ |++|+|||+.+.+|+.+.. .+.. ...........+++. ++++.....+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~---gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 196 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVY---GIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG 196 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHH---TSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeee---cCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec
Confidence 346899999999999999999985 9999999999888754321 1110 000011111111111 33333222211
Q ss_pred EecCeEEeCCCeEEecCEEEEccCCC-C---CCChhHH-------HH---------------------------HHHccC
Q 023975 87 ITENEVLTAEGRRVVYDYLVIATGHK-D---PVPKTRT-------ER---------------------------LNQYQA 128 (274)
Q Consensus 87 ~~~~~v~~~~~~~~~~~~li~a~G~~-~---~~~~~~~-------~~---------------------------~~~~~~ 128 (274)
..+.++++ .+.||++++|+|+. + .+|+... +. +..+++
T Consensus 197 ---~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGg 272 (456)
T 2vdc_G 197 ---RDASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGG 272 (456)
T ss_dssp ---TTBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECS
T ss_pred ---cEEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECC
Confidence 12222222 36799999999986 3 3333110 00 111234
Q ss_pred CchhhhHHHHhhhhCCCC-eEEEEeCCCcc-CCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCc--eeEE---C-
Q 023975 129 GPTGVELAGEIAVDFPEK-KVTLVHKGSRL-LEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS--DTYL---T- 200 (274)
Q Consensus 129 g~~~~e~a~~l~~~~~~~-~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~---~- 200 (274)
|.+++|+|..+. ..++ +|+++.+.+.. ++.... . .+.+++.||++++++.+.++..++.. +.+. +
T Consensus 273 G~~a~d~A~~~~--r~Ga~~Vtiv~r~~~~~~p~~~~----e-~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~ 345 (456)
T 2vdc_G 273 GDTAMDCVRTAI--RQGATSVKCLYRRDRKNMPGSQR----E-VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLG 345 (456)
T ss_dssp SHHHHHHHHHHH--HTTCSEEEEECSSCSTTCSSCHH----H-HHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEE
T ss_pred ChhHHHHHHHHH--HcCCCEEEEEEeCCccCCCCCHH----H-HHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEec
Confidence 889999998877 3455 69999988764 333221 2 34577889999999998888643211 2221 1
Q ss_pred ---C---------CC--cEEeecEEEEcccCCCCch--hhcccccccccCCCCcEEeCCC-ccccCCCCeEEeccccCCC
Q 023975 201 ---S---------TG--DTINADCHFLCTGKPVGSD--WLKDTILKDSLDTHGMLMVDEN-LRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 201 ---~---------~g--~~~~~d~vv~a~G~~~~~~--~~~~~~~~~~~~~~g~~~v~~~-~~~~~~~~i~~~Gd~~~~~ 263 (274)
. +| .++++|.||+|+|+.|+.. ++...++ .++++|++.||+. ++| +.|+|||+|||+..+
T Consensus 346 ~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl--~~~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g~ 422 (456)
T 2vdc_G 346 VADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPEL--KVTRWGTLLVDHRTKMT-NMDGVFAAGDIVRGA 422 (456)
T ss_dssp EEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTS--CBCTTSSBCCCTTTCBC-SSTTEEECGGGGSSC
T ss_pred ccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCe--eECCCCCEEECCCCCcC-CCCCEEEeccccCCc
Confidence 1 23 3789999999999999865 6666555 5778899999997 898 899999999999876
Q ss_pred CCC
Q 023975 264 VSA 266 (274)
Q Consensus 264 ~~~ 266 (274)
...
T Consensus 423 ~~v 425 (456)
T 2vdc_G 423 SLV 425 (456)
T ss_dssp CSH
T ss_pred hHH
Confidence 543
No 79
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.92 E-value=1.2e-26 Score=206.44 Aligned_cols=232 Identities=17% Similarity=0.127 Sum_probs=154.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc---cccEEEEEeeEE
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL---VNGRIVASPAIN 86 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 86 (274)
...+||+|||||++||++|+.|++ |++|+|+|+++.+|+.+....................... .++++...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~---- 464 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRE---- 464 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESS----
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEEC----
Confidence 346899999999999999999984 9999999999988865432211111000000000011111 12222111
Q ss_pred EecCeEEeCCCeEEecCEEEEccCCCC-----------CCChhH------HHH-----------HHHcc--CCchhhhHH
Q 023975 87 ITENEVLTAEGRRVVYDYLVIATGHKD-----------PVPKTR------TER-----------LNQYQ--AGPTGVELA 136 (274)
Q Consensus 87 ~~~~~v~~~~~~~~~~~~li~a~G~~~-----------~~~~~~------~~~-----------~~~~~--~g~~~~e~a 136 (274)
..+..+++..+.||++++|||..+ .+|+.. ... +..++ +|.+++|+|
T Consensus 465 ---~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A 541 (690)
T 3k30_A 465 ---SPMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVA 541 (690)
T ss_dssp ---CCCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHH
T ss_pred ---CeecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHH
Confidence 123333445678999999999873 233321 111 22234 578999999
Q ss_pred HHhhhhCCCCeEEEEeCCCccCCcCC-hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEE-CCCCcEEeecEEEEc
Q 023975 137 GEIAVDFPEKKVTLVHKGSRLLEFIG-PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYL-TSTGDTINADCHFLC 214 (274)
Q Consensus 137 ~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~-~~~g~~~~~d~vv~a 214 (274)
..+. ..+.+++++.+.+.+.+... +.....+.+.+++.||+++++++|++++.++..+... ..+++++++|.||+|
T Consensus 542 ~~L~--~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A 619 (690)
T 3k30_A 542 ELLA--QKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMV 619 (690)
T ss_dssp HHHH--HTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEE
T ss_pred HHHH--hCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEEC
Confidence 9998 56889999999888766433 4567888899999999999999999997543222222 235568999999999
Q ss_pred ccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCCC
Q 023975 215 TGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 215 ~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~~ 265 (274)
+|+.|+..++...+. .+. ++ +.++||++|||++.+..
T Consensus 620 ~G~~p~~~l~~~l~~------~~~-------~t-~~~~VyaiGD~~~~~~~ 656 (690)
T 3k30_A 620 TARLPREELYLDLVA------RRD-------AG-EIASVRGIGDAWAPGTI 656 (690)
T ss_dssp SCEEECCHHHHHHHH------HHH-------HT-SCSEEEECGGGTSCBCH
T ss_pred CCCCCChHHHHHHhh------hhc-------cc-CCCCEEEEeCCCchhhH
Confidence 999999887765332 111 55 79999999999986543
No 80
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.92 E-value=5e-25 Score=187.49 Aligned_cols=227 Identities=15% Similarity=0.184 Sum_probs=146.3
Q ss_pred CcEEEEcCChHHHHHHHHhh----cCCc---EEEEcCCCCceeeccceeee-------------cC---C----c---cc
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ----FSAD---VTLIDPKEYFEITWASLRAM-------------VE---P----S---FG 63 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~----~g~~---v~vie~~~~~g~~~~~~~~~-------------~~---~----~---~~ 63 (274)
+||+|||||++|+++|..|+ .|++ |+|||+.+.+|+.|...... .. . . +.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 69999999999999999985 5899 99999999888776532100 00 0 0 00
Q ss_pred c-----------ceeeecc-------cccc--ccE--EE-EEeeEEEe--cC----eEEeCC---C--eEEecCEEEEcc
Q 023975 64 K-----------RSVINHT-------DYLV--NGR--IV-ASPAINIT--EN----EVLTAE---G--RRVVYDYLVIAT 109 (274)
Q Consensus 64 ~-----------~~~~~~~-------~~~~--~~~--~~-~~~~~~~~--~~----~v~~~~---~--~~~~~~~li~a~ 109 (274)
. ..+.... ++.. ++. +. ...+..+. .. .|.+.+ + .++.||+||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 0 0000000 0000 111 21 22333332 22 455443 3 578999999999
Q ss_pred C--CCCCCChhH----------------------HHHHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhH
Q 023975 110 G--HKDPVPKTR----------------------TERLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKA 165 (274)
Q Consensus 110 G--~~~~~~~~~----------------------~~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~ 165 (274)
| +.|.+|.++ .+++..+++|.+|+|+|..+. ..+.+++++.+.+.+++...
T Consensus 163 G~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~--~~g~~V~li~~~~~~~~~~~--- 237 (464)
T 2xve_A 163 GHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCY--KYGAKKLISCYRTAPMGYKW--- 237 (464)
T ss_dssp CSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHH--HTTCSEEEEECSSCCCCCCC---
T ss_pred CCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHH--HhCCeEEEEEECCCCCCCCC---
Confidence 9 565544321 112223445999999999998 56889999998877654211
Q ss_pred HHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcE--EeCC
Q 023975 166 GDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGML--MVDE 243 (274)
Q Consensus 166 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~--~v~~ 243 (274)
..||+++ ..|++++. + .|.+.+|+++++|.||+|||+.|+.+++.. .+++.++.++++ ....
T Consensus 238 ---------~~~V~~~--~~V~~i~~--~--~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~-~~gl~~~~~~~v~~~~~~ 301 (464)
T 2xve_A 238 ---------PENWDER--PNLVRVDT--E--NAYFADGSSEKVDAIILCTGYIHHFPFLND-DLRLVTNNRLWPLNLYKG 301 (464)
T ss_dssp ---------CTTEEEC--SCEEEECS--S--EEEETTSCEEECSEEEECCCBCCCCTTBCT-TTCCCCCSSSCCSSEETT
T ss_pred ---------CCceEEc--CCeEEEeC--C--EEEECCCCEEeCCEEEECCCCCCCCCCcCc-ccccccCCCcccccccce
Confidence 2477776 67888853 2 477889999999999999999999998875 222345555455 1122
Q ss_pred CccccCCCCeEEeccccCC
Q 023975 244 NLRVKGQKNIFAIGDITDI 262 (274)
Q Consensus 244 ~~~~~~~~~i~~~Gd~~~~ 262 (274)
.+++ +.|+||++|||+..
T Consensus 302 ~~~t-~~p~i~aiGd~~~~ 319 (464)
T 2xve_A 302 VVWE-DNPKFFYIGMQDQW 319 (464)
T ss_dssp TEES-SSTTEEECSCSCCS
T ss_pred EecC-CCCCEEEEeCcccc
Confidence 3556 79999999998864
No 81
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.92 E-value=4.7e-26 Score=209.82 Aligned_cols=239 Identities=18% Similarity=0.201 Sum_probs=156.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCceeeccceeeecCCcccc--ceeeeccccc--cccEEEEEeeE
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWASLRAMVEPSFGK--RSVINHTDYL--VNGRIVASPAI 85 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~ 85 (274)
..+||+||||||||+++|..|+ .|+ +|+|||+.+.+|+.+. +.+ +.+.. .......+++ .++++.....+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~---~~i-p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 261 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLST---SEI-PQFRLPYDVVNFEIELMKDLGVKIICGKSL 261 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHH---HTS-CTTTSCHHHHHHHHHHHHTTTCEEEESCCB
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccc---ccC-CcccCCHHHHHHHHHHHHHCCcEEEcccEe
Confidence 3579999999999999999997 499 7999999988875421 111 11100 0000001111 14555444333
Q ss_pred EEecCeEEeCCCeEEecCEEEEccCCC-CCCCh----hH-------HHH-HH-------------------------Hcc
Q 023975 86 NITENEVLTAEGRRVVYDYLVIATGHK-DPVPK----TR-------TER-LN-------------------------QYQ 127 (274)
Q Consensus 86 ~~~~~~v~~~~~~~~~~~~li~a~G~~-~~~~~----~~-------~~~-~~-------------------------~~~ 127 (274)
. .+.+.++++..+.||++++|||+. |..++ .+ ... +. .++
T Consensus 262 ~--~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIG 339 (1025)
T 1gte_A 262 S--ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLG 339 (1025)
T ss_dssp S--TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEEC
T ss_pred c--cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEEC
Confidence 2 123444444457899999999984 54321 11 010 11 234
Q ss_pred CCchhhhHHHHhhhhCCCC-eEEEEeCCCc-cCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEECC---
Q 023975 128 AGPTGVELAGEIAVDFPEK-KVTLVHKGSR-LLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTS--- 201 (274)
Q Consensus 128 ~g~~~~e~a~~l~~~~~~~-~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~--- 201 (274)
+|.+|+|+|..+. ..+. +|+++.+.+. .++..+.. .+.+++.||+++.++.+.++..+++.+ .+++.
T Consensus 340 gG~~g~e~A~~~~--~~G~~~Vtvv~r~~~~~~~~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~ 412 (1025)
T 1gte_A 340 AGDTAFDCATSAL--RCGARRVFLVFRKGFVNIRAVPEE-----VELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTE 412 (1025)
T ss_dssp SSHHHHHHHHHHH--HTTCSEEEEECSSCGGGCCSCHHH-----HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CChHHHHHHHHHH--HcCCCEEEEEEecChhhCCCCHHH-----HHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeE
Confidence 5899999999887 4565 8999998873 33433222 246778899999999998887544432 23321
Q ss_pred ---CC---------cEEeecEEEEcccCCC-Cchhhcc-cccccccCCCCcEEeCC-CccccCCCCeEEeccccCCCCCC
Q 023975 202 ---TG---------DTINADCHFLCTGKPV-GSDWLKD-TILKDSLDTHGMLMVDE-NLRVKGQKNIFAIGDITDIRVSA 266 (274)
Q Consensus 202 ---~g---------~~~~~d~vv~a~G~~~-~~~~~~~-~~~~~~~~~~g~~~v~~-~~~~~~~~~i~~~Gd~~~~~~~~ 266 (274)
+| .++++|.||+|+|..| +..++.. .++ .++++|++.||+ +++| +.|+|||+|||++.+...
T Consensus 413 ~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl--~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~~~~~ 489 (1025)
T 1gte_A 413 QDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPI--KFNRWDLPEVDPETMQT-SEPWVFAGGDIVGMANTT 489 (1025)
T ss_dssp ECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTS--CBCTTSSBCCCTTTCBC-SSTTEEECSGGGCSCCCH
T ss_pred EcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCc--eECCCCCEEECCCCCcc-CCCCEEEeCCCCCCchHH
Confidence 22 3689999999999976 4555554 244 567889999997 7998 899999999999866543
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.92 E-value=5.3e-26 Score=192.67 Aligned_cols=239 Identities=15% Similarity=0.113 Sum_probs=153.8
Q ss_pred CCcEEEEcCChHHHHHHHHhhc--------CCcEEEEcCCCCceeeccceeeecCCcc--ccceeeeccccc--cccEEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF--------SADVTLIDPKEYFEITWASLRAMVEPSF--GKRSVINHTDYL--VNGRIV 80 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~--------g~~v~vie~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~ 80 (274)
.+||+||||||+|+++|..|++ |++|+|||+.+.+++.+. ....+.. .........+++ .++++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~---~gv~p~~~~~~~~~~~~~~~~~~~~v~~~ 79 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR---SGVAPDHPKIKSISKQFEKTAEDPRFRFF 79 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH---HTSCTTCTGGGGGHHHHHHHHTSTTEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc---cccCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 4799999999999999999865 899999999987765432 1111111 001111111111 134444
Q ss_pred EEeeEEEecCeEEeCCCeEEecCEEEEccCCC-C---CCChhH------HHHH----------------------HHccC
Q 023975 81 ASPAINITENEVLTAEGRRVVYDYLVIATGHK-D---PVPKTR------TERL----------------------NQYQA 128 (274)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~~li~a~G~~-~---~~~~~~------~~~~----------------------~~~~~ 128 (274)
.... ++ +.+.++++ .+.||++|+|||+. + .+|+.+ ...+ ..+++
T Consensus 80 ~~v~--v~-~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~ 155 (456)
T 1lqt_A 80 GNVV--VG-EHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGN 155 (456)
T ss_dssp ESCC--BT-TTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECC
T ss_pred eeEE--EC-CEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECC
Confidence 3321 22 23444444 57899999999996 3 344421 1111 11334
Q ss_pred CchhhhHHHHhhhh-------------------CCCCeEEEEeCCCccCCcCC-------------------hhH-----
Q 023975 129 GPTGVELAGEIAVD-------------------FPEKKVTLVHKGSRLLEFIG-------------------PKA----- 165 (274)
Q Consensus 129 g~~~~e~a~~l~~~-------------------~~~~~v~~~~~~~~~~~~~~-------------------~~~----- 165 (274)
|.+++|+|..|... ....+|+++.+...+...+. .++
T Consensus 156 G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~ 235 (456)
T 1lqt_A 156 GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITD 235 (456)
T ss_dssp SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCH
T ss_pred CHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchh
Confidence 88999999988731 12358999998775433221 111
Q ss_pred -------------HHHHHHHHHh------CCcEEEcCceeeeeccCCCceeEECC----------------CC--cEEee
Q 023975 166 -------------GDKTRDWLIS------KKVDVKLGERVNLDSVSEGSDTYLTS----------------TG--DTINA 208 (274)
Q Consensus 166 -------------~~~~~~~~~~------~gv~i~~~~~v~~i~~~~~~~~v~~~----------------~g--~~~~~ 208 (274)
.+.+.+.+++ .||++++++.+.++..++....+++. +| ++++|
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~ 315 (456)
T 1lqt_A 236 EDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPA 315 (456)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEEC
T ss_pred hhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEc
Confidence 2344455555 79999999999999865432234433 34 46999
Q ss_pred cEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 209 DCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 209 d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
|.||+|+|+.|+. + .++ +++++|++.+|+.++.++.|+||++|||+..|.
T Consensus 316 d~vi~a~G~~p~~-l---~gl--~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~ 365 (456)
T 1lqt_A 316 QLVVRSVGYRGVP-T---PGL--PFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPT 365 (456)
T ss_dssp SEEEECSCEECCC-C---TTS--CCBTTTTBCCEETTEETTCSSEEECTHHHHCSC
T ss_pred CEEEEccccccCC-C---CCC--cccCCCCeeECCCCcCCCCCCEEEEeccCCCCc
Confidence 9999999999976 2 233 567788999999999448999999999986554
No 83
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.92 E-value=2.3e-25 Score=190.97 Aligned_cols=233 Identities=18% Similarity=0.151 Sum_probs=150.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeec-CCcccccee-eec-cccccccEEE-EEeeEEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMV-EPSFGKRSV-INH-TDYLVNGRIV-ASPAINI 87 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~-~~~~~~~~~-~~~-~~~~~~~~~~-~~~~~~~ 87 (274)
++||+|||||++|+++|++|+ . ++|+|||+++.+|+.+....... ........+ ... ..+..++++. ...+..+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGV 186 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEECCC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEEEE
Confidence 469999999999999999996 6 99999999998876654321110 000000000 000 0111233332 1222222
Q ss_pred e--cCeE--Ee-CCCe--EEecCEEEEccCCCCCCChhHHHHHHHccCCchhhhHHHHhhh---hCCCCeEEEEeCCCcc
Q 023975 88 T--ENEV--LT-AEGR--RVVYDYLVIATGHKDPVPKTRTERLNQYQAGPTGVELAGEIAV---DFPEKKVTLVHKGSRL 157 (274)
Q Consensus 88 ~--~~~v--~~-~~~~--~~~~~~li~a~G~~~~~~~~~~~~~~~~~~g~~~~e~a~~l~~---~~~~~~v~~~~~~~~~ 157 (274)
+ .+.+ .. +++. .+.||++++|||+.|..|+++...+. +....+-+..+.. ..++.++.++.....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~----gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~- 261 (493)
T 1y56_A 187 FDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMP----GVFRRDFALEVMNVWEVAPGRKVAVTGSKAD- 261 (493)
T ss_dssp EECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTST----TEEEHHHHHHHHHTSCBCSCSEEEEESTTHH-
T ss_pred EcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCC----CEEEcHHHHHHHHhcccCCCCEEEEECCCHH-
Confidence 2 2211 11 3443 68999999999998665543322111 1111121222221 134566666543221
Q ss_pred CCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCC
Q 023975 158 LEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHG 237 (274)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g 237 (274)
.+.+.+++.|+++++++.|.+++.+++...+.+.+|+++++|.||+|+|..|+.+++...++.+.++++|
T Consensus 262 ----------gle~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g 331 (493)
T 1y56_A 262 ----------EVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGY 331 (493)
T ss_dssp ----------HHHHHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTE
T ss_pred ----------HHHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCc
Confidence 2226778899999999999999876655567788888999999999999999999998888766566788
Q ss_pred cEE-eCCCccccCCCCeEEeccccCCC
Q 023975 238 MLM-VDENLRVKGQKNIFAIGDITDIR 263 (274)
Q Consensus 238 ~~~-v~~~~~~~~~~~i~~~Gd~~~~~ 263 (274)
++. +|++++ +.|+||++|||++.+
T Consensus 332 ~i~~vd~~~~--s~~~vya~GD~~~~~ 356 (493)
T 1y56_A 332 YSPVLDEYHR--IKDGIYVAGSAVSIK 356 (493)
T ss_dssp EEECCCTTSE--EETTEEECSTTTCCC
T ss_pred eeeccccccC--cCCCEEEEeccCCcc
Confidence 887 899988 689999999999865
No 84
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.91 E-value=1.9e-26 Score=205.82 Aligned_cols=231 Identities=19% Similarity=0.163 Sum_probs=150.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeecccccc-ccEEE---EEeeE
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV-NGRIV---ASPAI 85 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~ 85 (274)
...+||+|||||++|+++|+.|+ +|++|+|||+.+.+|+.+........ .. .+....+++. .++.. ....+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg--~~--~~~~~~~~~~~~i~~~~~~~~~~v 462 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPG--LG--EWSYHRDYRETQITKLLKKNKESQ 462 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTT--CG--GGHHHHHHHHHHHHHHHHHSTTCE
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCC--hH--HHHHHHHHHHHHHHHhhcccCCce
Confidence 34689999999999999999997 59999999999988765432211100 00 0000000100 00000 00011
Q ss_pred EEe-cCeEEeCCCeEEecCEEEEccCCCC--------C---CChhH--------HH-----------HHHHcc--CCchh
Q 023975 86 NIT-ENEVLTAEGRRVVYDYLVIATGHKD--------P---VPKTR--------TE-----------RLNQYQ--AGPTG 132 (274)
Q Consensus 86 ~~~-~~~v~~~~~~~~~~~~li~a~G~~~--------~---~~~~~--------~~-----------~~~~~~--~g~~~ 132 (274)
.+. ...+.++++..+.||++|+|||+.+ . +|+.. .. ++..++ +|.++
T Consensus 463 ~i~~~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g 542 (729)
T 1o94_A 463 LALGQKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMA 542 (729)
T ss_dssp EECSCCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHH
T ss_pred EEEeCeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchH
Confidence 221 1234444455688999999999872 2 33321 11 111133 57899
Q ss_pred hhHHHHhhhhCCCCeEEEEeCCCccCCc--CChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEE--CCCC-cE--
Q 023975 133 VELAGEIAVDFPEKKVTLVHKGSRLLEF--IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYL--TSTG-DT-- 205 (274)
Q Consensus 133 ~e~a~~l~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~--~~~g-~~-- 205 (274)
+|+|..+. ..+.+|+++.+.+ +.+. .+.. ...+.+.+++.||++++++.++++..+ .+.+. +.++ ++
T Consensus 543 ~e~A~~l~--~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~--~v~~~~~~~~~~~~~~ 616 (729)
T 1o94_A 543 PSLAEKLA--TAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPG--RMEIYNIWGDGSKRTY 616 (729)
T ss_dssp HHHHHHHH--HTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETT--EEEEEETTCSCSCCCC
T ss_pred HHHHHHHH--HcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECC--eEEEEEecCCceEEec
Confidence 99999998 5688999999988 5441 2222 466778889999999999999999743 33332 2333 22
Q ss_pred ----------------EeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCC
Q 023975 206 ----------------INADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDI 262 (274)
Q Consensus 206 ----------------~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~ 262 (274)
++||.||+|+|..|+.+++..... .+|++++| +.++||++|||++.
T Consensus 617 ~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~----------~vd~~~~t-~~~~VyAiGD~~~~ 678 (729)
T 1o94_A 617 RGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKA----------RESEWAEN-DIKGIYLIGDAEAP 678 (729)
T ss_dssp CCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHH----------TGGGTGGG-TCCEEEECGGGTSC
T ss_pred ccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHhh----------hccccccc-CCCCeEEEeCccch
Confidence 999999999999999887754221 15778888 89999999999974
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.91 E-value=3.9e-25 Score=202.45 Aligned_cols=233 Identities=17% Similarity=0.158 Sum_probs=153.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecccee-eecCCccccceeeecc-cc--ccccEEEEE-eeEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR-AMVEPSFGKRSVINHT-DY--LVNGRIVAS-PAIN 86 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~-~~--~~~~~~~~~-~~~~ 86 (274)
++||+||||||||+++|..|+ .|++|+|||+++.+|+.+.... ..+............. .+ +.++++... .+..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 479999999999999999997 5999999999988886554210 1111000000000000 00 113333321 2222
Q ss_pred EecC-------------eEEe------CCCeEEecCEEEEccCCCCCC---ChhH---------HHH-HH----------
Q 023975 87 ITEN-------------EVLT------AEGRRVVYDYLVIATGHKDPV---PKTR---------TER-LN---------- 124 (274)
Q Consensus 87 ~~~~-------------~v~~------~~~~~~~~~~li~a~G~~~~~---~~~~---------~~~-~~---------- 124 (274)
++.. .+.. .++..+.||++|+|||+.|.. |+.+ ... +.
T Consensus 208 i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~v 287 (965)
T 2gag_A 208 SYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARI 287 (965)
T ss_dssp EETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSE
T ss_pred eecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeE
Confidence 2211 1111 112468999999999987543 3211 111 11
Q ss_pred -HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccC-CCc-eeEECC
Q 023975 125 -QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVS-EGS-DTYLTS 201 (274)
Q Consensus 125 -~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~ 201 (274)
.+++|.+++|+|..+. ..+.+++++.+.+.+.+ . .+.+++.||++++++.+.+++.+ ++. ..+++.
T Consensus 288 vViGgG~~g~E~A~~L~--~~G~~Vtvv~~~~~~~~-------~--~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~ 356 (965)
T 2gag_A 288 AVATTNDSAYELVRELA--ATGGVVAVIDARSSISA-------A--AAQAVADGVQVISGSVVVDTEADENGELSAIVVA 356 (965)
T ss_dssp EEEESSTTHHHHHHHHG--GGTCCSEEEESCSSCCH-------H--HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEE
T ss_pred EEEcCCHHHHHHHHHHH--HcCCcEEEEECCCccch-------h--HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEE
Confidence 1234899999999998 45778999999876542 1 56788899999999999999863 232 245444
Q ss_pred C-------C--cEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCcc-----ccCCCCeEEeccccCCCCC
Q 023975 202 T-------G--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLR-----VKGQKNIFAIGDITDIRVS 265 (274)
Q Consensus 202 ~-------g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-----~~~~~~i~~~Gd~~~~~~~ 265 (274)
+ | ++++||.||+++|..|+.+++... .+++.+|+.++ + +.|+||++|||++.+..
T Consensus 357 ~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~--------~g~i~vd~~~~~~v~~t-s~p~IyAaGD~a~~~~l 425 (965)
T 2gag_A 357 ELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR--------QGKLDWDTTIHAFVPAD-AVANQHLAGAMTGRLDT 425 (965)
T ss_dssp EECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT--------TCCEEEETTTTEEEECS-CCTTEEECGGGGTCCSH
T ss_pred eccccCCCCceEEEEcCEEEECCCcCcChHHHHhC--------CCcEEEcCcccccccCC-CCCCEEEEEecCCchhH
Confidence 3 4 589999999999999998876542 46788888776 5 89999999999987653
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.91 E-value=2.3e-24 Score=183.01 Aligned_cols=229 Identities=17% Similarity=0.229 Sum_probs=143.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CC--cEEEEcCCCCceeeccceeeec---------------------------CCc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SA--DVTLIDPKEYFEITWASLRAMV---------------------------EPS 61 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~--~v~vie~~~~~g~~~~~~~~~~---------------------------~~~ 61 (274)
+.+||+|||||++|+++|+.|++ |. +|+|||+.+.+|+.|....... ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 45899999999999999999974 88 9999999988876654321000 000
Q ss_pred cc---cc------------------eeeec-------ccccc--ccEE-EEEeeEEEe--cC--eEEeCC---Ce---EE
Q 023975 62 FG---KR------------------SVINH-------TDYLV--NGRI-VASPAINIT--EN--EVLTAE---GR---RV 100 (274)
Q Consensus 62 ~~---~~------------------~~~~~-------~~~~~--~~~~-~~~~~~~~~--~~--~v~~~~---~~---~~ 100 (274)
+. .. .+... .++.. ...+ ....+..+. .. .|.+.+ |. ++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~ 164 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKD 164 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEE
Confidence 00 00 00000 00000 1112 122333332 22 454443 55 78
Q ss_pred ecCEEEEccCC--CCCCChhHH-HH-------------------------HHHccCCchhhhHHHHhhhhCCCCe-EEEE
Q 023975 101 VYDYLVIATGH--KDPVPKTRT-ER-------------------------LNQYQAGPTGVELAGEIAVDFPEKK-VTLV 151 (274)
Q Consensus 101 ~~~~li~a~G~--~~~~~~~~~-~~-------------------------~~~~~~g~~~~e~a~~l~~~~~~~~-v~~~ 151 (274)
.||+||+|+|. .|.+|.++. .. +..+++|.+|+|+|..+. ..+.+ |+++
T Consensus 165 ~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~--~~~~~~V~l~ 242 (447)
T 2gv8_A 165 IFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLT--PVAKHPIYQS 242 (447)
T ss_dssp EESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHT--TTSCSSEEEE
T ss_pred EeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHH--HHhCCcEEEE
Confidence 99999999998 555443221 11 111233899999999998 56777 9999
Q ss_pred eCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcE-EeecEEEEcccCCCCchh-----hc
Q 023975 152 HKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDT-INADCHFLCTGKPVGSDW-----LK 225 (274)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~-~~~d~vv~a~G~~~~~~~-----~~ 225 (274)
.+.+.+ ++..||.+ +..|+++..++ ..|.+.+|++ +++|.||+|||+.|+.++ +.
T Consensus 243 ~r~~~~---------------l~~~~i~~--~~~v~~~~~~~--~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~ 303 (447)
T 2gv8_A 243 LLGGGD---------------IQNESLQQ--VPEITKFDPTT--REIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLK 303 (447)
T ss_dssp CTTCCS---------------CBCSSEEE--ECCEEEEETTT--TEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCC
T ss_pred eCCCCc---------------CCCCCeEE--ecCeEEEecCC--CEEEECCCCEeccCCEEEECCCCCcCCCCCcccccc
Confidence 987654 34456664 56788885433 3677888976 799999999999999998 65
Q ss_pred ccccccccCCCCcEEeCCCcc--ccCCCCeEEeccccCCC
Q 023975 226 DTILKDSLDTHGMLMVDENLR--VKGQKNIFAIGDITDIR 263 (274)
Q Consensus 226 ~~~~~~~~~~~g~~~v~~~~~--~~~~~~i~~~Gd~~~~~ 263 (274)
..+.. +..++.+.++.+.+ ..++|++|++||+...+
T Consensus 304 ~~~~~--i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~ 341 (447)
T 2gv8_A 304 SPETK--LIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV 341 (447)
T ss_dssp STTTC--CCSSSSSCCSEETTTEETTCTTEEESSCCBSSC
T ss_pred cccCc--eecCCCcccccccccccCCCCcEEEEecccccc
Confidence 53222 22344444443332 13799999999998653
No 87
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.90 E-value=8.9e-25 Score=185.35 Aligned_cols=240 Identities=15% Similarity=0.118 Sum_probs=150.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-C--CcEEEEcCCCCceeeccceeeecCCccc--cceeeecccccc--ccEEEEEee
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-S--ADVTLIDPKEYFEITWASLRAMVEPSFG--KRSVINHTDYLV--NGRIVASPA 84 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g--~~v~vie~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~ 84 (274)
..+||+||||||+|+++|..|++ | ++|+|||+.+.+++.+. ....+.+. ........+++. ++++.....
