Query 023990
Match_columns 274
No_of_seqs 140 out of 1306
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 08:07:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023990.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023990hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02580 trehalose-phosphatase 100.0 1.6E-43 3.4E-48 311.2 29.6 264 1-265 107-382 (384)
2 PLN03017 trehalose-phosphatase 100.0 3.6E-42 7.7E-47 300.0 30.0 264 1-264 99-363 (366)
3 PLN02151 trehalose-phosphatase 100.0 1.2E-41 2.6E-46 295.9 29.5 267 1-267 86-352 (354)
4 PRK10187 trehalose-6-phosphate 100.0 6E-38 1.3E-42 268.2 29.0 233 12-264 13-248 (266)
5 TIGR00685 T6PP trehalose-phosp 100.0 5.1E-35 1.1E-39 247.7 26.7 235 11-260 1-243 (244)
6 PRK10976 putative hydrolase; P 100.0 3.9E-35 8.4E-40 251.8 21.5 224 13-260 2-264 (266)
7 PRK14501 putative bifunctional 100.0 2E-34 4.3E-39 277.8 28.0 239 2-261 480-725 (726)
8 COG1877 OtsB Trehalose-6-phosp 100.0 2.6E-34 5.6E-39 241.6 24.8 247 2-264 6-256 (266)
9 PRK10513 sugar phosphate phosp 100.0 6.1E-35 1.3E-39 251.1 21.0 225 12-260 2-268 (270)
10 PRK15126 thiamin pyrimidine py 100.0 5.6E-35 1.2E-39 251.6 18.9 225 13-261 2-263 (272)
11 COG0561 Cof Predicted hydrolas 100.0 1E-34 2.2E-39 248.9 20.2 223 12-261 2-262 (264)
12 PLN02205 alpha,alpha-trehalose 100.0 2.3E-33 4.9E-38 270.9 26.5 244 3-263 585-848 (854)
13 PF02358 Trehalose_PPase: Treh 100.0 2E-34 4.3E-39 242.9 16.6 224 17-249 1-234 (235)
14 PRK03669 mannosyl-3-phosphogly 100.0 3.5E-33 7.5E-38 240.2 21.8 228 10-262 4-270 (271)
15 PRK01158 phosphoglycolate phos 100.0 3.4E-33 7.5E-38 234.6 19.5 214 13-260 3-229 (230)
16 PLN02887 hydrolase family prot 100.0 5.2E-33 1.1E-37 257.9 21.1 230 7-260 302-579 (580)
17 PLN03063 alpha,alpha-trehalose 100.0 8.6E-31 1.9E-35 252.9 28.8 250 3-264 496-788 (797)
18 PRK10530 pyridoxal phosphate ( 100.0 2.1E-31 4.6E-36 229.2 20.7 223 13-260 3-271 (272)
19 PF08282 Hydrolase_3: haloacid 100.0 1.4E-31 2.9E-36 226.7 17.7 211 16-256 1-254 (254)
20 PLN03064 alpha,alpha-trehalose 100.0 1.3E-29 2.9E-34 244.1 28.9 212 3-224 580-812 (934)
21 TIGR01487 SPP-like sucrose-pho 100.0 5.9E-31 1.3E-35 219.0 15.8 208 13-256 1-215 (215)
22 TIGR00099 Cof-subfamily Cof su 100.0 1.6E-30 3.4E-35 222.0 17.7 218 15-256 1-256 (256)
23 TIGR01482 SPP-subfamily Sucros 100.0 5.9E-31 1.3E-35 220.3 14.8 211 16-259 1-224 (225)
24 TIGR01486 HAD-SF-IIB-MPGP mann 100.0 1.1E-29 2.3E-34 216.8 21.8 218 15-260 1-256 (256)
25 TIGR01485 SPP_plant-cyano sucr 100.0 6.3E-30 1.4E-34 217.4 18.2 227 14-259 2-246 (249)
26 TIGR01484 HAD-SF-IIB HAD-super 100.0 7.6E-30 1.6E-34 210.5 14.5 197 15-233 1-204 (204)
27 PRK00192 mannosyl-3-phosphogly 100.0 1.7E-28 3.6E-33 211.4 22.9 225 12-261 3-271 (273)
28 TIGR02471 sucr_syn_bact_C sucr 100.0 2.2E-29 4.8E-34 212.4 14.6 217 15-259 1-234 (236)
29 PLN02382 probable sucrose-phos 100.0 4.5E-28 9.8E-33 218.6 21.1 240 10-270 6-270 (413)
30 PTZ00174 phosphomannomutase; P 100.0 1.7E-27 3.6E-32 202.1 19.4 203 11-237 3-234 (247)
31 TIGR02463 MPGP_rel mannosyl-3- 100.0 7.6E-28 1.6E-32 201.0 16.6 195 15-233 1-220 (221)
32 PLN02423 phosphomannomutase 99.9 2E-25 4.3E-30 188.9 21.5 214 9-260 3-244 (245)
33 PF05116 S6PP: Sucrose-6F-phos 99.9 7E-27 1.5E-31 197.9 11.3 200 12-239 1-212 (247)
34 PRK14502 bifunctional mannosyl 99.9 5E-25 1.1E-29 204.4 22.9 211 11-238 414-661 (694)
35 PRK12702 mannosyl-3-phosphogly 99.9 1.9E-24 4E-29 182.6 16.0 201 13-236 1-254 (302)
36 TIGR02461 osmo_MPG_phos mannos 99.9 3.4E-24 7.4E-29 179.1 15.8 197 15-234 1-225 (225)
37 KOG1050 Trehalose-6-phosphate 99.9 3.8E-21 8.3E-26 181.6 22.2 226 3-257 492-731 (732)
38 COG3769 Predicted hydrolase (H 99.8 3.1E-18 6.7E-23 136.8 16.2 208 10-236 4-237 (274)
39 KOG3189 Phosphomannomutase [Li 99.6 1.3E-13 2.9E-18 108.6 15.2 192 10-220 8-227 (252)
40 TIGR02468 sucrsPsyn_pln sucros 99.5 1.1E-12 2.3E-17 128.3 14.4 192 10-219 767-990 (1050)
41 PF03332 PMM: Eukaryotic phosp 99.4 6.4E-12 1.4E-16 102.0 10.7 190 40-260 1-219 (220)
42 TIGR01670 YrbI-phosphatas 3-de 99.3 4.2E-12 9E-17 100.0 8.1 72 184-263 76-152 (154)
43 PRK09484 3-deoxy-D-manno-octul 99.3 6.4E-12 1.4E-16 101.8 7.1 56 184-247 96-153 (183)
44 PRK11133 serB phosphoserine ph 99.3 3.7E-12 8E-17 111.6 5.0 68 182-258 246-317 (322)
45 cd01427 HAD_like Haloacid deha 99.0 1.3E-09 2.8E-14 82.8 7.8 55 15-69 1-59 (139)
46 smart00775 LNS2 LNS2 domain. T 99.0 7.5E-10 1.6E-14 87.3 6.2 72 15-86 1-90 (157)
47 TIGR01689 EcbF-BcbF capsule bi 98.8 1.5E-08 3.2E-13 76.4 5.4 52 14-65 2-55 (126)
48 TIGR02726 phenyl_P_delta pheny 98.7 7.9E-09 1.7E-13 82.3 4.0 72 184-263 82-158 (169)
49 TIGR01684 viral_ppase viral ph 98.7 7.6E-08 1.7E-12 82.0 7.6 76 8-86 121-202 (301)
50 COG1778 Low specificity phosph 98.6 3.5E-08 7.6E-13 75.5 2.3 72 182-261 81-157 (170)
51 PHA03398 viral phosphatase sup 98.4 5.4E-07 1.2E-11 77.0 6.8 72 10-86 125-204 (303)
52 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.1 2.6E-06 5.7E-11 72.4 4.8 65 14-84 2-75 (249)
53 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.0 6.7E-06 1.4E-10 70.2 4.4 49 13-63 1-50 (257)
54 COG0560 SerB Phosphoserine pho 98.0 9.9E-06 2.1E-10 67.1 5.0 58 182-247 142-200 (212)
55 TIGR01681 HAD-SF-IIIC HAD-supe 98.0 1.8E-05 3.9E-10 60.2 5.7 55 14-68 1-64 (128)
56 PRK10444 UMP phosphatase; Prov 98.0 8.7E-06 1.9E-10 69.1 4.3 48 13-66 1-49 (248)
57 TIGR01672 AphA HAD superfamily 97.9 4.2E-05 9E-10 64.3 6.8 57 3-59 52-139 (237)
58 TIGR01452 PGP_euk phosphoglyco 97.9 1.5E-05 3.3E-10 68.8 4.3 45 12-62 1-46 (279)
59 PLN02645 phosphoglycolate phos 97.8 1.6E-05 3.5E-10 69.8 3.9 47 12-64 27-74 (311)
60 TIGR01662 HAD-SF-IIIA HAD-supe 97.7 3.4E-05 7.4E-10 58.7 3.9 47 14-60 1-51 (132)
61 TIGR01664 DNA-3'-Pase DNA 3'-p 97.7 9.9E-05 2.2E-09 58.7 6.3 49 13-61 13-69 (166)
62 TIGR01525 ATPase-IB_hvy heavy 97.6 0.00036 7.8E-09 66.2 9.9 57 10-68 361-419 (556)
63 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.3 0.00026 5.6E-09 57.7 4.2 45 183-235 146-190 (201)
64 TIGR00338 serB phosphoserine p 97.3 0.00018 3.9E-09 59.6 3.1 63 184-254 152-217 (219)
65 TIGR01488 HAD-SF-IB Haloacid D 97.3 0.00014 3E-09 58.0 2.3 41 178-222 137-177 (177)
66 PF13344 Hydrolase_6: Haloacid 97.3 0.00024 5.2E-09 51.6 3.2 40 16-61 1-41 (101)
67 PRK10671 copA copper exporting 97.3 0.00033 7.1E-09 69.6 5.2 68 175-257 694-765 (834)
68 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.2 0.00032 7E-09 57.3 4.0 46 182-235 153-198 (202)
69 TIGR02137 HSK-PSP phosphoserin 97.2 0.00036 7.7E-09 57.4 4.3 66 182-259 130-198 (203)
70 COG1778 Low specificity phosph 97.2 0.00039 8.5E-09 53.6 4.1 58 11-68 6-69 (170)
71 PRK11009 aphA acid phosphatase 97.2 0.00087 1.9E-08 56.3 5.9 25 2-26 51-76 (237)
72 TIGR01668 YqeG_hyp_ppase HAD s 97.2 0.001 2.2E-08 53.1 6.0 48 10-61 22-70 (170)
73 TIGR01460 HAD-SF-IIA Haloacid 97.2 0.00054 1.2E-08 57.7 4.5 46 16-67 1-50 (236)
74 PHA02530 pseT polynucleotide k 97.1 0.0012 2.6E-08 57.5 6.5 59 10-68 155-221 (300)
75 TIGR02726 phenyl_P_delta pheny 97.1 0.00061 1.3E-08 54.3 4.0 59 11-69 5-69 (169)
76 TIGR00213 GmhB_yaeD D,D-heptos 97.1 0.00042 9.2E-09 55.6 3.1 61 185-253 108-175 (176)
77 TIGR01116 ATPase-IIA1_Ca sarco 97.1 0.00086 1.9E-08 67.3 5.8 66 176-256 613-682 (917)
78 TIGR01656 Histidinol-ppas hist 97.1 0.00062 1.3E-08 52.9 3.7 47 14-60 1-53 (147)
79 TIGR01497 kdpB K+-transporting 97.1 0.0008 1.7E-08 64.7 5.1 67 175-256 490-560 (675)
80 PF08235 LNS2: LNS2 (Lipin/Ned 97.0 0.00091 2E-08 52.3 4.5 51 15-65 1-58 (157)
81 PF06437 ISN1: IMP-specific 5' 97.0 0.15 3.2E-06 45.3 18.4 189 11-212 145-378 (408)
82 TIGR01512 ATPase-IB2_Cd heavy 97.0 0.0013 2.9E-08 62.1 5.8 66 176-256 408-478 (536)
83 TIGR01511 ATPase-IB1_Cu copper 96.9 0.0021 4.7E-08 61.0 6.9 66 176-256 449-518 (562)
84 PRK13222 phosphoglycolate phos 96.9 0.0022 4.8E-08 53.2 6.3 67 184-258 150-223 (226)
85 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.9 0.0013 2.8E-08 55.6 4.7 48 10-63 5-53 (242)
86 PRK13582 thrH phosphoserine ph 96.9 0.0013 2.9E-08 53.8 4.3 66 184-261 132-200 (205)
87 COG2179 Predicted hydrolase of 96.9 0.0043 9.2E-08 48.5 6.6 56 10-69 25-81 (175)
88 PF08645 PNK3P: Polynucleotide 96.8 0.001 2.2E-08 52.5 3.2 44 14-57 1-52 (159)
89 TIGR01685 MDP-1 magnesium-depe 96.8 0.0022 4.8E-08 51.3 4.9 57 13-69 2-81 (174)
90 PLN02954 phosphoserine phospha 96.8 0.0033 7.3E-08 52.2 6.0 67 182-256 153-223 (224)
91 PF09419 PGP_phosphatase: Mito 96.7 0.0034 7.4E-08 49.7 5.5 46 10-59 38-86 (168)
92 PLN02954 phosphoserine phospha 96.7 0.0028 6E-08 52.7 5.2 33 36-68 85-118 (224)
93 PRK06769 hypothetical protein; 96.7 0.0016 3.5E-08 52.1 3.5 50 11-60 2-54 (173)
94 PRK08942 D,D-heptose 1,7-bisph 96.6 0.0017 3.6E-08 52.3 3.3 64 186-257 106-177 (181)
95 PTZ00445 p36-lilke protein; Pr 96.6 0.0033 7.3E-08 51.3 4.8 58 5-62 34-103 (219)
96 TIGR01533 lipo_e_P4 5'-nucleot 96.6 0.0038 8.2E-08 53.4 5.4 61 3-63 65-147 (266)
97 COG2217 ZntA Cation transport 96.6 0.0035 7.6E-08 60.7 5.7 70 173-257 579-652 (713)
98 COG4087 Soluble P-type ATPase 96.6 0.0033 7E-08 47.1 4.2 64 183-258 80-148 (152)
99 COG4030 Uncharacterized protei 96.6 0.014 2.9E-07 48.1 8.1 58 182-244 189-247 (315)
100 smart00577 CPDc catalytic doma 96.6 0.0044 9.6E-08 48.2 5.1 57 12-68 1-78 (148)
101 TIGR00338 serB phosphoserine p 96.5 0.0047 1E-07 51.1 5.3 18 9-26 10-27 (219)
102 PRK09552 mtnX 2-hydroxy-3-keto 96.5 0.0037 7.9E-08 51.9 4.5 69 182-262 146-218 (219)
103 PRK13225 phosphoglycolate phos 96.5 0.0077 1.7E-07 51.9 6.5 70 184-261 196-272 (273)
104 TIGR01675 plant-AP plant acid 96.5 0.0054 1.2E-07 51.1 5.4 54 10-63 74-149 (229)
105 COG0647 NagD Predicted sugar p 96.5 0.0031 6.8E-08 53.9 4.0 50 11-66 6-59 (269)
106 PRK11033 zntA zinc/cadmium/mer 96.4 0.0037 8.1E-08 61.3 4.6 66 175-256 611-680 (741)
107 PRK13223 phosphoglycolate phos 96.4 0.0073 1.6E-07 52.0 5.8 71 178-257 153-230 (272)
108 TIGR01524 ATPase-IIIB_Mg magne 96.4 0.0076 1.7E-07 60.2 6.7 69 173-256 582-654 (867)
109 PRK01122 potassium-transportin 96.4 0.0053 1.1E-07 59.3 5.3 68 174-256 488-559 (679)
110 KOG0210 P-type ATPase [Inorgan 96.3 0.0035 7.7E-08 59.2 3.7 67 176-254 763-830 (1051)
111 TIGR01523 ATPase-IID_K-Na pota 96.3 0.0058 1.3E-07 62.2 5.5 67 175-256 727-798 (1053)
112 TIGR01106 ATPase-IIC_X-K sodiu 96.3 0.0067 1.4E-07 61.5 5.8 58 175-247 665-725 (997)
113 PRK13288 pyrophosphatase PpaX; 96.2 0.021 4.5E-07 47.1 7.6 68 183-258 138-212 (214)
114 TIGR01456 CECR5 HAD-superfamil 96.2 0.0089 1.9E-07 52.8 5.6 44 15-64 2-53 (321)
115 TIGR01686 FkbH FkbH-like domai 96.2 0.014 3E-07 51.5 6.7 57 12-68 2-65 (320)
116 TIGR01449 PGP_bact 2-phosphogl 96.2 0.0083 1.8E-07 49.3 4.9 64 184-255 142-212 (213)
117 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.2 0.011 2.4E-07 48.0 5.6 31 38-68 83-114 (201)
118 TIGR01261 hisB_Nterm histidino 96.2 0.0044 9.6E-08 49.0 3.1 35 185-222 105-139 (161)
119 TIGR01663 PNK-3'Pase polynucle 96.2 0.014 3E-07 54.8 6.6 52 10-61 165-224 (526)
120 COG0560 SerB Phosphoserine pho 96.1 0.0077 1.7E-07 49.8 4.4 35 34-68 76-111 (212)
121 PRK10517 magnesium-transportin 96.1 0.012 2.5E-07 59.1 6.4 59 173-246 617-677 (902)
122 PRK15122 magnesium-transportin 96.1 0.011 2.4E-07 59.3 6.2 69 172-255 616-688 (903)
123 TIGR01517 ATPase-IIB_Ca plasma 96.1 0.0091 2E-07 60.3 5.6 68 174-256 649-721 (941)
124 PRK13226 phosphoglycolate phos 96.1 0.013 2.9E-07 49.0 5.8 64 185-256 153-224 (229)
125 PRK13582 thrH phosphoserine ph 96.1 0.0092 2E-07 48.7 4.7 32 37-68 70-101 (205)
126 KOG1050 Trehalose-6-phosphate 96.1 0.00018 3.8E-09 69.4 -6.4 86 2-87 178-273 (732)
127 TIGR01647 ATPase-IIIA_H plasma 96.0 0.013 2.8E-07 57.7 6.2 69 173-256 514-586 (755)
128 PRK14010 potassium-transportin 96.0 0.0082 1.8E-07 57.9 4.6 68 174-256 484-555 (673)
129 TIGR01522 ATPase-IIA2_Ca golgi 96.0 0.015 3.2E-07 58.3 6.6 66 176-256 600-670 (884)
130 COG0546 Gph Predicted phosphat 96.0 0.019 4.1E-07 47.7 6.1 68 185-257 147-218 (220)
131 TIGR01488 HAD-SF-IB Haloacid D 95.9 0.0084 1.8E-07 47.6 3.7 32 37-68 75-107 (177)
132 TIGR01652 ATPase-Plipid phosph 95.9 0.0067 1.5E-07 62.0 3.6 64 174-251 748-814 (1057)
133 TIGR01489 DKMTPPase-SF 2,3-dik 95.8 0.018 4E-07 46.1 5.4 38 178-222 144-181 (188)
134 PRK13225 phosphoglycolate phos 95.8 0.014 3.1E-07 50.2 5.0 17 10-26 59-75 (273)
135 PF12689 Acid_PPase: Acid Phos 95.8 0.0091 2E-07 47.5 3.4 56 13-68 3-80 (169)
136 PRK11590 hypothetical protein; 95.8 0.012 2.5E-07 48.7 4.2 43 182-235 161-203 (211)
137 PF03031 NIF: NLI interacting 95.8 0.011 2.5E-07 46.3 3.8 55 14-68 1-69 (159)
138 PF12710 HAD: haloacid dehalog 95.8 0.013 2.8E-07 47.1 4.3 33 184-220 157-192 (192)
139 TIGR01657 P-ATPase-V P-type AT 95.7 0.015 3.3E-07 59.3 5.4 68 174-256 782-851 (1054)
140 PRK08238 hypothetical protein; 95.7 0.026 5.7E-07 52.5 6.4 46 35-81 72-121 (479)
141 TIGR01454 AHBA_synth_RP 3-amin 95.7 0.031 6.7E-07 45.7 6.2 65 184-256 132-203 (205)
142 TIGR02137 HSK-PSP phosphoserin 95.7 0.014 3.1E-07 47.9 4.2 34 35-68 68-101 (203)
143 TIGR03333 salvage_mtnX 2-hydro 95.7 0.016 3.5E-07 47.9 4.5 67 183-261 143-213 (214)
144 PF03767 Acid_phosphat_B: HAD 95.7 0.0037 7.9E-08 52.4 0.5 53 11-63 70-144 (229)
145 TIGR01545 YfhB_g-proteo haloac 95.6 0.013 2.8E-07 48.4 3.7 43 182-235 160-202 (210)
146 PRK05446 imidazole glycerol-ph 95.6 0.016 3.4E-07 51.7 4.4 48 12-59 1-55 (354)
147 TIGR03333 salvage_mtnX 2-hydro 95.5 0.016 3.4E-07 47.9 4.0 34 35-68 70-104 (214)
148 PRK09552 mtnX 2-hydroxy-3-keto 95.5 0.011 2.5E-07 49.0 2.9 15 13-27 3-17 (219)
149 PF00702 Hydrolase: haloacid d 95.4 0.011 2.3E-07 48.4 2.6 32 188-222 183-214 (215)
150 TIGR02245 HAD_IIID1 HAD-superf 95.4 0.037 8.1E-07 45.1 5.5 59 10-68 18-78 (195)
151 COG0474 MgtA Cation transport 95.3 0.026 5.7E-07 56.8 5.4 59 173-246 618-679 (917)
152 PF13242 Hydrolase_like: HAD-h 95.3 0.042 9.1E-07 37.2 4.9 57 187-251 8-74 (75)
153 PRK13478 phosphonoacetaldehyde 95.3 0.06 1.3E-06 46.1 6.9 71 185-263 160-261 (267)
154 COG0637 Predicted phosphatase/ 95.3 0.04 8.6E-07 45.9 5.6 29 191-222 150-178 (221)
155 PRK13222 phosphoglycolate phos 95.3 0.038 8.2E-07 45.7 5.4 16 11-26 4-19 (226)
156 PLN03190 aminophospholipid tra 95.2 0.023 4.9E-07 58.5 4.6 59 176-248 853-914 (1178)
157 TIGR01680 Veg_Stor_Prot vegeta 95.1 0.042 9.1E-07 46.9 5.3 53 11-63 99-174 (275)
158 PRK10826 2-deoxyglucose-6-phos 95.1 0.043 9.4E-07 45.5 5.2 61 184-252 149-215 (222)
159 PRK08942 D,D-heptose 1,7-bisph 94.9 0.085 1.8E-06 42.3 6.3 49 12-60 2-55 (181)
160 TIGR02251 HIF-SF_euk Dullard-l 94.8 0.054 1.2E-06 42.8 4.9 56 13-68 1-75 (162)
161 PRK10725 fructose-1-P/6-phosph 94.8 0.016 3.4E-07 46.6 1.8 36 184-222 143-178 (188)
162 TIGR01449 PGP_bact 2-phosphogl 94.8 0.045 9.9E-07 44.8 4.5 31 37-67 87-118 (213)
163 PLN02940 riboflavin kinase 94.8 0.061 1.3E-06 48.7 5.6 30 38-67 96-126 (382)
164 TIGR01490 HAD-SF-IB-hyp1 HAD-s 94.7 0.033 7.1E-07 45.3 3.6 32 36-67 88-120 (202)
165 COG4359 Uncharacterized conser 94.7 0.061 1.3E-06 42.9 4.6 37 178-222 142-178 (220)
166 TIGR01489 DKMTPPase-SF 2,3-dik 94.6 0.045 9.7E-07 43.8 4.0 16 13-28 1-16 (188)
167 KOG1615 Phosphoserine phosphat 94.5 0.0052 1.1E-07 49.2 -1.6 41 176-222 152-192 (227)
168 PF05152 DUF705: Protein of un 94.4 0.19 4.2E-06 42.9 7.4 73 10-85 119-197 (297)
169 TIGR02250 FCP1_euk FCP1-like p 94.4 0.11 2.4E-06 40.8 5.6 59 10-68 3-91 (156)
170 COG0241 HisB Histidinol phosph 94.3 0.043 9.4E-07 44.0 3.1 45 13-57 5-54 (181)
171 PRK10748 flavin mononucleotide 94.2 0.029 6.4E-07 47.2 2.1 44 184-235 164-209 (238)
172 PRK13288 pyrophosphatase PpaX; 94.1 0.026 5.6E-07 46.5 1.6 15 12-26 2-16 (214)
173 PF06941 NT5C: 5' nucleotidase 94.1 0.079 1.7E-06 43.0 4.3 28 35-62 73-101 (191)
174 PLN02779 haloacid dehalogenase 93.9 0.031 6.8E-07 48.5 1.9 60 185-252 204-268 (286)
175 TIGR02253 CTE7 HAD superfamily 93.9 0.083 1.8E-06 43.6 4.2 59 185-251 152-219 (221)
176 PRK11587 putative phosphatase; 93.8 0.029 6.4E-07 46.4 1.4 60 185-252 140-203 (218)
177 PLN02575 haloacid dehalogenase 93.8 0.12 2.6E-06 46.5 5.4 69 185-261 274-347 (381)
178 PRK14988 GMP/IMP nucleotidase; 93.8 0.12 2.6E-06 43.0 5.1 68 185-260 151-222 (224)
179 KOG0207 Cation transport ATPas 93.7 0.14 3.1E-06 50.2 5.9 69 173-256 765-837 (951)
180 KOG1615 Phosphoserine phosphat 93.7 0.11 2.3E-06 42.0 4.2 39 33-71 86-128 (227)
181 PRK06769 hypothetical protein; 93.7 0.11 2.4E-06 41.5 4.4 64 185-256 95-171 (173)
182 PLN02770 haloacid dehalogenase 93.6 0.035 7.6E-07 47.0 1.6 60 184-251 165-230 (248)
183 PLN03243 haloacid dehalogenase 93.6 0.19 4.2E-06 42.9 6.1 71 185-263 167-241 (260)
184 KOG0202 Ca2+ transporting ATPa 93.6 0.15 3.3E-06 49.6 5.8 60 173-247 657-719 (972)
185 TIGR01422 phosphonatase phosph 93.6 0.17 3.7E-06 42.8 5.8 35 185-222 158-193 (253)
186 PLN02575 haloacid dehalogenase 93.6 0.25 5.3E-06 44.6 6.9 17 10-26 128-144 (381)
187 TIGR02252 DREG-2 REG-2-like, H 93.5 0.05 1.1E-06 44.3 2.2 34 186-222 163-197 (203)
188 PRK11590 hypothetical protein; 93.4 0.042 9.2E-07 45.3 1.7 15 12-26 5-19 (211)
189 TIGR01548 HAD-SF-IA-hyp1 haloa 93.3 0.041 8.9E-07 44.7 1.4 33 185-220 163-195 (197)
190 PRK11587 putative phosphatase; 93.2 0.23 5E-06 41.0 5.7 15 12-26 2-16 (218)
191 TIGR03351 PhnX-like phosphonat 93.2 0.13 2.9E-06 42.4 4.3 64 184-255 146-218 (220)
192 PRK14988 GMP/IMP nucleotidase; 93.1 0.047 1E-06 45.5 1.5 17 10-26 7-23 (224)
193 TIGR03351 PhnX-like phosphonat 93.1 0.061 1.3E-06 44.4 2.1 14 13-26 1-14 (220)
194 TIGR02009 PGMB-YQAB-SF beta-ph 93.0 0.046 1E-06 43.7 1.3 35 185-222 144-178 (185)
195 TIGR01494 ATPase_P-type ATPase 92.8 0.2 4.3E-06 47.0 5.4 55 175-247 388-442 (499)
196 PHA02597 30.2 hypothetical pro 92.8 0.051 1.1E-06 44.1 1.3 61 184-252 131-194 (197)
197 TIGR01544 HAD-SF-IE haloacid d 92.8 0.12 2.6E-06 44.4 3.5 59 10-68 19-90 (277)
198 PF06888 Put_Phosphatase: Puta 92.8 0.36 7.9E-06 40.5 6.3 78 177-260 144-234 (234)
199 TIGR01545 YfhB_g-proteo haloac 92.5 0.1 2.2E-06 43.0 2.8 27 12-44 4-30 (210)
200 TIGR01422 phosphonatase phosph 92.5 0.12 2.5E-06 43.8 3.2 14 13-26 2-15 (253)
201 TIGR01993 Pyr-5-nucltdase pyri 92.5 0.11 2.4E-06 41.6 2.9 35 185-222 143-177 (184)
202 COG0546 Gph Predicted phosphat 92.5 0.07 1.5E-06 44.3 1.7 15 12-26 3-17 (220)
203 PLN02770 haloacid dehalogenase 92.4 0.29 6.2E-06 41.4 5.3 17 10-26 19-35 (248)
204 PLN03243 haloacid dehalogenase 92.3 0.17 3.7E-06 43.3 3.9 18 9-26 20-37 (260)
205 PRK10826 2-deoxyglucose-6-phos 92.2 0.077 1.7E-06 44.0 1.6 17 10-26 4-20 (222)
206 TIGR02253 CTE7 HAD superfamily 92.1 0.31 6.7E-06 40.1 5.2 15 13-27 2-16 (221)
207 PRK13478 phosphonoacetaldehyde 92.1 0.14 3E-06 43.8 3.2 16 12-27 3-18 (267)
208 TIGR02254 YjjG/YfnB HAD superf 92.0 0.093 2E-06 43.3 2.0 63 185-255 154-223 (224)
209 KOG0206 P-type ATPase [General 92.0 0.16 3.4E-06 51.7 3.7 34 183-222 780-813 (1151)
210 PRK13223 phosphoglycolate phos 91.9 0.13 2.8E-06 44.2 2.8 32 10-50 10-41 (272)
211 PLN02779 haloacid dehalogenase 91.7 0.3 6.5E-06 42.3 4.8 22 5-26 31-53 (286)
212 PRK10563 6-phosphogluconate ph 91.5 0.12 2.6E-06 42.7 2.1 41 184-232 143-183 (221)
213 PRK13226 phosphoglycolate phos 91.4 0.083 1.8E-06 44.1 1.0 30 12-50 11-40 (229)
214 TIGR02254 YjjG/YfnB HAD superf 91.1 0.5 1.1E-05 38.8 5.4 15 13-27 1-15 (224)
215 TIGR01990 bPGM beta-phosphoglu 90.9 0.19 4E-06 40.1 2.6 36 184-222 142-177 (185)
216 COG5083 SMP2 Uncharacterized p 90.9 0.13 2.8E-06 46.3 1.8 73 10-84 372-451 (580)
217 PRK09449 dUMP phosphatase; Pro 90.5 0.14 2.9E-06 42.4 1.5 65 186-257 153-223 (224)
218 TIGR01454 AHBA_synth_RP 3-amin 90.5 0.097 2.1E-06 42.7 0.6 11 16-26 1-11 (205)
219 PRK09449 dUMP phosphatase; Pro 90.4 1 2.3E-05 37.1 6.8 15 12-26 2-16 (224)
220 COG3882 FkbH Predicted enzyme 90.3 0.75 1.6E-05 42.3 6.0 63 10-72 219-294 (574)
221 PRK06698 bifunctional 5'-methy 90.3 0.86 1.9E-05 42.3 6.7 65 185-259 387-456 (459)
222 TIGR01493 HAD-SF-IA-v2 Haloaci 90.3 0.21 4.5E-06 39.5 2.3 31 186-219 142-172 (175)
223 TIGR00213 GmhB_yaeD D,D-heptos 90.2 0.53 1.1E-05 37.5 4.6 48 14-61 2-53 (176)
224 TIGR01662 HAD-SF-IIIA HAD-supe 90.2 0.5 1.1E-05 35.5 4.3 36 184-222 86-123 (132)
225 TIGR01549 HAD-SF-IA-v1 haloaci 89.8 0.12 2.7E-06 39.9 0.7 35 184-222 119-153 (154)
226 COG3700 AphA Acid phosphatase 89.8 0.59 1.3E-05 37.2 4.4 64 4-67 53-147 (237)
227 TIGR01428 HAD_type_II 2-haloal 89.4 0.2 4.3E-06 40.6 1.5 42 185-234 150-192 (198)
228 PF06888 Put_Phosphatase: Puta 89.0 0.67 1.5E-05 38.9 4.4 14 15-28 2-15 (234)
229 TIGR01656 Histidinol-ppas hist 88.7 0.47 1E-05 36.6 3.2 36 184-222 102-137 (147)
230 TIGR01990 bPGM beta-phosphoglu 88.4 0.37 8.1E-06 38.3 2.5 27 15-50 1-27 (185)
231 PRK06698 bifunctional 5'-methy 88.3 0.23 5E-06 46.1 1.4 30 13-47 241-270 (459)
232 PF11019 DUF2608: Protein of u 88.1 1.5 3.2E-05 37.3 6.1 41 178-222 157-197 (252)
233 KOG1618 Predicted phosphatase 88.1 0.79 1.7E-05 39.9 4.3 42 10-57 32-78 (389)
234 TIGR01261 hisB_Nterm histidino 87.9 0.41 9E-06 37.7 2.4 48 13-60 1-55 (161)
235 PLN02645 phosphoglycolate phos 87.8 2.1 4.5E-05 37.6 7.0 65 185-257 232-308 (311)
236 TIGR01458 HAD-SF-IIA-hyp3 HAD- 87.7 2.1 4.5E-05 36.5 6.8 64 185-256 181-254 (257)
237 COG4087 Soluble P-type ATPase 87.4 0.83 1.8E-05 34.5 3.5 48 16-69 17-64 (152)
238 TIGR02247 HAD-1A3-hyp Epoxide 86.9 0.36 7.8E-06 39.5 1.7 34 186-222 155-188 (211)
239 PLN02940 riboflavin kinase 86.7 1.2 2.6E-05 40.3 5.0 61 184-252 151-216 (382)
240 PLN02177 glycerol-3-phosphate 86.7 0.75 1.6E-05 43.1 3.7 40 184-235 176-215 (497)
241 COG4996 Predicted phosphatase 86.4 0.94 2E-05 34.2 3.4 50 14-63 1-70 (164)
242 PF13419 HAD_2: Haloacid dehal 85.9 0.67 1.5E-05 36.0 2.7 36 184-222 134-169 (176)
243 COG1011 Predicted hydrolase (H 85.6 0.5 1.1E-05 39.0 1.9 63 187-257 158-227 (229)
244 KOG2116 Protein involved in pl 85.6 1.4 3.1E-05 41.9 4.9 79 10-88 527-616 (738)
245 KOG3120 Predicted haloacid deh 85.4 2.5 5.3E-05 35.0 5.6 80 176-262 156-249 (256)
246 PF12710 HAD: haloacid dehalog 84.9 0.49 1.1E-05 37.8 1.4 11 16-26 1-11 (192)
247 TIGR01428 HAD_type_II 2-haloal 84.8 1.6 3.5E-05 35.2 4.4 14 14-27 2-15 (198)
248 PF00702 Hydrolase: haloacid d 83.9 0.49 1.1E-05 38.4 1.0 48 185-236 153-204 (215)
249 PRK10563 6-phosphogluconate ph 83.7 2.4 5.1E-05 34.9 5.1 15 12-26 3-17 (221)
250 TIGR02009 PGMB-YQAB-SF beta-ph 82.8 1.2 2.5E-05 35.4 2.8 14 13-26 1-14 (185)
251 TIGR01509 HAD-SF-IA-v3 haloaci 82.8 0.55 1.2E-05 37.1 0.9 34 186-222 143-176 (183)
252 KOG0203 Na+/K+ ATPase, alpha s 82.6 1.1 2.3E-05 44.0 2.9 37 205-246 707-746 (1019)
253 KOG2882 p-Nitrophenyl phosphat 82.4 2.3 5E-05 36.8 4.5 51 11-67 20-71 (306)
254 PRK08238 hypothetical protein; 82.4 1.6 3.5E-05 40.8 3.9 43 182-237 126-168 (479)
255 KOG3109 Haloacid dehalogenase- 81.9 1.5 3.2E-05 36.2 3.0 68 187-262 164-233 (244)
256 PLN02811 hydrolase 81.9 2.3 5.1E-05 35.0 4.4 43 185-235 139-185 (220)
257 PRK10444 UMP phosphatase; Prov 81.7 5 0.00011 34.0 6.4 61 184-252 175-245 (248)
258 PRK09456 ?-D-glucose-1-phospha 81.2 0.8 1.7E-05 37.1 1.3 36 184-222 142-177 (199)
259 PRK10748 flavin mononucleotide 81.2 4.3 9.3E-05 34.0 5.8 18 10-27 7-24 (238)
260 TIGR01681 HAD-SF-IIIC HAD-supe 80.2 2.7 5.8E-05 31.6 3.8 34 184-220 90-125 (128)
261 PLN02919 haloacid dehalogenase 80.1 0.84 1.8E-05 46.9 1.3 60 185-252 220-285 (1057)
262 TIGR01686 FkbH FkbH-like domai 79.9 3.8 8.1E-05 36.1 5.2 36 184-222 87-122 (320)
263 KOG0204 Calcium transporting A 78.9 4.1 8.9E-05 40.3 5.3 53 182-246 724-779 (1034)
264 TIGR01509 HAD-SF-IA-v3 haloaci 78.6 3.5 7.6E-05 32.4 4.3 12 16-27 2-13 (183)
265 PHA02597 30.2 hypothetical pro 78.0 3.9 8.4E-05 32.9 4.4 15 13-27 2-16 (197)
266 TIGR01549 HAD-SF-IA-v1 haloaci 77.7 2.3 4.9E-05 32.7 2.9 27 15-50 1-27 (154)
267 COG1011 Predicted hydrolase (H 77.5 9.3 0.0002 31.3 6.7 17 11-27 2-18 (229)
268 COG2503 Predicted secreted aci 77.4 4.4 9.6E-05 34.0 4.5 22 6-27 72-93 (274)
269 TIGR01548 HAD-SF-IA-hyp1 haloa 77.4 1.9 4.2E-05 34.8 2.4 12 15-26 2-13 (197)
270 TIGR01668 YqeG_hyp_ppase HAD s 77.3 7.5 0.00016 30.7 5.8 44 184-235 92-137 (170)
271 COG4483 Uncharacterized protei 76.8 1.7 3.8E-05 28.2 1.5 28 187-221 5-32 (68)
272 COG5663 Uncharacterized conser 76.4 1.7 3.8E-05 34.2 1.8 11 16-26 9-19 (194)
273 PLN02177 glycerol-3-phosphate 75.8 2.1 4.5E-05 40.2 2.5 17 11-27 20-36 (497)
274 TIGR01457 HAD-SF-IIA-hyp2 HAD- 75.1 6.5 0.00014 33.2 5.2 45 184-236 179-225 (249)
275 KOG3040 Predicted sugar phosph 74.8 4.3 9.4E-05 33.3 3.7 51 11-67 5-59 (262)
276 TIGR02252 DREG-2 REG-2-like, H 74.4 3.4 7.4E-05 33.4 3.2 14 14-27 1-14 (203)
277 PRK10725 fructose-1-P/6-phosph 73.8 3.6 7.7E-05 32.7 3.1 15 12-26 4-18 (188)
278 TIGR01691 enolase-ppase 2,3-di 73.5 5.9 0.00013 32.9 4.4 36 184-222 153-188 (220)
279 TIGR01993 Pyr-5-nucltdase pyri 72.2 4.9 0.00011 31.9 3.6 13 15-27 2-14 (184)
280 KOG0208 Cation transport ATPas 71.9 4.3 9.3E-05 40.7 3.6 61 184-256 840-902 (1140)
281 TIGR02247 HAD-1A3-hyp Epoxide 71.3 8.5 0.00018 31.3 4.9 14 13-26 2-15 (211)
282 smart00577 CPDc catalytic doma 70.4 2.1 4.6E-05 33.0 1.0 30 189-221 104-133 (148)
283 KOG3120 Predicted haloacid deh 70.3 4.7 0.0001 33.4 3.0 22 8-29 8-29 (256)
284 TIGR01493 HAD-SF-IA-v2 Haloaci 70.2 3.6 7.9E-05 32.3 2.4 13 15-27 1-13 (175)
285 PRK09456 ?-D-glucose-1-phospha 68.9 5.6 0.00012 32.1 3.3 14 14-27 1-14 (199)
286 TIGR01452 PGP_euk phosphoglyco 68.1 5.9 0.00013 34.1 3.4 41 186-234 205-247 (279)
287 TIGR01511 ATPase-IB1_Cu copper 67.7 10 0.00022 36.3 5.2 58 10-69 382-440 (562)
288 PHA02530 pseT polynucleotide k 67.3 9.2 0.0002 33.1 4.5 36 184-222 252-288 (300)
289 COG4359 Uncharacterized conser 66.9 4.2 9E-05 32.7 2.0 16 12-27 2-17 (220)
290 COG2216 KdpB High-affinity K+ 66.3 2.7 5.8E-05 39.2 0.9 55 176-245 492-548 (681)
291 KOG4549 Magnesium-dependent ph 65.7 15 0.00032 27.7 4.5 53 13-65 18-75 (144)
292 PF06189 5-nucleotidase: 5'-nu 64.5 12 0.00027 31.8 4.4 54 14-67 122-203 (264)
293 PF06014 DUF910: Bacterial pro 64.3 2.7 5.8E-05 27.3 0.4 27 188-221 6-32 (62)
294 TIGR00735 hisF imidazoleglycer 64.1 20 0.00044 30.3 5.9 80 2-81 113-208 (254)
295 PLN02499 glycerol-3-phosphate 63.7 7.3 0.00016 36.4 3.2 27 10-41 5-31 (498)
296 TIGR01685 MDP-1 magnesium-depe 62.1 8 0.00017 30.9 2.8 23 197-222 127-149 (174)
297 TIGR01456 CECR5 HAD-superfamil 60.5 35 0.00075 30.0 6.9 47 205-256 265-320 (321)
298 PLN02919 haloacid dehalogenase 60.1 15 0.00033 38.0 5.1 18 9-26 71-88 (1057)
299 PF04312 DUF460: Protein of un 60.0 11 0.00023 28.8 3.0 61 15-88 45-108 (138)
300 KOG2134 Polynucleotide kinase 59.3 9.3 0.0002 34.4 2.9 48 10-57 72-127 (422)
301 PRK05446 imidazole glycerol-ph 58.3 11 0.00025 33.7 3.4 36 184-222 105-140 (354)
302 COG2179 Predicted hydrolase of 57.3 9.6 0.00021 30.1 2.4 26 185-213 95-120 (175)
303 cd04731 HisF The cyclase subun 55.9 28 0.00062 29.1 5.4 77 2-81 110-202 (243)
304 cd00218 GlcAT-I Beta1,3-glucur 54.8 31 0.00067 28.7 5.1 45 177-225 72-119 (223)
305 PF11019 DUF2608: Protein of u 52.9 23 0.00051 30.0 4.3 27 1-27 6-34 (252)
306 cd04256 AAK_P5CS_ProBA AAK_P5C 52.2 42 0.00091 29.1 5.9 23 5-27 187-209 (284)
307 TIGR01460 HAD-SF-IIA Haloacid 51.8 22 0.00048 29.6 4.0 36 184-222 189-226 (236)
308 KOG0209 P-type ATPase [Inorgan 51.7 13 0.00028 36.9 2.8 27 205-236 808-834 (1160)
309 TIGR01664 DNA-3'-Pase DNA 3'-p 51.3 15 0.00033 28.9 2.8 34 186-222 111-154 (166)
310 smart00775 LNS2 LNS2 domain. T 50.6 31 0.00068 26.9 4.4 37 184-222 102-138 (157)
311 PF03360 Glyco_transf_43: Glyc 49.6 30 0.00065 28.5 4.3 44 178-225 55-101 (207)
312 TIGR01106 ATPase-IIC_X-K sodiu 49.1 22 0.00048 36.5 4.2 34 35-68 568-602 (997)
313 PTZ00489 glutamate 5-kinase; P 48.6 69 0.0015 27.4 6.5 22 5-26 156-177 (264)
314 KOG3085 Predicted hydrolase (H 47.3 25 0.00055 29.6 3.6 42 187-236 172-215 (237)
315 PF09949 DUF2183: Uncharacteri 47.2 48 0.0011 23.8 4.6 35 184-223 50-85 (100)
316 KOG1605 TFIIF-interacting CTD 46.1 13 0.00028 31.8 1.7 17 10-26 86-102 (262)
317 PF13419 HAD_2: Haloacid dehal 45.8 17 0.00037 27.8 2.3 35 34-68 76-111 (176)
318 COG1608 Predicted archaeal kin 45.6 79 0.0017 26.7 6.1 24 4-27 155-178 (252)
319 PF11071 DUF2872: Protein of u 45.5 8.6 0.00019 29.0 0.5 70 184-260 56-140 (141)
320 KOG2914 Predicted haloacid-hal 45.1 15 0.00032 30.6 1.9 29 191-222 159-188 (222)
321 PRK04128 1-(5-phosphoribosyl)- 42.8 39 0.00085 28.2 4.1 48 12-69 43-93 (228)
322 cd04239 AAK_UMPK-like AAK_UMPK 42.0 54 0.0012 27.2 4.9 64 5-68 141-219 (229)
323 TIGR01533 lipo_e_P4 5'-nucleot 41.6 31 0.00068 29.6 3.4 34 177-218 170-203 (266)
324 PRK12314 gamma-glutamyl kinase 41.4 89 0.0019 26.7 6.2 23 5-27 163-185 (266)
325 KOG0205 Plasma membrane H+-tra 41.1 17 0.00037 35.2 1.8 60 173-247 564-625 (942)
326 TIGR00071 hisT_truA pseudourid 41.0 42 0.00091 28.0 4.0 55 14-68 3-58 (227)
327 KOG3085 Predicted hydrolase (H 39.5 37 0.00079 28.6 3.4 17 10-26 4-20 (237)
328 TIGR01512 ATPase-IB2_Cd heavy 39.4 50 0.0011 31.4 4.7 54 13-68 342-397 (536)
329 PRK02083 imidazole glycerol ph 39.3 96 0.0021 26.1 6.1 77 2-81 113-206 (253)
330 PRK14558 pyrH uridylate kinase 39.3 63 0.0014 26.8 4.9 64 5-68 141-219 (231)
331 PRK11009 aphA acid phosphatase 38.3 23 0.0005 29.8 2.1 17 206-222 187-203 (237)
332 COG0548 ArgB Acetylglutamate k 38.1 97 0.0021 26.6 5.7 65 4-68 170-254 (265)
333 TIGR01672 AphA HAD superfamily 37.7 25 0.00055 29.6 2.2 17 206-222 187-203 (237)
334 PRK00358 pyrH uridylate kinase 36.7 78 0.0017 26.2 5.0 64 5-68 143-221 (231)
335 KOG1476 Beta-1,3-glucuronyltra 36.5 90 0.0019 27.4 5.3 47 186-235 165-215 (330)
336 cd04242 AAK_G5K_ProB AAK_G5K_P 36.3 48 0.001 28.0 3.7 23 5-27 151-173 (251)
337 PRK13587 1-(5-phosphoribosyl)- 35.6 86 0.0019 26.2 5.1 18 2-20 115-132 (234)
338 PF01380 SIS: SIS domain SIS d 35.2 86 0.0019 22.8 4.7 32 37-68 66-98 (131)
339 TIGR01459 HAD-SF-IIA-hyp4 HAD- 35.0 56 0.0012 27.3 3.9 35 186-222 198-233 (242)
340 PRK12686 carbamate kinase; Rev 34.8 63 0.0014 28.4 4.3 61 5-68 219-279 (312)
341 TIGR01497 kdpB K+-transporting 34.7 69 0.0015 31.5 4.9 57 10-68 423-480 (675)
342 PRK11033 zntA zinc/cadmium/mer 34.7 72 0.0016 31.7 5.1 58 10-69 545-603 (741)
343 KOG3109 Haloacid dehalogenase- 34.5 51 0.0011 27.5 3.3 32 10-46 12-43 (244)
344 COG1576 Uncharacterized conser 34.3 1.2E+02 0.0027 23.7 5.2 52 5-66 60-112 (155)
345 KOG2961 Predicted hydrolase (H 33.9 1E+02 0.0022 24.2 4.7 37 10-50 40-76 (190)
346 PRK14557 pyrH uridylate kinase 33.5 1.2E+02 0.0026 25.7 5.6 65 5-69 148-228 (247)
347 PRK14556 pyrH uridylate kinase 33.0 91 0.002 26.5 4.8 63 6-68 160-237 (249)
348 TIGR01092 P5CS delta l-pyrroli 32.7 1.1E+02 0.0024 30.4 6.0 63 5-68 176-264 (715)
349 PRK04017 hypothetical protein; 32.3 1.4E+02 0.003 22.7 5.2 45 38-83 7-54 (132)
350 PLN02458 transferase, transfer 31.6 91 0.002 27.6 4.6 34 185-224 190-225 (346)
351 PRK14024 phosphoribosyl isomer 31.0 1.1E+02 0.0023 25.7 5.0 75 2-81 114-199 (241)
352 TIGR03646 YtoQ_fam YtoQ family 30.7 12 0.00027 28.2 -0.6 70 184-260 59-143 (144)
353 PRK14588 tRNA pseudouridine sy 30.4 80 0.0017 27.2 4.1 55 14-68 4-59 (272)
354 PRK14114 1-(5-phosphoribosyl)- 29.8 1.6E+02 0.0035 24.8 5.8 55 5-69 35-93 (241)
355 TIGR02075 pyrH_bact uridylate 28.7 1.1E+02 0.0023 25.5 4.6 64 5-68 144-223 (233)
356 PRK10671 copA copper exporting 28.6 1E+02 0.0023 31.0 5.2 57 10-68 627-684 (834)
357 PRK00748 1-(5-phosphoribosyl)- 28.6 90 0.002 25.7 4.1 55 4-68 34-93 (233)
358 COG0101 TruA Pseudouridylate s 28.5 1E+02 0.0022 26.5 4.4 55 13-67 3-58 (266)
359 TIGR01691 enolase-ppase 2,3-di 28.4 78 0.0017 26.2 3.6 35 34-68 94-129 (220)
360 TIGR01544 HAD-SF-IE haloacid d 28.2 93 0.002 26.9 4.1 37 33-69 119-156 (277)
361 TIGR00007 phosphoribosylformim 28.2 1.5E+02 0.0032 24.4 5.3 56 4-69 32-92 (230)
362 cd04249 AAK_NAGK-NC AAK_NAGK-N 28.1 2E+02 0.0043 24.2 6.2 21 5-26 164-184 (252)
363 KOG2882 p-Nitrophenyl phosphat 28.1 67 0.0015 28.0 3.2 41 187-234 228-269 (306)
364 PF12611 DUF3766: Protein of u 27.9 31 0.00067 17.8 0.7 12 14-25 13-24 (24)
365 COG0637 Predicted phosphatase/ 27.8 63 0.0014 26.6 3.0 14 13-26 2-15 (221)
366 PRK14586 tRNA pseudouridine sy 27.7 91 0.002 26.3 4.0 55 14-68 4-59 (245)
367 cd04253 AAK_UMPK-PyrH-Pf AAK_U 27.7 1.9E+02 0.0041 23.7 5.9 22 5-26 124-145 (221)
368 cd04241 AAK_FomA-like AAK_FomA 27.5 1.6E+02 0.0035 24.7 5.5 22 5-26 156-177 (252)
369 COG0036 Rpe Pentose-5-phosphat 27.3 1.3E+02 0.0028 25.1 4.6 59 5-69 22-82 (220)
370 cd04254 AAK_UMPK-PyrH-Ec UMP k 26.9 1.3E+02 0.0029 24.9 4.8 64 5-68 143-221 (231)
371 PLN02418 delta-1-pyrroline-5-c 26.8 2.3E+02 0.0049 28.2 7.0 63 5-68 184-272 (718)
372 PRK14058 acetylglutamate/acety 26.7 1.7E+02 0.0037 24.9 5.6 23 4-26 176-198 (268)
373 cd04251 AAK_NAGK-UC AAK_NAGK-U 26.7 1.6E+02 0.0034 25.0 5.3 22 5-26 173-194 (257)
374 PF11549 Sec31: Protein transp 26.2 23 0.00049 21.7 0.0 11 210-220 23-33 (51)
375 PLN02811 hydrolase 26.0 99 0.0021 25.2 3.9 31 35-65 78-109 (220)
376 TIGR02244 HAD-IG-Ncltidse HAD 25.6 1E+02 0.0022 27.6 4.0 49 21-69 168-219 (343)
377 cd05008 SIS_GlmS_GlmD_1 SIS (S 25.3 1E+02 0.0023 22.3 3.6 34 36-69 58-92 (126)
378 PF02590 SPOUT_MTase: Predicte 25.3 1.1E+02 0.0023 24.0 3.6 49 5-63 60-110 (155)
379 cd04255 AAK_UMPK-MosAB AAK_UMP 25.1 2.4E+02 0.0053 24.0 6.2 22 5-26 170-191 (262)
380 PF01282 Ribosomal_S24e: Ribos 24.7 1.8E+02 0.0039 20.1 4.3 33 175-210 3-37 (84)
381 TIGR01359 UMP_CMP_kin_fam UMP- 24.5 86 0.0019 24.5 3.2 29 177-212 5-33 (183)
382 PF13207 AAA_17: AAA domain; P 24.4 91 0.002 22.3 3.1 27 178-211 6-32 (121)
383 TIGR02076 pyrH_arch uridylate 24.2 2.6E+02 0.0056 22.9 6.1 22 5-26 124-145 (221)
384 PF08496 Peptidase_S49_N: Pept 24.1 55 0.0012 25.6 1.8 16 11-26 96-111 (155)
385 PF00406 ADK: Adenylate kinase 24.0 65 0.0014 24.5 2.3 28 178-212 3-30 (151)
386 KOG3040 Predicted sugar phosph 23.9 50 0.0011 27.3 1.6 43 184-235 183-227 (262)
387 PRK11133 serB phosphoserine ph 23.5 1.3E+02 0.0029 26.5 4.4 34 34-67 180-214 (322)
388 TIGR02399 salt_tol_Pase glucos 23.3 1.2E+02 0.0026 27.0 3.9 80 8-89 3-97 (389)
389 COG0241 HisB Histidinol phosph 23.1 92 0.002 25.1 3.0 34 186-222 108-141 (181)
390 PF05822 UMPH-1: Pyrimidine 5' 23.0 74 0.0016 27.0 2.5 38 183-222 160-198 (246)
391 KOG2826 Actin-related protein 22.7 65 0.0014 27.0 2.0 18 12-29 30-47 (301)
392 PF13382 Adenine_deam_C: Adeni 22.6 3.1E+02 0.0068 21.8 5.9 59 204-264 66-132 (171)
393 PRK09411 carbamate kinase; Rev 22.3 1.3E+02 0.0029 26.2 4.0 56 5-67 209-264 (297)
394 TIGR02129 hisA_euk phosphoribo 22.0 2.9E+02 0.0064 23.5 5.9 77 2-81 118-210 (253)
395 PRK12352 putative carbamate ki 21.8 1.6E+02 0.0035 26.0 4.5 59 5-66 223-281 (316)
396 PF08235 LNS2: LNS2 (Lipin/Ned 21.7 1.3E+02 0.0028 23.6 3.5 39 182-222 100-138 (157)
397 TIGR00090 iojap_ybeB iojap-lik 21.6 75 0.0016 22.7 2.0 17 52-68 31-47 (99)
398 PRK13586 1-(5-phosphoribosyl)- 21.5 2.9E+02 0.0063 23.1 5.8 54 5-69 35-93 (232)
399 TIGR00746 arcC carbamate kinas 21.3 1.8E+02 0.0038 25.6 4.6 59 5-66 218-276 (310)
400 cd04237 AAK_NAGS-ABP AAK_NAGS- 21.3 1.5E+02 0.0032 25.6 4.1 58 4-68 188-245 (280)
401 cd02115 AAK Amino Acid Kinases 21.1 1.6E+02 0.0036 24.3 4.4 22 5-26 159-180 (248)
402 PRK12434 tRNA pseudouridine sy 21.0 1.6E+02 0.0034 24.9 4.2 55 14-68 4-60 (245)
403 COG0106 HisA Phosphoribosylfor 21.0 1.5E+02 0.0033 25.0 4.0 28 41-68 180-210 (241)
404 PF04007 DUF354: Protein of un 20.8 1.1E+02 0.0024 27.2 3.3 43 38-81 14-59 (335)
405 PRK01033 imidazole glycerol ph 20.8 2.8E+02 0.006 23.5 5.7 77 2-81 113-205 (258)
406 cd04732 HisA HisA. Phosphorib 20.7 2E+02 0.0042 23.7 4.7 78 2-81 112-199 (234)
407 TIGR00761 argB acetylglutamate 20.4 1.6E+02 0.0036 24.2 4.2 58 4-68 162-219 (231)
408 PRK14531 adenylate kinase; Pro 20.3 1.2E+02 0.0027 23.9 3.3 30 176-212 7-36 (183)
409 cd00006 PTS_IIA_man PTS_IIA, P 20.2 2.6E+02 0.0057 20.4 4.9 14 52-65 84-97 (122)
410 PRK00103 rRNA large subunit me 20.2 3E+02 0.0064 21.5 5.3 40 12-61 67-108 (157)
No 1
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=1.6e-43 Score=311.17 Aligned_cols=264 Identities=61% Similarity=1.078 Sum_probs=222.4
Q ss_pred ChhhhhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhcCccCceEeccCc
Q 023990 1 MFHEITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLAELYYAGSHG 80 (274)
Q Consensus 1 ~~~~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~~~~~~~li~~nG 80 (274)
+|++|.....++++++|+||||||.+...+|+...++++++++|++|.+...++|+|||+...+.++++.+.++++|+||
T Consensus 107 ~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~~~l~laGsHG 186 (384)
T PLN02580 107 SFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGLTELYYAGSHG 186 (384)
T ss_pred HHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCCCCccEEEeCC
Confidence 58999988899999999999999999998999999999999999999999889999999999999999988899999999
Q ss_pred ceEeCCCCCcc---cc--------ccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhH
Q 023990 81 MDIKGPTKGLK---YN--------QKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKW 149 (274)
Q Consensus 81 ~~i~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 149 (274)
+++..+.+... |. ...+|...++..+|.+.++++.+.+..+.+.++|.++|++.+++.||||++++..+
T Consensus 187 ~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~ 266 (384)
T PLN02580 187 MDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNW 266 (384)
T ss_pred ceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHH
Confidence 99987643210 00 01123333444556666677888777778889999999999999999999877656
Q ss_pred HHHHHHHHHHHhhCCCcEEEecCeEEEEeC-CCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCc
Q 023990 150 NDLAQKVKEVVNEYPQLNWRQGRMVMEIRP-KIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQG 228 (274)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~iei~p-~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g 228 (274)
+.+.+.+...+..++++.+..|..++||+| . ++|||.|+++|++.++++..+...+++|||+.||++||+.++....|
T Consensus 267 ~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~-g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G 345 (384)
T PLN02580 267 PLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVI-DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRG 345 (384)
T ss_pred HHHHHHHHHHHHhCCceEEEeCCeEEEEecCC-CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCc
Confidence 667777777777777788889999999999 7 99999999999999998754211359999999999999998754448
Q ss_pred eEEEecCCCCCccceEEeCCHHHHHHHHHHHHhhhcc
Q 023990 229 FGILVSKFPKKTSASYSLREPDEVMDFLQKLVRWKRD 265 (274)
Q Consensus 229 ~~v~v~na~~~~~A~~~~~~~~~v~~~L~~l~~~~~~ 265 (274)
++|+|+|+...+.|+|.++++++|..+|+.|+.+...