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~---~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 81 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR---FGVAPDHPEVKNVINTFTQTARSDRCAFYGNVE 81 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH---HTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee---cccCCCCccHHHHHHHHHHHHHhCCcEEEeeeE
Confidence 35799999999999999999974 6 99999999988764431 11111110 011111111111 334332221
Q ss_pred EEEecCeEEeCCCeEEecCEEEEccCCCC-C---CChhH------HHHH----------------------HHccCCchh
Q 023975 85 INITENEVLTAEGRRVVYDYLVIATGHKD-P---VPKTR------TERL----------------------NQYQAGPTG 132 (274)
Q Consensus 85 ~~~~~~~v~~~~~~~~~~~~li~a~G~~~-~---~~~~~------~~~~----------------------~~~~~g~~~ 132 (274)
+ . +.+.+++ ..+.||++|+|||+.+ . +|+.+ ...+ ..+++|.+|
T Consensus 82 v--~-~~V~~~~-~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g 157 (460)
T 1cjc_A 82 V--G-RDVTVQE-LQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVA 157 (460)
T ss_dssp B--T-TTBCHHH-HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHH
T ss_pred E--e-eEEEecc-ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHH
Confidence 1 1 2233333 2468999999999873 3 44321 1111 112348999
Q ss_pred hhHHHHhhhh------------------CCCC-eEEEEeCCCcc--------------CCcCC-----hh----------
Q 023975 133 VELAGEIAVD------------------FPEK-KVTLVHKGSRL--------------LEFIG-----PK---------- 164 (274)
Q Consensus 133 ~e~a~~l~~~------------------~~~~-~v~~~~~~~~~--------------~~~~~-----~~---------- 164 (274)
+|+|..|... ..+. +|+++.+.+.+ ++..+ ..
T Consensus 158 ~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~ 237 (460)
T 1cjc_A 158 LDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKE 237 (460)
T ss_dssp HHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTT
T ss_pred HHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhh
Confidence 9999988730 2344 79999987754 12100 00
Q ss_pred -------HHHHHHHHHHh--------------CCcEEEcCceeeeeccCC-C-ce-eEECC---------------CC--
Q 023975 165 -------AGDKTRDWLIS--------------KKVDVKLGERVNLDSVSE-G-SD-TYLTS---------------TG-- 203 (274)
Q Consensus 165 -------~~~~~~~~~~~--------------~gv~i~~~~~v~~i~~~~-~-~~-~v~~~---------------~g-- 203 (274)
+.+.+.+.+++ .||++++++.+.++..++ + .+ .+++. +|
T Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~ 317 (460)
T 1cjc_A 238 AARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDV 317 (460)
T ss_dssp SCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCce
Confidence 23344445555 789999999999997653 2 22 23332 34
Q ss_pred cEEeecEEEEcccCCCCchhhccccccc-ccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 204 DTINADCHFLCTGKPVGSDWLKDTILKD-SLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 204 ~~~~~d~vv~a~G~~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
++++||.||+++|+.|+. + . ++ +++++|++.+|+.+++.+.|+||++|||+..|.
T Consensus 318 ~~i~~d~Vi~a~G~~p~~-l---~--gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~ 373 (460)
T 1cjc_A 318 EDLPCGLVLSSIGYKSRP-I---D--PSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPT 373 (460)
T ss_dssp EEEECSEEEECCCEECCC-C---C--TTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTT
T ss_pred EEEEcCEEEECCCCCCCC-C---C--CCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCC
Confidence 579999999999999976 2 2 33 466788999999999933799999999996543
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.89 E-value=2.9e-22 Score=172.99 Aligned_cols=243 Identities=17% Similarity=0.158 Sum_probs=149.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c-CCcEEEEcCCCCceeecccee-----eecC-----Cccc--------c-ceeeecc
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFEITWASLR-----AMVE-----PSFG--------K-RSVINHT 71 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~-g~~v~vie~~~~~g~~~~~~~-----~~~~-----~~~~--------~-~~~~~~~ 71 (274)
++||+|||||++|+++|+.|+ + |++|+|+|+++.+|+.|.... .... ..+. . ..+....
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999998 5 999999999998886654211 0000 0000 0 0000000
Q ss_pred ---cc----cc--cc--EEE-EEeeE--EEecC----eEEeCCCeEEecCEEEEccCC--CCCCChhH------------
Q 023975 72 ---DY----LV--NG--RIV-ASPAI--NITEN----EVLTAEGRRVVYDYLVIATGH--KDPVPKTR------------ 119 (274)
Q Consensus 72 ---~~----~~--~~--~~~-~~~~~--~~~~~----~v~~~~~~~~~~~~li~a~G~--~~~~~~~~------------ 119 (274)
.+ .. ++ .+. ...+. ..+.. .|.+++|.++.||+||+|+|. .|..|.++
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~ 167 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHT 167 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEEEe
Confidence 00 00 11 121 11222 22333 677888888999999999994 55544321
Q ss_pred ----------HHHHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCcc-CCcCChhHHHHHHHHH---------------
Q 023975 120 ----------TERLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRL-LEFIGPKAGDKTRDWL--------------- 173 (274)
Q Consensus 120 ----------~~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~--------------- 173 (274)
.+++..+++|.+|+|++..+. ..+.+++++.+.+.+ ++..++.+...+.+.+
T Consensus 168 ~~~~~~~~~~~krV~VIG~G~sgve~a~~l~--~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 245 (540)
T 3gwf_A 168 AAWPEGKSLAGRRVGVIGTGSTGQQVITSLA--PEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSA 245 (540)
T ss_dssp GGCCSSCCCTTSEEEEECCSHHHHHHHHHHT--TTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSS
T ss_pred ecCCCccccccceEEEECCCchHHHHHHHHH--hhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhcc
Confidence 122333455999999999998 568999999999873 3433322221111111
Q ss_pred --------------------------------------------------------------------------------
Q 023975 174 -------------------------------------------------------------------------------- 173 (274)
Q Consensus 174 -------------------------------------------------------------------------------- 173 (274)
T Consensus 246 ~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~ 325 (540)
T 3gwf_A 246 VAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGL 325 (540)
T ss_dssp SCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSC
T ss_pred ccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCC
Confidence
Q ss_pred ---------------HhCCcEEEc--CceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhccccc----ccc
Q 023975 174 ---------------ISKKVDVKL--GERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTIL----KDS 232 (274)
Q Consensus 174 ---------------~~~gv~i~~--~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~----~~~ 232 (274)
.+.+|+++. +..|+++..+ .|++.+|+++++|.||+|||+.++..++....+ +..
T Consensus 326 g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~----gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~ 401 (540)
T 3gwf_A 326 FAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK----GVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLH 401 (540)
T ss_dssp CCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS----EEEETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCB
T ss_pred CccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC----eEEcCCCCEEECCEEEECCccCccccCcCcceEECCCCcC
Confidence 144778875 6788888643 488899999999999999999987645543221 001
Q ss_pred cCC--CCcEEeCCCccccCCCCeEEe-ccccC
Q 023975 233 LDT--HGMLMVDENLRVKGQKNIFAI-GDITD 261 (274)
Q Consensus 233 ~~~--~g~~~v~~~~~~~~~~~i~~~-Gd~~~ 261 (274)
+++ .+.+.....+.+++.||+|.+ |..+.
T Consensus 402 l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~ 433 (540)
T 3gwf_A 402 INDHWDGQPTSYLGVSTANFPNWFMVLGPNGP 433 (540)
T ss_dssp HHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB
T ss_pred HHHhhccChhhccccccCCCCceEEEecCCCC
Confidence 110 123444444566689999999 76544
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.88 E-value=3.8e-23 Score=183.49 Aligned_cols=220 Identities=15% Similarity=0.196 Sum_probs=143.4
Q ss_pred CCCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeecCCccccceeeecccccc--ccEEEEEeeEEE
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLV--NGRIVASPAINI 87 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 87 (274)
...+||+|||||++|+++|..|++ |++|+|+|+++.+|+.+..................+.+.+. ++++.....+.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 449 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT- 449 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCC-
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEec-
Confidence 346899999999999999999974 99999999999888665422111111000000001111111 33333322111
Q ss_pred ecCeEEeCCCeEE-ecCEEEEccCCCCCCChhH---------H-H----------HHHHccCCchhhhHHHHhhhhCCC-
Q 023975 88 TENEVLTAEGRRV-VYDYLVIATGHKDPVPKTR---------T-E----------RLNQYQAGPTGVELAGEIAVDFPE- 145 (274)
Q Consensus 88 ~~~~v~~~~~~~~-~~~~li~a~G~~~~~~~~~---------~-~----------~~~~~~~g~~~~e~a~~l~~~~~~- 145 (274)
. ..+ .||++|+|||+.|..|+++ . + ++..+++|.+|+|+|..+.+ .+
T Consensus 450 ------~---~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~--~G~ 518 (671)
T 1ps9_A 450 ------A---DQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQ--PGE 518 (671)
T ss_dssp ------S---SSSCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTC--CSS
T ss_pred ------H---HHhhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHh--cCC
Confidence 1 124 8999999999886554321 1 1 11113348899999998873 22
Q ss_pred ------------------------------------CeEEEEeCCCccCC-cCChhHHHHHHHHHHhCCcEEEcCceeee
Q 023975 146 ------------------------------------KKVTLVHKGSRLLE-FIGPKAGDKTRDWLISKKVDVKLGERVNL 188 (274)
Q Consensus 146 ------------------------------------~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~ 188 (274)
.+++++.+.+..+. .+++.....+.+.+++.||++++++.+++
T Consensus 519 ~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~ 598 (671)
T 1ps9_A 519 STSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQK 598 (671)
T ss_dssp CGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEE
T ss_pred CcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEE
Confidence 35667766554443 44556667778889999999999999999
Q ss_pred eccCCCceeEECCCC--cEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccCCCC
Q 023975 189 DSVSEGSDTYLTSTG--DTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 189 i~~~~~~~~v~~~~g--~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
+.. +.+.+. .+| +++++|.||+|+|+.|+.+++.... . ..++||++|||+....
T Consensus 599 i~~--~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l~------------------~-~g~~v~aiGD~~~~~~ 654 (671)
T 1ps9_A 599 IDD--DGLHVV-INGETQVLAVDNVVICAGQEPNRALAQPLI------------------D-SGKTVHLIGGCDVAME 654 (671)
T ss_dssp EET--TEEEEE-ETTEEEEECCSEEEECCCEEECCTTHHHHH------------------T-TTCCEEECGGGTCCSS
T ss_pred EeC--CeEEEe-cCCeEEEEeCCEEEECCCccccHHHHHHHH------------------h-cCCCEEEECCcCccCc
Confidence 873 334444 567 5799999999999999887765311 1 2468999999988654
No 90
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.85 E-value=1.7e-21 Score=145.13 Aligned_cols=94 Identities=18% Similarity=0.066 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhcccccccccCCCCcEEeC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLKDTILKDSLDTHGMLMVD 242 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~~~~~~~~~~~~g~~~v~ 242 (274)
+.+.+.+.+.+++.|++++.+ +|++++.+++.+.+.+++| ++.+|.||+|+|..|+ ++...++ +++ +|.+.||
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~--~~~-~g~i~vd 128 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT--LPSLLGL--TRR-GAYIDTD 128 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH--HHHHHTC--CEE-TTEECCC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC--ccccCCC--Ccc-CceEEeC
Confidence 346677888889999999999 9999987777788888888 8999999999999874 3444454 456 8889999
Q ss_pred CCccccCCCCeEEeccccCCCC
Q 023975 243 ENLRVKGQKNIFAIGDITDIRV 264 (274)
Q Consensus 243 ~~~~~~~~~~i~~~Gd~~~~~~ 264 (274)
+.++| +.|+||++|||++.+.
T Consensus 129 ~~~~t-~~~~i~a~GD~~~~~~ 149 (180)
T 2ywl_A 129 EGGRT-SYPRVYAAGVARGKVP 149 (180)
T ss_dssp TTCBC-SSTTEEECGGGGTCCS
T ss_pred CCCCc-CCCCEEEeecccCcch
Confidence 99999 8999999999998765
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.85 E-value=3.7e-21 Score=166.27 Aligned_cols=144 Identities=22% Similarity=0.252 Sum_probs=89.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeee-----c---------CCc----cccc-eeeecc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAM-----V---------EPS----FGKR-SVINHT 71 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~-----~---------~~~----~~~~-~~~~~~ 71 (274)
.++||+|||||++|+++|+.|+ .|++|+|||+++.+|+.|.....- . .+. +... .+....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 3589999999999999999997 599999999999888776321100 0 000 0000 000000
Q ss_pred ---ccc----c--cc--EE-EEEee--EEEecC----eEEeCCCeEEecCEEEEccC--CCCCCC---hhH---------
Q 023975 72 ---DYL----V--NG--RI-VASPA--INITEN----EVLTAEGRRVVYDYLVIATG--HKDPVP---KTR--------- 119 (274)
Q Consensus 72 ---~~~----~--~~--~~-~~~~~--~~~~~~----~v~~~~~~~~~~~~li~a~G--~~~~~~---~~~--------- 119 (274)
.++ . ++ .+ ....+ +..+.. .|.+++|.++.||+||+|+| +.|..| +.+
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h~ 167 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFHS 167 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEEc
Confidence 000 0 00 11 11122 222322 67788898999999999999 555443 321
Q ss_pred -----------------HHHHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCcc
Q 023975 120 -----------------TERLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRL 157 (274)
Q Consensus 120 -----------------~~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~ 157 (274)
.+++..+++|.+|+|++..|. ..+.+++++.+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la--~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 168 SRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAA--ETAKELYVFQRTPNW 220 (545)
T ss_dssp GGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHT--TTBSEEEEEESSCCC
T ss_pred ccccccccccccccccCCCeEEEECCCccHHHHHHHHH--hhCCEEEEEEcCCCc
Confidence 112233455999999999998 568899999998873
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.84 E-value=8.1e-21 Score=164.31 Aligned_cols=144 Identities=21% Similarity=0.266 Sum_probs=90.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee--e---cCCccccce--------------eeec-
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA--M---VEPSFGKRS--------------VINH- 70 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~--~---~~~~~~~~~--------------~~~~- 70 (274)
.++||+|||||++|+++|..|+ .|++|+|||+++.+|+.|....+ . ......... +...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 3579999999999999999997 59999999999988876642210 0 000000000 0000
Q ss_pred --ccc----cc--cc--EEE-EEee--EEEecC----eEEeCCCeEEecCEEEEccC--CCCCCC---hhH---------
Q 023975 71 --TDY----LV--NG--RIV-ASPA--INITEN----EVLTAEGRRVVYDYLVIATG--HKDPVP---KTR--------- 119 (274)
Q Consensus 71 --~~~----~~--~~--~~~-~~~~--~~~~~~----~v~~~~~~~~~~~~li~a~G--~~~~~~---~~~--------- 119 (274)
..+ .. ++ .+. ...+ +..+.. .|.+++|.++.||+||+|+| +.|..| +.+
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~ 179 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHT 179 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEEe
Confidence 000 00 11 111 1122 222333 67788888899999999999 455444 322
Q ss_pred -----------HHHHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCcc
Q 023975 120 -----------TERLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRL 157 (274)
Q Consensus 120 -----------~~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~ 157 (274)
.+++..+++|.+|+|++..|.. .+.+++++.+.+.+
T Consensus 180 ~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 180 ARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAE--QAEQLFVFQRSANY 226 (549)
T ss_dssp GGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHH--HBSEEEEEESSCCC
T ss_pred ccccccccccCCCEEEEECCCchHHHHHHHHHh--hCCEEEEEECCCCc
Confidence 1122234459999999999984 47899999998864
No 93
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.81 E-value=2.1e-19 Score=155.79 Aligned_cols=144 Identities=21% Similarity=0.370 Sum_probs=87.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceee-----ecCC-----cccc---------ceeeec-
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRA-----MVEP-----SFGK---------RSVINH- 70 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~-----~~~~-----~~~~---------~~~~~~- 70 (274)
..+||+|||||++|+++|+.|+ .|++|+|+|+.+.+|+.|..... .... .+.. ..+...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 3589999999999999999997 49999999999988876632110 0000 0000 000000
Q ss_pred --cccc-------c-ccEEE-EEeeEEE--ecC----eEEeCCCeEEecCEEEEccCC--CCCCChhHH-----------
Q 023975 71 --TDYL-------V-NGRIV-ASPAINI--TEN----EVLTAEGRRVVYDYLVIATGH--KDPVPKTRT----------- 120 (274)
Q Consensus 71 --~~~~-------~-~~~~~-~~~~~~~--~~~----~v~~~~~~~~~~~~li~a~G~--~~~~~~~~~----------- 120 (274)
.+++ . ...+. ...+..+ +.. .+.+++|.++.+|+||+|+|. .|..|.++.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~hs 174 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHT 174 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEEC
Confidence 0000 0 11121 1122222 221 567778888999999999995 454443210
Q ss_pred ------------HHHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCcc
Q 023975 121 ------------ERLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRL 157 (274)
Q Consensus 121 ------------~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~ 157 (274)
+++..+++|.+++|++..+.. .+.+++++.+.+.+
T Consensus 175 ~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~--~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 175 GNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAK--QAAELFVFQRTPHF 221 (542)
T ss_dssp GGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHH--HBSEEEEEESSCCC
T ss_pred CCCCCchhccCCCEEEEECCCccHHHHHHHHhh--cCceEEEEEcCCcc
Confidence 111223448899999999984 47899999987765
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.75 E-value=2.8e-17 Score=141.02 Aligned_cols=163 Identities=14% Similarity=0.147 Sum_probs=101.6
Q ss_pred eEEecCEEEEccCCCCCCChhH-------------------------HHHHHHccCCchhhhHHHHhhhhCCCCeEEEEe
Q 023975 98 RRVVYDYLVIATGHKDPVPKTR-------------------------TERLNQYQAGPTGVELAGEIAVDFPEKKVTLVH 152 (274)
Q Consensus 98 ~~~~~~~li~a~G~~~~~~~~~-------------------------~~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~ 152 (274)
.++.++.+|+|+|..|.+|+.. .+++..+++|.||+|++..|.....+++++++.
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~ 278 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIM 278 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEe
Confidence 4678999999999988877621 112445666999999999998666788999999
Q ss_pred CCCccCCcC---------ChhHHHHH-------------------------------HHH-----HH-----hCCcEEEc
Q 023975 153 KGSRLLEFI---------GPKAGDKT-------------------------------RDW-----LI-----SKKVDVKL 182 (274)
Q Consensus 153 ~~~~~~~~~---------~~~~~~~~-------------------------------~~~-----~~-----~~gv~i~~ 182 (274)
|.+.+.+.. .+...+.+ .+. +. .....+..
T Consensus 279 R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~ 358 (501)
T 4b63_A 279 RDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILP 358 (501)
T ss_dssp SSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEEC
T ss_pred CCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecC
Confidence 987664421 11111111 111 11 01234556
Q ss_pred CceeeeeccCCC--ce------------eEECCCCcEEeecEEEEcccCCCCch-hhcccccccccCCCCcEEeCCCccc
Q 023975 183 GERVNLDSVSEG--SD------------TYLTSTGDTINADCHFLCTGKPVGSD-WLKDTILKDSLDTHGMLMVDENLRV 247 (274)
Q Consensus 183 ~~~v~~i~~~~~--~~------------~v~~~~g~~~~~d~vv~a~G~~~~~~-~~~~~~~~~~~~~~g~~~v~~~~~~ 247 (274)
+..+..+..... .+ .+.+.+|+++++|.||+||||.++.+ ++....-.+..+.+|.+.|+.+++.
T Consensus 359 ~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~ 438 (501)
T 4b63_A 359 ERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRV 438 (501)
T ss_dssp SEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBB
T ss_pred CcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEE
Confidence 666655543322 12 24467788999999999999988753 3433222345667788889887654
Q ss_pred c-------CCCCeEEecccc
Q 023975 248 K-------GQKNIFAIGDIT 260 (274)
Q Consensus 248 ~-------~~~~i~~~Gd~~ 260 (274)
. ..++||+.|-+-
T Consensus 439 ~~~~~~~~~~~~i~~qg~~~ 458 (501)
T 4b63_A 439 EMDPSKVSSEAGIWLQGCNE 458 (501)
T ss_dssp CCCTTTBCTTCEEEECSCCH
T ss_pred eecCCccCCCceEEecCCCc
Confidence 1 246799998653
No 95
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.62 E-value=3.3e-17 Score=138.42 Aligned_cols=96 Identities=13% Similarity=0.025 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEccc--------CCCCchhhcccccccccCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTG--------KPVGSDWLKDTILKDSLDT 235 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G--------~~~~~~~~~~~~~~~~~~~ 235 (274)
.+...+.+.+++.| +|+++++|++|+.+++.+.|.+.+|+++.||.||+|+| +.|+.+......+.. ...
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~-~~~ 282 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE-GHG 282 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH-CCC
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh-CCC
Confidence 34455555566667 99999999999988888889999998899999999999 666654433332221 223
Q ss_pred CCcEEeCCCccccCCCCeEEeccccCC
Q 023975 236 HGMLMVDENLRVKGQKNIFAIGDITDI 262 (274)
Q Consensus 236 ~g~~~v~~~~~~~~~~~i~~~Gd~~~~ 262 (274)
...++|+..+++ +.+++|+.||+...
T Consensus 283 ~~~~kv~~~~~~-~~~~i~~~~d~~~~ 308 (431)
T 3k7m_X 283 GQGLKILIHVRG-AEAGIECVGDGIFP 308 (431)
T ss_dssp CCEEEEEEEEES-CCTTEEEEBSSSSS
T ss_pred cceEEEEEEECC-CCcCceEcCCCCEE
Confidence 445899999998 68999999997543
No 96
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.51 E-value=1.7e-13 Score=114.74 Aligned_cols=56 Identities=14% Similarity=0.094 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+.+.+.+.+++.|++++++++|+++..+++.+.|.+.+| ++.||.||+|+|..+
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 35778888889889999999999999988777788888888 899999999999765
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.50 E-value=7.3e-14 Score=107.96 Aligned_cols=56 Identities=11% Similarity=0.001 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHhC-CcEEEcCceeeeeccCCCce-eEECCCCcEEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLISK-KVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
.+...+.+.+++. |++++ +++|+++..+++.+ .+.+.+|+++.||.||+|+|....
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 4667788888886 99998 56899998766654 577888888999999999998543
No 98
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.49 E-value=7.8e-15 Score=124.95 Aligned_cols=143 Identities=15% Similarity=0.058 Sum_probs=81.2
Q ss_pred eEEecCEEEEccCCCCCCCh-------hHHHHHH---HccC------------------CchhhhHHHHhhhhCCCCeEE
Q 023975 98 RRVVYDYLVIATGHKDPVPK-------TRTERLN---QYQA------------------GPTGVELAGEIAVDFPEKKVT 149 (274)
Q Consensus 98 ~~~~~~~li~a~G~~~~~~~-------~~~~~~~---~~~~------------------g~~~~e~a~~l~~~~~~~~v~ 149 (274)
..+.++.+|+|||..+..+. ...+.+. ..+. +. +++++..+. ..+..+
T Consensus 161 g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg-~~~~ae~~~--~~G~~~- 236 (472)
T 2e5v_A 161 LVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE-VFLLTETLR--GEGAQI- 236 (472)
T ss_dssp EECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC-CEECCTHHH--HTTCEE-
T ss_pred CeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC-ceeeehhhc--CCceEE-
Confidence 35779999999998754322 1122211 0000 11 344444443 335555
Q ss_pred EEeCCCccCCcCChhH--------HHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEe-ecEEEEcccCCCC
Q 023975 150 LVHKGSRLLEFIGPKA--------GDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTIN-ADCHFLCTGKPVG 220 (274)
Q Consensus 150 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~-~d~vv~a~G~~~~ 220 (274)
+..+.+++.+..++.. ...+.+.+++.|. ++.+.. .+ +. + .+.++ .+.++.+.|..|+
T Consensus 237 v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~--~~---~~-~------~~~~~~~~~~~~~~G~dp~ 303 (472)
T 2e5v_A 237 INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLS--KI---ED-F------ERKFPVVAKYLARHGHNYK 303 (472)
T ss_dssp EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECT--TC---TT-H------HHHCHHHHHHHHHTTCCTT
T ss_pred ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEecc--ch---HH-H------HHHhHHHHHHHHHhCcCcc
Confidence 5666677765544433 5566666666553 222111 01 00 0 01232 4777888899987
Q ss_pred chhhcccccccccCCCCcEEeCCCccccCCCCeEEeccccC
Q 023975 221 SDWLKDTILKDSLDTHGMLMVDENLRVKGQKNIFAIGDITD 261 (274)
Q Consensus 221 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~~~Gd~~~ 261 (274)
++++..... ....|+|.||.+++| +.|+|||+|||++
T Consensus 304 -~~i~v~p~~--~~~~GGI~vd~~~~t-~ipgLyAaGd~a~ 340 (472)
T 2e5v_A 304 -VKIPIFPAA--HFVDGGIRVNIRGES-NIVNLYAIGEVSD 340 (472)
T ss_dssp -SCEECEEEE--EEESCEEECCTTCBC-SSBTEEECGGGEE
T ss_pred -cceEeehhh--ceeCCCeEECCCCcc-ccCCEEecchhcc
Confidence 555433221 223689999999999 8999999999987
No 99
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.43 E-value=1.3e-12 Score=112.49 Aligned_cols=57 Identities=9% Similarity=-0.089 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+.+.+.+.+++.|++|+++++|++|+.+++++ .|++.+|+++.||.||++++...
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 3578888899999999999999999999888765 48899999999999999987643
No 100
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.41 E-value=8.3e-13 Score=109.53 Aligned_cols=56 Identities=9% Similarity=-0.082 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++++++|++++.+++.+.|.+.+| ++.||.||+|+|...
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 45778888999999999999999999988777788888887 799999999999754
No 101
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.40 E-value=5.3e-13 Score=110.15 Aligned_cols=64 Identities=6% Similarity=-0.123 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCc-eeEECCCC--cEEeecEEEEcccCCCCchhhccc
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTG--DTINADCHFLCTGKPVGSDWLKDT 227 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g--~~~~~d~vv~a~G~~~~~~~~~~~ 227 (274)
..+...+.+.+++.|++++++++|++++.+++. +.+.+.+| .++.||.||+|+|... ..++...
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s-~~l~~~~ 216 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA-PGLARRI 216 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH-HHHHHTE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch-HHHHHHh
Confidence 457888889999999999999999999887655 77888887 4899999999999764 3444433
No 102
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.36 E-value=4.3e-12 Score=105.53 Aligned_cols=70 Identities=19% Similarity=0.091 Sum_probs=53.7
Q ss_pred eEEEEeCCCccCCcCChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 147 KVTLVHKGSRLLEFIGPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 147 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
...++......+. ...+...+.+.+++.|++++.+++|++++.+++.+.+.+++| ++.||.||+|+|...
T Consensus 136 ~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 136 YNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp EEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred ceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 4455554433222 245778888999999999999999999988777777777666 799999999999764
No 103
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.35 E-value=1.4e-11 Score=104.07 Aligned_cols=57 Identities=21% Similarity=0.180 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHHhCCcEEEcCc---eeeeeccCCCcee-EECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGE---RVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~---~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|+++++++ +|+++..+++.+. |++.+|+++.||.||+|+|...
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 3577888899999999999999 9999987777666 8899998899999999999753
No 104
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.34 E-value=1e-11 Score=103.00 Aligned_cols=56 Identities=9% Similarity=-0.153 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++.+++|++++.+++.+.+.+.+| ++.||.||+|+|...
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH
Confidence 45778888889999999999999999988777777777777 799999999999864
No 105
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.34 E-value=1.8e-11 Score=108.94 Aligned_cols=57 Identities=5% Similarity=-0.006 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++++++|++++.+++.+.|.+.+|+++.||.||+|+|...
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 457888888899999999999999999988888888888888899999999999753
No 106
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.34 E-value=6e-12 Score=106.61 Aligned_cols=57 Identities=14% Similarity=0.196 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCc-eeEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+.+.+.+.+++.|++++++++|+++..+++. +.|.+.+|+++.||.||+|+|..+
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 457788888899999999999999999866655 678888887899999999999765
No 107
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.33 E-value=2.5e-12 Score=102.36 Aligned_cols=97 Identities=13% Similarity=-0.005 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHh-CCcEEEcCceeeeeccCCCce-eEECC---------CC-----cEEeecEEEEcccCCCCch-----
Q 023975 164 KAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTS---------TG-----DTINADCHFLCTGKPVGSD----- 222 (274)
Q Consensus 164 ~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~---------~g-----~~~~~d~vv~a~G~~~~~~----- 222 (274)
.+...+.+.+.+ .|++++.+++|+++..+++.+ .+.+. +| .++.||.||+|+|..+...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~ 199 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 199 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHH
Confidence 455666676765 699999999999998665543 34331 22 5799999999999766532
Q ss_pred hhcccccccccCCCCcEEeCC-------CccccCCCCeEEeccccC
Q 023975 223 WLKDTILKDSLDTHGMLMVDE-------NLRVKGQKNIFAIGDITD 261 (274)
Q Consensus 223 ~~~~~~~~~~~~~~g~~~v~~-------~~~~~~~~~i~~~Gd~~~ 261 (274)
.+...++...+.+...+.++. ..++ ..|++|++|+++.
T Consensus 200 ~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 200 RLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVA 244 (284)
T ss_dssp HHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHH
T ss_pred HhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehh
Confidence 111112112222333333332 2334 5799999999873
No 108
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.32 E-value=1.7e-11 Score=102.26 Aligned_cols=58 Identities=7% Similarity=-0.095 Sum_probs=48.4
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeeeccC----CCceeEECCCCcEEeecEEEEcccCCCC
Q 023975 162 GPKAGDKTRDWLISKKVDVKLGERVNLDSVS----EGSDTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~----~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
...+.+.+.+.+++.|+++++++.|+++..+ ++.+.+.+++| ++.||.||+|+|..+.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCccC
Confidence 4567788888899999999999999999865 45677777766 7999999999998773
No 109
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.32 E-value=6.2e-13 Score=114.68 Aligned_cols=52 Identities=13% Similarity=-0.042 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
.+.+.+.+.+++.|+++.++++|++|..+++ .+++.+|+++.||.||+++..
T Consensus 223 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~--~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 223 GIWIAVANTLPKEKTRFGEKGKVTKVNANNK--TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHTSCGGGEEESGGGCEEEEETTTT--EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHhcCeeeecceEEEEEEccCC--EEEEcCCCEEECCEEEECCCH
Confidence 4667777777888999999999999987655 466789999999999999763
No 110
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.31 E-value=4.6e-12 Score=105.18 Aligned_cols=56 Identities=11% Similarity=-0.147 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCcee-EECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++.+++|++++.+++.+. |.+.+| ++.||.||+|+|...
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 45677888889999999999999999987777665 777777 799999999999764
No 111
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.29 E-value=1.9e-11 Score=102.10 Aligned_cols=57 Identities=9% Similarity=0.032 Sum_probs=49.9
Q ss_pred hHHHHHHHHHHhC-CcEEEcCceeeeeccCCCce--eEECCCCcEEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLISK-KVDVKLGERVNLDSVSEGSD--TYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~~--~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
.+.+.+.+.+++. |++++.+++|++++.+++.+ .+++.+|+++.+|.||.|+|....
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 4677888888887 99999999999998887777 888889989999999999998654
No 112
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.29 E-value=5.7e-11 Score=105.87 Aligned_cols=57 Identities=5% Similarity=-0.045 Sum_probs=49.6
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCc-EEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD-TINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~-~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++++++|++++.+++.+.|.+.+|+ ++.||.||+|+|...
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 457888888899999999999999999988888888888887 899999999999753
No 113
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.28 E-value=7.4e-12 Score=105.40 Aligned_cols=62 Identities=11% Similarity=0.085 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCcee-EECCCCcEEeecEEEEcccCCCCchhhc
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPVGSDWLK 225 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~~~~~~~ 225 (274)
..+.+.+.+.+++.|++|+++++|++|+.+++.+. |++ +|+++.||.||+|+|......++.
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHHhcC
Confidence 45788889999999999999999999988777665 555 477899999999999755444443
No 114
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.28 E-value=7.1e-12 Score=105.41 Aligned_cols=62 Identities=13% Similarity=0.080 Sum_probs=51.1
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCchhhc
Q 023975 162 GPKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLK 225 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~ 225 (274)
...+.+.+.+.+++.|++|+++++|++|+.+++.+ | +.+|+++.||.||+|+|......++.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLIG 249 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhcC
Confidence 35688889999999999999999999999877777 5 45677899999999999765445543
No 115
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.28 E-value=2.8e-11 Score=101.02 Aligned_cols=55 Identities=16% Similarity=0.044 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++++++|++++.+++.+.+.+++| ++.||.||+|+|...
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcCh
Confidence 4667788888889999999999999987777777777665 799999999999753
No 116
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.27 E-value=5.5e-12 Score=108.52 Aligned_cols=58 Identities=19% Similarity=0.237 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEECCCCcEEeecEEEEcccCCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
..+.+.+.+.+++.|++++.+++|++++.+++.+ .|.+.+|+++.||.||+|+|..+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 4567778888888999999999999998776654 488889999999999999999874
No 117
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.27 E-value=1.2e-11 Score=106.86 Aligned_cols=45 Identities=13% Similarity=-0.062 Sum_probs=39.3
Q ss_pred hCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 175 SKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 175 ~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..|++++++++|++|+.+++.+.|.+.+|+++.||.||+|++...
T Consensus 224 ~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 224 LLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred HcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 347899999999999988888888889998999999999998643
No 118
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.25 E-value=1.4e-10 Score=96.83 Aligned_cols=54 Identities=9% Similarity=-0.097 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCC
Q 023975 165 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 165 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
+.+.+.+.+ .|++++.+++|++++.+++.+.+.+.+|+++.+|.||.|.|....
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 444444444 489999999999998888888899999999999999999997643
No 119
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.24 E-value=2.9e-11 Score=100.79 Aligned_cols=56 Identities=11% Similarity=-0.079 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCcee-EEC---CCCcEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLT---STGDTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~---~~g~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.+++|++++.+++.+. |.+ .++.++.||.||.|+|...
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 3667788888888999999999999987776654 655 3556899999999999764
No 120
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.24 E-value=1e-10 Score=97.96 Aligned_cols=55 Identities=16% Similarity=0.174 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
.+...+.+.+.+ ++++.+++|++++.+++.+.+++.+|+++.+|.||.|.|....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSA 182 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCS
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChH
Confidence 366677777766 8999999999999888888899999999999999999997544
No 121
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.22 E-value=3.6e-11 Score=100.50 Aligned_cols=55 Identities=16% Similarity=-0.067 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCc-eeEECCCCcEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.+++|++++.+++. ..+.+.+| ++.+|.||+|+|...
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 57778888899999999999999999876654 45777777 799999999999754
No 122
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.22 E-value=2e-11 Score=104.10 Aligned_cols=40 Identities=23% Similarity=0.191 Sum_probs=36.8
Q ss_pred cEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccC
Q 023975 178 VDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 178 v~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
++|+++++|++|+.+++++.|++++|+++.||.||+|++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCH
Confidence 7999999999999888888899999988999999999985
No 123
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.22 E-value=2.4e-11 Score=102.14 Aligned_cols=56 Identities=18% Similarity=0.049 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCce--eEECCCCc--EEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD--TYLTSTGD--TINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~--~v~~~~g~--~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.+++|++++.+++.. .+.+.+|+ ++.||.||.|+|...
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 466778888888899999999999998766653 45667887 799999999999764
No 124
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.22 E-value=1.9e-10 Score=95.38 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
.+.+.+.+.+++.|++++.+++|++++. + . .+++.+|+++.+|.||.|+|..+.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEETTSCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEECCCCEEEcCEEEECCCccHH
Confidence 4677888888889999999999999987 3 3 788888989999999999998654
No 125
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.21 E-value=9.5e-11 Score=100.12 Aligned_cols=55 Identities=16% Similarity=0.037 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCc-eeEECCCCcEEeecEEEEcccCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS-DTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
..+.+.+.+.+++.|++|+++++|++|+.++++ +.|.+. +.++.||.||+|++..
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPAS 289 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHH
Confidence 357888999999999999999999999877665 677664 5579999999999853
No 126
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.21 E-value=1.8e-10 Score=95.20 Aligned_cols=55 Identities=16% Similarity=0.042 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.+++|++++.+++.+.+.+.+| ++.||.||+|+|...
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 5777888888999999999999999987777777888777 499999999999653
No 127
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.20 E-value=1.3e-10 Score=94.67 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=41.0
Q ss_pred HHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEe-ecEEEEcccCC
Q 023975 168 KTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTIN-ADCHFLCTGKP 218 (274)
Q Consensus 168 ~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~-~d~vv~a~G~~ 218 (274)
.+.+.+.+ |++++++++|++++.+++.+.+++++|+.+. +|.||+|+|..
T Consensus 111 ~l~~~l~~-g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~ 161 (336)
T 1yvv_A 111 AITRAMRG-DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAP 161 (336)
T ss_dssp HHHHHHHT-TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHH
T ss_pred HHHHHHHc-cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHH
Confidence 34444443 8999999999999988888889998998664 99999999964
No 128
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.17 E-value=3.3e-11 Score=98.49 Aligned_cols=42 Identities=17% Similarity=0.090 Sum_probs=38.0
Q ss_pred CCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccC
Q 023975 176 KKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 176 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
.|++++++++|++|+.+++.+.|.+.+|+++.+|.||+|++.
T Consensus 122 ~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred cCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 489999999999999888888899888888899999999984
No 129
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.17 E-value=1.1e-10 Score=101.89 Aligned_cols=56 Identities=16% Similarity=0.025 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccC-CCceeEECC-CC--cEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVS-EGSDTYLTS-TG--DTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~~v~~~-~g--~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.+++|+++..+ ++.+.|.+. +| .++.||.||.|+|...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 46777888888899999999999999875 445677776 66 5799999999999754
No 130
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.17 E-value=4.7e-11 Score=99.32 Aligned_cols=56 Identities=11% Similarity=-0.061 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeE-E-CCCC--cEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTY-L-TSTG--DTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v-~-~~~g--~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+.+.|++++.+++++.+..+++.+.. . ..++ .++.||.||-|.|...
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 35667778888899999999999998877665432 2 2233 3689999999999653
No 131
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.17 E-value=2.1e-10 Score=99.38 Aligned_cols=56 Identities=11% Similarity=-0.050 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCC----ceeEECCCC---cEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEG----SDTYLTSTG---DTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~----~~~v~~~~g---~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.+++|++++.+++ .+.+++.++ .++.||.||.|.|...
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 4677788888889999999999999998777 777777766 6899999999999764
No 132
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.15 E-value=7.5e-11 Score=99.99 Aligned_cols=61 Identities=20% Similarity=0.114 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeecc---------------CCCce-eEECCCCcEE--eecEEEEcccCCCCchhhc
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSV---------------SEGSD-TYLTSTGDTI--NADCHFLCTGKPVGSDWLK 225 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~---------------~~~~~-~v~~~~g~~~--~~d~vv~a~G~~~~~~~~~ 225 (274)
.+...+.+.+++.|++++.+++|++++. +++.+ .|.+.+| ++ .||.||+|+|... ..++.
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s-~~l~~ 259 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS-NRLLN 259 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH-HHHHG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH-HHHHH
Confidence 6788889999999999999999999986 44443 5777777 58 9999999999764 33444
Q ss_pred c
Q 023975 226 D 226 (274)
Q Consensus 226 ~ 226 (274)
.
T Consensus 260 ~ 260 (448)
T 3axb_A 260 P 260 (448)
T ss_dssp G
T ss_pred H
Confidence 3
No 133
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.14 E-value=1e-10 Score=99.34 Aligned_cols=57 Identities=11% Similarity=-0.018 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCcee-EECC---CCc--EEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDT-YLTS---TGD--TINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~---~g~--~~~~d~vv~a~G~~~~ 220 (274)
.+.+.+.+.+++.|++++.+++|+++..+++.+. |++. +|+ ++.||.||.|+|....
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 3667788888889999999999999987666543 4443 675 7999999999997543
No 134
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.13 E-value=1.6e-10 Score=100.58 Aligned_cols=57 Identities=11% Similarity=0.106 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEEC--CCC-cEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT--STG-DTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~--~~g-~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++.+++|++++.+++.+.+++ .+| +++.||.||.|.|...
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 34667788888888999999999999998888888877 678 6899999999999764
No 135
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.12 E-value=1.6e-10 Score=100.49 Aligned_cols=57 Identities=12% Similarity=-0.040 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEECCC---C--cEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTST---G--DTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~---g--~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|+++..+++|+++..+++.+ .|.+.+ | .++.||.||+|+|...
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 4577788888899999999999999998876653 455432 3 4799999999999754
No 136
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.11 E-value=2.6e-10 Score=96.73 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=35.8
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecc
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA 52 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~ 52 (274)
++||+|||||++||+||+.|+ .|++|+|+|+++.+|+...
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 479999999999999999998 4999999999998886543
No 137
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.11 E-value=3.9e-10 Score=96.67 Aligned_cols=56 Identities=11% Similarity=0.184 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCc---EEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD---TINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~---~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.++++++++.+++.+.+++.+++ ++.+|.||.|.|...
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 36677888888889999999999999988888888877764 799999999999764
No 138
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.10 E-value=1.7e-09 Score=91.30 Aligned_cols=56 Identities=9% Similarity=-0.107 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeecc-CCCc-eeEECCCCcEEeecEEEEcccCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSV-SEGS-DTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~-~~~~-~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
..+.+.+.+.+++.|++++++++|++|.. +++. ..|++.+|+++.||.||+++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 46889999999999999999999999987 4444 56888889899999999999987
No 139
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.10 E-value=1.1e-09 Score=91.30 Aligned_cols=57 Identities=7% Similarity=-0.119 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCC-CceeEEC-CCCc--EEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSE-GSDTYLT-STGD--TINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~~v~~-~~g~--~~~~d~vv~a~G~~~~ 220 (274)
.+...+.+.+.+.|++++.+++|++++.++ +.+.+++ .+|+ ++.+|.||.|.|....
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 356677777878899999999999998753 4567776 6887 7999999999997654
No 140
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.08 E-value=9.9e-11 Score=106.48 Aligned_cols=56 Identities=23% Similarity=0.070 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++.+++|++++.+++.+ .|.+++| ++.||.||+|+|...
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 3578888899999999999999999998766654 4677777 799999999999764
No 141
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.08 E-value=5.2e-10 Score=96.37 Aligned_cols=56 Identities=18% Similarity=0.041 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCc---eeEECCCCc--EEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS---DTYLTSTGD--TINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~---~~v~~~~g~--~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.+++|++++.+++. +.+...+|+ ++.||.||.|+|...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 46777888888899999999999999887664 345566774 899999999999754
No 142
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.07 E-value=2.9e-10 Score=97.53 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCc---EEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD---TINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~---~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.+++|++++.+++.+.+++.+++ ++.+|.||.|.|...
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 36677888888889999999999999988888888877764 799999999999764
No 143
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.07 E-value=6.8e-10 Score=92.85 Aligned_cols=56 Identities=14% Similarity=0.105 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceee---------eeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVN---------LDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~---------~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++.+++|+ +++.+++.+.|.+.+| ++.||.||+|+|...
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 3577888888999999999999999 8887766666766666 799999999999764
No 144
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.07 E-value=8.3e-10 Score=96.36 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCC-Cce-eEECC--CCc--EEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSE-GSD-TYLTS--TGD--TINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~--~g~--~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++++++|+++..++ +.+ .++.. +|+ ++.+|.||+|+|...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 3567788888889999999999999998765 443 24433 665 689999999999643
No 145
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.06 E-value=1.5e-09 Score=90.57 Aligned_cols=54 Identities=13% Similarity=-0.036 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCC
Q 023975 165 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 165 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
+.+.+.+.+. +++++.+++|++++.+++.+.+++.+|+++.+|.||.|.|....
T Consensus 130 l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 130 LRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp HHHHHHHTSC--TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred HHHHHHhhcC--CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 4444444443 36889999999998887788888999988999999999997543
No 146
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.05 E-value=4.6e-10 Score=97.81 Aligned_cols=57 Identities=25% Similarity=0.195 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCC-Cce-eEEC--CCCc--EEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSE-GSD-TYLT--STGD--TINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~--~~g~--~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++++++|+++..++ +.+ .|++ .+|+ ++.+|.||+|+|...
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 3467788888889999999999999998766 543 3443 3675 689999999999644
No 147
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.05 E-value=1e-09 Score=94.49 Aligned_cols=56 Identities=16% Similarity=0.060 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccC-CCce-eEECC-CCc--EEeec-EEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVS-EGSD-TYLTS-TGD--TINAD-CHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~-~g~--~~~~d-~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++++++|+++..+ ++.+ .|+.. +++ ++.|| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 67888889999999999999999999876 4443 34433 333 68996 9999999544
No 148
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.05 E-value=1.2e-10 Score=92.19 Aligned_cols=40 Identities=25% Similarity=0.281 Sum_probs=35.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeec
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~ 51 (274)
|..||+||||||+||+||+.|+ +|++|+||||.+.+|+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 3479999999999999999998 499999999999887543
No 149
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.03 E-value=1.1e-09 Score=93.76 Aligned_cols=58 Identities=7% Similarity=-0.075 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccC---CCceeEEC--C-CC--cEEeecEEEEcccCCCCc
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVS---EGSDTYLT--S-TG--DTINADCHFLCTGKPVGS 221 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~---~~~~~v~~--~-~g--~~~~~d~vv~a~G~~~~~ 221 (274)
.+...+.+.+++.|++++.+++|++++.+ ++.+.+.+ . +| +++.+|.||.|+|..+..
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 46677888888899999999999999864 34556665 4 56 479999999999986654
No 150
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.02 E-value=2.6e-09 Score=91.75 Aligned_cols=57 Identities=18% Similarity=0.057 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEEC---CCCc--EEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT---STGD--TINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~---~~g~--~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++.+++|+++..+++.+.|.+ .+|+ ++.||.||+|+|...
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 35777888888999999999999999987665556665 3565 799999999999764
No 151
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.00 E-value=7.3e-10 Score=96.40 Aligned_cols=138 Identities=14% Similarity=0.137 Sum_probs=76.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC-Cceeeccc--e---------------ee--------------ec
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE-YFEITWAS--L---------------RA--------------MV 58 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~-~~g~~~~~--~---------------~~--------------~~ 58 (274)
..+||+|||||+||++||+.|+ .|.+|+|+|+.. .+|..... . .. .+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 3589999999999999999998 499999999974 22210000 0 00 00
Q ss_pred CCc--cccce---eee---c----ccc---ccccEEEEEeeEEEe--cC---eEEeCCCeEEecCEEEEccCCCCCCChh
Q 023975 59 EPS--FGKRS---VIN---H----TDY---LVNGRIVASPAINIT--EN---EVLTAEGRRVVYDYLVIATGHKDPVPKT 118 (274)
Q Consensus 59 ~~~--~~~~~---~~~---~----~~~---~~~~~~~~~~~~~~~--~~---~v~~~~~~~~~~~~li~a~G~~~~~~~~ 118 (274)
... ..... ... + .+. ..+++++...+..+. .. .|.+.+|..+.++.+|+|+|..+..+..
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCccc
Confidence 000 00000 000 0 001 125666666665553 22 4567788889999999999997543321
Q ss_pred ---HHHHHHHccCCchhhhHHHHhhhhCCCCeEEEEe
Q 023975 119 ---RTERLNQYQAGPTGVELAGEIAVDFPEKKVTLVH 152 (274)
Q Consensus 119 ---~~~~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~ 152 (274)
....-... ++.++.+++..+. ..|.+++.+.
T Consensus 187 ~G~~~~~~gri-Gg~~a~eLA~~L~--~lG~~v~~~~ 220 (651)
T 3ces_A 187 IGLDNYSGGRA-GDPPSIPLSRRLR--ELPLRVGRLK 220 (651)
T ss_dssp CC--------------CCHHHHHHH--TTTCCEEEEC
T ss_pred cCcccCCCCCc-cchhhhHHHHHHH--hcCCeEEEec
Confidence 11000112 2567788888887 5577776653
No 152
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.99 E-value=2.6e-10 Score=97.94 Aligned_cols=56 Identities=7% Similarity=-0.070 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHHhCC-cEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCC
Q 023975 163 PKAGDKTRDWLISKK-VDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 163 ~~~~~~~~~~~~~~g-v~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
..+.+.+.+.+++.| ++|+++++|++|+.+++.+.|.+.+|+++.||.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 357778888888888 99999999999988777888888888889999999999964
No 153
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.96 E-value=2.6e-09 Score=89.42 Aligned_cols=56 Identities=13% Similarity=0.027 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHh-CC-cEEEcCceeeeeccCCCceeEECCC---C--cEEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLIS-KK-VDVKLGERVNLDSVSEGSDTYLTST---G--DTINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~---g--~~~~~d~vv~a~G~~~~ 220 (274)
.+.+.+.+.+++ .| ++++.+++|++++. ++.+.+.+.+ | +++.||.||.|.|....
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccch
Confidence 466677777765 35 68999999999987 6677777665 7 57999999999997543
No 154
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.95 E-value=2.8e-09 Score=92.41 Aligned_cols=57 Identities=21% Similarity=0.301 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCc--eeEECCCCcEEeecEEEEcccCCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
..+...+.+.+++.|++++.+ +|++++.++++ ..|.+.+|+++.+|.||.|+|....
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 357778888888899999999 89999765443 4677888888999999999997543
No 155
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.93 E-value=3.1e-09 Score=92.26 Aligned_cols=55 Identities=24% Similarity=0.230 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHhC-CcEEEcCceeeeeccCCCc--eeEECCCCcEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISK-KVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++. |++++.+ +|++++.++++ ..|.+.+|+++.||.||.|+|...
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 4777888888888 9999999 99999765443 567888888899999999999754
No 156
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.92 E-value=8.1e-09 Score=86.26 Aligned_cols=44 Identities=14% Similarity=0.069 Sum_probs=36.7
Q ss_pred CCcEEEcCceeeeeccCC-CceeEECCCCcEEeecEEEEcccCCC
Q 023975 176 KKVDVKLGERVNLDSVSE-GSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 176 ~gv~i~~~~~v~~i~~~~-~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
.+..++.++++++++..+ +.+.+.++||+++++|.||-|-|...
T Consensus 122 ~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNS 166 (412)
T ss_dssp CTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred ccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCc
Confidence 356788999999997644 46889999999999999999999643
No 157
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.91 E-value=1.2e-08 Score=88.97 Aligned_cols=57 Identities=19% Similarity=0.196 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCC-Cce-eEEC--CCCc--EEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSE-GSD-TYLT--STGD--TINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~--~~g~--~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++++++|+++..++ +.+ .|+. .+|+ ++.+|.||+|+|..+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 3567788888889999999999999997655 443 3443 3664 689999999999654
No 158
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.90 E-value=7.7e-09 Score=90.32 Aligned_cols=57 Identities=16% Similarity=-0.004 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCC-ce-eEECC------CC---------cEEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEG-SD-TYLTS------TG---------DTINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~~-~v~~~------~g---------~~~~~d~vv~a~G~~~~ 220 (274)
.+...+.+.+++.|++++.++.++++..+++ .+ .|.+. +| .++.||.||.|+|....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 4777888888889999999999999986653 34 36654 33 58999999999998653
No 159
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.90 E-value=9.2e-09 Score=89.50 Aligned_cols=56 Identities=18% Similarity=0.161 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHh-CCcEEEcCceeeeeccCCCcee-EECCCCcEEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
.+...+.+.+++ .|+++.. ..|+.+..+++.+. |.+.+|+++.||.||+|+|..++
T Consensus 118 ~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred HHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 466777888887 4999965 48888876666554 78888889999999999997654
No 160
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.90 E-value=2.5e-09 Score=91.27 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=36.0
Q ss_pred cEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCC
Q 023975 178 VDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 178 v~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
++|+++++|++|+.+++.+.|++.+| ++.||.||+|++..
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~ 288 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHP 288 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHH
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHH
Confidence 79999999999988888888999889 79999999999853
No 161
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.89 E-value=3.6e-09 Score=91.52 Aligned_cols=37 Identities=27% Similarity=0.332 Sum_probs=33.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhhcCCcEEEEcCCCCce
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYFE 48 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~g~~v~vie~~~~~g 48 (274)
..+||+|||||++||++|+.|++|.+|+|+||.+..+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTE 43 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCTTC
T ss_pred CCCCEEEECccHHHHHHHHHHhcCCcEEEEECCCCCC
Confidence 3589999999999999999997799999999988765
No 162
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.87 E-value=1.6e-08 Score=87.81 Aligned_cols=53 Identities=9% Similarity=0.110 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCC---C--cEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTST---G--DTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~---g--~~~~~d~vv~a~G~~~ 219 (274)
.+.+.+.+.+++. ++.++++++++.+++.+.+++.+ | +++.||.||.|.|...
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 3555667777665 89999999999888877777654 6 4799999999999764
No 163
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.86 E-value=1.5e-08 Score=88.58 Aligned_cols=56 Identities=13% Similarity=-0.003 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccC-CCce-eEE---CCCCc--EEeecEEEEcccCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVS-EGSD-TYL---TSTGD--TINADCHFLCTGKP 218 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~-~v~---~~~g~--~~~~d~vv~a~G~~ 218 (274)
..+...+.+.+++.|+++++++.|+++..+ ++.+ .+. ..+|+ .+.|+.||+|+|-.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 356677888888899999999999999865 4433 343 25665 68999999999953
No 164
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.84 E-value=2.7e-09 Score=92.53 Aligned_cols=34 Identities=32% Similarity=0.339 Sum_probs=31.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~ 45 (274)
..+||+|||||+||++||+.|++ |.+|+|+|++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 35899999999999999999985 99999999974
No 165
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.84 E-value=8.4e-09 Score=90.28 Aligned_cols=54 Identities=15% Similarity=0.019 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHhCC-cEEEcCceeeeeccCCCce-eE--E-CCCCc--EEeecEEEEcccC
Q 023975 164 KAGDKTRDWLISKK-VDVKLGERVNLDSVSEGSD-TY--L-TSTGD--TINADCHFLCTGK 217 (274)
Q Consensus 164 ~~~~~~~~~~~~~g-v~i~~~~~v~~i~~~~~~~-~v--~-~~~g~--~~~~d~vv~a~G~ 217 (274)
.+...+.+.+++.| ++++.++.++++..+++.+ .+ . +.+|+ .+.|+.||+|+|.
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 46677778788888 9999999999998765532 23 2 36776 7899999999995
No 166
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.82 E-value=1e-08 Score=88.28 Aligned_cols=55 Identities=18% Similarity=0.173 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCc--eeEECCCCcEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|++++.+ +|++++.++++ ..|.+.+|+++.+|.||.|+|...
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 46777888888899999999 89999865444 567888888899999999999754
No 167
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.79 E-value=4.7e-09 Score=92.55 Aligned_cols=55 Identities=15% Similarity=0.026 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEE---CCCCc--EEeecEEEEcccCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYL---TSTGD--TINADCHFLCTGKP 218 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~---~~~g~--~~~~d~vv~a~G~~ 218 (274)
.+...+.+.+++.|++++.++.|.++..+++.+ .+. +.+|+ .+.|+.||+|||-.
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 466677777888899999999999997655532 332 35675 58999999999953
No 168
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.78 E-value=3.5e-08 Score=88.48 Aligned_cols=49 Identities=16% Similarity=0.094 Sum_probs=40.8
Q ss_pred HHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccC
Q 023975 168 KTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 168 ~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
.+.+.+. .|++|+++++|++|+.+++++.|++.+|+++.||.||+|++.
T Consensus 535 ~l~~aLa-~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 535 VIIEKLA-EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp HHHHHHH-TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred HHHHHHH-hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 3334343 478999999999999888888899999989999999999863
No 169
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.77 E-value=5.4e-09 Score=90.34 Aligned_cols=55 Identities=15% Similarity=0.115 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHh-CCcEEEcCceeeeeccCCCc--eeEECCCCcEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLIS-KKVDVKLGERVNLDSVSEGS--DTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++ .|++++.+ .|++++.++++ ..+.+.+|+++.+|.||.|+|...
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 467778888888 89999999 59999765443 367777877899999999999754
No 170
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.75 E-value=1.9e-08 Score=88.05 Aligned_cols=56 Identities=9% Similarity=-0.064 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEEC---CCCc--EEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLT---STGD--TINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~---~~g~--~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+.+.|++++.++.+.++..+++.+ .+.. .+|+ .+.|+.||+|||-..
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 466777788888999999999999998665533 3332 4665 689999999999543
No 171
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.73 E-value=1e-07 Score=84.27 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHhCCc--EEEcCceeeeeccCCC----ceeEECC------CC--cEEeecEEEEcccCCC
Q 023975 164 KAGDKTRDWLISKKV--DVKLGERVNLDSVSEG----SDTYLTS------TG--DTINADCHFLCTGKPV 219 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv--~i~~~~~v~~i~~~~~----~~~v~~~------~g--~~~~~d~vv~a~G~~~ 219 (274)
.+...+.+.+++.|+ +++.++++++++.+++ .+.+++. +| +++.||.||.|.|...
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 466778888888876 9999999999987652 4666554 45 4799999999999764
No 172
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.73 E-value=6.1e-09 Score=84.43 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=34.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh---cCCcEEEEcCCCCceee
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEYFEIT 50 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~---~g~~v~vie~~~~~g~~ 50 (274)
.+||+|||||||||+||++|+ .|++|+||||.+.+|+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~ 105 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCce
Confidence 479999999999999999995 39999999999988854
No 173
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.72 E-value=4.6e-08 Score=78.41 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=32.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYFE 48 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~g 48 (274)
.+||+|||||++|+++|+.|+ . |++|+|+|+.+..|
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 359999999999999999997 4 99999999988776
No 174
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.62 E-value=2.8e-08 Score=84.21 Aligned_cols=56 Identities=9% Similarity=-0.204 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccC--CCce-eEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVS--EGSD-TYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~--~~~~-~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+.+.+.+.+++.|++++++++|++|..+ ++.+ .|.+ +|+++.||.||+++|..+
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccc
Confidence 468889999999999999999999999876 5544 4555 578899999999999875
No 175
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.58 E-value=4.3e-08 Score=80.48 Aligned_cols=44 Identities=25% Similarity=0.493 Sum_probs=37.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCC-CCceeeccce
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK-EYFEITWASL 54 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~-~~~g~~~~~~ 54 (274)
...+||+|||||++||++|+.|+ .|++|+|+|++ +.+|+.+...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~ 87 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTF 87 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeee
Confidence 34689999999999999999998 49999999999 8888765433
No 176
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.57 E-value=4.9e-08 Score=82.04 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=36.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCCCceeecc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKEYFEITWA 52 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g-~~v~vie~~~~~g~~~~ 52 (274)
+.+||+|||||++||+||+.|+ .| ++|+|+|+++.+|+...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCH 47 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCccc
Confidence 4589999999999999999998 48 99999999999886543
No 177
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.56 E-value=5.8e-08 Score=80.91 Aligned_cols=42 Identities=17% Similarity=0.206 Sum_probs=37.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-c-CCcEEEEcCCCCceeeccc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYFEITWAS 53 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~-g~~v~vie~~~~~g~~~~~ 53 (274)
.++||+|||||++||++|+.|+ . |++|+|+|+++.+|+....
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 3589999999999999999997 5 8999999999999876544
No 178
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.56 E-value=4.9e-08 Score=83.90 Aligned_cols=40 Identities=33% Similarity=0.420 Sum_probs=35.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeec
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITW 51 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~ 51 (274)
..+||+|||||++||++|+.|++ |++|+|+|+.+.+|+..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 45899999999999999999985 99999999999988654
No 179
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.55 E-value=6.1e-08 Score=80.19 Aligned_cols=44 Identities=23% Similarity=0.315 Sum_probs=38.1
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccce
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASL 54 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~ 54 (274)
...+||+|||||++|+++|+.|+ .|.+|+|+|+.+.+|+.+...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 34689999999999999999997 599999999999998766543
No 180
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.53 E-value=6.1e-08 Score=79.72 Aligned_cols=38 Identities=32% Similarity=0.281 Sum_probs=33.2
Q ss_pred CCCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCc
Q 023975 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (274)
Q Consensus 10 ~~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~ 47 (274)
|.+++||+|||||++|+++|++|+ +|++|+|+||....
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPE 41 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCC
Confidence 345689999999999999999997 59999999997643
No 181
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.52 E-value=4.2e-08 Score=84.62 Aligned_cols=39 Identities=26% Similarity=0.486 Sum_probs=35.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCCCceeec
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKEYFEITW 51 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g-~~v~vie~~~~~g~~~ 51 (274)
.+||+|||||++||+||+.|+ .| ++|+|+|+++.+|+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 479999999999999999998 58 9999999999998754
No 182
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.51 E-value=8.6e-08 Score=82.07 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCC---cEEeecEEEEcccC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTG---DTINADCHFLCTGK 217 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g---~~~~~d~vv~a~G~ 217 (274)
.+.+.+.+.+.+ .+|+++++|++|+.+++++.|++.+| +++.||.||+|++.
T Consensus 240 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~ 294 (489)
T 2jae_A 240 RIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPP 294 (489)
T ss_dssp HHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCH
Confidence 355555555532 78999999999998888888887776 67999999999974
No 183
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.50 E-value=8e-08 Score=81.99 Aligned_cols=52 Identities=13% Similarity=0.045 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEEC---CCCcEEeecEEEEcccCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLT---STGDTINADCHFLCTGKP 218 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~---~~g~~~~~d~vv~a~G~~ 218 (274)
.+.+.+.+.+ |++|+++++|++|+.+++.+.|++ .+|+++.||.||+|++..
T Consensus 239 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 239 VLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAH 293 (478)
T ss_dssp HHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHH
T ss_pred HHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHH
Confidence 3555555554 679999999999998777788887 678889999999999854
No 184
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.48 E-value=6.1e-08 Score=81.60 Aligned_cols=35 Identities=29% Similarity=0.467 Sum_probs=30.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.+++||+||||||+|+++|+.|+ +|++|+|+|+.+
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 35589999999999999999998 599999999986
No 185
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.47 E-value=1.1e-07 Score=81.24 Aligned_cols=44 Identities=23% Similarity=0.141 Sum_probs=37.5
Q ss_pred CCCCCcEEEEcCChHHHHHHHHhhc-C-CcEEEEcCCCCceeeccc
Q 023975 10 EGKNKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKEYFEITWAS 53 (274)
Q Consensus 10 ~~~~~~v~IIGaG~aGl~~A~~L~~-g-~~v~vie~~~~~g~~~~~ 53 (274)
+.+++||+|||||++||++|++|++ | .+|+|+|+.+.+|+.+..
T Consensus 6 ~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 6 ELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp -CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 3456899999999999999999974 7 799999999999876554
No 186
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.44 E-value=1.7e-07 Score=77.23 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=35.2
Q ss_pred CcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeecc
Q 023975 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWA 52 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~ 52 (274)
+||+|||||++|+++|+.|++ |++|+|+|+++.+|+...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceE
Confidence 699999999999999999985 999999999998886543
No 187
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.37 E-value=2.8e-07 Score=76.35 Aligned_cols=40 Identities=20% Similarity=0.477 Sum_probs=36.0
Q ss_pred CcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccc
Q 023975 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWAS 53 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~ 53 (274)
+||+|||||++|+++|+.|++ |++|+|+|+++.+|+.+..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 799999999999999999985 9999999999999876543
No 188
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.36 E-value=3.4e-07 Score=77.11 Aligned_cols=57 Identities=9% Similarity=-0.097 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+.+.+.+.+++.|++++++++|++|..+++.+..+..+|+++.||.||+|+|..+
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 468888999899999999999999999877766554445788899999999999875
No 189
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.35 E-value=2.8e-07 Score=74.35 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=32.8
Q ss_pred CCcEEEEcCChHHHHHHHHhhc---CCcEEEEcCCCCce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEYFE 48 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~---g~~v~vie~~~~~g 48 (274)
.+||+|||||++|+++|+.|++ |++|+|+|+...++
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 5899999999999999999973 99999999988765
No 190
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.33 E-value=4e-07 Score=78.09 Aligned_cols=40 Identities=30% Similarity=0.325 Sum_probs=36.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeec
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITW 51 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~ 51 (274)
..+||+|||||++||++|+.|++ |++|+|+|+.+.+|+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 45899999999999999999985 99999999999988654
No 191
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.30 E-value=4e-07 Score=74.47 Aligned_cols=45 Identities=18% Similarity=0.051 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|++++. ++|++++..+ .+.||.||+|+|...
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWA 186 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcCh
Confidence 45778888999999999998 8888775332 267999999999754
No 192
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.28 E-value=4e-07 Score=79.33 Aligned_cols=57 Identities=9% Similarity=-0.190 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEECC---CC--cEEeecEEEEcccCCC
Q 023975 163 PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYLTS---TG--DTINADCHFLCTGKPV 219 (274)
Q Consensus 163 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~---~g--~~~~~d~vv~a~G~~~ 219 (274)
..+...+.+.+++.|+++..+++|+++..+++.+ .|++. +| .++.||.||+|+|...
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 4566777788889999999999999998766543 35432 33 3799999999999764
No 193
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.24 E-value=7.3e-07 Score=73.79 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=31.1
Q ss_pred CcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCCCc
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKEYF 47 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~~~ 47 (274)
+||+|||||++|+++|..|+ . |++|+|+||.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 48999999999999999997 5 9999999998765
No 194
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.18 E-value=1.4e-06 Score=71.06 Aligned_cols=34 Identities=35% Similarity=0.477 Sum_probs=30.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++||+|||||++|+.+|+.|+ +|++|+|+|+.+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 379999999999999999998 5999999998764
No 195
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.17 E-value=6.8e-06 Score=69.78 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=59.9
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEEeeEEEecCe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVASPAINITENE 91 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (274)
.++|+|||+|.+|+-+|..|++ |.+|+++++.+.+-.. .+ ..++.+. ..+..+....