T Consensus 346 ~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~~ 382 (384)
T PLN02580 346 YGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKKS 382 (384)
T ss_pred eEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhhc
Confidence 9999999888899999999999999999999988764
No 2
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=3.6e-42 Score=300.03 Aligned_cols=264 Identities=72% Similarity=1.224 Sum_probs=221.6
Q ss_pred ChhhhhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhcCccCceEeccCc
Q 023990 1 MFHEITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLAELYYAGSHG 80 (274)
Q Consensus 1 ~~~~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~~~~~~~li~~nG 80 (274)
+|++|+..+..++.+||+||||||++...+|+...++++++++|++|++...|+|+|||++..+.++++++.++++|+||
T Consensus 99 ~~~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hG 178 (366)
T PLN03017 99 MFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKLAELYYAGSHG 178 (366)
T ss_pred HHHHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcccCceEEEcCC
Confidence 48999999999999999999999998776666678999999999999965799999999999999988777789999999
Q ss_pred ceEeCCCCCcc-ccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhHHHHHHHHHHH
Q 023990 81 MDIKGPTKGLK-YNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEV 159 (274)
Q Consensus 81 ~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (274)
+++..+++... +....++..+++..+|.+.++++...+..+.+.++|.++|++.+++.+|||++++..+.++...+..+
T Consensus 179 a~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~v 258 (366)
T PLN03017 179 MDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSV 258 (366)
T ss_pred cEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 99998754311 11111222333444566677778777877788899999999999999999999876667777888888
Q ss_pred HhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC
Q 023990 160 VNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK 239 (274)
Q Consensus 160 ~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~ 239 (274)
++.++++.+..|+..+|+.|.+++|||.|+++|++.+++...+.+.++++||+..|+.||+.++..++|++|.||..+..
T Consensus 259 l~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~ 338 (366)
T PLN03017 259 LKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKD 338 (366)
T ss_pred HHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCC
Confidence 88888889999999999999438999999999999998764323479999999999999999986656899999976667
Q ss_pred ccceEEeCCHHHHHHHHHHHHhhhc
Q 023990 240 TSASYSLREPDEVMDFLQKLVRWKR 264 (274)
Q Consensus 240 ~~A~~~~~~~~~v~~~L~~l~~~~~ 264 (274)
+.|.|.++++++|..+|+.|+++..
T Consensus 339 T~A~y~L~dp~eV~~fL~~L~~~~~ 363 (366)
T PLN03017 339 TDASYSLQDPSEVMDFLARLVEWKQ 363 (366)
T ss_pred CcceEeCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999998764
No 3
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=1.2e-41 Score=295.94 Aligned_cols=267 Identities=70% Similarity=1.200 Sum_probs=223.6
Q ss_pred ChhhhhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhcCccCceEeccCc
Q 023990 1 MFHEITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLAELYYAGSHG 80 (274)
Q Consensus 1 ~~~~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~~~~~~~li~~nG 80 (274)
+|++|.....+++.++|+||||||++...+|+...++++++++|++|.+...++|+|||+...+..++++++++++++||
T Consensus 86 ~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG 165 (354)
T PLN02151 86 MFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVKLTELYYAGSHG 165 (354)
T ss_pred HHHHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcCCccceEEEeCC
Confidence 48899999999999999999999999888888889999999999999977899999999999999999988899999999
Q ss_pred ceEeCCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhHHHHHHHHHHHH
Q 023990 81 MDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVV 160 (274)
Q Consensus 81 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (274)
+++..+++...|....++...++..+|.+.++++...+..+...++|.++|++.+++.||||++++..+.++.+.+..++
T Consensus 166 ~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~ 245 (354)
T PLN02151 166 MDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVL 245 (354)
T ss_pred ceeecCCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHH
Confidence 99987754322322112222334445666667777777777778999999999999999999998765666777788888
Q ss_pred hhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCCc
Q 023990 161 NEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKT 240 (274)
Q Consensus 161 ~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~~ 240 (274)
..++++.+..|+..+|+.|.+++|||.|+++|++.+++.....++++++||+..|+.||+.++..+.|+||.|+..+..+
T Consensus 246 ~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k~T 325 (354)
T PLN02151 246 KNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAKET 325 (354)
T ss_pred hhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCCCC
Confidence 78888899999999999993389999999999999887643223699999999999999999765558999999766678
Q ss_pred cceEEeCCHHHHHHHHHHHHhhhccCc
Q 023990 241 SASYSLREPDEVMDFLQKLVRWKRDSA 267 (274)
Q Consensus 241 ~A~~~~~~~~~v~~~L~~l~~~~~~~~ 267 (274)
.|+|.++++++|..+|+.|+.+...++
T Consensus 326 ~A~y~L~dp~eV~~~L~~L~~~~~~~~ 352 (354)
T PLN02151 326 NASYSLQEPDEVMEFLERLVEWKQLRC 352 (354)
T ss_pred cceEeCCCHHHHHHHHHHHHHhhhccc
Confidence 999999999999999999998776543
No 4
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=6e-38 Score=268.24 Aligned_cols=233 Identities=24% Similarity=0.408 Sum_probs=187.1
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc--CCEEEEcCCCHhhHHhhcCccCceEeccCcceEeCCCCC
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTKG 89 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~--~~v~i~TGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~ 89 (274)
+.++|++||||||++...+|+...++++++++|++|+++ ..|+|+|||++..+.++++...++++++||++++..++.
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGK 92 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCC
Confidence 468999999999999777777788999999999999984 489999999999999988755567999999999876543
Q ss_pred ccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhHHHHHHHHH-HHHhhCCCcEE
Q 023990 90 LKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVK-EVVNEYPQLNW 168 (274)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 168 (274)
. +. .... .++...+...+.++.++.++.++|.++..+.+||+..+.. .+....+. .+.+.++.+.+
T Consensus 93 ~-~~-------~~l~---~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i~~~~~~~~~ 159 (266)
T PRK10187 93 T-HI-------VHLP---DAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRITQIWPQLAL 159 (266)
T ss_pred e-ee-------ccCC---hhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHHHhhCCceEE
Confidence 1 11 0111 1344566666666667788999999999999999877432 23333333 33344554667
Q ss_pred EecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeCC
Q 023990 169 RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLRE 248 (274)
Q Consensus 169 ~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~~~A~~~~~~ 248 (274)
.+++.++||+|+ ++|||.|++++++.+|++.. ++++|||+.||++||++++.. .|++|+|||+. +.|++++++
T Consensus 160 ~~g~~~lEi~p~-g~~Kg~al~~ll~~~~~~~~---~v~~~GD~~nD~~mf~~~~~~-~g~~vavg~a~--~~A~~~l~~ 232 (266)
T PRK10187 160 QPGKCVVEIKPR-GTNKGEAIAAFMQEAPFAGR---TPVFVGDDLTDEAGFAVVNRL-GGISVKVGTGA--TQASWRLAG 232 (266)
T ss_pred eCCCEEEEeeCC-CCCHHHHHHHHHHhcCCCCC---eEEEEcCCccHHHHHHHHHhc-CCeEEEECCCC--CcCeEeCCC
Confidence 788999999999 99999999999999998875 799999999999999999643 38999999874 569999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 023990 249 PDEVMDFLQKLVRWKR 264 (274)
Q Consensus 249 ~~~v~~~L~~l~~~~~ 264 (274)
+++|..||..|+..++
T Consensus 233 ~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 233 VPDVWSWLEMITTAQQ 248 (266)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999997666
No 5
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=5.1e-35 Score=247.73 Aligned_cols=235 Identities=29% Similarity=0.417 Sum_probs=178.3
Q ss_pred CCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC--CEEEEcCCCHhhHHhhcCccCceEeccCcceEeCCCC
Q 023990 11 GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTK 88 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~--~v~i~TGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~ 88 (274)
+++++|++||||||++...+|+...++++++++|++|.++. .|+|+|||+...+...+..++++++++||++++.++.
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~g~ 80 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDNGS 80 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeecCEEEecCCC
Confidence 47899999999999998777777889999999999999984 5789999999888877777888999999999987332
Q ss_pred CccccccCceeccCC-CCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCCh-hhHHH-HHHHHHHHHhhCCC
Q 023990 89 GLKYNQKSKVVNFQP-ASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDE-KKWND-LAQKVKEVVNEYPQ 165 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~ 165 (274)
... |..... ...|.+...++.+. ....+|+++|+|+.++.||||.+++ +.... ..+.+..+... .+
T Consensus 81 ~~~------~~~~~~~~~~~~~~~~~l~~~----~~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~~-~~ 149 (244)
T TIGR00685 81 CQD------WVNLTEKIPSWKVRANELREE----ITTRPGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILSF-TD 149 (244)
T ss_pred cce------eeechhhhhhHHHHHHHHHHH----HhcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhcC-CC
Confidence 211 111110 11222223333333 2334899999999999999998843 22111 22223333332 25
Q ss_pred cEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCC---CceEEEecCCCCCccc
Q 023990 166 LNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKRE---QGFGILVSKFPKKTSA 242 (274)
Q Consensus 166 ~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~---~g~~v~v~na~~~~~A 242 (274)
+.+..+..++|+.|. ++|||.+++.+++.+++... .+++|||+.||++||+.++... .+++|.|+.+..++.|
T Consensus 150 ~~v~~g~~~~e~~p~-~~~Kg~a~~~~~~~~~~~~~---~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 150 LEVMDGKAVVELKPR-FVNKGEIVKRLLWHQPGSGI---SPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred EEEEECCeEEEEeeC-CCCHHHHHHHHHHhcccCCC---ceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCc
Confidence 778889999999999 99999999999999998765 7999999999999999993221 2689999755667889
Q ss_pred eEEeCCHHHHHHHHHHHH
Q 023990 243 SYSLREPDEVMDFLQKLV 260 (274)
Q Consensus 243 ~~~~~~~~~v~~~L~~l~ 260 (274)
+++++++++|..+|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999998875
No 6
>PRK10976 putative hydrolase; Provisional
Probab=100.00 E-value=3.9e-35 Score=251.80 Aligned_cols=224 Identities=17% Similarity=0.218 Sum_probs=147.3
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC-c-cCceEeccCcceEeCCCCC
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPTKG 89 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~li~~nG~~i~~~~~~ 89 (274)
.|+|++||||||++. +..++++++++|++|++++ .|+|||||++..+.+++. + ...++||+||+.|+..++.
T Consensus 2 ikli~~DlDGTLl~~-----~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 2 YQVVASDLDGTLLSP-----DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred ceEEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 589999999999983 4579999999999999995 899999999999887653 2 2346899999999975444
Q ss_pred ccccccCceeccCCCCcchhhHHHHHHHHHhh------hcCCCceEEEecC-----------ceEEEE-ccCCChhh---
Q 023990 90 LKYNQKSKVVNFQPASEFLPLIDKVYKVLVEK------TKSTPGARVENNK-----------FCISVH-FRCVDEKK--- 148 (274)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~e~~~-----------~~~~~~-~~~~~~~~--- 148 (274)
.++.. ..+ .+.+.++.+.+... .....+.+..... ...... ........
T Consensus 77 ~i~~~--------~l~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~k 146 (266)
T PRK10976 77 LIFSH--------NLD--RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSK 146 (266)
T ss_pred Eehhh--------cCC--HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceE
Confidence 32210 111 12233444433210 0001111111000 000000 00000000
Q ss_pred ------HHHHHHHHHHHH-hhCC-CcEE-EecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHH
Q 023990 149 ------WNDLAQKVKEVV-NEYP-QLNW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAF 219 (274)
Q Consensus 149 ------~~~~~~~~~~~~-~~~~-~~~~-~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~ 219 (274)
-.+..+.+.+.+ +.+. .+.+ .+++.++||+|+ ++|||+|+++|++++|++++ ++++|||+.||++||
T Consensus 147 i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~lgi~~~---~viafGD~~NDi~Ml 222 (266)
T PRK10976 147 VFFTCDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAG-GVSKGHALEAVAKKLGYSLK---DCIAFGDGMNDAEML 222 (266)
T ss_pred EEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcC-CCChHHHHHHHHHHcCCCHH---HeEEEcCCcccHHHH
Confidence 001112222222 2232 3554 356689999999 99999999999999999986 899999999999999
Q ss_pred HHHHhCCCceEEEecCCCCC--ccce--EEe--CCHHHHHHHHHHHH
Q 023990 220 KILRKREQGFGILVSKFPKK--TSAS--YSL--REPDEVMDFLQKLV 260 (274)
Q Consensus 220 ~~~~~~~~g~~v~v~na~~~--~~A~--~~~--~~~~~v~~~L~~l~ 260 (274)
+.+ |+||||+||.++ .+|+ +++ ++.+||+.+|++++
T Consensus 223 ~~a-----g~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 223 SMA-----GKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred HHc-----CCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 999 999999999764 6665 666 46789999999886
No 7
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=2e-34 Score=277.83 Aligned_cols=239 Identities=30% Similarity=0.435 Sum_probs=189.4
Q ss_pred hhhhhhhc-cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc-C-CEEEEcCCCHhhHHhhcCccCceEecc
Q 023990 2 FHEITEAS-KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-F-PTAIVTGRCRDKVYDFVKLAELYYAGS 78 (274)
Q Consensus 2 ~~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~-~-~v~i~TGR~~~~l~~~~~~~~~~li~~ 78 (274)
++.+.++| .+++|+|++|+||||++....|....++++++++|++|+++ + .|+++|||+...+.++++..++++|++
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liae 559 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAE 559 (726)
T ss_pred HHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEe
Confidence 36788889 78899999999999998765556677899999999999995 4 899999999999999987556789999
Q ss_pred CcceEeCCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhH----HHHHH
Q 023990 79 HGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKW----NDLAQ 154 (274)
Q Consensus 79 nG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~----~~~~~ 154 (274)
||++++.+++. |.. . ..... .|.+.+.+.+..+.++.++.+++.++.++.+||+..+++.. .++.+
T Consensus 560 nG~~i~~~~~~--w~~----~-~~~~~---~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~ 629 (726)
T PRK14501 560 HGAWSRAPGGE--WQL----L-EPVAT---EWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELIL 629 (726)
T ss_pred CCEEEeCCCCc--eEE----C-CCcch---hHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHH
Confidence 99999876543 211 0 11122 34455555666666778999999999999999998765432 23344
Q ss_pred HHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEec
Q 023990 155 KVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS 234 (274)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~ 234 (274)
.++..+... .+.+.+++.++||+|+ ++|||.|++++++ +++.+ ++++|||+.||++||+.++. .|++|+||
T Consensus 630 ~l~~~~~~~-~~~v~~g~~~veV~p~-~vnKG~al~~ll~--~~~~d---~vl~~GD~~nDe~Mf~~~~~--~~~~v~vG 700 (726)
T PRK14501 630 ALSSLLSNA-PLEVLRGNKVVEVRPA-GVNKGRAVRRLLE--AGPYD---FVLAIGDDTTDEDMFRALPE--TAITVKVG 700 (726)
T ss_pred HHHHHhcCC-CeEEEECCeEEEEEEC-CCCHHHHHHHHHh--cCCCC---EEEEECCCCChHHHHHhccc--CceEEEEC
Confidence 454544432 4677789999999999 9999999999999 45443 89999999999999999742 37999999
Q ss_pred CCCCCccceEEeCCHHHHHHHHHHHHh
Q 023990 235 KFPKKTSASYSLREPDEVMDFLQKLVR 261 (274)
Q Consensus 235 na~~~~~A~~~~~~~~~v~~~L~~l~~ 261 (274)
|+ ++.|+++++++++|+.+|+.|+.
T Consensus 701 ~~--~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 701 PG--ESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CC--CCcceEeCCCHHHHHHHHHHHhc
Confidence 84 57899999999999999999874
No 8
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-34 Score=241.56 Aligned_cols=247 Identities=27% Similarity=0.436 Sum_probs=203.2
Q ss_pred hhhhhhhc-cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC--CEEEEcCCCHhhHHhhcCccCceEecc
Q 023990 2 FHEITEAS-KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCRDKVYDFVKLAELYYAGS 78 (274)
Q Consensus 2 ~~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~--~v~i~TGR~~~~l~~~~~~~~~~li~~ 78 (274)
++.+.+.+ +.++++|++|+||||+....+|....++++++++|++|..++ .++|+|||+..++..++++|+++++|+
T Consensus 6 ~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~ae 85 (266)
T COG1877 6 SNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAE 85 (266)
T ss_pred hhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEe
Confidence 56777888 999999999999999999888888899999999999999995 599999999999999999999999999
Q ss_pred CcceEeCCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhHHHHHHHHHH
Q 023990 79 HGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKE 158 (274)
Q Consensus 79 nG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (274)
||++++.++|.. |. . .....+..|++++.+.++++++++||+++|.+..++.||||++++.......-.. .
T Consensus 86 hGa~~r~~~g~~-~~------~-~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~-~ 156 (266)
T COG1877 86 HGAEVRDPNGKW-WI------N-LAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAE-A 156 (266)
T ss_pred cceEEecCCCCe-eE------e-cCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHH-H
Confidence 999998887663 22 1 1233446777899999999999999999999999999999998765322111111 1
Q ss_pred HHhhCCC-cEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC
Q 023990 159 VVNEYPQ-LNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP 237 (274)
Q Consensus 159 ~~~~~~~-~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~ 237 (274)
.....+. ++++.|+..+|+.|. ++|||.+++++++..+.... .+++.||+..|+.||++++..+ +++|-++-.
T Consensus 157 ~~~~~~~~~~v~~gk~vVEvrp~-~~~KG~a~~~i~~~~~~~~~---~~~~aGDD~TDE~~F~~v~~~~-~~~v~v~~~- 230 (266)
T COG1877 157 ATLINELKLRVTPGKMVVELRPP-GVSKGAAIKYIMDELPFDGR---FPIFAGDDLTDEDAFAAVNKLD-SITVKVGVG- 230 (266)
T ss_pred HhccccccEEEEeCceEEEEeeC-CcchHHHHHHHHhcCCCCCC---cceecCCCCccHHHHHhhccCC-CceEEecCC-
Confidence 1112233 788999999999999 99999999999999887653 7999999999999999997543 677777643
Q ss_pred CCccceEEeCCHHHHHHHHHHHHhhhc
Q 023990 238 KKTSASYSLREPDEVMDFLQKLVRWKR 264 (274)
Q Consensus 238 ~~~~A~~~~~~~~~v~~~L~~l~~~~~ 264 (274)
.+.|++..........++.++...+.
T Consensus 231 -~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 231 -STQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred -cccccccccccHHHHHHHHHHHHHhh
Confidence 56788888888888888888887664
No 9
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=100.00 E-value=6.1e-35 Score=251.06 Aligned_cols=225 Identities=19% Similarity=0.198 Sum_probs=148.7
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---Ccc--CceEeccCcceEeC
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLA--ELYYAGSHGMDIKG 85 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~--~~~li~~nG~~i~~ 85 (274)
+.|+|++||||||++. +..++++++++|++|++++ .|++||||++..+.+++ ++. ..++||+||+.|+.
T Consensus 2 ~~kli~~DlDGTLl~~-----~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~ 76 (270)
T PRK10513 2 AIKLIAIDMDGTLLLP-----DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQK 76 (270)
T ss_pred ceEEEEEecCCcCcCC-----CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEE
Confidence 3689999999999983 4579999999999999995 89999999999988765 332 24799999999996
Q ss_pred C-CCCccccccCceeccCCCCcchhhHHHHHHHHHhhh-----cCCCceEEEecCce-----------EEEEcc---CCC
Q 023990 86 P-TKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKT-----KSTPGARVENNKFC-----------ISVHFR---CVD 145 (274)
Q Consensus 86 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~e~~~~~-----------~~~~~~---~~~ 145 (274)
. ++..++.. ..+ .+.+.++.+.+...- ....+.+....... ....+. ...
T Consensus 77 ~~~~~~i~~~--------~l~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (270)
T PRK10513 77 AADGETVAQT--------ALS--YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMD 146 (270)
T ss_pred CCCCCEEEec--------CCC--HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhcc
Confidence 4 33322210 111 122334444433210 00111111110000 000000 000
Q ss_pred h-hhH--------HHHHHHHHHHH-hhC-CCcEE-EecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCc
Q 023990 146 E-KKW--------NDLAQKVKEVV-NEY-PQLNW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDT 213 (274)
Q Consensus 146 ~-~~~--------~~~~~~~~~~~-~~~-~~~~~-~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ 213 (274)
+ ... .+..+.+.+.+ ..+ ..+.+ .+++.++||+|+ |+|||+|+++|++++|++++ ++++|||+.
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~~gi~~~---~v~afGD~~ 222 (270)
T PRK10513 147 PNLQFPKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDK-RVNKGTGVKSLAEHLGIKPE---EVMAIGDQE 222 (270)
T ss_pred ccCCceEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCC-CCChHHHHHHHHHHhCCCHH---HEEEECCch
Confidence 0 000 01111121111 222 23444 356789999999 99999999999999999986 899999999
Q ss_pred CCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC--CHHHHHHHHHHHH
Q 023990 214 TDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFLQKLV 260 (274)
Q Consensus 214 ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~v~~~L~~l~ 260 (274)
||++||+.+ |+||||+||.+ +.+|++++. +.+||+.+|++++
T Consensus 223 NDi~Ml~~a-----g~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 223 NDIAMIEYA-----GVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred hhHHHHHhC-----CceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 999999998 99999999976 478999984 5678999999876
No 10
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=100.00 E-value=5.6e-35 Score=251.59 Aligned_cols=225 Identities=16% Similarity=0.188 Sum_probs=147.5
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC-c-cCceEeccCcceEeCCCCC
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPTKG 89 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~li~~nG~~i~~~~~~ 89 (274)
.|+|++||||||++. +..++++++++|++|++++ .|++||||++..+.+++. + ...++||+||+.|+..++.
T Consensus 2 ~kli~~DlDGTLl~~-----~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 2 ARLAAFDMDGTLLMP-----DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred ccEEEEeCCCcCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 589999999999983 4579999999999999995 899999999999888753 2 2346899999999975544
Q ss_pred ccccccCceeccCCCCcchhhHHHHHHHHHhh-----hcCCCceEEEecC-----------ceEEE-EccCCChhh----
Q 023990 90 LKYNQKSKVVNFQPASEFLPLIDKVYKVLVEK-----TKSTPGARVENNK-----------FCISV-HFRCVDEKK---- 148 (274)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~e~~~-----------~~~~~-~~~~~~~~~---- 148 (274)
.++.. ..+ .+.+.++.+.+... .....+.+..... ..... .+.......
T Consensus 77 ~l~~~--------~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki 146 (272)
T PRK15126 77 LLHRQ--------DLP--ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKI 146 (272)
T ss_pred EEEee--------cCC--HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEE
Confidence 32211 111 12333444333221 0000111110000 00000 000000000
Q ss_pred ----HHHHHHHHHHHHh-hCC-CcEEE-ecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHH
Q 023990 149 ----WNDLAQKVKEVVN-EYP-QLNWR-QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 221 (274)
Q Consensus 149 ----~~~~~~~~~~~~~-~~~-~~~~~-~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~ 221 (274)
-.+..+.+.+.+. .++ .+.+. ++..++||+|+ ++|||+|+++|++++|++.+ ++++|||+.||++||+.
T Consensus 147 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~-g~sKg~al~~l~~~~gi~~~---~v~afGD~~NDi~Ml~~ 222 (272)
T PRK15126 147 CFCGDHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPV-GCNKGAALAVLSQHLGLSLA---DCMAFGDAMNDREMLGS 222 (272)
T ss_pred EEECCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecC-CCChHHHHHHHHHHhCCCHH---HeEEecCCHHHHHHHHH
Confidence 0111222333232 222 34443 55679999999 99999999999999999986 89999999999999999
Q ss_pred HHhCCCceEEEecCCCCC--ccceE--Ee--CCHHHHHHHHHHHHh
Q 023990 222 LRKREQGFGILVSKFPKK--TSASY--SL--REPDEVMDFLQKLVR 261 (274)
Q Consensus 222 ~~~~~~g~~v~v~na~~~--~~A~~--~~--~~~~~v~~~L~~l~~ 261 (274)
+ |+||||+||.++ .+|++ ++ ++.+||+.+|++++.
T Consensus 223 a-----g~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 223 V-----GRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred c-----CCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 9 999999999754 56765 55 367899999999984
No 11
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=100.00 E-value=1e-34 Score=248.88 Aligned_cols=223 Identities=22% Similarity=0.287 Sum_probs=150.5
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccCceEeccCcceEeCCC
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPT 87 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~ 87 (274)
.+|+|++|+||||++. +..++++++++|+++++++ .|+|||||++..+.+++ +... ++||+||++|+.+
T Consensus 2 ~~kli~~DlDGTLl~~-----~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~-~~I~~NGa~i~~~- 74 (264)
T COG0561 2 MIKLLAFDLDGTLLDS-----NKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG-PLITFNGALIYNG- 74 (264)
T ss_pred CeeEEEEcCCCCccCC-----CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc-cEEEeCCeEEecC-
Confidence 5799999999999993 4569999999999999995 89999999999998876 3333 7999999999998
Q ss_pred CCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCc--------eE---------EEEccCC---Ch-
Q 023990 88 KGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKF--------CI---------SVHFRCV---DE- 146 (274)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~--------~~---------~~~~~~~---~~- 146 (274)
+...+. ...+ ...+..+...+.... .....+...... .. .+..... ..
T Consensus 75 ~~~i~~--------~~l~--~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (264)
T COG0561 75 GELLFQ--------KPLS--REDVEELLELLEDFQ-GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDN 143 (264)
T ss_pred CcEEee--------ecCC--HHHHHHHHHHHHhcc-CceEEEEeccceeeccCCCcccccccccccccccccchhhcCcc
Confidence 443221 1111 234455555543210 011111110000 00 0000000 00
Q ss_pred -----hhHHHHHHHHHHHH-hhCC--CcEEEec-CeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHH
Q 023990 147 -----KKWNDLAQKVKEVV-NEYP--QLNWRQG-RMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDED 217 (274)
Q Consensus 147 -----~~~~~~~~~~~~~~-~~~~--~~~~~~~-~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~ 217 (274)
....+....+...+ +.++ .+.+.++ ..++||+|+ |+|||+|+++|++++|++.+ ++++||||.||++
T Consensus 144 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~-g~~K~~al~~l~~~lgi~~~---~v~afGD~~ND~~ 219 (264)
T COG0561 144 KIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPK-GVSKGYALQRLAKLLGIKLE---EVIAFGDSTNDIE 219 (264)
T ss_pred eEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecC-CCchHHHHHHHHHHhCCCHH---HeEEeCCccccHH
Confidence 00012222232222 3333 2445544 445999999 99999999999999999875 7999999999999
Q ss_pred HHHHHHhCCCceEEEecCCCC--CccceEEe--CCHHHHHHHHHHHHh
Q 023990 218 AFKILRKREQGFGILVSKFPK--KTSASYSL--REPDEVMDFLQKLVR 261 (274)
Q Consensus 218 M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~~~~v~~~L~~l~~ 261 (274)
||+++ |+||+|+||.+ +..|++++ ++.+||+.+|++++.
T Consensus 220 Ml~~a-----g~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 220 MLEVA-----GLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred HHHhc-----CeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 99998 99999999964 46888775 467899999998863
No 12
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=2.3e-33 Score=270.90 Aligned_cols=244 Identities=24% Similarity=0.349 Sum_probs=191.4
Q ss_pred hhhhhhc-cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc--CCEEEEcCCCHhhHHhhcCc-cCceEecc
Q 023990 3 HEITEAS-KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDFVKL-AELYYAGS 78 (274)
Q Consensus 3 ~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~--~~v~i~TGR~~~~l~~~~~~-~~~~li~~ 78 (274)
++|.++| .+++++|++|+||||++... ....++++++++|++|.+. +.|+|+|||++..+.++++. +.++++|+
T Consensus 585 ~~i~~~y~~~~~rlI~LDyDGTLlp~~~--~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaE 662 (854)
T PLN02205 585 EHIVSAYKRTTTRAILLDYDGTLMPQAS--IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAE 662 (854)
T ss_pred HHHHHHHHhhcCeEEEEecCCcccCCcc--ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEe
Confidence 5688889 88899999999999998542 1456889999999999766 47999999999999999965 56899999
Q ss_pred CcceEeCCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhh----HHHHHH
Q 023990 79 HGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKK----WNDLAQ 154 (274)
Q Consensus 79 nG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~----~~~~~~ 154 (274)
||++++.+++.. |. ....... ..|.+.+...+..|.++.+|+++|.++.++.|||+.++++. ..++..
T Consensus 663 HG~~ir~~~~~~-w~------~~~~~~~-~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~ 734 (854)
T PLN02205 663 HGYFLRLKRDVE-WE------TCVPVAD-CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLD 734 (854)
T ss_pred CCEEEEeCCCce-ee------ecchhhh-HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHH
Confidence 999998775433 32 1111111 12334455556667888999999999999999999986643 234556
Q ss_pred HHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHH---cCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCC----
Q 023990 155 KVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLEC---LGFADCSNVFPVYIGDDTTDEDAFKILRKREQ---- 227 (274)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~---~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~---- 227 (274)
+++..+...+ +.+.+|+.++||.|+ ++|||.|++.|++. +|++++ ++++|||+.||++||++++....
T Consensus 735 ~l~~~l~~~~-~~v~~G~~vvEV~p~-gvnKG~Al~~Ll~~~~~~g~~~d---~vl~~GDD~nDedMF~~~~~~~~g~~~ 809 (854)
T PLN02205 735 HLESVLANEP-VTVKSGQNIVEVKPQ-GVSKGLVAKRLLSIMQERGMLPD---FVLCIGDDRSDEDMFEVITSSMAGPSI 809 (854)
T ss_pred HHHHHHhcCc-eEEEECCcEEEEEeC-CCCHHHHHHHHHHHHHhcCCCcc---cEEEEcCCccHHHHHHHhhhhccCCcc
Confidence 6666665543 667889999999999 99999999999864 577654 89999999999999999963211
Q ss_pred -----ceEEEecCCCCCccceEEeCCHHHHHHHHHHHHhhh
Q 023990 228 -----GFGILVSKFPKKTSASYSLREPDEVMDFLQKLVRWK 263 (274)
Q Consensus 228 -----g~~v~v~na~~~~~A~~~~~~~~~v~~~L~~l~~~~ 263 (274)
+++|.||. ..+.|+|.++++++|..+|+.|++..
T Consensus 810 ~~~~~~~~v~VG~--~~S~A~y~L~d~~eV~~lL~~L~~~~ 848 (854)
T PLN02205 810 APRAEVFACTVGQ--KPSKAKYYLDDTAEIVRLMQGLASVS 848 (854)
T ss_pred cccccceeEEECC--CCccCeEecCCHHHHHHHHHHHHhcc
Confidence 38888985 45789999999999999999998643
No 13
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=2e-34 Score=242.90 Aligned_cols=224 Identities=41% Similarity=0.655 Sum_probs=147.8
Q ss_pred EEecCccccCCccCCCcCCCChHHHHHHHHHhhcC--CEEEEcCCCHhhHHhhcCccCceEeccCcceEeCCCCCccccc
Q 023990 17 FLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTKGLKYNQ 94 (274)
Q Consensus 17 ~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~--~v~i~TGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~~ 94 (274)
|+|+||||.++...|....++++++++|++|.+.+ .|+|+|||+...+..+.++++++++|+||+++..+++.. |.
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~-~~- 78 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSE-WT- 78 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-E-EE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccc-cc-
Confidence 69999999999888888899999999999999995 699999999999777888899999999999999987653 21
Q ss_pred cCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChh----hHHHHHHHHHHHHhhCCCcEEEe
Q 023990 95 KSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEK----KWNDLAQKVKEVVNEYPQLNWRQ 170 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 170 (274)
. ........|++.+.+.++.+.++++|+++|+++.++.||||.+++. .+.++.+.+.+.+...+++.+..
T Consensus 79 -----~-~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~ 152 (235)
T PF02358_consen 79 -----N-LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVP 152 (235)
T ss_dssp -------TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE
T ss_pred -----c-cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEE
Confidence 1 1122224677888888888888899999999999999999998766 35567777877777666789999
Q ss_pred cCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhC-CCceEEEecCCC---CCccceEEe
Q 023990 171 GRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKR-EQGFGILVSKFP---KKTSASYSL 246 (274)
Q Consensus 171 ~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~-~~g~~v~v~na~---~~~~A~~~~ 246 (274)
++.++||.|. +++||.|+++|++.++......+.++++||+..|++||++++.. ..|+++.|+... ..+.|+|.+
T Consensus 153 g~~~vEvrp~-~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 153 GKKVVEVRPP-GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp -SSEEEEE-T-T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES---------------
T ss_pred CCCEEEEEeC-CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccc
Confidence 9999999999 99999999999999886521224899999999999999999764 237899998754 347899988
Q ss_pred CCH
Q 023990 247 REP 249 (274)
Q Consensus 247 ~~~ 249 (274)
+++
T Consensus 232 ~~p 234 (235)
T PF02358_consen 232 DDP 234 (235)
T ss_dssp ---
T ss_pred ccC
Confidence 775
No 14
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=100.00 E-value=3.5e-33 Score=240.22 Aligned_cols=228 Identities=14% Similarity=0.188 Sum_probs=149.3
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccCceEeccCcceEeC
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKG 85 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~~i~~ 85 (274)
-..+++|++||||||++. +..++++++++|++|++++ .|++||||++..+.+++ +++..++||+||+.|+.
T Consensus 4 ~~~~~lI~~DlDGTLL~~-----~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~ 78 (271)
T PRK03669 4 LQDPLLIFTDLDGTLLDS-----HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQL 78 (271)
T ss_pred cCCCeEEEEeCccCCcCC-----CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEe
Confidence 346899999999999982 3468899999999999995 99999999999998775 44334799999999997
Q ss_pred CCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEE---------------------e-cCceEEEEccC
Q 023990 86 PTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVE---------------------N-NKFCISVHFRC 143 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e---------------------~-~~~~~~~~~~~ 143 (274)
+.+..... . ........+ .+.+..+.+.+.... ...-.... . ......+.+..
T Consensus 79 ~~~~~~~~-~-~~~~~~~l~--~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (271)
T PRK03669 79 DEQWQDHP-D-FPRIISGIS--HGEIRQVLNTLREKE-GFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRD 153 (271)
T ss_pred cCcccCCC-C-ceEeecCCC--HHHHHHHHHHHHHhc-CCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecC
Confidence 64321000 0 000000011 123344444332210 00000000 0 00000011111
Q ss_pred CChhhHHHHHHHHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCc---CCCCCeeEEEEcCCcCCHHHHH
Q 023990 144 VDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGF---ADCSNVFPVYIGDDTTDEDAFK 220 (274)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~---~~~~~~~vi~~GDs~ND~~M~~ 220 (274)
++ .....+.+.+... ++.+.++..++||+|+ ++|||+|+++|++++|+ +.+ ++++||||.||++||+
T Consensus 154 -~~----~~~~~~~~~l~~~-~~~~~~~~~~iEi~~~-g~sKg~al~~l~~~lgi~~~~~~---~viafGDs~NDi~Ml~ 223 (271)
T PRK03669 154 -SD----ERMAQFTARLAEL-GLQFVQGARFWHVLDA-SAGKDQAANWLIATYQQLSGTRP---TTLGLGDGPNDAPLLD 223 (271)
T ss_pred -CH----HHHHHHHHHHHHC-CCEEEecCeeEEEecC-CCCHHHHHHHHHHHHHhhcCCCc---eEEEEcCCHHHHHHHH
Confidence 11 1222333333322 4565555578999999 99999999999999999 775 8999999999999999
Q ss_pred HHHhCCCceEEEecCCCCC--------ccceEEeC--CHHHHHHHHHHHHhh
Q 023990 221 ILRKREQGFGILVSKFPKK--------TSASYSLR--EPDEVMDFLQKLVRW 262 (274)
Q Consensus 221 ~~~~~~~g~~v~v~na~~~--------~~A~~~~~--~~~~v~~~L~~l~~~ 262 (274)
++ |+||+|+|+... ..|.++++ +.+|+.+.|++++..
T Consensus 224 ~a-----g~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 224 VM-----DYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred hC-----CEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 99 999999976521 25778886 567999999998854
No 15
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=3.4e-33 Score=234.63 Aligned_cols=214 Identities=21% Similarity=0.234 Sum_probs=146.1
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccCceEeccCcceEeCCC-
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPT- 87 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~- 87 (274)
.|+|++||||||++. +..++++++++|++|++.+ .|++||||++..+.+++ +++ .++|++||+.++.+.
T Consensus 3 ~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~-~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 3 IKAIAIDIDGTITDK-----DRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS-GPVIAENGGVISVGFD 76 (230)
T ss_pred eeEEEEecCCCcCCC-----CCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC-CcEEEecCeEEEEcCC
Confidence 589999999999983 4469999999999999995 89999999999988764 443 468999999999763
Q ss_pred CCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEe-cCceE--EEEccCCChhhHHHHHHHHHHHHhhCC
Q 023990 88 KGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVEN-NKFCI--SVHFRCVDEKKWNDLAQKVKEVVNEYP 164 (274)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (274)
+..++. ... +...++.+.+..........+... ..... ........ .+.+.+.++.+.
T Consensus 77 ~~~~~~--------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~ 137 (230)
T PRK01158 77 GKRIFL--------GDI----EECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP-------VEEVRELLEELG 137 (230)
T ss_pred CCEEEE--------cch----HHHHHHHHHHHHhccccceeeecCCcccccceeeeccccc-------HHHHHHHHHHcC
Confidence 222111 011 112233333322111100001000 00000 01111111 122333344332
Q ss_pred -CcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--Ccc
Q 023990 165 -QLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTS 241 (274)
Q Consensus 165 -~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~ 241 (274)
.+.+..+..++|++|+ ++|||.|++++++++|++++ ++++|||+.||++||+.+ |++++|+||.+ +..
T Consensus 138 ~~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~vk~~ 208 (230)
T PRK01158 138 LDLEIVDSGFAIHIKSP-GVNKGTGLKKLAELMGIDPE---EVAAIGDSENDLEMFEVA-----GFGVAVANADEELKEA 208 (230)
T ss_pred CcEEEEecceEEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHHHHHhc-----CceEEecCccHHHHHh
Confidence 3445555578999999 99999999999999999876 899999999999999998 99999999975 468
Q ss_pred ceEEeC--CHHHHHHHHHHHH
Q 023990 242 ASYSLR--EPDEVMDFLQKLV 260 (274)
Q Consensus 242 A~~~~~--~~~~v~~~L~~l~ 260 (274)
|++++. +.+||+.+|++++
T Consensus 209 a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 209 ADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred cceEecCCCcChHHHHHHHHh
Confidence 999884 5678999998875
No 16
>PLN02887 hydrolase family protein
Probab=100.00 E-value=5.2e-33 Score=257.95 Aligned_cols=230 Identities=20% Similarity=0.212 Sum_probs=151.5
Q ss_pred hhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccC--------ce
Q 023990 7 EASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAE--------LY 74 (274)
Q Consensus 7 ~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~--------~~ 74 (274)
..|..+.|+|++||||||++ .+..++++++++|++|++++ .|+|||||++..+.+++ ++.. .+
T Consensus 302 ~~~~~~iKLIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p 376 (580)
T PLN02887 302 RFYKPKFSYIFCDMDGTLLN-----SKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSP 376 (580)
T ss_pred hhhccCccEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeeccc
Confidence 45667789999999999998 34579999999999999995 89999999999988765 3221 24
Q ss_pred EeccCcceEeCCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhh-----cCCCceEEEecCceEE-EE--cc----
Q 023990 75 YAGSHGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKT-----KSTPGARVENNKFCIS-VH--FR---- 142 (274)
Q Consensus 75 li~~nG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~e~~~~~~~-~~--~~---- 142 (274)
+|++||+.|+..++..++.. ... .+.+.++.+.+...- ...++.+......... .+ +.
T Consensus 377 ~I~~NGA~I~d~~g~~I~~~-------~L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~ 446 (580)
T PLN02887 377 GVFLQGLLVYGRQGREIYRS-------NLD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKA 446 (580)
T ss_pred EEeecCeEEEECCCcEEEEE-------eCC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccc
Confidence 67789999986554432211 011 123344444432210 0011111110000000 00 00
Q ss_pred -CCC-hhh---------------HHHHHHHHHHHH-hhCC-CcEE-EecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCC
Q 023990 143 -CVD-EKK---------------WNDLAQKVKEVV-NEYP-QLNW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCS 202 (274)
Q Consensus 143 -~~~-~~~---------------~~~~~~~~~~~~-~~~~-~~~~-~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~ 202 (274)
... ... .....+.+...+ +.+. .+.+ .++..++||+|+ |+|||+||++|++++|++.+
T Consensus 447 ~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~-gvSKG~ALk~L~e~lGI~~e- 524 (580)
T PLN02887 447 EIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPP-GTSKGNGVKMLLNHLGVSPD- 524 (580)
T ss_pred cccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecC-CCCHHHHHHHHHHHcCCCHH-
Confidence 000 000 001111222222 2222 3454 356789999999 99999999999999999986
Q ss_pred CeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC--CHHHHHHHHHHHH
Q 023990 203 NVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFLQKLV 260 (274)
Q Consensus 203 ~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~v~~~L~~l~ 260 (274)
++++|||+.||++||+++ |+||||+||.+ +.+|++++. +.+||+.+|++++
T Consensus 525 --eviAFGDs~NDIeMLe~A-----G~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 525 --EIMAIGDGENDIEMLQLA-----SLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred --HEEEEecchhhHHHHHHC-----CCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 899999999999999999 99999999975 478999974 5678999999874
No 17
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=8.6e-31 Score=252.87 Aligned_cols=250 Identities=17% Similarity=0.241 Sum_probs=190.5
Q ss_pred hhhhhhc-cCCcEEEEEecCccccCCcc---CCCcCCCChHHHHHHHHHhhc--CCEEEEcCCCHhhHHhhcCccCceEe
Q 023990 3 HEITEAS-KGKQIVMFLDYDGTLSPIVE---NPDRAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDFVKLAELYYA 76 (274)
Q Consensus 3 ~~~~~~~-~~~~~li~~DlDGTL~~~~~---~~~~~~i~~~~~~al~~L~~~--~~v~i~TGR~~~~l~~~~~~~~~~li 76 (274)
+.+.+.| .+++++|++|+||||.+... .|....++++++++|++|.+. +.|+|+|||+...+.++++.++++++
T Consensus 496 ~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~ 575 (797)
T PLN03063 496 QDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLA 575 (797)
T ss_pred HHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEE
Confidence 5677888 77889999999999998644 234567899999999999998 37999999999999999987778999
Q ss_pred ccCcceEeCCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhH----HHH
Q 023990 77 GSHGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKW----NDL 152 (274)
Q Consensus 77 ~~nG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~----~~~ 152 (274)
|+||+++..+++. |.. ....... ..|.+.+...++.+.+++||+++|.|+.++.||||.++++.. .++
T Consensus 576 aeHG~~~r~~~~~--w~~-----~~~~~~~-~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el 647 (797)
T PLN03063 576 AENGMFLRHTSGE--WVT-----TMPEHMN-LDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDM 647 (797)
T ss_pred EeCCEEEecCCCc--eee-----ccccccC-hhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHH
Confidence 9999999866432 210 0001101 245666777788888999999999999999999999865431 223
Q ss_pred HHHHHH-HHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCc---CCCCCeeEEEEcCCc-CCHHHHHHHHhCC-
Q 023990 153 AQKVKE-VVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGF---ADCSNVFPVYIGDDT-TDEDAFKILRKRE- 226 (274)
Q Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~---~~~~~~~vi~~GDs~-ND~~M~~~~~~~~- 226 (274)
.+++.+ .+. .+++.+..|+..+||.|. ++|||.|++.+++.+.. .....++++|+||+. .|+.||++++...
T Consensus 648 ~~~l~~~~~~-~~~~~v~~Gk~vvEvrp~-gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~ 725 (797)
T PLN03063 648 LQHLWAGPIS-NASVDVVRGQKSVEVHAI-GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEIL 725 (797)
T ss_pred HHHHHHhhcc-CCCcEEEECCeEEEEEcC-CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhcccccc
Confidence 333322 122 235889999999999999 99999999999987621 111234999999985 5999999885310
Q ss_pred ---------------------------CceEEEecCCCCCccceEEeCCHHHHHHHHHHHHhhhc
Q 023990 227 ---------------------------QGFGILVSKFPKKTSASYSLREPDEVMDFLQKLVRWKR 264 (274)
Q Consensus 227 ---------------------------~g~~v~v~na~~~~~A~~~~~~~~~v~~~L~~l~~~~~ 264 (274)
+-|+|.||. ..+.|+|+++++++|..+|..|...+.
T Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~--~~s~A~y~l~~~~eV~~lL~~l~~~~~ 788 (797)
T PLN03063 726 SKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQ--ARTKARYVLDSSNDVVSLLHKLAVANT 788 (797)
T ss_pred ccccccccccccccccccccccccccCceEEEEECC--CCccCeecCCCHHHHHHHHHHHhccCc
Confidence 016788885 468999999999999999999986443
No 18
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=100.00 E-value=2.1e-31 Score=229.16 Aligned_cols=223 Identities=22% Similarity=0.224 Sum_probs=145.7
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC-c-cCceEeccCcceEeCCC-C
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPT-K 88 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~li~~nG~~i~~~~-~ 88 (274)
.|+|++||||||++. +..++++++++|++|++++ .|++||||++..+.+++. + ...++||+||+.++... +
T Consensus 3 ~kli~~DlDGTLl~~-----~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 3 YRVIALDLDGTLLTP-----KKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred ccEEEEeCCCceECC-----CCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 689999999999983 4579999999999999995 899999999999887652 2 23469999999999753 3
Q ss_pred CccccccCceeccCCCCcchhhHHHHHHHHHhhh-----cCCCceEEEecC--------ceEEE------EccCCChh--
Q 023990 89 GLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKT-----KSTPGARVENNK--------FCISV------HFRCVDEK-- 147 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~e~~~--------~~~~~------~~~~~~~~-- 147 (274)
..++.. ..+ .+.+.++.+.+.... ....+.+..... +.... .+....+.
T Consensus 78 ~~l~~~--------~l~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (272)
T PRK10530 78 KVLEAD--------PLP--VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQ 147 (272)
T ss_pred EEEEec--------CCC--HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHH
Confidence 322210 111 123344444443210 000011110000 00000 00000000
Q ss_pred ----------------hHHHHHHHHHHHHhhCCCcEE-EecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEc
Q 023990 148 ----------------KWNDLAQKVKEVVNEYPQLNW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIG 210 (274)
Q Consensus 148 ----------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~G 210 (274)
......+..+.+.+.+ ++.+ .++..++|++|+ ++|||.|++++++++|++++ ++++||
T Consensus 148 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~~gi~~~---e~i~~G 222 (272)
T PRK10530 148 AARQVNAIWKFALTHEDLPQLQHFAKHVEHEL-GLECEWSWHDQVDIARK-GNSKGKRLTQWVEAQGWSMK---NVVAFG 222 (272)
T ss_pred HHhhcCCcEEEEEecCCHHHHHHHHHHHhhhc-CceEEEecCceEEEecC-CCChHHHHHHHHHHcCCCHH---HeEEeC
Confidence 0001111122222333 3443 344568999999 99999999999999999886 899999
Q ss_pred CCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC--CHHHHHHHHHHHH
Q 023990 211 DDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFLQKLV 260 (274)
Q Consensus 211 Ds~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~v~~~L~~l~ 260 (274)
|+.||++||+.+ |+||+|+|+.+ +..|++++. +.+||+.+|++++
T Consensus 223 D~~NDi~m~~~a-----g~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 223 DNFNDISMLEAA-----GLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CChhhHHHHHhc-----CceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 999999999998 89999999864 367898874 5678999999875
No 19
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.98 E-value=1.4e-31 Score=226.72 Aligned_cols=211 Identities=27% Similarity=0.421 Sum_probs=143.8
Q ss_pred EEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcCc--cCceEeccCcceEeCCCCCccc
Q 023990 16 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVKL--AELYYAGSHGMDIKGPTKGLKY 92 (274)
Q Consensus 16 i~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~~~~~~ 92 (274)
|++||||||++. +..++++++++|++|++++ .|++||||++..+.++++. ...++|++||+.+....+..++
T Consensus 1 i~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~ 75 (254)
T PF08282_consen 1 IFSDLDGTLLNS-----DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILY 75 (254)
T ss_dssp EEEECCTTTCST-----TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEE
T ss_pred cEEEECCceecC-----CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccch
Confidence 799999999993 4569999999999999995 8999999999999887642 1258999999999545444322
Q ss_pred cccCceeccCCCCcchhhHHHHHHHHHhhh-----cCCCceEEEecC-----------------------------ceEE
Q 023990 93 NQKSKVVNFQPASEFLPLIDKVYKVLVEKT-----KSTPGARVENNK-----------------------------FCIS 138 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~e~~~-----------------------------~~~~ 138 (274)
.. ..+ .+.+..+.+.+.... ......+..... ..+.
T Consensus 76 ~~--------~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~ 145 (254)
T PF08282_consen 76 EK--------PID--SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKIL 145 (254)
T ss_dssp EE--------SB---HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEE
T ss_pred hh--------hee--ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeee
Confidence 10 111 234455555554321 001111111110 0000
Q ss_pred EEccCCChhhHHHHHHHHHHHHhhCCCc-E-EEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCH
Q 023990 139 VHFRCVDEKKWNDLAQKVKEVVNEYPQL-N-WRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDE 216 (274)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~ 216 (274)
+. .+...+..+.+.+.+ .+++. . +.++..++||+|+ ++|||+|+++|++.+|++++ ++++||||.||+
T Consensus 146 --~~-~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~lei~~~-~vsK~~ai~~l~~~~~i~~~---~~~~~GD~~ND~ 215 (254)
T PF08282_consen 146 --FF-PDPEDLEQLREELKK---KFPNLIDVVRSSPYFLEITPK-GVSKGSAIKYLLEYLGISPE---DIIAFGDSENDI 215 (254)
T ss_dssp --EE-SCHHHHHHHHHHHHH---HHTTTEEEEEEETTEEEEEET-TSSHHHHHHHHHHHHTTSGG---GEEEEESSGGGH
T ss_pred --cc-ccchhhhhhhhhhcc---ccCcceeEEEecccceEEeeC-CCCHHHHHHHHhhhcccccc---eeEEeecccccH
Confidence 00 011112223333333 33332 3 4567899999999 99999999999999999886 899999999999
Q ss_pred HHHHHHHhCCCceEEEecCCCC--CccceEEeCC--HHHHHHHH
Q 023990 217 DAFKILRKREQGFGILVSKFPK--KTSASYSLRE--PDEVMDFL 256 (274)
Q Consensus 217 ~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--~~~v~~~L 256 (274)
+||+.+ |+||+|+||.+ +.+|++++.+ .+||+++|
T Consensus 216 ~Ml~~~-----~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 216 EMLELA-----GYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp HHHHHS-----SEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred hHHhhc-----CeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 999999 99999999976 4789998853 36888775
No 20
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.97 E-value=1.3e-29 Score=244.12 Aligned_cols=212 Identities=17% Similarity=0.290 Sum_probs=164.0
Q ss_pred hhhhhhc-cCCcEEEEEecCccccCCccCCC---------cCCCChHHHHHHHHHhhc--CCEEEEcCCCHhhHHhhcCc
Q 023990 3 HEITEAS-KGKQIVMFLDYDGTLSPIVENPD---------RAFMSGKMRRAVRQLAKY--FPTAIVTGRCRDKVYDFVKL 70 (274)
Q Consensus 3 ~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~---------~~~i~~~~~~al~~L~~~--~~v~i~TGR~~~~l~~~~~~ 70 (274)
+.+...| .+++++||+|+||||++....|+ ...++++++++|++|.+. +.|+|+|||+...+..+++.
T Consensus 580 ~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~ 659 (934)
T PLN03064 580 EDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGE 659 (934)
T ss_pred HHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCC
Confidence 5677888 88889999999999999776665 456889999999999998 47999999999999999987
Q ss_pred cCceEeccCcceEeCCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhh--
Q 023990 71 AELYYAGSHGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKK-- 148 (274)
Q Consensus 71 ~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-- 148 (274)
.+++++|+||+++..+++. |.. ....... ..|.+.+...++.+.+++||+++|.|+.++.||||.++++.
T Consensus 660 ~~L~LaAEHG~~~R~~~~~--w~~-----~~~~~~~-~~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~ 731 (934)
T PLN03064 660 FDMWLAAENGMFLRHTKGE--WMT-----TMPEHLN-MDWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGR 731 (934)
T ss_pred CCceEEeeCCeEEecCCCc--cee-----ccccccc-hHHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHH
Confidence 6789999999999876532 320 0111101 24667777788888899999999999999999999986543
Q ss_pred --HHHHHHHHHH-HHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCC---CCCeeEEEEcCCcC-CHHHHHH
Q 023990 149 --WNDLAQKVKE-VVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFAD---CSNVFPVYIGDDTT-DEDAFKI 221 (274)
Q Consensus 149 --~~~~~~~~~~-~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~---~~~~~vi~~GDs~N-D~~M~~~ 221 (274)
+.++.+++.. .+.. +++.+..|+..+||.|. ++|||.|++.|++.+.-+. ...++|+|+||+.. |+.||++
T Consensus 732 ~qA~el~~~L~~~~~~~-~~v~V~~Gk~VVEVrP~-gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~ 809 (934)
T PLN03064 732 LQARDMLQHLWTGPISN-AAVDVVQGSRSVEVRPV-GVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTF 809 (934)
T ss_pred HHHHHHHHHHHhhhccC-CCcEEEeCCeEEEEEcC-CCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHH
Confidence 2233333321 2222 35788999999999999 9999999999999753111 12359999999875 9999999
Q ss_pred HHh
Q 023990 222 LRK 224 (274)
Q Consensus 222 ~~~ 224 (274)
+..
T Consensus 810 l~~ 812 (934)
T PLN03064 810 FEP 812 (934)
T ss_pred Hhc
Confidence 853
No 21
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.97 E-value=5.9e-31 Score=218.96 Aligned_cols=208 Identities=23% Similarity=0.292 Sum_probs=138.6
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC-c-cCceEeccCcceEeCCCCC
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPTKG 89 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~li~~nG~~i~~~~~~ 89 (274)
.|+|++||||||++ .+..++++++++|++|++.+ .|++||||++..+.+++. + ...++|++||+.++..++.
T Consensus 1 ik~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~ 75 (215)
T TIGR01487 1 IKLVAIDIDGTLTE-----PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKED 75 (215)
T ss_pred CcEEEEecCCCcCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCc
Confidence 47999999999998 34579999999999999995 899999999999888753 2 1236899999999986533
Q ss_pred ccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhHHHHHHHHHHHHhhCCCcEEE
Q 023990 90 LKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYPQLNWR 169 (274)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (274)
..+. .....+. ....... .+......... ......+.. .... .+.+...++.. ++...
T Consensus 76 ~~~~--------~~~~~~~--~~~~~~~--~~~~~~~~~~~--~~~~~~~~~---~~~~----~~~~~~~l~~~-~~~~~ 133 (215)
T TIGR01487 76 IFLA--------NMEEEWF--LDEEKKK--RFPRDRLSNEY--PRASLVIMR---EGKD----VDEVREIIKER-GLNLV 133 (215)
T ss_pred EEEe--------cccchhh--HHHhhhh--hhhhhhccccc--ceeEEEEec---CCcc----HHHHHHHHHhC-CeEEE
Confidence 2111 0111110 0000000 00000000000 001111111 1111 12233333332 45555
Q ss_pred ecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeC
Q 023990 170 QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSASYSLR 247 (274)
Q Consensus 170 ~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~--~~A~~~~~ 247 (274)
.+..++||+|. +++||.|++++++.+|++.+ ++++||||.||++||+.+ |++++|+|+.+. ..|++++.
T Consensus 134 ~~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~iGDs~ND~~ml~~a-----g~~vam~na~~~~k~~A~~v~~ 204 (215)
T TIGR01487 134 DSGFAIHIMKK-GVDKGVGVEKLKELLGIKPE---EVAAIGDSENDIDLFRVV-----GFKVAVANADDQLKEIADYVTS 204 (215)
T ss_pred ecCceEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHhC-----CCeEEcCCccHHHHHhCCEEcC
Confidence 45678999999 99999999999999999875 799999999999999998 999999998754 67999985
Q ss_pred --CHHHHHHHH
Q 023990 248 --EPDEVMDFL 256 (274)
Q Consensus 248 --~~~~v~~~L 256 (274)
+.+||+++|
T Consensus 205 ~~~~~Gv~~~l 215 (215)
T TIGR01487 205 NPYGEGVVEVL 215 (215)
T ss_pred CCCCchhhhhC
Confidence 456787654
No 22
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.97 E-value=1.6e-30 Score=222.04 Aligned_cols=218 Identities=22% Similarity=0.289 Sum_probs=142.7
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC-c-cCceEeccCcceEeCCCCCcc
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPTKGLK 91 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~li~~nG~~i~~~~~~~~ 91 (274)
+|++||||||++. +..++++++++|++|++++ .|++||||++..+.+++. + ...++||+||+.++..++..+
T Consensus 1 li~~DlDGTLl~~-----~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i 75 (256)
T TIGR00099 1 LIFIDLDGTLLND-----DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEIL 75 (256)
T ss_pred CEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEE
Confidence 5899999999983 4579999999999999995 899999999999887763 2 223799999999998754322
Q ss_pred ccccCceeccCCCCcchhhHHHHHHHHHhhh-----cCCCceEEEecCce-EE----EEc------cCC---Chhh----
Q 023990 92 YNQKSKVVNFQPASEFLPLIDKVYKVLVEKT-----KSTPGARVENNKFC-IS----VHF------RCV---DEKK---- 148 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~e~~~~~-~~----~~~------~~~---~~~~---- 148 (274)
+.. ..+ .+.+.++.+.+.... ....+.+....... .. ... ... ....
T Consensus 76 ~~~--------~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T TIGR00099 76 YKK--------PLD--LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKIL 145 (256)
T ss_pred eec--------CCC--HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEE
Confidence 210 111 133445555443311 01111111110000 00 000 000 0000
Q ss_pred ----HHHHHHHHHHHHh--hC-CCcEE-EecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHH
Q 023990 149 ----WNDLAQKVKEVVN--EY-PQLNW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFK 220 (274)
Q Consensus 149 ----~~~~~~~~~~~~~--~~-~~~~~-~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~ 220 (274)
-....+.+.+.+. .+ +.+.+ .++..++||+|+ ++|||.|++++++.++++++ ++++||||.||++||+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~-~~~K~~~i~~~~~~~~~~~~---~~~~~GD~~nD~~m~~ 221 (256)
T TIGR00099 146 LLFLDPEDLDLLIEALNKLELEENVSVVSSGPYSIEITAK-GVSKGSALQSLAEALGISLE---DVIAFGDGMNDIEMLE 221 (256)
T ss_pred EEECCHHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCC-CCChHHHHHHHHHHcCCCHH---HEEEeCCcHHhHHHHH
Confidence 0111222333332 12 23554 466789999999 99999999999999999876 8999999999999999
Q ss_pred HHHhCCCceEEEecCCCC--CccceEEeC--CHHHHHHHH
Q 023990 221 ILRKREQGFGILVSKFPK--KTSASYSLR--EPDEVMDFL 256 (274)
Q Consensus 221 ~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~v~~~L 256 (274)
.+ |++++|+|+.+ +..|++++. +.+||+.+|
T Consensus 222 ~~-----~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 222 AA-----GYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred hC-----CceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 98 89999999865 367888875 456787654
No 23
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.97 E-value=5.9e-31 Score=220.27 Aligned_cols=211 Identities=20% Similarity=0.226 Sum_probs=138.0
Q ss_pred EEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC-c-cCceEeccCcceEeCCCCC-cc
Q 023990 16 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK-L-AELYYAGSHGMDIKGPTKG-LK 91 (274)
Q Consensus 16 i~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~-~-~~~~li~~nG~~i~~~~~~-~~ 91 (274)
|+|||||||++. +..++++++++|++|++.+ .|++||||++..+.+++. + ...++|++||+.|+..++. ..
T Consensus 1 i~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 75 (225)
T TIGR01482 1 IASDIDGTLTDP-----NRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDI 75 (225)
T ss_pred CeEeccCccCCC-----CcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceE
Confidence 689999999983 4479999999999999995 899999999998887652 2 2347999999999986532 11
Q ss_pred ccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhHHHHHHHHHHHHhhCC-CcEEEe
Q 023990 92 YNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYP-QLNWRQ 170 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 170 (274)
+. . .....| ..................+. .........+ ..+.. .+..+++.+. .+.+.+
T Consensus 76 ~~------~-~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~ 136 (225)
T TIGR01482 76 FL------A-YLEEEW---FLDIVIAKTFPFSRLKVQYP-RRASLVKMRY-GIDVD-------TVREIIKELGLNLVAVD 136 (225)
T ss_pred Ee------c-ccCHHH---HHHHHHhcccchhhhccccc-cccceEEEee-cCCHH-------HHHHHHHhcCceEEEec
Confidence 11 1 011111 11111100000000000000 0000111111 11111 1222333332 123335
Q ss_pred cCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC-
Q 023990 171 GRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR- 247 (274)
Q Consensus 171 ~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~~- 247 (274)
+..++||+|+ ++|||.|++++++++|++++ ++++|||+.||++||+.+ |++++|+||.+ +..|++++.
T Consensus 137 ~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 137 SGFDIHILPQ-GVNKGVAVKKLKEKLGIKPG---ETLVCGDSENDIDLFEVP-----GFGVAVANAQPELKEWADYVTES 207 (225)
T ss_pred CCcEEEEeeC-CCCHHHHHHHHHHHhCCCHH---HEEEECCCHhhHHHHHhc-----CceEEcCChhHHHHHhcCeecCC
Confidence 5679999999 99999999999999999876 899999999999999998 99999999975 478999874
Q ss_pred -CHHH----HHHHHHHH
Q 023990 248 -EPDE----VMDFLQKL 259 (274)
Q Consensus 248 -~~~~----v~~~L~~l 259 (274)
+.+| |+.+|+++
T Consensus 208 ~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 208 PYGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCCcHHHHHHHHHHhh
Confidence 4567 88888764
No 24
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.97 E-value=1.1e-29 Score=216.82 Aligned_cols=218 Identities=18% Similarity=0.185 Sum_probs=141.7
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccCceEeccCcceEeCCCCCc
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPTKGL 90 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~~~~ 90 (274)
+|++||||||++. +..+.+.++++|++|++++ .|++||||++..+.+++ +++ .++||+||+.|+..++..
T Consensus 1 li~~DlDGTll~~-----~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~-~~~I~~NGa~i~~~~~~~ 74 (256)
T TIGR01486 1 WIFTDLDGTLLDP-----HGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE-DPFIVENGGAIYGPRGWF 74 (256)
T ss_pred CEEEcCCCCCcCC-----CCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-CcEEEcCCeEEEeCCCcc
Confidence 5899999999983 2324446999999999995 89999999999988776 333 479999999999865432
Q ss_pred cccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEE----------------------ecCceEEEEccCCChhh
Q 023990 91 KYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVE----------------------NNKFCISVHFRCVDEKK 148 (274)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e----------------------~~~~~~~~~~~~~~~~~ 148 (274)
... ..|+.....+ .+.+.++.+.+..... ..-.... .......+.. +.
T Consensus 75 ~~~--~~~~~~~~i~--~~~~~~il~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 144 (256)
T TIGR01486 75 TEP--EYPVIALGIP--YEKIRARLEELSEELG-FKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW---SE-- 144 (256)
T ss_pred cCC--CeEEEEcCCC--HHHHHHHHHHHHHHhC-CCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec---Ch--
Confidence 100 0011101111 1233444443211100 0000000 0000000001 11
Q ss_pred HHHHHHHHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcC--CCCCeeEEEEcCCcCCHHHHHHHHhCC
Q 023990 149 WNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFA--DCSNVFPVYIGDDTTDEDAFKILRKRE 226 (274)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~--~~~~~~vi~~GDs~ND~~M~~~~~~~~ 226 (274)
+..+.+.+.+... ++.+..+..++||+|+ ++|||.|+++++++++++ .+ ++++||||.||++||+.+
T Consensus 145 --~~~~~~~~~~~~~-~~~~~~s~~~~ei~~~-~~~Kg~ai~~l~~~~~i~~~~~---~~~a~GD~~ND~~Ml~~a---- 213 (256)
T TIGR01486 145 --ERRERFTEALVEL-GLEVTHGNRFYHVLGA-GSDKGKAANALKQFYNQPGGAI---KVVGLGDSPNDLPLLEVV---- 213 (256)
T ss_pred --HHHHHHHHHHHHc-CCEEEeCCceEEEecC-CCCHHHHHHHHHHHHhhcCCCc---eEEEEcCCHhhHHHHHHC----
Confidence 1223333444433 4565555579999999 999999999999999998 65 899999999999999998
Q ss_pred CceEEEecCCCC-----Ccc--c-eEEe--CCHHHHHHHHHHHH
Q 023990 227 QGFGILVSKFPK-----KTS--A-SYSL--REPDEVMDFLQKLV 260 (274)
Q Consensus 227 ~g~~v~v~na~~-----~~~--A-~~~~--~~~~~v~~~L~~l~ 260 (274)
|++|+|+||.+ +.. | ++++ ++.+||+..|++++
T Consensus 214 -g~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~~ 256 (256)
T TIGR01486 214 -DLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHLL 256 (256)
T ss_pred -CEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHhC
Confidence 99999999962 344 4 4777 36789999999874
No 25
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.97 E-value=6.3e-30 Score=217.38 Aligned_cols=227 Identities=16% Similarity=0.195 Sum_probs=148.7
Q ss_pred EEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---Ccc-CceEeccCcceEeCCCC
Q 023990 14 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLA-ELYYAGSHGMDIKGPTK 88 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~-~~~li~~nG~~i~~~~~ 88 (274)
.+|++||||||+++.+ .+..+++++.++++++++++ .|++||||++..++++. +.+ +.++|++||+.|+.++.
T Consensus 2 ~li~tDlDGTLl~~~~--~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~ 79 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTD--GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGA 79 (249)
T ss_pred eEEEEcCCCcCcCCCC--CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCC
Confidence 5899999999998542 23568999999999999996 99999999999988874 432 23589999999997542
Q ss_pred CccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhHHHHHHHHHHHHhhCC-CcE
Q 023990 89 GLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEYP-QLN 167 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 167 (274)
. .....|... ....|. ...+......+....+.....++.+.+.+... +.......+.+.+.+..+. .+.
T Consensus 80 ~---~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 80 E---VPDQHWAEY-LSEKWQ--RDIVVAITDKFEELKPQPDLEQRPHKVSFFLD---PEAAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred C---cCCHHHHHH-HhcccC--HHHHHHHHhcCcccccCCccccCCeeEEEEec---hhhhhHHHHHHHHHHHhcCCCEE
Confidence 1 111111111 111221 12222222221111122222233344444332 2222234455565555442 233
Q ss_pred -EEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccc--
Q 023990 168 -WRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSA-- 242 (274)
Q Consensus 168 -~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~--~~A-- 242 (274)
+.++..++||+|+ ++|||.|+++|++.+|++.+ ++++|||+.||++||+.+. +++|+|+|+.++ ..+
T Consensus 151 ~~~~~~~~ldi~~~-~~~K~~al~~l~~~~~i~~~---~~i~~GD~~ND~~ml~~~~----~~~va~~na~~~~k~~~~~ 222 (249)
T TIGR01485 151 LIYSSGKDLDILPQ-GSGKGQALQYLLQKLAMEPS---QTLVCGDSGNDIELFEIGS----VRGVIVSNAQEELLQWYDE 222 (249)
T ss_pred EEEECCceEEEEeC-CCChHHHHHHHHHHcCCCcc---CEEEEECChhHHHHHHccC----CcEEEECCCHHHHHHHHHh
Confidence 3467789999999 99999999999999999876 8999999999999999841 689999998653 222
Q ss_pred -----eEEeC--CHHHHHHHHHHH
Q 023990 243 -----SYSLR--EPDEVMDFLQKL 259 (274)
Q Consensus 243 -----~~~~~--~~~~v~~~L~~l 259 (274)
.++++ ..+|+++.|+++
T Consensus 223 ~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 223 NAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred cccCcEEEecCCCcHHHHHHHHHc
Confidence 15554 467888888875
No 26
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.97 E-value=7.6e-30 Score=210.55 Aligned_cols=197 Identities=23% Similarity=0.334 Sum_probs=138.3
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcCccCceEeccCcceEeCCCCCcccc
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVKLAELYYAGSHGMDIKGPTKGLKYN 93 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~~~~~~li~~nG~~i~~~~~~~~~~ 93 (274)
||++|+||||++.. ...++++++++|++|++++ .|+++|||+...+..+++..+.++|++||+.++.+++.. +.
T Consensus 1 li~~D~DgTL~~~~----~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~-~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLDPN----AHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEIL-YI 75 (204)
T ss_pred CEEEeCcCCCcCCC----CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEE-EE
Confidence 58999999999832 2579999999999999995 899999999999998875444689999999999764332 21
Q ss_pred ccCceeccCCCCcchhhH---HHHHHHHHhhhcCCCceEEEecCceEEEEccCC--ChhhHHHHHHHHHHHHhhCCCcEE
Q 023990 94 QKSKVVNFQPASEFLPLI---DKVYKVLVEKTKSTPGARVENNKFCISVHFRCV--DEKKWNDLAQKVKEVVNEYPQLNW 168 (274)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 168 (274)
. +...+..++ +.+...+..+....++...+.+...+.++++.. .......+.+.++......+.+.+
T Consensus 76 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (204)
T TIGR01484 76 E--------PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEA 147 (204)
T ss_pred c--------ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEE
Confidence 0 111111111 111112222222344555666777777777653 111112233333332111245666
Q ss_pred E-ecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEe
Q 023990 169 R-QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILV 233 (274)
Q Consensus 169 ~-~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v 233 (274)
. ++..++||+|+ +++||.|+++++++++++++ ++++|||+.||++||+.+ |++|+|
T Consensus 148 ~~s~~~~~ev~p~-~~~K~~~~~~~~~~~~~~~~---~~~~~GD~~nD~~~~~~~-----~~~vam 204 (204)
T TIGR01484 148 IYVGKTDLEVLPA-GVDKGSALQALLKELNGKRD---EILAFGDSGNDEEMFEVA-----GLAVAV 204 (204)
T ss_pred EEecCCEEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCHHHHHHHHHc-----CCceEC
Confidence 6 68899999999 99999999999999998775 899999999999999998 899887
No 27
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.97 E-value=1.7e-28 Score=211.35 Aligned_cols=225 Identities=16% Similarity=0.208 Sum_probs=146.2
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccCceEeccCcceEeCCC
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPT 87 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~ 87 (274)
.+|+|++|+||||++. +..+++.++++|++|++.+ .|++||||+...+..++ ++. .++|+.||+.|+.++
T Consensus 3 ~~kli~~DlDGTLl~~-----~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~-~~~i~~nGa~i~~~~ 76 (273)
T PRK00192 3 MKLLVFTDLDGTLLDH-----HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE-DPFIVENGAAIYIPK 76 (273)
T ss_pred cceEEEEcCcccCcCC-----CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-CCEEEEcCcEEEecc
Confidence 3689999999999983 3467889999999999995 89999999999988765 333 369999999999764
Q ss_pred CCccc------cccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEe----------------------cCceEEE
Q 023990 88 KGLKY------NQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVEN----------------------NKFCISV 139 (274)
Q Consensus 88 ~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~----------------------~~~~~~~ 139 (274)
+.... ....+++.....+ .+.+.++...+..... ..-..... ......+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 77 NYFPFQPDGERLKGDYWVIELGPP--YEELREILDEISDELG-YPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred cccccCCccccccCCceEEEcCCC--HHHHHHHHHHHHHHhC-CCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 32000 0000111111111 1233344433322100 00000000 0000000
Q ss_pred EccCCChhhHHHHHHHHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCC-CCCeeEEEEcCCcCCHHH
Q 023990 140 HFRCVDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFAD-CSNVFPVYIGDDTTDEDA 218 (274)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~-~~~~~vi~~GDs~ND~~M 218 (274)
.+. .. .+..+.+...++.. ++.+.+++.++||+|. + +||.|++++++.+|+++ + ++++|||+.||++|
T Consensus 154 ~~~--~~---~~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~-~Kg~al~~l~~~~~i~~~~---~v~~~GDs~NDi~m 222 (273)
T PRK00192 154 LWN--GS---EAAKERFEEALKRL-GLKVTRGGRFLHLLGG-G-DKGKAVRWLKELYRRQDGV---ETIALGDSPNDLPM 222 (273)
T ss_pred eec--Cc---hHHHHHHHHHHHHc-CCEEEECCeEEEEeCC-C-CHHHHHHHHHHHHhccCCc---eEEEEcCChhhHHH
Confidence 000 00 12233344444443 4666666789999999 9 99999999999999988 7 89999999999999
Q ss_pred HHHHHhCCCceEEEecCCCCC------ccc-eEEe--C--CHHHHHHHHHHHHh
Q 023990 219 FKILRKREQGFGILVSKFPKK------TSA-SYSL--R--EPDEVMDFLQKLVR 261 (274)
Q Consensus 219 ~~~~~~~~~g~~v~v~na~~~------~~A-~~~~--~--~~~~v~~~L~~l~~ 261 (274)
|+.+ |++++|+||.+. ..| ++++ . +.+||+..|++++.
T Consensus 223 ~~~a-----g~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 223 LEAA-----DIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred HHhC-----CeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 9998 999999999754 334 4555 3 47899999999875
No 28
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.96 E-value=2.2e-29 Score=212.38 Aligned_cols=217 Identities=14% Similarity=0.141 Sum_probs=141.1
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC---cc-CceEeccCcceEeCCCCC
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK---LA-ELYYAGSHGMDIKGPTKG 89 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~---~~-~~~li~~nG~~i~~~~~~ 89 (274)
||++||||||++. +..+++.+ ++++ +++++ .|++||||++..+.++++ +. +.++|++||+.|+.+...
T Consensus 1 li~~DlDgTLl~~-----~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~ 73 (236)
T TIGR02471 1 LIITDLDNTLLGD-----DEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL 73 (236)
T ss_pred CeEEeccccccCC-----HHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC
Confidence 5899999999982 34577766 6776 56664 899999999999998863 32 235999999999765321
Q ss_pred ccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecC--ceEEEEccCCChhhHHHHHHHHHHHHhhCC-Cc
Q 023990 90 LKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNK--FCISVHFRCVDEKKWNDLAQKVKEVVNEYP-QL 166 (274)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 166 (274)
. . ...|... ....|. ..++.. .....++..++... ....++++..+... ...+++.+.+..+. .+
T Consensus 74 ~-~--~~~~~~~-~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~l~~~~~~~ 141 (236)
T TIGR02471 74 Q-P--DRFWQKH-IDHDWR--RQAVVE----ALADIPGLTLQDDQEQGPFKISYLLDPEGE--PILPQIRQRLRQQSQAA 141 (236)
T ss_pred C-C--ChhHHHH-HhcCCC--HHHHHH----HHhcCCCcEeCChhcCCCeeEEEEECcccc--hHHHHHHHHHHhccCCE
Confidence 1 0 0011100 111111 112222 22334554444332 12334444322111 11223333333321 23
Q ss_pred EE-EecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccce
Q 023990 167 NW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSAS 243 (274)
Q Consensus 167 ~~-~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~--~~A~ 243 (274)
.+ .++..++|++|+ ++|||.|+++|++++|++++ ++++||||.||++||+.+ |+||+|+|+.++ ..|+
T Consensus 142 ~~~~~~~~~~ei~~~-~~~K~~al~~l~~~~g~~~~---~~i~~GD~~nD~~ml~~~-----~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 142 KVILSCGWFLDVLPL-RASKGLALRYLSYRWGLPLE---QILVAGDSGNDEEMLRGL-----TLGVVVGNHDPELEGLRH 212 (236)
T ss_pred EEEEECCceEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCccHHHHHcCC-----CcEEEEcCCcHHHHHhhc
Confidence 33 456678999999 99999999999999999875 799999999999999998 899999998753 5677
Q ss_pred ----EEeC--CHHHHHHHHHHH
Q 023990 244 ----YSLR--EPDEVMDFLQKL 259 (274)
Q Consensus 244 ----~~~~--~~~~v~~~L~~l 259 (274)
++++ +.+||+++|+++
T Consensus 213 ~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 213 QQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred CCcEEEcCCCChhHHHHHHHhh
Confidence 6764 467899999875
No 29
>PLN02382 probable sucrose-phosphatase
Probab=99.96 E-value=4.5e-28 Score=218.58 Aligned_cols=240 Identities=16% Similarity=0.156 Sum_probs=152.3
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHH-HHHhhcC-CEEEEcCCCHhhHHhhc---Cc-cCceEeccCcceE
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAV-RQLAKYF-PTAIVTGRCRDKVYDFV---KL-AELYYAGSHGMDI 83 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al-~~L~~~~-~v~i~TGR~~~~l~~~~---~~-~~~~li~~nG~~i 83 (274)
.+++.+|++||||||++..+ +..+++...++| +++.+++ .|+++|||++..+.++. ++ .+.++|++||+.|
T Consensus 6 ~~~~~lI~sDLDGTLL~~~~---~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHHD---PENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred CCCCEEEEEcCCCcCcCCCC---ccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 67788999999999998421 235776666666 8888885 89999999977776653 33 2235888999999
Q ss_pred eCCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhhHHHHHHHHHHHHhhC
Q 023990 84 KGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKKWNDLAQKVKEVVNEY 163 (274)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (274)
++.+... ....|... ....|.. ..+.+.+..+.........+++...+.+.... .....+.+.+.+.+...
T Consensus 83 ~~~~~~~---~d~~w~~~-l~~~w~~--~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~---~~~~~~~~~l~~~~~~~ 153 (413)
T PLN02382 83 AYGESMV---PDHGWVEY-LNKKWDR--EIVVEETSKFPELKLQPETEQRPHKVSFYVDK---KKAQEVIKELSERLEKR 153 (413)
T ss_pred EeCCCCc---cChhHHHH-HhccCCh--hhHHHHHhcCCCcccCCcccCCCeEEEEEech---HHhHHHHHHHHHHHHhc
Confidence 8754221 11112111 1112211 11222222211111111122233344443332 12223344444444332
Q ss_pred -CCcEE-EecCeEEEEeCCCCCCHHHHHHHHHHHc---CcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCc-eEEEecCCC
Q 023990 164 -PQLNW-RQGRMVMEIRPKIEWDKGKALEFLLECL---GFADCSNVFPVYIGDDTTDEDAFKILRKREQG-FGILVSKFP 237 (274)
Q Consensus 164 -~~~~~-~~~~~~iei~p~~~~sKg~al~~l~~~~---~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g-~~v~v~na~ 237 (274)
..+.+ .+++.++||+|+ ++|||.|+++|++++ |++++ ++++||||.||++||+.+ | +||+|+||.
T Consensus 154 g~~~~i~~s~~~~ldI~p~-g~sKg~Al~~L~~~~~~~gi~~~---~~iafGDs~NDleMl~~a-----g~~gvam~NA~ 224 (413)
T PLN02382 154 GLDVKIIYSGGIDLDVLPQ-GAGKGQALAYLLKKLKAEGKAPV---NTLVCGDSGNDAELFSVP-----DVYGVMVSNAQ 224 (413)
T ss_pred CCcEEEEEECCcEEEEEeC-CCCHHHHHHHHHHHhhhcCCChh---cEEEEeCCHHHHHHHhcC-----CCCEEEEcCCc
Confidence 12343 467789999999 999999999999999 88876 899999999999999998 8 899999997
Q ss_pred CC--cc--------ceEEe---CCHHHHHHHHHHHHhhhccCcccc
Q 023990 238 KK--TS--------ASYSL---REPDEVMDFLQKLVRWKRDSADTT 270 (274)
Q Consensus 238 ~~--~~--------A~~~~---~~~~~v~~~L~~l~~~~~~~~~~~ 270 (274)
++ .. |++++ +..+|++..|+++.-....+|++-
T Consensus 225 ~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~~~~~~~~~ 270 (413)
T PLN02382 225 EELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLGPNVSPRDV 270 (413)
T ss_pred HHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCCCCCChhhc
Confidence 53 22 24443 256899999999976666666654
No 30
>PTZ00174 phosphomannomutase; Provisional
Probab=99.96 E-value=1.7e-27 Score=202.13 Aligned_cols=203 Identities=18% Similarity=0.234 Sum_probs=123.6
Q ss_pred CCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcCcc---C-ceEeccCcceEeC
Q 023990 11 GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVKLA---E-LYYAGSHGMDIKG 85 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~~~---~-~~li~~nG~~i~~ 85 (274)
.+.|+|++||||||++ ++..++++++++|++|++++ .|++||||++..+.+.++.+ . .++||+||+.|+.
T Consensus 3 ~~~klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCeEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 3579999999999998 45679999999999999995 89999999999998877532 1 3689999999996
Q ss_pred CCCCccccccCceeccCCCCcchhhHHHHHHHHHhh-----hcCCCceEEEecCceEEEEc-cCCC-h---hhH------
Q 023990 86 PTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEK-----TKSTPGARVENNKFCISVHF-RCVD-E---KKW------ 149 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~e~~~~~~~~~~-~~~~-~---~~~------ 149 (274)
. +..++.. .+..... .+.+.++.+.+... .....+.+...........+ .... . ...
T Consensus 78 ~-~~~i~~~---~i~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (247)
T PTZ00174 78 D-GELFHSQ---SILKFLG---EEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKE 150 (247)
T ss_pred C-CeEEEEE---cchhcCC---HHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCc
Confidence 4 3332210 0000001 13344555544321 11112233332211111111 0000 0 000
Q ss_pred HHHHHHHHHHH-hhCCCcE--EEe-cCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcC----CcCCHHHHHH
Q 023990 150 NDLAQKVKEVV-NEYPQLN--WRQ-GRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD----DTTDEDAFKI 221 (274)
Q Consensus 150 ~~~~~~~~~~~-~~~~~~~--~~~-~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GD----s~ND~~M~~~ 221 (274)
....+.+.+.+ +.++++. ..+ +..++||+|+ |+|||+||++|++++ + ++++||| +.||++||++
T Consensus 151 ~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~-gvsKg~al~~L~~~~----~---eviafGD~~~~~~NDieMl~~ 222 (247)
T PTZ00174 151 HHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPK-GWDKTYCLRHLENDF----K---EIHFFGDKTFEGGNDYEIYND 222 (247)
T ss_pred chHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeC-CCcHHHHHHHHHhhh----h---hEEEEcccCCCCCCcHhhhhc
Confidence 01112222222 3344333 233 3579999999 999999999999982 2 7999999 8999999997
Q ss_pred HHhCCCceEEEecCCC
Q 023990 222 LRKREQGFGILVSKFP 237 (274)
Q Consensus 222 ~~~~~~g~~v~v~na~ 237 (274)
++. .|++|+ ||+
T Consensus 223 ~~~--~g~~v~--n~~ 234 (247)
T PTZ00174 223 PRT--IGHSVK--NPE 234 (247)
T ss_pred CCC--ceEEeC--CHH
Confidence 522 155554 644
No 31
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.96 E-value=7.6e-28 Score=201.04 Aligned_cols=195 Identities=16% Similarity=0.165 Sum_probs=123.7
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccCceEeccCcceEeCCCCCc
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPTKGL 90 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~~~~ 90 (274)
+|++||||||++. +..+++.++++|++|++.+ .|++||||+...+..++ ++...++||+||+.|+.+....
T Consensus 1 ~i~~DlDGTLL~~-----~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~ 75 (221)
T TIGR02463 1 WVFSDLDGTLLDS-----HSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWR 75 (221)
T ss_pred CEEEeCCCCCcCC-----CCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccc
Confidence 5899999999983 3345666999999999995 89999999999988765 3332579999999999764321
Q ss_pred cccccCceeccCCCCcchhhHHHHHHHHHhhhc----CCCceEE-----------------EecCceEEEEccCCChhhH
Q 023990 91 KYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTK----STPGARV-----------------ENNKFCISVHFRCVDEKKW 149 (274)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~-----------------e~~~~~~~~~~~~~~~~~~ 149 (274)
.... -+.. ..... .+.+.++.+.+..... .....+. +.......+... .++
T Consensus 76 ~~~~--~~~~-~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 147 (221)
T TIGR02463 76 EEPG--YPRI-ILGIS-YGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWR-DSD--- 147 (221)
T ss_pred cCCC--ceEE-ecCCC-HHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEec-Cch---
Confidence 1100 0000 00111 1223334433222100 0000000 000001111110 011
Q ss_pred HHHHHHHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce
Q 023990 150 NDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF 229 (274)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~ 229 (274)
+..+.+.+.+... ++.+.++..++||+|+ +++||.|++++++++|++++ ++++|||+.||++||+++ |+
T Consensus 148 -~~~~~~~~~l~~~-~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~lgi~~~---~vi~~GD~~NDi~ml~~a-----g~ 216 (221)
T TIGR02463 148 -SRMPRFTALLADL-GLAIVQGNRFSHVLGA-SSSKGKAANWLKATYNQPDV---KTLGLGDGPNDLPLLEVA-----DY 216 (221)
T ss_pred -hHHHHHHHHHHHc-CCeEEecCCeeEEecC-CCCHHHHHHHHHHHhCCCCC---cEEEECCCHHHHHHHHhC-----Cc
Confidence 2223344444443 4666556789999999 99999999999999999886 899999999999999998 89
Q ss_pred EEEe
Q 023990 230 GILV 233 (274)
Q Consensus 230 ~v~v 233 (274)
|||+
T Consensus 217 ~va~ 220 (221)
T TIGR02463 217 AVVI 220 (221)
T ss_pred eEEe
Confidence 9987
No 32
>PLN02423 phosphomannomutase
Probab=99.94 E-value=2e-25 Score=188.85 Aligned_cols=214 Identities=19% Similarity=0.295 Sum_probs=132.3
Q ss_pred ccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhcCcc---C-ceEeccCcceEe
Q 023990 9 SKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKLA---E-LYYAGSHGMDIK 84 (274)
Q Consensus 9 ~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~~~~---~-~~li~~nG~~i~ 84 (274)
.+..++++++|+||||++ ++..++++++++|++|++++.|++||||++..+...++.. . .++|++||+.++
T Consensus 3 ~~~~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~ 77 (245)
T PLN02423 3 ARKPGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAH 77 (245)
T ss_pred CCccceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHhCCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEE
Confidence 355667788999999998 3457999999999999977889999999999988776532 1 368999999999
Q ss_pred CCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhc-----CCCceEEEecCceEEEE--ccCCChh------hH--
Q 023990 85 GPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTK-----STPGARVENNKFCISVH--FRCVDEK------KW-- 149 (274)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~e~~~~~~~~~--~~~~~~~------~~-- 149 (274)
.. +..++.. ....... .+.+.++.+.+..... ...+.+++......... ...+... .+
T Consensus 78 ~~-g~~i~~~---~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~ 150 (245)
T PLN02423 78 KD-GKLIGTQ---SLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDK 150 (245)
T ss_pred eC-CEEEEEe---cccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCc
Confidence 53 3322210 0000001 1334555554433111 12233444322211111 1111100 11
Q ss_pred -HHHHHHH-HHHHhhCCCcEE--E-ecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcC----CcCCHHHHH
Q 023990 150 -NDLAQKV-KEVVNEYPQLNW--R-QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD----DTTDEDAFK 220 (274)
Q Consensus 150 -~~~~~~~-~~~~~~~~~~~~--~-~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GD----s~ND~~M~~ 220 (274)
....+.+ ..+.+.++++.+ . +|..|+||+|+ |+|||.||++|+ +++ +++|||| +.||++||+
T Consensus 151 i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~-gvnKg~al~~L~-----~~~---e~~aFGD~~~~~~ND~eMl~ 221 (245)
T PLN02423 151 VHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQ-GWDKTYCLQFLE-----DFD---EIHFFGDKTYEGGNDHEIFE 221 (245)
T ss_pred cchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeC-CCCHHHHHHHhc-----CcC---eEEEEeccCCCCCCcHHHHh
Confidence 1111222 223345655443 2 45589999999 999999999999 444 8999999 799999999
Q ss_pred HHHhCCCceEEEecCCCCCccceEEeCCHHHHHHHHHHHH
Q 023990 221 ILRKREQGFGILVSKFPKKTSASYSLREPDEVMDFLQKLV 260 (274)
Q Consensus 221 ~~~~~~~g~~v~v~na~~~~~A~~~~~~~~~v~~~L~~l~ 260 (274)
... -.++ .+.+++++..+|.+++
T Consensus 222 ~~~----~~~~-------------~~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 222 SER----TIGH-------------TVTSPDDTREQCTALF 244 (245)
T ss_pred CCC----cceE-------------EeCCHHHHHHHHHHhc
Confidence 631 1233 4456788888887764
No 33
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.94 E-value=7e-27 Score=197.88 Aligned_cols=200 Identities=23% Similarity=0.282 Sum_probs=120.5
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc-CCEEEEcCCCHhhHHhhc---Cc-cCceEeccCcceEeCC
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV---KL-AELYYAGSHGMDIKGP 86 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~-~~v~i~TGR~~~~l~~~~---~~-~~~~li~~nG~~i~~~ 86 (274)
+++||++||||||++. +.....+..+.++...+. ..|+++|||+...+.+++ ++ .+.++||++|+.|+..
T Consensus 1 ~~~ll~sDlD~Tl~~~-----~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~ 75 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDG-----DDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYG 75 (247)
T ss_dssp -SEEEEEETBTTTBHC-----HHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEES
T ss_pred CCEEEEEECCCCCcCC-----CHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEc
Confidence 5789999999999931 112223444444411122 379999999999988875 33 2457999999999984
Q ss_pred CCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEE----EecCceEEEEccCCChhhHHHHHHHHHHHHhh
Q 023990 87 TKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARV----ENNKFCISVHFRCVDEKKWNDLAQKVKEVVNE 162 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (274)
. . +.....|.. .....|.. +.+.+.+.. .++... ...++.+++.+..... ....+.+++.++.
T Consensus 76 ~-~--~~~d~~w~~-~i~~~w~~--~~v~~~l~~----~~~l~~q~~~~q~~~k~sy~~~~~~~---~~~~~~i~~~l~~ 142 (247)
T PF05116_consen 76 E-N--WQPDEEWQA-HIDERWDR--ERVEEILAE----LPGLRPQPESEQRPFKISYYVDPDDS---ADILEEIRARLRQ 142 (247)
T ss_dssp S-T--TEE-HHHHH-HHHTT--H--HHHHHHHHC----HCCEEEGGCCCGCCTCECEEEETTSH---CHHHHHHHHHHHC
T ss_pred C-C--CcChHHHHH-HHHhcCCh--HHHHHHHHH----hhCcccCCccccCCeeEEEEEecccc---hhHHHHHHHHHHH
Confidence 3 1 221112221 01122211 233333332 233222 2233455555443322 2345667777754
Q ss_pred CCCc--EE-EecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC
Q 023990 163 YPQL--NW-RQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK 239 (274)
Q Consensus 163 ~~~~--~~-~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~ 239 (274)
. ++ .+ .++..+++|.|+ ++|||.|+++|+++++++.+ +++++|||.||++||... ..+|+|+|+.++
T Consensus 143 ~-~l~~~~i~s~~~~ldilP~-~a~K~~Al~~L~~~~~~~~~---~vl~aGDSgND~~mL~~~-----~~~vvV~Na~~e 212 (247)
T PF05116_consen 143 R-GLRVNVIYSNGRDLDILPK-GASKGAALRYLMERWGIPPE---QVLVAGDSGNDLEMLEGG-----DHGVVVGNAQPE 212 (247)
T ss_dssp C-TCEEEEEECTCCEEEEEET-T-SHHHHHHHHHHHHT--GG---GEEEEESSGGGHHHHCCS-----SEEEE-TTS-HH
T ss_pred c-CCCeeEEEccceeEEEccC-CCCHHHHHHHHHHHhCCCHH---HEEEEeCCCCcHHHHcCc-----CCEEEEcCCCHH
Confidence 4 34 33 467789999999 99999999999999999875 799999999999999654 689999998754
No 34
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.94 E-value=5e-25 Score=204.41 Aligned_cols=211 Identities=15% Similarity=0.135 Sum_probs=131.7
Q ss_pred CCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcCc--cCceEeccCcceEeCCC
Q 023990 11 GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVKL--AELYYAGSHGMDIKGPT 87 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~~--~~~~li~~nG~~i~~~~ 87 (274)
-.+|+|++||||||++. +..++++++++|++|++++ .|++||||++..+..++.. ...++||+||+.|+.++
T Consensus 414 ~~~KLIfsDLDGTLLd~-----d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNP-----LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred ceeeEEEEECcCCCcCC-----CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 45699999999999984 3357789999999999995 8999999999998876532 12479999999999876
Q ss_pred CCcc--cccc---CceeccCCCCcchhhHHHHHHHHHhhhc-------CCCceEEEecCce-EEE--EccCCChhh----
Q 023990 88 KGLK--YNQK---SKVVNFQPASEFLPLIDKVYKVLVEKTK-------STPGARVENNKFC-ISV--HFRCVDEKK---- 148 (274)
Q Consensus 88 ~~~~--~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~e~~~~~-~~~--~~~~~~~~~---- 148 (274)
+... .... ..+..+...-. .+.+.++.+.+..... .....++...... ... .+...+...
T Consensus 489 ~~~~~~~~~~~~~~~~iI~~~~l~-~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a 567 (694)
T PRK14502 489 DYFRLPFAYDRVAGNYLVIELGMA-YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELA 567 (694)
T ss_pred CcccccccccccCCCeEEEEcCCC-HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHH
Confidence 4210 0000 00011111111 2333444444432110 0111121110000 000 000000000
Q ss_pred ----------H---HHHHHHHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEE--cCCc
Q 023990 149 ----------W---NDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYI--GDDT 213 (274)
Q Consensus 149 ----------~---~~~~~~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~--GDs~ 213 (274)
+ .+..+.+.+.+... ++.+..++.++||+ + ++|||.|+++|++.++++.+ ++++| |||.
T Consensus 568 ~~Re~seKIl~~gd~e~Leel~~~L~~~-~l~v~~g~rfleI~-~-gvdKG~AL~~L~e~~gI~~~---eViafalGDs~ 641 (694)
T PRK14502 568 KQREYSETVHIEGDKRSTNIVLNHIQQS-GLEYSFGGRFYEVT-G-GNDKGKAIKILNELFRLNFG---NIHTFGLGDSE 641 (694)
T ss_pred hhccCceeEEEcCCHHHHHHHHHHHHHc-CcEEEECCEEEEeC-C-CCCHHHHHHHHHHHhCCCcc---ceEEEEcCCcH
Confidence 0 12334444444443 56766788999999 7 89999999999999998875 67777 9999
Q ss_pred CCHHHHHHHHhCCCceEEEecCCCC
Q 023990 214 TDEDAFKILRKREQGFGILVSKFPK 238 (274)
Q Consensus 214 ND~~M~~~~~~~~~g~~v~v~na~~ 238 (274)
||++||+++ |+||+|++...
T Consensus 642 NDisMLe~A-----g~gVAM~~~~~ 661 (694)
T PRK14502 642 NDYSMLETV-----DSPILVQRPGN 661 (694)
T ss_pred hhHHHHHhC-----CceEEEcCCCC
Confidence 999999999 99999987643
No 35
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.92 E-value=1.9e-24 Score=182.62 Aligned_cols=201 Identities=13% Similarity=0.192 Sum_probs=126.0
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccCceEeccCcceEeCCCC
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPTK 88 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~~ 88 (274)
.|+||+||||||+++ +..+++.++++|++|++++ .|++||||++.++..+. ++. .++|++||+.|+.+.+
T Consensus 1 ~KLIftDLDGTLLd~-----~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~-~p~I~eNGA~I~~p~~ 74 (302)
T PRK12702 1 MRLVLSSLDGSLLDL-----EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE-HPFICEDGSAIYVPEH 74 (302)
T ss_pred CcEEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC-CeEEEeCCcEEEEccc
Confidence 479999999999994 3357889999999999995 89999999999988765 443 3799999999998854
Q ss_pred Cccc---c----ccCceeccCCCCcchhhHHHHHHHHHh-hh--------------cCCCceEE------EecCceEEEE
Q 023990 89 GLKY---N----QKSKVVNFQPASEFLPLIDKVYKVLVE-KT--------------KSTPGARV------ENNKFCISVH 140 (274)
Q Consensus 89 ~~~~---~----~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~--------------~~~~~~~~------e~~~~~~~~~ 140 (274)
.... . .......+.....+ ..+..+...+.. +- ....|... ..++++..+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y-~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~ 153 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPY-PCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFS 153 (302)
T ss_pred cccccccccccccCCCceEEecCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceE
Confidence 2100 0 00000001112222 112222222211 00 00111100 0122333333
Q ss_pred ccCCChhhHHHHHHHHHHHHhhCCCcEEEecCeEEEEeC---------------------CCCCCHHHHHHHHHHHcCcC
Q 023990 141 FRCVDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRP---------------------KIEWDKGKALEFLLECLGFA 199 (274)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~p---------------------~~~~sKg~al~~l~~~~~~~ 199 (274)
+...+. .. .+.+++. ++.+..|..|+.++. . +++||.|+++|.+.+.-.
T Consensus 154 w~~~~~----~~----~~~~~~~-g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~-~~dKg~A~~~L~~~y~~~ 223 (302)
T PRK12702 154 YSGDPA----RL----REAFAQQ-EANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPN-SLPGEQAVQLLLDCYQRH 223 (302)
T ss_pred ecCCHH----HH----HHHHHHc-CCeEEecCceEEecccccccccccccccccccccccC-CCCHHHHHHHHHHHHHhc
Confidence 332111 11 3444444 678888888887774 4 679999999999998654
Q ss_pred CCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCC
Q 023990 200 DCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKF 236 (274)
Q Consensus 200 ~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na 236 (274)
.. .-.++++|||.||++||+++ .++|.+.+.
T Consensus 224 ~~-~~~tiaLGDspND~~mLe~~-----D~~vvi~~~ 254 (302)
T PRK12702 224 LG-PIKALGIGCSPPDLAFLRWS-----EQKVVLPSP 254 (302)
T ss_pred cC-CceEEEecCChhhHHHHHhC-----CeeEEecCC
Confidence 21 12699999999999999999 799998654
No 36
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.92 E-value=3.4e-24 Score=179.10 Aligned_cols=197 Identities=20% Similarity=0.255 Sum_probs=117.6
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccCceEeccCcceEeCCCCCc
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAELYYAGSHGMDIKGPTKGL 90 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~~i~~~~~~~ 90 (274)
+|++||||||++. + .++++++++|++|++++ .|++||||+...+..++ ++. .++|++||+.|+.+.+..
T Consensus 1 li~~DlDGTLl~~-----~-~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~-~~~I~~NGa~I~~~~~~~ 73 (225)
T TIGR02461 1 VIFTDLDGTLLPP-----G-YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE-PPFIVENGGAIFIPRGYF 73 (225)
T ss_pred CEEEeCCCCCcCC-----C-CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-CcEEEcCCcEEEecCccc
Confidence 5899999999982 2 35678999999999995 89999999999988765 332 379999999999865311
Q ss_pred ccccc-----CceeccCCCCcchhhHHHHHHHHHh-hh-cCCCceEEEe-----------------cCceEEEEccCCCh
Q 023990 91 KYNQK-----SKVVNFQPASEFLPLIDKVYKVLVE-KT-KSTPGARVEN-----------------NKFCISVHFRCVDE 146 (274)
Q Consensus 91 ~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~-~~-~~~~~~~~e~-----------------~~~~~~~~~~~~~~ 146 (274)
.+... .....+...-+ .+.+.++.+.+.. +- ....+..... +.+...+ +.. ++
T Consensus 74 ~~~~~~~~~~~~~~i~~~~l~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~-~~~-~~ 150 (225)
T TIGR02461 74 PFPVGAGREVGNYEVIELGKP-VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETI-FLW-SR 150 (225)
T ss_pred cccccccccCCCeEEEEcCCC-HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcc-cCC-CH
Confidence 00000 00000111100 2233444444433 10 0000000000 0000000 000 11
Q ss_pred hhHHHHHHHHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCC
Q 023990 147 KKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKRE 226 (274)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~ 226 (274)
+ ....+.+.++. .++.+..+..+++ +++ ++|||.|++++++.+++... ..++++|||+.||++||+.+
T Consensus 151 e----~~~~~~~~~~~-~~~~~~~s~~~~~-i~~-~~sK~~al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~a---- 218 (225)
T TIGR02461 151 E----GWEAILVTARA-RGLKYTHGGRFYT-VHG-GSDKGKAIKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVV---- 218 (225)
T ss_pred H----HHHHHHHHHHH-cCCcEEECCEEEE-ECC-CCCHHHHHHHHHHHhccccC-cccEEEEcCCHHHHHHHHhC----
Confidence 1 12222222222 2466666666776 578 99999999999999976321 12699999999999999999
Q ss_pred CceEEEec
Q 023990 227 QGFGILVS 234 (274)
Q Consensus 227 ~g~~v~v~ 234 (274)
|++|++|
T Consensus 219 -g~~v~v~ 225 (225)
T TIGR02461 219 -DLAFLVG 225 (225)
T ss_pred -CCcEecC
Confidence 8999886
No 37
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3.8e-21 Score=181.58 Aligned_cols=226 Identities=29% Similarity=0.399 Sum_probs=180.4
Q ss_pred hhhhhhc-cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC--CEEEEcCCCHhhHHhhc-CccCceEecc
Q 023990 3 HEITEAS-KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCRDKVYDFV-KLAELYYAGS 78 (274)
Q Consensus 3 ~~~~~~~-~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~--~v~i~TGR~~~~l~~~~-~~~~~~li~~ 78 (274)
+.|...| ++++|+|++|+|||+.... +..+...|+.|..++ .++|+|||+...+...+ +.++++++++
T Consensus 492 ~~~i~~y~~s~~rli~ldyd~t~~~~~--------~~~~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aE 563 (732)
T KOG1050|consen 492 EHIVSDYKKSKKRLILLDYDLTLIPPR--------SIKAISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAE 563 (732)
T ss_pred hHhhhhhhhccceEEEecccccccCCC--------CchHHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecc
Confidence 4567778 9999999999999998832 222899999999884 79999999999998765 6789999999
Q ss_pred CcceEeCCCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEecCceEEEEccCCChhh----HHHHHH
Q 023990 79 HGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVENNKFCISVHFRCVDEKK----WNDLAQ 154 (274)
Q Consensus 79 nG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~----~~~~~~ 154 (274)
||+.++.+++ |. ..... .+|.+.+.+.++.|++++||+++|.++.++.|||++.+++. +.++.+
T Consensus 564 hG~f~r~~~~---w~------~~~~~---~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~ 631 (732)
T KOG1050|consen 564 HGYFVRIPGK---WE------TCVLD---LDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRNADPEFGELQAKELLE 631 (732)
T ss_pred cCceeccCCc---ee------eeccc---ccHHHHHHHHHHHHHhcCCCceecccCceEEEeeeccCcchhHHHHHHHHH
Confidence 9999998875 43 12212 35667777888888999999999999999999999986553 334445
Q ss_pred HHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCC------Cc
Q 023990 155 KVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKRE------QG 228 (274)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~------~g 228 (274)
++.. .+. .+.+..++..+|+.|. |+|||.++..++..+.-+ .++++|+||+..|..||....... +-
T Consensus 632 ~l~~--~~~-~~~v~~g~~~Vev~~~-gvsk~~~~~~~~~~~~~~---~df~~c~g~d~tDed~~~~~~~~~~~~~~~~~ 704 (732)
T KOG1050|consen 632 HLES--KNE-PVEVVRGKHIVEVRPQ-GVSKGLAAERILSEMVKE---PDFVLCIGDDRTDEDMFEFISKAKDPEKVEEI 704 (732)
T ss_pred Hhcc--cCC-CeEEEecCceEEEccc-ccchHHHHHHHHHhcCCC---cceEEEecCCCChHHHHHHHhhccCCcccceE
Confidence 5544 233 4788899999999999 999999999999998822 249999999999999999986532 13
Q ss_pred eEEEecCCCCCccceEEeCCHHHHHHHHH
Q 023990 229 FGILVSKFPKKTSASYSLREPDEVMDFLQ 257 (274)
Q Consensus 229 ~~v~v~na~~~~~A~~~~~~~~~v~~~L~ 257 (274)
|++++|. ..+.|++.+++..+|.+.|+
T Consensus 705 F~~~~g~--~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 705 FACTVGQ--KPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred EEEEcCC--CCcccccccCChHHHHhhcc
Confidence 5666665 55889999999999988764
No 38
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.80 E-value=3.1e-18 Score=136.81 Aligned_cols=208 Identities=16% Similarity=0.252 Sum_probs=126.3
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhh---cCccCceEeccCcceEeC
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF---VKLAELYYAGSHGMDIKG 85 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~---~~~~~~~li~~nG~~i~~ 85 (274)
....++||+|+||||+++.-. .+.+...+.+|++.+ .|++||.++..++..+ +++++.++|++||+.|+.