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~----------~~-----------~~~V~~~-~~V~~i~~~~ 254 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY----------KW-----------PENWDER-PNLVRVDTEN 254 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC----------CC-----------CTTEEEC-SCEEEECSSE
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC----------CC-----------CCceEEc-CCeEEEeCCE
Confidence 4789999999999999999974 9999999987653210 00 0122222 2233344456
Q ss_pred EEeCCCeEEecCEEEEccCCCCCCCh
Q 023975 92 VLTAEGRRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 92 v~~~~~~~~~~~~li~a~G~~~~~~~ 117 (274)
+.+.+|.++.+|.+|+|||..|..|-
T Consensus 255 V~~~dG~~i~~D~Vi~atG~~p~~~~ 280 (464)
T 2xve_A 255 AYFADGSSEKVDAIILCTGYIHHFPF 280 (464)
T ss_dssp EEETTSCEEECSEEEECCCBCCCCTT
T ss_pred EEECCCCEEeCCEEEECCCCCCCCCC
Confidence 77889989999999999999877654
No 196
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.17 E-value=1.3e-06 Score=74.45 Aligned_cols=54 Identities=15% Similarity=0.047 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHhC--------CcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccC
Q 023975 164 KAGDKTRDWLISK--------KVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 164 ~~~~~~~~~~~~~--------gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
.+.+.+.+.+.+. |++|+++++|++|+.+++.+.|++.+|+++.||.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 4556666655443 67999999999999888888899999989999999999985
No 197
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.14 E-value=1.9e-06 Score=76.50 Aligned_cols=41 Identities=37% Similarity=0.602 Sum_probs=36.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeec
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~ 51 (274)
...+||+|||||++||++|+.|+ +|++|+|+|+.+.+|+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 146 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 34589999999999999999997 599999999999888653
No 198
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.13 E-value=1.5e-06 Score=76.44 Aligned_cols=59 Identities=14% Similarity=0.112 Sum_probs=44.6
Q ss_pred hCCcEEEcCceeeeeccCCC--c-eeEECC---CCc--EEeecEEEEcccCCCCchhhccccccccc
Q 023975 175 SKKVDVKLGERVNLDSVSEG--S-DTYLTS---TGD--TINADCHFLCTGKPVGSDWLKDTILKDSL 233 (274)
Q Consensus 175 ~~gv~i~~~~~v~~i~~~~~--~-~~v~~~---~g~--~~~~d~vv~a~G~~~~~~~~~~~~~~~~~ 233 (274)
+.|+++++++.|++|..+++ . ..|++. +|+ ++.||.||+|+|..+++.++...+++...
T Consensus 272 ~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~ 338 (623)
T 3pl8_A 272 EERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLG 338 (623)
T ss_dssp EEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCCS
T ss_pred CCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCccc
Confidence 34899999999999986543 2 344442 454 78999999999999988888877765543
No 199
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.12 E-value=2.1e-06 Score=77.66 Aligned_cols=40 Identities=38% Similarity=0.626 Sum_probs=35.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeec
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW 51 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~ 51 (274)
..++|+|||||++||++|+.|+ +|++|+|+|+.+.+|+..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 4589999999999999999997 599999999999888653
No 200
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.09 E-value=4.1e-06 Score=70.56 Aligned_cols=93 Identities=19% Similarity=0.200 Sum_probs=63.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||+.|+.+|..++ .|.+|+++|+.+.+.... .+... ....+.+ .++++... .+..++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~-------d~~~~----~~~~~~l~~~gV~i~~~~~v~~~~ 215 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM-------DADMN----QPILDELDKREIPYRLNEEINAIN 215 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS-------CGGGG----HHHHHHHHHTTCCEEESCCEEEEE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc-------cchhH----HHHHHHhhccceEEEeccEEEEec
Confidence 358999999999999999997 499999999987653111 01100 0000111 13444333 233456
Q ss_pred cCeEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 89 ENEVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~~~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
...+.+++++.+.+|.+++|+|..|...
T Consensus 216 ~~~v~~~~g~~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 216 GNEITFKSGKVEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp TTEEEETTSCEEECSEEEECCCEEESCG
T ss_pred CCeeeecCCeEEeeeeEEEEeceecCcH
Confidence 6678889999999999999999887654
No 201
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.06 E-value=2.7e-05 Score=65.76 Aligned_cols=80 Identities=16% Similarity=0.166 Sum_probs=57.2
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCc-EEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEEeeEEE--e
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SAD-VTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVASPAINI--T 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~-v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 88 (274)
.++|+|||+|.+|+-+|..|++ +.+ |+++++.+.+ + . . .++. .......+ +
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~------l----~----~----------~~i~-~~~~v~~~~~~ 266 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD------I----Q----N----------ESLQ-QVPEITKFDPT 266 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS------C----B----C----------SSEE-EECCEEEEETT
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc------C----C----C----------CCeE-EecCeEEEecC
Confidence 4789999999999999999985 888 9999998654 0 0 0 0111 11122233 2
Q ss_pred cCeEEeCCCeE-EecCEEEEccCCCCCCCh
Q 023975 89 ENEVLTAEGRR-VVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 89 ~~~v~~~~~~~-~~~~~li~a~G~~~~~~~ 117 (274)
...+.+.+|.. +.+|.+|+|||..|..|-
T Consensus 267 ~~~v~~~dG~~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 267 TREIYLKGGKVLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp TTEEEETTTEEECCCSEEEECCCBCCCCCC
T ss_pred CCEEEECCCCEeccCCEEEECCCCCcCCCC
Confidence 34677888876 689999999999887664
No 202
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.06 E-value=2.3e-05 Score=63.85 Aligned_cols=91 Identities=10% Similarity=-0.119 Sum_probs=71.6
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC---------------------CcC--C---------hhHHHHHHHH
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------------EFI--G---------PKAGDKTRDW 172 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~---------------------~~~--~---------~~~~~~~~~~ 172 (274)
.+++|..|+.+|..|. ..+.+++++.+.+.+. +.. . ..+.+.+.+.
T Consensus 8 IIG~G~aGl~~A~~l~--~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (357)
T 4a9w_A 8 VIGGGQSGLSAGYFLR--RSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLAQY 85 (357)
T ss_dssp EECCSHHHHHHHHHHH--HSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHHHH
T ss_pred EECcCHHHHHHHHHHH--HCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHHHH
Confidence 3566788999999988 4578899999875421 100 0 3566777788
Q ss_pred HHhCCcEEEcCceeeeeccCCCcee-EECCCCcEEeecEEEEcccCC
Q 023975 173 LISKKVDVKLGERVNLDSVSEGSDT-YLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 173 ~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~d~vv~a~G~~ 218 (274)
+++.|++++.+++|+++..+++.+. +.+++| ++.+|.||+|+|..
T Consensus 86 ~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 86 EQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 8889999999999999988877777 888888 89999999999963
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.05 E-value=6.3e-06 Score=68.79 Aligned_cols=94 Identities=21% Similarity=0.329 Sum_probs=61.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceee-c-cceeeecCCccccceeeeccccccccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEIT-W-ASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 88 (274)
..+|+|||+|+.|+.+|..|+ .|.+|+++++.+.+... . ..+...+... .. ..++++... .+..+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~--------l~--~~GV~i~~~~~v~~i~ 214 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARY--------HA--AQGVDLRFERSVTGSV 214 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHH--------HH--HTTCEEEESCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHH--------HH--HcCcEEEeCCEEEEEE
Confidence 479999999999999999997 59999999998765311 0 0000000000 00 013444332 222333
Q ss_pred cCeEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 89 ENEVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~~~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
...+.+.+|.++.+|.+++|+|..|...
T Consensus 215 ~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 242 (408)
T 2gqw_A 215 DGVVLLDDGTRIAADMVVVGIGVLANDA 242 (408)
T ss_dssp TTEEEETTSCEEECSEEEECSCEEECCH
T ss_pred CCEEEECCCCEEEcCEEEECcCCCccHH
Confidence 2367778888999999999999987754
No 204
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.05 E-value=1.6e-06 Score=76.86 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=30.7
Q ss_pred CCcEEEEcCChHHHHHHHHhhc------CCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF------SADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~------g~~v~vie~~~~ 46 (274)
.+||+||||||+||++|..|++ |++|+||||.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 4799999999999999999954 999999999764
No 205
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.04 E-value=3.9e-06 Score=71.12 Aligned_cols=93 Identities=18% Similarity=0.275 Sum_probs=57.8
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||++|+.+|..|+ .|.+|+++|+.+.+... .. +.... ...+.+ .++++... .+..+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~---~~----~~~~~----~l~~~l~~~Gv~i~~~~~V~~i~ 235 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT---MD----LEVSR----AAERVFKKQGLTIRTGVRVTAVV 235 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---SC----HHHHH----HHHHHHHHHTCEEECSCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc---cC----HHHHH----HHHHHHHHCCCEEEECCEEEEEE
Confidence 478999999999999999997 59999999998765311 00 00000 000000 13333321 122222
Q ss_pred --cC--eEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 89 --EN--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 --~~--~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
.+ .+.++++.++.+|.+++|+|..|..+
T Consensus 236 ~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 236 PEAKGARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp EETTEEEEEETTSCEEEESEEEECSCEEECCT
T ss_pred EeCCEEEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 22 34555778899999999999887654
No 206
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.02 E-value=1.7e-05 Score=63.75 Aligned_cols=97 Identities=15% Similarity=-0.017 Sum_probs=71.9
Q ss_pred HHHccCCchhhhHHHHhhhhCCCCeEEEEeCC--Ccc--------CCcC----ChhHHHHHHHHHHhCCcEEEcCceeee
Q 023975 123 LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKG--SRL--------LEFI----GPKAGDKTRDWLISKKVDVKLGERVNL 188 (274)
Q Consensus 123 ~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~--~~~--------~~~~----~~~~~~~~~~~~~~~gv~i~~~~~v~~ 188 (274)
+..+++|..|+..|..+. ..+.+++++.+. ... .+.. ...+.+.+.+.+++.|++++. .+|.+
T Consensus 18 vvIIG~G~aGl~aA~~l~--~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 18 VIIVGLGPAAYGAALYSA--RYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEECCSHHHHHHHHHHH--HTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred EEEECccHHHHHHHHHHH--HCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 344566778899999888 457889999985 111 1111 134666677788889999999 89999
Q ss_pred eccCCCceeEECCCCcEEeecEEEEcccCCCCch
Q 023975 189 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 189 i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
+..+++.+.+.+.+|+++.+|.+|+|+|..|...
T Consensus 95 i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENRGDEFVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC--CEEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEecCCEEEEEECCCCEEEcCEEEECcCCCCccC
Confidence 9887778888888888999999999999876543
No 207
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.99 E-value=2.7e-06 Score=71.97 Aligned_cols=94 Identities=16% Similarity=0.246 Sum_probs=59.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||+.|+.+|..|+ .|.+|+++|+.+.+... +. +... ....+.+ .++++... .+..+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---~~----~~~~----~~l~~~l~~~Gv~i~~~~~v~~i~ 235 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS---FD----PMIS----ETLVEVMNAEGPQLHTNAIPKAVV 235 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---SC----HHHH----HHHHHHHHHHSCEEECSCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh---hh----HHHH----HHHHHHHHHCCCEEEeCCEEEEEE
Confidence 469999999999999999997 59999999998764311 00 0000 0000000 13333322 122222
Q ss_pred c---C--eEEeCCCeEEecCEEEEccCCCCCCCh
Q 023975 89 E---N--EVLTAEGRRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 89 ~---~--~v~~~~~~~~~~~~li~a~G~~~~~~~ 117 (274)
. . .+.+.+|.++.+|.+++|+|..|....
T Consensus 236 ~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~ 269 (450)
T 1ges_A 236 KNTDGSLTLELEDGRSETVDCLIWAIGREPANDN 269 (450)
T ss_dssp ECTTSCEEEEETTSCEEEESEEEECSCEEESCTT
T ss_pred EeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCC
Confidence 1 1 466778888999999999999887653
No 208
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.98 E-value=4.3e-05 Score=63.20 Aligned_cols=95 Identities=17% Similarity=0.255 Sum_probs=70.1
Q ss_pred HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHH-------------HHHHHHHhCCcEEEcCceeeee
Q 023975 123 LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGD-------------KTRDWLISKKVDVKLGERVNLD 189 (274)
Q Consensus 123 ~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~gv~i~~~~~v~~i 189 (274)
+..+++|..|+.+|..|. ..+.+++++.+++.+. ...+.+.. ...+.+++.|++++.+++|+.+
T Consensus 12 ~vIvGgG~AGl~aA~~L~--~~~~~itlie~~~~~~-y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~i 88 (385)
T 3klj_A 12 ILILGAGPAGFSAAKAAL--GKCDDITMINSEKYLP-YYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSI 88 (385)
T ss_dssp EEEECCSHHHHHHHHHHT--TTCSCEEEECSSSSCC-BCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEE
T ss_pred EEEEcCcHHHHHHHHHHh--CCCCEEEEEECCCCCC-cccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEE
Confidence 344667888999999984 6788999999877531 11111222 2345667889999999999999
Q ss_pred ccCCCceeEECCCCcEEeecEEEEcccCCCCch
Q 023975 190 SVSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 190 ~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
..+.. .+++++|+++.+|.+|+|||..|..+
T Consensus 89 d~~~~--~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 89 DPNNK--LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp ETTTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred ECCCC--EEEECCCCEEECCEEEEecCCCcCCC
Confidence 75543 67778899999999999999876543
No 209
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.98 E-value=5.1e-06 Score=73.39 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=31.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh---c--CCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ---F--SADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~---~--g~~v~vie~~~~ 46 (274)
.+||+|||||++||+||+.|+ + |.+|+|+||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 479999999999999999998 3 999999999874
No 210
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.97 E-value=5.1e-06 Score=73.36 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c------CCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F------SADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~------g~~v~vie~~~~ 46 (274)
.+||+|||||+|||+||+.|+ . |.+|+|+||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 479999999999999999997 4 999999999754
No 211
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.95 E-value=6.3e-06 Score=71.11 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=59.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEEee-EEE--
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVASPA-INI-- 87 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 87 (274)
...+++|||||+.|+-.|..+++ |.+|+|+++...+..--......+...+ . ..++.+..... ..+
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~D~ei~~~l~~~l--------~--~~gi~~~~~~~v~~~~~ 291 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYM--------E--EQGVMFKNGILPKKLTK 291 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTSCHHHHHHHHHHH--------H--HTTCEEEETCCEEEEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccccchhHHHHHHHHH--------H--hhcceeecceEEEEEEe
Confidence 34789999999999999999985 9999999986543210000000000000 0 01233322211 111
Q ss_pred ecC--eEEeCCCeEEecCEEEEccCCCCCCChh
Q 023975 88 TEN--EVLTAEGRRVVYDYLVIATGHKDPVPKT 118 (274)
Q Consensus 88 ~~~--~v~~~~~~~~~~~~li~a~G~~~~~~~~ 118 (274)
... .+.+.++..+.+|.+++|+|..|+...+
T Consensus 292 ~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L 324 (542)
T 4b1b_A 292 MDDKILVEFSDKTSELYDTVLYAIGRKGDIDGL 324 (542)
T ss_dssp ETTEEEEEETTSCEEEESEEEECSCEEESCGGG
T ss_pred cCCeEEEEEcCCCeEEEEEEEEcccccCCcccc
Confidence 112 4666778888999999999999887653
No 212
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.95 E-value=5.6e-06 Score=71.49 Aligned_cols=36 Identities=42% Similarity=0.567 Sum_probs=31.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhh--cCCcEEEEcCCCCc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ--FSADVTLIDPKEYF 47 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~--~g~~v~vie~~~~~ 47 (274)
..||+||||||++|+.+|.+|+ .+++|+|||++...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 3699999999999999999997 48999999998653
No 213
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=3.4e-06 Score=69.37 Aligned_cols=90 Identities=24% Similarity=0.281 Sum_probs=59.3
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEec
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINITE 89 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~ 89 (274)
.+++|||||+.|+.+|..|+ .|.+|+++++.+.+.. + .+... ....+.+ .++++... ....+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----~----~~~~~----~~l~~~l~~~gV~i~~~~~v~~i~~ 211 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG----L----DEELS----NMIKDMLEETGVKFFLNSELLEANE 211 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT----C----CHHHH----HHHHHHHHHTTEEEECSCCEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc----C----CHHHH----HHHHHHHHHCCCEEEcCCEEEEEEe
Confidence 68999999999999999997 5999999999876531 1 10000 0000001 13444322 2233334
Q ss_pred CeEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 90 NEVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 90 ~~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
..+.+++|. +.+|.+++|+|..|..+
T Consensus 212 ~~v~~~~g~-i~~D~vi~a~G~~p~~~ 237 (367)
T 1xhc_A 212 EGVLTNSGF-IEGKVKICAIGIVPNVD 237 (367)
T ss_dssp SEEEETTEE-EECSCEEEECCEEECCH
T ss_pred eEEEECCCE-EEcCEEEECcCCCcCHH
Confidence 467777887 99999999999987764
No 214
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.94 E-value=1e-05 Score=67.02 Aligned_cols=94 Identities=19% Similarity=0.303 Sum_probs=59.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeec--cceeeecCCccccceeeeccccccccEEEEEe-eEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW--ASLRAMVEPSFGKRSVINHTDYLVNGRIVASP-AINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 88 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++|+.+.+.... ..+...+... ..+ .++++.... +..+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~--------l~~--~gv~i~~~~~v~~i~ 214 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAG--------LEG--LGVRFHLGPVLASLK 214 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHH--------HHT--TTCEEEESCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHH--------HHH--cCCEEEeCCEEEEEE
Confidence 479999999999999999997 599999999987643210 0000000000 000 133443221 22222
Q ss_pred --cC--eEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 89 --EN--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 --~~--~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
.. .+.+++|.++.+|.+++|+|..|...
T Consensus 215 ~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~ 246 (384)
T 2v3a_A 215 KAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTE 246 (384)
T ss_dssp EETTEEEEEETTSCEEEESEEEECSCEEECCH
T ss_pred ecCCEEEEEECCCCEEECCEEEECcCCCcCHH
Confidence 22 46677888899999999999987753
No 215
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.93 E-value=5.4e-06 Score=70.40 Aligned_cols=95 Identities=19% Similarity=0.289 Sum_probs=58.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEEEe--
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT-- 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 88 (274)
..+++|||||+.|+.+|..|+ .|.+|+++++.+.+... +. +........... ..++++... .+..+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~---~~----~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ---FD----PLLSATLAENMH--AQGIETHLEFAVAALERD 236 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---SC----HHHHHHHHHHHH--HTTCEEESSCCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc---cC----HHHHHHHHHHHH--HCCCEEEeCCEEEEEEEe
Confidence 468999999999999999997 59999999998764311 00 000000000000 012333221 111221
Q ss_pred c--CeEEeCCCe-EEecCEEEEccCCCCCCC
Q 023975 89 E--NEVLTAEGR-RVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~--~~v~~~~~~-~~~~~~li~a~G~~~~~~ 116 (274)
. ..+.+++|. ++.+|.+++|+|..|...
T Consensus 237 ~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 237 AQGTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp TTEEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred CCeEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 1 156677887 899999999999988764
No 216
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.93 E-value=9e-05 Score=59.87 Aligned_cols=92 Identities=16% Similarity=0.057 Sum_probs=70.0
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC---------------CcC----ChhHHHHHHHHHHhCCcEEEcCce
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------EFI----GPKAGDKTRDWLISKKVDVKLGER 185 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~---------------~~~----~~~~~~~~~~~~~~~gv~i~~~~~ 185 (274)
.+++|..|+..|..+. ..+.+++++.+.+.+. +.. ...+.+.+.+.+++.+++++.+++
T Consensus 10 IIG~G~aGl~aA~~l~--~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 87 (335)
T 2zbw_A 10 IVGAGPTGLFAGFYVG--MRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLGER 87 (335)
T ss_dssp EECCSHHHHHHHHHHH--HTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEESCC
T ss_pred EECCCHHHHHHHHHHH--hCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeCCE
Confidence 3566778888888887 4578899999875431 011 134556666777788999999999
Q ss_pred eeeeccCCCceeEECCCCcEEeecEEEEcccCC
Q 023975 186 VNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 186 v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
|..+..+++.+.+.+.+|+++.+|.||+|+|..
T Consensus 88 v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 88 AETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred EEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 999987666677888888889999999999984
No 217
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.92 E-value=6.7e-06 Score=71.35 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=32.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCc
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~ 47 (274)
...+|++|||+|++|+.+|.+|+ .|.+|+|+|++...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34689999999999999999997 49999999998743
No 218
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.92 E-value=4.6e-06 Score=70.72 Aligned_cols=93 Identities=17% Similarity=0.262 Sum_probs=55.7
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||++|+.+|..|++ |.+|+++|+.+.+... +. +.... ...+.+ .++++... .+..+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---~~----~~~~~----~l~~~l~~~gv~i~~~~~v~~i~ 239 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT---YD----SELTA----PVAESLKKLGIALHLGHSVEGYE 239 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---SC----HHHHH----HHHHHHHHHTCEEETTCEEEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc---cC----HHHHH----HHHHHHHHCCCEEEECCEEEEEE
Confidence 4799999999999999999974 9999999998765411 00 00000 000000 12333211 111222
Q ss_pred cC--eEEeCCC--eEEecCEEEEccCCCCCCC
Q 023975 89 EN--EVLTAEG--RRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~~--~v~~~~~--~~~~~~~li~a~G~~~~~~ 116 (274)
.. .+...+| .++.+|.+++|+|..|..+
T Consensus 240 ~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 240 NGCLLANDGKGGQLRLEADRVLVAVGRRPRTK 271 (458)
T ss_dssp TTEEEEECSSSCCCEECCSCEEECCCEEECCS
T ss_pred eCCEEEEECCCceEEEECCEEEECcCCCcCCC
Confidence 11 1222245 5799999999999987765
No 219
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.92 E-value=5.9e-06 Score=70.21 Aligned_cols=96 Identities=25% Similarity=0.308 Sum_probs=57.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEEEe--
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT-- 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 88 (274)
..+++|||||+.|+.+|..|+ .|.+|+|+|+.+.+... .. +.... .+.... ...++++... .+..+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---~~----~~~~~-~l~~~l-~~~gV~i~~~~~v~~i~~~ 239 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ---GD----PETAA-LLRRAL-EKEGIRVRTKTKAVGYEKK 239 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---SC----HHHHH-HHHHHH-HHTTCEEECSEEEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc---cC----HHHHH-HHHHHH-HhcCCEEEcCCEEEEEEEe
Confidence 479999999999999999997 59999999998765311 00 00000 000000 0013333322 122222
Q ss_pred cC--eEEeC-C--Ce--EEecCEEEEccCCCCCCCh
Q 023975 89 EN--EVLTA-E--GR--RVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 89 ~~--~v~~~-~--~~--~~~~~~li~a~G~~~~~~~ 117 (274)
.. .+.+. + |. ++.+|.+++|+|..|..+.
T Consensus 240 ~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 240 KDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp TTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred CCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 12 34443 4 65 7899999999999887654
No 220
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.91 E-value=5e-06 Score=73.47 Aligned_cols=35 Identities=29% Similarity=0.526 Sum_probs=32.2
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-C--------CcEEEEcCCC-Cc
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-S--------ADVTLIDPKE-YF 47 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g--------~~v~vie~~~-~~ 47 (274)
.++|+|||||++||+||+.|++ | ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 4799999999999999999974 7 9999999998 88
No 221
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.89 E-value=1e-05 Score=69.39 Aligned_cols=93 Identities=14% Similarity=0.204 Sum_probs=58.6
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||+.|+.+|..|++ |.+|+++++.+.+... +. +.... ...+.+ .++++... .+..+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---~d----~~~~~----~l~~~l~~~gv~i~~~~~v~~i~ 244 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK---FD----ESVIN----VLENDMKKNNINIVTFADVVEIK 244 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT---SC----HHHHH----HHHHHHHHTTCEEECSCCEEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc---cc----hhhHH----HHHHHHHhCCCEEEECCEEEEEE
Confidence 4799999999999999999974 9999999998765311 10 00000 000000 13333222 112222
Q ss_pred --c-C--eEEeCCCeE-EecCEEEEccCCCCCCC
Q 023975 89 --E-N--EVLTAEGRR-VVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 --~-~--~v~~~~~~~-~~~~~li~a~G~~~~~~ 116 (274)
. . .+.+++|.+ +.+|.+++|+|..|...
T Consensus 245 ~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 245 KVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp ESSTTCEEEEETTSCEEEEESEEEECCCBCCTTT
T ss_pred EcCCceEEEEECCCcEEEECCEEEECCCCCcCCC
Confidence 1 1 466677877 89999999999998764
No 222
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.89 E-value=2.3e-05 Score=63.17 Aligned_cols=90 Identities=11% Similarity=0.062 Sum_probs=69.4
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC---------------CcC----ChhHHHHHHHHHHhCCcEEEcCce
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL---------------EFI----GPKAGDKTRDWLISKKVDVKLGER 185 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~---------------~~~----~~~~~~~~~~~~~~~gv~i~~~~~ 185 (274)
.+++|..|+..|..+. ..+.+++++.+.+.+. +.. ...+...+.+.+++.|++++.+++
T Consensus 12 IIG~G~aGl~aA~~l~--~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3lzw_A 12 IIGGGPVGLFTAFYGG--MRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLEQA 89 (332)
T ss_dssp EECCSHHHHHHHHHHH--HTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECSCC
T ss_pred EECCCHHHHHHHHHHH--HCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEccCE
Confidence 3455777888888887 4578999999876421 111 134566677778888999999999
Q ss_pred eeeeccCCC-ceeEECCCCcEEeecEEEEcccC
Q 023975 186 VNLDSVSEG-SDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 186 v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
|.++..+++ .+.+.+.+|+ +.+|.||+|+|.
T Consensus 90 v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 90 VESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp EEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred EEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 999987765 6778888886 999999999998
No 223
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.88 E-value=6.9e-06 Score=69.42 Aligned_cols=97 Identities=23% Similarity=0.225 Sum_probs=58.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEEEec
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (274)
..++++|||+|++|+.+|..|+ .|.+|+++|+.+.+.... + .+.+......... ..++++... .+..+..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--~----~~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~ 219 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY--L----DKEFTDVLTEEME--ANNITIATGETVERYEG 219 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT--C----CHHHHHHHHHHHH--TTTEEEEESCCEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc--C----CHHHHHHHHHHHH--hCCCEEEcCCEEEEEEc
Confidence 3579999999999999999997 599999999987653110 0 0000000000000 013444332 2223322
Q ss_pred C----eEEeCCCeEEecCEEEEccCCCCCCCh
Q 023975 90 N----EVLTAEGRRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 90 ~----~v~~~~~~~~~~~~li~a~G~~~~~~~ 117 (274)
. .+.+ ++.++.+|.+++|+|..|..+.
T Consensus 220 ~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~ 250 (447)
T 1nhp_A 220 DGRVQKVVT-DKNAYDADLVVVAVGVRPNTAW 250 (447)
T ss_dssp SSBCCEEEE-SSCEEECSEEEECSCEEESCGG
T ss_pred cCcEEEEEE-CCCEEECCEEEECcCCCCChHH
Confidence 1 2444 4568999999999999877654
No 224
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.83 E-value=1.7e-05 Score=66.05 Aligned_cols=94 Identities=20% Similarity=0.267 Sum_probs=59.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeec--cceeeecCCccccceeeeccccccccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITW--ASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 88 (274)
..+++|||+|+.|+.+|..|. .|.+|+++++.+.+.... ..+...+...+ . ..++++... .+..+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l--------~--~~GV~i~~~~~v~~i~ 211 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRH--------S--GAGIRMHYGVRATEIA 211 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHH--------H--HTTCEEECSCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHH--------H--hCCcEEEECCEEEEEE
Confidence 468999999999999999997 599999999987653110 00000000000 0 013343322 122222
Q ss_pred --cC---eEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 89 --EN---EVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 --~~---~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
.. .+.+++|+++.+|.+|+|+|..|...
T Consensus 212 ~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~ 244 (404)
T 3fg2_P 212 AEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVE 244 (404)
T ss_dssp EETTEEEEEEETTSCEEECSEEEECCCEEECCH
T ss_pred ecCCcEEEEEeCCCCEEEcCEEEECcCCccCHH
Confidence 11 46778898999999999999987653
No 225
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.82 E-value=1.2e-05 Score=68.54 Aligned_cols=92 Identities=17% Similarity=0.209 Sum_probs=57.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||+.|+.+|..|+ .|.+|+++++.+.+... +. +.... ...+.+ .++++... .+..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---~d----~~~~~----~l~~~l~~~Gv~i~~~~~v~~i~ 253 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK---FD----ECIQN----TITDHYVKEGINVHKLSKIVKVE 253 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---SC----HHHHH----HHHHHHHHHTCEEECSCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc---cC----HHHHH----HHHHHHHhCCeEEEeCCEEEEEE
Confidence 478999999999999999997 59999999998764311 10 00000 000000 13333222 111221
Q ss_pred c------CeEEeCCC-eEEecCEEEEccCCCCCC
Q 023975 89 E------NEVLTAEG-RRVVYDYLVIATGHKDPV 115 (274)
Q Consensus 89 ~------~~v~~~~~-~~~~~~~li~a~G~~~~~ 115 (274)
. ..+.+++| .++.+|.+++|+|..|..
T Consensus 254 ~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 254 KNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp ECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred EcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 1 14667788 789999999999988765
No 226
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.81 E-value=2.3e-05 Score=65.50 Aligned_cols=94 Identities=21% Similarity=0.193 Sum_probs=60.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeecccc--ccccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDY--LVNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~ 88 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+.... + .+.. .....+. ..++++... .+..+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~--~----~~~~----~~~l~~~l~~~GV~i~~~~~v~~i~ 221 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV--A----GEAL----SEFYQAEHRAHGVDLRTGAAMDCIE 221 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT--S----CHHH----HHHHHHHHHHTTCEEEETCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh--c----CHHH----HHHHHHHHHhCCCEEEECCEEEEEE
Confidence 478999999999999999997 599999999987653100 0 0000 0000000 013444322 222222
Q ss_pred c---C--eEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 89 E---N--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~---~--~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
. + .+.+++|+++.+|.+|+|+|..|...
T Consensus 222 ~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~ 254 (415)
T 3lxd_A 222 GDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVG 254 (415)
T ss_dssp ESSSBEEEEEESSSCEEECSEEEECSCCEESCH
T ss_pred ecCCcEEEEEeCCCCEEEcCEEEECCCCccChH
Confidence 1 1 47778898999999999999987753
No 227
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.80 E-value=8.2e-05 Score=60.82 Aligned_cols=93 Identities=16% Similarity=0.105 Sum_probs=70.5
Q ss_pred HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC-------C--------cC----ChhHHHHHHHHHHhCCcEEEcCc
Q 023975 124 NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL-------E--------FI----GPKAGDKTRDWLISKKVDVKLGE 184 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~-------~--------~~----~~~~~~~~~~~~~~~gv~i~~~~ 184 (274)
..+++|..|+.+|..+. ..+.+++++.+.+.+. + .. ...+.+.+.+.+++.+++++.++
T Consensus 18 vIIG~G~aGl~aA~~l~--~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 95 (360)
T 3ab1_A 18 TIIGGGPTGIFAAFQCG--MNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNE 95 (360)
T ss_dssp EEECCSHHHHHHHHHHH--HTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECSC
T ss_pred EEECCCHHHHHHHHHHH--hCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcCC
Confidence 34556778888888887 4578899998865431 1 11 13456667777888899999999
Q ss_pred eeeeeccCCC-ceeEECCCCcEEeecEEEEcccCC
Q 023975 185 RVNLDSVSEG-SDTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 185 ~v~~i~~~~~-~~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
+|+.+..+++ .+.+.+.+|+++.+|.||+|+|..
T Consensus 96 ~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 96 TVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp CEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred EEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 9999987654 677888888899999999999984
No 228
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.79 E-value=1.3e-05 Score=69.33 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=32.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhhcCCcEEEEcCCCCc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEYF 47 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~g~~v~vie~~~~~ 47 (274)
..+|++|||||.+|+.+|..|++|.+|+|+|++...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCc
Confidence 358999999999999999999779999999998764
No 229
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.77 E-value=1.2e-05 Score=64.45 Aligned_cols=35 Identities=31% Similarity=0.472 Sum_probs=31.1
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCc
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYF 47 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~ 47 (274)
.++++|||||..|+-+|..|++ |.+|+++++....