T Consensus 4 ~~~~~lIFtDlD~TLl~~~ye------~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~ 77 (274)
T COG3769 4 IQMPLLIFTDLDGTLLPHSYE------WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYL 77 (274)
T ss_pred cccceEEEEcccCcccCCCCC------CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEe
Confidence 345689999999999995432 345778899999996 8999999999887665 577778999999999998
Q ss_pred CCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcCCCceEEEe----------------------cCceEEEEccC
Q 023990 86 PTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKSTPGARVEN----------------------NKFCISVHFRC 143 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~----------------------~~~~~~~~~~~ 143 (274)
|.+-.-+.............++-..+..|.+.+...-+...-.++.+ ++++.++..+.
T Consensus 78 p~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs 157 (274)
T COG3769 78 PKGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRS 157 (274)
T ss_pred cccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecc
Confidence 86432111000000000000111123344443322211111111110 01111111111
Q ss_pred CChhhHHHHHHHHHHHHhhCCCcEEEecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHH
Q 023990 144 VDEKKWNDLAQKVKEVVNEYPQLNWRQGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILR 223 (274)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~ 223 (274)
.+ ....++...|.. .++.++.+..+..+... ...||.|+.++++.+..-+.. .-+++.|||.||.|||+.+
T Consensus 158 ~d-----~~~~~~~~~L~e-~glt~v~garf~~v~~a-s~gKg~Aa~~ll~~y~rl~~~-r~t~~~GDg~nD~Pl~ev~- 228 (274)
T COG3769 158 SD-----ERMAQFTARLNE-RGLTFVHGARFWHVLDA-SAGKGQAANWLLETYRRLGGA-RTTLGLGDGPNDAPLLEVM- 228 (274)
T ss_pred cc-----hHHHHHHHHHHh-cCceEEeccceEEEecc-ccCccHHHHHHHHHHHhcCce-eEEEecCCCCCcccHHHhh-
Confidence 10 111223333332 36888877788888888 778999999999876432211 1489999999999999998
Q ss_pred hCCCceEEEecCC
Q 023990 224 KREQGFGILVSKF 236 (274)
Q Consensus 224 ~~~~g~~v~v~na 236 (274)
.|++.|++-
T Consensus 229 ----d~AfiV~~l 237 (274)
T COG3769 229 ----DYAFIVKGL 237 (274)
T ss_pred ----hhheeeccc
Confidence 799999863
No 39
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=99.57 E-value=1.3e-13 Score=108.62 Aligned_cols=192 Identities=21% Similarity=0.310 Sum_probs=128.3
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhcCc----cCceEeccCcceEeC
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVKL----AELYYAGSHGMDIKG 85 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~~~----~~~~li~~nG~~i~~ 85 (274)
+.+..|+.+|.||||+. .+..++|++.+.|++|++...+.++-|..++.+.+.+|. .-.|...+||.+-+.
T Consensus 8 r~~~~l~lfdvdgtLt~-----~r~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~yk 82 (252)
T KOG3189|consen 8 RDEETLCLFDVDGTLTP-----PRQKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAYK 82 (252)
T ss_pred cCCceEEEEecCCcccc-----ccccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEee
Confidence 55667999999999998 356899999999999999999999999999998887753 234788999998776
Q ss_pred CCCCccccccCceeccCCCCcchhhHHHHHHHHHhhhcC-----CCceEEEecCceEEEEc--cCCChhhH---------
Q 023990 86 PTKGLKYNQKSKVVNFQPASEFLPLIDKVYKVLVEKTKS-----TPGARVENNKFCISVHF--RCVDEKKW--------- 149 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~e~~~~~~~~~~--~~~~~~~~--------- 149 (274)
.+... ..+ .+.....+ +.++++..++..|+.. -.|.++|.+...+.+.. |++..++.
T Consensus 83 ~gk~~-~~Q---si~~~LGe---e~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk 155 (252)
T KOG3189|consen 83 GGKLL-SKQ---SIINHLGE---EKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKK 155 (252)
T ss_pred CCcch-hHH---HHHHHHhH---HHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhh
Confidence 54321 111 01111121 2234455544444332 24788998887665542 55543321
Q ss_pred HHHHHHHHHHH-hhCC--CcEEE-ecCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcC----CcCCHHHHH
Q 023990 150 NDLAQKVKEVV-NEYP--QLNWR-QGRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD----DTTDEDAFK 220 (274)
Q Consensus 150 ~~~~~~~~~~~-~~~~--~~~~~-~~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GD----s~ND~~M~~ 220 (274)
..+.+.+.+.+ +.|+ ++... .|...+|+.|+ |++|.+.++++-.. |++ .+.+||| +.||.+.|.
T Consensus 156 ~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~-GWDKtyCLqhle~d-gf~-----~IhFFGDkT~~GGNDyEIf~ 227 (252)
T KOG3189|consen 156 HKIREKFVEALREEFADYGLTFSIGGQISFDVFPK-GWDKTYCLQHLEKD-GFD-----TIHFFGDKTMPGGNDYEIFA 227 (252)
T ss_pred hhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCC-CcchhHHHHHhhhc-CCc-----eEEEeccccCCCCCcceeee
Confidence 12233322222 3444 45544 56678999999 99999999998765 654 7999999 556766553
No 40
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.46 E-value=1.1e-12 Score=128.33 Aligned_cols=192 Identities=10% Similarity=0.118 Sum_probs=108.6
Q ss_pred cCCcEEEE--EecCccccCCccCCCcCCCChHHHHHHHHHhh--c---CCEEEEcCCCHhhHHhhc---Ccc---CceEe
Q 023990 10 KGKQIVMF--LDYDGTLSPIVENPDRAFMSGKMRRAVRQLAK--Y---FPTAIVTGRCRDKVYDFV---KLA---ELYYA 76 (274)
Q Consensus 10 ~~~~~li~--~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~--~---~~v~i~TGR~~~~l~~~~---~~~---~~~li 76 (274)
...+++++ +|+|.| .. ..+..++.++.+.+ . ..|+++|||+...+..++ ++| +..+|
T Consensus 767 ~~~~~~~via~D~d~~-~~---------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI 836 (1050)
T TIGR02468 767 RRRKRLFVIAVDCYDD-KD---------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALI 836 (1050)
T ss_pred cccceEEEEEeccCCC-CC---------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEE
Confidence 44567777 999999 22 12333444444542 2 369999999999998875 343 45799
Q ss_pred ccCcceEeCCCC----CccccccCceeccCCCCcch-hhHHH-HHHHHHhh----hcCCCceEEEec----CceEEEEcc
Q 023990 77 GSHGMDIKGPTK----GLKYNQKSKVVNFQPASEFL-PLIDK-VYKVLVEK----TKSTPGARVENN----KFCISVHFR 142 (274)
Q Consensus 77 ~~nG~~i~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~-i~~~~~~~----~~~~~~~~~e~~----~~~~~~~~~ 142 (274)
|+.|+.|+++.. ...+..+..|.. .+...|. +.+.. +....... -+..++...+.. .+++++...
T Consensus 837 ~~vGTeIyy~~~~~~~~~~~~~D~~w~~-hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~ 915 (1050)
T TIGR02468 837 CNSGSELYYPSLNGSEEGKLVADQDYHS-HIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVK 915 (1050)
T ss_pred eCCCcceeccCcCCCCCCCceECHHHHH-HHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEec
Confidence 999999999731 011111111211 1122331 11221 22221111 011122333322 245544322
Q ss_pred CCChhhHHHHHHHHHHHHhhCC-CcEE-Ee-cCeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeE-EEEcCCcC-CHH
Q 023990 143 CVDEKKWNDLAQKVKEVVNEYP-QLNW-RQ-GRMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFP-VYIGDDTT-DED 217 (274)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~v-i~~GDs~N-D~~ 217 (274)
..+. ....+.+++.+.... ..++ ++ +..+++|.|. .+|||.||++|..++|++.+ ++ ++.|||.| |++
T Consensus 916 d~~~---~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~-~ASKgqAlRyL~~rwgi~l~---~v~VfaGdSGntD~e 988 (1050)
T TIGR02468 916 DPSK---VPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPL-LASRSQALRYLFVRWGIELA---NMAVFVGESGDTDYE 988 (1050)
T ss_pred Cccc---CccHHHHHHHHHhCCCceEEEeecCCcEeeeeeC-CCCHHHHHHHHHHHcCCChH---HeEEEeccCCCCCHH
Confidence 2111 122344555554331 2233 33 4589999999 99999999999999999987 56 66999999 966
Q ss_pred HH
Q 023990 218 AF 219 (274)
Q Consensus 218 M~ 219 (274)
+|
T Consensus 989 ~L 990 (1050)
T TIGR02468 989 GL 990 (1050)
T ss_pred HH
Confidence 55
No 41
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=99.36 E-value=6.4e-12 Score=101.98 Aligned_cols=190 Identities=19% Similarity=0.306 Sum_probs=119.1
Q ss_pred HHHHHHHHhhcCCEEEEcCCCHhhHHhhc-Cc----cCceEeccCcceEeCCCCCccccccCceeccCCCCcchhhHHHH
Q 023990 40 MRRAVRQLAKYFPTAIVTGRCRDKVYDFV-KL----AELYYAGSHGMDIKGPTKGLKYNQKSKVVNFQPASEFLPLIDKV 114 (274)
Q Consensus 40 ~~~al~~L~~~~~v~i~TGR~~~~l~~~~-~~----~~~~li~~nG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 114 (274)
+.+.|.+|++...|+++||-.+..+.+.+ +. .-.++.++||...+..+... +.+. ...... -+.++++
T Consensus 1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~-~~~~---~~~~lg---ee~~~~~ 73 (220)
T PF03332_consen 1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELI-WSQS---IAEFLG---EEKLQKL 73 (220)
T ss_dssp HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEE-EE-----HHHHHH---HHHHHHH
T ss_pred CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCch-hhHh---HHHHcC---HHHHHHH
Confidence 46789999998999999999999988876 32 12379999999988775432 3210 000001 1223444
Q ss_pred HHHHHhhhc-----CCCceEEEecCceEEEEc--cCCChhh---HH------HHHHHHHHHH-hhCCC--cEEE-ecCeE
Q 023990 115 YKVLVEKTK-----STPGARVENNKFCISVHF--RCVDEKK---WN------DLAQKVKEVV-NEYPQ--LNWR-QGRMV 174 (274)
Q Consensus 115 ~~~~~~~~~-----~~~~~~~e~~~~~~~~~~--~~~~~~~---~~------~~~~~~~~~~-~~~~~--~~~~-~~~~~ 174 (274)
.+.+..++. .-.|.++|.+...+.+.. |+++.++ +. .+++.+.+.+ +.+|+ +.+. -|...
T Consensus 74 in~~l~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiS 153 (220)
T PF03332_consen 74 INFCLRYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQIS 153 (220)
T ss_dssp HHHHHHHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTE
T ss_pred HHHHHHHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceE
Confidence 444433322 234788999998888764 5554321 11 1233333333 46775 5554 56789
Q ss_pred EEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcC----CcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeCCHH
Q 023990 175 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD----DTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLREPD 250 (274)
Q Consensus 175 iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GD----s~ND~~M~~~~~~~~~g~~v~v~na~~~~~A~~~~~~~~ 250 (274)
+||.|+ |++|++++++|.+.. + +++++||| +.||.|.+...+ .-.+.+.+++
T Consensus 154 iDvfp~-GwDKty~Lr~l~~~~-~-----~~I~FfGDkt~pGGNDyei~~~~r-----------------t~g~~V~~p~ 209 (220)
T PF03332_consen 154 IDVFPK-GWDKTYCLRHLEDEG-F-----DEIHFFGDKTFPGGNDYEIFEDPR-----------------TIGHTVTSPE 209 (220)
T ss_dssp EEEEET-T-SGGGGGGGTTTTT-------SEEEEEESS-STTSTTHHHHHSTT-----------------SEEEE-SSHH
T ss_pred EccccC-CccHHHHHHHHHhcc-c-----ceEEEEehhccCCCCCceeeecCC-----------------ccEEEeCCHH
Confidence 999999 999999999987643 2 28999999 789999887631 1234556688
Q ss_pred HHHHHHHHHH
Q 023990 251 EVMDFLQKLV 260 (274)
Q Consensus 251 ~v~~~L~~l~ 260 (274)
+..+.|++|+
T Consensus 210 DT~~~l~~l~ 219 (220)
T PF03332_consen 210 DTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888888876
No 42
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.34 E-value=4.2e-12 Score=99.99 Aligned_cols=72 Identities=26% Similarity=0.273 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeCCH--HH-HHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSASYSLREP--DE-VMDFLQK 258 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~--~~A~~~~~~~--~~-v~~~L~~ 258 (274)
+|..+++.+++.++++++ .++++||+.||++|++.+ |.+++|.++... ..|++++.++ +| +++++++
T Consensus 76 ~k~~~~~~~~~~~~~~~~---~~~~vGDs~~D~~~~~~a-----g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~ 147 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPE---NVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCEL 147 (154)
T ss_pred chHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 578899999999998875 799999999999999998 899999987643 5688887643 34 8999999
Q ss_pred HHhhh
Q 023990 259 LVRWK 263 (274)
Q Consensus 259 l~~~~ 263 (274)
+++..
T Consensus 148 ~~~~~ 152 (154)
T TIGR01670 148 LLLAQ 152 (154)
T ss_pred HHHhh
Confidence 98654
No 43
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.29 E-value=6.4e-12 Score=101.77 Aligned_cols=56 Identities=32% Similarity=0.351 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR 247 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~~ 247 (274)
+|..+++.+++.+|++++ +++++||+.||++|++.+ |++++|+++.+ +..|++++.
T Consensus 96 ~k~~~l~~~~~~~gl~~~---ev~~VGDs~~D~~~a~~a-----G~~~~v~~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 96 NKLIAFSDLLEKLAIAPE---QVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLLPRADYVTR 153 (183)
T ss_pred cHHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCChhHHHHHhCCEEec
Confidence 466788999999998875 899999999999999998 89999887643 246788874
No 44
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.27 E-value=3.7e-12 Score=111.62 Aligned_cols=68 Identities=25% Similarity=0.237 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeC--CHHHHHHHHH
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSASYSLR--EPDEVMDFLQ 257 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~--~~A~~~~~--~~~~v~~~L~ 257 (274)
+..|+.+++.+++.+|++++ ++++|||+.||++|++.+ |++|++ ||.++ ..|+++++ +.++|+.+|.
T Consensus 246 ~k~K~~~L~~la~~lgi~~~---qtIaVGDg~NDl~m~~~A-----GlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLA---QTVAIGDGANDLPMIKAA-----GLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cccHHHHHHHHHHHcCCChh---hEEEEECCHHHHHHHHHC-----CCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 34899999999999999886 899999999999999999 999999 87654 68999886 4567776665
Q ss_pred H
Q 023990 258 K 258 (274)
Q Consensus 258 ~ 258 (274)
.
T Consensus 317 ~ 317 (322)
T PRK11133 317 G 317 (322)
T ss_pred c
Confidence 3
No 45
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.01 E-value=1.3e-09 Score=82.81 Aligned_cols=55 Identities=20% Similarity=0.315 Sum_probs=43.6
Q ss_pred EEEEecCccccCCccC---CCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC
Q 023990 15 VMFLDYDGTLSPIVEN---PDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 15 li~~DlDGTL~~~~~~---~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~ 69 (274)
+++||+||||++.... .....+.+.+.+.|+.|++++ .++++|||+...+...+.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHH
Confidence 4899999999984321 011367899999999999995 899999999888887663
No 46
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=99.00 E-value=7.5e-10 Score=87.28 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=54.4
Q ss_pred EEEEecCccccCCccC------CCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHH---hhc--------CccCceEe
Q 023990 15 VMFLDYDGTLSPIVEN------PDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY---DFV--------KLAELYYA 76 (274)
Q Consensus 15 li~~DlDGTL~~~~~~------~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~---~~~--------~~~~~~li 76 (274)
+|++|+||||+..+.. ..+..+++.+.+++++|++++ .|+++|||+..... +++ ++|..+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 5899999999984300 001478999999999999995 89999999988764 333 14445789
Q ss_pred ccCcceEeCC
Q 023990 77 GSHGMDIKGP 86 (274)
Q Consensus 77 ~~nG~~i~~~ 86 (274)
+.||+.+...
T Consensus 81 ~~~g~~~~~~ 90 (157)
T smart00775 81 LSPDRLFAAL 90 (157)
T ss_pred EcCCcchhhh
Confidence 9999988643
No 47
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.75 E-value=1.5e-08 Score=76.39 Aligned_cols=52 Identities=12% Similarity=0.033 Sum_probs=41.0
Q ss_pred EEEEEecCccccCCccCC-CcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHH
Q 023990 14 IVMFLDYDGTLSPIVENP-DRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY 65 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~~~-~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~ 65 (274)
|+|++|+||||+.....+ ....+.+++.++|++|++++ .|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 689999999998743111 12457889999999998885 89999999987765
No 48
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.75 E-value=7.9e-09 Score=82.31 Aligned_cols=72 Identities=22% Similarity=0.345 Sum_probs=58.5
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC--CHHH-HHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR--EPDE-VMDFLQK 258 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~~--~~~~-v~~~L~~ 258 (274)
.|-..++.+++.++++++ ++++|||+.||++|++.+ |++++|+||.+ +..|++++. +.++ +..+++.
T Consensus 82 pkp~~~~~~~~~l~~~~~---ev~~iGD~~nDi~~~~~a-----g~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~ 153 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDA---EVCYVGDDLVDLSMMKRV-----GLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAEL 153 (169)
T ss_pred CCHHHHHHHHHHcCcCHH---HEEEECCCHHHHHHHHHC-----CCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHH
Confidence 566799999999998875 899999999999999998 99999999865 468888874 3333 5677777
Q ss_pred HHhhh
Q 023990 259 LVRWK 263 (274)
Q Consensus 259 l~~~~ 263 (274)
++..+
T Consensus 154 il~~~ 158 (169)
T TIGR02726 154 ILKAQ 158 (169)
T ss_pred HHHhc
Confidence 76543
No 49
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.66 E-value=7.6e-08 Score=82.02 Aligned_cols=76 Identities=20% Similarity=0.103 Sum_probs=57.7
Q ss_pred hccCCcEEEEEecCccccCCccCCCcCCC-ChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccC-ceEeccCcc
Q 023990 8 ASKGKQIVMFLDYDGTLSPIVENPDRAFM-SGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAE-LYYAGSHGM 81 (274)
Q Consensus 8 ~~~~~~~li~~DlDGTL~~~~~~~~~~~i-~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~-~~li~~nG~ 81 (274)
.+....++|+|||||||++... ...| +|.+.++|.+|++++ .++|+|+++...+...+ ++.. +..|.++|.
T Consensus 121 ~~~~~~kvIvFDLDgTLi~~~~---~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gd 197 (301)
T TIGR01684 121 KVFEPPHVVVFDLDSTLITDEE---PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGH 197 (301)
T ss_pred cccccceEEEEecCCCCcCCCC---ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCc
Confidence 3477889999999999999431 1234 599999999999996 89999999888776654 5543 247777887
Q ss_pred eEeCC
Q 023990 82 DIKGP 86 (274)
Q Consensus 82 ~i~~~ 86 (274)
.....
T Consensus 198 v~~~k 202 (301)
T TIGR01684 198 KAEEY 202 (301)
T ss_pred cccCC
Confidence 76653
No 50
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.55 E-value=3.5e-08 Score=75.54 Aligned_cols=72 Identities=24% Similarity=0.272 Sum_probs=60.3
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEeC---CHHHHHHHH
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSASYSLR---EPDEVMDFL 256 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~--~~A~~~~~---~~~~v~~~L 256 (274)
.-+|-.+...|++.+++.++ ++.++||+.||+|+|+.+ |+++++.+|++. ..|+|++. +...|.+++
T Consensus 81 ~~dK~~a~~~L~~~~~l~~e---~~ayiGDD~~Dlpvm~~v-----Gls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~ 152 (170)
T COG1778 81 ISDKLAAFEELLKKLNLDPE---EVAYVGDDLVDLPVMEKV-----GLSVAVADAHPLLKQRADYVTSKKGGEGAVREVC 152 (170)
T ss_pred hHhHHHHHHHHHHHhCCCHH---HhhhhcCccccHHHHHHc-----CCcccccccCHHHHHhhHhhhhccCcchHHHHHH
Confidence 45899999999999999986 899999999999999999 999999999864 67999874 334466666
Q ss_pred HHHHh
Q 023990 257 QKLVR 261 (274)
Q Consensus 257 ~~l~~ 261 (274)
+-++.
T Consensus 153 dlil~ 157 (170)
T COG1778 153 DLILQ 157 (170)
T ss_pred HHHHH
Confidence 65554
No 51
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.43 E-value=5.4e-07 Score=76.96 Aligned_cols=72 Identities=15% Similarity=0.025 Sum_probs=55.3
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCC---ChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccC-ceEeccCcc
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFM---SGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAE-LYYAGSHGM 81 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i---~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~-~~li~~nG~ 81 (274)
...+++|+||+||||++. ...+ +|.+.++|.+|++.+ .++|+|+.+...+...+ +++. +..|.++|.
T Consensus 125 ~~~~~~i~~D~D~TL~~~-----~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITD-----EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred eeeccEEEEecCCCccCC-----CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 678899999999999994 2344 699999999999996 89999987777666554 5543 236777777
Q ss_pred eEeCC
Q 023990 82 DIKGP 86 (274)
Q Consensus 82 ~i~~~ 86 (274)
.....
T Consensus 200 i~~k~ 204 (303)
T PHA03398 200 KAGEY 204 (303)
T ss_pred ccccc
Confidence 66655
No 52
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.15 E-value=2.6e-06 Score=72.36 Aligned_cols=65 Identities=18% Similarity=0.167 Sum_probs=49.2
Q ss_pred EEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcC---CCHhhHHhhc---Cc--cCceEeccCcceEe
Q 023990 14 IVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTG---RCRDKVYDFV---KL--AELYYAGSHGMDIK 84 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TG---R~~~~l~~~~---~~--~~~~li~~nG~~i~ 84 (274)
++|++|+||||+.. +..+ +.+.++|++|++++ .|+++|| |+...+...+ ++ +...+++.+|+...
T Consensus 2 ~~~~~D~DGtl~~~-----~~~i-~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~ 75 (249)
T TIGR01457 2 KGYLIDLDGTMYKG-----KERI-PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD 75 (249)
T ss_pred CEEEEeCCCceEcC-----CeeC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH
Confidence 68999999999983 3344 47999999999995 8999995 8888877654 43 22347788877544
No 53
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.00 E-value=6.7e-06 Score=70.22 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=39.0
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhh
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK 63 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~ 63 (274)
.|+|+||+||||+.... ....+.|.+.++|++|++++ .++++|||+...
T Consensus 1 ~k~i~~D~DGtl~~~~~--~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 1 VKGVLLDISGVLYISDA--KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKES 50 (257)
T ss_pred CCEEEEeCCCeEEeCCC--cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCC
Confidence 36899999999998321 01127789999999999995 899999988764
No 54
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.98 E-value=9.9e-06 Score=67.06 Aligned_cols=58 Identities=29% Similarity=0.265 Sum_probs=46.7
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC-CccceEEeC
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK-KTSASYSLR 247 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~-~~~A~~~~~ 247 (274)
+-.|..+++.+++.+|++++ +++++|||.||+|||+.+ |+++++..-+. +..|+...+
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~---~~~a~gDs~nDlpml~~a-----g~~ia~n~~~~l~~~a~~~~~ 200 (212)
T COG0560 142 GEGKAKALRELAAELGIPLE---ETVAYGDSANDLPMLEAA-----GLPIAVNPKPKLRALADVRIW 200 (212)
T ss_pred cchHHHHHHHHHHHcCCCHH---HeEEEcCchhhHHHHHhC-----CCCeEeCcCHHHHHHHHHhcC
Confidence 45899999999999999876 899999999999999999 89998875322 244544443
No 55
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.96 E-value=1.8e-05 Score=60.17 Aligned_cols=55 Identities=18% Similarity=0.131 Sum_probs=40.9
Q ss_pred EEEEEecCccccCCccCCCcC-------CCChHHHHHHHHHhhcC-CEEEEcCC-CHhhHHhhc
Q 023990 14 IVMFLDYDGTLSPIVENPDRA-------FMSGKMRRAVRQLAKYF-PTAIVTGR-CRDKVYDFV 68 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~~~~~~-------~i~~~~~~al~~L~~~~-~v~i~TGR-~~~~l~~~~ 68 (274)
|++++||||||++....+... .+.+.+.+.|+.|++++ .++++|++ +.......+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH
Confidence 589999999999863210111 24689999999999985 89999999 665555544
No 56
>PRK10444 UMP phosphatase; Provisional
Probab=97.95 E-value=8.7e-06 Score=69.10 Aligned_cols=48 Identities=15% Similarity=0.064 Sum_probs=40.7
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHh
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYD 66 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~ 66 (274)
.++|+||+||||+.. + .+.|.+.++|++|++.+ .++++|+|+......
T Consensus 1 ~~~v~~DlDGtL~~~-----~-~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~ 49 (248)
T PRK10444 1 IKNVICDIDGVLMHD-----N-VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQD 49 (248)
T ss_pred CcEEEEeCCCceEeC-----C-eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHH
Confidence 368999999999982 2 57889999999999996 899999999865544
No 57
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.86 E-value=4.2e-05 Score=64.29 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=40.3
Q ss_pred hhhhhhccCCcE-EEEEecCccccCCccC--CCcCCCCh---------------------------HHHHHHHHHhhcC-
Q 023990 3 HEITEASKGKQI-VMFLDYDGTLSPIVEN--PDRAFMSG---------------------------KMRRAVRQLAKYF- 51 (274)
Q Consensus 3 ~~~~~~~~~~~~-li~~DlDGTL~~~~~~--~~~~~i~~---------------------------~~~~al~~L~~~~- 51 (274)
++|.+....++. .|+|||||||++.... ......++ .+.+.|+.|++++
T Consensus 52 ~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~ 131 (237)
T TIGR01672 52 AQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGD 131 (237)
T ss_pred HHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCC
Confidence 578877755544 9999999999985430 00011122 2788899999985
Q ss_pred CEEEEcCC
Q 023990 52 PTAIVTGR 59 (274)
Q Consensus 52 ~v~i~TGR 59 (274)
.++++|+|
T Consensus 132 ~i~iVTnr 139 (237)
T TIGR01672 132 AIFFVTGR 139 (237)
T ss_pred EEEEEeCC
Confidence 89999999
No 58
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.86 E-value=1.5e-05 Score=68.82 Aligned_cols=45 Identities=18% Similarity=0.124 Sum_probs=36.7
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHh
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRD 62 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~ 62 (274)
+.++|+||+||||+.. + ...+.+.++|++|++.+ .|+++|+|+..
T Consensus 1 ~~~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~L~~~g~~~~~~Tnns~~ 46 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLG-----E-RVVPGAPELLDRLARAGKAALFVTNNSTK 46 (279)
T ss_pred CccEEEEeCCCceEcC-----C-eeCcCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3578999999999882 2 34456999999999985 89999998754
No 59
>PLN02645 phosphoglycolate phosphatase
Probab=97.82 E-value=1.6e-05 Score=69.79 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=39.3
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhH
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKV 64 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l 64 (274)
+.++|+||+||||+.. + .+.+.+.++|++|++++ .|+++|+|+....
T Consensus 27 ~~~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~ 74 (311)
T PLN02645 27 SVETFIFDCDGVIWKG-----D-KLIEGVPETLDMLRSMGKKLVFVTNNSTKSR 74 (311)
T ss_pred hCCEEEEeCcCCeEeC-----C-ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCH
Confidence 5789999999999982 2 35688999999999996 8999999995443
No 60
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.73 E-value=3.4e-05 Score=58.74 Aligned_cols=47 Identities=28% Similarity=0.343 Sum_probs=36.8
Q ss_pred EEEEEecCccccCCc---cCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCC
Q 023990 14 IVMFLDYDGTLSPIV---ENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRC 60 (274)
Q Consensus 14 ~li~~DlDGTL~~~~---~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~ 60 (274)
|++++|+||||++.. .......+.+.+.++|+.|++.+ .++++|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence 589999999999510 00112457899999999999885 899999998
No 61
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.70 E-value=9.9e-05 Score=58.71 Aligned_cols=49 Identities=18% Similarity=0.151 Sum_probs=35.8
Q ss_pred cEEEEEecCccccCCccC------CCcCC-CChHHHHHHHHHhhcC-CEEEEcCCCH
Q 023990 13 QIVMFLDYDGTLSPIVEN------PDRAF-MSGKMRRAVRQLAKYF-PTAIVTGRCR 61 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~------~~~~~-i~~~~~~al~~L~~~~-~v~i~TGR~~ 61 (274)
.|++++|+||||+...+. |++-+ +-+.+.++|++|++++ .++|+|..+.
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred CcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 588999999999974321 11101 3478999999999885 8999997654
No 62
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.62 E-value=0.00036 Score=66.24 Aligned_cols=57 Identities=19% Similarity=0.274 Sum_probs=43.2
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC--CEEEEcCCCHhhHHhhc
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~--~v~i~TGR~~~~l~~~~ 68 (274)
....+.+++..||+++..-. -...+-|.+.++|++|++.+ .++++||.+......++
T Consensus 361 ~~g~~~~~v~~~~~~~g~i~--~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~ 419 (556)
T TIGR01525 361 SQGKTVVFVAVDGELLGVIA--LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419 (556)
T ss_pred hCCcEEEEEEECCEEEEEEE--ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH
Confidence 44567788888998876322 13467899999999998875 69999999888777665
No 63
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.32 E-value=0.00026 Score=57.69 Aligned_cols=45 Identities=27% Similarity=0.288 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecC
Q 023990 183 WDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK 235 (274)
Q Consensus 183 ~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~n 235 (274)
-+|+.+++.+++.++++++ +++++|||.+|++|++.+ |.++++..
T Consensus 146 ~~k~~~~~~~~~~~~~~~~---~~i~iGDs~~D~~~a~~a-----g~~~a~~~ 190 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLT---ETVAVGDSKNDLPMFEVA-----DISISLGD 190 (201)
T ss_pred ccHHHHHHHHHHHhCCCHH---HEEEEcCCHhHHHHHHhc-----CCeEEECC
Confidence 3799999999999998775 799999999999999998 89998864
No 64
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.30 E-value=0.00018 Score=59.62 Aligned_cols=63 Identities=27% Similarity=0.397 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC-CCccceEEeCCH--HHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP-KKTSASYSLREP--DEVMD 254 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~-~~~~A~~~~~~~--~~v~~ 254 (274)
.|...++.+++.++++++ +++++|||.+|+++.+.+ |++++++... .+.+|++++.+. .+++.
T Consensus 152 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~Di~aa~~a-----g~~i~~~~~~~~~~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPE---NTVAVGDGANDLSMIKAA-----GLGIAFNAKPKLQQKADICINKKDLTDILP 217 (219)
T ss_pred ccHHHHHHHHHHcCCCHH---HEEEEECCHHHHHHHHhC-----CCeEEeCCCHHHHHhchhccCCCCHHHHHh
Confidence 489999999999998876 799999999999999998 8888885422 135788887643 44443
No 65
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.29 E-value=0.00014 Score=58.03 Aligned_cols=41 Identities=29% Similarity=0.271 Sum_probs=35.9
Q ss_pred eCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 178 RPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 178 ~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.+. +.+|+.+++.+++.++++++ +++++|||.||++|++.+
T Consensus 137 ~~~-~~~K~~~l~~~~~~~~~~~~---~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPE-GECKGKVLKELLEESKITLK---KIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCC-cchHHHHHHHHHHHhCCCHH---HEEEEeCCHHHHHHHhcC
Confidence 466 78999999999999888765 799999999999999763
No 66
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.29 E-value=0.00024 Score=51.62 Aligned_cols=40 Identities=20% Similarity=0.167 Sum_probs=31.7
Q ss_pred EEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCH
Q 023990 16 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCR 61 (274)
Q Consensus 16 i~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~ 61 (274)
|+||+||||+.. ..+-|.+.++|++|++.+ .++++|-.+.
T Consensus 1 ~l~D~dGvl~~g------~~~ipga~e~l~~L~~~g~~~~~lTNns~ 41 (101)
T PF13344_consen 1 FLFDLDGVLYNG------NEPIPGAVEALDALRERGKPVVFLTNNSS 41 (101)
T ss_dssp EEEESTTTSEET------TEE-TTHHHHHHHHHHTTSEEEEEES-SS
T ss_pred CEEeCccEeEeC------CCcCcCHHHHHHHHHHcCCCEEEEeCCCC
Confidence 689999999982 356788999999999996 7888886553
No 67
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.28 E-value=0.00033 Score=69.64 Aligned_cols=68 Identities=22% Similarity=0.229 Sum_probs=52.6
Q ss_pred EEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC--ccceEEe--CCHH
Q 023990 175 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK--TSASYSL--REPD 250 (274)
Q Consensus 175 iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~--~~A~~~~--~~~~ 250 (274)
.++.|. +|..+++.+.+. .+ .++++||+.||.+|++.+ |.||+|+++... ..|+.++ ++.+
T Consensus 694 ~~~~p~---~K~~~i~~l~~~----~~---~v~~vGDg~nD~~al~~A-----gvgia~g~g~~~a~~~ad~vl~~~~~~ 758 (834)
T PRK10671 694 AGVLPD---GKAEAIKRLQSQ----GR---QVAMVGDGINDAPALAQA-----DVGIAMGGGSDVAIETAAITLMRHSLM 758 (834)
T ss_pred eCCCHH---HHHHHHHHHhhc----CC---EEEEEeCCHHHHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHH
Confidence 345566 599888887543 22 799999999999999998 899999997643 5677765 5778
Q ss_pred HHHHHHH
Q 023990 251 EVMDFLQ 257 (274)
Q Consensus 251 ~v~~~L~ 257 (274)
++..+++
T Consensus 759 ~i~~~i~ 765 (834)
T PRK10671 759 GVADALA 765 (834)
T ss_pred HHHHHHH
Confidence 8877775
No 68
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.25 E-value=0.00032 Score=57.30 Aligned_cols=46 Identities=22% Similarity=0.104 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecC
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK 235 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~n 235 (274)
+-.|..+++.+++..+++++ .++++|||.+|++|++.+ |.++++..
T Consensus 153 g~~K~~~l~~~~~~~~~~~~---~~~~~gDs~~D~~~~~~a-----~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLK---DSYAYGDSISDLPLLSLV-----GHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHH---HcEeeeCCcccHHHHHhC-----CCcEEeCC
Confidence 56899999999999998765 799999999999999998 78887764
No 69
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.25 E-value=0.00036 Score=57.41 Aligned_cols=66 Identities=14% Similarity=0.066 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC-CCccceE--EeCCHHHHHHHHHH
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP-KKTSASY--SLREPDEVMDFLQK 258 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~-~~~~A~~--~~~~~~~v~~~L~~ 258 (274)
+..|...++.+. ..+. +++++|||.||++|++.+ |++|++.-.+ ....|+- ++.+++++...+.+
T Consensus 130 ~~~K~~~l~~l~-~~~~------~~v~vGDs~nDl~ml~~A-----g~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 130 KDPKRQSVIAFK-SLYY------RVIAAGDSYNDTTMLSEA-----HAGILFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred cchHHHHHHHHH-hhCC------CEEEEeCCHHHHHHHHhC-----CCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 348999999884 4443 599999999999999999 8999986432 2234443 35677887777665
Q ss_pred H
Q 023990 259 L 259 (274)
Q Consensus 259 l 259 (274)
.
T Consensus 198 ~ 198 (203)
T TIGR02137 198 A 198 (203)
T ss_pred H
Confidence 4
No 70
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.25 E-value=0.00039 Score=53.63 Aligned_cols=58 Identities=22% Similarity=0.197 Sum_probs=42.7
Q ss_pred CCcEEEEEecCccccCCc-----cCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 11 GKQIVMFLDYDGTLSPIV-----ENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~-----~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
.+.||+++|+||||++-. ...+-+...-+-=..|+.|++.+ +++|.|||...-++...
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra 69 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRA 69 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHH
Confidence 567999999999999721 11112233444556788888885 99999999999888775
No 71
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.17 E-value=0.00087 Score=56.33 Aligned_cols=25 Identities=20% Similarity=0.316 Sum_probs=20.1
Q ss_pred hhhhhhhccCC-cEEEEEecCccccC
Q 023990 2 FHEITEASKGK-QIVMFLDYDGTLSP 26 (274)
Q Consensus 2 ~~~~~~~~~~~-~~li~~DlDGTL~~ 26 (274)
.++|.+....+ +..|++|+|||+++
T Consensus 51 ~~~~~~~~~~~~p~av~~DIDeTvld 76 (237)
T PRK11009 51 VAQIEKSLEGRPPMAVGFDIDDTVLF 76 (237)
T ss_pred HHHhhhhccCCCCcEEEEECcCcccc
Confidence 46788877555 55899999999996
No 72
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.16 E-value=0.001 Score=53.08 Aligned_cols=48 Identities=21% Similarity=0.032 Sum_probs=40.2
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCH
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCR 61 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~ 61 (274)
....+++++|+||||+... ...+.+.+.++|+.|++.+ .++++|+.+.
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~----~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~ 70 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD----HNEAYPALRDWIEELKAAGRKLLIVSNNAG 70 (170)
T ss_pred HCCCCEEEEecCCccccCC----CCCcChhHHHHHHHHHHcCCEEEEEeCCch
Confidence 4567899999999999842 2357889999999999985 8999999883
No 73
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.15 E-value=0.00054 Score=57.72 Aligned_cols=46 Identities=20% Similarity=0.175 Sum_probs=37.3
Q ss_pred EEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEc---CCCHhhHHhh
Q 023990 16 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVT---GRCRDKVYDF 67 (274)
Q Consensus 16 i~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~T---GR~~~~l~~~ 67 (274)
++||+||||++. . .+.+.+.++|+.|++++ .++++| ||+...+.+.
T Consensus 1 ~lfD~DGvL~~~-----~-~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~ 50 (236)
T TIGR01460 1 FLFDIDGVLWLG-----H-KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEK 50 (236)
T ss_pred CEEeCcCccCcC-----C-ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHH
Confidence 589999999983 2 34569999999999985 788887 8999876654
No 74
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.11 E-value=0.0012 Score=57.51 Aligned_cols=59 Identities=20% Similarity=0.113 Sum_probs=46.2
Q ss_pred cCCcEEEEEecCccccCCccC----C---CcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 10 KGKQIVMFLDYDGTLSPIVEN----P---DRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~----~---~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
+.+.+++++|+||||...... + .+..+.+.+.++|++|++.+ .++++|||+.......+
T Consensus 155 ~~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l 221 (300)
T PHA02530 155 PGLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTV 221 (300)
T ss_pred CCCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHH
Confidence 445688999999999974321 0 03467899999999999985 89999999998877655
No 75
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.10 E-value=0.00061 Score=54.30 Aligned_cols=59 Identities=20% Similarity=0.107 Sum_probs=45.6
Q ss_pred CCcEEEEEecCccccCCc-----cCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC
Q 023990 11 GKQIVMFLDYDGTLSPIV-----ENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~-----~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~ 69 (274)
+..|+++||+||||++.. ...+-...+.+--.+|+.|++.+ .++|+|+++...+...+.
T Consensus 5 ~~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~ 69 (169)
T TIGR02726 5 KNIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGAVRHRAE 69 (169)
T ss_pred ccCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHHHHHHHH
Confidence 448999999999999831 11112345777889999999995 899999999988877653
No 76
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.09 E-value=0.00042 Score=55.56 Aligned_cols=61 Identities=18% Similarity=0.067 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceE--EEecCCC--CC---ccceEEeCCHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFG--ILVSKFP--KK---TSASYSLREPDEVM 253 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~--v~v~na~--~~---~~A~~~~~~~~~v~ 253 (274)
+...+..+++.++++++ ++++|||+..|++.=+.+ |+. +.+.-.. .. ..|++++++..++.
T Consensus 108 ~p~~~~~a~~~~~~~~~---~~v~VGDs~~Di~aA~~a-----G~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 108 KPGMLLQARKELHIDMA---QSYMVGDKLEDMQAGVAA-----KVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CHHHHHHHHHHcCcChh---hEEEEcCCHHHHHHHHHC-----CCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 45667888888999876 799999999998887776 653 3443221 11 24788888877653
No 77
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.08 E-value=0.00086 Score=67.28 Aligned_cols=66 Identities=23% Similarity=0.349 Sum_probs=47.9
Q ss_pred EEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeCC--HHH
Q 023990 176 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLRE--PDE 251 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~~~--~~~ 251 (274)
.++|. +|...++.+.+ .| + .+.++||+.||.+|++.+ +.||+|+++.+ +.+|++++.+ ...
T Consensus 613 r~~P~---~K~~iV~~lq~-~g---~---~va~iGDG~ND~~alk~A-----dVGia~g~g~~~ak~aAD~vl~dd~f~~ 677 (917)
T TIGR01116 613 RVEPS---HKSELVELLQE-QG---E---IVAMTGDGVNDAPALKKA-----DIGIAMGSGTEVAKEASDMVLADDNFAT 677 (917)
T ss_pred ecCHH---HHHHHHHHHHh-cC---C---eEEEecCCcchHHHHHhC-----CeeEECCCCcHHHHHhcCeEEccCCHHH
Confidence 44555 78777776543 23 2 578899999999999999 89999997643 3578998854 555
Q ss_pred HHHHH
Q 023990 252 VMDFL 256 (274)
Q Consensus 252 v~~~L 256 (274)
+.+.+
T Consensus 678 i~~~i 682 (917)
T TIGR01116 678 IVAAV 682 (917)
T ss_pred HHHHH
Confidence 55544
No 78
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.06 E-value=0.00062 Score=52.93 Aligned_cols=47 Identities=21% Similarity=0.190 Sum_probs=34.5
Q ss_pred EEEEEecCccccCCccCC-----CcCCCChHHHHHHHHHhhcC-CEEEEcCCC
Q 023990 14 IVMFLDYDGTLSPIVENP-----DRAFMSGKMRRAVRQLAKYF-PTAIVTGRC 60 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~~~-----~~~~i~~~~~~al~~L~~~~-~v~i~TGR~ 60 (274)
+.++||+||||....... ....+-+.+.++|+.|++++ .++|+|..+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 368999999999854210 01235678899999999885 788888874
No 79
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.06 E-value=0.0008 Score=64.74 Aligned_cols=67 Identities=19% Similarity=0.247 Sum_probs=51.5
Q ss_pred EEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CCHH
Q 023990 175 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--REPD 250 (274)
Q Consensus 175 iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~~~ 250 (274)
-++.|. +|...++.+.+..+ .++++||+.||.++|+.+ +.|++|+++.. +.+|+.++ ++..
T Consensus 490 a~~~Pe---dK~~~v~~lq~~g~-------~VamvGDG~NDapAL~~A-----dvGiAm~~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 490 AEATPE---DKIALIRQEQAEGK-------LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred cCCCHH---HHHHHHHHHHHcCC-------eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEECCCCHH
Confidence 355666 89999999876532 599999999999999998 89999997653 46788876 3555
Q ss_pred HHHHHH
Q 023990 251 EVMDFL 256 (274)
Q Consensus 251 ~v~~~L 256 (274)
.+.+.+
T Consensus 555 ~Iv~av 560 (675)
T TIGR01497 555 KLIEVV 560 (675)
T ss_pred HHHHHH
Confidence 555444
No 80
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.05 E-value=0.00091 Score=52.26 Aligned_cols=51 Identities=18% Similarity=0.133 Sum_probs=38.6
Q ss_pred EEEEecCccccCCc------cCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHH
Q 023990 15 VMFLDYDGTLSPIV------ENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY 65 (274)
Q Consensus 15 li~~DlDGTL~~~~------~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~ 65 (274)
++++|+||||+..+ .--......+.+.+..+++++++ .++.+|+|+.....
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQAN 58 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHH
Confidence 48999999999852 10112246788899999999997 89999999976543
No 81
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=97.04 E-value=0.15 Score=45.30 Aligned_cols=189 Identities=15% Similarity=0.171 Sum_probs=97.6
Q ss_pred CCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc-CCEEEEcCCCHhhHHhhc----C----------cc----
Q 023990 11 GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV----K----------LA---- 71 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~-~~v~i~TGR~~~~l~~~~----~----------~~---- 71 (274)
.+-+|+-||=|+||+..+.+ -..+..+...|-+|.+. ..|+|+|.=.+....++. | ++
T Consensus 145 ~~L~LvTFDgDvTLY~DG~s---l~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~qk 221 (408)
T PF06437_consen 145 YGLKLVTFDGDVTLYEDGAS---LEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQK 221 (408)
T ss_pred CCceEEEEcCCcccccCCCC---CCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHHh
Confidence 37799999999999985431 12255566666677666 589999988876644331 1 11
Q ss_pred -Cce-EeccCcceEeCCCC---CccccccCceeccCCCCcc-hhhHHHHHHHHHh----hhc--CCCceEEEecCceEEE
Q 023990 72 -ELY-YAGSHGMDIKGPTK---GLKYNQKSKVVNFQPASEF-LPLIDKVYKVLVE----KTK--STPGARVENNKFCISV 139 (274)
Q Consensus 72 -~~~-li~~nG~~i~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~----~~~--~~~~~~~e~~~~~~~~ 139 (274)
++. +.++.--....... ...+....+|... ....| .+.+.++....+. ... ..| ..+-.|+.++.+
T Consensus 222 ~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~-~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp-a~IiRK~RAVGi 299 (408)
T PF06437_consen 222 SNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP-EMKTWSEEDITELLDIAEAALRDCVKRLNLP-ATIIRKERAVGI 299 (408)
T ss_pred cCEEEecccceeEEEecCCCCCCeEEccHHhccCc-cccCcCHHHHHHHHHHHHHHHHHHHHHcCCC-eeEEeecceeeE
Confidence 122 22222222333221 1112222345432 12334 2234444443322 111 234 445555555554
Q ss_pred EccCC---ChhhHHHHHHHHHHHHhhCC---Cc--EEEecC--eEEEEeCCCCCCHHHHHHHHHHHc----CcCCCCCee
Q 023990 140 HFRCV---DEKKWNDLAQKVKEVVNEYP---QL--NWRQGR--MVMEIRPKIEWDKGKALEFLLECL----GFADCSNVF 205 (274)
Q Consensus 140 ~~~~~---~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~--~~iei~p~~~~sKg~al~~l~~~~----~~~~~~~~~ 205 (274)
....- ..+.+.++.=.++..++.++ .+ ....|+ -|+|| | +|.-|++.+...+ ++.++ +
T Consensus 300 vP~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----G-dKs~GV~~lQ~y~~~~~~i~~~---~ 371 (408)
T PF06437_consen 300 VPKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----G-DKSLGVRALQKYFDPEGGIKPS---E 371 (408)
T ss_pred ecCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----C-CcHHhHHHHHHHHHhccCCCcc---c
Confidence 43211 11223332222333343331 13 234443 35554 3 8899999999999 88887 8
Q ss_pred EEEEcCC
Q 023990 206 PVYIGDD 212 (274)
Q Consensus 206 vi~~GDs 212 (274)
++.+||.
T Consensus 372 tLHVGDQ 378 (408)
T PF06437_consen 372 TLHVGDQ 378 (408)
T ss_pred eeeehhh
Confidence 9999995
No 82
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.97 E-value=0.0013 Score=62.06 Aligned_cols=66 Identities=21% Similarity=0.227 Sum_probs=49.9
Q ss_pred EEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEec-CCCC--CccceEEe--CCHH
Q 023990 176 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS-KFPK--KTSASYSL--REPD 250 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~-na~~--~~~A~~~~--~~~~ 250 (274)
++.|. +|...++.+.... + +++++||+.||.++++.+ |.|++++ ++.. +..|++++ ++..
T Consensus 408 ~~~p~---~K~~~i~~l~~~~----~---~v~~vGDg~nD~~al~~A-----~vgia~g~~~~~~~~~~ad~vl~~~~l~ 472 (536)
T TIGR01512 408 ELLPE---DKLEIVKELREKY----G---PVAMVGDGINDAPALAAA-----DVGIAMGASGSDVAIETADVVLLNDDLS 472 (536)
T ss_pred ccCcH---HHHHHHHHHHhcC----C---EEEEEeCCHHHHHHHHhC-----CEEEEeCCCccHHHHHhCCEEEECCCHH
Confidence 44555 7888777775543 2 799999999999999998 8999999 4432 25788887 6777
Q ss_pred HHHHHH
Q 023990 251 EVMDFL 256 (274)
Q Consensus 251 ~v~~~L 256 (274)
++...+
T Consensus 473 ~l~~~i 478 (536)
T TIGR01512 473 RLPQAI 478 (536)
T ss_pred HHHHHH
Confidence 776654
No 83
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.94 E-value=0.0021 Score=61.03 Aligned_cols=66 Identities=23% Similarity=0.298 Sum_probs=49.4
Q ss_pred EEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CCHHH
Q 023990 176 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--REPDE 251 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~~~~ 251 (274)
++.|. +|...++.+.+. .+ +++++||+.||.++++.+ |.+|+|+++.. +..|++++ ++..+
T Consensus 449 ~~~p~---~K~~~v~~l~~~----~~---~v~~VGDg~nD~~al~~A-----~vgia~g~g~~~a~~~Advvl~~~~l~~ 513 (562)
T TIGR01511 449 EVLPD---DKAALIKELQEK----GR---VVAMVGDGINDAPALAQA-----DVGIAIGAGTDVAIEAADVVLMRNDLND 513 (562)
T ss_pred cCChH---HHHHHHHHHHHc----CC---EEEEEeCCCccHHHHhhC-----CEEEEeCCcCHHHHhhCCEEEeCCCHHH
Confidence 44555 888888887652 22 799999999999999998 89999997643 25688877 46666
Q ss_pred HHHHH
Q 023990 252 VMDFL 256 (274)
Q Consensus 252 v~~~L 256 (274)
+..++
T Consensus 514 l~~~i 518 (562)
T TIGR01511 514 VATAI 518 (562)
T ss_pred HHHHH
Confidence 55544
No 84
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.94 E-value=0.0022 Score=53.16 Aligned_cols=67 Identities=18% Similarity=0.168 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCC--C----CccceEEeCCHHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--K----KTSASYSLREPDEVMDFL 256 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~--~----~~~A~~~~~~~~~v~~~L 256 (274)
.+..+++.+++.++++++ ++++|||+.+|+++.+.+ |+ ++.+..+. . ...+++++++..++..+|
T Consensus 150 p~~~~~~~~~~~~~~~~~---~~i~igD~~~Di~~a~~~-----g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPE---EMLFVGDSRNDIQAARAA-----GCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred cChHHHHHHHHHcCCChh---heEEECCCHHHHHHHHHC-----CCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 457789999999999876 899999999999999998 65 56654321 1 135778999999988877
Q ss_pred HH
Q 023990 257 QK 258 (274)
Q Consensus 257 ~~ 258 (274)
.+
T Consensus 222 ~~ 223 (226)
T PRK13222 222 GL 223 (226)
T ss_pred HH
Confidence 54
No 85
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.92 E-value=0.0013 Score=55.62 Aligned_cols=48 Identities=15% Similarity=0.076 Sum_probs=38.7
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhh
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK 63 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~ 63 (274)
-.+.++++||+||||... ..+.|.+.++|++|++++ +++++|..+...
T Consensus 5 ~~~~~~~~~D~dG~l~~~------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 5 INDYDVFLLDLWGVIIDG------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNI 53 (242)
T ss_pred hhcCCEEEEecccccccC------CccCccHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 355789999999999872 356799999999999986 799987766543
No 86
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=96.87 E-value=0.0013 Score=53.79 Aligned_cols=66 Identities=18% Similarity=0.203 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceE-EeCCHHHHHHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASY-SLREPDEVMDFLQKLV 260 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~-~~~~~~~v~~~L~~l~ 260 (274)
.|..+++.+.. .+. +++++|||.||++|.+++ |.++..+.... ...+.+ ++++..++..+|.++.