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 4789999999999999999985 9999999987653
No 230
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.76 E-value=1e-05 Score=69.00 Aligned_cols=94 Identities=17% Similarity=0.287 Sum_probs=56.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccc-eeeecCCccccceeeeccccccccEEEEE-eeEEEec
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS-LRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (274)
..+++|||||+.|+.+|..|+ .|.+|+++|+.+.+...+.. +...+... .. ..++++... .+..+..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~--------l~--~~gv~i~~~~~v~~i~~ 252 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKF--------LK--KQGLDFKLSTKVISAKR 252 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHH--------HH--HTTCEEECSEEEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHH--------HH--HCCCEEEeCCEEEEEEE
Confidence 479999999999999999997 59999999998765421110 00000000 00 013333322 1222221
Q ss_pred ----C--eEEeC-----CCeEEecCEEEEccCCCCCCC
Q 023975 90 ----N--EVLTA-----EGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 90 ----~--~v~~~-----~~~~~~~~~li~a~G~~~~~~ 116 (274)
+ .+.+. ++.++.+|.+++|+|..|...
T Consensus 253 ~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 253 NDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred ecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 1 23333 346789999999999887764
No 231
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.76 E-value=1.7e-05 Score=67.18 Aligned_cols=95 Identities=21% Similarity=0.294 Sum_probs=56.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEEEe--
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT-- 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 88 (274)
.++++|||||+.|+.+|..|+ .|.+|+++|+.+.+... + .+........... ..++++... .+..+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---~----~~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~~ 240 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG---F----EKQMAAIIKKRLK--KKGVEVVTNALAKGAEER 240 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT---S----CHHHHHHHHHHHH--HTTCEEEESEEEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc---c----CHHHHHHHHHHHH--HCCCEEEeCCEEEEEEEe
Confidence 479999999999999999997 59999999998765311 0 0000000000000 013444322 222222
Q ss_pred cC--eEEeC---CCeEEecCEEEEccCCCCCCC
Q 023975 89 EN--EVLTA---EGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~~--~v~~~---~~~~~~~~~li~a~G~~~~~~ 116 (274)
.. .+.+. ++.++.+|.+++|+|..|..+
T Consensus 241 ~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 241 EDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp TTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred CCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 21 23332 356789999999999987654
No 232
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.75 E-value=9.6e-05 Score=58.50 Aligned_cols=95 Identities=17% Similarity=0.032 Sum_probs=70.0
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCcc---------CCcC----ChhHHHHHHHHHHhC-CcEEEcCceeeeec
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRL---------LEFI----GPKAGDKTRDWLISK-KVDVKLGERVNLDS 190 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~---------~~~~----~~~~~~~~~~~~~~~-gv~i~~~~~v~~i~ 190 (274)
.+++|..|+.+|..|. ..+.+++++.+.+.. .+.. ...+...+.+.+++. ++++.. .+|+.+.
T Consensus 7 IIG~G~aGl~aA~~l~--~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~ 83 (297)
T 3fbs_A 7 IIGGSYAGLSAALQLG--RARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVE-GRVTDAK 83 (297)
T ss_dssp EECCSHHHHHHHHHHH--HTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEE
T ss_pred EECCCHHHHHHHHHHH--hCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEE
Confidence 4567888999999998 457899999875321 1111 124566667777776 788765 4888888
Q ss_pred cCCCceeEECCCCcEEeecEEEEcccCCCCch
Q 023975 191 VSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 191 ~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
.+++.+.+.+.+|+++.+|.||+|+|..|..+
T Consensus 84 ~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 84 GSFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EcCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 77777888899998999999999999876543
No 233
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.75 E-value=0.00013 Score=58.30 Aligned_cols=94 Identities=16% Similarity=0.117 Sum_probs=69.1
Q ss_pred HccCCchhhhHHHHhhhhCCCC-eEEEEeCCCc-----------cCCcC-----ChhHHHHHHHHHHhCCcEEEcCceee
Q 023975 125 QYQAGPTGVELAGEIAVDFPEK-KVTLVHKGSR-----------LLEFI-----GPKAGDKTRDWLISKKVDVKLGERVN 187 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~-~v~~~~~~~~-----------~~~~~-----~~~~~~~~~~~~~~~gv~i~~~~~v~ 187 (274)
.+++|..|+.+|..+. ..+. +++++.+... ..+.+ ...+.+.+.+.+++.|++++. .++.
T Consensus 6 IIG~G~aGl~aA~~l~--~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~ 82 (311)
T 2q0l_A 6 IIGGGPAGLSAGLYAT--RGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQ 82 (311)
T ss_dssp EECCSHHHHHHHHHHH--HTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEE
T ss_pred EECccHHHHHHHHHHH--HCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEEE
Confidence 3566788899998887 3477 8999987521 01111 124566677778888999988 7888
Q ss_pred eeccCCCceeEECCCCcEEeecEEEEcccCCCCc
Q 023975 188 LDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGS 221 (274)
Q Consensus 188 ~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 221 (274)
.+..+++.+.+.+.+|+++.+|.||+|+|..|..
T Consensus 83 ~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 83 RVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EEEEETTEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 8877666667777888899999999999976643
No 234
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.74 E-value=2.1e-05 Score=68.36 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=31.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh--cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ--FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~--~g~~v~vie~~~ 45 (274)
..||+||||||.||+.+|.+|+ .+.+|+|||++.
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4599999999999999999997 389999999987
No 235
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.73 E-value=0.00013 Score=58.99 Aligned_cols=96 Identities=18% Similarity=0.120 Sum_probs=71.2
Q ss_pred HHccCCchhhhHHHHhhhhCCCCeEEEEeCCC----cc------------CCcC-----ChhHHHHHHHHHHhCCcEEEc
Q 023975 124 NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGS----RL------------LEFI-----GPKAGDKTRDWLISKKVDVKL 182 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~----~~------------~~~~-----~~~~~~~~~~~~~~~gv~i~~ 182 (274)
..+++|..|+..|..|. ..+.+++++.+.+ .+ .+.+ ...+...+.+.+++.|++++.
T Consensus 26 vIIG~G~aGl~aA~~l~--~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~ 103 (338)
T 3itj_A 26 TIIGSGPAAHTAAIYLA--RAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIIT 103 (338)
T ss_dssp EEECCSHHHHHHHHHHH--HTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred EEECcCHHHHHHHHHHH--HCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEEEE
Confidence 34555778888999888 4578899998843 11 1111 125667778888889999999
Q ss_pred CceeeeeccCCCceeEEC---CCCcEEeecEEEEcccCCCCch
Q 023975 183 GERVNLDSVSEGSDTYLT---STGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 183 ~~~v~~i~~~~~~~~v~~---~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
++ +..+..+++.+.+.+ .++.++.+|.+|+|+|..|...
T Consensus 104 ~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 104 ET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp SC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred eE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 98 999988777777766 4667899999999999866543
No 236
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.72 E-value=1.3e-05 Score=68.49 Aligned_cols=93 Identities=14% Similarity=0.228 Sum_probs=56.8
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||+.|+.+|..|+ .|.+|+++|+.+.+... + .+.... ...+.+ .++++... .+..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~---~----~~~~~~----~l~~~l~~~gV~i~~~~~v~~i~ 253 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG---A----DRDLVK----VWQKQNEYRFDNIMVNTKTVAVE 253 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---S----CHHHHH----HHHHHHGGGEEEEECSCEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc---c----CHHHHH----HHHHHHHhcCCEEEECCEEEEEE
Confidence 479999999999999999997 49999999998765311 0 000000 000000 12333221 111221
Q ss_pred --cC--eEEeCC----CeEEecCEEEEccCCCCCCC
Q 023975 89 --EN--EVLTAE----GRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 --~~--~v~~~~----~~~~~~~~li~a~G~~~~~~ 116 (274)
.. .+.+.+ +.++.+|.+++|+|..|...
T Consensus 254 ~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 254 PKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EETTEEEEEEESSSCCSSCEEESCEEECCCEEECGG
T ss_pred EcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCC
Confidence 11 344544 66788999999999987654
No 237
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.72 E-value=0.00014 Score=58.03 Aligned_cols=94 Identities=18% Similarity=0.119 Sum_probs=68.3
Q ss_pred ccCCchhhhHHHHhhhhCCCCeEEEEeCCCc--c--------CCc----CChhHHHHHHHHHHhCCcEEEcCceeeeecc
Q 023975 126 YQAGPTGVELAGEIAVDFPEKKVTLVHKGSR--L--------LEF----IGPKAGDKTRDWLISKKVDVKLGERVNLDSV 191 (274)
Q Consensus 126 ~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~--~--------~~~----~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 191 (274)
+++|..|+.+|..+. ..+.++.++.+... . ... ....+...+.+.+++.|++++.++++..+..
T Consensus 7 IG~G~aGl~aA~~l~--~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~ 84 (310)
T 1fl2_A 7 VGSGPAGAAAAIYSA--RKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIP 84 (310)
T ss_dssp ECCSHHHHHHHHHHH--TTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEEC
T ss_pred ECcCHHHHHHHHHHH--HCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEe
Confidence 566788899999888 55788888864310 0 000 0124566677778889999999999999865
Q ss_pred CC---CceeEECCCCcEEeecEEEEcccCCCCc
Q 023975 192 SE---GSDTYLTSTGDTINADCHFLCTGKPVGS 221 (274)
Q Consensus 192 ~~---~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 221 (274)
+. +...+.+++|+++.+|.+|+|+|..|..
T Consensus 85 ~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 85 AAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp CSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred cccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 42 3567888888889999999999986643
No 238
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.72 E-value=1.4e-05 Score=68.43 Aligned_cols=93 Identities=17% Similarity=0.253 Sum_probs=59.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c---CCcEEEEcCCCCceeeccceeeecCCccccceeeecccc--ccccEEEEE-eeE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDY--LVNGRIVAS-PAI 85 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~---g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~ 85 (274)
..+++|||+|..|+.+|..|+ . |.+|+++++.+.+... + .+... ....+. ..+++++.. .+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~---~----d~~~~----~~l~~~l~~~GV~i~~~~~v~ 259 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG---F----DETIR----EEVTKQLTANGIEIMTNENPA 259 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT---S----CHHHH----HHHHHHHHHTTCEEEESCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc---c----CHHHH----HHHHHHHHhCCCEEEeCCEEE
Confidence 468999999999999998886 5 9999999998764311 1 00000 000000 013444332 222
Q ss_pred EEe--c---CeEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 86 NIT--E---NEVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 86 ~~~--~---~~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
.+. . ..+.+.+|.++.+|.+++|+|..|...
T Consensus 260 ~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 260 KVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EEEECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred EEEEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 222 1 156677888899999999999987764
No 239
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.71 E-value=2.8e-05 Score=67.65 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=31.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-C-CcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-S-ADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g-~~v~vie~~~~ 46 (274)
..+|+||||||.||+.+|..|+. + .+|+|||++..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35899999999999999999984 4 79999999876
No 240
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.70 E-value=3.3e-05 Score=66.11 Aligned_cols=94 Identities=26% Similarity=0.346 Sum_probs=56.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecc-ceeeecCCccccceeeeccccccccEEEEE-eeEEE--
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA-SLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINI-- 87 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 87 (274)
..+++|||||+.|+.+|..|+ .|.+|+++++.+.+..... .+...+...+.. .+++... .+..+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~-----------~V~i~~~~~v~~i~~ 242 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQDEEMKRYAEKTFNE-----------EFYFDAKARVISTIE 242 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCCHHHHHHHHHHHHT-----------TSEEETTCEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCCHHHHHHHHHHHhh-----------CcEEEECCEEEEEEE
Confidence 479999999999999999997 5999999999887542110 000000000000 1222111 11111
Q ss_pred ecC--eEEeC--CC--eEEecCEEEEccCCCCCCCh
Q 023975 88 TEN--EVLTA--EG--RRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 88 ~~~--~v~~~--~~--~~~~~~~li~a~G~~~~~~~ 117 (274)
+.. .+.+. +| .++.+|.+++|+|..|....
T Consensus 243 ~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 243 KEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp CSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred cCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 111 23332 56 68899999999999876553
No 241
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.69 E-value=1.6e-05 Score=68.00 Aligned_cols=93 Identities=18% Similarity=0.265 Sum_probs=58.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c---CCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F---SADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAI 85 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~---g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~ 85 (274)
..+++|||||+.|+.+|..|+ . |.+|+++++.+.+... + .+.. .....+.+ .++++... .+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~---~----d~~~----~~~l~~~l~~~GV~i~~~~~v~ 255 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG---F----DSEL----RKQLTEQLRANGINVRTHENPA 255 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT---S----CHHH----HHHHHHHHHHTTEEEEETCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc---c----CHHH----HHHHHHHHHhCCCEEEeCCEEE
Confidence 469999999999999998886 5 9999999998764311 0 0000 00000000 13444322 122
Q ss_pred EEe--c---CeEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 86 NIT--E---NEVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 86 ~~~--~---~~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
.+. . ..+.+++|.++.+|.+++|+|..|...
T Consensus 256 ~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 256 KVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp EEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred EEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCcc
Confidence 222 1 146677887899999999999987654
No 242
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.67 E-value=5.1e-05 Score=63.89 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=70.0
Q ss_pred HHHccCCchhhhHHHHhhh-hCCCCeEEEEeCCCccC--Cc--------C-ChhHHHHHHHHHHhCCcEEEcCceeeeec
Q 023975 123 LNQYQAGPTGVELAGEIAV-DFPEKKVTLVHKGSRLL--EF--------I-GPKAGDKTRDWLISKKVDVKLGERVNLDS 190 (274)
Q Consensus 123 ~~~~~~g~~~~e~a~~l~~-~~~~~~v~~~~~~~~~~--~~--------~-~~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 190 (274)
+..+++|..|+..|..|.+ ...+.+++++.+.+.+. +. . ...+...+.+.+++.|++++. .+++.+.
T Consensus 7 vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~id 85 (437)
T 3sx6_A 7 VVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQID 85 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEEEE
T ss_pred EEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEEEE
Confidence 3446678889999999884 12678999999887541 10 0 011222245667788999985 6888887
Q ss_pred cCCCceeEECCCCcEEeecEEEEcccCCCCchhhc
Q 023975 191 VSEGSDTYLTSTGDTINADCHFLCTGKPVGSDWLK 225 (274)
Q Consensus 191 ~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~~ 225 (274)
.+++ .|.+++|+++.+|.+|+|+|..|+.+.++
T Consensus 86 ~~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~ip 118 (437)
T 3sx6_A 86 AEAQ--NITLADGNTVHYDYLMIATGPKLAFENVP 118 (437)
T ss_dssp TTTT--EEEETTSCEEECSEEEECCCCEECGGGST
T ss_pred cCCC--EEEECCCCEEECCEEEECCCCCcCcccCC
Confidence 5544 67778888999999999999987654443
No 243
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.67 E-value=2.5e-05 Score=66.53 Aligned_cols=95 Identities=20% Similarity=0.270 Sum_probs=57.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||+.|+.+|..|+ .|.+|+++|+.+.+... .+ .+... ....+.+ .++++... .+..+.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--~~----~~~~~----~~l~~~l~~~Gv~i~~~~~v~~i~ 247 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--GI----DMEIS----KNFQRILQKQGFKFKLNTKVTGAT 247 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--SC----CHHHH----HHHHHHHHHTTCEEECSEEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--cc----CHHHH----HHHHHHHHHCCCEEEeCceEEEEE
Confidence 478999999999999999997 59999999998765320 00 00000 0000000 13333221 122222
Q ss_pred --cC---eEE-----eCCCeEEecCEEEEccCCCCCCCh
Q 023975 89 --EN---EVL-----TAEGRRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 89 --~~---~v~-----~~~~~~~~~~~li~a~G~~~~~~~ 117 (274)
.. .+. ..++.++.+|.+++|+|..|....
T Consensus 248 ~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~ 286 (474)
T 1zmd_A 248 KKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKN 286 (474)
T ss_dssp ECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTT
T ss_pred EcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCc
Confidence 11 222 245678999999999999887654
No 244
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.66 E-value=2.3e-05 Score=68.31 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=31.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g 48 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 187 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM 187 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc
Confidence 468999999999999999997 599999999987543
No 245
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.65 E-value=2.8e-05 Score=66.49 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=57.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEEEec
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE 89 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 89 (274)
...+|+|||||+.|+.+|..|+ .|.+|+++++.+.+... .+ .+........... ..++++... .+..+..
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--~~----~~~~~~~l~~~l~--~~GV~i~~~~~v~~i~~ 264 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG--YY----DRDLTDLMAKNME--EHGIQLAFGETVKEVAG 264 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--TS----CHHHHHHHHHHHH--TTTCEEEETCCEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh--HH----HHHHHHHHHHHHH--hCCeEEEeCCEEEEEEc
Confidence 3579999999999999999997 59999999998764310 00 0000000000000 013444322 1222221
Q ss_pred --C--eEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 90 --N--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 90 --~--~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
+ .+.+ ++.++.+|.+++|+|..|..+
T Consensus 265 ~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 265 NGKVEKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp SSSCCEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred CCcEEEEEE-CCcEEECCEEEECCCCCcChH
Confidence 1 2444 567899999999999987764
No 246
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.64 E-value=4.7e-05 Score=66.52 Aligned_cols=58 Identities=9% Similarity=-0.134 Sum_probs=47.9
Q ss_pred ChhHHHHHHHHHHhCCcEEEcCceeeeeccCC--Cce-eEECCCCcEEeecEEEEcccCCC
Q 023975 162 GPKAGDKTRDWLISKKVDVKLGERVNLDSVSE--GSD-TYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
...+.+.+.+.++..|++++++++|.+|..++ +.+ .|+..+|+++.||.||....+.|
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp 437 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLS 437 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBC
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcC
Confidence 34688999999999999999999999998765 444 45567799999999999777655
No 247
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.61 E-value=3.8e-05 Score=65.23 Aligned_cols=94 Identities=16% Similarity=0.231 Sum_probs=56.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||+.|+.+|..|+ .|.+|+++++.+.+... +. +... ....+.+ .++++... .+..+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---~~----~~~~----~~l~~~l~~~gv~i~~~~~v~~i~ 239 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN---ED----ADVS----KEIEKQFKKLGVTILTATKVESIA 239 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---SC----HHHH----HHHHHHHHHHTCEEECSCEEEEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc---cC----HHHH----HHHHHHHHHcCCEEEeCcEEEEEE
Confidence 479999999999999999997 59999999998765311 00 0000 0000000 13333221 112222
Q ss_pred --cC--eEEeC-CC--eEEecCEEEEccCCCCCCCh
Q 023975 89 --EN--EVLTA-EG--RRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 89 --~~--~v~~~-~~--~~~~~~~li~a~G~~~~~~~ 117 (274)
.. .+.+. +| .++.+|.+++|+|..|....
T Consensus 240 ~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 240 DGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp ECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSS
T ss_pred EcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCC
Confidence 11 23332 45 67899999999999887654
No 248
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.59 E-value=0.00032 Score=56.42 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=67.2
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCc-----------cCCcC-----ChhHHHHHHHHHHhCCcEEEcCceeee
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSR-----------LLEFI-----GPKAGDKTRDWLISKKVDVKLGERVNL 188 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~-----------~~~~~-----~~~~~~~~~~~~~~~gv~i~~~~~v~~ 188 (274)
.+++|..|+..|..+. ..+.+++++.+... ..+.+ ...+.+.+.+.+++.|++++. .++..
T Consensus 13 IIG~G~aGl~aA~~l~--~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 89 (325)
T 2q7v_A 13 IIGGGPAGLTAAIYTG--RAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEVQG 89 (325)
T ss_dssp EECCSHHHHHHHHHHH--HTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEE
T ss_pred EECCCHHHHHHHHHHH--HcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEE
Confidence 3455777888888887 45788999988621 01111 124566677778889999987 57888
Q ss_pred eccC--CCc-eeEECCCCcEEeecEEEEcccCCCCc
Q 023975 189 DSVS--EGS-DTYLTSTGDTINADCHFLCTGKPVGS 221 (274)
Q Consensus 189 i~~~--~~~-~~v~~~~g~~~~~d~vv~a~G~~~~~ 221 (274)
+..+ ++. +.+.+.+|+++.+|.||+|+|..|..
T Consensus 90 i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 90 VQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp EEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred EEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 8765 333 66777788899999999999986643
No 249
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.59 E-value=0.00024 Score=57.30 Aligned_cols=93 Identities=20% Similarity=0.068 Sum_probs=67.7
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeC----CCcc------------CCcC-----ChhHHHHHHHHHHhCCcEEEcC
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHK----GSRL------------LEFI-----GPKAGDKTRDWLISKKVDVKLG 183 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~----~~~~------------~~~~-----~~~~~~~~~~~~~~~gv~i~~~ 183 (274)
.+++|..|+.+|..|. ..+.+++++.+ ...+ .+.+ ...+...+.+.+++.|++++.+
T Consensus 13 IIG~G~aGl~~A~~l~--~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~ 90 (333)
T 1vdc_A 13 IVGSGPAAHTAAIYAA--RAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIFTE 90 (333)
T ss_dssp EECCSHHHHHHHHHHH--HTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEECC
T ss_pred EECcCHHHHHHHHHHH--HCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 3455777888888887 34778888887 2211 1111 1245666777788899999998
Q ss_pred ceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCCc
Q 023975 184 ERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVGS 221 (274)
Q Consensus 184 ~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 221 (274)
+ +..+..+++.+.+.+ +|+++.+|.||+|+|..|..
T Consensus 91 ~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 91 T-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp C-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred E-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 7 888887777777877 77889999999999987644
No 250
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.58 E-value=3.4e-05 Score=66.52 Aligned_cols=94 Identities=15% Similarity=0.210 Sum_probs=57.6
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEEEec--
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINITE-- 89 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 89 (274)
.+++|||+|..|+.+|..|+ .|.+|+++++.+.+... + .+........... ..++++... .+..+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~---~----~~~~~~~l~~~l~--~~GV~i~~~~~V~~i~~~~ 285 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI---K----DNETRAYVLDRMK--EQGMEIISGSNVTRIEEDA 285 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC---C----SHHHHHHHHHHHH--HTTCEEESSCEEEEEEECT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc---c----cHHHHHHHHHHHH--hCCcEEEECCEEEEEEEcC
Confidence 79999999999999999997 59999999998764311 0 0000000000000 013333211 1122211
Q ss_pred -C-----eEEeCCCe-EEecCEEEEccCCCCCCC
Q 023975 90 -N-----EVLTAEGR-RVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 90 -~-----~v~~~~~~-~~~~~~li~a~G~~~~~~ 116 (274)
. .+.+++|. ++.+|.+|+|+|..|...
T Consensus 286 ~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 286 NGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp TSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred CCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 1 35666776 899999999999998765
No 251
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.57 E-value=0.00052 Score=56.14 Aligned_cols=93 Identities=19% Similarity=0.117 Sum_probs=67.2
Q ss_pred HccCCchhhhHHHHhhhhCCCC-eEEEEeCCC------c------c-CCc-------C---------------------C
Q 023975 125 QYQAGPTGVELAGEIAVDFPEK-KVTLVHKGS------R------L-LEF-------I---------------------G 162 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~-~v~~~~~~~------~------~-~~~-------~---------------------~ 162 (274)
.+++|..|+.+|..+. ..+. +++++.+.+ . + .+. . .
T Consensus 9 IIGaG~aGl~aA~~l~--~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 86 (369)
T 3d1c_A 9 IIGAGAAGIGMAITLK--DFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHIS 86 (369)
T ss_dssp EECCSHHHHHHHHHHH--HTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSSCB
T ss_pred EECcCHHHHHHHHHHH--HcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccCCC
Confidence 4566788899998887 3466 899998764 0 0 000 0 0
Q ss_pred -hhHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCCC
Q 023975 163 -PKAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 163 -~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
..+...+.+.+++.|++++.+++|.++..+++.+.|.+.++ ++.+|.||+|+|..+.
T Consensus 87 ~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 87 GETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred HHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 12344556667788999999999999987766777877777 5999999999998653
No 252
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.57 E-value=4.4e-05 Score=65.15 Aligned_cols=94 Identities=19% Similarity=0.308 Sum_probs=59.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+... +. +... ....+.+ .++++... .+..+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~---~~----~~~~----~~l~~~l~~~Gv~i~~~~~V~~i~ 259 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN---FD----YDLR----QLLNDAMVAKGISIIYEATVSQVQ 259 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---SC----HHHH----HHHHHHHHHHTCEEESSCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc---cC----HHHH----HHHHHHHHHCCCEEEeCCEEEEEE
Confidence 579999999999999999987 59999999998764311 00 0000 0000000 13333321 222222
Q ss_pred c--C--eEEeCCCeEEecCEEEEccCCCCCCCh
Q 023975 89 E--N--EVLTAEGRRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 89 ~--~--~v~~~~~~~~~~~~li~a~G~~~~~~~ 117 (274)
. . .+.+.+|.++.+|.+++|+|..|....
T Consensus 260 ~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 260 STENCYNVVLTNGQTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp ECSSSEEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred eeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCC
Confidence 1 1 567778888999999999999876654
No 253
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.55 E-value=4.9e-05 Score=64.59 Aligned_cols=94 Identities=22% Similarity=0.300 Sum_probs=56.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc---cccEEEEE-eeEEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL---VNGRIVAS-PAINI 87 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~ 87 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+... + .+... ....+.+ .+++++.. .+..+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---~----d~~~~----~~l~~~l~~~~gv~i~~~~~v~~i 242 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT---L----DEDVT----NALVGALAKNEKMKFMTSTKVVGG 242 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---S----CHHHH----HHHHHHHHHHTCCEEECSCEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc---C----CHHHH----HHHHHHHhhcCCcEEEeCCEEEEE
Confidence 479999999999999999997 59999999998765311 1 00000 0000001 13333321 12222
Q ss_pred e--cC--eEEeC--CC--eEEecCEEEEccCCCCCCCh
Q 023975 88 T--EN--EVLTA--EG--RRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 88 ~--~~--~v~~~--~~--~~~~~~~li~a~G~~~~~~~ 117 (274)
. .. .+.+. +| .++.+|.+++|+|..|....
T Consensus 243 ~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 280 (468)
T 2qae_A 243 TNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGG 280 (468)
T ss_dssp EECSSSEEEEEECC---EEEEEESEEEECSCEEECCTT
T ss_pred EEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCC
Confidence 2 11 23333 55 67899999999999887654
No 254
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.55 E-value=4.7e-05 Score=60.96 Aligned_cols=36 Identities=31% Similarity=0.464 Sum_probs=32.0
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFE 48 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g 48 (274)
.++|+|||||+.|+-+|..|++ |.+|+|+|+.+.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 3689999999999999999985 99999999987653
No 255
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.55 E-value=3.6e-05 Score=66.77 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=31.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh--cCCcEEEEcCCCCc
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ--FSADVTLIDPKEYF 47 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~--~g~~v~vie~~~~~ 47 (274)
.+|++|||||.||+.+|.+|+ ++.+|+|+|++...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 489999999999999999997 48999999998754
No 256
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.55 E-value=3.8e-05 Score=64.98 Aligned_cols=93 Identities=17% Similarity=0.270 Sum_probs=56.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+... .+ .+.+. ....+.+ .++++... .+..+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--~~----~~~~~----~~l~~~l~~~Gv~i~~~~~v~~i~ 218 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK--YF----DKEFT----DILAKDYEAHGVNLVLGSKVAAFE 218 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT--TS----CHHHH----HHHHHHHHHTTCEEEESSCEEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh--hh----hhhHH----HHHHHHHHHCCCEEEcCCeeEEEE
Confidence 468999999999999999997 49999999998754310 00 00000 0000000 13344322 122222
Q ss_pred --cC---eEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 89 --EN---EVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 --~~---~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
.. .+.+ ++.++.+|.+++|+|..|..+
T Consensus 219 ~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 219 EVDDEIITKTL-DGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EETTEEEEEET-TSCEEEESEEEECCCEEECCG
T ss_pred cCCCeEEEEEe-CCCEEECCEEEECcCCCCCHH
Confidence 12 1333 677899999999999987764
No 257
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.55 E-value=6.3e-05 Score=64.58 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=32.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~ 47 (274)
..+|++|||+|++|+.+|..|. +|.+|+|+|++...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4589999999999999999997 59999999998754
No 258
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.54 E-value=0.00018 Score=60.75 Aligned_cols=99 Identities=18% Similarity=0.133 Sum_probs=70.8
Q ss_pred HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC--Cc-C----Ch------hHHHHHHHHHHhCCcEEEcCceeeeec
Q 023975 124 NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--EF-I----GP------KAGDKTRDWLISKKVDVKLGERVNLDS 190 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~--~~-~----~~------~~~~~~~~~~~~~gv~i~~~~~v~~i~ 190 (274)
..+++|..|+..|..+.+..++.+++++.+.+.+. +. . .. .+.....+.+++.|++++.+++|+.+.
T Consensus 6 vIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id 85 (452)
T 3oc4_A 6 VIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVVAMD 85 (452)
T ss_dssp EEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEEEEE
T ss_pred EEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEEEEE
Confidence 34667888999999998666689999999887542 10 0 00 011113456678899999999999998
Q ss_pred cCCCceeEE-CCCCcEEeecEEEEcccCCCCch
Q 023975 191 VSEGSDTYL-TSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 191 ~~~~~~~v~-~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
.+.+.+.+. ..+++++.+|.+|+|||..|..+
T Consensus 86 ~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 86 VENQLIAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp TTTTEEEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred CCCCEEEEEecCceEEEEcCEEEECCCcccCCC
Confidence 777766664 33556899999999999987544
No 259
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.51 E-value=0.00025 Score=61.48 Aligned_cols=95 Identities=17% Similarity=0.099 Sum_probs=69.7
Q ss_pred HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC--------Cc-----------------------------CChhHH
Q 023975 124 NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------EF-----------------------------IGPKAG 166 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~--------~~-----------------------------~~~~~~ 166 (274)
..+++|.+|+.+|..|. ..+.+++++.+.+.+. +. ..+.+.
T Consensus 25 vIIGaG~aGl~aA~~L~--~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei~ 102 (549)
T 4ap3_A 25 VVVGAGIAGLYAIHRFR--SQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEIL 102 (549)
T ss_dssp EEECCSHHHHHHHHHHH--HTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHHH
T ss_pred EEECchHHHHHHHHHHH--hCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHHH
Confidence 34556778888898887 4677999999865321 00 012345
Q ss_pred HHHHHHHHhCCc--EEEcCceeeeeccCCC--ceeEECCCCcEEeecEEEEccc--CCCC
Q 023975 167 DKTRDWLISKKV--DVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTG--KPVG 220 (274)
Q Consensus 167 ~~~~~~~~~~gv--~i~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G--~~~~ 220 (274)
..+.+.+++.++ .++.+++|+++..+++ .+.|.+.+|+++.||.||+|+| ..|.
T Consensus 103 ~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 103 AYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN 162 (549)
T ss_dssp HHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC
T ss_pred HHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 566677778888 8999999999976554 5678889999999999999999 4444
No 260
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.51 E-value=9e-05 Score=63.37 Aligned_cols=94 Identities=18% Similarity=0.215 Sum_probs=56.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||||+.|+.+|..|+ .|.+|+++++.+.+.... .+... ....+.+ .++++... .+..+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------d~~~~----~~l~~~l~~~gV~v~~~~~v~~i~ 266 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGM-------DGEVA----KQLQRMLTKQGIDFKLGAKVTGAV 266 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSS-------CHHHH----HHHHHHHHHTTCEEECSEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccC-------CHHHH----HHHHHHHHhCCCEEEECCeEEEEE
Confidence 478999999999999999997 499999999987654211 00000 0000000 13333221 111221
Q ss_pred --cC--eEEeCC---C--eEEecCEEEEccCCCCCCCh
Q 023975 89 --EN--EVLTAE---G--RRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 89 --~~--~v~~~~---~--~~~~~~~li~a~G~~~~~~~ 117 (274)
.. .+.+.+ | .++.+|.+++|+|..|....
T Consensus 267 ~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 267 KSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTT
T ss_pred EeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCc
Confidence 12 233331 4 67899999999999877654
No 261
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.51 E-value=6.3e-05 Score=64.54 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=32.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g 48 (274)
.+|++|||+|++|+.+|..|+ .|.+|+|+|+....+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 489999999999999999997 599999999987654
No 262
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.50 E-value=4.1e-05 Score=65.11 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=32.0
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFE 48 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g 48 (274)
..+++|||||+.|+.+|..|++ |.+|+++++.+.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 213 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV 213 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc
Confidence 4799999999999999999974 99999999987653
No 263
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.49 E-value=5.2e-05 Score=64.36 Aligned_cols=92 Identities=15% Similarity=0.212 Sum_probs=57.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+... + .+.. .....+.+ .++++... .+..+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~---~----~~~~----~~~l~~~l~~~Gv~i~~~~~v~~i~ 238 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR---F----DQDM----RRGLHAAMEEKGIRILCEDIIQSVS 238 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---S----CHHH----HHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---c----CHHH----HHHHHHHHHHCCCEEECCCEEEEEE
Confidence 579999999999999999987 59999999998754311 0 0000 00000000 13344322 122222
Q ss_pred c---C--eEE-eCCCeEEecCEEEEccCCCCCCC
Q 023975 89 E---N--EVL-TAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~---~--~v~-~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
. . .+. +++|. +.+|.+++|+|..|...
T Consensus 239 ~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 239 ADADGRRVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp ECTTSCEEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred EcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 1 1 466 77887 99999999999886654
No 264
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.49 E-value=0.00037 Score=58.50 Aligned_cols=98 Identities=18% Similarity=0.129 Sum_probs=66.8
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC---cCC----------hhHHHHHHHHHHhCCcEEEcCceeeeecc
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---FIG----------PKAGDKTRDWLISKKVDVKLGERVNLDSV 191 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 191 (274)
.+++|..|+..|..+.+.-...+++++.+.+.+.- ... ..+.....+.+++.|++++.++.|+.+..
T Consensus 9 IIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~ 88 (431)
T 1q1r_A 9 IVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQVTAINR 88 (431)
T ss_dssp EECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCEEEEET
T ss_pred EEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEEEEEEC
Confidence 45667889999998884333337999987654210 000 01111123566788999999999999876
Q ss_pred CCCceeEECCCCcEEeecEEEEcccCCCCchhh
Q 023975 192 SEGSDTYLTSTGDTINADCHFLCTGKPVGSDWL 224 (274)
Q Consensus 192 ~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~ 224 (274)
++. .+.+++|+++.+|.+|+|||..|..+.+
T Consensus 89 ~~~--~v~~~~g~~~~~d~lviAtG~~p~~~~i 119 (431)
T 1q1r_A 89 DRQ--QVILSDGRALDYDRLVLATGGRPRPLPV 119 (431)
T ss_dssp TTT--EEEETTSCEEECSEEEECCCEEECCCGG
T ss_pred CCC--EEEECCCCEEECCEEEEcCCCCccCCCC
Confidence 543 5677788899999999999987765433
No 265
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.48 E-value=7e-05 Score=64.20 Aligned_cols=95 Identities=16% Similarity=0.195 Sum_probs=57.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEEEe--
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT-- 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 88 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+... + .+........... ..++++... .+..+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---~----d~~~~~~l~~~l~--~~GV~i~~~~~V~~i~~~ 252 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY---E----DADAALVLEESFA--ERGVRLFKNARAASVTRT 252 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC---S----SHHHHHHHHHHHH--HTTCEEETTCCEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---c----CHHHHHHHHHHHH--HCCCEEEeCCEEEEEEEe
Confidence 478999999999999999987 59999999998765311 0 0000000000000 012333211 111221
Q ss_pred cC--eEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 89 EN--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~~--~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
.. .+.+.++.++.+|.+++|+|..|...
T Consensus 253 ~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 253 GAGVLVTMTDGRTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp SSSEEEEETTSCEEEESEEEECCCEEECCS
T ss_pred CCEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 11 34556777899999999999887653
No 266
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.47 E-value=9.1e-05 Score=62.90 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=31.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g 48 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 208 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL 208 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC
Confidence 478999999999999999997 599999999987653
No 267
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.47 E-value=6.6e-05 Score=63.97 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=31.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFE 48 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g 48 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 479999999999999999997 599999999977643
No 268
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.47 E-value=0.00011 Score=63.75 Aligned_cols=36 Identities=31% Similarity=0.445 Sum_probs=32.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-c-CCcEEEEcCCCCc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEYF 47 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~-g~~v~vie~~~~~ 47 (274)
+.+|++|||+|++|+.+|.+|+ . |.+|+|+|++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 4689999999999999999997 3 8999999998754
No 269
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.46 E-value=0.00011 Score=64.18 Aligned_cols=36 Identities=31% Similarity=0.421 Sum_probs=32.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh--cCCcEEEEcCCCCc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ--FSADVTLIDPKEYF 47 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~--~g~~v~vie~~~~~ 47 (274)
..+|++|||+|++|+.+|..|+ +|.+|+|+|++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 4589999999999999999996 49999999998654
No 270
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.46 E-value=0.00074 Score=58.37 Aligned_cols=92 Identities=14% Similarity=0.005 Sum_probs=67.9
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC--------CcC-----------------------------ChhHHH
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------EFI-----------------------------GPKAGD 167 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~--------~~~-----------------------------~~~~~~ 167 (274)
.+++|.+|+.+|..|.+ ..+.+++++.+.+.+. +.. .+.+.+
T Consensus 13 IIGaG~aGl~aA~~L~~-~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ei~~ 91 (540)
T 3gwf_A 13 VIGAGFGGIYAVHKLHH-ELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPEILE 91 (540)
T ss_dssp EECCSHHHHHHHHHHHH-TTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHHHHH
T ss_pred EECcCHHHHHHHHHHHH-cCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHHHHH
Confidence 35567778888888872 2567899999865321 000 123455
Q ss_pred HHHHHHHhCCc--EEEcCceeeeeccCCC--ceeEECCCCcEEeecEEEEcccC
Q 023975 168 KTRDWLISKKV--DVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 168 ~~~~~~~~~gv--~i~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
.+.+.+++.|+ .++.+++|+++..+++ .+.|.+++|+++.||.||+|+|.
T Consensus 92 ~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 92 YLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred HHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 66677788888 8999999999986654 66788899999999999999995
No 271
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.44 E-value=0.00071 Score=56.38 Aligned_cols=96 Identities=21% Similarity=0.296 Sum_probs=67.7
Q ss_pred HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHH-------------HHHHHHHhCCcEEEcCceeeeec
Q 023975 124 NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGD-------------KTRDWLISKKVDVKLGERVNLDS 190 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~gv~i~~~~~v~~i~ 190 (274)
..+++|..|+..|..|.+.-...+++++.+.+.+. ...+.+.. ...+.+++.|++++.+++++.+.
T Consensus 6 vIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id 84 (410)
T 3ef6_A 6 AIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-YDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTALD 84 (410)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-BCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEEEE
T ss_pred EEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-cCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEEEE
Confidence 34667888999999998544445699998876531 11111211 12245667899999999999987
Q ss_pred cCCCceeEECCCCcEEeecEEEEcccCCCCch
Q 023975 191 VSEGSDTYLTSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 191 ~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
.+. ..+.+.+|+++.+|.+|+|||..|..+
T Consensus 85 ~~~--~~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 85 VQT--RTISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp TTT--TEEEETTSCEEECSEEEECCCEEECCC
T ss_pred CCC--CEEEECCCCEEECCEEEEccCCcccCC
Confidence 543 467778888999999999999876543
No 272
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.44 E-value=0.00054 Score=58.97 Aligned_cols=94 Identities=19% Similarity=0.155 Sum_probs=69.7
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCc--cC-----------C-cCChhHHHHHHHHHHhCCcEEEcCceeeeec
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSR--LL-----------E-FIGPKAGDKTRDWLISKKVDVKLGERVNLDS 190 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~--~~-----------~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 190 (274)
.+++|..|+..|..+. ..+.++.++.+... .. + ...+.+...+.+.+++.|++++.++++..+.
T Consensus 217 IIGgG~AGl~aA~~la--~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~ 294 (521)
T 1hyu_A 217 IVGSGPAGAAAAVYSA--RKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLV 294 (521)
T ss_dssp EECCSHHHHHHHHHHH--HTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEE
T ss_pred EECCcHHHHHHHHHHH--hCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEE
Confidence 3566999999999988 45788888865310 00 0 1123466777788888999999999999986
Q ss_pred cC---CCceeEECCCCcEEeecEEEEcccCCCC
Q 023975 191 VS---EGSDTYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 191 ~~---~~~~~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
.+ ++...+.+++|+++.+|.||+|+|..|.
T Consensus 295 ~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 295 PAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp CCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred eccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 43 2356788888889999999999997654
No 273
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.42 E-value=9.2e-05 Score=63.05 Aligned_cols=93 Identities=18% Similarity=0.287 Sum_probs=56.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccc--cccEEEEE-eeEEEe
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYL--VNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 88 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+..... +.. .....+.+ .++++... .+..+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~-------~~~----~~~l~~~l~~~Gv~v~~~~~v~~i~ 248 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVD-------EQV----AKEAQKILTKQGLKILLGARVTGTE 248 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSC-------HHH----HHHHHHHHHHTTEEEEETCEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcccC-------HHH----HHHHHHHHHhCCCEEEECCEEEEEE
Confidence 478999999999999999997 5999999999876531110 000 00000000 13444322 122222
Q ss_pred --cC--eEEeCCC---eEEecCEEEEccCCCCCCC
Q 023975 89 --EN--EVLTAEG---RRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 --~~--~v~~~~~---~~~~~~~li~a~G~~~~~~ 116 (274)
.. .+.+.++ .++.+|.+++|+|..|...
T Consensus 249 ~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 249 VKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp ECSSCEEEEEESSSEEEEEEESEEEECSCEEECCT
T ss_pred EcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCC
Confidence 11 3444443 5789999999999886653
No 274
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.41 E-value=8.7e-05 Score=62.34 Aligned_cols=91 Identities=18% Similarity=0.193 Sum_probs=65.2
Q ss_pred HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcCChhHHH-------------HHHHHHHhCCcEEEcCceeeeec
Q 023975 124 NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFIGPKAGD-------------KTRDWLISKKVDVKLGERVNLDS 190 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~gv~i~~~~~v~~i~ 190 (274)
-.+++|..|+.+|..|.+..++.+|+++.+++.+. +.+.+.. .+.+.+++.|++++.+ +|++|.
T Consensus 6 vIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~--~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~Id 82 (430)
T 3hyw_A 6 VVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG--FTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESID 82 (430)
T ss_dssp EEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE--CGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEEE
T ss_pred EEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc--cCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEEE
Confidence 34677888999999998666678999999887532 1111111 1234456679999866 688876
Q ss_pred cCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 191 VSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 191 ~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
.+ ...|++++|+++.+|.+|+|||..+
T Consensus 83 ~~--~~~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 83 PD--ANTVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp TT--TTEEEETTCCEEECSEEEECCCCEE
T ss_pred CC--CCEEEECCCCEEECCEEEEeCCCCc
Confidence 44 3467889999999999999999764
No 275
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.40 E-value=0.0008 Score=53.56 Aligned_cols=94 Identities=17% Similarity=0.108 Sum_probs=58.9
Q ss_pred cCCchhhhHHHHhhhhCCCCeEEEEeCCCcc------CCc------C-ChhHHHHHHHHHHhCC-cEEEcCceeeeeccC
Q 023975 127 QAGPTGVELAGEIAVDFPEKKVTLVHKGSRL------LEF------I-GPKAGDKTRDWLISKK-VDVKLGERVNLDSVS 192 (274)
Q Consensus 127 ~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~------~~~------~-~~~~~~~~~~~~~~~g-v~i~~~~~v~~i~~~ 192 (274)
++|+.|+..|..++ ..+.+++++.+.... .+. . .+.+.+...+.+.+.+ +.+.....+.....+
T Consensus 13 GaGpAGlsAA~~la--r~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (304)
T 4fk1_A 13 GAGPAGLNASLVLG--RARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQS 90 (304)
T ss_dssp CCSHHHHHHHHHHH--HTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECT
T ss_pred CCCHHHHHHHHHHH--HCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecC
Confidence 44566777777776 457889999875320 011 1 1234444445555554 555554444333344
Q ss_pred CCceeEECCCCcEEeecEEEEcccCCCCch
Q 023975 193 EGSDTYLTSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 193 ~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
.+...+.+.+|+++.+|.||+|||..|..+
T Consensus 91 ~~~~~v~~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 91 TGLFEIVTKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp TSCEEEEETTCCEEEEEEEEECCCCEEECC
T ss_pred CCcEEEEECCCCEEEeCEEEEccCCccccc
Confidence 556788899999999999999999876543
No 276
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.38 E-value=0.00059 Score=57.60 Aligned_cols=97 Identities=13% Similarity=0.114 Sum_probs=65.9
Q ss_pred HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC------cC------ChhHHHHHHHHH-HhCCcEEEcCceeeeec
Q 023975 124 NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE------FI------GPKAGDKTRDWL-ISKKVDVKLGERVNLDS 190 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~------~~------~~~~~~~~~~~~-~~~gv~i~~~~~v~~i~ 190 (274)
..+++|..|+..|..|.+..++.+++++.+.+.+.. .. ...+.....+.+ ++.|++++.++++..+.
T Consensus 7 vIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~ 86 (449)
T 3kd9_A 7 VIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVD 86 (449)
T ss_dssp EEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEEEEEC
T ss_pred EEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEEEEEe
Confidence 345678889999999986656889999998775311 00 001111122333 67899999999999886
Q ss_pred cCCCceeEECCCC-cEEeecEEEEcccCCCCch
Q 023975 191 VSEGSDTYLTSTG-DTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 191 ~~~~~~~v~~~~g-~~~~~d~vv~a~G~~~~~~ 222 (274)
.+ ...+.++++ .++.+|.+|+|||..|..+
T Consensus 87 ~~--~~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 87 TG--YVRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp SS--EEEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred cC--CCEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 43 456777777 4899999999999876543
No 277
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.38 E-value=0.00056 Score=54.75 Aligned_cols=93 Identities=13% Similarity=0.129 Sum_probs=66.5
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCc-----------cCCcC-----ChhHHHHHHHHHHhCCcEEEcCceeee
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSR-----------LLEFI-----GPKAGDKTRDWLISKKVDVKLGERVNL 188 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~-----------~~~~~-----~~~~~~~~~~~~~~~gv~i~~~~~v~~ 188 (274)
.+++|..|+.+|..+. ..+.+++++.+... ..+.+ ...+.+.+.+.+++.|++++.++ +..
T Consensus 10 IIG~G~aGl~aA~~l~--~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~ 86 (320)
T 1trb_A 10 ILGSGPAGYTAAVYAA--RANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-INK 86 (320)
T ss_dssp EECCSHHHHHHHHHHH--TTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-EEE
T ss_pred EECcCHHHHHHHHHHH--HCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-eeE
Confidence 3456778888888887 45778888875310 01111 13456667777888999999986 888
Q ss_pred eccCCCceeEECCCCcEEeecEEEEcccCCCCc
Q 023975 189 DSVSEGSDTYLTSTGDTINADCHFLCTGKPVGS 221 (274)
Q Consensus 189 i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 221 (274)
+..+++.+.+ +.+++++.+|.+|+|+|..|..
T Consensus 87 i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 87 VDLQNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp EECSSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred EEecCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 8776666666 6677889999999999976643
No 278
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.37 E-value=0.00018 Score=61.46 Aligned_cols=97 Identities=21% Similarity=0.257 Sum_probs=57.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-----cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEE
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-----FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAIN 86 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-----~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 86 (274)
..+|+|||||+.|+.+|..|+ .|.+|+++++.+.+... .+ .+........... ..++++... .+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~--~l----~~~~~~~~~~~l~--~~GV~v~~~~~V~~ 251 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK--IL----PEYLSNWTMEKVR--REGVKVMPNAIVQS 251 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT--TS----CHHHHHHHHHHHH--TTTCEEECSCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc--cC----CHHHHHHHHHHHH--hcCCEEEeCCEEEE
Confidence 468999999999999998885 27899999987542110 00 0000000000000 013333322 1122
Q ss_pred E--ecC--eEEeCCCeEEecCEEEEccCCCCCCCh
Q 023975 87 I--TEN--EVLTAEGRRVVYDYLVIATGHKDPVPK 117 (274)
Q Consensus 87 ~--~~~--~v~~~~~~~~~~~~li~a~G~~~~~~~ 117 (274)
+ +.. .+.+.+|.++.+|.+|+|+|..|...-
T Consensus 252 i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l 286 (493)
T 1m6i_A 252 VGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVEL 286 (493)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred EEecCCeEEEEECCCCEEECCEEEECCCCCccHHH
Confidence 2 112 466778889999999999999877643
No 279
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.35 E-value=0.00013 Score=61.99 Aligned_cols=93 Identities=19% Similarity=0.271 Sum_probs=55.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEEE--e
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINI--T 88 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~ 88 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+......+...+...+. ..++++... .+..+ +
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~----------~~Gv~i~~~~~v~~i~~~ 245 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFREDPAIGEAVTAAFR----------AEGIEVLEHTQASQVAHM 245 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTSCHHHHHHHHHHHH----------HTTCEEETTCCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCCCCHHHHHHHHHHHH----------hCCCEEEcCCEEEEEEEe
Confidence 478999999999999999997 599999999987543100000000000000 012233211 11111 1
Q ss_pred cC--eEEeCCCeEEecCEEEEccCCCCCCC
Q 023975 89 EN--EVLTAEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~~--~v~~~~~~~~~~~~li~a~G~~~~~~ 116 (274)
.. .+.++ +.++.+|.+++|+|..|...
T Consensus 246 ~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 246 DGEFVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp TTEEEEEET-TEEEEESEEEECSCEEESCT
T ss_pred CCEEEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 22 34454 55899999999999987654
No 280
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.35 E-value=0.00023 Score=59.30 Aligned_cols=98 Identities=10% Similarity=-0.020 Sum_probs=68.8
Q ss_pred HHccCCchhhhHHHHhhh-hCCCCeEEEEeCCCccCC-----------cCChhHHHHHHHHHHhCCcEEEcCceeeeecc
Q 023975 124 NQYQAGPTGVELAGEIAV-DFPEKKVTLVHKGSRLLE-----------FIGPKAGDKTRDWLISKKVDVKLGERVNLDSV 191 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~-~~~~~~v~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 191 (274)
..+++|..|+.+|..|.+ ...+.+++++.+++.+.. .....+...+.+.+++.|++++.+ +|+.+..
T Consensus 5 vIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i~~ 83 (409)
T 3h8l_A 5 LVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEKIDA 83 (409)
T ss_dssp EEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEEEET
T ss_pred EEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEEEeC
Confidence 346778899999999884 226789999998775311 011233445667777889999987 8888876
Q ss_pred CCCceeEECCCCc----EEeecEEEEcccCCCCchhh
Q 023975 192 SEGSDTYLTSTGD----TINADCHFLCTGKPVGSDWL 224 (274)
Q Consensus 192 ~~~~~~v~~~~g~----~~~~d~vv~a~G~~~~~~~~ 224 (274)
++.. +.+.+++ ++.+|.||+|+|..|..+.+
T Consensus 84 ~~~~--V~~~~g~~~~~~~~~d~lViAtG~~~~~~~i 118 (409)
T 3h8l_A 84 KSSM--VYYTKPDGSMAEEEYDYVIVGIGAHLATELV 118 (409)
T ss_dssp TTTE--EEEECTTSCEEEEECSEEEECCCCEECGGGS
T ss_pred CCCE--EEEccCCcccceeeCCEEEECCCCCcCccCC
Confidence 6554 4444443 49999999999997765433
No 281
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.31 E-value=0.00081 Score=53.86 Aligned_cols=93 Identities=18% Similarity=0.053 Sum_probs=65.2
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCc-----------cCCcC----ChhHHHHHHHHHHhCCcEEEcCceeeee
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSR-----------LLEFI----GPKAGDKTRDWLISKKVDVKLGERVNLD 189 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~-----------~~~~~----~~~~~~~~~~~~~~~gv~i~~~~~v~~i 189 (274)
.+++|..|+..|..+. ..+.+++++.+... ..+.+ ...+.+.+.+.+++.|++++. .++..+
T Consensus 21 IIG~G~aGl~aA~~l~--~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i 97 (319)
T 3cty_A 21 IVGAGAAGFSAAVYAA--RSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVRSI 97 (319)
T ss_dssp EECCSHHHHHHHHHHH--HTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEEEE
T ss_pred EECcCHHHHHHHHHHH--hCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEEEE
Confidence 3455677888888887 45788999987421 01111 124556677778888999988 688888
Q ss_pred ccCCCceeEECCCCcEEeecEEEEcccCCCCc
Q 023975 190 SVSEGSDTYLTSTGDTINADCHFLCTGKPVGS 221 (274)
Q Consensus 190 ~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~~~ 221 (274)
..+++.+.+.+ +++++.+|.+|+|+|..|..
T Consensus 98 ~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 98 KKTQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEeCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 76666556665 56689999999999976543
No 282
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.31 E-value=0.00081 Score=53.58 Aligned_cols=92 Identities=17% Similarity=0.093 Sum_probs=64.9
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEE-EeCCCcc------------CCcCC-----hhHHHHHHHHHHhCCcEEEcCcee
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTL-VHKGSRL------------LEFIG-----PKAGDKTRDWLISKKVDVKLGERV 186 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~-~~~~~~~------------~~~~~-----~~~~~~~~~~~~~~gv~i~~~~~v 186 (274)
.+++|..|+..|..+.+ .+.++++ +.+. .+ .+... ..+...+.+.+++.|++++.+ ++
T Consensus 9 IIG~G~aGl~aA~~l~~--~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 84 (315)
T 3r9u_A 9 IIGGGPAGLSAGLYATR--GGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV-GV 84 (315)
T ss_dssp EECCSHHHHHHHHHHHH--HTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-CE
T ss_pred EECCCHHHHHHHHHHHH--CCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-EE
Confidence 45667888999998884 4677888 7763 21 11222 356677778888899999988 78
Q ss_pred eeeccCC--CceeE-ECCCCcEEeecEEEEcccCCCCch
Q 023975 187 NLDSVSE--GSDTY-LTSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 187 ~~i~~~~--~~~~v-~~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
..+ .++ +.+.+ ...++ ++.+|.+|+|+|..|..+
T Consensus 85 ~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 85 EQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp EEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred EEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 888 555 56664 33444 899999999999866543
No 283
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.27 E-value=0.00052 Score=59.40 Aligned_cols=92 Identities=17% Similarity=0.052 Sum_probs=67.2
Q ss_pred HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC--------C---------------------------c--CChhHH
Q 023975 124 NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------E---------------------------F--IGPKAG 166 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~--------~---------------------------~--~~~~~~ 166 (274)
..+++|.+|+.+|..|. ..+.+++++.+.+.+. | . ..+.+.
T Consensus 13 vIIGaG~aGl~aA~~L~--~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei~ 90 (545)
T 3uox_A 13 VVIGAGVTGIYQAFLIN--QAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEML 90 (545)
T ss_dssp EEECCSHHHHHHHHHHH--HTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHHH
T ss_pred EEECccHHHHHHHHHHH--hCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHHH
Confidence 34566778888898887 4677899999875421 0 0 012345
Q ss_pred HHHHHHHHhCCc--EEEcCceeeeeccCC--CceeEECCCCcEEeecEEEEcccC
Q 023975 167 DKTRDWLISKKV--DVKLGERVNLDSVSE--GSDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 167 ~~~~~~~~~~gv--~i~~~~~v~~i~~~~--~~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
..+.+.+++.++ .+..+++|+++..++ +.+.|.+++|+++.||.||+|+|.
T Consensus 91 ~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 91 RYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred HHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 556666677777 788999999987544 356788899999999999999994
No 284
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.26 E-value=0.00071 Score=54.64 Aligned_cols=95 Identities=21% Similarity=0.201 Sum_probs=66.5
Q ss_pred HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCc-----------cCCcC-----ChhHHHHHHHHHHhCCcEEEcCcee
Q 023975 123 LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSR-----------LLEFI-----GPKAGDKTRDWLISKKVDVKLGERV 186 (274)
Q Consensus 123 ~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~-----------~~~~~-----~~~~~~~~~~~~~~~gv~i~~~~~v 186 (274)
+..+++|..|+..|..+. ..+.+++++.+... ..+.+ ...+...+.+.+++.|++++.++ +
T Consensus 17 vvIIG~G~aGl~aA~~l~--~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v 93 (335)
T 2a87_A 17 VIVIGSGPAGYTAALYAA--RAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED-V 93 (335)
T ss_dssp EEEECCHHHHHHHHHHHH--HTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred EEEECCCHHHHHHHHHHH--hCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-E
Confidence 334556777888888887 34778888875310 01111 13456667777888999999987 8
Q ss_pred eeeccCCCceeE-ECCCCcEEeecEEEEcccCCCCc
Q 023975 187 NLDSVSEGSDTY-LTSTGDTINADCHFLCTGKPVGS 221 (274)
Q Consensus 187 ~~i~~~~~~~~v-~~~~g~~~~~d~vv~a~G~~~~~ 221 (274)
..+.. .+.+.+ .+.+|+++.+|.+|+|+|..|..
T Consensus 94 ~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 94 ESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp EEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 88876 445667 77788899999999999986643
No 285
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.26 E-value=0.00071 Score=59.20 Aligned_cols=101 Identities=14% Similarity=0.077 Sum_probs=72.6
Q ss_pred HHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC-----------cC-C--hhHHHHHHHHHHhCCcEEEcCceee
Q 023975 122 RLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-----------FI-G--PKAGDKTRDWLISKKVDVKLGERVN 187 (274)
Q Consensus 122 ~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~-----------~~-~--~~~~~~~~~~~~~~gv~i~~~~~v~ 187 (274)
++..+++|..|+..|..|.+..++.+++++.+.+.+.- .. . ..+...+....++.|++++.+++|+
T Consensus 38 ~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~~V~ 117 (588)
T 3ics_A 38 KIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVV 117 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSEEEE
T ss_pred CEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECCEEE
Confidence 35556778889999999986666889999998876310 00 0 1122334455667899999999999
Q ss_pred eeccCCCceeEEC-CCCc--EEeecEEEEcccCCCCch
Q 023975 188 LDSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGSD 222 (274)
Q Consensus 188 ~i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~~ 222 (274)
.+..+++.+.+.. .+|+ ++.+|.+|+|||..|..+
T Consensus 118 ~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 118 KINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9987777666653 4565 789999999999876543
No 286
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.25 E-value=0.00017 Score=60.63 Aligned_cols=95 Identities=16% Similarity=0.091 Sum_probs=66.5
Q ss_pred HccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCc-----------CChhHHHHHHHHHHhCCcEEEcCceeeeeccCC
Q 023975 125 QYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEF-----------IGPKAGDKTRDWLISKKVDVKLGERVNLDSVSE 193 (274)
Q Consensus 125 ~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~ 193 (274)
.+++|..|+..|..|.+...+.+++++.+.+.+... ....+...+.+.+++.|++++.+ +++.+..+.
T Consensus 7 IIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~id~~~ 85 (430)
T 3h28_A 7 VIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESIDPDA 85 (430)
T ss_dssp EECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEEETTT
T ss_pred EECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEEECCC
Confidence 456788899999999853367899999988754210 00111122334556689999864 788887554
Q ss_pred CceeEECCCCcEEeecEEEEcccCCCCch
Q 023975 194 GSDTYLTSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 194 ~~~~v~~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
. .+.+++++++.+|.+|+|+|..++.+
T Consensus 86 ~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 86 N--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp T--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred C--EEEECCCcEEECCEEEEcCCcccccC
Confidence 3 67778888899999999999876543
No 287
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.22 E-value=0.00014 Score=62.14 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=29.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 468999999999999999997 599999999853
No 288
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.21 E-value=0.0011 Score=56.39 Aligned_cols=99 Identities=19% Similarity=0.228 Sum_probs=61.6
Q ss_pred HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC------Cc-CC------hhH------HHHHHHHH-HhCCcEEEc
Q 023975 123 LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL------EF-IG------PKA------GDKTRDWL-ISKKVDVKL 182 (274)
Q Consensus 123 ~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~------~~-~~------~~~------~~~~~~~~-~~~gv~i~~ 182 (274)
+..+++|..|+.+|..|.+..++.+++++.+.+.+. +. .. ..+ .....+.+ ++.|++++.
T Consensus 6 VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~ 85 (472)
T 3iwa_A 6 VVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVEALV 85 (472)
T ss_dssp EEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CEEEC
T ss_pred EEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcEEEE
Confidence 345677889999999998766689999999887631 11 00 011 11112223 357999999
Q ss_pred CceeeeeccCCCceeEEC-CCCc--EEeecEEEEcccCCCCc
Q 023975 183 GERVNLDSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGS 221 (274)
Q Consensus 183 ~~~v~~i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~ 221 (274)
+++|+.+..+.+.+.+.. .+|+ ++.+|.+|+|||..|..
T Consensus 86 ~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~ 127 (472)
T 3iwa_A 86 ETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANR 127 (472)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred CCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCC
Confidence 999999987776666553 3455 79999999999987654
No 289
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.19 E-value=0.00017 Score=61.62 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=29.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 468999999999999999997 599999999864
No 290
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.12 E-value=0.0008 Score=55.81 Aligned_cols=99 Identities=16% Similarity=0.065 Sum_probs=66.7
Q ss_pred HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCCcC----------ChhHHHHHHHHHHhCCcEEEcCceeeeeccC
Q 023975 123 LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFI----------GPKAGDKTRDWLISKKVDVKLGERVNLDSVS 192 (274)
Q Consensus 123 ~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 192 (274)
+-.+++|..|+.+|..|.+..++.+|+++.+++...... .......-.+.+.+.|++++.+ +|+.|..+
T Consensus 5 VvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~id~~ 83 (401)
T 3vrd_B 5 VVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGIDPD 83 (401)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEEETT
T ss_pred EEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEEEcc
Confidence 334667888999998887656678999998876532110 0000000124456689999865 57777544
Q ss_pred CCceeEECCCCcEEeecEEEEcccCCCCchhh
Q 023975 193 EGSDTYLTSTGDTINADCHFLCTGKPVGSDWL 224 (274)
Q Consensus 193 ~~~~~v~~~~g~~~~~d~vv~a~G~~~~~~~~ 224 (274)
...+.+.+|+++.+|.+|+|+|..++.+-+
T Consensus 84 --~~~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 84 --KKLVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp --TTEEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred --CcEEEecccceeecceeeeccCCccccCCc
Confidence 446778899999999999999987765433
No 291
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.07 E-value=0.00075 Score=58.08 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=28.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK 44 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~ 44 (274)
..+++|||+|+.|+.+|..|+ .|.+|+++++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 457999999999999999997 59999999985
No 292
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.07 E-value=0.00047 Score=60.46 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=29.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK 44 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~ 44 (274)
..+++|||||..|+-+|..|+ .|.+|+++++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 468999999999999999997 49999999987
No 293
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.06 E-value=0.0016 Score=55.44 Aligned_cols=100 Identities=15% Similarity=0.029 Sum_probs=68.1
Q ss_pred HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC-cC------------ChhHHHHHHHHH-HhCCcEEEcCceeee
Q 023975 123 LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE-FI------------GPKAGDKTRDWL-ISKKVDVKLGERVNL 188 (274)
Q Consensus 123 ~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~-~~------------~~~~~~~~~~~~-~~~gv~i~~~~~v~~ 188 (274)
+..+++|..|+.+|..+.+..++.+++++.+.+.... .. ...+.....+.+ ++.|++++.++.+..
T Consensus 39 vvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v~~ 118 (480)
T 3cgb_A 39 YVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVTK 118 (480)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEEEE
T ss_pred EEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEEEE
Confidence 4456667888888988875446889999998765310 00 011111223445 445999999999999
Q ss_pred eccCCCceeEEC-CCCc--EEeecEEEEcccCCCCch
Q 023975 189 DSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGSD 222 (274)
Q Consensus 189 i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~~ 222 (274)
+..+++.+.+.. .+|+ ++.+|.+|+|||..|..+
T Consensus 119 i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 119 VDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 987666666654 4566 799999999999876543
No 294
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.06 E-value=0.00083 Score=46.88 Aligned_cols=36 Identities=19% Similarity=0.332 Sum_probs=31.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
....+|+|+|+|..|...|..|. .|++|+++|+++.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34578999999999999999997 5999999999754
No 295
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.04 E-value=0.003 Score=55.36 Aligned_cols=55 Identities=16% Similarity=0.062 Sum_probs=43.1
Q ss_pred HHHHHHHHHHh-CCcEEEcCceeeeeccCCCce-eEECCCCcEEeecEEEEcccCCCC
Q 023975 165 AGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 165 ~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~~ 220 (274)
+...+.+.+++ .|+++. +++|+++..+++.+ .|.+.+|.++.||.||+|+|..+.