T Consensus 132 ~k~~~l~~~~~----~~~---~~v~iGDs~~D~~~~~aa-----~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 132 GKRQAVKALKS----LGY---RVIAAGDSYNDTTMLGEA-----DAGILFRPPANVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred hHHHHHHHHHH----hCC---eEEEEeCCHHHHHHHHhC-----CCCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHH
Confidence 56566554432 223 799999999999999998 67776654321 123444 7889999998888775
Q ss_pred h
Q 023990 261 R 261 (274)
Q Consensus 261 ~ 261 (274)
.
T Consensus 200 ~ 200 (205)
T PRK13582 200 A 200 (205)
T ss_pred h
Confidence 3
No 87
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.86 E-value=0.0043 Score=48.55 Aligned_cols=56 Identities=18% Similarity=0.143 Sum_probs=47.0
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~ 69 (274)
+...|-+++|+|.||++++ +...+|+.++.+..+++.+ .++|+|-.+...+.....
T Consensus 25 ~~Gikgvi~DlDNTLv~wd----~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 25 AHGIKGVILDLDNTLVPWD----NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HcCCcEEEEeccCceeccc----CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 6678999999999999985 3467999999999999995 888988887777776543
No 88
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=96.83 E-value=0.001 Score=52.48 Aligned_cols=44 Identities=36% Similarity=0.484 Sum_probs=31.0
Q ss_pred EEEEEecCccccCCcc------CCCcC-CCChHHHHHHHHHhhcC-CEEEEc
Q 023990 14 IVMFLDYDGTLSPIVE------NPDRA-FMSGKMRRAVRQLAKYF-PTAIVT 57 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~------~~~~~-~i~~~~~~al~~L~~~~-~v~i~T 57 (274)
|+.+||+||||....+ ++++- .+++.+.++|++|.+++ .|+|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEe
Confidence 5789999999996422 23332 34668999999998886 788887
No 89
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.80 E-value=0.0022 Score=51.29 Aligned_cols=57 Identities=19% Similarity=0.205 Sum_probs=42.4
Q ss_pred cEEEEEecCccccCCccC-----C----------------CcCCCChHHHHHHHHHhhcC-CEEEEcCC-CHhhHHhhcC
Q 023990 13 QIVMFLDYDGTLSPIVEN-----P----------------DRAFMSGKMRRAVRQLAKYF-PTAIVTGR-CRDKVYDFVK 69 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~-----~----------------~~~~i~~~~~~al~~L~~~~-~v~i~TGR-~~~~l~~~~~ 69 (274)
.||++||+|+||.++... | ....+-+.+.+.|+.|++++ .++++|++ +...+..+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 589999999999974311 0 12345688899999999885 89999988 7776666553
No 90
>PLN02954 phosphoserine phosphatase
Probab=96.76 E-value=0.0033 Score=52.17 Aligned_cols=67 Identities=21% Similarity=0.221 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC----CccceEEeCCHHHHHHHH
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK----KTSASYSLREPDEVMDFL 256 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~----~~~A~~~~~~~~~v~~~L 256 (274)
+..|..+++.+++.++.+ ++++|||+.||+.|.+... ..+.++.+.... ...|++++++..++..+|
T Consensus 153 ~~~K~~~i~~~~~~~~~~-----~~i~iGDs~~Di~aa~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYK-----TMVMIGDGATDLEARKPGG---ADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcCCC-----ceEEEeCCHHHHHhhhcCC---CCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 457999999999988863 6999999999999966531 123444443221 134788888888876654
No 91
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=96.74 E-value=0.0034 Score=49.74 Aligned_cols=46 Identities=22% Similarity=0.194 Sum_probs=38.4
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc-CC--EEEEcCC
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FP--TAIVTGR 59 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~-~~--v~i~TGR 59 (274)
....|.++||+|.||+.+ ....++++..+.++++++. +. |+|+|=.
T Consensus 38 ~~Gik~li~DkDNTL~~~----~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNs 86 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPP----YEDEIPPEYAEWLNELKKQFGKDRVLIVSNS 86 (168)
T ss_pred hcCceEEEEcCCCCCCCC----CcCcCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 677899999999999985 3457999999999999987 33 7777754
No 92
>PLN02954 phosphoserine phosphatase
Probab=96.72 E-value=0.0028 Score=52.68 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=25.4
Q ss_pred CChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 36 MSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 36 i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
+.|.+.+.|+.|++++ .++|+||.+...+..++
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l 118 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVA 118 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence 4567778888888875 78899999887776654
No 93
>PRK06769 hypothetical protein; Validated
Probab=96.70 E-value=0.0016 Score=52.09 Aligned_cols=50 Identities=16% Similarity=0.166 Sum_probs=38.1
Q ss_pred CCcEEEEEecCccccCCcc--CCCcCCCChHHHHHHHHHhhcC-CEEEEcCCC
Q 023990 11 GKQIVMFLDYDGTLSPIVE--NPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRC 60 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~~--~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~ 60 (274)
.++|+|++|.||||-.+.. .++...+-|.+.+.|++|++.+ +++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence 3679999999999976421 1123345789999999999985 899999865
No 94
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.65 E-value=0.0017 Score=52.28 Aligned_cols=64 Identities=20% Similarity=0.163 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCC-----Cccc--eEEeCCHHHHHHHHH
Q 023990 186 GKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK-----KTSA--SYSLREPDEVMDFLQ 257 (274)
Q Consensus 186 g~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~-----~~~A--~~~~~~~~~v~~~L~ 257 (274)
...+..+++.+|++++ ++++|||+.+|+.+-+.+ |+ ++.+..... ...+ ++++.+..++..+|.
T Consensus 106 p~~~~~~~~~l~~~~~---~~~~VgDs~~Di~~A~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 106 PGMLLSIAERLNIDLA---GSPMVGDSLRDLQAAAAA-----GVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHHcCCChh---hEEEEeCCHHHHHHHHHC-----CCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 4567778888898876 899999999999988887 54 444543211 1234 677888777766553
No 95
>PTZ00445 p36-lilke protein; Provisional
Probab=96.63 E-value=0.0033 Score=51.30 Aligned_cols=58 Identities=12% Similarity=0.022 Sum_probs=43.1
Q ss_pred hhhhc-cCCcEEEEEecCccccC-CccCCCcCC---------CChHHHHHHHHHhhcC-CEEEEcCCCHh
Q 023990 5 ITEAS-KGKQIVMFLDYDGTLSP-IVENPDRAF---------MSGKMRRAVRQLAKYF-PTAIVTGRCRD 62 (274)
Q Consensus 5 ~~~~~-~~~~~li~~DlDGTL~~-~~~~~~~~~---------i~~~~~~al~~L~~~~-~v~i~TGR~~~ 62 (274)
++..+ ....|+|++|||-||+. +.+...+.. ++|+.+..+.+|++.+ .|+|+|=-+..
T Consensus 34 ~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 34 FVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence 34445 77889999999999998 222112222 7899999999999884 89999976543
No 96
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.62 E-value=0.0038 Score=53.38 Aligned_cols=61 Identities=18% Similarity=0.112 Sum_probs=42.9
Q ss_pred hhhhhhccCCcEEEEEecCccccCCc--------cC-C------------CcCCCChHHHHHHHHHhhcC-CEEEEcCCC
Q 023990 3 HEITEASKGKQIVMFLDYDGTLSPIV--------EN-P------------DRAFMSGKMRRAVRQLAKYF-PTAIVTGRC 60 (274)
Q Consensus 3 ~~~~~~~~~~~~li~~DlDGTL~~~~--------~~-~------------~~~~i~~~~~~al~~L~~~~-~v~i~TGR~ 60 (274)
++..+.-..++..|++|+|+|+++.. .. + ....+-|.+.+.|+.|.+++ .++++|+|+
T Consensus 65 ~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~ 144 (266)
T TIGR01533 65 DNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRS 144 (266)
T ss_pred HHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCC
Confidence 33333335667899999999998532 00 0 13345578899999999985 899999998
Q ss_pred Hhh
Q 023990 61 RDK 63 (274)
Q Consensus 61 ~~~ 63 (274)
...
T Consensus 145 ~~~ 147 (266)
T TIGR01533 145 EKE 147 (266)
T ss_pred cch
Confidence 544
No 97
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.62 E-value=0.0035 Score=60.67 Aligned_cols=70 Identities=20% Similarity=0.215 Sum_probs=55.4
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CC
Q 023990 173 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--RE 248 (274)
Q Consensus 173 ~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~ 248 (274)
.+-|+.|. +|...++.|.+..+ .++++||+-||-|.|..+ ..||+||.+.+ .+.|+.++ ++
T Consensus 579 v~AellPe---dK~~~V~~l~~~g~-------~VamVGDGINDAPALA~A-----dVGiAmG~GtDvA~eaADvvL~~~d 643 (713)
T COG2217 579 VRAELLPE---DKAEIVRELQAEGR-------KVAMVGDGINDAPALAAA-----DVGIAMGSGTDVAIEAADVVLMRDD 643 (713)
T ss_pred heccCCcH---HHHHHHHHHHhcCC-------EEEEEeCCchhHHHHhhc-----CeeEeecCCcHHHHHhCCEEEecCC
Confidence 34578888 89999999985532 699999999999999998 79999998653 36888876 46
Q ss_pred HHHHHHHHH
Q 023990 249 PDEVMDFLQ 257 (274)
Q Consensus 249 ~~~v~~~L~ 257 (274)
...|...++
T Consensus 644 L~~v~~ai~ 652 (713)
T COG2217 644 LSAVPEAID 652 (713)
T ss_pred HHHHHHHHH
Confidence 666665553
No 98
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.60 E-value=0.0033 Score=47.10 Aligned_cols=64 Identities=25% Similarity=0.326 Sum_probs=44.3
Q ss_pred CCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEe-cC--CCCC--ccceEEeCCHHHHHHHHH
Q 023990 183 WDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILV-SK--FPKK--TSASYSLREPDEVMDFLQ 257 (274)
Q Consensus 183 ~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v-~n--a~~~--~~A~~~~~~~~~v~~~L~ 257 (274)
..|..-++.|.. +.+ .++++||+-||+.||+.+ ..||++ ++ ++.+ ..|+.++.+..++.+.+.
T Consensus 80 e~K~~ii~eLkk----~~~---k~vmVGnGaND~laLr~A-----DlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~ 147 (152)
T COG4087 80 EMKAKIIRELKK----RYE---KVVMVGNGANDILALREA-----DLGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147 (152)
T ss_pred HHHHHHHHHhcC----CCc---EEEEecCCcchHHHhhhc-----ccceEEeccCCcchHHHhhchhhhhhHHHHHHHhh
Confidence 466655555433 333 799999999999999998 677764 43 2333 468888877777776654
Q ss_pred H
Q 023990 258 K 258 (274)
Q Consensus 258 ~ 258 (274)
.
T Consensus 148 ~ 148 (152)
T COG4087 148 D 148 (152)
T ss_pred c
Confidence 3
No 99
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.60 E-value=0.014 Score=48.08 Aligned_cols=58 Identities=24% Similarity=0.210 Sum_probs=40.4
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEE-ecCCCCCccceE
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGIL-VSKFPKKTSASY 244 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~-v~na~~~~~A~~ 244 (274)
|--|+.-++.+++.-+++- -+++.|||..|.+||+.++.+| |.+|+ .||...-..|+.
T Consensus 189 gg~ka~i~e~~~ele~~d~----sa~~VGDSItDv~ml~~~rgrG-glAvaFNGNeYal~eAdV 247 (315)
T COG4030 189 GGEKAKIMEGYCELEGIDF----SAVVVGDSITDVKMLEAARGRG-GLAVAFNGNEYALKEADV 247 (315)
T ss_pred CcchhHHHHHHHhhcCCCc----ceeEecCcccchHHHHHhhccC-ceEEEecCCcccccccce
Confidence 4467777777788777664 3899999999999999998653 56665 355432233443
No 100
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.57 E-value=0.0044 Score=48.20 Aligned_cols=57 Identities=16% Similarity=0.153 Sum_probs=41.9
Q ss_pred CcEEEEEecCccccCCcc--CCC--cC-----------------CCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 12 KQIVMFLDYDGTLSPIVE--NPD--RA-----------------FMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~--~~~--~~-----------------~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
+++++++||||||+.... ... +. .+-|.+.+.|..|++...++|+|+.+...+..++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHH
Confidence 467899999999997421 110 00 2357889999999855689999999998877665
No 101
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=96.53 E-value=0.0047 Score=51.10 Aligned_cols=18 Identities=22% Similarity=0.246 Sum_probs=15.6
Q ss_pred ccCCcEEEEEecCccccC
Q 023990 9 SKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 9 ~~~~~~li~~DlDGTL~~ 26 (274)
.-+++++++||+||||++
T Consensus 10 ~~~~~k~iiFD~DGTL~~ 27 (219)
T TIGR00338 10 LLRSKKLVVFDMDSTLIN 27 (219)
T ss_pred hhccCCEEEEeCcccCCC
Confidence 356678999999999998
No 102
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=96.51 E-value=0.0037 Score=51.93 Aligned_cols=69 Identities=19% Similarity=0.080 Sum_probs=47.0
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC----CCccceEEeCCHHHHHHHHH
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP----KKTSASYSLREPDEVMDFLQ 257 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~----~~~~A~~~~~~~~~v~~~L~ 257 (274)
|..|..+++.+ +..+. +++++|||.||+.|.+.+ |..++-+... ....+.+...+..+|...|+
T Consensus 146 ~~~K~~~l~~~----~~~~~---~~i~iGDs~~Di~aa~~A-----g~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l~ 213 (219)
T PRK09552 146 GCCKPSLIRKL----SDTND---FHIVIGDSITDLEAAKQA-----DKVFARDFLITKCEELGIPYTPFETFHDVQTELK 213 (219)
T ss_pred CCchHHHHHHh----ccCCC---CEEEEeCCHHHHHHHHHC-----CcceeHHHHHHHHHHcCCCccccCCHHHHHHHHH
Confidence 34588766554 44443 799999999999999887 7755522100 12345556688999999998
Q ss_pred HHHhh
Q 023990 258 KLVRW 262 (274)
Q Consensus 258 ~l~~~ 262 (274)
++.+.
T Consensus 214 ~~~~~ 218 (219)
T PRK09552 214 HLLEV 218 (219)
T ss_pred HHhcc
Confidence 88753
No 103
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.49 E-value=0.0077 Score=51.88 Aligned_cols=70 Identities=24% Similarity=0.463 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCC--CC----CccceEEeCCHHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKF--PK----KTSASYSLREPDEVMDFL 256 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na--~~----~~~A~~~~~~~~~v~~~L 256 (274)
.|..++..+++.++++++ ++++|||+.+|+.+-+.+ |. +|.+... .. ...|++++++..++..++
T Consensus 196 ~k~~~~~~~l~~~~~~p~---~~l~IGDs~~Di~aA~~A-----G~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 196 SKRRALSQLVAREGWQPA---AVMYVGDETRDVEAARQV-----GLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAV 267 (273)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHH
Confidence 567889999999998876 799999999999988887 54 4444432 21 135889999999999988
Q ss_pred HHHHh
Q 023990 257 QKLVR 261 (274)
Q Consensus 257 ~~l~~ 261 (274)
.+|+.
T Consensus 268 ~~~~~ 272 (273)
T PRK13225 268 TQLMR 272 (273)
T ss_pred HHHhc
Confidence 88764
No 104
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.49 E-value=0.0054 Score=51.14 Aligned_cols=54 Identities=13% Similarity=0.082 Sum_probs=42.0
Q ss_pred cCCcEEEEEecCccccCCc---------c------------CCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhh
Q 023990 10 KGKQIVMFLDYDGTLSPIV---------E------------NPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK 63 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~---------~------------~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~ 63 (274)
...+-.++||+|.|++... . ...++..-+.++++++.|++++ .|+++|||+...
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 5577899999999998621 0 0124556788999999999995 899999999755
No 105
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.48 E-value=0.0031 Score=53.86 Aligned_cols=50 Identities=24% Similarity=0.229 Sum_probs=37.7
Q ss_pred CCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcC---CCHhhHHh
Q 023990 11 GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTG---RCRDKVYD 66 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TG---R~~~~l~~ 66 (274)
.+++.++||+||||.. ....-|.+.++|++|++++ .++++|= |++..+..
T Consensus 6 ~~y~~~l~DlDGvl~~------G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~ 59 (269)
T COG0647 6 DKYDGFLFDLDGVLYR------GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAA 59 (269)
T ss_pred hhcCEEEEcCcCceEe------CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHH
Confidence 4566799999999997 2356789999999999995 7777764 44443433
No 106
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.41 E-value=0.0037 Score=61.30 Aligned_cols=66 Identities=23% Similarity=0.266 Sum_probs=49.1
Q ss_pred EEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CCHH
Q 023990 175 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--REPD 250 (274)
Q Consensus 175 iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~~~ 250 (274)
.+..|. +|...++.+.+. . .++++||+.||.++|+.+ +.||+|+++.. ...|+.++ ++..
T Consensus 611 ~~~~p~---~K~~~v~~l~~~-----~---~v~mvGDgiNDapAl~~A-----~vgia~g~~~~~a~~~adivl~~~~l~ 674 (741)
T PRK11033 611 AGLLPE---DKVKAVTELNQH-----A---PLAMVGDGINDAPAMKAA-----SIGIAMGSGTDVALETADAALTHNRLR 674 (741)
T ss_pred cCCCHH---HHHHHHHHHhcC-----C---CEEEEECCHHhHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHH
Confidence 345566 799988887632 2 599999999999999998 89999998753 25678776 4555
Q ss_pred HHHHHH
Q 023990 251 EVMDFL 256 (274)
Q Consensus 251 ~v~~~L 256 (274)
++...+
T Consensus 675 ~l~~~i 680 (741)
T PRK11033 675 GLAQMI 680 (741)
T ss_pred HHHHHH
Confidence 655433
No 107
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.40 E-value=0.0073 Score=51.98 Aligned_cols=71 Identities=18% Similarity=0.229 Sum_probs=53.4
Q ss_pred eCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCC--CC----CccceEEeCCHH
Q 023990 178 RPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKF--PK----KTSASYSLREPD 250 (274)
Q Consensus 178 ~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na--~~----~~~A~~~~~~~~ 250 (274)
++. +-.+...++.+++.+|++++ ++++|||+.+|+++-+.+ |+ ++.|..+ .. ...+++++++..
T Consensus 153 ~~~-~Kp~p~~~~~~~~~~g~~~~---~~l~IGD~~~Di~aA~~a-----Gi~~i~v~~G~~~~~~l~~~~~~~vi~~l~ 223 (272)
T PRK13223 153 LPQ-KKPDPAALLFVMKMAGVPPS---QSLFVGDSRSDVLAAKAA-----GVQCVALSYGYNHGRPIAEESPALVIDDLR 223 (272)
T ss_pred CCC-CCCCcHHHHHHHHHhCCChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCchhhhhcCCCEEECCHH
Confidence 344 45677899999999999876 899999999999999987 65 4555443 11 135788899888
Q ss_pred HHHHHHH
Q 023990 251 EVMDFLQ 257 (274)
Q Consensus 251 ~v~~~L~ 257 (274)
++..++.
T Consensus 224 el~~~~~ 230 (272)
T PRK13223 224 ALLPGCA 230 (272)
T ss_pred HHHHHHh
Confidence 8775544
No 108
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.39 E-value=0.0076 Score=60.20 Aligned_cols=69 Identities=19% Similarity=0.314 Sum_probs=51.5
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CC
Q 023990 173 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--RE 248 (274)
Q Consensus 173 ~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~ 248 (274)
.+-.+.|. +|..-++.+.+. |. .|.+.||+.||.|+|+.+ ..||+|+++.. +.+|+.++ ++
T Consensus 582 vfAr~~Pe---~K~~iV~~lq~~-G~------vVam~GDGvNDapALk~A-----dVGIAmg~gtdvAk~aADiVLldd~ 646 (867)
T TIGR01524 582 IFARLTPM---QKSRIIGLLKKA-GH------TVGFLGDGINDAPALRKA-----DVGISVDTAADIAKEASDIILLEKS 646 (867)
T ss_pred EEEECCHH---HHHHHHHHHHhC-CC------EEEEECCCcccHHHHHhC-----CEEEEeCCccHHHHHhCCEEEecCC
Confidence 34456777 899999888654 32 699999999999999999 89999997643 46888886 34
Q ss_pred HHHHHHHH
Q 023990 249 PDEVMDFL 256 (274)
Q Consensus 249 ~~~v~~~L 256 (274)
...+...+
T Consensus 647 ~~~I~~ai 654 (867)
T TIGR01524 647 LMVLEEGV 654 (867)
T ss_pred hHHHHHHH
Confidence 44444333
No 109
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.37 E-value=0.0053 Score=59.28 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=52.2
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CCH
Q 023990 174 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--REP 249 (274)
Q Consensus 174 ~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~~ 249 (274)
+-+++|. +|..-++.+.+. | + .|.+.||+.||-|.|+.+ ..||+|+++.. +++|+.++ ++.
T Consensus 488 ~A~~~Pe---dK~~iV~~lQ~~-G---~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~~ 552 (679)
T PRK01122 488 LAEATPE---DKLALIRQEQAE-G---R---LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAGNMVDLDSNP 552 (679)
T ss_pred EccCCHH---HHHHHHHHHHHc-C---C---eEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 3466777 899999998765 2 1 599999999999999999 79999997653 47888876 355
Q ss_pred HHHHHHH
Q 023990 250 DEVMDFL 256 (274)
Q Consensus 250 ~~v~~~L 256 (274)
..+.+.+
T Consensus 553 s~Iv~av 559 (679)
T PRK01122 553 TKLIEVV 559 (679)
T ss_pred HHHHHHH
Confidence 5555444
No 110
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=96.34 E-value=0.0035 Score=59.16 Aligned_cols=67 Identities=21% Similarity=0.276 Sum_probs=47.5
Q ss_pred EEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCC-ccceEEeCCHHHHHH
Q 023990 176 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKK-TSASYSLREPDEVMD 254 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~-~~A~~~~~~~~~v~~ 254 (274)
-++|. -|+..++.|.++-|. .+.|+||+.||.+|++.++. |.||.-..+... -+|++.++.-..|.+
T Consensus 763 RctPt---QKA~v~~llq~~t~k------rvc~IGDGGNDVsMIq~A~~---GiGI~gkEGkQASLAADfSItqF~Hv~r 830 (1051)
T KOG0210|consen 763 RCTPT---QKAQVVRLLQKKTGK------RVCAIGDGGNDVSMIQAADV---GIGIVGKEGKQASLAADFSITQFSHVSR 830 (1051)
T ss_pred ecChh---HHHHHHHHHHHhhCc------eEEEEcCCCccchheeeccc---ceeeecccccccchhccccHHHHHHHHH
Confidence 34565 799999999888873 59999999999999999953 666654443333 467776544333333
No 111
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.32 E-value=0.0058 Score=62.16 Aligned_cols=67 Identities=21% Similarity=0.297 Sum_probs=49.0
Q ss_pred EEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEec-CCCC--CccceEEeC--CH
Q 023990 175 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS-KFPK--KTSASYSLR--EP 249 (274)
Q Consensus 175 iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~-na~~--~~~A~~~~~--~~ 249 (274)
-.+.|. .|..-++.+.+. |. .|.++||+.||.+||+.+ ..||+|| ++.. +.+|+.++. +-
T Consensus 727 ar~sP~---~K~~iV~~lq~~-g~------~Vam~GDGvNDapaLk~A-----dVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 727 ARCAPQ---TKVKMIEALHRR-KA------FCAMTGDGVNDSPSLKMA-----NVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred EecCHH---HHHHHHHHHHhc-CC------eeEEeCCCcchHHHHHhC-----CccEecCCCccHHHHHhcCEEEecCCH
Confidence 345566 899988888765 31 589999999999999998 8999998 4432 467888874 34
Q ss_pred HHHHHHH
Q 023990 250 DEVMDFL 256 (274)
Q Consensus 250 ~~v~~~L 256 (274)
..+...+
T Consensus 792 ~~I~~~i 798 (1053)
T TIGR01523 792 ASILNAI 798 (1053)
T ss_pred HHHHHHH
Confidence 4444433
No 112
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.30 E-value=0.0067 Score=61.54 Aligned_cols=58 Identities=22% Similarity=0.202 Sum_probs=44.3
Q ss_pred EEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC---CCccceEEeC
Q 023990 175 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP---KKTSASYSLR 247 (274)
Q Consensus 175 iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~---~~~~A~~~~~ 247 (274)
-.+.|. .|..-++.+.+. |. .|.++||+.||.+||+.+ ..||+||+.. .+.+|++++.
T Consensus 665 aR~sPe---qK~~IV~~lq~~-g~------vv~~~GDG~ND~paLk~A-----dVGiamg~~G~~vak~aADivL~ 725 (997)
T TIGR01106 665 ARTSPQ---QKLIIVEGCQRQ-GA------IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMILL 725 (997)
T ss_pred EECCHH---HHHHHHHHHHHC-CC------EEEEECCCcccHHHHhhC-----CcceecCCcccHHHHHhhceEEe
Confidence 344555 788888777643 42 599999999999999998 7999999643 2467888874
No 113
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.25 E-value=0.021 Score=47.07 Aligned_cols=68 Identities=18% Similarity=0.114 Sum_probs=51.6
Q ss_pred CCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCC--C----CccceEEeCCHHHHHHH
Q 023990 183 WDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--K----KTSASYSLREPDEVMDF 255 (274)
Q Consensus 183 ~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~--~----~~~A~~~~~~~~~v~~~ 255 (274)
--|...++++++.++++++ ++++|||+.+|+.+-+.+ |. +|.+..+. . +..|++++++..++..+
T Consensus 138 Kp~p~~~~~~~~~~~~~~~---~~~~iGDs~~Di~aa~~a-----G~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 138 KPDPEPVLKALELLGAKPE---EALMVGDNHHDILAGKNA-----GTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred CCCcHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 3567899999999998876 799999999999999887 65 44454321 1 12478889999988777
Q ss_pred HHH
Q 023990 256 LQK 258 (274)
Q Consensus 256 L~~ 258 (274)
+..
T Consensus 210 i~~ 212 (214)
T PRK13288 210 VGD 212 (214)
T ss_pred Hhh
Confidence 654
No 114
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.24 E-value=0.0089 Score=52.76 Aligned_cols=44 Identities=23% Similarity=0.175 Sum_probs=33.6
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc----C-CEEEEc---CCCHhhH
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY----F-PTAIVT---GRCRDKV 64 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~----~-~v~i~T---GR~~~~l 64 (274)
.|+||+||||+.. ..+-+.+.++|+.|+.. + .+.++| ||+....
T Consensus 2 ~~ifD~DGvL~~g------~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~ 53 (321)
T TIGR01456 2 GFAFDIDGVLFRG------KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERAR 53 (321)
T ss_pred EEEEeCcCceECC------ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHH
Confidence 5899999999982 24689999999999985 4 565555 6776653
No 115
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.22 E-value=0.014 Score=51.54 Aligned_cols=57 Identities=21% Similarity=0.203 Sum_probs=43.9
Q ss_pred CcEEEEEecCccccCCc---cCCCc---CCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 12 KQIVMFLDYDGTLSPIV---ENPDR---AFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~---~~~~~---~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
.+|+|++|+|+||.... ..+.. ..+.+...+.|.+|++.+ .++|||..+...+...+
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l 65 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVF 65 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Confidence 57899999999999742 11111 123478999999999996 89999999998877765
No 116
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.20 E-value=0.0083 Score=49.26 Aligned_cols=64 Identities=22% Similarity=0.219 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEec--CCCC----CccceEEeCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVS--KFPK----KTSASYSLREPDEVMDF 255 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~--na~~----~~~A~~~~~~~~~v~~~ 255 (274)
-+...+..+++.++++++ ++++|||+.+|+++-+.+ |+ ++.+. .... ...|++++++..++..+
T Consensus 142 p~p~~~~~~~~~~~~~~~---~~~~igDs~~d~~aa~~a-----G~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 142 PHPDPLLLAAERLGVAPQ---QMVYVGDSRVDIQAARAA-----GCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred CChHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHC-----CCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 346789999999999876 799999999999999998 65 44452 2211 13578888888886653
No 117
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.19 E-value=0.011 Score=47.99 Aligned_cols=31 Identities=26% Similarity=0.101 Sum_probs=21.4
Q ss_pred hHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 38 GKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 38 ~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
+.+.+.|+.|++++ .++|+|+.....+..++
T Consensus 83 ~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l 114 (201)
T TIGR01491 83 DYAEELVRWLKEKGLKTAIVSGGIMCLAKKVA 114 (201)
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH
Confidence 34466677777764 78888888777666654
No 118
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.19 E-value=0.0044 Score=48.97 Aligned_cols=35 Identities=31% Similarity=0.155 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
|...+..+++.++++++ +++++||+.+|+++-+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~---e~l~IGD~~~Di~~A~~a 139 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKA---RSYVIGDRETDMQLAENL 139 (161)
T ss_pred CHHHHHHHHHHcCCCHH---HeEEEeCCHHHHHHHHHC
Confidence 45667788888888775 799999999999988876
No 119
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.15 E-value=0.014 Score=54.78 Aligned_cols=52 Identities=21% Similarity=0.262 Sum_probs=38.8
Q ss_pred cCCcEEEEEecCccccCCcc------CCCcCC-CChHHHHHHHHHhhcC-CEEEEcCCCH
Q 023990 10 KGKQIVMFLDYDGTLSPIVE------NPDRAF-MSGKMRRAVRQLAKYF-PTAIVTGRCR 61 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~------~~~~~~-i~~~~~~al~~L~~~~-~v~i~TGR~~ 61 (274)
..+.|+++||+||||....+ ++++-. +.+.+.++|++|.+.+ .++|+|..+.
T Consensus 165 ~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred CccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 45679999999999996321 111212 4688999999999996 8999997655
No 120
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.12 E-value=0.0077 Score=49.84 Aligned_cols=35 Identities=14% Similarity=0.019 Sum_probs=30.1
Q ss_pred CCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 34 AFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 34 ~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
..+.|.+.+.++.+++.+ +++|+||-+...+.++.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia 111 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIA 111 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHH
Confidence 577899999999999996 89999999987776654
No 121
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.12 E-value=0.012 Score=59.08 Aligned_cols=59 Identities=22% Similarity=0.371 Sum_probs=48.2
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe
Q 023990 173 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL 246 (274)
Q Consensus 173 ~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~ 246 (274)
.+-.+.|. +|..-++.+.+. |. .|.+.||+.||.+.|+.+ ..||+|+++.. +.+|+.++
T Consensus 617 VfAr~sPe---~K~~IV~~Lq~~-G~------vVam~GDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVL 677 (902)
T PRK10517 617 LFARLTPM---HKERIVTLLKRE-GH------VVGFMGDGINDAPALRAA-----DIGISVDGAVDIAREAADIIL 677 (902)
T ss_pred EEEEcCHH---HHHHHHHHHHHC-CC------EEEEECCCcchHHHHHhC-----CEEEEeCCcCHHHHHhCCEEE
Confidence 45567777 899999988764 42 699999999999999999 79999997653 47888886
No 122
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.12 E-value=0.011 Score=59.28 Aligned_cols=69 Identities=23% Similarity=0.274 Sum_probs=52.4
Q ss_pred CeEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--C
Q 023990 172 RMVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--R 247 (274)
Q Consensus 172 ~~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~ 247 (274)
..+-.+.|. +|..-++.+.+. |. .|.+.||+.||.|+|+.+ ..||+|+++.. +.+|+.++ +
T Consensus 616 ~VfAr~sPe---~K~~iV~~Lq~~-G~------vVamtGDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLldd 680 (903)
T PRK15122 616 TVFAKLTPL---QKSRVLKALQAN-GH------TVGFLGDGINDAPALRDA-----DVGISVDSGADIAKESADIILLEK 680 (903)
T ss_pred CEEEEeCHH---HHHHHHHHHHhC-CC------EEEEECCCchhHHHHHhC-----CEEEEeCcccHHHHHhcCEEEecC
Confidence 345577788 899999998764 32 699999999999999999 79999997643 57889886 3
Q ss_pred CHHHHHHH
Q 023990 248 EPDEVMDF 255 (274)
Q Consensus 248 ~~~~v~~~ 255 (274)
+...+...
T Consensus 681 ~f~~Iv~a 688 (903)
T PRK15122 681 SLMVLEEG 688 (903)
T ss_pred ChHHHHHH
Confidence 44444333
No 123
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.10 E-value=0.0091 Score=60.27 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=51.0
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEec-CCCC--CccceEEeC--C
Q 023990 174 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS-KFPK--KTSASYSLR--E 248 (274)
Q Consensus 174 ~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~-na~~--~~~A~~~~~--~ 248 (274)
+-.+.|. +|..-++.+.+. |. .|.++||+.||.++|+.+ ..||+|| ++.. +.+|+.++- +
T Consensus 649 far~sPe---~K~~iV~~lq~~-g~------vVam~GDGvNDapALk~A-----dVGIAmg~~gtdvAk~aADivL~dd~ 713 (941)
T TIGR01517 649 LARSSPL---DKQLLVLMLKDM-GE------VVAVTGDGTNDAPALKLA-----DVGFSMGISGTEVAKEASDIILLDDN 713 (941)
T ss_pred EEECCHH---HHHHHHHHHHHC-CC------EEEEECCCCchHHHHHhC-----CcceecCCCccHHHHHhCCEEEecCC
Confidence 4466777 899999988764 32 599999999999999999 7999999 5443 467888874 4
Q ss_pred HHHHHHHH
Q 023990 249 PDEVMDFL 256 (274)
Q Consensus 249 ~~~v~~~L 256 (274)
...+...+
T Consensus 714 f~~I~~~i 721 (941)
T TIGR01517 714 FASIVRAV 721 (941)
T ss_pred HHHHHHHH
Confidence 44444443
No 124
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.10 E-value=0.013 Score=48.96 Aligned_cols=64 Identities=22% Similarity=0.170 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCC---CC----CccceEEeCCHHHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKF---PK----KTSASYSLREPDEVMDFL 256 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na---~~----~~~A~~~~~~~~~v~~~L 256 (274)
+...+.++++.+|++++ ++++|||+.+|+.+-+.+ |+ +|.+.-+ .. ...+++++++..++.+.|
T Consensus 153 ~p~~~~~~~~~l~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 153 HPLPLLVAAERIGVAPT---DCVYVGDDERDILAARAA-----GMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred CHHHHHHHHHHhCCChh---hEEEeCCCHHHHHHHHHC-----CCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 45678899999999886 899999999999999888 65 3444221 11 124788899988876554
No 125
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=96.08 E-value=0.0092 Score=48.74 Aligned_cols=32 Identities=9% Similarity=0.024 Sum_probs=25.2
Q ss_pred ChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 37 SGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 37 ~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
.|.+.+.|..|++...++++|+.....+..++
T Consensus 70 ~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l 101 (205)
T PRK13582 70 LPGAVEFLDWLRERFQVVILSDTFYEFAGPLM 101 (205)
T ss_pred CCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHH
Confidence 35567888888777778999999998877764
No 126
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.07 E-value=0.00018 Score=69.40 Aligned_cols=86 Identities=41% Similarity=0.446 Sum_probs=65.0
Q ss_pred hhhhhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhh----------HHhhcCcc
Q 023990 2 FHEITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDK----------VYDFVKLA 71 (274)
Q Consensus 2 ~~~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~----------l~~~~~~~ 71 (274)
||.+.-....+..|.++|.||||-.+..++.++.++-.++.+..+..++..-.+++||.... +.++....
T Consensus 178 sEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~ 257 (732)
T KOG1050|consen 178 SEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLL 257 (732)
T ss_pred HHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccc
Confidence 45555555777788999999999998877778888888888888888776566699998554 33344445
Q ss_pred CceEeccCcceEeCCC
Q 023990 72 ELYYAGSHGMDIKGPT 87 (274)
Q Consensus 72 ~~~li~~nG~~i~~~~ 87 (274)
..+.++++|..+..+.
T Consensus 258 ~~~~~~~~~~ei~~~~ 273 (732)
T KOG1050|consen 258 ELPYVGSKGMEIKEPF 273 (732)
T ss_pred cchhHHHHHHHHhhhc
Confidence 6678889999888775
No 127
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.05 E-value=0.013 Score=57.73 Aligned_cols=69 Identities=25% Similarity=0.316 Sum_probs=51.6
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CC
Q 023990 173 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--RE 248 (274)
Q Consensus 173 ~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~ 248 (274)
.+-.+.|. +|..-++.+.+. |. .|.+.||+.||.|.|+.+ ..||+|+++.. +.+|+.++ ++
T Consensus 514 vfAr~~Pe---~K~~iV~~lq~~-G~------~VamvGDGvNDapAL~~A-----dVGIAm~~gtdvAkeaADivLl~d~ 578 (755)
T TIGR01647 514 GFAEVFPE---HKYEIVEILQKR-GH------LVGMTGDGVNDAPALKKA-----DVGIAVAGATDAARSAADIVLTEPG 578 (755)
T ss_pred EEEecCHH---HHHHHHHHHHhc-CC------EEEEEcCCcccHHHHHhC-----CeeEEecCCcHHHHHhCCEEEEcCC
Confidence 35567777 799988887653 32 699999999999999999 79999997653 46788876 34
Q ss_pred HHHHHHHH
Q 023990 249 PDEVMDFL 256 (274)
Q Consensus 249 ~~~v~~~L 256 (274)
...+...+
T Consensus 579 l~~I~~ai 586 (755)
T TIGR01647 579 LSVIVDAI 586 (755)
T ss_pred hHHHHHHH
Confidence 44444433
No 128
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.03 E-value=0.0082 Score=57.95 Aligned_cols=68 Identities=24% Similarity=0.306 Sum_probs=51.6
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CCH
Q 023990 174 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--REP 249 (274)
Q Consensus 174 ~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~~ 249 (274)
+-+++|. +|-.-++.+.+. | + .|...||+.||-|.|+.+ ..||+|+++.. +++|+.++ ++.
T Consensus 484 ~A~~~Pe---dK~~iV~~lQ~~-G---~---~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~l 548 (673)
T PRK14010 484 VAECKPE---DKINVIREEQAK-G---H---IVAMTGDGTNDAPALAEA-----NVGLAMNSGTMSAKEAANLIDLDSNP 548 (673)
T ss_pred EcCCCHH---HHHHHHHHHHhC-C---C---EEEEECCChhhHHHHHhC-----CEEEEeCCCCHHHHHhCCEEEcCCCH
Confidence 3466777 899999988764 3 1 589999999999999999 89999997653 47888886 345
Q ss_pred HHHHHHH
Q 023990 250 DEVMDFL 256 (274)
Q Consensus 250 ~~v~~~L 256 (274)
..+.+.+
T Consensus 549 s~Iv~av 555 (673)
T PRK14010 549 TKLMEVV 555 (673)
T ss_pred HHHHHHH
Confidence 5544443
No 129
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.01 E-value=0.015 Score=58.34 Aligned_cols=66 Identities=21% Similarity=0.328 Sum_probs=48.2
Q ss_pred EEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCC-CC--CccceEEe--CCHH
Q 023990 176 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKF-PK--KTSASYSL--REPD 250 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na-~~--~~~A~~~~--~~~~ 250 (274)
...|. .|...++.+.+. | + .++++||+.||.++++.+ +.||+||+. .. +.+|++++ ++..
T Consensus 600 r~~P~---~K~~iv~~lq~~-g---~---~v~mvGDGvND~pAl~~A-----dVGia~g~~g~~va~~aaDivl~dd~~~ 664 (884)
T TIGR01522 600 RASPE---HKMKIVKALQKR-G---D---VVAMTGDGVNDAPALKLA-----DIGVAMGQTGTDVAKEAADMILTDDDFA 664 (884)
T ss_pred ECCHH---HHHHHHHHHHHC-C---C---EEEEECCCcccHHHHHhC-----CeeEecCCCcCHHHHHhcCEEEcCCCHH
Confidence 44555 797777776543 3 2 699999999999999999 899999853 22 35788887 4566
Q ss_pred HHHHHH
Q 023990 251 EVMDFL 256 (274)
Q Consensus 251 ~v~~~L 256 (274)
.+...+
T Consensus 665 ~i~~~i 670 (884)
T TIGR01522 665 TILSAI 670 (884)
T ss_pred HHHHHH
Confidence 655544
No 130
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=95.98 E-value=0.019 Score=47.72 Aligned_cols=68 Identities=22% Similarity=0.246 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC-C---CccceEEeCCHHHHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP-K---KTSASYSLREPDEVMDFLQ 257 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~-~---~~~A~~~~~~~~~v~~~L~ 257 (274)
.-..+..+++.++.+++ +++.+||+.+|+.|=+.+.- ...+|..|... . ...|++++++..++..+|.
T Consensus 147 ~P~~l~~~~~~~~~~~~---~~l~VGDs~~Di~aA~~Ag~--~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDPE---EALMVGDSLNDILAAKAAGV--PAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCChh---heEEECCCHHHHHHHHHcCC--CEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 35678888899998854 79999999999999999820 01344444321 1 2458899999999887765
No 131
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=95.95 E-value=0.0084 Score=47.63 Aligned_cols=32 Identities=22% Similarity=0.065 Sum_probs=22.6
Q ss_pred ChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 37 SGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 37 ~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
.+.+.+.|+.+++++ .++|+||.....+++++
T Consensus 75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~ 107 (177)
T TIGR01488 75 RPGARELISWLKERGIDTVIVSGGFDFFVEPVA 107 (177)
T ss_pred CcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence 456677777777774 78888888777666654
No 132
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.89 E-value=0.0067 Score=61.95 Aligned_cols=64 Identities=14% Similarity=0.238 Sum_probs=46.6
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC---CCccceEEeCCHH
Q 023990 174 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP---KKTSASYSLREPD 250 (274)
Q Consensus 174 ~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~---~~~~A~~~~~~~~ 250 (274)
+-.++|. .|+.-++.+.+..|. .++++||+.||.+|++.+ ..||.+.... .+.+|++++.+-.
T Consensus 748 ~aR~sP~---qK~~IV~~lk~~~~~------~vl~iGDG~ND~~mlk~A-----dVGIgi~g~eg~qA~~aaD~~i~~F~ 813 (1057)
T TIGR01652 748 CCRVSPS---QKADVVRLVKKSTGK------TTLAIGDGANDVSMIQEA-----DVGVGISGKEGMQAVMASDFAIGQFR 813 (1057)
T ss_pred EeCCCHH---HHHHHHHHHHhcCCC------eEEEEeCCCccHHHHhhc-----CeeeEecChHHHHHHHhhhhhhhhHH
Confidence 3355666 899999888776442 699999999999999999 6788764433 2356888776533
Q ss_pred H
Q 023990 251 E 251 (274)
Q Consensus 251 ~ 251 (274)
.
T Consensus 814 ~ 814 (1057)
T TIGR01652 814 F 814 (1057)
T ss_pred H
Confidence 3
No 133
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=95.85 E-value=0.018 Score=46.05 Aligned_cols=38 Identities=34% Similarity=0.294 Sum_probs=31.2
Q ss_pred eCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 178 RPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 178 ~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.+. |..|+..++.+++.+ ++ .++++||+.||+++.+.+
T Consensus 144 ~~~-g~~K~~~~~~~~~~~---~~---~~i~iGD~~~D~~aa~~~ 181 (188)
T TIGR01489 144 CPC-GCCKGKVIHKLSEPK---YQ---HIIYIGDGVTDVCPAKLS 181 (188)
T ss_pred CCC-CCCHHHHHHHHHhhc---Cc---eEEEECCCcchhchHhcC
Confidence 356 788999999998765 22 799999999999988776
No 134
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=95.84 E-value=0.014 Score=50.20 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=14.9
Q ss_pred cCCcEEEEEecCccccC
Q 023990 10 KGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~ 26 (274)
.+..+.++||+||||++
T Consensus 59 ~~~~k~vIFDlDGTLiD 75 (273)
T PRK13225 59 PQTLQAIIFDFDGTLVD 75 (273)
T ss_pred hhhcCEEEECCcCcccc
Confidence 45678999999999998
No 135
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=95.84 E-value=0.0091 Score=47.46 Aligned_cols=56 Identities=13% Similarity=0.109 Sum_probs=31.3
Q ss_pred cEEEEEecCccccCCccC--------------------CCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHh-hHHhhc
Q 023990 13 QIVMFLDYDGTLSPIVEN--------------------PDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRD-KVYDFV 68 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~--------------------~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~-~l~~~~ 68 (274)
.+||+||||+||.++..+ .+.-.+-+.+..+|+.|++++ .+++||--+.. ..++.+
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L 80 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL 80 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH
Confidence 579999999999974311 012234677788888888875 78888754433 344444
No 136
>PRK11590 hypothetical protein; Provisional
Probab=95.82 E-value=0.012 Score=48.65 Aligned_cols=43 Identities=16% Similarity=0.035 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecC
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK 235 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~n 235 (274)
|-.|-..++..+ +.+.. ...+.|||.||+|||+.+ +.+++|..
T Consensus 161 g~~K~~~l~~~~---~~~~~---~~~aY~Ds~~D~pmL~~a-----~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKI---GTPLR---LYSGYSDSKQDNPLLYFC-----QHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHh---CCCcc---eEEEecCCcccHHHHHhC-----CCCEEECc
Confidence 455666555444 44332 678999999999999999 77888864
No 137
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=95.79 E-value=0.011 Score=46.30 Aligned_cols=55 Identities=18% Similarity=0.224 Sum_probs=38.6
Q ss_pred EEEEEecCccccCCccCCC--------------cCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 14 IVMFLDYDGTLSPIVENPD--------------RAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~~~~--------------~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
|++++||||||+.....+. ...+-|.+.+.|+.|.+...++|.|..+...+..++
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~ 69 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVL 69 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHH
Confidence 6899999999997543211 112468899999999877899999999988777665
No 138
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.78 E-value=0.013 Score=47.13 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=27.3
Q ss_pred CHHHHHHHH---HHHcCcCCCCCeeEEEEcCCcCCHHHHH
Q 023990 184 DKGKALEFL---LECLGFADCSNVFPVYIGDDTTDEDAFK 220 (274)
Q Consensus 184 sKg~al~~l---~~~~~~~~~~~~~vi~~GDs~ND~~M~~ 220 (274)
+|..+++.+ ... +.... .++++|||.||++||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~---~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPD---RVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCC---EEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCC---eEEEEECCHHHHHHhC
Confidence 599999999 443 55544 7999999999999986
No 139
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.72 E-value=0.015 Score=59.32 Aligned_cols=68 Identities=21% Similarity=0.296 Sum_probs=51.5
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeC--CHHH
Q 023990 174 VMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLR--EPDE 251 (274)
Q Consensus 174 ~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~~~A~~~~~--~~~~ 251 (274)
|-.+.|. .|..-++.+.+. |. .|.++||+.||.++|+.+ ..||+|+++....+|++++. +...
T Consensus 782 fAR~sP~---qK~~iV~~lq~~-g~------~V~m~GDG~ND~~ALK~A-----dVGIam~~~das~AA~f~l~~~~~~~ 846 (1054)
T TIGR01657 782 FARMAPD---QKETLVELLQKL-DY------TVGMCGDGANDCGALKQA-----DVGISLSEAEASVAAPFTSKLASISC 846 (1054)
T ss_pred EEecCHH---HHHHHHHHHHhC-CC------eEEEEeCChHHHHHHHhc-----CcceeeccccceeecccccCCCcHHH
Confidence 4467788 899988888753 42 699999999999999999 79999998755567787753 4444
Q ss_pred HHHHH
Q 023990 252 VMDFL 256 (274)
Q Consensus 252 v~~~L 256 (274)
|...+
T Consensus 847 I~~~I 851 (1054)
T TIGR01657 847 VPNVI 851 (1054)
T ss_pred HHHHH
Confidence 44444
No 140
>PRK08238 hypothetical protein; Validated
Probab=95.70 E-value=0.026 Score=52.46 Aligned_cols=46 Identities=11% Similarity=-0.109 Sum_probs=34.7
Q ss_pred CCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc---CccCceEeccCcc
Q 023990 35 FMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV---KLAELYYAGSHGM 81 (274)
Q Consensus 35 ~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~ 81 (274)
.+.+.+.+.|+++++++ .++++|+++...++.++ ++. ..+++.++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF-d~Vigsd~~ 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF-DGVFASDGT 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-CEEEeCCCc
Confidence 35688999999999996 89999999998877664 431 246666654
No 141
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=95.68 E-value=0.031 Score=45.69 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceE-EEec--CCCC----CccceEEeCCHHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFG-ILVS--KFPK----KTSASYSLREPDEVMDFL 256 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~-v~v~--na~~----~~~A~~~~~~~~~v~~~L 256 (274)
-|...++.+++.++++++ ++++|||+.+|+.+-+.+ |.. |.+. .... +..|++++++..++..++
T Consensus 132 P~~~~~~~~~~~~~~~~~---~~l~igD~~~Di~aA~~~-----Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPE---DAVMVGDAVTDLASARAA-----GTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred CChHHHHHHHHHcCCChh---heEEEcCCHHHHHHHHHc-----CCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 457888999999999876 799999999999988887 653 3332 2221 245888999998877654
No 142
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=95.68 E-value=0.014 Score=47.88 Aligned_cols=34 Identities=12% Similarity=0.002 Sum_probs=28.4
Q ss_pred CCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 35 FMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 35 ~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
.+.|.+.+.|+.|++.+.++|+||-....+.+++
T Consensus 68 ~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il 101 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLM 101 (203)
T ss_pred CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHH
Confidence 5678888899999887789999999888777764
No 143
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=95.67 E-value=0.016 Score=47.87 Aligned_cols=67 Identities=18% Similarity=0.138 Sum_probs=44.7
Q ss_pred CCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC----CCccceEEeCCHHHHHHHHHH
Q 023990 183 WDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP----KKTSASYSLREPDEVMDFLQK 258 (274)
Q Consensus 183 ~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~----~~~~A~~~~~~~~~v~~~L~~ 258 (274)
..|..+++.+.. .++ .++++|||.||++|.+.+ ++.++-+... ....+....++..+|..+|++
T Consensus 143 ~~K~~~l~~~~~----~~~---~~i~iGDg~~D~~~a~~A-----d~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~ 210 (214)
T TIGR03333 143 CCKPSLIRKLSE----PND---YHIVIGDSVTDVEAAKQS-----DLCFARDYLLNECEELGLNHAPFQDFYDVRKELEN 210 (214)
T ss_pred CCHHHHHHHHhh----cCC---cEEEEeCCHHHHHHHHhC-----CeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHH
Confidence 458888877643 222 699999999999999987 7766644211 112233335778888888876
Q ss_pred HHh
Q 023990 259 LVR 261 (274)
Q Consensus 259 l~~ 261 (274)
..+
T Consensus 211 ~~~ 213 (214)
T TIGR03333 211 VKE 213 (214)
T ss_pred Hhc
Confidence 653
No 144
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=95.66 E-value=0.0037 Score=52.42 Aligned_cols=53 Identities=17% Similarity=0.080 Sum_probs=39.2
Q ss_pred CCcEEEEEecCccccCCccC------------C---------CcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhh
Q 023990 11 GKQIVMFLDYDGTLSPIVEN------------P---------DRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK 63 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~~~------------~---------~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~ 63 (274)
.++..|+||+|+|++..... + .....-|.+.+.++.+.+++ .|+++|||+...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQ 144 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTC
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchh
Confidence 57889999999998851100 0 12234456889999999996 899999999774
No 145
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=95.63 E-value=0.013 Score=48.41 Aligned_cols=43 Identities=21% Similarity=0.080 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecC
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK 235 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~n 235 (274)
|..|-..++..+ +.+.. ...+.|||.||+|||+.+ +.+++|..
T Consensus 160 g~~Kv~rl~~~~---~~~~~---~~~aYsDS~~D~pmL~~a-----~~~~~Vnp 202 (210)
T TIGR01545 160 GHEKVAQLEQKI---GSPLK---LYSGYSDSKQDNPLLAFC-----EHRWRVSK 202 (210)
T ss_pred ChHHHHHHHHHh---CCChh---heEEecCCcccHHHHHhC-----CCcEEECc
Confidence 456666665554 43322 578999999999999999 78888864
No 146
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.62 E-value=0.016 Score=51.73 Aligned_cols=48 Identities=27% Similarity=0.300 Sum_probs=38.5
Q ss_pred CcEEEEEecCccccCCc------cCCCcCCCChHHHHHHHHHhhcC-CEEEEcCC
Q 023990 12 KQIVMFLDYDGTLSPIV------ENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGR 59 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~------~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR 59 (274)
+++++++|.||||.... ..+++..+.|...++|.+|++++ .++|+|..
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 46899999999999742 12234567889999999999885 89999985
No 147
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=95.54 E-value=0.016 Score=47.94 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=25.0
Q ss_pred CCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 35 FMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 35 ~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
.+.|.+.+.|+.|++++ .++|+||.....+.+++
T Consensus 70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il 104 (214)
T TIGR03333 70 EIREGFREFVAFINEHGIPFYVISGGMDFFVYPLL 104 (214)
T ss_pred cccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH
Confidence 45566677788887774 78888988877776654
No 148
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=95.47 E-value=0.011 Score=48.98 Aligned_cols=15 Identities=40% Similarity=0.775 Sum_probs=13.1
Q ss_pred cEEEEEecCccccCC
Q 023990 13 QIVMFLDYDGTLSPI 27 (274)
Q Consensus 13 ~~li~~DlDGTL~~~ 27 (274)
+++|+|||||||+..