T Consensus 126 ~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 126 YRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred HHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 45566777777 699994 67899997666654 678888888999999999997654
No 296
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.93 E-value=0.00092 Score=56.60 Aligned_cols=54 Identities=13% Similarity=-0.000 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCcEEEcCceeeeeccC---CCc--eeEECCCCc----EEeecEEEEcccCCCC
Q 023975 167 DKTRDWLISKKVDVKLGERVNLDSVS---EGS--DTYLTSTGD----TINADCHFLCTGKPVG 220 (274)
Q Consensus 167 ~~~~~~~~~~gv~i~~~~~v~~i~~~---~~~--~~v~~~~g~----~~~~d~vv~a~G~~~~ 220 (274)
+.+....++.+++++++++|++++.+ ++. +.|.+.+|+ ++.+|.||+|||..|.
T Consensus 131 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 131 DYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp HHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEEC
T ss_pred HHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCC
Confidence 33444455678999999999999765 222 366666665 8999999999998665
No 297
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.91 E-value=0.0012 Score=58.97 Aligned_cols=96 Identities=17% Similarity=0.118 Sum_probs=58.2
Q ss_pred CCcEEEEc--CChHHHHHHHHhh-cCCcEEEEcCCCCceeeccceeeecCCccccceeeeccccccccEEEEE-eeEEEe
Q 023975 13 NKRVVVIG--GGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLRAMVEPSFGKRSVINHTDYLVNGRIVAS-PAINIT 88 (274)
Q Consensus 13 ~~~v~IIG--aG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 88 (274)
..+|+||| +|..|+.+|..|+ .|.+|+++++.+.+...... ... ...+.... ...+++++.. .+..+.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~------~~~-~~~l~~~l-~~~GV~i~~~~~V~~i~ 594 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNN------TFE-VNRIQRRL-IENGVARVTDHAVVAVG 594 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGG------GTC-HHHHHHHH-HHTTCEEEESEEEEEEE
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccccc------chh-HHHHHHHH-HHCCCEEEcCcEEEEEE
Confidence 35799999 9999999999997 59999999988765421100 000 00000000 0124555443 233444
Q ss_pred cCeEEe-----CCCeEEecCEEEEccCCCCCCC
Q 023975 89 ENEVLT-----AEGRRVVYDYLVIATGHKDPVP 116 (274)
Q Consensus 89 ~~~v~~-----~~~~~~~~~~li~a~G~~~~~~ 116 (274)
...+.. .++.++.+|.+|+|+|..|...
T Consensus 595 ~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~ 627 (690)
T 3k30_A 595 AGGVTVRDTYASIERELECDAVVMVTARLPREE 627 (690)
T ss_dssp TTEEEEEETTTCCEEEEECSEEEEESCEEECCH
T ss_pred CCeEEEEEccCCeEEEEECCEEEECCCCCCChH
Confidence 442222 2456789999999999987654
No 298
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.83 E-value=0.0018 Score=54.71 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=30.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYF 47 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~~ 47 (274)
..++|+|||||..|+-+|..+. .|. +|+++++.+..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3579999999999999998876 477 59999998754
No 299
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.81 E-value=0.0066 Score=53.04 Aligned_cols=56 Identities=14% Similarity=0.053 Sum_probs=43.7
Q ss_pred HHHHHHHHHHh-CCcEEEcCceeeeeccCCCce-eEECCCCcEEeecEEEEcccCCCCc
Q 023975 165 AGDKTRDWLIS-KKVDVKLGERVNLDSVSEGSD-TYLTSTGDTINADCHFLCTGKPVGS 221 (274)
Q Consensus 165 ~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~d~vv~a~G~~~~~ 221 (274)
+...+.+.+++ .|+++. +.+|+++..+++.+ .|.+.+|+++.||.||+|||..++.
T Consensus 125 ~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 125 YREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp HHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred HHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 45566677777 599995 67899987666654 5888889899999999999976543
No 300
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.81 E-value=0.0049 Score=53.30 Aligned_cols=93 Identities=15% Similarity=0.083 Sum_probs=63.5
Q ss_pred HHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC--------Cc-------------CC----------------hhHH
Q 023975 124 NQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------EF-------------IG----------------PKAG 166 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~--------~~-------------~~----------------~~~~ 166 (274)
..+++|.+|+.+|..|.+ .+.++.++.+.+.+. +. +. +.+.
T Consensus 20 vIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i~ 97 (542)
T 1w4x_A 20 LVVGAGFSGLYALYRLRE--LGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEIL 97 (542)
T ss_dssp EEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHHH
T ss_pred EEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHHH
Confidence 344556778888888873 477888888765320 10 01 1233
Q ss_pred HHHHHHHHhCC--cEEEcCceeeeeccCCC--ceeEECCCCcEEeecEEEEcccCC
Q 023975 167 DKTRDWLISKK--VDVKLGERVNLDSVSEG--SDTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 167 ~~~~~~~~~~g--v~i~~~~~v~~i~~~~~--~~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
+.+...+++.+ ..+..+++|.+++.+++ .+.|.+++|+++.||.||+|+|..
T Consensus 98 ~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 98 RYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 34444455555 67899999999876543 567888889899999999999964
No 301
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.78 E-value=0.0011 Score=46.22 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+.+|+|+|+|..|...|..|. .|++|+++|+++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 468999999999999999997 5999999998653
No 302
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.74 E-value=0.0014 Score=46.52 Aligned_cols=34 Identities=35% Similarity=0.577 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|+|+|+|..|..+|..|+ .|++|+++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 468999999999999999997 5999999998753
No 303
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.58 E-value=0.0019 Score=43.27 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=29.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g-~~v~vie~~~ 45 (274)
+++|+|+|+|..|..++..|. .| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999998886 58 8999999864
No 304
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.56 E-value=0.0033 Score=53.71 Aligned_cols=97 Identities=16% Similarity=0.032 Sum_probs=65.4
Q ss_pred HHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC----------cCCh---hHHHHHHHHHHhCCcEEEcCceeee
Q 023975 122 RLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE----------FIGP---KAGDKTRDWLISKKVDVKLGERVNL 188 (274)
Q Consensus 122 ~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~gv~i~~~~~v~~ 188 (274)
.+..+++|..|+..|..+.+ . .+++++.+.+.+.. .+.. .+...+.+.+ +.|++++.++.+.+
T Consensus 110 dVvIIGgG~aGl~aA~~L~~--~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~ 185 (493)
T 1y56_A 110 DVAIIGGGPAGIGAALELQQ--Y-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALG 185 (493)
T ss_dssp SCCEECCSHHHHHHHHHHTT--T-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECC
T ss_pred CEEEECccHHHHHHHHHHHh--c-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEE
Confidence 35566778999999999984 3 88999998765411 0111 1222223333 56999999999988
Q ss_pred eccCCCceeEEC-CCCc--EEeecEEEEcccCCCCch
Q 023975 189 DSVSEGSDTYLT-STGD--TINADCHFLCTGKPVGSD 222 (274)
Q Consensus 189 i~~~~~~~~v~~-~~g~--~~~~d~vv~a~G~~~~~~ 222 (274)
+..+++.+.+.. ++++ ++.+|.+|+|||..|...
T Consensus 186 i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 186 VFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp CEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred EEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 876665554433 4454 689999999999876543
No 305
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.52 E-value=0.0024 Score=44.20 Aligned_cols=32 Identities=34% Similarity=0.472 Sum_probs=28.9
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++|+|||+|..|...|..|. .|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 58999999999999999997 599999999864
No 306
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=96.40 E-value=0.0016 Score=54.66 Aligned_cols=44 Identities=18% Similarity=0.352 Sum_probs=38.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecccee
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWASLR 55 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~~~ 55 (274)
..+||+|||||++|+++|..|+ +|++|+|+|+++.+|+.+....
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~ 49 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSIT 49 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccc
Confidence 4589999999999999999998 5999999999999987655443
No 307
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.40 E-value=0.0041 Score=43.95 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=29.1
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.+++|+|+|..|...|..|. .|++|+++|+.+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 68999999999999999997 599999999863
No 308
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.39 E-value=0.012 Score=47.56 Aligned_cols=95 Identities=18% Similarity=0.083 Sum_probs=61.1
Q ss_pred ccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC--------------------------------------cCChhHHH
Q 023975 126 YQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE--------------------------------------FIGPKAGD 167 (274)
Q Consensus 126 ~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~--------------------------------------~~~~~~~~ 167 (274)
+++|..|+..|..+.+..++.++.++.+.+.+.. .....+.+
T Consensus 85 VGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~~d~~~ 164 (344)
T 3jsk_A 85 VGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHAALFTS 164 (344)
T ss_dssp ECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHH
T ss_pred ECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEecHHHHHH
Confidence 3446778888888875335778888887653210 00122345
Q ss_pred HHHHHHHh-CCcEEEcCceeeeeccCC-----------------C--ce-eEEC------C--------CCcEEeecEEE
Q 023975 168 KTRDWLIS-KKVDVKLGERVNLDSVSE-----------------G--SD-TYLT------S--------TGDTINADCHF 212 (274)
Q Consensus 168 ~~~~~~~~-~gv~i~~~~~v~~i~~~~-----------------~--~~-~v~~------~--------~g~~~~~d~vv 212 (274)
.+.+.+.+ .|++++.++.+.++..++ + .+ .++. . +..++.|+.||
T Consensus 165 ~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV 244 (344)
T 3jsk_A 165 TVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVII 244 (344)
T ss_dssp HHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEE
T ss_pred HHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEE
Confidence 56666766 599999999999887654 1 11 2222 1 23479999999
Q ss_pred EcccCCCC
Q 023975 213 LCTGKPVG 220 (274)
Q Consensus 213 ~a~G~~~~ 220 (274)
.|||....
T Consensus 245 ~ATG~~s~ 252 (344)
T 3jsk_A 245 STTGHDGP 252 (344)
T ss_dssp ECCCSSSS
T ss_pred ECCCCCch
Confidence 99997543
No 309
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.33 E-value=0.013 Score=50.11 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=29.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhh---cCCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ---FSADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~---~g~~v~vie~~~~ 46 (274)
..++|+|||+|-+|.-++..|+ .+.+|+++-|.+.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 3578999999999999998885 3789999998764
No 310
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.29 E-value=0.0021 Score=59.51 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=31.2
Q ss_pred CcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCce
Q 023975 14 KRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFE 48 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g 48 (274)
.+|+|||+|+.|+.+|..|++ |.+|+|+|+.+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 689999999999999999974 99999999987653
No 311
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.22 E-value=0.0065 Score=51.97 Aligned_cols=98 Identities=10% Similarity=0.037 Sum_probs=63.0
Q ss_pred HHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC--C--------cCCh-hHHHHHHHHH--HhCCcEEEcCceeee
Q 023975 122 RLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--E--------FIGP-KAGDKTRDWL--ISKKVDVKLGERVNL 188 (274)
Q Consensus 122 ~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~--~--------~~~~-~~~~~~~~~~--~~~gv~i~~~~~v~~ 188 (274)
++-.+++|+.|+.+|..|. ..+.+|+++.+++.++ | ..++ .+...+.+.+ ++.+++++. .++++
T Consensus 44 rVVIIGgG~AGl~~A~~L~--~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~-~~v~~ 120 (502)
T 4g6h_A 44 NVLILGSGWGAISFLKHID--TKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYE-AEATS 120 (502)
T ss_dssp EEEEECSSHHHHHHHHHSC--TTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEE-EEEEE
T ss_pred CEEEECCcHHHHHHHHHhh--hCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEE-EEEEE
Confidence 4666777888999999887 5678999999886531 1 0111 1111233333 234677765 36777
Q ss_pred eccCCCceeEE------------------CCCCcEEeecEEEEcccCCCCch
Q 023975 189 DSVSEGSDTYL------------------TSTGDTINADCHFLCTGKPVGSD 222 (274)
Q Consensus 189 i~~~~~~~~v~------------------~~~g~~~~~d~vv~a~G~~~~~~ 222 (274)
|..+...+.+. ..++.++.+|.+|+|||..|+..
T Consensus 121 ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 121 INPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred EEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 76555544432 24567899999999999887643
No 312
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.21 E-value=0.0046 Score=52.14 Aligned_cols=34 Identities=38% Similarity=0.475 Sum_probs=30.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..++|+|||.|.+|+++|..|+ +|++|++.|+.+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3579999999999999999887 699999999865
No 313
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.15 E-value=0.0057 Score=48.60 Aligned_cols=35 Identities=37% Similarity=0.500 Sum_probs=30.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.+++|.|||+|.-|...|..|. .|++|+++|+++.
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3468999999999999998886 5999999998753
No 314
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.15 E-value=0.0046 Score=42.94 Aligned_cols=33 Identities=36% Similarity=0.523 Sum_probs=29.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
+.+|+|+|+|..|...|..|. .|++|+++|+.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357999999999999999997 599999999864
No 315
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=96.14 E-value=0.0063 Score=51.36 Aligned_cols=42 Identities=24% Similarity=0.330 Sum_probs=37.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS 53 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~ 53 (274)
..+||+|||||++||++|..|+ .|++|+|+|+++.+|+....
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 3589999999999999999998 49999999999999977554
No 316
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.14 E-value=0.0073 Score=45.54 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=30.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..++|+|||||..|...|..|. .|++|+|+++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4579999999999999998886 599999999753
No 317
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.07 E-value=0.0078 Score=48.51 Aligned_cols=37 Identities=27% Similarity=0.335 Sum_probs=31.2
Q ss_pred CCCCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023975 10 EGKNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (274)
Q Consensus 10 ~~~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~ 46 (274)
.++..+|+|||+|..|.+.|..|+ .|+ +|+++|..+.
T Consensus 6 ~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 6 VQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 334468999999999999999997 587 9999998764
No 318
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.06 E-value=0.0083 Score=43.77 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c-CCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F-SADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~-g~~v~vie~~~~ 46 (274)
..+|+|+|+|..|...|..|. . |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 458999999999999999996 6 999999998753
No 319
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.98 E-value=0.0066 Score=48.71 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=29.3
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++|+|||+|..|.+.|..|+ .|++|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 58999999999999999997 499999999975
No 320
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.97 E-value=0.0047 Score=51.92 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|+|||.|.+|+++|..|+ +|++|+++|....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 468999999999999998886 5999999998664
No 321
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.89 E-value=0.0099 Score=48.39 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=30.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+.++|.|||+|.-|.+.|..|+ .|++|+++++++.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3468999999999999999997 4999999998753
No 322
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.88 E-value=0.0085 Score=49.91 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHhhcCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~g~~v~vie~~~~ 46 (274)
.++|.|||+|..|+..|..|++|++|+++|+++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQNHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHcCCeEEEEecCHH
Confidence 3689999999999999998877999999998754
No 323
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.82 E-value=0.0089 Score=49.19 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|+|||+|.+|+.+|..|+ .|++|+++|+...
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 468999999999999999887 5999999998764
No 324
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.82 E-value=0.0017 Score=58.30 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=30.0
Q ss_pred CCcEEEEc--CChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIG--GGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIG--aG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+|+||| ||..|+-+|..|+ .|.+|+++++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 46899999 9999999999997 599999999987
No 325
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.80 E-value=0.0072 Score=48.28 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=28.5
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++|+|||+|..|.+.|..|+ .|++|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 58999999999999999997 599999999975
No 326
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.79 E-value=0.0066 Score=47.27 Aligned_cols=34 Identities=35% Similarity=0.583 Sum_probs=29.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+.|+|||||..|...|..|. .|++|+|+++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4579999999999999999887 599999999754
No 327
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=95.75 E-value=0.0087 Score=50.73 Aligned_cols=42 Identities=24% Similarity=0.399 Sum_probs=35.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCCceeeccc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEYFEITWAS 53 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~~g~~~~~ 53 (274)
..+||+|||||++|+++|+.|+ .|+ +|+|+|+++.+|+.+..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 3579999999999999999997 498 89999999998866543
No 328
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.68 E-value=0.0079 Score=45.29 Aligned_cols=32 Identities=25% Similarity=0.449 Sum_probs=29.0
Q ss_pred cEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+|+|+|+|..|...|..|. .|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 6999999999999999997 5999999998754
No 329
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.67 E-value=0.01 Score=48.41 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|+|||+|..|+.+|..|+ .|.+|+++|++..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 469999999999999999987 4999999998753
No 330
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.63 E-value=0.012 Score=46.59 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=30.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 468999999999999999997 5999999998765
No 331
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.62 E-value=0.013 Score=46.06 Aligned_cols=34 Identities=32% Similarity=0.308 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||+|.-|...|..|+ .|++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 368999999999999999887 5999999998764
No 332
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.57 E-value=0.013 Score=46.83 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=30.9
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.+++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4578999999999999999997 5999999998764
No 333
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.50 E-value=0.01 Score=46.93 Aligned_cols=32 Identities=34% Similarity=0.452 Sum_probs=29.0
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++|+|||+|.-|.+.|..|+ .|++|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 58999999999999999997 499999999874
No 334
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.49 E-value=0.009 Score=50.52 Aligned_cols=88 Identities=11% Similarity=-0.025 Sum_probs=61.0
Q ss_pred HHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccC--------CcC--ChhHHHHHHHHHHhCCcEEEcCceeeeeccC
Q 023975 123 LNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLL--------EFI--GPKAGDKTRDWLISKKVDVKLGERVNLDSVS 192 (274)
Q Consensus 123 ~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~ 192 (274)
+..+++|..|+.+|..+....++.+++++.+.+.+. +.. ...+...+.+.+++.|++++.++.+.
T Consensus 9 vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~----- 83 (460)
T 1cjc_A 9 ICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG----- 83 (460)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-----
T ss_pred EEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-----
Confidence 344667888999999988543448999999887653 211 12455667777888999999987652
Q ss_pred CCceeEECCCCcEEeecEEEEcccCCC
Q 023975 193 EGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 193 ~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
. .+.+++. .+.+|.||+|||..+
T Consensus 84 -~--~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 -R--DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp -T--TBCHHHH-HHHSSEEEECCCCCE
T ss_pred -e--EEEeccc-eEEcCEEEEecCcCC
Confidence 1 1223332 478999999999874
No 335
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.47 E-value=0.011 Score=47.16 Aligned_cols=33 Identities=24% Similarity=0.287 Sum_probs=29.5
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.+|+|||+|.-|...|..++ .|++|+++|..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 68999999999999998876 6999999998754
No 336
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.46 E-value=0.0079 Score=50.83 Aligned_cols=33 Identities=24% Similarity=0.547 Sum_probs=30.1
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++|+|+|+|-.|...|..|. .|++|+++|+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 58999999999999999997 5999999998764
No 337
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.46 E-value=0.018 Score=46.14 Aligned_cols=34 Identities=32% Similarity=0.429 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~ 46 (274)
..+|+|||+|..|.+.|..|. .|+ +|+++|+.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 468999999999999999887 588 9999998754
No 338
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.43 E-value=0.0077 Score=48.23 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=30.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCC
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKE 45 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~-~g-~~v~vie~~~ 45 (274)
.++++|.|||.|..|...|..|. .| ++|+++++++
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred ccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 34578999999999999999997 49 9999999875
No 339
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.30 E-value=0.021 Score=45.65 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~~ 46 (274)
.++|.|||.|..|.+.|..|+ .|+ +|+++++++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 368999999999999999987 588 9999998753
No 340
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.28 E-value=0.019 Score=45.73 Aligned_cols=32 Identities=34% Similarity=0.582 Sum_probs=29.0
Q ss_pred CcEEEEcCChHHHHHHHHhhcCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~~g~~v~vie~~~ 45 (274)
++|+|||+|..|.+.|..|+.|++|++++|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 58999999999999998887889999999875
No 341
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.23 E-value=0.02 Score=45.99 Aligned_cols=34 Identities=26% Similarity=0.188 Sum_probs=28.9
Q ss_pred CCcEEEEcCChHHHH-HHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSL-VAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~-~A~~L~-~g~~v~vie~~~~ 46 (274)
+++|.|||.|.+|++ +|..|+ +|++|++.|+.+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 468999999999997 677775 6999999998754
No 342
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.23 E-value=0.017 Score=45.98 Aligned_cols=32 Identities=34% Similarity=0.465 Sum_probs=28.9
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++|.|||+|..|...|..|. .|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 58999999999999999997 599999999864
No 343
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.22 E-value=0.021 Score=42.61 Aligned_cols=34 Identities=18% Similarity=0.394 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||+|..|.+.|..|. .|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 468999999999999999997 5999999998764
No 344
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.22 E-value=0.014 Score=40.74 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=29.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+|+|||+|..|...|..|. .|++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 478999999999999999887 588999999864
No 345
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.20 E-value=0.0061 Score=51.50 Aligned_cols=86 Identities=8% Similarity=-0.070 Sum_probs=59.7
Q ss_pred HHccCCchhhhHHHHhhh-hCC----CCeEEEEeCCCccCC--------c--CChhHHHHHHHHHHhCCcEEEcCceeee
Q 023975 124 NQYQAGPTGVELAGEIAV-DFP----EKKVTLVHKGSRLLE--------F--IGPKAGDKTRDWLISKKVDVKLGERVNL 188 (274)
Q Consensus 124 ~~~~~g~~~~e~a~~l~~-~~~----~~~v~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~gv~i~~~~~v~~ 188 (274)
..+++|..|+..|..+.. ..+ +.+++++.+.+.+.. . ....+...+.+.+++.|++++.+..+
T Consensus 7 vIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v~v-- 84 (456)
T 1lqt_A 7 AIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVV-- 84 (456)
T ss_dssp EEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESCCB--
T ss_pred EEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeEEE--
Confidence 345678889999988875 333 789999998865431 1 12246667777788889999987543
Q ss_pred eccCCCceeEECCCCcEEeecEEEEcccCC
Q 023975 189 DSVSEGSDTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 189 i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
+. .+.++++ ++.+|.||+|||..
T Consensus 85 ----~~--~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 85 ----GE--HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp ----TT--TBCHHHH-HHHSSEEEECCCCC
T ss_pred ----CC--EEEECCC-eEeCCEEEEeeCCC
Confidence 11 2334444 47899999999986
No 346
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.19 E-value=0.019 Score=46.89 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (274)
|++|+|+|||..|..+|+.+++ |++|+++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4789999999999999999985 999999997654
No 347
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.15 E-value=0.027 Score=45.13 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=29.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~ 46 (274)
+.+|+|||+|..|.++|..|+ +|+ +|+++|.++.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 368999999999999998887 577 8999998654
No 348
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.13 E-value=0.019 Score=48.29 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.3
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++|.|||+|..|+..|..|+ .|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 58999999999999999997 599999999875
No 349
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.12 E-value=0.021 Score=44.82 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=28.8
Q ss_pred cEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+|.|||+|..|...|..|. .|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 6999999999999999997 5999999998764
No 350
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.08 E-value=0.021 Score=45.69 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=29.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
+++|+|||+|..|.+.|..|. .|+ +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 358999999999999999987 588 999999874
No 351
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.05 E-value=0.021 Score=47.28 Aligned_cols=34 Identities=32% Similarity=0.430 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|+|||+|.+|+.+|..++ .|.+|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 468999999999999999887 5999999998754
No 352
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.02 E-value=0.029 Score=44.77 Aligned_cols=32 Identities=41% Similarity=0.522 Sum_probs=29.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPK 44 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~ 44 (274)
..+|.|||+|..|.++|..|. .|+ +++++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 468999999999999999986 588 99999987
No 353
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.01 E-value=0.029 Score=45.08 Aligned_cols=33 Identities=36% Similarity=0.444 Sum_probs=29.3
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~ 46 (274)
.+|+|||+|..|.+.|..|+ .|+ +|+++|.++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 58999999999999998887 587 9999998764
No 354
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.01 E-value=0.025 Score=46.54 Aligned_cols=34 Identities=32% Similarity=0.380 Sum_probs=30.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|+|||+|.+|+.+|..++ .|.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 479999999999999999887 5999999998753
No 355
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.94 E-value=0.027 Score=45.43 Aligned_cols=31 Identities=16% Similarity=0.476 Sum_probs=28.5
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK 44 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~ 44 (274)
++|+|||+|..|.+.|..|+ .|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999997 59999999985
No 356
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.92 E-value=0.023 Score=46.45 Aligned_cols=31 Identities=29% Similarity=0.421 Sum_probs=28.3
Q ss_pred cEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
+|.|||+|..|.+.|..|. .|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 8999999999999999997 499999999874
No 357
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.91 E-value=0.026 Score=45.18 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=29.8
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|.|||+|.-|.+.|..|. .|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 368999999999999998887 5999999998764
No 358
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.87 E-value=0.031 Score=44.74 Aligned_cols=34 Identities=26% Similarity=0.467 Sum_probs=28.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
++.+|+|||+|..|.+.|..|. .+. +++++|..+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3469999999999999999887 465 899999764
No 359
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.84 E-value=0.025 Score=47.94 Aligned_cols=33 Identities=24% Similarity=0.452 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.++|.|||+|..|+..|..|+ .|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999997 599999999864
No 360
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.83 E-value=0.033 Score=44.34 Aligned_cols=32 Identities=38% Similarity=0.566 Sum_probs=28.1
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
++|+|||+|..|...|..|. .|+ +++++|..+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 58999999999999999886 575 899999765
No 361
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.80 E-value=0.026 Score=45.04 Aligned_cols=33 Identities=30% Similarity=0.359 Sum_probs=29.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
+++|.|||.|..|...|..|. .|+ +|+++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 578999999999999999997 499 999999963
No 362
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.77 E-value=0.035 Score=44.28 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|.|||+|..|...|..|. .|++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 368999999999999998886 5999999998754
No 363
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.72 E-value=0.03 Score=45.71 Aligned_cols=37 Identities=30% Similarity=0.461 Sum_probs=29.6
Q ss_pred CCCCCCcEEEEcCChHHHHHHHHhhcCCcEEEEcCCC
Q 023975 9 SEGKNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (274)
Q Consensus 9 ~~~~~~~v~IIGaG~aGl~~A~~L~~g~~v~vie~~~ 45 (274)
|..++++|+|+|||..|-.+|..|++.++|++.++..
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~ 48 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNN 48 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCH
Confidence 3344578999999999999999999888999988754
No 364
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.70 E-value=0.037 Score=44.38 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=29.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
...+|+|||+|..|.++|..|. .|+ +++++|..+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 3568999999999999999886 465 899999864
No 365
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.66 E-value=0.031 Score=45.41 Aligned_cols=32 Identities=28% Similarity=0.248 Sum_probs=28.9
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++|.|||+|..|...|..|+ .|++|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 58999999999999999987 599999999864
No 366
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.65 E-value=0.032 Score=45.54 Aligned_cols=33 Identities=36% Similarity=0.510 Sum_probs=29.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
..+|+|+|||.+|+.+|..|. .|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 469999999999999998886 488 999999874
No 367
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.60 E-value=0.044 Score=46.05 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||+|.-|...|..|+ .|++|+++|+++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 468999999999999998887 5999999999865
No 368
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.60 E-value=0.041 Score=43.20 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=29.8
Q ss_pred CCCcEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGa-G~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++++|.|||+ |..|...|..|. .|++|+++++++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3468999999 999999999986 599999999865
No 369
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.57 E-value=0.025 Score=45.12 Aligned_cols=32 Identities=22% Similarity=0.298 Sum_probs=28.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-c-----C-CcEEEEcC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-F-----S-ADVTLIDP 43 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~-----g-~~v~vie~ 43 (274)
++++|.|||+|..|...|..|. . | ++|+++++
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3358999999999999998886 5 8 99999998
No 370
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.56 E-value=0.029 Score=44.12 Aligned_cols=33 Identities=24% Similarity=0.275 Sum_probs=29.6
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 57999999999999999987 5999999998764
No 371
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.55 E-value=0.036 Score=44.18 Aligned_cols=32 Identities=31% Similarity=0.445 Sum_probs=28.3
Q ss_pred cEEEEcCChHHHHHHHHhhc---CCcEEEEcCCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQF---SADVTLIDPKEY 46 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~~---g~~v~vie~~~~ 46 (274)
+|+|||+|..|.+.|..|+. +++|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 79999999999999988863 789999999764
No 372
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=94.53 E-value=0.038 Score=46.76 Aligned_cols=41 Identities=27% Similarity=0.434 Sum_probs=35.0
Q ss_pred CCCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeec
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITW 51 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~ 51 (274)
...+||+|||||++||++|+.|++ |++|+|+|+++.+|+..
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 446899999999999999999985 99999999999988554
No 373
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.52 E-value=0.053 Score=48.14 Aligned_cols=84 Identities=24% Similarity=0.194 Sum_probs=59.4
Q ss_pred HHHHccCCchhhhHHHHhhhhCCCCeEEEEeCCCccCC---------cCC--hhHHHHHHHHHHhCCcEEEcCceeeeec
Q 023975 122 RLNQYQAGPTGVELAGEIAVDFPEKKVTLVHKGSRLLE---------FIG--PKAGDKTRDWLISKKVDVKLGERVNLDS 190 (274)
Q Consensus 122 ~~~~~~~g~~~~e~a~~l~~~~~~~~v~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 190 (274)
++..+++|..|+..|..+. ..+.+++++.+.+.+.. ... ..+...+.+.+++.|++++.++.+...
T Consensus 375 ~vvIIGgG~AGl~aA~~l~--~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~- 451 (671)
T 1ps9_A 375 NLAVVGAGPAGLAFAINAA--ARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTAD- 451 (671)
T ss_dssp EEEEECCSHHHHHHHHHHH--TTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCSS-
T ss_pred eEEEECCCHHHHHHHHHHH--hCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecHH-
Confidence 4566777999999999998 56889999998765421 111 123344566677889999998865421
Q ss_pred cCCCceeEECCCCcEE-eecEEEEcccCCCCch
Q 023975 191 VSEGSDTYLTSTGDTI-NADCHFLCTGKPVGSD 222 (274)
Q Consensus 191 ~~~~~~~v~~~~g~~~-~~d~vv~a~G~~~~~~ 222 (274)
.+ .+|.||+|||..|..+
T Consensus 452 --------------~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 452 --------------QLQAFDETILASGIVPRTP 470 (671)
T ss_dssp --------------SSCCSSEEEECCCEEECCC
T ss_pred --------------HhhcCCEEEEccCCCcCCC
Confidence 13 7999999999876543
No 374
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.51 E-value=0.037 Score=43.92 Aligned_cols=34 Identities=21% Similarity=0.078 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 468999999999999999987 5999999998753
No 375
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=94.51 E-value=0.015 Score=54.27 Aligned_cols=92 Identities=13% Similarity=0.096 Sum_probs=64.4
Q ss_pred HHHHHHccCCchhhhHHHHhhhhCCCC-eEEEEeCCCccC-------C--cCChhHHHHHHHHHHhCCcEEEcCceeeee
Q 023975 120 TERLNQYQAGPTGVELAGEIAVDFPEK-KVTLVHKGSRLL-------E--FIGPKAGDKTRDWLISKKVDVKLGERVNLD 189 (274)
Q Consensus 120 ~~~~~~~~~g~~~~e~a~~l~~~~~~~-~v~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i 189 (274)
..++..+++|..|+..|..|. ..+. +|+++.+.+.+. + .......+...+.+++.||+++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~--~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLA--RLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHH--HTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST-
T ss_pred CCEEEEECccHHHHHHHHHHH--hcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc-
Confidence 345667788999999999998 4566 699999876532 1 12334555566778889999999887632
Q ss_pred ccCCCceeEECCCCcEEeecEEEEcccC-CCC
Q 023975 190 SVSEGSDTYLTSTGDTINADCHFLCTGK-PVG 220 (274)
Q Consensus 190 ~~~~~~~~v~~~~g~~~~~d~vv~a~G~-~~~ 220 (274)
. .+.+++++++.+|.||+|||. .|.
T Consensus 264 ----~--~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ----N--EITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ----T--SBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred ----c--eEEhhhcCccCCCEEEEecCCCCCC
Confidence 1 233344455789999999997 354
No 376
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.46 E-value=0.044 Score=43.22 Aligned_cols=35 Identities=31% Similarity=0.450 Sum_probs=29.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhhcCCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~g~~v~vie~~~~ 46 (274)
.+++|.|||+|.-|...|..|+.|++|+++|+++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIASKHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHHcCCEEEEEECCHH
Confidence 35899999999999998876668999999998764
No 377
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.44 E-value=0.038 Score=44.99 Aligned_cols=33 Identities=36% Similarity=0.470 Sum_probs=29.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPK 44 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~ 44 (274)
...+|+|+|||-+|..+|..|. .|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3479999999999999999886 587 89999997
No 378
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.44 E-value=0.09 Score=46.15 Aligned_cols=42 Identities=31% Similarity=0.566 Sum_probs=37.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeeccc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWAS 53 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~~ 53 (274)
++||++|||+|..|...|..|+ .|.+|+++||+++.|+.|..