T Consensus 3 ~~~vifDfDgTi~~~ 17 (219)
T PRK09552 3 SIQIFCDFDGTITNN 17 (219)
T ss_pred CcEEEEcCCCCCCcc
Confidence 568999999999984
No 149
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=95.44 E-value=0.011 Score=48.39 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=27.4
Q ss_pred HHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 188 ALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 188 al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.+..+++.++.++. .++++||+.||.+|++.+
T Consensus 183 ~~~~~i~~l~~~~~---~v~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 183 IFLRIIKELQVKPG---EVAMVGDGVNDAPALKAA 214 (215)
T ss_dssp HHHHHHHHHTCTGG---GEEEEESSGGHHHHHHHS
T ss_pred hHHHHHHHHhcCCC---EEEEEccCHHHHHHHHhC
Confidence 66778888887665 799999999999999986
No 150
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=95.38 E-value=0.037 Score=45.05 Aligned_cols=59 Identities=12% Similarity=0.062 Sum_probs=44.2
Q ss_pred cCCcEEEEEecCccccCCccCC--CcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 10 KGKQIVMFLDYDGTLSPIVENP--DRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~--~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
+..++++++|||+||+...... .....-|-+.+-|+.+.+...|+|=|..+...+...+
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l 78 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKM 78 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHH
Confidence 5677999999999999753111 1123478899999999998888888888877766644
No 151
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.34 E-value=0.026 Score=56.77 Aligned_cols=59 Identities=25% Similarity=0.376 Sum_probs=46.8
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecC-CC--CCccceEEe
Q 023990 173 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK-FP--KKTSASYSL 246 (274)
Q Consensus 173 ~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~n-a~--~~~~A~~~~ 246 (274)
-|-.+.|. .|..-++.|.+. |. .|.+.||+-||.+|++.+ ..||+|+. +. .+.+|+.++
T Consensus 618 VfARvsP~---qK~~IV~~lq~~-g~------vVamtGDGvNDapALk~A-----DVGIamg~~Gtdaak~Aadivl 679 (917)
T COG0474 618 VFARVSPE---QKARIVEALQKS-GH------VVAMTGDGVNDAPALKAA-----DVGIAMGGEGTDAAKEAADIVL 679 (917)
T ss_pred EEEEcCHH---HHHHHHHHHHhC-CC------EEEEeCCCchhHHHHHhc-----CccEEecccHHHHHHhhcceEe
Confidence 45567777 899988888776 53 699999999999999999 79999885 32 246777775
No 152
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=95.33 E-value=0.042 Score=37.25 Aligned_cols=57 Identities=32% Similarity=0.308 Sum_probs=41.5
Q ss_pred HHHHHHHHHcCcCCCCCeeEEEEcCC-cCCHHHHHHHHhCCCc-eEEEecCCC--CC------ccceEEeCCHHH
Q 023990 187 KALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQG-FGILVSKFP--KK------TSASYSLREPDE 251 (274)
Q Consensus 187 ~al~~l~~~~~~~~~~~~~vi~~GDs-~ND~~M~~~~~~~~~g-~~v~v~na~--~~------~~A~~~~~~~~~ 251 (274)
..+..+++.++++++ +++++||+ ..|+.+=+.+ | .+|.|..+. .. ..+++++++..+
T Consensus 8 ~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~a~~~-----G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 8 GMLEQALKRLGVDPS---RCVMVGDSLETDIEAAKAA-----GIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp HHHHHHHHHHTSGGG---GEEEEESSTTTHHHHHHHT-----TSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHHHHHHHcCCCHH---HEEEEcCCcHhHHHHHHHc-----CCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 356777888888876 89999999 9999998887 5 467776542 11 357788776543
No 153
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=95.30 E-value=0.06 Score=46.05 Aligned_cols=71 Identities=11% Similarity=-0.062 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHcCcC-CCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCC------------------------
Q 023990 185 KGKALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK------------------------ 238 (274)
Q Consensus 185 Kg~al~~l~~~~~~~-~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~------------------------ 238 (274)
+...+..+++.+|+. ++ ++++|||+.+|+.+=+.+ |. +|.+..+..
T Consensus 160 ~p~~~~~a~~~l~~~~~~---e~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T PRK13478 160 YPWMALKNAIELGVYDVA---ACVKVDDTVPGIEEGLNA-----GMWTVGVILSGNELGLSEEEYQALSAAELAARRERA 231 (267)
T ss_pred ChHHHHHHHHHcCCCCCc---ceEEEcCcHHHHHHHHHC-----CCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHH
Confidence 356788888999985 44 799999999998887776 54 444543211
Q ss_pred -----CccceEEeCCHHHHHHHHHHHHhhh
Q 023990 239 -----KTSASYSLREPDEVMDFLQKLVRWK 263 (274)
Q Consensus 239 -----~~~A~~~~~~~~~v~~~L~~l~~~~ 263 (274)
+.-|++++++..++..+|+.+..-+
T Consensus 232 ~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 232 RARLRAAGAHYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred HHHHHHcCCCeehhhHHHHHHHHHHHHHHH
Confidence 1347889999999988887765544
No 154
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=95.29 E-value=0.04 Score=45.90 Aligned_cols=29 Identities=24% Similarity=0.126 Sum_probs=21.3
Q ss_pred HHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 191 FLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 191 ~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
..++.+|++++ ++++|.||.+.+..-+++
T Consensus 150 ~Aa~~Lgv~P~---~CvviEDs~~Gi~Aa~aA 178 (221)
T COG0637 150 LAAERLGVDPE---ECVVVEDSPAGIQAAKAA 178 (221)
T ss_pred HHHHHcCCChH---HeEEEecchhHHHHHHHC
Confidence 33455666665 788899998888877777
No 155
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=95.26 E-value=0.038 Score=45.71 Aligned_cols=16 Identities=31% Similarity=0.312 Sum_probs=13.8
Q ss_pred CCcEEEEEecCccccC
Q 023990 11 GKQIVMFLDYDGTLSP 26 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~ 26 (274)
.+.++++||+||||++
T Consensus 4 ~~~~~iiFD~DGTL~d 19 (226)
T PRK13222 4 MDIRAVAFDLDGTLVD 19 (226)
T ss_pred CcCcEEEEcCCccccc
Confidence 3467999999999996
No 156
>PLN03190 aminophospholipid translocase; Provisional
Probab=95.23 E-value=0.023 Score=58.47 Aligned_cols=59 Identities=14% Similarity=0.275 Sum_probs=41.3
Q ss_pred EEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC---CCccceEEeCC
Q 023990 176 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP---KKTSASYSLRE 248 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~---~~~~A~~~~~~ 248 (274)
.++|. .|+.-++.+.+..+. .++++||+.||.+|++.| ..||.+.... ...+|++.++.
T Consensus 853 R~sP~---QKa~IV~~vk~~~~~------vtlaIGDGaNDv~mIq~A-----dVGIGIsG~EG~qA~~aSDfaI~~ 914 (1178)
T PLN03190 853 RVAPL---QKAGIVALVKNRTSD------MTLAIGDGANDVSMIQMA-----DVGVGISGQEGRQAVMASDFAMGQ 914 (1178)
T ss_pred cCCHH---HHHHHHHHHHhcCCc------EEEEECCCcchHHHHHhc-----CeeeeecCchhHHHHHhhccchhh
Confidence 45666 798888877665431 589999999999999999 5677543322 12467776644
No 157
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=95.15 E-value=0.042 Score=46.86 Aligned_cols=53 Identities=19% Similarity=0.219 Sum_probs=38.6
Q ss_pred CCcEEEEEecCccccC---------CccCC------C-------cCCCChHHHHHHHHHhhcC-CEEEEcCCCHhh
Q 023990 11 GKQIVMFLDYDGTLSP---------IVENP------D-------RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK 63 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~---------~~~~~------~-------~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~ 63 (274)
..+-++++|+|+|++. ....+ + .+..-|.+++..+.|++++ .|+++|||+-..
T Consensus 99 ~~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 99 HEKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 3467899999999993 10000 1 3344678899999999995 899999998654
No 158
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=95.08 E-value=0.043 Score=45.48 Aligned_cols=61 Identities=18% Similarity=0.032 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCC-----CccceEEeCCHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK-----KTSASYSLREPDEV 252 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~-----~~~A~~~~~~~~~v 252 (274)
.+...++.+++.+|++++ ++++|||+.+|+++-+.+ |. +|.+..... ...|++++.+..++
T Consensus 149 p~~~~~~~~~~~~~~~~~---~~~~igDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPL---TCVALEDSFNGMIAAKAA-----RMRSIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CCHHHHHHHHHHcCCCHH---HeEEEcCChhhHHHHHHc-----CCEEEEecCCccCchhhhhhhheeccCHHHH
Confidence 456789999999999876 899999999999999988 64 445543321 12567777776664
No 159
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=94.90 E-value=0.085 Score=42.29 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=35.8
Q ss_pred CcEEEEEecCccccCCcc----CCCcCCCChHHHHHHHHHhhcC-CEEEEcCCC
Q 023990 12 KQIVMFLDYDGTLSPIVE----NPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRC 60 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~----~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~ 60 (274)
..|+++||.||||..... ......+-+.+.++|++|++.+ .++|+|..+
T Consensus 2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred CccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 368999999999875321 1122345677899999999885 788888765
No 160
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=94.84 E-value=0.054 Score=42.77 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=41.7
Q ss_pred cEEEEEecCccccCCccCCCc-------------------CCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 13 QIVMFLDYDGTLSPIVENPDR-------------------AFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~-------------------~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
++.+++|||+||+.....+.. ...-|.+.+.|..|.+...++|.|.-+...+..++
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il 75 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVL 75 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHH
Confidence 457999999999974432211 12457889999999887789999888887777665
No 161
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=94.82 E-value=0.016 Score=46.61 Aligned_cols=36 Identities=11% Similarity=-0.015 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
-+-..+..+++.++++++ +++.|||+..|++.=+.+
T Consensus 143 P~p~~~~~~~~~~~~~~~---~~l~igDs~~di~aA~~a 178 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPT---QCVVFEDADFGIQAARAA 178 (188)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeccHhhHHHHHHC
Confidence 456778999999998765 799999999998877666
No 162
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=94.76 E-value=0.045 Score=44.82 Aligned_cols=31 Identities=10% Similarity=-0.036 Sum_probs=16.7
Q ss_pred ChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhh
Q 023990 37 SGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF 67 (274)
Q Consensus 37 ~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~ 67 (274)
-+.+.++|+.|++++ .++|+|+.+...+...
T Consensus 87 ~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~ 118 (213)
T TIGR01449 87 FPGVEATLGALRAKGLRLGLVTNKPTPLARPL 118 (213)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH
Confidence 344455555565553 5666666655554443
No 163
>PLN02940 riboflavin kinase
Probab=94.75 E-value=0.061 Score=48.66 Aligned_cols=30 Identities=17% Similarity=0.186 Sum_probs=21.8
Q ss_pred hHHHHHHHHHhhcC-CEEEEcCCCHhhHHhh
Q 023990 38 GKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF 67 (274)
Q Consensus 38 ~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~ 67 (274)
+.+.+.|+.|++++ .++|+|+.+...+...
T Consensus 96 pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~ 126 (382)
T PLN02940 96 PGANRLIKHLKSHGVPMALASNSPRANIEAK 126 (382)
T ss_pred cCHHHHHHHHHHCCCcEEEEeCCcHHHHHHH
Confidence 44566778887774 8899999887766544
No 164
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=94.74 E-value=0.033 Score=45.33 Aligned_cols=32 Identities=13% Similarity=0.004 Sum_probs=19.8
Q ss_pred CChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhh
Q 023990 36 MSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF 67 (274)
Q Consensus 36 i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~ 67 (274)
+.+.+.+.|+.+++++ .++|+||.+...++.+
T Consensus 88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~ 120 (202)
T TIGR01490 88 LYPEARDLIRWHKAEGHTIVLVSASLTILVKPL 120 (202)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH
Confidence 4555566666666664 6777777766555544
No 165
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=94.68 E-value=0.061 Score=42.88 Aligned_cols=37 Identities=27% Similarity=0.202 Sum_probs=29.1
Q ss_pred eCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 178 RPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 178 ~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.+- |.+|+..++.+.+.+. -++.+|||..|++.-+..
T Consensus 142 s~f-G~dK~~vI~~l~e~~e-------~~fy~GDsvsDlsaakls 178 (220)
T COG4359 142 SQF-GHDKSSVIHELSEPNE-------SIFYCGDSVSDLSAAKLS 178 (220)
T ss_pred ccc-CCCcchhHHHhhcCCc-------eEEEecCCcccccHhhhh
Confidence 456 8999999999877543 599999999998765544
No 166
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=94.59 E-value=0.045 Score=43.79 Aligned_cols=16 Identities=31% Similarity=0.573 Sum_probs=13.4
Q ss_pred cEEEEEecCccccCCc
Q 023990 13 QIVMFLDYDGTLSPIV 28 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~ 28 (274)
+-+++||+||||++..
T Consensus 1 ~~~iiFD~dgTL~~~~ 16 (188)
T TIGR01489 1 KVVVVSDFDGTITLND 16 (188)
T ss_pred CeEEEEeCCCcccCCC
Confidence 4589999999999853
No 167
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=94.50 E-value=0.0052 Score=49.23 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=32.4
Q ss_pred EEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 176 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
+-+.. +-.|+.+++.+++.++.. .++++||+.||++|..-+
T Consensus 152 ~ptsd-sggKa~~i~~lrk~~~~~-----~~~mvGDGatDlea~~pa 192 (227)
T KOG1615|consen 152 EPTSD-SGGKAEVIALLRKNYNYK-----TIVMVGDGATDLEAMPPA 192 (227)
T ss_pred Ccccc-CCccHHHHHHHHhCCChh-----eeEEecCCccccccCCch
Confidence 34456 668999999999955443 699999999999987654
No 168
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=94.43 E-value=0.19 Score=42.93 Aligned_cols=73 Identities=16% Similarity=0.069 Sum_probs=47.5
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCC-ChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhh---cCccC-ceEeccCcceE
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFM-SGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF---VKLAE-LYYAGSHGMDI 83 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i-~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~---~~~~~-~~li~~nG~~i 83 (274)
...+.+|++|+|.||+.... ...| .|...+.|.+|++.+ .+++=|--+.+-+..- +++++ +.+|-++|...
T Consensus 119 ~~~phVIVfDlD~TLItd~~---~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~ 195 (297)
T PF05152_consen 119 WEPPHVIVFDLDSTLITDEG---DVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKA 195 (297)
T ss_pred CCCCcEEEEECCCcccccCC---ccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccC
Confidence 67788999999999998542 2333 788999999999997 5555554445444432 34433 23455555544
Q ss_pred eC
Q 023990 84 KG 85 (274)
Q Consensus 84 ~~ 85 (274)
-.
T Consensus 196 ~~ 197 (297)
T PF05152_consen 196 GE 197 (297)
T ss_pred Cc
Confidence 43
No 169
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=94.38 E-value=0.11 Score=40.81 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=44.1
Q ss_pred cCCcEEEEEecCccccCCccCCC------------------------------cCCCChHHHHHHHHHhhcCCEEEEcCC
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPD------------------------------RAFMSGKMRRAVRQLAKYFPTAIVTGR 59 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~------------------------------~~~i~~~~~~al~~L~~~~~v~i~TGR 59 (274)
..++..+++|||.||+.....+. ...+-|.+.+.|++|++...++|+|..
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 56788999999999997332210 011257889999999877789999999
Q ss_pred CHhhHHhhc
Q 023990 60 CRDKVYDFV 68 (274)
Q Consensus 60 ~~~~l~~~~ 68 (274)
+...+..++
T Consensus 83 ~~~yA~~vl 91 (156)
T TIGR02250 83 TRAYAQAIA 91 (156)
T ss_pred cHHHHHHHH
Confidence 988777665
No 170
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=94.30 E-value=0.043 Score=44.00 Aligned_cols=45 Identities=27% Similarity=0.219 Sum_probs=32.1
Q ss_pred cEEEEEecCccccCCcc----CCCcCCCChHHHHHHHHHhhcC-CEEEEc
Q 023990 13 QIVMFLDYDGTLSPIVE----NPDRAFMSGKMRRAVRQLAKYF-PTAIVT 57 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~----~~~~~~i~~~~~~al~~L~~~~-~v~i~T 57 (274)
.+++|+|-||||-...+ ..++-.+.+.+.++|.+|++.+ .++++|
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvT 54 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVT 54 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEE
Confidence 67999999999986322 1123345677888998888775 677666
No 171
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=94.19 E-value=0.029 Score=47.16 Aligned_cols=44 Identities=20% Similarity=0.140 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCC-cCCHHHHHHHHhCCCce-EEEecC
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQGF-GILVSK 235 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs-~ND~~M~~~~~~~~~g~-~v~v~n 235 (274)
-+......+++.+|++++ +++.+||+ ..|+..=+.+ |. ++.+.+
T Consensus 164 P~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~i~v~~ 209 (238)
T PRK10748 164 PFSDMYHLAAEKLNVPIG---EILHVGDDLTTDVAGAIRC-----GMQACWINP 209 (238)
T ss_pred CcHHHHHHHHHHcCCChh---HEEEEcCCcHHHHHHHHHC-----CCeEEEEcC
Confidence 346678888889998876 79999999 5998876666 64 555543
No 172
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=94.13 E-value=0.026 Score=46.52 Aligned_cols=15 Identities=40% Similarity=0.532 Sum_probs=13.4
Q ss_pred CcEEEEEecCccccC
Q 023990 12 KQIVMFLDYDGTLSP 26 (274)
Q Consensus 12 ~~~li~~DlDGTL~~ 26 (274)
+.++|+||+||||++
T Consensus 2 ~~~~viFD~DGTL~d 16 (214)
T PRK13288 2 KINTVLFDLDGTLIN 16 (214)
T ss_pred CccEEEEeCCCcCcc
Confidence 357999999999998
No 173
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=94.06 E-value=0.079 Score=42.97 Aligned_cols=28 Identities=18% Similarity=0.056 Sum_probs=20.1
Q ss_pred CCChHHHHHHHHHhhcC-CEEEEcCCCHh
Q 023990 35 FMSGKMRRAVRQLAKYF-PTAIVTGRCRD 62 (274)
Q Consensus 35 ~i~~~~~~al~~L~~~~-~v~i~TGR~~~ 62 (274)
.+-+.+.++|++|.+.+ .++++|+|+..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 45667889999999886 78888888754
No 174
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=93.95 E-value=0.031 Score=48.46 Aligned_cols=60 Identities=18% Similarity=0.169 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCC--CCC--ccceEEeCCHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKF--PKK--TSASYSLREPDEV 252 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na--~~~--~~A~~~~~~~~~v 252 (274)
+...+..+++.+|++++ ++++|||+.+|+.+-+.+ |. .|.+... ..+ ..|++++++..++
T Consensus 204 ~p~~~~~a~~~~~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETLGVDPS---RCVVVEDSVIGLQAAKAA-----GMRCIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHhCcChH---HEEEEeCCHHhHHHHHHc-----CCEEEEEccCCccccccCCCcEEECChhhc
Confidence 35688899999999876 799999999999988887 65 4445332 122 3578888877653
No 175
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=93.86 E-value=0.083 Score=43.55 Aligned_cols=59 Identities=22% Similarity=0.241 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCc-CCHHHHHHHHhCCCce-EEEecCCCC-------CccceEEeCCHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKFPK-------KTSASYSLREPDE 251 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~na~~-------~~~A~~~~~~~~~ 251 (274)
+....+.+++.+|++++ ++++|||+. +|+.+=+.+ |+ +|.+..... ...+++++++..+
T Consensus 152 ~~~~~~~~~~~~~~~~~---~~~~igDs~~~di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~e 219 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPE---EAVMVGDRLDKDIKGAKNL-----GMKTVWINQGKSSKMEDDVYPYPDYEISSLRE 219 (221)
T ss_pred CHHHHHHHHHHcCCChh---hEEEECCChHHHHHHHHHC-----CCEEEEECCCCCcccccccccCCCeeeCcHHh
Confidence 45678899999999876 799999998 998888877 65 566654321 1235566666554
No 176
>PRK11587 putative phosphatase; Provisional
Probab=93.83 E-value=0.029 Score=46.39 Aligned_cols=60 Identities=17% Similarity=0.055 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCC---CccceEEeCCHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK---KTSASYSLREPDEV 252 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~---~~~A~~~~~~~~~v 252 (274)
+......+++.+|++++ +++.|||+.+|+..=+.+ |. +|.+.+... ...+++++++..++
T Consensus 140 ~p~~~~~~~~~~g~~p~---~~l~igDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQ---ECVVVEDAPAGVLSGLAA-----GCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHcCCCcc---cEEEEecchhhhHHHHHC-----CCEEEEECCCCchhhhccCCEEecchhhe
Confidence 45677888899999886 899999999998877766 64 667765432 13567777776653
No 177
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=93.83 E-value=0.12 Score=46.52 Aligned_cols=69 Identities=16% Similarity=0.153 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCC-C--ccceEEeCCHHHH-HHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK-K--TSASYSLREPDEV-MDFLQKL 259 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~-~--~~A~~~~~~~~~v-~~~L~~l 259 (274)
+...+..+++.+|+.++ ++++|||+.+|+..=+.+ |. .|.+..... . ..|++++++.+++ ...++.|
T Consensus 274 ~Peifl~A~~~lgl~Pe---ecl~IGDS~~DIeAAk~A-----Gm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l 345 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPE---RCIVFGNSNQTVEAAHDA-----RMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNL 345 (381)
T ss_pred CHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHc-----CCEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhh
Confidence 35667777888888876 799999999998877776 54 555654322 1 3588899999886 4566666
Q ss_pred Hh
Q 023990 260 VR 261 (274)
Q Consensus 260 ~~ 261 (274)
+.
T Consensus 346 ~~ 347 (381)
T PLN02575 346 AD 347 (381)
T ss_pred hh
Confidence 54
No 178
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=93.80 E-value=0.12 Score=43.03 Aligned_cols=68 Identities=13% Similarity=0.126 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce--EEEecCCCC--CccceEEeCCHHHHHHHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF--GILVSKFPK--KTSASYSLREPDEVMDFLQKLV 260 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~--~v~v~na~~--~~~A~~~~~~~~~v~~~L~~l~ 260 (274)
+....+.+++.+|++++ ++++|||+.+|+..=+.+ |. .+.|.++.. ...+..+..+.+.+...|+.|.
T Consensus 151 ~p~~~~~~~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAE---RTLFIDDSEPILDAAAQF-----GIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred CHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHc-----CCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence 46688899999999886 799999999997766665 65 345665432 2344445567777777776654
No 179
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.72 E-value=0.14 Score=50.19 Aligned_cols=69 Identities=19% Similarity=0.232 Sum_probs=52.9
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEe--CC
Q 023990 173 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSL--RE 248 (274)
Q Consensus 173 ~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~--~~ 248 (274)
-+-|+.|. .|..-++.|.+.-+ -++..||+.||-|.|..+ ..||+++.+.. .++|+.++ ++
T Consensus 765 V~aev~P~---~K~~~Ik~lq~~~~-------~VaMVGDGINDaPALA~A-----dVGIaig~gs~vAieaADIVLmrn~ 829 (951)
T KOG0207|consen 765 VYAEVLPE---QKAEKIKEIQKNGG-------PVAMVGDGINDAPALAQA-----DVGIAIGAGSDVAIEAADIVLMRND 829 (951)
T ss_pred EEeccCch---hhHHHHHHHHhcCC-------cEEEEeCCCCccHHHHhh-----ccceeeccccHHHHhhCCEEEEccc
Confidence 44578888 89999999887643 499999999999999998 68999987643 26788876 45
Q ss_pred HHHHHHHH
Q 023990 249 PDEVMDFL 256 (274)
Q Consensus 249 ~~~v~~~L 256 (274)
-.+|...+
T Consensus 830 L~~v~~ai 837 (951)
T KOG0207|consen 830 LRDVPFAI 837 (951)
T ss_pred hhhhHHHH
Confidence 55555444
No 180
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=93.72 E-value=0.11 Score=41.95 Aligned_cols=39 Identities=13% Similarity=0.226 Sum_probs=32.0
Q ss_pred cCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhh---cCcc
Q 023990 33 RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF---VKLA 71 (274)
Q Consensus 33 ~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~---~~~~ 71 (274)
..+++|..++...+|++.+ .++++||--...+.+. +++|
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~ 128 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP 128 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc
Confidence 4568999999999999996 8999999887776664 4554
No 181
>PRK06769 hypothetical protein; Validated
Probab=93.67 E-value=0.11 Score=41.45 Aligned_cols=64 Identities=20% Similarity=0.125 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCC------------CccceEEeCCHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK------------KTSASYSLREPDE 251 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~------------~~~A~~~~~~~~~ 251 (274)
+...+..+++.++.+++ +++++||+.+|+..=+.+ |+ +|.+..+.. ...+++++.+..+
T Consensus 95 ~p~~~~~~~~~l~~~p~---~~i~IGD~~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e 166 (173)
T PRK06769 95 STGMLLQAAEKHGLDLT---QCAVIGDRWTDIVAAAKV-----NATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFED 166 (173)
T ss_pred CHHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHC-----CCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHH
Confidence 35567788888998776 799999999998877776 64 445543211 1235566777777
Q ss_pred HHHHH
Q 023990 252 VMDFL 256 (274)
Q Consensus 252 v~~~L 256 (274)
+..+|
T Consensus 167 l~~~l 171 (173)
T PRK06769 167 AVNWI 171 (173)
T ss_pred HHHHH
Confidence 66553
No 182
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=93.65 E-value=0.035 Score=47.01 Aligned_cols=60 Identities=10% Similarity=0.100 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCC-----CccceEEeCCHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK-----KTSASYSLREPDE 251 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~-----~~~A~~~~~~~~~ 251 (274)
-+...+..+++.++++++ +++.|||+..|+..=+.+ |. .|.+..... ...|++++++..+
T Consensus 165 P~p~~~~~a~~~~~~~~~---~~l~vgDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKD---HTFVFEDSVSGIKAGVAA-----GMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CChHHHHHHHHHhCCChh---HEEEEcCCHHHHHHHHHC-----CCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 445778899999999876 799999999998877776 64 444543211 1357888888776
No 183
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=93.63 E-value=0.19 Score=42.91 Aligned_cols=71 Identities=14% Similarity=0.069 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCC-C--CccceEEeCCHHHHHHHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP-K--KTSASYSLREPDEVMDFLQKLV 260 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~-~--~~~A~~~~~~~~~v~~~L~~l~ 260 (274)
+...+..+++++|++++ ++++|||+.+|+..=+.+ |. +|++.+.. . ...|++++++..++..++-.-+
T Consensus 167 ~Pe~~~~a~~~l~~~p~---~~l~IgDs~~Di~aA~~a-----G~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~ 238 (260)
T PLN03243 167 DPEMFMYAAERLGFIPE---RCIVFGNSNSSVEAAHDG-----CMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNL 238 (260)
T ss_pred CHHHHHHHHHHhCCChH---HeEEEcCCHHHHHHHHHc-----CCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhh
Confidence 46788899999999886 799999999998877776 64 44554321 1 1357888999888665554444
Q ss_pred hhh
Q 023990 261 RWK 263 (274)
Q Consensus 261 ~~~ 263 (274)
+.+
T Consensus 239 ~~~ 241 (260)
T PLN03243 239 SDL 241 (260)
T ss_pred hcc
Confidence 433
No 184
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=93.58 E-value=0.15 Score=49.57 Aligned_cols=60 Identities=23% Similarity=0.240 Sum_probs=46.2
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEec-CCC--CCccceEEeC
Q 023990 173 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVS-KFP--KKTSASYSLR 247 (274)
Q Consensus 173 ~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~-na~--~~~~A~~~~~ 247 (274)
.|.-+.|+ .|-.-++.|.+.-. .+..-||+.||-|.|+.+ ..||||| ++. .|++|+.++.
T Consensus 657 vFaR~~P~---HK~kIVeaLq~~ge-------ivAMTGDGVNDApALK~A-----dIGIAMG~~GTdVaKeAsDMVL~ 719 (972)
T KOG0202|consen 657 VFARAEPQ---HKLKIVEALQSRGE-------VVAMTGDGVNDAPALKKA-----DIGIAMGISGTDVAKEASDMVLA 719 (972)
T ss_pred EEEecCch---hHHHHHHHHHhcCC-------EEEecCCCccchhhhhhc-----ccceeecCCccHhhHhhhhcEEe
Confidence 44556677 88888888766532 578889999999999999 7999999 554 3578888763
No 185
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=93.58 E-value=0.17 Score=42.79 Aligned_cols=35 Identities=17% Similarity=-0.080 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHcCcC-CCCCeeEEEEcCCcCCHHHHHHH
Q 023990 185 KGKALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 185 Kg~al~~l~~~~~~~-~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
+-..+..+++.+|+. ++ ++++|||+.+|+.+=+.+
T Consensus 158 ~p~~~~~a~~~l~~~~~~---~~l~IGDs~~Di~aA~~a 193 (253)
T TIGR01422 158 APWMALKNAIELGVYDVA---ACVKVGDTVPDIEEGRNA 193 (253)
T ss_pred CHHHHHHHHHHcCCCCch---heEEECCcHHHHHHHHHC
Confidence 346778888899984 65 799999999998887776
No 186
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=93.56 E-value=0.25 Score=44.57 Aligned_cols=17 Identities=6% Similarity=0.227 Sum_probs=14.4
Q ss_pred cCCcEEEEEecCccccC
Q 023990 10 KGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~ 26 (274)
...-+.++||+||||++
T Consensus 128 ~~~~~~VIFDlDGTLID 144 (381)
T PLN02575 128 GCGWLGAIFEWEGVIIE 144 (381)
T ss_pred cCCCCEEEEcCcCccee
Confidence 34568899999999998
No 187
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.47 E-value=0.05 Score=44.31 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=28.5
Q ss_pred HHHHHHHHHHcCcCCCCCeeEEEEcCCc-CCHHHHHHH
Q 023990 186 GKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKIL 222 (274)
Q Consensus 186 g~al~~l~~~~~~~~~~~~~vi~~GDs~-ND~~M~~~~ 222 (274)
....+++++.+|++++ +++.+||+. +|+..=+.+
T Consensus 163 ~~~~~~~~~~~~~~~~---~~~~IgD~~~~Di~~A~~a 197 (203)
T TIGR02252 163 PKIFQEALERAGISPE---EALHIGDSLRNDYQGARAA 197 (203)
T ss_pred HHHHHHHHHHcCCChh---HEEEECCCchHHHHHHHHc
Confidence 4578889999999876 899999997 898877665
No 188
>PRK11590 hypothetical protein; Provisional
Probab=93.43 E-value=0.042 Score=45.31 Aligned_cols=15 Identities=47% Similarity=0.809 Sum_probs=13.6
Q ss_pred CcEEEEEecCccccC
Q 023990 12 KQIVMFLDYDGTLSP 26 (274)
Q Consensus 12 ~~~li~~DlDGTL~~ 26 (274)
++++++|||||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 678999999999995
No 189
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=93.28 E-value=0.041 Score=44.72 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFK 220 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~ 220 (274)
+-..+..+++.+|++++ +++.|||+.+|+.+=+
T Consensus 163 ~p~~~~~~~~~~~~~~~---~~i~vGD~~~Di~aA~ 195 (197)
T TIGR01548 163 NPEPLILAAKALGVEAC---HAAMVGDTVDDIITGR 195 (197)
T ss_pred CHHHHHHHHHHhCcCcc---cEEEEeCCHHHHHHHH
Confidence 35667888899999876 7999999999987543
No 190
>PRK11587 putative phosphatase; Provisional
Probab=93.16 E-value=0.23 Score=41.01 Aligned_cols=15 Identities=33% Similarity=0.474 Sum_probs=13.3
Q ss_pred CcEEEEEecCccccC
Q 023990 12 KQIVMFLDYDGTLSP 26 (274)
Q Consensus 12 ~~~li~~DlDGTL~~ 26 (274)
+.+.|+||+||||++
T Consensus 2 ~~k~viFDlDGTL~D 16 (218)
T PRK11587 2 RCKGFLFDLDGTLVD 16 (218)
T ss_pred CCCEEEEcCCCCcCc
Confidence 357899999999999
No 191
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=93.15 E-value=0.13 Score=42.37 Aligned_cols=64 Identities=16% Similarity=0.028 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHHcCcC-CCCCeeEEEEcCCcCCHHHHHHHHhCCCceEE--EecCC--CC----CccceEEeCCHHHHHH
Q 023990 184 DKGKALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKILRKREQGFGI--LVSKF--PK----KTSASYSLREPDEVMD 254 (274)
Q Consensus 184 sKg~al~~l~~~~~~~-~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v--~v~na--~~----~~~A~~~~~~~~~v~~ 254 (274)
-+...++.+++.++++ ++ ++++|||+.+|+.+-+.+ |..+ .+... .. ...+++++++..++..
T Consensus 146 P~p~~~~~a~~~~~~~~~~---~~~~igD~~~Di~aa~~a-----G~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQ---SVAVAGDTPNDLEAGINA-----GAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred CCHHHHHHHHHHcCCCChh---HeEEeCCCHHHHHHHHHC-----CCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 3568889999999986 45 799999999999888887 6643 44332 11 1346778888777655
Q ss_pred H
Q 023990 255 F 255 (274)
Q Consensus 255 ~ 255 (274)
.
T Consensus 218 ~ 218 (220)
T TIGR03351 218 L 218 (220)
T ss_pred h
Confidence 4
No 192
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=93.11 E-value=0.047 Score=45.51 Aligned_cols=17 Identities=35% Similarity=0.351 Sum_probs=15.3
Q ss_pred cCCcEEEEEecCccccC
Q 023990 10 KGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~ 26 (274)
+.+.++|+|||||||++
T Consensus 7 ~~~~k~vIFDlDGTL~d 23 (224)
T PRK14988 7 WQDVDTVLLDMDGTLLD 23 (224)
T ss_pred cccCCEEEEcCCCCccc
Confidence 55678999999999999
No 193
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=93.05 E-value=0.061 Score=44.39 Aligned_cols=14 Identities=29% Similarity=0.337 Sum_probs=12.7
Q ss_pred cEEEEEecCccccC
Q 023990 13 QIVMFLDYDGTLSP 26 (274)
Q Consensus 13 ~~li~~DlDGTL~~ 26 (274)
.++|+||+||||++
T Consensus 1 ~k~iiFD~DGTL~d 14 (220)
T TIGR03351 1 ISLVVLDMAGTTVD 14 (220)
T ss_pred CcEEEEecCCCeec
Confidence 47899999999998
No 194
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=93.05 E-value=0.046 Score=43.66 Aligned_cols=35 Identities=17% Similarity=0.098 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
+...++.+++.++++++ ++++|||+.+|+++=+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~---~~v~IgD~~~di~aA~~~ 178 (185)
T TIGR02009 144 HPETFLLAAELLGVSPN---ECVVFEDALAGVQAARAA 178 (185)
T ss_pred ChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC
Confidence 44577888999998875 799999999998887776
No 195
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=92.83 E-value=0.2 Score=47.03 Aligned_cols=55 Identities=27% Similarity=0.373 Sum_probs=42.1
Q ss_pred EEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeC
Q 023990 175 MEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLR 247 (274)
Q Consensus 175 iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~~~A~~~~~ 247 (274)
-++.|. .|...++.+.+. | . .++++||+.||.+|++.+ ++||+|+ .+..|+.++-
T Consensus 388 ~~~~p~---~K~~~v~~l~~~-g---~---~v~~vGDg~nD~~al~~A-----dvgia~~---a~~~adivl~ 442 (499)
T TIGR01494 388 ARVTPE---EKAALVEALQKK-G---R---VVAMTGDGVNDAPALKKA-----DVGIAMG---AKAAADIVLL 442 (499)
T ss_pred eccCHH---HHHHHHHHHHHC-C---C---EEEEECCChhhHHHHHhC-----CCccccc---hHHhCCeEEe
Confidence 345565 888888887543 2 2 699999999999999998 7889887 3556887763
No 196
>PHA02597 30.2 hypothetical protein; Provisional
Probab=92.80 E-value=0.051 Score=44.09 Aligned_cols=61 Identities=15% Similarity=0.080 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCC--CCccceEEeCCHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--KKTSASYSLREPDEV 252 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~--~~~~A~~~~~~~~~v 252 (274)
.|-..+..+++.+| ++ .+++|||+.+|+..=+.+- .|. +|.+..+. ......|.+++..++
T Consensus 131 ~kp~~~~~a~~~~~--~~---~~v~vgDs~~di~aA~~a~---~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~ 194 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DR---VVCFVDDLAHNLDAAHEAL---SQLPVIHMLRGERDHIPKLAHRVKSWNDI 194 (197)
T ss_pred ccHHHHHHHHHHhC--CC---cEEEeCCCHHHHHHHHHHH---cCCcEEEecchhhccccchhhhhccHHHH
Confidence 35678889999999 33 6999999999977665530 043 44554332 123444667776664
No 197
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=92.77 E-value=0.12 Score=44.45 Aligned_cols=59 Identities=17% Similarity=0.330 Sum_probs=41.7
Q ss_pred cCCcEEEEEecCccccCCcc-CC-----------CcCCCChHHHHHHHHHhhc-CCEEEEcCCCHhhHHhhc
Q 023990 10 KGKQIVMFLDYDGTLSPIVE-NP-----------DRAFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~-~~-----------~~~~i~~~~~~al~~L~~~-~~v~i~TGR~~~~l~~~~ 68 (274)
...+-.|++|||-||+.... +. ....++++.++.+++|.++ ..+=+-+..+.++=.+++
T Consensus 19 g~~~lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~m 90 (277)
T TIGR01544 19 GAAKLQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYPYM 90 (277)
T ss_pred ChhheEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhhHH
Confidence 34455699999999997541 10 1345788889999999888 477777777777655554
No 198
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.75 E-value=0.36 Score=40.49 Aligned_cols=78 Identities=27% Similarity=0.336 Sum_probs=48.8
Q ss_pred EeCCCCCCHHHHHHHHHHHc---CcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCC---------CCCccceE
Q 023990 177 IRPKIEWDKGKALEFLLECL---GFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKF---------PKKTSASY 244 (274)
Q Consensus 177 i~p~~~~sKg~al~~l~~~~---~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na---------~~~~~A~~ 244 (274)
.-|. +.-||..++.+++.. |.+.. .++.+||+.||.=....++. ..+.++=.+= +....|+.
T Consensus 144 ~C~~-NmCK~~il~~~~~~~~~~g~~~~---rviYiGDG~nD~Cp~~~L~~--~D~v~~R~~~~l~~~i~~~~~~~~a~v 217 (234)
T PF06888_consen 144 LCPP-NMCKGKILERLLQEQAQRGVPYD---RVIYIGDGRNDFCPALRLRP--RDVVFPRKGYPLHKLIQKNPGEVKAEV 217 (234)
T ss_pred cCCC-ccchHHHHHHHHHHHhhcCCCcc---eEEEECCCCCCcCcccccCC--CCEEecCCCChHHHHHhcCCCcceeEE
Confidence 3466 789999999999873 44433 89999999999865443321 1232222211 11234554
Q ss_pred Ee-CCHHHHHHHHHHHH
Q 023990 245 SL-REPDEVMDFLQKLV 260 (274)
Q Consensus 245 ~~-~~~~~v~~~L~~l~ 260 (274)
+. ++..++.+.|.+|+
T Consensus 218 ~~W~~g~~i~~~l~~~i 234 (234)
T PF06888_consen 218 VPWSSGEEILEILLQLI 234 (234)
T ss_pred EecCCHHHHHHHHHhhC
Confidence 43 67788888887763
No 199
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=92.53 E-value=0.1 Score=43.05 Aligned_cols=27 Identities=26% Similarity=0.448 Sum_probs=19.7
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHH
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAV 44 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al 44 (274)
.+++.+|||||||++.+ ..++-.+-++
T Consensus 4 ~~~la~FDfDgTLt~~d------s~~~fl~~~~ 30 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQD------MFGSFLRFLL 30 (210)
T ss_pred cCcEEEEcCCCCCccCc------cHHHHHHHHH
Confidence 67899999999999932 3445555555
No 200
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=92.53 E-value=0.12 Score=43.83 Aligned_cols=14 Identities=21% Similarity=0.351 Sum_probs=13.1
Q ss_pred cEEEEEecCccccC
Q 023990 13 QIVMFLDYDGTLSP 26 (274)
Q Consensus 13 ~~li~~DlDGTL~~ 26 (274)
.+.|+||+||||++
T Consensus 2 ~k~viFD~DGTLiD 15 (253)
T TIGR01422 2 IEAVIFDWAGTTVD 15 (253)
T ss_pred ceEEEEeCCCCeec
Confidence 57899999999999
No 201
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=92.51 E-value=0.11 Score=41.58 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
+-...+++++.+|++++ +++++||+..|+..=+.+
T Consensus 143 ~p~~~~~~~~~~~~~~~---~~l~vgD~~~di~aA~~~ 177 (184)
T TIGR01993 143 SPQAYEKALREAGVDPE---RAIFFDDSARNIAAAKAL 177 (184)
T ss_pred CHHHHHHHHHHhCCCcc---ceEEEeCCHHHHHHHHHc
Confidence 34678889999999876 799999999997766655
No 202
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=92.47 E-value=0.07 Score=44.29 Aligned_cols=15 Identities=33% Similarity=0.490 Sum_probs=13.6
Q ss_pred CcEEEEEecCccccC
Q 023990 12 KQIVMFLDYDGTLSP 26 (274)
Q Consensus 12 ~~~li~~DlDGTL~~ 26 (274)
..+.|+||+||||++
T Consensus 3 ~~~~iiFDlDGTL~D 17 (220)
T COG0546 3 MIKAILFDLDGTLVD 17 (220)
T ss_pred CCCEEEEeCCCcccc
Confidence 467899999999999
No 203
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=92.35 E-value=0.29 Score=41.44 Aligned_cols=17 Identities=29% Similarity=0.393 Sum_probs=14.9
Q ss_pred cCCcEEEEEecCccccC
Q 023990 10 KGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~ 26 (274)
-++.+.|+||+||||++
T Consensus 19 ~~~~k~viFDlDGTLiD 35 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCD 35 (248)
T ss_pred cCccCEEEEcCCCccCc
Confidence 45668999999999999
No 204
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=92.29 E-value=0.17 Score=43.26 Aligned_cols=18 Identities=11% Similarity=0.254 Sum_probs=15.6
Q ss_pred ccCCcEEEEEecCccccC
Q 023990 9 SKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 9 ~~~~~~li~~DlDGTL~~ 26 (274)
.....++|+|||||||++
T Consensus 20 ~~~~~k~vIFDlDGTLvD 37 (260)
T PLN03243 20 LGCGWLGVVLEWEGVIVE 37 (260)
T ss_pred hcCCceEEEEeCCCceeC
Confidence 356679999999999998
No 205
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=92.18 E-value=0.077 Score=43.97 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=15.0
Q ss_pred cCCcEEEEEecCccccC
Q 023990 10 KGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~ 26 (274)
....+.|+||+||||++
T Consensus 4 ~~~~k~iiFD~DGTL~d 20 (222)
T PRK10826 4 PRQILAAIFDMDGLLID 20 (222)
T ss_pred cccCcEEEEcCCCCCCc
Confidence 44688999999999998
No 206
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=92.12 E-value=0.31 Score=40.12 Aligned_cols=15 Identities=33% Similarity=0.456 Sum_probs=13.3
Q ss_pred cEEEEEecCccccCC
Q 023990 13 QIVMFLDYDGTLSPI 27 (274)
Q Consensus 13 ~~li~~DlDGTL~~~ 27 (274)
.+.++||+||||++.
T Consensus 2 ~~~viFDlDGTL~ds 16 (221)
T TIGR02253 2 IKAIFFDLDDTLIDT 16 (221)
T ss_pred ceEEEEeCCCCCcCC
Confidence 578999999999993
No 207
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=92.09 E-value=0.14 Score=43.79 Aligned_cols=16 Identities=25% Similarity=0.412 Sum_probs=14.0
Q ss_pred CcEEEEEecCccccCC
Q 023990 12 KQIVMFLDYDGTLSPI 27 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~ 27 (274)
+.+.|+||+||||++.
T Consensus 3 ~~k~vIFDlDGTLiDs 18 (267)
T PRK13478 3 KIQAVIFDWAGTTVDF 18 (267)
T ss_pred ceEEEEEcCCCCeecC
Confidence 4689999999999993
No 208
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=92.04 E-value=0.093 Score=43.25 Aligned_cols=63 Identities=19% Similarity=0.322 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHc-CcCCCCCeeEEEEcCCc-CCHHHHHHHHhCCCce-EEEecCC--C-C-CccceEEeCCHHHHHHH
Q 023990 185 KGKALEFLLECL-GFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKF--P-K-KTSASYSLREPDEVMDF 255 (274)
Q Consensus 185 Kg~al~~l~~~~-~~~~~~~~~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~na--~-~-~~~A~~~~~~~~~v~~~ 255 (274)
+....+.+++.+ +++++ +++++||+. +|+..=+.+ |. +|.+... . . ...+++++++..++..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~---~~v~igD~~~~di~~A~~~-----G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKE---EVLMIGDSLTADIKGGQNA-----GLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEI 223 (224)
T ss_pred CHHHHHHHHHHhcCCCch---heEEECCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCceEECCHHHHHhh
Confidence 456788888898 98876 799999998 898887776 65 3444322 1 1 23567788888887654
No 209
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=92.00 E-value=0.16 Score=51.72 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 183 WDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 183 ~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.-|+..++.+.+..+. .++||||+.||.+|++.+
T Consensus 780 lQKA~Vv~lVk~~~~~------~TLAIGDGANDVsMIQ~A 813 (1151)
T KOG0206|consen 780 LQKALVVKLVKKGLKA------VTLAIGDGANDVSMIQEA 813 (1151)
T ss_pred HHHHHHHHHHHhcCCc------eEEEeeCCCccchheeeC
Confidence 3789888888555443 699999999999999987
No 210
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=91.94 E-value=0.13 Score=44.21 Aligned_cols=32 Identities=25% Similarity=0.282 Sum_probs=22.0
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 50 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~ 50 (274)
..-+++|+||+||||++.. +...+++..+.++
T Consensus 10 ~~~~k~viFDlDGTL~Ds~---------~~~~~a~~~~~~~ 41 (272)
T PRK13223 10 GRLPRLVMFDLDGTLVDSV---------PDLAAAVDRMLLE 41 (272)
T ss_pred CccCCEEEEcCCCccccCH---------HHHHHHHHHHHHH
Confidence 4456799999999999932 2355666665544
No 211
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=91.68 E-value=0.3 Score=42.34 Aligned_cols=22 Identities=27% Similarity=0.440 Sum_probs=17.5
Q ss_pred hhhhc-cCCcEEEEEecCccccC
Q 023990 5 ITEAS-KGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 5 ~~~~~-~~~~~li~~DlDGTL~~ 26 (274)
++++. ..+.++|+||+||||++
T Consensus 31 ~~~~~~~~~~k~VIFDlDGTLvD 53 (286)
T PLN02779 31 VASASASALPEALLFDCDGVLVE 53 (286)
T ss_pred hhhhccccCCcEEEEeCceeEEc
Confidence 34444 56678999999999999
No 212
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=91.47 E-value=0.12 Score=42.67 Aligned_cols=41 Identities=7% Similarity=0.058 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEE
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGIL 232 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~ 232 (274)
-+......+++.++++++ +++.+||+.+|+..=+.+ |+.++
T Consensus 143 P~p~~~~~a~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~i 183 (221)
T PRK10563 143 PDPALMFHAAEAMNVNVE---NCILVDDSSAGAQSGIAA-----GMEVF 183 (221)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC-----CCEEE
Confidence 457888999999999876 799999999998877766 76554
No 213
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=91.37 E-value=0.083 Score=44.10 Aligned_cols=30 Identities=23% Similarity=0.238 Sum_probs=20.1
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 50 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~ 50 (274)
..+.|+||+||||++.. +...++++.+.++
T Consensus 11 ~~k~viFD~DGTL~Ds~---------~~~~~a~~~~~~~ 40 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSA---------PDMLATVNAMLAA 40 (229)
T ss_pred cCCEEEEcCcCccccCH---------HHHHHHHHHHHHH
Confidence 34789999999999921 2345555555444
No 214
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=91.10 E-value=0.5 Score=38.80 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=13.1
Q ss_pred cEEEEEecCccccCC
Q 023990 13 QIVMFLDYDGTLSPI 27 (274)
Q Consensus 13 ~~li~~DlDGTL~~~ 27 (274)
.++++||+||||++.
T Consensus 1 ~k~viFD~DGTL~d~ 15 (224)
T TIGR02254 1 YKTLLFDLDDTILDF 15 (224)
T ss_pred CCEEEEcCcCccccc
Confidence 478999999999993
No 215
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=90.93 E-value=0.19 Score=40.09 Aligned_cols=36 Identities=19% Similarity=0.103 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
-+-...+.+++.++++++ ++++|||+.+|+.+-+.+
T Consensus 142 p~p~~~~~~~~~~~~~~~---~~v~vgD~~~di~aA~~a 177 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPS---ECIGIEDAQAGIEAIKAA 177 (185)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEecCHHHHHHHHHc
Confidence 457788899999998875 799999999998887776
No 216
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=90.92 E-value=0.13 Score=46.33 Aligned_cols=73 Identities=11% Similarity=0.144 Sum_probs=41.7
Q ss_pred cCCcEEEEEecCccccCCccCC------CcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcCccCceEeccCcce
Q 023990 10 KGKQIVMFLDYDGTLSPIVENP------DRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVKLAELYYAGSHGMD 82 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~------~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~~~~~~li~~nG~~ 82 (274)
+..++++++|+|||++..+--. .+.--+....+.-.+..+++ .|...|.|++..+...-. .+..|+.||..
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrs--ylrnieQngyk 449 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRS--YLRNIEQNGYK 449 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhh--HHHhhhhcCcc
Confidence 7788999999999999732100 00001222333334444554 688999999876543221 12356666664
Q ss_pred Ee
Q 023990 83 IK 84 (274)
Q Consensus 83 i~ 84 (274)
+.
T Consensus 450 Lp 451 (580)
T COG5083 450 LP 451 (580)
T ss_pred CC
Confidence 43
No 217
>PRK09449 dUMP phosphatase; Provisional
Probab=90.52 E-value=0.14 Score=42.43 Aligned_cols=65 Identities=17% Similarity=0.193 Sum_probs=45.6
Q ss_pred HHHHHHHHHHcCcCCCCCeeEEEEcCCc-CCHHHHHHHHhCCCce-EEEecC-CC---CCccceEEeCCHHHHHHHHH
Q 023990 186 GKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSK-FP---KKTSASYSLREPDEVMDFLQ 257 (274)
Q Consensus 186 g~al~~l~~~~~~~~~~~~~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~n-a~---~~~~A~~~~~~~~~v~~~L~ 257 (274)
-.....+++.+|..+. ++++.+||+. +|+..=+.+ |. +|.+.. .. ....+++++++..++..+|.
T Consensus 153 p~~~~~~~~~~~~~~~--~~~~~vgD~~~~Di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 153 VAIFDYALEQMGNPDR--SRVLMVGDNLHSDILGGINA-----GIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred HHHHHHHHHHcCCCCc--ccEEEEcCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 4678888999987432 2799999998 798877766 65 455542 21 12357888899988887664
No 218
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=90.52 E-value=0.097 Score=42.75 Aligned_cols=11 Identities=36% Similarity=0.667 Sum_probs=10.2
Q ss_pred EEEecCccccC
Q 023990 16 MFLDYDGTLSP 26 (274)
Q Consensus 16 i~~DlDGTL~~ 26 (274)
|+||+||||++
T Consensus 1 iiFDlDGTL~D 11 (205)
T TIGR01454 1 VVFDLDGVLVD 11 (205)
T ss_pred CeecCcCcccc
Confidence 58999999999
No 219
>PRK09449 dUMP phosphatase; Provisional
Probab=90.41 E-value=1 Score=37.06 Aligned_cols=15 Identities=33% Similarity=0.237 Sum_probs=13.3
Q ss_pred CcEEEEEecCccccC
Q 023990 12 KQIVMFLDYDGTLSP 26 (274)
Q Consensus 12 ~~~li~~DlDGTL~~ 26 (274)
+.+.|+||+||||++
T Consensus 2 ~~k~iiFDlDGTLid 16 (224)
T PRK09449 2 KYDWILFDADETLFH 16 (224)
T ss_pred CccEEEEcCCCchhc
Confidence 367899999999997
No 220
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.31 E-value=0.75 Score=42.29 Aligned_cols=63 Identities=16% Similarity=0.134 Sum_probs=46.7
Q ss_pred cCCcEEEEEecCccccCCc-----------cCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcCc-cC
Q 023990 10 KGKQIVMFLDYDGTLSPIV-----------ENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVKL-AE 72 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~-----------~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~~-~~ 72 (274)
...+|.+++|||+||...- ++...+..-....+.|..|.+++ .+++||=.....+.+.+.. |+
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp~ 294 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHPD 294 (574)
T ss_pred CcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCCC
Confidence 6778999999999998621 00011233457788899999996 8999999999999987743 44
No 221
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=90.27 E-value=0.86 Score=42.31 Aligned_cols=65 Identities=18% Similarity=0.135 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCC--C--CccceEEeCCHHHHHHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFP--K--KTSASYSLREPDEVMDFLQKL 259 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~--~--~~~A~~~~~~~~~v~~~L~~l 259 (274)
|-..+..+++.++. + ++++|||+.+|+.+-+.+ |. +|.+.... . ...+++++++..++..++..+
T Consensus 387 kP~~~~~al~~l~~--~---~~v~VGDs~~Di~aAk~A-----G~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 387 KSDLVKSILNKYDI--K---EAAVVGDRLSDINAAKDN-----GLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred CcHHHHHHHHhcCc--c---eEEEEeCCHHHHHHHHHC-----CCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 45677777777653 3 799999999999988887 65 55554321 1 135788999999988877654
No 222
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=90.26 E-value=0.21 Score=39.53 Aligned_cols=31 Identities=10% Similarity=0.091 Sum_probs=25.2
Q ss_pred HHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHH
Q 023990 186 GKALEFLLECLGFADCSNVFPVYIGDDTTDEDAF 219 (274)
Q Consensus 186 g~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~ 219 (274)
-...+.+++.+|++++ +++.+||+..|+..=
T Consensus 142 p~~f~~~~~~~~~~p~---~~l~vgD~~~Di~~A 172 (175)
T TIGR01493 142 PVVYELVFDTVGLPPD---RVLMVAAHQWDLIGA 172 (175)
T ss_pred HHHHHHHHHHHCCCHH---HeEeEecChhhHHHH
Confidence 4556788888999876 899999999997753
No 223
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=90.24 E-value=0.53 Score=37.50 Aligned_cols=48 Identities=27% Similarity=0.268 Sum_probs=36.6
Q ss_pred EEEEEecCccccCCcc---CCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCH
Q 023990 14 IVMFLDYDGTLSPIVE---NPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCR 61 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~---~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~ 61 (274)
+++|+|.||||..... .+++..+.|.+.++|++|++++ .++++|..+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 6899999999994211 1223445788999999999985 8999998764
No 224
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=90.19 E-value=0.5 Score=35.52 Aligned_cols=36 Identities=31% Similarity=0.232 Sum_probs=31.2
Q ss_pred CHHHHHHHHHHHc-CcCCCCCeeEEEEcC-CcCCHHHHHHH
Q 023990 184 DKGKALEFLLECL-GFADCSNVFPVYIGD-DTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~-~~~~~~~~~vi~~GD-s~ND~~M~~~~ 222 (274)
.|...++++++.+ +++++ +++.+|| +.+|+.+-+.+
T Consensus 86 P~~~~~~~~~~~~~~~~~~---~~v~IGD~~~~Di~~A~~~ 123 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPE---ESVYVGDQDLTDLQAAKRA 123 (132)
T ss_pred CChHHHHHHHHHcCCCChh---heEEEcCCCcccHHHHHHC
Confidence 4678999999999 58876 8999999 79999988877
No 225
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=89.84 E-value=0.12 Score=39.88 Aligned_cols=35 Identities=20% Similarity=0.251 Sum_probs=28.7
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.+...+.++++.+++++ +++.+||+..|+.+=+.+
T Consensus 119 p~~~~~~~~~~~~~~~~----~~l~iGDs~~Di~aa~~a 153 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP----EVLHVGDNLNDIEGARNA 153 (154)
T ss_pred cCHHHHHHHHHHcCCCC----CEEEEeCCHHHHHHHHHc
Confidence 45788999999999875 499999999998776543
No 226
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=89.83 E-value=0.59 Score=37.18 Aligned_cols=64 Identities=20% Similarity=0.214 Sum_probs=39.1
Q ss_pred hhhhhc-cCCcEEEEEecCccccCCccC---------C-------------------CcCCCChHHHHHHHHHh-hcC-C
Q 023990 4 EITEAS-KGKQIVMFLDYDGTLSPIVEN---------P-------------------DRAFMSGKMRRAVRQLA-KYF-P 52 (274)
Q Consensus 4 ~~~~~~-~~~~~li~~DlDGTL~~~~~~---------~-------------------~~~~i~~~~~~al~~L~-~~~-~ 52 (274)
+|.... ..+.-.+-||+|.|++..+.. | +...|+.+.-..|-.+. +.+ .
T Consensus 53 qI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~ 132 (237)
T COG3700 53 QIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDA 132 (237)
T ss_pred HHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCe
Confidence 344444 445567888999998852100 0 13345555544444454 446 7
Q ss_pred EEEEcCCCHhhHHhh
Q 023990 53 TAIVTGRCRDKVYDF 67 (274)
Q Consensus 53 v~i~TGR~~~~l~~~ 67 (274)
++++|||+.......
T Consensus 133 i~FvTGRt~gk~d~v 147 (237)
T COG3700 133 IYFVTGRTPGKTDTV 147 (237)
T ss_pred EEEEecCCCCccccc
Confidence 999999998765543
No 227
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=89.38 E-value=0.2 Score=40.62 Aligned_cols=42 Identities=21% Similarity=0.319 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEec
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVS 234 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~ 234 (274)
+....+.+++.+|++++ +++.+||+.+|+..-+.+ |. +|.+.
T Consensus 150 ~~~~~~~~~~~~~~~p~---~~~~vgD~~~Di~~A~~~-----G~~~i~v~ 192 (198)
T TIGR01428 150 APQVYQLALEALGVPPD---EVLFVASNPWDLGGAKKF-----GFKTAWVN 192 (198)
T ss_pred CHHHHHHHHHHhCCChh---hEEEEeCCHHHHHHHHHC-----CCcEEEec
Confidence 35678899999999886 799999999998887776 65 44454
No 228
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=88.99 E-value=0.67 Score=38.91 Aligned_cols=14 Identities=21% Similarity=0.415 Sum_probs=12.3
Q ss_pred EEEEecCccccCCc
Q 023990 15 VMFLDYDGTLSPIV 28 (274)
Q Consensus 15 li~~DlDGTL~~~~ 28 (274)
|++||||+||++.+
T Consensus 2 LvvfDFD~TIvd~d 15 (234)
T PF06888_consen 2 LVVFDFDHTIVDQD 15 (234)
T ss_pred EEEEeCCCCccCCc
Confidence 79999999999843
No 229
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=88.66 E-value=0.47 Score=36.59 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
-|...++.+++.++++++ +++.+||+..|++.-+.+
T Consensus 102 P~~~~~~~~~~~~~~~~~---e~i~IGDs~~Di~~A~~~ 137 (147)
T TIGR01656 102 PKPGLILEALKRLGVDAS---RSLVVGDRLRDLQAARNA 137 (147)
T ss_pred CCHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHC
Confidence 466788999999999876 799999999998877666
No 230
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=88.39 E-value=0.37 Score=38.32 Aligned_cols=27 Identities=22% Similarity=0.287 Sum_probs=18.9
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 50 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~ 50 (274)
+++||+||||++. .+...++++++.+.
T Consensus 1 ~iiFD~DGTL~ds---------~~~~~~~~~~~~~~ 27 (185)
T TIGR01990 1 AVIFDLDGVITDT---------AEYHYLAWKALADE 27 (185)
T ss_pred CeEEcCCCccccC---------hHHHHHHHHHHHHH
Confidence 4799999999983 13455666666555
No 231
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=88.26 E-value=0.23 Score=46.08 Aligned_cols=30 Identities=20% Similarity=0.311 Sum_probs=19.5
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHH
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQL 47 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L 47 (274)
.+.++||+||||++. ...+.....++++++
T Consensus 241 ~k~vIFDlDGTLiDs-----~~~~~~a~~~~~~~~ 270 (459)
T PRK06698 241 LQALIFDMDGTLFQT-----DKILELSLDDTFDHL 270 (459)
T ss_pred hhheeEccCCceecc-----hhHHHHHHHHHHHHH
Confidence 478999999999993 223344444555444
No 232
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=88.07 E-value=1.5 Score=37.30 Aligned_cols=41 Identities=17% Similarity=0.285 Sum_probs=33.1
Q ss_pred eCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 178 RPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 178 ~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.-. |.+||.++..+++..|..++ .++++-|+.-.+.=++.+
T Consensus 157 ft~-~~~KG~~L~~fL~~~~~~pk---~IIfIDD~~~nl~sv~~a 197 (252)
T PF11019_consen 157 FTG-GQDKGEVLKYFLDKINQSPK---KIIFIDDNKENLKSVEKA 197 (252)
T ss_pred EeC-CCccHHHHHHHHHHcCCCCC---eEEEEeCCHHHHHHHHHH
Confidence 346 78999999999999998876 799999987666544443
No 233
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=88.06 E-value=0.79 Score=39.90 Aligned_cols=42 Identities=21% Similarity=0.157 Sum_probs=32.3
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc-C----CEEEEc
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-F----PTAIVT 57 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~-~----~v~i~T 57 (274)
+.+.--|+||+||.|+. ...+-++..+|+++|.++ + .+++.|
T Consensus 32 s~~~fgfafDIDGVL~R------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 32 SPPTFGFAFDIDGVLFR------GHRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CCCceeEEEecccEEEe------cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 45566799999999998 235678899999999887 3 455555
No 234
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=87.95 E-value=0.41 Score=37.71 Aligned_cols=48 Identities=25% Similarity=0.233 Sum_probs=34.3
Q ss_pred cEEEEEecCccccCCcc------CCCcCCCChHHHHHHHHHhhcC-CEEEEcCCC
Q 023990 13 QIVMFLDYDGTLSPIVE------NPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRC 60 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~------~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~ 60 (274)
++++++|.||||....+ .++...+-+.+.++|++|++++ .++|+|-.+
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~ 55 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQD 55 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCc
Confidence 36899999999987211 1112234577899999999885 788888653
No 235
>PLN02645 phosphoglycolate phosphatase
Probab=87.80 E-value=2.1 Score=37.59 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCc-CCHHHHHHHHhCCCce-EEEecCC--CCC--------ccceEEeCCHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKF--PKK--------TSASYSLREPDEV 252 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~na--~~~--------~~A~~~~~~~~~v 252 (274)
+-..++.+++.++.+++ +++.+||+. +|+.+=+.+ |+ ++.|..+ ..+ ..+++++++..++
T Consensus 232 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 232 STFMMDYLANKFGIEKS---QICMVGDRLDTDILFGQNG-----GCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred hHHHHHHHHHHcCCCcc---cEEEEcCCcHHHHHHHHHc-----CCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 34567778888898876 899999997 999887776 54 5666332 111 2367888888887
Q ss_pred HHHHH
Q 023990 253 MDFLQ 257 (274)
Q Consensus 253 ~~~L~ 257 (274)
..+++
T Consensus 304 ~~~~~ 308 (311)
T PLN02645 304 LTLKA 308 (311)
T ss_pred HHHhh
Confidence 66554
No 236
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=87.67 E-value=2.1 Score=36.46 Aligned_cols=64 Identities=20% Similarity=0.207 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCc-CCHHHHHHHHhCCCce-EEEecCCC-----C---CccceEEeCCHHHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKFP-----K---KTSASYSLREPDEVMD 254 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~na~-----~---~~~A~~~~~~~~~v~~ 254 (274)
+....+.+++.++.+++ +++.+||+. +|+.+=+.+ |+ ++.|..+. . ...+++++++..++..
T Consensus 181 ~p~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~~-----G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~ 252 (257)
T TIGR01458 181 SKTFFLEALRATGCEPE---EAVMIGDDCRDDVGGAQDC-----GMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVD 252 (257)
T ss_pred CHHHHHHHHHHhCCChh---hEEEECCCcHHHHHHHHHc-----CCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHH
Confidence 45577788888898876 899999996 898887776 54 66664321 1 1246788888888776
Q ss_pred HH
Q 023990 255 FL 256 (274)
Q Consensus 255 ~L 256 (274)
+|
T Consensus 253 ~l 254 (257)
T TIGR01458 253 LI 254 (257)
T ss_pred HH
Confidence 54
No 237
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=87.38 E-value=0.83 Score=34.50 Aligned_cols=48 Identities=8% Similarity=0.099 Sum_probs=40.6
Q ss_pred EEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhcC
Q 023990 16 MFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 16 i~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~~ 69 (274)
.+-++++|+.. .+.+-+++.+.|+.|.+...++||||-....+.++..
T Consensus 17 ~~~~v~~tiat------gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIAT------GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEcc------CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHH
Confidence 45688999987 3467889999999999999999999999998887764
No 238
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=86.95 E-value=0.36 Score=39.49 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 186 GKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 186 g~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
....+.+++.+|++++ ++++|||+..|+.+=+.+
T Consensus 155 p~~~~~~~~~~g~~~~---~~l~i~D~~~di~aA~~a 188 (211)
T TIGR02247 155 PRIYQLMLERLGVAPE---ECVFLDDLGSNLKPAAAL 188 (211)
T ss_pred HHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHc
Confidence 4578888999999876 799999999998877776
No 239
>PLN02940 riboflavin kinase
Probab=86.69 E-value=1.2 Score=40.29 Aligned_cols=61 Identities=20% Similarity=0.080 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCC----CccceEEeCCHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK----KTSASYSLREPDEV 252 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~----~~~A~~~~~~~~~v 252 (274)
-+......+++.+|++++ ++++|||+.+|+..=+.+ |+ +|.+..... ...|++++++..++
T Consensus 151 P~p~~~~~a~~~lgv~p~---~~l~VGDs~~Di~aA~~a-----Gi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 151 PSPDIFLEAAKRLNVEPS---NCLVIEDSLPGVMAGKAA-----GMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CCHHHHHHHHHHcCCChh---HEEEEeCCHHHHHHHHHc-----CCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 456788999999999886 899999999998887777 65 455654321 13466777777664
No 240
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=86.67 E-value=0.75 Score=43.08 Aligned_cols=40 Identities=30% Similarity=0.312 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecC
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSK 235 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~n 235 (274)
.|..+++ +.+|.+.. .++.|||.||.+||+.+ +.+++|..
T Consensus 176 ~Kv~rl~---~~~g~~~~----~~aYgDS~sD~plL~~a-----~e~y~V~~ 215 (497)
T PLN02177 176 HKRDAVL---KEFGDALP----DLGLGDRETDHDFMSIC-----KEGYMVPR 215 (497)
T ss_pred HHHHHHH---HHhCCCCc----eEEEECCccHHHHHHhC-----CccEEeCC
Confidence 4777666 45564432 38999999999999999 66777765
No 241
>COG4996 Predicted phosphatase [General function prediction only]
Probab=86.35 E-value=0.94 Score=34.18 Aligned_cols=50 Identities=14% Similarity=0.103 Sum_probs=30.0
Q ss_pred EEEEEecCccccCCccC-----C--------------CcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhh
Q 023990 14 IVMFLDYDGTLSPIVEN-----P--------------DRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK 63 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~~-----~--------------~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~ 63 (274)
++|++|.||||.++-+- | ....+-+.+++.++++++.+ .+..+|=.-...
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~k 70 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDK 70 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHH
Confidence 47999999999974210 0 01123456677777777765 455666554443
No 242
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=85.94 E-value=0.67 Score=35.96 Aligned_cols=36 Identities=28% Similarity=0.297 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.+..+.+.+++.++++++ +++++||+..|+.+-+.+
T Consensus 134 p~~~~~~~~~~~~~~~p~---~~~~vgD~~~d~~~A~~~ 169 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPE---EILFVGDSPSDVEAAKEA 169 (176)
T ss_dssp TSHHHHHHHHHHHTSSGG---GEEEEESSHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCCcc---eEEEEeCCHHHHHHHHHc
Confidence 456889999999999886 899999999998888776
No 243
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=85.61 E-value=0.5 Score=38.97 Aligned_cols=63 Identities=24% Similarity=0.446 Sum_probs=41.8
Q ss_pred HHHHHHHHHcCcCCCCCeeEEEEcCCc-CCHHHHHHHHhCCCce-EEEecCCCCC-----ccceEEeCCHHHHHHHHH
Q 023990 187 KALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKFPKK-----TSASYSLREPDEVMDFLQ 257 (274)
Q Consensus 187 ~al~~l~~~~~~~~~~~~~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~na~~~-----~~A~~~~~~~~~v~~~L~ 257 (274)
..-+.+++.+|++++ +++.+||+. ||+..-+.+ |+ +|.+...... ....+.+.+..++...+.
T Consensus 158 ~~f~~~~~~~g~~p~---~~l~VgD~~~~di~gA~~~-----G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 158 EIFEYALEKLGVPPE---EALFVGDSLENDILGARAL-----GMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred HHHHHHHHHcCCCcc---eEEEECCChhhhhHHHHhc-----CcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence 566788899999876 899999965 564656665 65 5555543211 245556677777666654
No 244
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=85.61 E-value=1.4 Score=41.86 Aligned_cols=79 Identities=14% Similarity=0.166 Sum_probs=48.0
Q ss_pred cCCcEEEEEecCccccCCccC----C--CcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHH---hhcC-ccCceEecc
Q 023990 10 KGKQIVMFLDYDGTLSPIVEN----P--DRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY---DFVK-LAELYYAGS 78 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~----~--~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~---~~~~-~~~~~li~~ 78 (274)
+-.-++|++|+|||++..+-- | .+.=-....-+...+..+++ +++.+|.|+..... .++. +...+...-
T Consensus 527 kWn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LP 606 (738)
T KOG2116|consen 527 KWNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLP 606 (738)
T ss_pred ecCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCC
Confidence 455689999999999973210 0 00011334556666777776 89999999986543 3442 222234555
Q ss_pred CcceEeCCCC
Q 023990 79 HGMDIKGPTK 88 (274)
Q Consensus 79 nG~~i~~~~~ 88 (274)
.|=+|..|++
T Consensus 607 dGPViLSPd~ 616 (738)
T KOG2116|consen 607 DGPVILSPDS 616 (738)
T ss_pred CCCEEeCCCc
Confidence 6666666654
No 245
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=85.44 E-value=2.5 Score=35.01 Aligned_cols=80 Identities=20% Similarity=0.261 Sum_probs=49.1
Q ss_pred EEeCCCCCCHHHHHHHHHHHc---CcCCCCCeeEEEEcCCcCCH-HHHHHHHhCCCceEEEecCC--------CC-Cccc
Q 023990 176 EIRPKIEWDKGKALEFLLECL---GFADCSNVFPVYIGDDTTDE-DAFKILRKREQGFGILVSKF--------PK-KTSA 242 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~---~~~~~~~~~vi~~GDs~ND~-~M~~~~~~~~~g~~v~v~na--------~~-~~~A 242 (274)
...|+ +.=||..+.++.... |+..+ .++.+||+-||+ |+++.- . ..|.+.-.|- .+ .-.|
T Consensus 156 ~~CPs-NmCKg~Vl~~~~~s~~~~gv~ye---r~iYvGDG~nD~CP~l~Lr-~--~D~ampRkgfpl~k~~~~~p~~~ka 228 (256)
T KOG3120|consen 156 NLCPS-NMCKGLVLDELVASQLKDGVRYE---RLIYVGDGANDFCPVLRLR-A--CDVAMPRKGFPLWKLISANPMLLKA 228 (256)
T ss_pred CcCch-hhhhhHHHHHHHHHHhhcCCcee---eEEEEcCCCCCcCcchhcc-c--CceecccCCCchHhhhhcCcceeee
Confidence 34789 999999999997554 55543 899999999997 444432 1 1232222221 11 1234
Q ss_pred eEEe-CCHHHHHHHHHHHHhh
Q 023990 243 SYSL-REPDEVMDFLQKLVRW 262 (274)
Q Consensus 243 ~~~~-~~~~~v~~~L~~l~~~ 262 (274)
..+. .+..++.+.|..++..
T Consensus 229 sV~~W~sg~d~~~~L~~lik~ 249 (256)
T KOG3120|consen 229 SVLEWSSGEDLERILQQLIKT 249 (256)
T ss_pred eEEecccHHHHHHHHHHHHHH
Confidence 4332 5667778888777653
No 246
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=84.90 E-value=0.49 Score=37.80 Aligned_cols=11 Identities=45% Similarity=0.999 Sum_probs=10.2
Q ss_pred EEEecCccccC
Q 023990 16 MFLDYDGTLSP 26 (274)
Q Consensus 16 i~~DlDGTL~~ 26 (274)
++||+||||+.
T Consensus 1 v~fD~DGTL~~ 11 (192)
T PF12710_consen 1 VIFDFDGTLTD 11 (192)
T ss_dssp EEEESBTTTBS
T ss_pred eEEecCcCeec
Confidence 68999999998
No 247
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=84.75 E-value=1.6 Score=35.22 Aligned_cols=14 Identities=29% Similarity=0.392 Sum_probs=12.6
Q ss_pred EEEEEecCccccCC
Q 023990 14 IVMFLDYDGTLSPI 27 (274)
Q Consensus 14 ~li~~DlDGTL~~~ 27 (274)
++|+||+||||++.
T Consensus 2 k~viFD~dgTLiD~ 15 (198)
T TIGR01428 2 KALVFDVYGTLFDV 15 (198)
T ss_pred cEEEEeCCCcCccH
Confidence 68999999999993
No 248
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=83.91 E-value=0.49 Score=38.45 Aligned_cols=48 Identities=15% Similarity=0.143 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcC--CcCCHHHHHHHHhCC--CceEEEecCC
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGD--DTTDEDAFKILRKRE--QGFGILVSKF 236 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GD--s~ND~~M~~~~~~~~--~g~~v~v~na 236 (274)
.-..+..+++.+|+.. .+++.+. ++++-.+++.+...+ .+..+.+|.+
T Consensus 153 ~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg 204 (215)
T PF00702_consen 153 NESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDG 204 (215)
T ss_dssp EHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESS
T ss_pred cccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEEEccC
Confidence 3445667777899853 4566666 787764444444432 1345566654
No 249
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=83.75 E-value=2.4 Score=34.87 Aligned_cols=15 Identities=40% Similarity=0.620 Sum_probs=13.7
Q ss_pred CcEEEEEecCccccC
Q 023990 12 KQIVMFLDYDGTLSP 26 (274)
Q Consensus 12 ~~~li~~DlDGTL~~ 26 (274)
+.++++||+||||++
T Consensus 3 ~~~~viFD~DGTL~d 17 (221)
T PRK10563 3 QIEAVFFDCDGTLVD 17 (221)
T ss_pred CCCEEEECCCCCCCC
Confidence 468999999999998
No 250
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=82.78 E-value=1.2 Score=35.44 Aligned_cols=14 Identities=21% Similarity=0.425 Sum_probs=12.7
Q ss_pred cEEEEEecCccccC
Q 023990 13 QIVMFLDYDGTLSP 26 (274)
Q Consensus 13 ~~li~~DlDGTL~~ 26 (274)
.++|+||+||||++
T Consensus 1 ~~~iiFD~DGTL~d 14 (185)
T TIGR02009 1 YKAVIFDMDGVIVD 14 (185)
T ss_pred CCeEEEcCCCcccC
Confidence 36899999999999
No 251
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=82.77 E-value=0.55 Score=37.12 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 186 GKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 186 g~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
....+.+++.++++++ ++++|||+..|+.+-+.+
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~vgD~~~di~aA~~~ 176 (183)
T TIGR01509 143 PDIYLLALKKLGLKPE---ECLFVDDSPAGIEAAKAA 176 (183)
T ss_pred HHHHHHHHHHcCCCcc---eEEEEcCCHHHHHHHHHc
Confidence 6678888999999876 899999999998877776
No 252
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=82.63 E-value=1.1 Score=44.02 Aligned_cols=37 Identities=24% Similarity=0.298 Sum_probs=29.9
Q ss_pred eEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC---CccceEEe
Q 023990 205 FPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK---KTSASYSL 246 (274)
Q Consensus 205 ~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~---~~~A~~~~ 246 (274)
-|.+.||+.||-|.|+.+ ..|||||=+.. +.+|+.++
T Consensus 707 iVaVTGDGVNDsPALKKA-----DIGVAMGiaGSDvsKqAADmIL 746 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMIL 746 (1019)
T ss_pred EEEEeCCCcCCChhhccc-----ccceeeccccchHHHhhcceEE
Confidence 477899999999999998 79999987642 46777664
No 253
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=82.43 E-value=2.3 Score=36.76 Aligned_cols=51 Identities=16% Similarity=0.034 Sum_probs=38.4
Q ss_pred CCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhh
Q 023990 11 GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF 67 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~ 67 (274)
...-.|+||.||.|... ...-|.+.+++..|++.+ .++++|=.+....+.+
T Consensus 20 ~~~DtfifDcDGVlW~g------~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y 71 (306)
T KOG2882|consen 20 DSFDTFIFDCDGVLWLG------EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQY 71 (306)
T ss_pred hhcCEEEEcCCcceeec------CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHH
Confidence 34567999999999882 245678889999999997 6888877666555444
No 254
>PRK08238 hypothetical protein; Validated
Probab=82.38 E-value=1.6 Score=40.76 Aligned_cols=43 Identities=26% Similarity=0.232 Sum_probs=31.1
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP 237 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~ 237 (274)
+-.|...++ +.++.. .+..+||+.+|++|++.+ +.+++|++..
T Consensus 126 g~~K~~~l~---~~l~~~-----~~~yvGDS~~Dlp~~~~A-----~~av~Vn~~~ 168 (479)
T PRK08238 126 GAAKAAALV---EAFGER-----GFDYAGNSAADLPVWAAA-----RRAIVVGASP 168 (479)
T ss_pred CchHHHHHH---HHhCcc-----CeeEecCCHHHHHHHHhC-----CCeEEECCCH
Confidence 345766544 555532 367789999999999999 7888887643
No 255
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=81.91 E-value=1.5 Score=36.23 Aligned_cols=68 Identities=19% Similarity=0.265 Sum_probs=44.6
Q ss_pred HHHHHHHHHcCcC-CCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCCCccceEEeCCHHHHHHHHHHHHhh
Q 023990 187 KALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPKKTSASYSLREPDEVMDFLQKLVRW 262 (274)
Q Consensus 187 ~al~~l~~~~~~~-~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~~~~A~~~~~~~~~v~~~L~~l~~~ 262 (274)
.|.+......|+. +. .+++|-||.+-+.-=+.+ |+ ++.++......-+++++.+.......+-.|.+.
T Consensus 164 ~afE~a~k~agi~~p~---~t~FfDDS~~NI~~ak~v-----Gl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~ 233 (244)
T KOG3109|consen 164 EAFEKAMKVAGIDSPR---NTYFFDDSERNIQTAKEV-----GLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEI 233 (244)
T ss_pred HHHHHHHHHhCCCCcC---ceEEEcCchhhHHHHHhc-----cceeEEEEeeecccchHHHHHHhhchhhhchHHhhc
Confidence 5677888888987 44 899999999987766665 54 677776443344555554444444445555444
No 256
>PLN02811 hydrolase
Probab=81.90 E-value=2.3 Score=35.02 Aligned_cols=43 Identities=12% Similarity=0.047 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcC---cCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecC
Q 023990 185 KGKALEFLLECLG---FADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSK 235 (274)
Q Consensus 185 Kg~al~~l~~~~~---~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~n 235 (274)
+-.....+++.++ ++++ ++++|||+..|+.+=+.+ |+ +|.+..
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~---~~v~IgDs~~di~aA~~a-----G~~~i~v~~ 185 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPG---KVLVFEDAPSGVEAAKNA-----GMSVVMVPD 185 (220)
T ss_pred CcHHHHHHHHHhCCCCCCcc---ceEEEeccHhhHHHHHHC-----CCeEEEEeC
Confidence 4457778888886 7765 799999999998887777 64 555544
No 257
>PRK10444 UMP phosphatase; Provisional
Probab=81.74 E-value=5 Score=33.96 Aligned_cols=61 Identities=20% Similarity=0.055 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCc-CCHHHHHHHHhCCCce-EEEecCCC--C------CccceEEeCCHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKFP--K------KTSASYSLREPDEV 252 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~na~--~------~~~A~~~~~~~~~v 252 (274)
-+...+..+++.++++++ +++++||+. +|+.+=+.+ |+ ++.|..+. . +...++++++..++
T Consensus 175 P~~~~~~~~~~~~~~~~~---~~v~IGD~~~tDi~~A~~~-----G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSE---ETVIVGDNLRTDILAGFQA-----GLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEECCCcHHHHHHHHHc-----CCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 456677888888898876 899999996 899888776 54 66664332 1 12456777776653
No 258
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=81.22 E-value=0.8 Score=37.14 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
-+....+.+++.+|++++ +++++||+..|+..=+.+
T Consensus 142 P~p~~~~~~~~~~~~~p~---~~l~vgD~~~di~aA~~a 177 (199)
T PRK09456 142 PEARIYQHVLQAEGFSAA---DAVFFDDNADNIEAANAL 177 (199)
T ss_pred CCHHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHc
Confidence 356778889999999886 899999999996665555
No 259
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=81.21 E-value=4.3 Score=33.97 Aligned_cols=18 Identities=28% Similarity=0.313 Sum_probs=15.1
Q ss_pred cCCcEEEEEecCccccCC
Q 023990 10 KGKQIVMFLDYDGTLSPI 27 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~ 27 (274)
.++.+.|+||+||||++.
T Consensus 7 ~~~~k~iiFDlDGTL~D~ 24 (238)
T PRK10748 7 LGRISALTFDLDDTLYDN 24 (238)
T ss_pred CCCceeEEEcCcccccCC
Confidence 345789999999999993
No 260
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=80.19 E-value=2.7 Score=31.59 Aligned_cols=34 Identities=12% Similarity=0.139 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHcC--cCCCCCeeEEEEcCCcCCHHHHH
Q 023990 184 DKGKALEFLLECLG--FADCSNVFPVYIGDDTTDEDAFK 220 (274)
Q Consensus 184 sKg~al~~l~~~~~--~~~~~~~~vi~~GDs~ND~~M~~ 220 (274)
.|...+..+++.+| ++++ ++++|||+..|++-++
T Consensus 90 pkp~~~~~a~~~lg~~~~p~---~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPK---SILFVDDRPDNNEEVD 125 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcc---eEEEECCCHhHHHHHH
Confidence 57888999999999 8886 8999999999866544
No 261
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=80.08 E-value=0.84 Score=46.89 Aligned_cols=60 Identities=17% Similarity=0.124 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEecCCCC-----CccceEEeCCHHHH
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVSKFPK-----KTSASYSLREPDEV 252 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~na~~-----~~~A~~~~~~~~~v 252 (274)
+......+++.++++++ ++++|||+.+|+..=+.+ |+ .|.+..... ...|++++++..++
T Consensus 220 ~Pe~~~~a~~~lgv~p~---e~v~IgDs~~Di~AA~~a-----Gm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKILGVPTS---ECVVIEDALAGVQAARAA-----GMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHcCcCcc---cEEEEcCCHHHHHHHHHc-----CCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 46777888999999876 799999999998877776 65 555554321 13567788888774
No 262
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=79.89 E-value=3.8 Score=36.10 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.|...++.+++.+|+.++ .++++||+..|+.+-+..
T Consensus 87 pk~~~i~~~~~~l~i~~~---~~vfidD~~~d~~~~~~~ 122 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTD---SFLFIDDNPAERANVKIT 122 (320)
T ss_pred chHHHHHHHHHHhCCCcC---cEEEECCCHHHHHHHHHH
Confidence 799999999999999876 799999999999888775
No 263
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=78.87 E-value=4.1 Score=40.26 Aligned_cols=53 Identities=23% Similarity=0.229 Sum_probs=41.2
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCC---CCccceEEe
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFP---KKTSASYSL 246 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~---~~~~A~~~~ 246 (274)
..+|-.-++-|.++ | +-|.+-||+.||-|.|+.+ ..|++||-+. .+++++.++
T Consensus 724 P~DK~lLVk~L~~~-g------~VVAVTGDGTNDaPALkeA-----DVGlAMGIaGTeVAKEaSDIIi 779 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIKQ-G------EVVAVTGDGTNDAPALKEA-----DVGLAMGIAGTEVAKEASDIII 779 (1034)
T ss_pred CchHHHHHHHHHhc-C------cEEEEecCCCCCchhhhhc-----ccchhccccchhhhhhhCCeEE
Confidence 45899888888733 2 2578889999999999999 6888998764 346778765
No 264
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=78.60 E-value=3.5 Score=32.40 Aligned_cols=12 Identities=33% Similarity=0.672 Sum_probs=10.9
Q ss_pred EEEecCccccCC
Q 023990 16 MFLDYDGTLSPI 27 (274)
Q Consensus 16 i~~DlDGTL~~~ 27 (274)
++||+||||++.
T Consensus 2 vlFDlDgtLv~~ 13 (183)
T TIGR01509 2 ILFDLDGVLVDT 13 (183)
T ss_pred eeeccCCceech
Confidence 799999999993
No 265
>PHA02597 30.2 hypothetical protein; Provisional
Probab=78.00 E-value=3.9 Score=32.93 Aligned_cols=15 Identities=27% Similarity=0.390 Sum_probs=13.3
Q ss_pred cEEEEEecCccccCC
Q 023990 13 QIVMFLDYDGTLSPI 27 (274)
Q Consensus 13 ~~li~~DlDGTL~~~ 27 (274)
.++|+||+||||+++
T Consensus 2 ~k~viFDlDGTLiD~ 16 (197)
T PHA02597 2 KPTILTDVDGVLLSW 16 (197)
T ss_pred CcEEEEecCCceEch
Confidence 578999999999993
No 266
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=77.72 E-value=2.3 Score=32.68 Aligned_cols=27 Identities=30% Similarity=0.391 Sum_probs=18.1
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 50 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~ 50 (274)
+|+||+||||++. . +....+++++.++
T Consensus 1 ~iifD~DGTL~d~-----~----~~~~~~~~~~~~~ 27 (154)
T TIGR01549 1 AILFDIDGTLVDS-----S----FAIRRAFEETLEE 27 (154)
T ss_pred CeEecCCCccccc-----H----HHHHHHHHHHHHH
Confidence 4799999999992 1 3445555555544
No 267
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=77.52 E-value=9.3 Score=31.27 Aligned_cols=17 Identities=29% Similarity=0.362 Sum_probs=14.8
Q ss_pred CCcEEEEEecCccccCC
Q 023990 11 GKQIVMFLDYDGTLSPI 27 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~ 27 (274)
...+.|+||+||||++.
T Consensus 2 ~~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 2 MMIKAILFDLDGTLLDF 18 (229)
T ss_pred CceeEEEEecCCccccc
Confidence 45789999999999994
No 268
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=77.45 E-value=4.4 Score=34.03 Aligned_cols=22 Identities=32% Similarity=0.410 Sum_probs=16.9
Q ss_pred hhhccCCcEEEEEecCccccCC
Q 023990 6 TEASKGKQIVMFLDYDGTLSPI 27 (274)
Q Consensus 6 ~~~~~~~~~li~~DlDGTL~~~ 27 (274)
.++-..+++.|+.|||-|+++.
T Consensus 72 ~k~~k~K~~aVvlDlDETvLdN 93 (274)
T COG2503 72 AKKKKGKKKAVVLDLDETVLDN 93 (274)
T ss_pred hccccCCCceEEEecchHhhcC
Confidence 3344566679999999999983
No 269
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=77.35 E-value=1.9 Score=34.80 Aligned_cols=12 Identities=33% Similarity=0.722 Sum_probs=11.2
Q ss_pred EEEEecCccccC
Q 023990 15 VMFLDYDGTLSP 26 (274)
Q Consensus 15 li~~DlDGTL~~ 26 (274)
+|+||+||||++
T Consensus 2 ~viFD~DGTLiD 13 (197)
T TIGR01548 2 ALVLDMDGVMAD 13 (197)
T ss_pred ceEEecCceEEe
Confidence 689999999999
No 270
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=77.27 E-value=7.5 Score=30.72 Aligned_cols=44 Identities=25% Similarity=0.162 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCc-CCHHHHHHHHhCCCce-EEEecC
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSK 235 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~n 235 (274)
-+...+..+++.++++++ ++++|||+. .|+..=+.+ |+ +|.+..
T Consensus 92 P~p~~~~~~l~~~~~~~~---~~l~IGDs~~~Di~aA~~a-----Gi~~i~v~~ 137 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSE---QVAVVGDRLFTDVMGGNRN-----GSYTILVEP 137 (170)
T ss_pred CChHHHHHHHHHcCCCHH---HEEEECCcchHHHHHHHHc-----CCeEEEEcc
Confidence 456788999999998876 799999998 798877666 65 555643
No 271
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.77 E-value=1.7 Score=28.25 Aligned_cols=28 Identities=29% Similarity=0.463 Sum_probs=24.2
Q ss_pred HHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHH
Q 023990 187 KALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 221 (274)
Q Consensus 187 ~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~ 221 (274)
.-++.++..+|+ ++.|||-.-|++|++.
T Consensus 5 YDVqQlLK~~G~-------ivyfg~r~~~iemm~~ 32 (68)
T COG4483 5 YDVQQLLKKFGI-------IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHHCCe-------eeecCCHHHHHHHHHH
Confidence 357889999984 8999999999999875
No 272
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=76.36 E-value=1.7 Score=34.22 Aligned_cols=11 Identities=36% Similarity=0.682 Sum_probs=10.3
Q ss_pred EEEecCccccC
Q 023990 16 MFLDYDGTLSP 26 (274)
Q Consensus 16 i~~DlDGTL~~ 26 (274)
++.|+|||++.
T Consensus 9 ~ciDIDGtit~ 19 (194)
T COG5663 9 CCIDIDGTITD 19 (194)
T ss_pred eeeccCCceec
Confidence 88999999997
No 273
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=75.83 E-value=2.1 Score=40.21 Aligned_cols=17 Identities=29% Similarity=0.237 Sum_probs=13.9
Q ss_pred CCcEEEEEecCccccCC
Q 023990 11 GKQIVMFLDYDGTLSPI 27 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~ 27 (274)
...+.++||+||||+..
T Consensus 20 ~~~~~~~FDfDGTLt~~ 36 (497)
T PLN02177 20 RSNQTVAADLDGTLLIS 36 (497)
T ss_pred ccccEEEEecCCcccCC
Confidence 34568999999999983
No 274
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=75.15 E-value=6.5 Score=33.23 Aligned_cols=45 Identities=27% Similarity=0.202 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCc-CCHHHHHHHHhCCCce-EEEecCC
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDT-TDEDAFKILRKREQGF-GILVSKF 236 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~na 236 (274)
-+-...+.+++.++++++ +++.+||+. +|+.+=+.+ |+ ++.|..+
T Consensus 179 P~~~~~~~~~~~~~~~~~---~~~~VGD~~~~Di~~a~~~-----G~~~v~v~~G 225 (249)
T TIGR01457 179 PNAIIMEKAVEHLGTERE---ETLMVGDNYLTDIRAGIDA-----GIDTLLVHTG 225 (249)
T ss_pred ChHHHHHHHHHHcCCCcc---cEEEECCCchhhHHHHHHc-----CCcEEEEcCC
Confidence 456788889999998876 799999996 899988887 65 6666543
No 275
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=74.79 E-value=4.3 Score=33.32 Aligned_cols=51 Identities=18% Similarity=0.140 Sum_probs=35.1
Q ss_pred CCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc-CCEEEE---cCCCHhhHHhh
Q 023990 11 GKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-FPTAIV---TGRCRDKVYDF 67 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~-~~v~i~---TGR~~~~l~~~ 67 (274)
...+-+++|+-|||... . ...|.+.+||++|+.. ..|=++ |+.|...+.+.
T Consensus 5 ~~v~gvLlDlSGtLh~e-----~-~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIE-----D-AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred cccceEEEeccceEecc-----c-ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHH
Confidence 34577999999999883 2 3568899999999966 344444 34445555443
No 276
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=74.40 E-value=3.4 Score=33.36 Aligned_cols=14 Identities=29% Similarity=0.375 Sum_probs=12.4
Q ss_pred EEEEEecCccccCC
Q 023990 14 IVMFLDYDGTLSPI 27 (274)
Q Consensus 14 ~li~~DlDGTL~~~ 27 (274)
++|+||+||||++.
T Consensus 1 k~viFDlDGTL~d~ 14 (203)
T TIGR02252 1 KLITFDAVGTLLAL 14 (203)
T ss_pred CeEEEecCCceeee
Confidence 47999999999993
No 277
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=73.84 E-value=3.6 Score=32.72 Aligned_cols=15 Identities=27% Similarity=0.468 Sum_probs=13.6
Q ss_pred CcEEEEEecCccccC
Q 023990 12 KQIVMFLDYDGTLSP 26 (274)
Q Consensus 12 ~~~li~~DlDGTL~~ 26 (274)
+.++++||+||||++
T Consensus 4 ~~~~viFD~DGTLiD 18 (188)
T PRK10725 4 RYAGLIFDMDGTILD 18 (188)
T ss_pred cceEEEEcCCCcCcc
Confidence 468999999999998
No 278
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=73.45 E-value=5.9 Score=32.91 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.+......+++.+|++++ +++++||+..|+..=+.+
T Consensus 153 P~p~~y~~i~~~lgv~p~---e~lfVgDs~~Di~AA~~A 188 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPR---EILFLSDIINELDAARKA 188 (220)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEEeCCHHHHHHHHHc
Confidence 456678899999999886 899999999998876666
No 279
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=72.25 E-value=4.9 Score=31.95 Aligned_cols=13 Identities=54% Similarity=0.800 Sum_probs=11.6
Q ss_pred EEEEecCccccCC
Q 023990 15 VMFLDYDGTLSPI 27 (274)
Q Consensus 15 li~~DlDGTL~~~ 27 (274)
+++||+||||++.
T Consensus 2 ~viFDlDGTL~ds 14 (184)
T TIGR01993 2 VWFFDLDNTLYPH 14 (184)
T ss_pred eEEEeCCCCCCCC
Confidence 5899999999983
No 280
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=71.94 E-value=4.3 Score=40.72 Aligned_cols=61 Identities=26% Similarity=0.357 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCCCccceEEeC--CHHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPKKTSASYSLR--EPDEVMDFL 256 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~~~~A~~~~~--~~~~v~~~L 256 (274)
.|..-+..+. ++|. .|.++||+-||=..|++| ..||..+.++.-.+|.+... +-..|.+.+
T Consensus 840 qK~~Lie~lQ-kl~y------~VgfCGDGANDCgALKaA-----dvGISLSeaEASvAApFTSk~~~I~cVp~vI 902 (1140)
T KOG0208|consen 840 QKAELIEALQ-KLGY------KVGFCGDGANDCGALKAA-----DVGISLSEAEASVAAPFTSKTPSISCVPDVI 902 (1140)
T ss_pred hHHHHHHHHH-hcCc------EEEecCCCcchhhhhhhc-----ccCcchhhhhHhhcCccccCCCchhhHhHHH
Confidence 6776665544 4554 599999999999999999 67887776654455666533 444454444
No 281
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=71.32 E-value=8.5 Score=31.25 Aligned_cols=14 Identities=29% Similarity=0.636 Sum_probs=12.7
Q ss_pred cEEEEEecCccccC
Q 023990 13 QIVMFLDYDGTLSP 26 (274)
Q Consensus 13 ~~li~~DlDGTL~~ 26 (274)
.+.|+||+||||++
T Consensus 2 ik~viFDldGtL~d 15 (211)
T TIGR02247 2 IKAVIFDFGGVLLP 15 (211)
T ss_pred ceEEEEecCCceec
Confidence 46899999999998
No 282
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=70.37 E-value=2.1 Score=32.99 Aligned_cols=30 Identities=17% Similarity=-0.071 Sum_probs=24.1
Q ss_pred HHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHH
Q 023990 189 LEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 221 (274)
Q Consensus 189 l~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~ 221 (274)
..+.++.++.+++ +++.|||+.+|+.+-..
T Consensus 104 ~~k~l~~l~~~p~---~~i~i~Ds~~~~~aa~~ 133 (148)
T smart00577 104 YVKDLSLLGRDLS---NVIIIDDSPDSWPFHPE 133 (148)
T ss_pred EeecHHHcCCChh---cEEEEECCHHHhhcCcc
Confidence 5566777888876 89999999999886544
No 283
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=70.26 E-value=4.7 Score=33.41 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=18.1
Q ss_pred hccCCcEEEEEecCccccCCcc
Q 023990 8 ASKGKQIVMFLDYDGTLSPIVE 29 (274)
Q Consensus 8 ~~~~~~~li~~DlDGTL~~~~~ 29 (274)
+.++++.|++||||-|+++.++
T Consensus 8 ~~~~~ril~~FDFD~TIid~dS 29 (256)
T KOG3120|consen 8 ASSSPRILLVFDFDRTIIDQDS 29 (256)
T ss_pred cccCCcEEEEEecCceeecCCc
Confidence 3467899999999999998543
No 284
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=70.18 E-value=3.6 Score=32.29 Aligned_cols=13 Identities=38% Similarity=0.560 Sum_probs=11.3
Q ss_pred EEEEecCccccCC
Q 023990 15 VMFLDYDGTLSPI 27 (274)
Q Consensus 15 li~~DlDGTL~~~ 27 (274)
+|+||+||||++.
T Consensus 1 ~viFD~DGTL~D~ 13 (175)
T TIGR01493 1 AMVFDVYGTLVDV 13 (175)
T ss_pred CeEEecCCcCccc
Confidence 4799999999993
No 285
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=68.93 E-value=5.6 Score=32.12 Aligned_cols=14 Identities=14% Similarity=0.415 Sum_probs=12.3
Q ss_pred EEEEEecCccccCC
Q 023990 14 IVMFLDYDGTLSPI 27 (274)
Q Consensus 14 ~li~~DlDGTL~~~ 27 (274)
.+|+||+||||++.
T Consensus 1 ~~viFDldgvL~d~ 14 (199)
T PRK09456 1 MLYIFDLGNVIVDI 14 (199)
T ss_pred CEEEEeCCCccccC
Confidence 37999999999984
No 286
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=68.15 E-value=5.9 Score=34.07 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCcCCCCCeeEEEEcCC-cCCHHHHHHHHhCCCce-EEEec
Q 023990 186 GKALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKILRKREQGF-GILVS 234 (274)
Q Consensus 186 g~al~~l~~~~~~~~~~~~~vi~~GDs-~ND~~M~~~~~~~~~g~-~v~v~ 234 (274)
...+..+++.++++++ +++++||+ ..|+.+=+.+ |+ ++.|.
T Consensus 205 p~~~~~~~~~~~~~~~---~~lmIGD~~~tDI~~A~~a-----Gi~si~V~ 247 (279)
T TIGR01452 205 PYMFECITENFSIDPA---RTLMVGDRLETDILFGHRC-----GMTTVLVL 247 (279)
T ss_pred HHHHHHHHHHhCCChh---hEEEECCChHHHHHHHHHc-----CCcEEEEC
Confidence 4467778888898876 89999999 5999887766 54 55554
No 287
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=67.72 E-value=10 Score=36.28 Aligned_cols=58 Identities=12% Similarity=0.211 Sum_probs=45.1
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~ 69 (274)
....+.++++.||+++..-. -...+.|.+.++|++|++.+ .++++||.+....+.+.+
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~--~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~ 440 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFA--LEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAK 440 (562)
T ss_pred hCCCEEEEEEECCEEEEEEE--ecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHH
Confidence 34567888999999875321 12357899999999999985 899999999988777653
No 288
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=67.29 E-value=9.2 Score=33.05 Aligned_cols=36 Identities=8% Similarity=-0.092 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHcCcC-CCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFA-DCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~-~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.....+...++.++.+ ++ .+++|||+.+|+.+-+.+
T Consensus 252 p~p~~~~~~l~~~~~~~~~---~~~~vgD~~~d~~~a~~~ 288 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYD---VLLAVDDRDQVVDMWRRI 288 (300)
T ss_pred CcHHHHHHHHHHHhccCce---EEEEEcCcHHHHHHHHHh
Confidence 4445666677766663 33 799999999999999987
No 289
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=66.86 E-value=4.2 Score=32.73 Aligned_cols=16 Identities=44% Similarity=0.744 Sum_probs=13.1
Q ss_pred CcEEEEEecCccccCC
Q 023990 12 KQIVMFLDYDGTLSPI 27 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~ 27 (274)
++-.|++|+|||++-.
T Consensus 2 kk~vi~sDFDGTITl~ 17 (220)
T COG4359 2 KKPVIFSDFDGTITLN 17 (220)
T ss_pred CceEEEecCCCceEec
Confidence 4568999999999863
No 290
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=66.31 E-value=2.7 Score=39.20 Aligned_cols=55 Identities=22% Similarity=0.207 Sum_probs=39.6
Q ss_pred EEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEE
Q 023990 176 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYS 245 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~ 245 (274)
|.+|. +|-..+++-.+.-. -+...||+.||-|.|..+ ..|++|.++.. +++|+.+
T Consensus 492 eatPE---dK~~~I~~eQ~~gr-------lVAMtGDGTNDAPALAqA-----dVg~AMNsGTqAAkEAaNMV 548 (681)
T COG2216 492 EATPE---DKLALIRQEQAEGR-------LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMV 548 (681)
T ss_pred cCChH---HHHHHHHHHHhcCc-------EEEEcCCCCCcchhhhhc-----chhhhhccccHHHHHhhccc
Confidence 55666 77776666544321 589999999999999998 68999987643 4556654
No 291
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=65.71 E-value=15 Score=27.70 Aligned_cols=53 Identities=11% Similarity=0.071 Sum_probs=38.7
Q ss_pred cEEEEEecCccccCCccCCC----cCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHH
Q 023990 13 QIVMFLDYDGTLSPIVENPD----RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY 65 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~----~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~ 65 (274)
.+++.+|+|+|+.+....+. .-.+-+.....|..|++++ ..++||--+...+.
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA 75 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIA 75 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHH
Confidence 47899999999998543321 2234678899999999996 78888766665544
No 292
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=64.45 E-value=12 Score=31.76 Aligned_cols=54 Identities=20% Similarity=0.094 Sum_probs=36.1
Q ss_pred EEEEEecCccccCCccC---------------------CCcCCCChHHHHHHHHHhhc-C------CEEEEcCCCHhhHH
Q 023990 14 IVMFLDYDGTLSPIVEN---------------------PDRAFMSGKMRRAVRQLAKY-F------PTAIVTGRCRDKVY 65 (274)
Q Consensus 14 ~li~~DlDGTL~~~~~~---------------------~~~~~i~~~~~~al~~L~~~-~------~v~i~TGR~~~~l~ 65 (274)
-=|+||.|++|.+.... |-..-+-.....+|.+||+. + +++|+|.|+...-.
T Consensus 122 lRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~ 201 (264)
T PF06189_consen 122 LRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHE 201 (264)
T ss_pred eEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhH
Confidence 44899999999974321 11112334667888888865 1 58999999987654
Q ss_pred hh
Q 023990 66 DF 67 (274)
Q Consensus 66 ~~ 67 (274)
+.
T Consensus 202 Rv 203 (264)
T PF06189_consen 202 RV 203 (264)
T ss_pred HH
Confidence 43
No 293
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=64.32 E-value=2.7 Score=27.33 Aligned_cols=27 Identities=30% Similarity=0.550 Sum_probs=17.7
Q ss_pred HHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHH
Q 023990 188 ALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKI 221 (274)
Q Consensus 188 al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~ 221 (274)
=++.+++.+|+ ++.+||-.-|++|++.
T Consensus 6 DVqQLLK~fG~-------~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 6 DVQQLLKKFGI-------IIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHHTTS------------S-HHHHHHHHHH
T ss_pred HHHHHHHHCCE-------EEEeCChHHHHHHHHH
Confidence 47788898884 8999999999999764
No 294
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit.
Probab=64.06 E-value=20 Score=30.31 Aligned_cols=80 Identities=13% Similarity=0.054 Sum_probs=45.2
Q ss_pred hhhhhhhccCCcEEEEEec-CccccCCc-----cCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhh---------HH
Q 023990 2 FHEITEASKGKQIVMFLDY-DGTLSPIV-----ENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDK---------VY 65 (274)
Q Consensus 2 ~~~~~~~~~~~~~li~~Dl-DGTL~~~~-----~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~---------l~ 65 (274)
++++.+.|.+.+-.+.+|+ +|.+.... .+...........+.+++|.+.+ ..+++|+++... +.
T Consensus 113 ~~~~~~~~~~~~iv~slD~~~g~~~~~~~~~v~i~gw~~~~~~~~~~~~~~l~~~G~~~iivt~i~~~g~~~g~~~~~~~ 192 (254)
T TIGR00735 113 IYELADRFGSQCIVVAIDAKRVYVNSYCWYEVYIYGGRESTGLDAVEWAKEVEKLGAGEILLTSMDKDGTKSGYDLELTK 192 (254)
T ss_pred HHHHHHHcCCCCEEEEEEeccCCCCCCccEEEEEeCCcccCCCCHHHHHHHHHHcCCCEEEEeCcCcccCCCCCCHHHHH
Confidence 4567777755666778885 45443100 00011123455678888888885 788889987732 22
Q ss_pred hhcCccCceEeccCcc
Q 023990 66 DFVKLAELYYAGSHGM 81 (274)
Q Consensus 66 ~~~~~~~~~li~~nG~ 81 (274)
++....+.++++.+|.
T Consensus 193 ~i~~~~~ipvia~GGi 208 (254)
T TIGR00735 193 AVSEAVKIPVIASGGA 208 (254)
T ss_pred HHHHhCCCCEEEeCCC
Confidence 2222234566666665
No 295
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=63.65 E-value=7.3 Score=36.35 Aligned_cols=27 Identities=19% Similarity=0.026 Sum_probs=18.5
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHH
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMR 41 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~ 41 (274)
....+-+++|+||||+.. ....+.-++
T Consensus 5 ~~~~~~~~fD~DGTLlrs-----~ssFpyFml 31 (498)
T PLN02499 5 GTTSYSVVSELEGTLLKD-----ADPFSYFML 31 (498)
T ss_pred CcccceEEEecccceecC-----CCccHHHHH
Confidence 344567999999999982 234555555
No 296
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=62.14 E-value=8 Score=30.89 Aligned_cols=23 Identities=9% Similarity=0.001 Sum_probs=18.5
Q ss_pred CcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 197 GFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 197 ~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
+++++ ++++|||+..|+..-+.+
T Consensus 127 gl~p~---e~l~VgDs~~di~aA~~a 149 (174)
T TIGR01685 127 VLKPA---QILFFDDRTDNVREVWGY 149 (174)
T ss_pred CCCHH---HeEEEcChhHhHHHHHHh
Confidence 57765 899999999997776555
No 297
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=60.51 E-value=35 Score=30.05 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=33.3
Q ss_pred eEEEEcCCc-CCHHHHHHHHhCCCce-EEEecCC--CC-----CccceEEeCCHHHHHHHH
Q 023990 205 FPVYIGDDT-TDEDAFKILRKREQGF-GILVSKF--PK-----KTSASYSLREPDEVMDFL 256 (274)
Q Consensus 205 ~vi~~GDs~-ND~~M~~~~~~~~~g~-~v~v~na--~~-----~~~A~~~~~~~~~v~~~L 256 (274)
+++++||+. .|+.+=+.+ |+ ++.|..+ .. .-.+++++++..++..+|
T Consensus 265 ~~~mIGD~~~tDI~ga~~~-----G~~silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 265 ALYMVGDNPASDIIGAQNY-----GWFSCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred eEEEEcCChhhhhhhHHhC-----CceEEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 799999997 999877766 54 7777553 11 123578888888776654
No 298
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=60.14 E-value=15 Score=38.02 Aligned_cols=18 Identities=33% Similarity=0.518 Sum_probs=15.6
Q ss_pred ccCCcEEEEEecCccccC
Q 023990 9 SKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 9 ~~~~~~li~~DlDGTL~~ 26 (274)
...+.+.++||+||||++
T Consensus 71 ~~~~ikaVIFDlDGTLiD 88 (1057)
T PLN02919 71 EWGKVSAVLFDMDGVLCN 88 (1057)
T ss_pred cCCCCCEEEECCCCCeEe
Confidence 355778999999999999
No 299
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=59.99 E-value=11 Score=28.81 Aligned_cols=61 Identities=20% Similarity=0.315 Sum_probs=39.3
Q ss_pred EEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCH--hhHHhhcCccCceEeccCcceEeCCCC
Q 023990 15 VMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCR--DKVYDFVKLAELYYAGSHGMDIKGPTK 88 (274)
Q Consensus 15 li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~--~~l~~~~~~~~~~li~~nG~~i~~~~~ 88 (274)
+-++||||.++.-.+.+ .+ ..-+.++.+.+.+ .+++||--.. ..++++. ..-|+.+|.|+.