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 4699999999999999999997 59999999999999977653
No 379
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.40 E-value=0.042 Score=43.65 Aligned_cols=31 Identities=35% Similarity=0.535 Sum_probs=27.9
Q ss_pred cEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
+|+|||+|..|.+.|..|+ .|+ +|+++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 7999999999999999887 588 899999875
No 380
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.39 E-value=0.04 Score=45.63 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=28.3
Q ss_pred cEEEEcCChHHHHHHHHhhcCCcEEEEcCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQFSADVTLIDPKE 45 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~~g~~v~vie~~~ 45 (274)
+|.|||+|..|+..|..|++|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 6999999999999999987799999999864
No 381
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.37 E-value=0.035 Score=45.26 Aligned_cols=33 Identities=36% Similarity=0.581 Sum_probs=29.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+|+|+|+|.+|+.++..|+ .|++|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 368999999999999999887 599999999874
No 382
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.36 E-value=0.043 Score=46.04 Aligned_cols=34 Identities=24% Similarity=0.477 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..++.|||.|..|+..|..|+ .|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 368999999999999999997 5999999998764
No 383
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.35 E-value=0.046 Score=46.24 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c-CC-cEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F-SA-DVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~-g~-~v~vie~~~~ 46 (274)
.++|.|||+|..|+..|..|+ . |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 368999999999999998886 7 89 9999998876
No 384
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.35 E-value=0.043 Score=42.20 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=29.0
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CC-cEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SA-DVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~-~v~vie~~~ 45 (274)
..+|+|||+|-.|..+|..|.+ |. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3689999999999999999975 86 899999864
No 385
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.34 E-value=0.046 Score=45.65 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=30.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.+.+|.|||.|..||..|..|+ +|++|+.+|-++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4579999999999999999998 699999999654
No 386
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.30 E-value=0.044 Score=41.10 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=28.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
+++|.|||+|..|...|..|. .|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 468999999999999998886 599999999864
No 387
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.26 E-value=0.046 Score=42.71 Aligned_cols=34 Identities=9% Similarity=0.151 Sum_probs=29.8
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+++|+|.|||..|...+..|. +|++|+++.|.+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 468999999999999999886 6999999998653
No 388
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.24 E-value=0.042 Score=43.19 Aligned_cols=33 Identities=30% Similarity=0.392 Sum_probs=29.6
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 57999999999999999987 5999999998754
No 389
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.23 E-value=0.057 Score=45.64 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=30.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|.|||+|.-|...|..|+ .|++|+++|+++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 468999999999999999987 5999999998753
No 390
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.22 E-value=0.045 Score=45.49 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=30.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|+|||.|..|...|..|. .|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 357999999999999999997 5999999998754
No 391
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=94.22 E-value=0.069 Score=44.39 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCC
Q 023975 165 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKP 218 (274)
Q Consensus 165 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~ 218 (274)
+.....+..+..+.+++++++|++|+.+++.+.|.+.+|+ +.||.||+|++..
T Consensus 205 ~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 205 TQAMFEHLNATLEHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp HHHHHHHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHH
T ss_pred HHHHHHHHHHhhcceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHH
Confidence 3333333344456678999999999888777888888875 9999999999853
No 392
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.13 E-value=0.048 Score=43.94 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=29.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
+..+|.|||+|.-|...|..|. .|++|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3469999999999999999886 599999999864
No 393
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.12 E-value=0.029 Score=42.28 Aligned_cols=34 Identities=18% Similarity=0.230 Sum_probs=29.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEE-EcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTL-IDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~v-ie~~~~ 46 (274)
+++|.|||+|..|.+.|..|. .|++|++ +++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 368999999999999999987 5999999 887654
No 394
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.08 E-value=0.061 Score=46.78 Aligned_cols=41 Identities=27% Similarity=0.416 Sum_probs=35.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCceeecc
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEITWA 52 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~~~~ 52 (274)
..+||+|||||++|+++|+.|+ +|++|+|+|+.+..++...
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~GtS~ 72 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGTSS 72 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCccc
Confidence 4589999999999999999997 5999999999876554443
No 395
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.07 E-value=0.05 Score=44.52 Aligned_cols=33 Identities=36% Similarity=0.588 Sum_probs=29.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
...|+|+|+|..|..+|..|+ .|++|+++++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 478999999999999999887 599999999864
No 396
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.03 E-value=0.053 Score=41.57 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=30.3
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||+|.-|.+.|..|. .|++|+++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 579999999999999999987 5999999998754
No 397
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.01 E-value=0.052 Score=44.56 Aligned_cols=33 Identities=39% Similarity=0.490 Sum_probs=29.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
...|+|||+|..|..+|..++ .|++|+++|+..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 478999999999999999887 599999999864
No 398
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.00 E-value=0.045 Score=43.34 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=29.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+++|.|||+|..|...|..|. .|++|+++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 368999999999999999987 5999999998753
No 399
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.98 E-value=0.071 Score=42.66 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=29.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~ 46 (274)
+.+|+|||+|..|.++|..|. .|+ +++++|..+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 368999999999999999886 577 9999998764
No 400
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.98 E-value=0.034 Score=42.27 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=28.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
...+++|+|+|..|...|..|. .|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3468999999999999999997 488 999998754
No 401
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=93.97 E-value=0.065 Score=41.61 Aligned_cols=34 Identities=15% Similarity=0.325 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++++|||+|-+|-++|+.|. .|.+|+|+.|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 578999999999999999997 4899999998754
No 402
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.96 E-value=0.075 Score=42.04 Aligned_cols=34 Identities=24% Similarity=0.550 Sum_probs=29.8
Q ss_pred CCcEEEEc-CChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIG-GGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIG-aG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+.+|.||| +|..|.+.|..|+ .|++|+++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 46899999 9999999999997 4999999998653
No 403
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.93 E-value=0.06 Score=42.69 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=28.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~~ 46 (274)
+.+|+|||+|..|.++|+.|. +|+ +++|+|..+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 468999999999999998886 577 8999998763
No 404
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.87 E-value=0.045 Score=45.89 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=28.1
Q ss_pred cEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
+|.|||+|..|+..|..|+ .|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 6999999999999999987 599999999864
No 405
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.84 E-value=0.045 Score=46.18 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=29.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.++|+|||+|..|...|..|. .|++|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 578999999999999998886 599999999853
No 406
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.78 E-value=0.059 Score=43.08 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=27.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.++|+|||+|.-|.+.|..|+ .|++|+++ +.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999997 59999999 654
No 407
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.74 E-value=0.082 Score=42.00 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||.|.-|...|..|. .|++|+++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 468999999999999999987 5999999998754
No 408
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.74 E-value=0.055 Score=44.35 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=29.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cC-------CcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FS-------ADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g-------~~v~vie~~~~ 46 (274)
+++|.|||+|.-|.+.|..|. .| ++|+++++.+.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 358999999999999999886 48 99999998765
No 409
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.73 E-value=0.068 Score=45.35 Aligned_cols=34 Identities=29% Similarity=0.352 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||+|.-|...|..|+ .|++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 368999999999999998887 5999999998764
No 410
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.73 E-value=0.065 Score=40.57 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=29.8
Q ss_pred CCCcEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGa-G~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+.+.|+|.|| |..|...+..|. +|++|+++.|++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3578999998 999999998886 6999999998753
No 411
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.73 E-value=0.063 Score=42.71 Aligned_cols=32 Identities=34% Similarity=0.531 Sum_probs=28.3
Q ss_pred CcEEEEcCChHHHHHHHHhh-cC--CcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FS--ADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g--~~v~vie~~~ 45 (274)
++|+|||+|..|.+.|..|. .| ++|+++|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 48999999999999999986 47 7999999865
No 412
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.71 E-value=0.061 Score=43.21 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=27.0
Q ss_pred cEEEEcCChHHHHHHHHhh-cCCcEEEEcC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDP 43 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~~v~vie~ 43 (274)
+|.|||+|..|...|..|. .|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 6999999999999999997 4999999998
No 413
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.69 E-value=0.066 Score=43.55 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 468999999999999999997 5999999998753
No 414
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.68 E-value=0.11 Score=41.67 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=29.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~~ 46 (274)
..+|.|||+|..|.++|+.|. +|. +++++|..+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~ 57 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVMED 57 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHH
Confidence 479999999999999999886 465 8999998653
No 415
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.63 E-value=0.074 Score=41.44 Aligned_cols=33 Identities=27% Similarity=0.360 Sum_probs=29.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.+.++|+|+|-+|.++|..|. .|.+|++++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 468999999999999999987 599999999874
No 416
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.61 E-value=0.064 Score=42.89 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=30.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||.|..|...|..|. .|++|+++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 468999999999999999987 5999999998754
No 417
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.58 E-value=0.064 Score=40.27 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=29.4
Q ss_pred CCcEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGa-G~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+++|+|.|| |..|...+..|. +|++|+++.|.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 468999996 999999998886 5999999999753
No 418
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.58 E-value=0.061 Score=42.50 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=29.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.++|.|||+|..|...|..|. .|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 368999999999999998886 599999999864
No 419
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.54 E-value=0.073 Score=45.19 Aligned_cols=41 Identities=32% Similarity=0.313 Sum_probs=36.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCceeec
Q 023975 11 GKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFEITW 51 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g~~~ 51 (274)
.+.+||+|||||++||+||+.|++ |++|+|+|+.+.+|+..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 346899999999999999999984 99999999999988653
No 420
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.52 E-value=0.068 Score=45.24 Aligned_cols=32 Identities=28% Similarity=0.536 Sum_probs=28.5
Q ss_pred CcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~ 45 (274)
++|.|||.|..|+..|..|+ . |++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 58999999999999998886 5 79999999864
No 421
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=93.44 E-value=0.1 Score=43.47 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=30.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (274)
..++|+|+|+|..|...+..+++ |++|.+++..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 35789999999999999999875 999999987543
No 422
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.41 E-value=0.11 Score=40.67 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=29.3
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++|+|.|+|..|...+..|. +|++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 58999999999999998886 6999999998754
No 423
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.40 E-value=0.1 Score=41.68 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=28.7
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~ 46 (274)
.+|+|||+|..|.++|..|. .+. ++.++|..+.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 68999999999999998886 466 9999998764
No 424
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.38 E-value=0.1 Score=42.97 Aligned_cols=35 Identities=26% Similarity=0.521 Sum_probs=30.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (274)
..+.|+|||+|..|..+|..+++ |++|++++..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 34789999999999999999984 999999987653
No 425
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.37 E-value=0.084 Score=44.84 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=28.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-c--CCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-F--SADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~--g~~v~vie~~~ 45 (274)
+++|.|||.|..|+..|..|+ . |++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 358999999999999999886 4 79999999754
No 426
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.36 E-value=0.096 Score=41.41 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=29.1
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
.++++|||+|.+|.++|..|. .|. +|++++|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 468999999999999999997 487 899999874
No 427
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.33 E-value=0.081 Score=41.74 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=30.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+.|.|||+|..|..+|..|+ .|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3578999999999999999997 599999999864
No 428
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.33 E-value=0.081 Score=41.87 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=30.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..++|.|||+|..|..+|..|+ .|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3578999999999999999987 599999999864
No 429
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=93.32 E-value=0.066 Score=44.34 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=30.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+.|+|||.|..|..+|..|+ .|.+|+++|+.+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3579999999999999999997 599999999865
No 430
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.30 E-value=0.089 Score=39.14 Aligned_cols=31 Identities=26% Similarity=0.432 Sum_probs=27.7
Q ss_pred cEEEEc-CChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 15 RVVVIG-GGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 15 ~v~IIG-aG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
+|+||| +|..|...|..|. .|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 9999999998886 599999999864
No 431
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.29 E-value=0.068 Score=42.17 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=29.0
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++|.|||+|..|...|..|. .|++|+++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 58999999999999999886 5999999998653
No 432
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.29 E-value=0.1 Score=40.01 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=29.0
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCC----cEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSA----DVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~----~v~vie~~~~ 46 (274)
++|.|||+|..|.+.|..|. .|+ +|+++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 58999999999999999886 587 9999998753
No 433
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.28 E-value=0.08 Score=42.34 Aligned_cols=31 Identities=29% Similarity=0.395 Sum_probs=27.7
Q ss_pred cEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
+|+|||+|..|.+.|..|. .|+ +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 6999999999999998886 588 999999874
No 434
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.27 E-value=0.083 Score=41.41 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=28.2
Q ss_pred CcEEEEcCChHHHHHHHHhhcCCcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~~g~~v~vie~~~~ 46 (274)
++|.|||+|..|...|..|.+|++|+++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~g~~V~~~~~~~~ 34 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLARRFPTLVWNRTFE 34 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHTTSCEEEECSSTH
T ss_pred CeEEEEcccHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 479999999999999987744999999998754
No 435
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.26 E-value=0.089 Score=41.12 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=28.2
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
++|.|||+|..|.+.|..|. .|+ +|+++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 47999999999999999987 488 899999864
No 436
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=93.26 E-value=0.061 Score=46.12 Aligned_cols=52 Identities=17% Similarity=0.079 Sum_probs=39.9
Q ss_pred HHHHHHHHHhC--CcEEEcCceeeeeccC-CCceeEECCCCcEEeecEEEEcccC
Q 023975 166 GDKTRDWLISK--KVDVKLGERVNLDSVS-EGSDTYLTSTGDTINADCHFLCTGK 217 (274)
Q Consensus 166 ~~~~~~~~~~~--gv~i~~~~~v~~i~~~-~~~~~v~~~~g~~~~~d~vv~a~G~ 217 (274)
...+.+.+.+. +.+|+++++|++|..+ ++.+.|++.+|+++.||.||+|++.
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCH
Confidence 34444444332 3579999999999875 5678888999989999999999874
No 437
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.17 E-value=0.066 Score=44.33 Aligned_cols=29 Identities=21% Similarity=0.345 Sum_probs=26.5
Q ss_pred CcEEEEcCChHHHHHHHHhh-c-CCcEEEEc
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-F-SADVTLID 42 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~-g~~v~vie 42 (274)
++|+|||+|..|.+.|..|+ . |++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48999999999999999995 4 99999999
No 438
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.15 E-value=0.084 Score=44.54 Aligned_cols=34 Identities=32% Similarity=0.579 Sum_probs=31.0
Q ss_pred CCcEEEEcCChHHHHHHHHhhcCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQFSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~g~~v~vie~~~~ 46 (274)
.++|+|+|||-.|...|..|.++++|.++|+...
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~ 268 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQ 268 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHH
T ss_pred ccEEEEEcchHHHHHHHHHhhhcCceEEEecCHH
Confidence 4689999999999999999988899999999764
No 439
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.12 E-value=0.094 Score=44.21 Aligned_cols=34 Identities=29% Similarity=0.285 Sum_probs=30.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+.++|+|+|..|.++|..|+ .|++|+++|+.+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3578999999999999999997 599999999864
No 440
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.92 E-value=0.031 Score=42.34 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=28.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPK 44 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~ 44 (274)
.++|.|||.|..|.+.|..|+ .|++|+.+++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 358999999999999999997 59999999884
No 441
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.92 E-value=0.13 Score=41.09 Aligned_cols=33 Identities=39% Similarity=0.590 Sum_probs=27.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
..+|+|||+|..|.+.|+.|. .+. +++++|..+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 469999999999999998886 353 799999864
No 442
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.87 E-value=0.1 Score=41.14 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=27.9
Q ss_pred cEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEY 46 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~~ 46 (274)
+|+|||+|..|.+.|..|. .++ +++++|..+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~ 36 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAED 36 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChH
Confidence 7999999999999999886 476 8999998653
No 443
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.83 E-value=0.11 Score=40.62 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=28.1
Q ss_pred cEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+|.|||+|..|.+.|..|. .|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 34 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQS 34 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 6999999999999999886 5999999998643
No 444
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.80 E-value=0.13 Score=39.66 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=28.8
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++|.|||+|..|...|..|. .|++|.++++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~ 37 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLE 37 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHH
Confidence 58999999999999999887 4899999998643
No 445
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.78 E-value=0.11 Score=40.13 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=27.8
Q ss_pred cEEEEcCChHHHHHHHHhh-cC-CcEEEEcCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FS-ADVTLIDPKE 45 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g-~~v~vie~~~ 45 (274)
+|.|||+|..|...|..|. .| ++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999886 48 9999999864
No 446
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.69 E-value=0.14 Score=45.79 Aligned_cols=34 Identities=38% Similarity=0.500 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||+|.-|...|..|+ .|++|+++|+++.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 468999999999999999987 5999999998754
No 447
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.65 E-value=0.12 Score=41.42 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=28.8
Q ss_pred CcEEEEcCChHHHHHHHHhh-cC----CcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FS----ADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g----~~v~vie~~~~ 46 (274)
++|.|||+|.-|.+.|..|. .| ++|+++++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 57999999999999999886 47 89999998753
No 448
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.64 E-value=0.11 Score=44.01 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=30.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
....|+|||.|..|..+|..|+ .|++|+++|+.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999997 599999999865
No 449
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.63 E-value=0.14 Score=40.95 Aligned_cols=33 Identities=39% Similarity=0.537 Sum_probs=27.7
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cC--CcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FS--ADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g--~~v~vie~~~ 45 (274)
..+|+|||+|..|.+.|..|. ++ .++.++|..+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 369999999999999998886 45 4899999754
No 450
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.62 E-value=0.13 Score=39.65 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=28.8
Q ss_pred CcEEEEcCChHHHHHHHHhh-cC----CcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FS----ADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g----~~v~vie~~~~ 46 (274)
++|.|||+|.-|.+.|..|. .| ++|+++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 58999999999999999886 48 79999998754
No 451
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.62 E-value=0.12 Score=41.13 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=28.1
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~~ 46 (274)
++|+|||+|..|.++|+.|. .+. +++++|..+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 37999999999999999886 465 8999998764
No 452
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.60 E-value=0.11 Score=40.63 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=29.5
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~~ 46 (274)
.++++|||+|-+|-++|..|. .|. +|+++.|+..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 468999999999999999997 488 8999998753
No 453
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.59 E-value=0.14 Score=40.93 Aligned_cols=34 Identities=21% Similarity=0.459 Sum_probs=28.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
...+|+|||+|..|.++|+.|. .+. ++.++|..+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 3468999999999999999986 455 899999854
No 454
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=92.53 E-value=0.11 Score=40.86 Aligned_cols=32 Identities=28% Similarity=0.236 Sum_probs=28.4
Q ss_pred cEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 15 RVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 15 ~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+|.|||+|..|...|..|. .|++|+++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6999999999999998886 5999999998754
No 455
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.52 E-value=0.083 Score=41.17 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=29.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.++++|+|+|-+|.++|..|. .|.+|++++|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 468999999999999999987 589999999874
No 456
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.45 E-value=0.18 Score=41.36 Aligned_cols=35 Identities=34% Similarity=0.532 Sum_probs=30.6
Q ss_pred CCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (274)
..+.|+|||+|..|...+..+++ |++|++++..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 35789999999999999999985 999999997654
No 457
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.42 E-value=0.13 Score=40.15 Aligned_cols=33 Identities=30% Similarity=0.368 Sum_probs=29.0
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.++++|||+|-.|.+.|..|. .|++|++++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 368999999999999999987 488999999874
No 458
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.39 E-value=0.17 Score=40.56 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=28.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
...+|+|||+|..|.++|+.|. +|. +++++|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 3579999999999999998886 565 899999864
No 459
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.38 E-value=0.14 Score=41.16 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=28.7
Q ss_pred CCCcEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 12 KNKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGa-G~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+.|+|.|| |..|...+..|. +|++|+++++.+.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 4578999998 999999998886 6999999998753
No 460
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.37 E-value=0.079 Score=42.93 Aligned_cols=33 Identities=33% Similarity=0.393 Sum_probs=29.3
Q ss_pred CcEEEEcCChHHHHHHHHhh-cC-------CcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FS-------ADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g-------~~v~vie~~~~ 46 (274)
++|.|||+|.-|.+.|..|. .| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999987 47 89999998765
No 461
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=92.36 E-value=0.14 Score=41.60 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=29.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+.|+|+|+|..|..+|..|. .|++|++.|+..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~ 206 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNK 206 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3578999999999999999997 599999999753
No 462
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=92.36 E-value=0.14 Score=42.44 Aligned_cols=34 Identities=35% Similarity=0.457 Sum_probs=29.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
....|+|||+|..|..+|..|+ .|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3578999999999999999987 588 899999864
No 463
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.29 E-value=0.16 Score=37.83 Aligned_cols=31 Identities=29% Similarity=0.417 Sum_probs=27.6
Q ss_pred cEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 15 RVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 15 ~v~IIGa-G~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
+|+|+|| |..|...+..|. +|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 999999998886 699999999875
No 464
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=92.25 E-value=0.18 Score=40.66 Aligned_cols=33 Identities=24% Similarity=0.568 Sum_probs=27.7
Q ss_pred CCcEEEEcC-ChHHHHHHHHhh-cC--CcEEEEcCCC
Q 023975 13 NKRVVVIGG-GVAGSLVAKSLQ-FS--ADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGa-G~aGl~~A~~L~-~g--~~v~vie~~~ 45 (274)
+.+|+|||+ |..|.++|+.+. +| .+++++|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 468999997 999999998875 45 4899999854
No 465
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=92.20 E-value=0.15 Score=40.55 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=28.9
Q ss_pred CCCcEEEEcCC-hHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGG-VAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG-~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
...+++|||+| ..|..+|..|. .|.+|++++++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 35799999999 67999998886 599999999863
No 466
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.19 E-value=0.13 Score=44.58 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=31.1
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCc
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYF 47 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~ 47 (274)
.+++|+|+|..|...|..|. .|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 68999999999999999997 59999999998754
No 467
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.18 E-value=0.21 Score=42.43 Aligned_cols=51 Identities=18% Similarity=0.137 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCc----EEeecEEEEcccC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGD----TINADCHFLCTGK 217 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~----~~~~d~vv~a~G~ 217 (274)
.+.+.+.+.+.. +|+++++|++|+.+++.+.|.+.+|+ ++.||.||+|++.
T Consensus 242 ~l~~~l~~~l~~---~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~ 296 (498)
T 2iid_A 242 KLPTAMYRDIQD---KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTS 296 (498)
T ss_dssp HHHHHHHHHTGG---GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCH
T ss_pred HHHHHHHHhccc---ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCCh
Confidence 456666665543 79999999999988888888776664 5899999999985
No 468
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.17 E-value=0.16 Score=40.59 Aligned_cols=34 Identities=24% Similarity=0.471 Sum_probs=28.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
+..+|+|||+|..|.+.|+.|. .+. ++.++|..+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3469999999999999998886 344 799999753
No 469
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=92.16 E-value=0.18 Score=42.72 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHhCCcEEEcCceeeeeccCCCce-eEE-CCCCcEEeecEEEEcccCCCC
Q 023975 164 KAGDKTRDWLISKKVDVKLGERVNLDSVSEGSD-TYL-TSTGDTINADCHFLCTGKPVG 220 (274)
Q Consensus 164 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~-~~~g~~~~~d~vv~a~G~~~~ 220 (274)
.+...+.+.+++.|++++.++.+ ++..+++.+ .+. ..++.++.+|.||+|||..+.
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 46677777778889999999999 987665543 233 223335889999999997653
No 470
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=92.15 E-value=0.12 Score=42.93 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=30.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+.|+|||.|..|..+|..|+ .|.+|+++|+.+
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 3579999999999999999997 599999999865
No 471
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.14 E-value=0.16 Score=43.27 Aligned_cols=35 Identities=14% Similarity=0.090 Sum_probs=30.7
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+..+|.|||.|.-|...|..|. .|++|+++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3469999999999999999997 5999999998764
No 472
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=92.11 E-value=0.21 Score=40.99 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=31.3
Q ss_pred CCCCCCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCC
Q 023975 9 SEGKNKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEY 46 (274)
Q Consensus 9 ~~~~~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~ 46 (274)
|..+.++|+|+|+|..|...+..+++ |++|.+++..+.
T Consensus 7 m~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 7 LRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp TSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 33455799999999999999998874 999999987653
No 473
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=92.09 E-value=0.19 Score=40.28 Aligned_cols=33 Identities=24% Similarity=0.452 Sum_probs=28.7
Q ss_pred CcEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGa-G~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++|+|.|| |..|...+..|. +|++|+++.+...
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 48 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSS 48 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChH
Confidence 48999996 999999998886 6999999998753
No 474
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.06 E-value=0.11 Score=44.24 Aligned_cols=35 Identities=20% Similarity=0.195 Sum_probs=28.8
Q ss_pred CCCCcEEEEcCChHHHH-HHHHhh-cCCcEEEEcCCC
Q 023975 11 GKNKRVVVIGGGVAGSL-VAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 11 ~~~~~v~IIGaG~aGl~-~A~~L~-~g~~v~vie~~~ 45 (274)
...++|.|||.|-+|++ +|..|+ +|++|++.|...
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 34579999999999997 688886 699999999764
No 475
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.01 E-value=0.16 Score=40.40 Aligned_cols=34 Identities=15% Similarity=0.354 Sum_probs=29.3
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
..++++|+|+|-+|-++|..|+ .|. +|+|+.|.+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3578999999999999999997 588 899999873
No 476
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.01 E-value=0.19 Score=40.54 Aligned_cols=34 Identities=32% Similarity=0.317 Sum_probs=29.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||+|..|.+.|..|+ .|++|+++++.+.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 358999999999999999997 5999999998753
No 477
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.99 E-value=0.19 Score=40.50 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=29.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|.|||.|.-|.+.|..|+ .|++|+++++++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~ 42 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRS 42 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 368999999999999999997 5999999998753
No 478
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=91.98 E-value=0.1 Score=45.87 Aligned_cols=38 Identities=26% Similarity=0.280 Sum_probs=33.8
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCCcee
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEYFEI 49 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~~g~ 49 (274)
..+||+|||||++|+++|+.|+ +|++|+|+|+.+..++
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 3589999999999999999997 5999999999987764
No 479
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=91.97 E-value=0.2 Score=39.23 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=29.0
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCC---cEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSA---DVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~---~v~vie~~~~ 46 (274)
++|.|||+|.-|.+.|..|. .|+ +|+++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 68999999999999998886 588 9999998764
No 480
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=91.96 E-value=0.18 Score=39.50 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=29.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
..+.++|+|+|-+|-++|..|. .|. +|+|+.|+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3578999999999999999887 588 699999874
No 481
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=91.95 E-value=0.17 Score=39.81 Aligned_cols=33 Identities=36% Similarity=0.509 Sum_probs=28.8
Q ss_pred CcEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGa-G~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++|+|.|| |..|...+..|. +|++|+++.|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46999998 999999998886 6999999988654
No 482
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=91.91 E-value=0.11 Score=40.99 Aligned_cols=34 Identities=15% Similarity=0.289 Sum_probs=26.6
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
..+|.+||-|.-|...|..|. .|++|+++++++.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 358999999999999999997 5999999998764
No 483
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=91.79 E-value=0.097 Score=41.17 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=27.4
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++|.|||+|..|...|..|. .|++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 58999999999999998886 599999998 54
No 484
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.78 E-value=0.23 Score=39.32 Aligned_cols=34 Identities=29% Similarity=0.591 Sum_probs=30.1
Q ss_pred CCcEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGa-G~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+++|+|.|| |..|...+..|. +|++|+++.+...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 578999998 999999998886 6999999998764
No 485
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.77 E-value=0.19 Score=42.63 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
+.+|.|||.|.-|...|..|. .|++|+++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 368999999999999999997 5999999999764
No 486
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=91.73 E-value=0.26 Score=40.29 Aligned_cols=44 Identities=14% Similarity=0.049 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCcEEEcCceeeeeccCCCceeEECCCCcEEeecEEEEcccCCC
Q 023975 165 AGDKTRDWLISKKVDVKLGERVNLDSVSEGSDTYLTSTGDTINADCHFLCTGKPV 219 (274)
Q Consensus 165 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vv~a~G~~~ 219 (274)
+.+.+.+.+++.|++++.+++|++++.. +++.+|.||.|.|...
T Consensus 100 l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 100 LVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNH 143 (381)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGG
T ss_pred HHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCc
Confidence 4566777777889999999999988642 1257899999999654
No 487
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=91.71 E-value=0.14 Score=42.60 Aligned_cols=34 Identities=32% Similarity=0.300 Sum_probs=30.2
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
..+.++|||.|..|..+|..|+ .|.+|++.|+.+
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4579999999999999999997 599999999754
No 488
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.63 E-value=0.21 Score=40.16 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
.++|.|||.|..|...|..|+ .|++|+++++...
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 478999999999999999997 5999999998654
No 489
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=91.63 E-value=0.18 Score=41.31 Aligned_cols=36 Identities=28% Similarity=0.349 Sum_probs=31.7
Q ss_pred CCcEEEEcCChHHHHHHHHhhc-CCcEEEEcCCCCce
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQF-SADVTLIDPKEYFE 48 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~~-g~~v~vie~~~~~g 48 (274)
..+++|+|||+.+...|..++. |++|+++|..+.+.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~ 240 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA 240 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc
Confidence 4699999999999999988874 99999999887654
No 490
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.62 E-value=0.17 Score=39.65 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=29.4
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
..++++|+|+|-+|-++|+.|. .|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3579999999999999999997 587 899999864
No 491
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=91.61 E-value=0.21 Score=38.84 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=29.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
..++++|+|+|-+|-++|+.|. .|. +|+++.|+.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3578999999999999999987 585 899999864
No 492
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=91.55 E-value=0.2 Score=37.33 Aligned_cols=31 Identities=23% Similarity=0.393 Sum_probs=27.7
Q ss_pred cEEEEcC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 15 RVVVIGG-GVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 15 ~v~IIGa-G~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
+|+|.|| |..|...+..|. +|++|+++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 999999998886 699999999864
No 493
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=91.54 E-value=0.22 Score=38.98 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=29.1
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA-DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~-~v~vie~~~ 45 (274)
..++++|+|+|-+|-++|..|. .|. +|+++.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 3578999999999999999987 585 899999864
No 494
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.47 E-value=0.19 Score=38.88 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=28.5
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCc-EEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSAD-VTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~-v~vie~~~~ 46 (274)
++|.|||+|..|...|..|. .|++ |.++++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~ 45 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEE 45 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHH
Confidence 58999999999999998887 4998 899998653
No 495
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=91.47 E-value=0.16 Score=40.85 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=27.1
Q ss_pred CCcEEEEcC-ChHHHHHHHHhh-cCC-------cEEEEcCC
Q 023975 13 NKRVVVIGG-GVAGSLVAKSLQ-FSA-------DVTLIDPK 44 (274)
Q Consensus 13 ~~~v~IIGa-G~aGl~~A~~L~-~g~-------~v~vie~~ 44 (274)
..+|+|||| |..|.+.+..|. +++ ++.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 368999998 999999998886 464 79999976
No 496
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.46 E-value=0.21 Score=42.39 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=29.7
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKEY 46 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~~ 46 (274)
++|.|||.|.-|...|..|. .|++|+++++++.
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 68999999999999999997 5999999998753
No 497
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=91.44 E-value=0.19 Score=41.11 Aligned_cols=32 Identities=28% Similarity=0.586 Sum_probs=28.2
Q ss_pred CcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 14 KRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
++|+|||+|..|...|..|+ .|+++++++..+
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 58999999999999999887 499999998754
No 498
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=91.40 E-value=0.25 Score=36.83 Aligned_cols=32 Identities=16% Similarity=0.303 Sum_probs=27.6
Q ss_pred CcEEEEcC-ChHHHHHHHHhh--cCCcEEEEcCCC
Q 023975 14 KRVVVIGG-GVAGSLVAKSLQ--FSADVTLIDPKE 45 (274)
Q Consensus 14 ~~v~IIGa-G~aGl~~A~~L~--~g~~v~vie~~~ 45 (274)
+.|+|.|| |..|..+|..|. +|++|+++.|++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 46999995 999999998886 599999999864
No 499
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=91.34 E-value=0.25 Score=39.58 Aligned_cols=34 Identities=21% Similarity=0.459 Sum_probs=28.0
Q ss_pred CCCcEEEEcCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 023975 12 KNKRVVVIGGGVAGSLVAKSLQ-FSA--DVTLIDPKE 45 (274)
Q Consensus 12 ~~~~v~IIGaG~aGl~~A~~L~-~g~--~v~vie~~~ 45 (274)
++.+|+|||+|..|.+.|+.|. .+. ++.++|...
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3479999999999999998886 343 799999753
No 500
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=91.33 E-value=0.23 Score=38.95 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=27.9
Q ss_pred CCcEEEEcCChHHHHHHHHhh-cCCcEEEEcCCC
Q 023975 13 NKRVVVIGGGVAGSLVAKSLQ-FSADVTLIDPKE 45 (274)
Q Consensus 13 ~~~v~IIGaG~aGl~~A~~L~-~g~~v~vie~~~ 45 (274)
.+.++|+|+|-.|.++|..|. .| +|++++|+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 468999999988999999987 59 999999864
Done!