T Consensus 45 iAildL~G~~l~l~S~R---~~--~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia--------~~f~A~ly~P~~ 108 (138)
T PF04312_consen 45 IAILDLDGELLDLKSSR---NM--SRSEVIEWISEYGKPVIVATDVSPPPETVKKIA--------RSFNAVLYTPER 108 (138)
T ss_pred EEEEecCCcEEEEEeec---CC--CHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHH--------HHhCCcccCCCC
Confidence 45799999999754322 22 3567788888887 7899986543 3444433 334666777753
No 300
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=59.31 E-value=9.3 Score=34.36 Aligned_cols=48 Identities=21% Similarity=0.273 Sum_probs=32.6
Q ss_pred cCCcEEEEEecCccccCCcc------CCCc-CCCChHHHHHHHHHhhcC-CEEEEc
Q 023990 10 KGKQIVMFLDYDGTLSPIVE------NPDR-AFMSGKMRRAVRQLAKYF-PTAIVT 57 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~------~~~~-~~i~~~~~~al~~L~~~~-~v~i~T 57 (274)
+...+++.||+||||++..+ .+.+ ..+.++.-.-|..|.+.+ .++|.|
T Consensus 72 ~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~ift 127 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFT 127 (422)
T ss_pred CCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEe
Confidence 66779999999999997332 1111 234566677788888775 566655
No 301
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=58.31 E-value=11 Score=33.70 Aligned_cols=36 Identities=22% Similarity=0.084 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
-|-..+..+++.+++.++ +++.+||+.+|+..=+.+
T Consensus 105 P~p~~l~~a~~~l~v~~~---~svmIGDs~sDi~aAk~a 140 (354)
T PRK05446 105 PKTGLVEEYLAEGAIDLA---NSYVIGDRETDVQLAENM 140 (354)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHC
Confidence 456678888888888876 799999999998877666
No 302
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=57.34 E-value=9.6 Score=30.15 Aligned_cols=26 Identities=23% Similarity=0.282 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCc
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDT 213 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~ 213 (274)
-+.|+++.++.++++++ +++.+||..
T Consensus 95 ~~~~fr~Al~~m~l~~~---~vvmVGDqL 120 (175)
T COG2179 95 FGRAFRRALKEMNLPPE---EVVMVGDQL 120 (175)
T ss_pred cHHHHHHHHHHcCCChh---HEEEEcchh
Confidence 47899999999999987 899999985
No 303
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.
Probab=55.90 E-value=28 Score=29.08 Aligned_cols=77 Identities=12% Similarity=0.045 Sum_probs=45.2
Q ss_pred hhhhhhhccCCcEEEEEecC------ccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCH---------hhHH
Q 023990 2 FHEITEASKGKQIVMFLDYD------GTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCR---------DKVY 65 (274)
Q Consensus 2 ~~~~~~~~~~~~~li~~DlD------GTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~---------~~l~ 65 (274)
|.++.+.+.+.+-.+.+|+= +++..... ...-...+.+.++.+.+.+ ..+++||+.. ..+.
T Consensus 110 ~~~i~~~~~~~~i~~~ld~k~~~~~~~~v~~~~~---~~~~~~~~~~~~~~l~~~G~d~i~v~~i~~~g~~~g~~~~~i~ 186 (243)
T cd04731 110 IREIAKRFGSQCVVVSIDAKRRGDGGYEVYTHGG---RKPTGLDAVEWAKEVEELGAGEILLTSMDRDGTKKGYDLELIR 186 (243)
T ss_pred HHHHHHHcCCCCEEEEEEeeecCCCceEEEEcCC---ceecCCCHHHHHHHHHHCCCCEEEEeccCCCCCCCCCCHHHHH
Confidence 55677777655666777752 66554211 1112345677778888775 8888888875 2233
Q ss_pred hhcCccCceEeccCcc
Q 023990 66 DFVKLAELYYAGSHGM 81 (274)
Q Consensus 66 ~~~~~~~~~li~~nG~ 81 (274)
++....+.++++.+|.
T Consensus 187 ~i~~~~~~pvia~GGi 202 (243)
T cd04731 187 AVSSAVNIPVIASGGA 202 (243)
T ss_pred HHHhhCCCCEEEeCCC
Confidence 3333334567776665
No 304
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=54.77 E-value=31 Score=28.74 Aligned_cols=45 Identities=29% Similarity=0.408 Sum_probs=30.4
Q ss_pred EeCCCCC-CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcC--CHHHHHHHHhC
Q 023990 177 IRPKIEW-DKGKALEFLLECLGFADCSNVFPVYIGDDTT--DEDAFKILRKR 225 (274)
Q Consensus 177 i~p~~~~-sKg~al~~l~~~~~~~~~~~~~vi~~GDs~N--D~~M~~~~~~~ 225 (274)
..|. ++ ..-.|++++.+++....+ =|+.|+|+.| |+++|+.+++.
T Consensus 72 ~~~r-g~~qRn~AL~~ir~~~~~~~~---GVVyFADDdN~Ysl~lF~emR~i 119 (223)
T cd00218 72 LKPR-GVEQRNLALRWIREHLSAKLD---GVVYFADDDNTYDLELFEEMRKI 119 (223)
T ss_pred CCcc-cHHHHHHHHHHHHhccccCcc---eEEEEccCCCcccHHHHHHHhcc
Confidence 3445 33 344677777776532222 5999999888 89999998763
No 305
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=52.88 E-value=23 Score=30.04 Aligned_cols=27 Identities=26% Similarity=0.429 Sum_probs=20.9
Q ss_pred Chhhhhhhc--cCCcEEEEEecCccccCC
Q 023990 1 MFHEITEAS--KGKQIVMFLDYDGTLSPI 27 (274)
Q Consensus 1 ~~~~~~~~~--~~~~~li~~DlDGTL~~~ 27 (274)
.|++|.+.. ..+..|++||+|.||+..
T Consensus 6 s~~eV~~~~~~~~~~tLvvfDiDdTLi~~ 34 (252)
T PF11019_consen 6 SFHEVQDYLENADQDTLVVFDIDDTLITP 34 (252)
T ss_pred CHHHHHHHHHcCCCCeEEEEEcchhhhcC
Confidence 367775555 338899999999999974
No 306
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=52.20 E-value=42 Score=29.05 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=17.8
Q ss_pred hhhhccCCcEEEEEecCccccCC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPI 27 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~ 27 (274)
++.......-++++|.||-+...
T Consensus 187 lA~~l~Ad~Li~lTDVdGVy~~d 209 (284)
T cd04256 187 LAVELKADLLILLSDVDGLYDGP 209 (284)
T ss_pred HHHHcCCCEEEEEeCCCeeecCC
Confidence 44555777788899999999864
No 307
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=51.76 E-value=22 Score=29.64 Aligned_cols=36 Identities=22% Similarity=0.054 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeE-EEEcCCc-CCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFP-VYIGDDT-TDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~v-i~~GDs~-ND~~M~~~~ 222 (274)
-+-...+.+++.++.++. ++ +.+||+. +|+.+=+.+
T Consensus 189 P~~~~~~~~~~~~~~~~~---~~~~~IGD~~~~Di~~A~~~ 226 (236)
T TIGR01460 189 PSPAIYRAALNLLQARPE---RRDVMVGDNLRTDILGAKNA 226 (236)
T ss_pred CCHHHHHHHHHHhCCCCc---cceEEECCCcHHHHHHHHHC
Confidence 345677888888887765 55 9999998 899876665
No 308
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=51.67 E-value=13 Score=36.93 Aligned_cols=27 Identities=26% Similarity=0.336 Sum_probs=22.8
Q ss_pred eEEEEcCCcCCHHHHHHHHhCCCceEEEecCC
Q 023990 205 FPVYIGDDTTDEDAFKILRKREQGFGILVSKF 236 (274)
Q Consensus 205 ~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na 236 (274)
.++.+||+.||...|+.+ ..||+.=|+
T Consensus 808 ~TLMCGDGTNDVGALK~A-----hVGVALL~~ 834 (1160)
T KOG0209|consen 808 VTLMCGDGTNDVGALKQA-----HVGVALLNN 834 (1160)
T ss_pred EEEEecCCCcchhhhhhc-----ccceehhcC
Confidence 689999999999999998 678875443
No 309
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=51.34 E-value=15 Score=28.90 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=26.6
Q ss_pred HHHHHHHHHHcC--cCCCCCeeEEEEcCCc--------CCHHHHHHH
Q 023990 186 GKALEFLLECLG--FADCSNVFPVYIGDDT--------TDEDAFKIL 222 (274)
Q Consensus 186 g~al~~l~~~~~--~~~~~~~~vi~~GDs~--------ND~~M~~~~ 222 (274)
...++++++.++ ++++ +++.+||+. +|+..=+.+
T Consensus 111 p~~~~~~~~~~~~~~~~~---~~v~VGD~~~~~~~~~~~Di~aA~~a 154 (166)
T TIGR01664 111 TGMWEYLQSQYNSPIKMT---RSFYVGDAAGRKLDFSDADIKFAKNL 154 (166)
T ss_pred cHHHHHHHHHcCCCCCch---hcEEEECCCCCCCCCchhHHHHHHHC
Confidence 557888999998 7775 799999986 587765554
No 310
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=50.56 E-value=31 Score=26.86 Aligned_cols=37 Identities=19% Similarity=0.090 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
=|...++.|.+.+.... ...+++|||..+|.++.+.+
T Consensus 102 ~K~~~l~~i~~~~~~~~--~~f~~~~gn~~~D~~~y~~~ 138 (157)
T smart00775 102 FKIACLRDIKSLFPPQG--NPFYAGFGNRITDVISYSAV 138 (157)
T ss_pred HHHHHHHHHHHhcCCCC--CCEEEEeCCCchhHHHHHHc
Confidence 48889999998765221 12678899999999999987
No 311
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=49.56 E-value=30 Score=28.49 Aligned_cols=44 Identities=25% Similarity=0.351 Sum_probs=23.4
Q ss_pred eCCCCC-CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcC--CHHHHHHHHhC
Q 023990 178 RPKIEW-DKGKALEFLLECLGFADCSNVFPVYIGDDTT--DEDAFKILRKR 225 (274)
Q Consensus 178 ~p~~~~-sKg~al~~l~~~~~~~~~~~~~vi~~GDs~N--D~~M~~~~~~~ 225 (274)
.|. |+ ..-.|+++|........ +=|+.|+|+.| |+++|+.++..
T Consensus 55 ~~r-g~~qRn~AL~~ir~~~~~~~---~GVVyFaDDdNtYdl~LF~emR~~ 101 (207)
T PF03360_consen 55 KPR-GVHQRNAALRWIRNNANHRL---DGVVYFADDDNTYDLRLFDEMRKT 101 (207)
T ss_dssp --T-SHHHHHHHHHHHHSTTTSSS----EEEEE--TTSEE-HHHHHHHCT-
T ss_pred ccc-cHHHHHHHHHHHHhcccCCC---CcEEEECCCCCeeeHHHHHHHHhh
Confidence 344 44 23445666552222222 25999999999 99999998754
No 312
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=49.11 E-value=22 Score=36.55 Aligned_cols=34 Identities=15% Similarity=-0.025 Sum_probs=30.1
Q ss_pred CCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 35 FMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 35 ~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
.+-+++.++|++|++.+ .++++|||+...+..+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia 602 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA 602 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 56789999999999995 99999999999887764
No 313
>PTZ00489 glutamate 5-kinase; Provisional
Probab=48.63 E-value=69 Score=27.43 Aligned_cols=22 Identities=23% Similarity=0.397 Sum_probs=17.2
Q ss_pred hhhhccCCcEEEEEecCccccC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~ 26 (274)
++...++..-++++|.||-+..
T Consensus 156 lA~~l~Ad~LiilTDVdGVy~~ 177 (264)
T PTZ00489 156 VAHHFKADLLVILSDIDGYYTE 177 (264)
T ss_pred HHHHhCCCEEEEeeccCeeEcC
Confidence 4455577778899999999975
No 314
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=47.34 E-value=25 Score=29.55 Aligned_cols=42 Identities=33% Similarity=0.411 Sum_probs=31.9
Q ss_pred HHHHHHHHHcCcCCCCCeeEEEEcC-CcCCHHHHHHHHhCCCce-EEEecCC
Q 023990 187 KALEFLLECLGFADCSNVFPVYIGD-DTTDEDAFKILRKREQGF-GILVSKF 236 (274)
Q Consensus 187 ~al~~l~~~~~~~~~~~~~vi~~GD-s~ND~~M~~~~~~~~~g~-~v~v~na 236 (274)
.--+..++.++..++ +++.+|| -.||++-=+.+ |+ ++.|.|.
T Consensus 172 ~If~~al~~l~v~Pe---e~vhIgD~l~nD~~gA~~~-----G~~ailv~~~ 215 (237)
T KOG3085|consen 172 RIFQLALERLGVKPE---ECVHIGDLLENDYEGARNL-----GWHAILVDNS 215 (237)
T ss_pred HHHHHHHHHhCCChH---HeEEecCccccccHhHHHc-----CCEEEEEccc
Confidence 345677888999887 8999999 46897766666 64 7788874
No 315
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=47.16 E-value=48 Score=23.78 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcC-CcCCHHHHHHHH
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGD-DTTDEDAFKILR 223 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GD-s~ND~~M~~~~~ 223 (274)
.|-..++++++.+.-. ..+.+|| ++-|.+.-..+.
T Consensus 50 ~K~~~i~~i~~~fP~~-----kfiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 50 HKRDNIERILRDFPER-----KFILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred HHHHHHHHHHHHCCCC-----cEEEEeeCCCcCHHHHHHHH
Confidence 7999999999988643 5899999 456988765543
No 316
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=46.08 E-value=13 Score=31.83 Aligned_cols=17 Identities=29% Similarity=0.296 Sum_probs=14.9
Q ss_pred cCCcEEEEEecCccccC
Q 023990 10 KGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~ 26 (274)
..+++.+++|||.||+.
T Consensus 86 ~~~kk~lVLDLDeTLvH 102 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVH 102 (262)
T ss_pred cCCCceEEEeCCCcccc
Confidence 56779999999999876
No 317
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=45.83 E-value=17 Score=27.77 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=28.7
Q ss_pred CCCChHHHHHHHHHhhc-CCEEEEcCCCHhhHHhhc
Q 023990 34 AFMSGKMRRAVRQLAKY-FPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 34 ~~i~~~~~~al~~L~~~-~~v~i~TGR~~~~l~~~~ 68 (274)
..+.+.+.++|++|+++ ..++++|+.+...+...+
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l 111 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVL 111 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccc
Confidence 45677899999999977 589999999988776654
No 318
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=45.58 E-value=79 Score=26.72 Aligned_cols=24 Identities=17% Similarity=0.358 Sum_probs=19.5
Q ss_pred hhhhhccCCcEEEEEecCccccCC
Q 023990 4 EITEASKGKQIVMFLDYDGTLSPI 27 (274)
Q Consensus 4 ~~~~~~~~~~~li~~DlDGTL~~~ 27 (274)
++++.....+-++++|.||.+-..
T Consensus 155 ~LA~~l~pd~v~f~tdVdGVy~~~ 178 (252)
T COG1608 155 HLAKELKPDRVIFLTDVDGVYDRD 178 (252)
T ss_pred HHHHHhCCCEEEEEecCCceecCC
Confidence 456667788889999999999863
No 319
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=45.49 E-value=8.6 Score=28.97 Aligned_cols=70 Identities=21% Similarity=0.345 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHH-HHHHHhCCCceEEEecCC-----------CCC---ccceEEeCC
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDA-FKILRKREQGFGILVSKF-----------PKK---TSASYSLRE 248 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M-~~~~~~~~~g~~v~v~na-----------~~~---~~A~~~~~~ 248 (274)
.||.-+..+..+..+...+ --|+-|||..--... |.+ ||++++|.+ +-+ ..|..++.+
T Consensus 56 ~k~a~iN~iRT~~li~~aD-vVVvrFGekYKQWNaAfDA------g~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et 128 (141)
T PF11071_consen 56 HKGAKINAIRTRTLIEKAD-VVVVRFGEKYKQWNAAFDA------GYAAALGKPLITLHPEELHHPLKEVDAAALAVAET 128 (141)
T ss_pred chhhhhhHHHHHHHHhhCC-EEEEEechHHHHHHHHhhH------HHHHHcCCCeEEecchhccccHHHHhHhhHhhhCC
Confidence 4455555555555444331 257889997532221 221 555555543 112 356677889
Q ss_pred HHHHHHHHHHHH
Q 023990 249 PDEVMDFLQKLV 260 (274)
Q Consensus 249 ~~~v~~~L~~l~ 260 (274)
++.|.+.|..++
T Consensus 129 ~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 129 PEQVVEILRYVL 140 (141)
T ss_pred HHHHHHHHHHHh
Confidence 999999888765
No 320
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=45.07 E-value=15 Score=30.63 Aligned_cols=29 Identities=17% Similarity=0.047 Sum_probs=22.6
Q ss_pred HHHHHcCcCC-CCCeeEEEEcCCcCCHHHHHHH
Q 023990 191 FLLECLGFAD-CSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 191 ~l~~~~~~~~-~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
..++.+|.++ + .+++|.|+.+=+.+-.++
T Consensus 159 ~A~~~l~~~~~~---k~lVfeds~~Gv~aa~aa 188 (222)
T KOG2914|consen 159 KAAKRLGVPPPS---KCLVFEDSPVGVQAAKAA 188 (222)
T ss_pred HHHHhcCCCCcc---ceEEECCCHHHHHHHHhc
Confidence 3445567666 4 899999999998888887
No 321
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=42.83 E-value=39 Score=28.17 Aligned_cols=48 Identities=19% Similarity=0.232 Sum_probs=32.9
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcC--CCHhhHHhhcC
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTG--RCRDKVYDFVK 69 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TG--R~~~~l~~~~~ 69 (274)
-..+++.|+|||+... +.+.+.++++.+.. .-+.++| |+.+.++.++.
T Consensus 43 ~~~l~ivDldga~~g~----------~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 43 VDKIHVVDLDGAFEGK----------PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CCEEEEEECcchhcCC----------cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 5678999999999652 12577888888774 3344554 56677777663
No 322
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=42.01 E-value=54 Score=27.17 Aligned_cols=64 Identities=16% Similarity=0.197 Sum_probs=37.3
Q ss_pred hhhhccCCcEEEEEecCccccCCcc-CCCcCC---CC-hHH---------HHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVE-NPDRAF---MS-GKM---------RRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~-~~~~~~---i~-~~~---------~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
++...+...-++++|.||-+..... .|+... ++ .+. ..+++.+.+.+ .++|+.|+....+...+
T Consensus 141 lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l 219 (229)
T cd04239 141 RAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGLKVMDATALTLCRRNKIPIIVFNGLKPGNLLRAL 219 (229)
T ss_pred HHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhcCCccHHHHHHHHHCCCeEEEECCCChhHHHHHH
Confidence 4555677778889999999975321 111111 12 111 12333344443 78888898877777665
No 323
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=41.62 E-value=31 Score=29.57 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=25.2
Q ss_pred EeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHH
Q 023990 177 IRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDA 218 (274)
Q Consensus 177 i~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M 218 (274)
+.+. +-+|....+.+.+.++ -++.|||..+|+.-
T Consensus 170 lr~~-~~~K~~rr~~I~~~y~-------Ivl~vGD~~~Df~~ 203 (266)
T TIGR01533 170 LKKD-KSSKESRRQKVQKDYE-------IVLLFGDNLLDFDD 203 (266)
T ss_pred eCCC-CCCcHHHHHHHHhcCC-------EEEEECCCHHHhhh
Confidence 4445 5678888887777554 38999999999853
No 324
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=41.41 E-value=89 Score=26.71 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=17.7
Q ss_pred hhhhccCCcEEEEEecCccccCC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPI 27 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~ 27 (274)
|+...++..-+|++|.||-+...
T Consensus 163 lA~~l~Ad~liilTDVdGVy~~d 185 (266)
T PRK12314 163 VAKLVKADLLIILSDIDGLYDKN 185 (266)
T ss_pred HHHHhCCCEEEEEeCCCcccCCC
Confidence 44555777788999999999753
No 325
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=41.12 E-value=17 Score=35.18 Aligned_cols=60 Identities=22% Similarity=0.258 Sum_probs=43.2
Q ss_pred eEEEEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCceEEEecCCCC--CccceEEeC
Q 023990 173 MVMEIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGFGILVSKFPK--KTSASYSLR 247 (274)
Q Consensus 173 ~~iei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~~v~v~na~~--~~~A~~~~~ 247 (274)
.|-.+.|. .|-.-++.|.+.-. .+-.-||+.||-|.++.+ ..|++|+++.. +.+++.++.
T Consensus 564 gfAgVfpe---hKy~iV~~Lq~r~h-------i~gmtgdgvndapaLKkA-----digiava~atdaar~asdiVlt 625 (942)
T KOG0205|consen 564 GFAGVFPE---HKYEIVKILQERKH-------IVGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLT 625 (942)
T ss_pred CccccCHH---HHHHHHHHHhhcCc-------eecccCCCcccchhhccc-----ccceeeccchhhhcccccEEEc
Confidence 34455565 67666666655432 467789999999999998 78999998754 356777764
No 326
>TIGR00071 hisT_truA pseudouridylate synthase I. universal so far, single copy in all prokaryotes, 3 in yeast. Trusted cutoff for orthology is about 100 based on 1 match only in complete prokaryote with length 200.
Probab=40.95 E-value=42 Score=27.97 Aligned_cols=55 Identities=22% Similarity=0.359 Sum_probs=39.8
Q ss_pred EEEEEecCcccc-CCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 14 IVMFLDYDGTLS-PIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 14 ~li~~DlDGTL~-~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
.++.+=+|||=+ .+..+|+..++..+..++|.++..+..-++.+||.-..+-.+.
T Consensus 3 ~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~~ 58 (227)
T TIGR00071 3 IALKIAYDGSNYHGWQRQPNKRTVQGELEKALEAIGKKKITIMSAGRTDKGVHAMG 58 (227)
T ss_pred EEEEEEEcCCCeeEEeECcCCCCHHHHHHHHHHHHhCCCeeEEeeccCcCCccccc
Confidence 457778999955 4544455567888889999888765545788999887766543
No 327
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=39.49 E-value=37 Score=28.61 Aligned_cols=17 Identities=24% Similarity=0.163 Sum_probs=14.7
Q ss_pred cCCcEEEEEecCccccC
Q 023990 10 KGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~ 26 (274)
..+.|+++||++|||+.
T Consensus 4 ~~~iravtfD~~~tLl~ 20 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLA 20 (237)
T ss_pred ccceEEEEEeCCCceee
Confidence 45678999999999986
No 328
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=39.38 E-value=50 Score=31.37 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=41.0
Q ss_pred cEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc-C-CEEEEcCCCHhhHHhhc
Q 023990 13 QIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-F-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 13 ~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~-~-~v~i~TGR~~~~l~~~~ 68 (274)
.+.++.-.||++...-. ....+-+.+.++|++|++. . +++++||.+......++
T Consensus 342 ~~~~~v~~~~~~~g~i~--~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~ 397 (536)
T TIGR01512 342 KTIVHVARDGTYLGYIL--LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA 397 (536)
T ss_pred CeEEEEEECCEEEEEEE--EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHH
Confidence 35566667888765321 1236789999999999998 5 79999999998887765
No 329
>PRK02083 imidazole glycerol phosphate synthase subunit HisF; Provisional
Probab=39.33 E-value=96 Score=26.11 Aligned_cols=77 Identities=12% Similarity=0.031 Sum_probs=41.7
Q ss_pred hhhhhhhccCCcEEEEEecCc-------cccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCH---------hhH
Q 023990 2 FHEITEASKGKQIVMFLDYDG-------TLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCR---------DKV 64 (274)
Q Consensus 2 ~~~~~~~~~~~~~li~~DlDG-------TL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~---------~~l 64 (274)
|+++.+.+.+.+.++.+|+-+ ++..... ...-.....+.++++.+.+ .-+++|+... ..+
T Consensus 113 ~~ei~~~~g~~~iv~slD~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~~~~~~~g~~~ii~~~i~~~g~~~g~d~~~i 189 (253)
T PRK02083 113 ISEAADRFGSQCIVVAIDAKRDPEPGRWEVYTHGG---RKPTGLDAVEWAKEVEELGAGEILLTSMDRDGTKNGYDLELT 189 (253)
T ss_pred HHHHHHHcCCCCEEEEEEeccCCCCCCEEEEEcCC---ceecCCCHHHHHHHHHHcCCCEEEEcCCcCCCCCCCcCHHHH
Confidence 567777775555666678653 4433111 0111224566677777775 5666666332 233
Q ss_pred HhhcCccCceEeccCcc
Q 023990 65 YDFVKLAELYYAGSHGM 81 (274)
Q Consensus 65 ~~~~~~~~~~li~~nG~ 81 (274)
.++....+.++++++|.
T Consensus 190 ~~~~~~~~ipvia~GGv 206 (253)
T PRK02083 190 RAVSDAVNVPVIASGGA 206 (253)
T ss_pred HHHHhhCCCCEEEECCC
Confidence 33333334678887776
No 330
>PRK14558 pyrH uridylate kinase; Provisional
Probab=39.28 E-value=63 Score=26.83 Aligned_cols=64 Identities=13% Similarity=0.094 Sum_probs=36.9
Q ss_pred hhhhccCCcEEEEEecCccccCCcc-CCCcCC---CC-hHHH---------HHHHHHhhc-CCEEEEcCCCHhhHHhhc
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVE-NPDRAF---MS-GKMR---------RAVRQLAKY-FPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~-~~~~~~---i~-~~~~---------~al~~L~~~-~~v~i~TGR~~~~l~~~~ 68 (274)
++....+..-++++|.||-...... .|+... ++ .++. ++++-+++. ..++|++|+....+...+
T Consensus 141 lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~gi~v~I~ng~~~~~l~~~l 219 (231)
T PRK14558 141 RAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKMGLKVMDTEAFSICKKYGITILVINFFEPGNLLKAL 219 (231)
T ss_pred HHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHcCcccccHHHHHHHHHCCCCEEEEeCCCCCHHHHHH
Confidence 3445577778889999999986321 222222 22 1111 333334444 378888888766666655
No 331
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=38.29 E-value=23 Score=29.78 Aligned_cols=17 Identities=24% Similarity=0.389 Sum_probs=15.2
Q ss_pred EEEEcCCcCCHHHHHHH
Q 023990 206 PVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 206 vi~~GDs~ND~~M~~~~ 222 (274)
++.+||+.+|+.+-+.+
T Consensus 187 ~I~IGDs~~Di~aA~~A 203 (237)
T PRK11009 187 RIFYGDSDNDITAAREA 203 (237)
T ss_pred eEEEcCCHHHHHHHHHc
Confidence 78899999999888777
No 332
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=38.08 E-value=97 Score=26.59 Aligned_cols=65 Identities=18% Similarity=0.285 Sum_probs=38.4
Q ss_pred hhhhhccCCcEEEEEecCccccCCccCCC------------------cCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhH
Q 023990 4 EITEASKGKQIVMFLDYDGTLSPIVENPD------------------RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKV 64 (274)
Q Consensus 4 ~~~~~~~~~~~li~~DlDGTL~~~~~~~~------------------~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l 64 (274)
+|+.+..+.+-++++|.+|-|-+..+... ..-+-++...+++.+..-. .+.|++||....+
T Consensus 170 ~iA~aLkAekLi~ltdv~Gvl~~~~~~s~i~~~~~~~~~~li~~~~i~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~l 249 (265)
T COG0548 170 ALAAALKAEKLILLTDVPGVLDDKGDPSLISELDAEEAEELIEQGIITGGMIPKVEAALEALESGVRRVHIISGRVPHSL 249 (265)
T ss_pred HHHHHcCCCeEEEEeCCcccccCCCCceeeccCCHHHHHHHHhcCCccCccHHHHHHHHHHHHhCCCeEEEecCCCcchH
Confidence 35566688899999999999987442000 1112244444555555443 6777777776663
Q ss_pred -Hhhc
Q 023990 65 -YDFV 68 (274)
Q Consensus 65 -~~~~ 68 (274)
.++|
T Consensus 250 l~eLF 254 (265)
T COG0548 250 LLELF 254 (265)
T ss_pred HHHHh
Confidence 3344
No 333
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=37.66 E-value=25 Score=29.56 Aligned_cols=17 Identities=29% Similarity=0.257 Sum_probs=14.8
Q ss_pred EEEEcCCcCCHHHHHHH
Q 023990 206 PVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 206 vi~~GDs~ND~~M~~~~ 222 (274)
++++||+.||+..-+.+
T Consensus 187 ~i~vGDs~~DI~aAk~A 203 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEA 203 (237)
T ss_pred eEEEeCCHHHHHHHHHC
Confidence 78999999999877766
No 334
>PRK00358 pyrH uridylate kinase; Provisional
Probab=36.75 E-value=78 Score=26.21 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=36.9
Q ss_pred hhhhccCCcEEEEEecCccccCCc-cCCCcCC---CChH-H---------HHHHHHHhhc-CCEEEEcCCCHhhHHhhc
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIV-ENPDRAF---MSGK-M---------RRAVRQLAKY-FPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~-~~~~~~~---i~~~-~---------~~al~~L~~~-~~v~i~TGR~~~~l~~~~ 68 (274)
++...++..-++++|.||-+.... ..|+... ++.+ . ..+++.+.+. ..++|++|+....+..++
T Consensus 143 lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~~i~v~I~~g~~~~~l~~~l 221 (231)
T PRK00358 143 RAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEKGLKVMDATAISLARDNKIPIIVFNMNKPGNLKRVV 221 (231)
T ss_pred HHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHcCCcchhHHHHHHHHHcCCcEEEECCCCchHHHHHH
Confidence 455567777788999999997422 1122112 2211 0 1233333344 378888888777777766
No 335
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=36.51 E-value=90 Score=27.43 Aligned_cols=47 Identities=26% Similarity=0.377 Sum_probs=29.9
Q ss_pred HHHHHHHHHHc-CcCCCCCeeEEEEcCCcC--CHHHHHHHHhCCCceEE-EecC
Q 023990 186 GKALEFLLECL-GFADCSNVFPVYIGDDTT--DEDAFKILRKREQGFGI-LVSK 235 (274)
Q Consensus 186 g~al~~l~~~~-~~~~~~~~~vi~~GDs~N--D~~M~~~~~~~~~g~~v-~v~n 235 (274)
-.|+++|.++. +.... +-|+.|+|+.| |+++|+.+++.. .+|+ .||.
T Consensus 165 n~aL~~ir~~~~~~~~~--~GVVyFADDdN~YdleLF~eiR~v~-~~gvWpVg~ 215 (330)
T KOG1476|consen 165 NMALRWIRSRILRHHKL--EGVVYFADDDNTYDLELFEEIRNVK-KFGVWPVGL 215 (330)
T ss_pred HHHHHHHHHhccccccc--ceEEEEccCCcchhHHHHHHHhccc-eeeeEeeee
Confidence 45777776432 22111 25999999888 999999987642 4555 3443
No 336
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=36.27 E-value=48 Score=27.96 Aligned_cols=23 Identities=13% Similarity=0.294 Sum_probs=17.9
Q ss_pred hhhhccCCcEEEEEecCccccCC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPI 27 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~ 27 (274)
++....+..-+|++|.||-+...
T Consensus 151 lA~~l~Ad~liilTDVdGvy~~d 173 (251)
T cd04242 151 VAGLVNADLLILLSDVDGLYDKN 173 (251)
T ss_pred HHHHcCCCEEEEecCcCEEEeCC
Confidence 44555777788999999999763
No 337
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=35.61 E-value=86 Score=26.23 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=9.2
Q ss_pred hhhhhhhccCCcEEEEEec
Q 023990 2 FHEITEASKGKQIVMFLDY 20 (274)
Q Consensus 2 ~~~~~~~~~~~~~li~~Dl 20 (274)
++++.+.|. .+.++.+|.
T Consensus 115 l~~~~~~fg-~~ivvslD~ 132 (234)
T PRK13587 115 LKEMAHTFP-GRIYLSVDA 132 (234)
T ss_pred HHHHHHHcC-CCEEEEEEe
Confidence 344555553 335566664
No 338
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=35.19 E-value=86 Score=22.78 Aligned_cols=32 Identities=9% Similarity=0.163 Sum_probs=27.1
Q ss_pred ChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 37 SGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 37 ~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
+.+..+.++.+++++ .++.+|+.+...+.+..
T Consensus 66 ~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~a 98 (131)
T PF01380_consen 66 TRELIELLRFAKERGAPVILITSNSESPLARLA 98 (131)
T ss_dssp THHHHHHHHHHHHTTSEEEEEESSTTSHHHHHS
T ss_pred chhhhhhhHHHHhcCCeEEEEeCCCCCchhhhC
Confidence 467999999998885 89999999888888776
No 339
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=35.00 E-value=56 Score=27.26 Aligned_cols=35 Identities=17% Similarity=-0.029 Sum_probs=25.6
Q ss_pred HHHHHHHHHHcCcCCCCCeeEEEEcCC-cCCHHHHHHH
Q 023990 186 GKALEFLLECLGFADCSNVFPVYIGDD-TTDEDAFKIL 222 (274)
Q Consensus 186 g~al~~l~~~~~~~~~~~~~vi~~GDs-~ND~~M~~~~ 222 (274)
....+.+++.++.... ++++++||+ .+|+.+=+.+
T Consensus 198 ~~~~~~~~~~~~~~~~--~~~~~vGD~~~~Di~~a~~~ 233 (242)
T TIGR01459 198 PAIFHKALKECSNIPK--NRMLMVGDSFYTDILGANRL 233 (242)
T ss_pred HHHHHHHHHHcCCCCc--ccEEEECCCcHHHHHHHHHC
Confidence 4566777888875422 279999999 6998876665
No 340
>PRK12686 carbamate kinase; Reviewed
Probab=34.82 E-value=63 Score=28.43 Aligned_cols=61 Identities=10% Similarity=0.140 Sum_probs=39.1
Q ss_pred hhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
|+....+..-+|++|.||-+.+.. .|+...++.-..+.++++.+.+. +.||.....++..+
T Consensus 219 LA~~L~Ad~LIiLTDVdGVy~~~~-~p~ak~I~~I~~~e~~~li~~g~--~~tGGM~pKveAA~ 279 (312)
T PRK12686 219 LAEQIDADLLIILTGVENVFINFN-KPNQQKLDDITVAEAKQYIAEGQ--FAPGSMLPKVEAAI 279 (312)
T ss_pred HHHHcCCCEEEEEeCchhhccCCC-CCCCeECCccCHHHHHHHhhCCC--ccCCCcHHHHHHHH
Confidence 455567778889999999998643 23323344433445666665554 46898887776543
No 341
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=34.75 E-value=69 Score=31.49 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=42.1
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
+...+.+++-.|++++..-. =...+-+++.+++++|++.+ +++++||-.......+.
T Consensus 423 ~~G~r~l~va~~~~~lG~i~--l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA 480 (675)
T TIGR01497 423 RQGGTPLVVCEDNRIYGVIY--LKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480 (675)
T ss_pred hCCCeEEEEEECCEEEEEEE--ecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 44456666667888774221 12357899999999999995 89999999988777664
No 342
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=34.71 E-value=72 Score=31.75 Aligned_cols=58 Identities=10% Similarity=0.143 Sum_probs=43.9
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~ 69 (274)
....+.+++=.||+++..-. -...+-+++.++|++|++.+ .++++||.+......+.+
T Consensus 545 ~~g~~~v~va~~~~~~g~i~--l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~ 603 (741)
T PRK11033 545 SAGKTVVLVLRNDDVLGLIA--LQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAG 603 (741)
T ss_pred hCCCEEEEEEECCEEEEEEE--EecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 44567777778898774211 12357899999999999995 899999999988877653
No 343
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=34.47 E-value=51 Score=27.48 Aligned_cols=32 Identities=25% Similarity=0.381 Sum_probs=22.6
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHH
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQ 46 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~ 46 (274)
..+.+.++||+|.||++.+ ..+....++-|.+
T Consensus 12 ~~~~~~l~FDiDdtLYp~S-----t~i~~~~~~nI~~ 43 (244)
T KOG3109|consen 12 GPNYKCLFFDIDDTLYPLS-----TGIQLMMRNNIQE 43 (244)
T ss_pred CccceEEEEecccccccCc-----hhHHHHHHHHHHH
Confidence 4467899999999999943 3455555555543
No 344
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=34.26 E-value=1.2e+02 Score=23.66 Aligned_cols=52 Identities=17% Similarity=0.136 Sum_probs=35.7
Q ss_pred hhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHh
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYD 66 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~ 66 (274)
|..+.....++|.+|+.|.-++ |++.-+.|.+++..+ .++++=|-+..--+.
T Consensus 60 il~~i~~~~~vi~Ld~~Gk~~s----------Se~fA~~l~~~~~~G~~i~f~IGG~~Gl~~~ 112 (155)
T COG1576 60 ILAAIPKGSYVVLLDIRGKALS----------SEEFADFLERLRDDGRDISFLIGGADGLSEA 112 (155)
T ss_pred HHHhcCCCCeEEEEecCCCcCC----------hHHHHHHHHHHHhcCCeEEEEEeCcccCCHH
Confidence 3344455568899999887765 567888888888886 677777766543333
No 345
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=33.93 E-value=1e+02 Score=24.17 Aligned_cols=37 Identities=11% Similarity=0.134 Sum_probs=29.4
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY 50 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~ 50 (274)
....|.+++|=|.|++- |....|-|..++-++++++.
T Consensus 40 ~~~ikavVlDKDNcit~----P~~~~Iwp~~l~~ie~~~~v 76 (190)
T KOG2961|consen 40 RKGIKAVVLDKDNCITA----PYSLAIWPPLLPSIERCKAV 76 (190)
T ss_pred ccCceEEEEcCCCeeeC----CcccccCchhHHHHHHHHHH
Confidence 34678999999999987 34457888888888888776
No 346
>PRK14557 pyrH uridylate kinase; Provisional
Probab=33.51 E-value=1.2e+02 Score=25.67 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=37.5
Q ss_pred hhhhccCCcEEEE-EecCccccCCc-cCCCcCCCCh---------HH----HHHHHHHhhc-CCEEEEcCCCHhhHHhhc
Q 023990 5 ITEASKGKQIVMF-LDYDGTLSPIV-ENPDRAFMSG---------KM----RRAVRQLAKY-FPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 5 ~~~~~~~~~~li~-~DlDGTL~~~~-~~~~~~~i~~---------~~----~~al~~L~~~-~~v~i~TGR~~~~l~~~~ 68 (274)
++...++..-+++ +|.||-..... ..|+...++. .. ..+++...+. ..++|++|+....+..++
T Consensus 148 lA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~~~~~~~~~~A~~~a~~~gi~v~I~ng~~~~~l~~~l 227 (247)
T PRK14557 148 RAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRIC 227 (247)
T ss_pred HHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhcccCHHHHHHHHHHHHHHCCCcEEEEeCCCChHHHHHH
Confidence 3444566666677 49999998532 2222111111 11 2223333444 489999999998888877
Q ss_pred C
Q 023990 69 K 69 (274)
Q Consensus 69 ~ 69 (274)
.
T Consensus 228 ~ 228 (247)
T PRK14557 228 L 228 (247)
T ss_pred c
Confidence 3
No 347
>PRK14556 pyrH uridylate kinase; Provisional
Probab=33.01 E-value=91 Score=26.49 Aligned_cols=63 Identities=11% Similarity=0.043 Sum_probs=39.8
Q ss_pred hhhccCCcEEEEEecCccccCCc-cCCCcCC---CC------hH----HHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 6 TEASKGKQIVMFLDYDGTLSPIV-ENPDRAF---MS------GK----MRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 6 ~~~~~~~~~li~~DlDGTL~~~~-~~~~~~~---i~------~~----~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
+...++..-++++|.||-..... ..|+-.. ++ .. -..+++.+.+.+ .++|+.|+....+.+.+
T Consensus 160 A~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~~l~vmd~~A~~~a~~~gIpi~I~ng~~~~~L~~~l 237 (249)
T PRK14556 160 AVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSKELNVMDLGAFTQCRDFGIPIYVFDLTQPNALVDAV 237 (249)
T ss_pred HHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhcccchHhHHHHHHHHHHHCCCcEEEECCCCchHHHHHH
Confidence 34447777888999999997422 1221111 11 11 134566666664 89999999998888876
No 348
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=32.68 E-value=1.1e+02 Score=30.38 Aligned_cols=63 Identities=19% Similarity=0.282 Sum_probs=37.5
Q ss_pred hhhhccCCcEEEEEecCccccCCccCCCcCC-------------------------CChHHHHHHHHHhhc-CCEEEEcC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVENPDRAF-------------------------MSGKMRRAVRQLAKY-FPTAIVTG 58 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~-------------------------i~~~~~~al~~L~~~-~~v~i~TG 58 (274)
|+...+...-++++|.||-+......|+... +.++. ++...+.+. ..++|++|
T Consensus 176 lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl-~aa~~a~~~gi~v~I~~g 254 (715)
T TIGR01092 176 LALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKV-KAAVWAAYGGTPVIIASG 254 (715)
T ss_pred HHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHH-HHHHHHHHCCCeEEEeCC
Confidence 4455577778899999999975322221111 11222 223333344 37889999
Q ss_pred CCHhhHHhhc
Q 023990 59 RCRDKVYDFV 68 (274)
Q Consensus 59 R~~~~l~~~~ 68 (274)
+....+..++
T Consensus 255 ~~~~~l~~~l 264 (715)
T TIGR01092 255 TAPKNITKVV 264 (715)
T ss_pred CCcchHHHHh
Confidence 8877777766
No 349
>PRK04017 hypothetical protein; Provisional
Probab=32.32 E-value=1.4e+02 Score=22.72 Aligned_cols=45 Identities=9% Similarity=0.124 Sum_probs=28.9
Q ss_pred hHHHHHHHHHhhc---CCEEEEcCCCHhhHHhhcCccCceEeccCcceE
Q 023990 38 GKMRRAVRQLAKY---FPTAIVTGRCRDKVYDFVKLAELYYAGSHGMDI 83 (274)
Q Consensus 38 ~~~~~al~~L~~~---~~v~i~TGR~~~~l~~~~~~~~~~li~~nG~~i 83 (274)
++..+.|.+|++. +.++++-||.-......+++... +|..+|..+
T Consensus 7 ~~~~e~i~~L~e~s~~g~vIVVEGk~D~~~L~~lGv~~~-iI~t~g~~~ 54 (132)
T PRK04017 7 ERFEEIIEELKEFSEAGAPIIVEGKRDVESLRKLGVEGE-IIKVSRTPL 54 (132)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeCccHHHHHHHcCCCcc-EEEECCeec
Confidence 4567788888776 37899999996555555555433 444555444
No 350
>PLN02458 transferase, transferring glycosyl groups
Probab=31.65 E-value=91 Score=27.62 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcCcCCCCCeeEEEEcCCcC--CHHHHHHHHh
Q 023990 185 KGKALEFLLECLGFADCSNVFPVYIGDDTT--DEDAFKILRK 224 (274)
Q Consensus 185 Kg~al~~l~~~~~~~~~~~~~vi~~GDs~N--D~~M~~~~~~ 224 (274)
.-.||++|.++. .+ =|+.|+|+.| |+++|+.+++
T Consensus 190 RN~AL~~IR~h~-l~-----GVVyFADDdNtYsl~LFeEmR~ 225 (346)
T PLN02458 190 RNLALRHIEHHK-LS-----GIVHFAGLSNVYDLDFFDEIRD 225 (346)
T ss_pred HHHHHHHHHhcC-cC-----ceEEEccCCCcccHHHHHHHhc
Confidence 446777776643 32 4899999888 8899999876
No 351
>PRK14024 phosphoribosyl isomerase A; Provisional
Probab=30.98 E-value=1.1e+02 Score=25.68 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=41.9
Q ss_pred hhhhhhhccCCcEEEEEec-CccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHh---------hHHhhcCc
Q 023990 2 FHEITEASKGKQIVMFLDY-DGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRD---------KVYDFVKL 70 (274)
Q Consensus 2 ~~~~~~~~~~~~~li~~Dl-DGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~---------~l~~~~~~ 70 (274)
+.++.+.+.++ -.+-+|+ +|++.... .. .-.....+.++++.+.+ .-+++|+|+.. .+.++...
T Consensus 114 ~~~i~~~~~~~-i~vsld~~~~~v~~~G---w~-~~~~~~~~~~~~l~~~G~~~iiv~~~~~~g~~~G~d~~~i~~i~~~ 188 (241)
T PRK14024 114 CARVIAEHGDR-VAVGLDVRGHTLAARG---WT-RDGGDLWEVLERLDSAGCSRYVVTDVTKDGTLTGPNLELLREVCAR 188 (241)
T ss_pred HHHHHHHhhhh-EEEEEEEeccEeccCC---ee-ecCccHHHHHHHHHhcCCCEEEEEeecCCCCccCCCHHHHHHHHhh
Confidence 34555556433 3345577 34554311 11 12245677888888775 77888888763 33333333
Q ss_pred cCceEeccCcc
Q 023990 71 AELYYAGSHGM 81 (274)
Q Consensus 71 ~~~~li~~nG~ 81 (274)
.+.++++++|.
T Consensus 189 ~~ipviasGGi 199 (241)
T PRK14024 189 TDAPVVASGGV 199 (241)
T ss_pred CCCCEEEeCCC
Confidence 45677777766
No 352
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=30.67 E-value=12 Score=28.19 Aligned_cols=70 Identities=16% Similarity=0.268 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHH-HHHHHhCCCceEEEecCC------C-----CC---ccceEEeCC
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDA-FKILRKREQGFGILVSKF------P-----KK---TSASYSLRE 248 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M-~~~~~~~~~g~~v~v~na------~-----~~---~~A~~~~~~ 248 (274)
.||.-+..+..+..+...+ --|+-|||..--... |.+ ||+.++|.+ + -+ .+|..++..
T Consensus 59 ~k~a~iNaiRT~~li~~aD-vvVvrFGekYKQWNaAfDA------g~aaAlgKplI~lh~~~~~HpLKEvdaaA~avaet 131 (144)
T TIGR03646 59 DAAASINNIRTRKLIEKAD-VVIALFGEKYKQWNAAFDA------GYAAALGKPLIILRPEELIHPLKEVDNKAQAVVET 131 (144)
T ss_pred ccccchhhHHHHHHHhhCC-EEEEEechHHHHHHHHhhH------HHHHHcCCCeEEecchhccccHHHHhHHHHHHhcC
Confidence 3444444454455554331 257889997632221 221 555555543 1 11 356667788
Q ss_pred HHHHHHHHHHHH
Q 023990 249 PDEVMDFLQKLV 260 (274)
Q Consensus 249 ~~~v~~~L~~l~ 260 (274)
++.|.+.|...+
T Consensus 132 p~Qvv~iL~Yv~ 143 (144)
T TIGR03646 132 PEQAIETLKYIL 143 (144)
T ss_pred HHHHHHHHHHhh
Confidence 898888887654
No 353
>PRK14588 tRNA pseudouridine synthase ACD; Provisional
Probab=30.37 E-value=80 Score=27.16 Aligned_cols=55 Identities=24% Similarity=0.267 Sum_probs=38.8
Q ss_pred EEEEEecCccccC-CccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 14 IVMFLDYDGTLSP-IVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 14 ~li~~DlDGTL~~-~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
..+.+=+|||=+. +..+++..++..+..++|.++.....-++.+||.-..+-.+.
T Consensus 4 ~~l~iaYdGt~f~G~Q~Q~~~~TVq~~Le~aL~~l~~~~i~i~~AgRTDaGVHA~g 59 (272)
T PRK14588 4 IALLLEYDGTDFAGSQWQTDGRTVQGALEAAWQALTQERRRIVLAGRTDAGVHARG 59 (272)
T ss_pred EEEEEEEcCCceeeeEECCCCCCHHHHHHHHHHHhhCCCceEEEecCCCcCcCccc
Confidence 4567789999774 333344457888889999988765444678999887766543
No 354
>PRK14114 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=29.84 E-value=1.6e+02 Score=24.78 Aligned_cols=55 Identities=16% Similarity=0.220 Sum_probs=36.2
Q ss_pred hhhhc--cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcC-CCHhhHHhhcC
Q 023990 5 ITEAS--KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTG-RCRDKVYDFVK 69 (274)
Q Consensus 5 ~~~~~--~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TG-R~~~~l~~~~~ 69 (274)
+++.| ..-..|.+.||||++... +.+.+.|+++.+.. .+.+--| |+.+.++.++.
T Consensus 35 ~A~~~~~~ga~~lhivDLd~a~~g~----------~~n~~~i~~i~~~~~~v~vGGGIrs~e~~~~~l~ 93 (241)
T PRK14114 35 LVEKLIEEGFTLIHVVDLSKAIENS----------VENLPVLEKLSEFAEHIQIGGGIRSLDYAEKLRK 93 (241)
T ss_pred HHHHHHHCCCCEEEEEECCCcccCC----------cchHHHHHHHHhhcCcEEEecCCCCHHHHHHHHH
Confidence 34445 445789999999998652 23677788887764 4544444 55667777663
No 355
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=28.68 E-value=1.1e+02 Score=25.50 Aligned_cols=64 Identities=13% Similarity=0.017 Sum_probs=37.5
Q ss_pred hhhhccCCcEEEEEe-cCccccCCcc-CCCcCC---CCh--------H--HHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 5 ITEASKGKQIVMFLD-YDGTLSPIVE-NPDRAF---MSG--------K--MRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 5 ~~~~~~~~~~li~~D-lDGTL~~~~~-~~~~~~---i~~--------~--~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
+++..++..-++++| .||-...... .|+... ++. . -..+++.+++.+ .++|++|+....+...+
T Consensus 144 lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~~~~~~d~~~~~~a~~~~i~v~i~~g~~~~~l~~~l 223 (233)
T TIGR02075 144 RAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKKNLKVMDLTAFALARDNNLPIVVFNIDEPGALKKVI 223 (233)
T ss_pred HHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhcCHHHHHHHHHHHHHHCCCeEEEEeCCCcchHHHHH
Confidence 455567777788999 9999975321 121111 110 0 122333334433 78888998888887766
No 356
>PRK10671 copA copper exporting ATPase; Provisional
Probab=28.61 E-value=1e+02 Score=31.05 Aligned_cols=57 Identities=16% Similarity=0.167 Sum_probs=41.7
Q ss_pred cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 10 KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 10 ~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
....+.+++-.||+++..-. -...+-+.+.++|++|++.+ .++++||.+....+.+.
T Consensus 627 ~~g~~~v~va~~~~~~g~~~--l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia 684 (834)
T PRK10671 627 SQGATPVLLAVDGKAAALLA--IRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA 684 (834)
T ss_pred hCCCeEEEEEECCEEEEEEE--ccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 34456777778898763211 12356788999999999885 89999999998776654
No 357
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated
Probab=28.57 E-value=90 Score=25.71 Aligned_cols=55 Identities=18% Similarity=0.266 Sum_probs=33.8
Q ss_pred hhhhhc--cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC--CEEEEcC-CCHhhHHhhc
Q 023990 4 EITEAS--KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTG-RCRDKVYDFV 68 (274)
Q Consensus 4 ~~~~~~--~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~--~v~i~TG-R~~~~l~~~~ 68 (274)
++++.| ..-..+.++|+||++-.. +.+.+.++++.+.. ++.+.-| |+.+.++.++
T Consensus 34 ~~a~~~~~~g~~~i~v~dld~~~~g~----------~~~~~~i~~i~~~~~~pv~~~GGI~~~ed~~~~~ 93 (233)
T PRK00748 34 AQAKAWEDQGAKWLHLVDLDGAKAGK----------PVNLELIEAIVKAVDIPVQVGGGIRSLETVEALL 93 (233)
T ss_pred HHHHHHHHcCCCEEEEEeCCccccCC----------cccHHHHHHHHHHCCCCEEEcCCcCCHHHHHHHH
Confidence 345566 445789999999998551 23567777777763 4444333 4445566554
No 358
>COG0101 TruA Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]
Probab=28.51 E-value=1e+02 Score=26.50 Aligned_cols=55 Identities=22% Similarity=0.335 Sum_probs=38.9
Q ss_pred cEEEEEecCccccC-CccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhh
Q 023990 13 QIVMFLDYDGTLSP-IVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDF 67 (274)
Q Consensus 13 ~~li~~DlDGTL~~-~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~ 67 (274)
+..+-+=+|||-+. +..+|+..++-.+..++|.++.....-+.++||.-..+-..
T Consensus 3 ri~l~iaYdGt~f~G~Q~Qp~~~TVQ~~le~aL~~i~~~~~~i~~AGRTD~GVHA~ 58 (266)
T COG0101 3 RIALKIAYDGTRFHGWQRQPNVRTVQGELEKALSKIGGESVRVIGAGRTDAGVHAL 58 (266)
T ss_pred eEEEEEEEcCCceeeeccCCCCCCHHHHHHHHHHHhcCCcceeEEecCCCcCcccc
Confidence 45677889999775 34444455677777888877776655688999987766544
No 359
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=28.35 E-value=78 Score=26.23 Aligned_cols=35 Identities=6% Similarity=-0.054 Sum_probs=28.1
Q ss_pred CCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 34 AFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 34 ~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
..+-+.+.++|++|++++ .++|+|..+......++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~ 129 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF 129 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 356788999999999986 89999999877655554
No 360
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=28.23 E-value=93 Score=26.88 Aligned_cols=37 Identities=8% Similarity=0.167 Sum_probs=31.2
Q ss_pred cCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC
Q 023990 33 RAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 33 ~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~ 69 (274)
+..+.|.+.+.+..|++++ .++|+||-....++..+.
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~ 156 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLR 156 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHH
Confidence 3567889999999999885 899999999888887764
No 361
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. Examples of this enzyme in Actinobacteria have been found to be bifunctional, also possessing phosphoribosylanthranilate isomerase activity ; the trusted cutoff here has now been raised to 275.0 to exclude the bifunctional group, now represented by model TIGR01919. HisA from Lactococcus lactis was reported to be inactive (MEDLINE:93322317).
Probab=28.23 E-value=1.5e+02 Score=24.42 Aligned_cols=56 Identities=16% Similarity=0.241 Sum_probs=36.2
Q ss_pred hhhhhc--cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc-C-CEEEEcC-CCHhhHHhhcC
Q 023990 4 EITEAS--KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY-F-PTAIVTG-RCRDKVYDFVK 69 (274)
Q Consensus 4 ~~~~~~--~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~-~-~v~i~TG-R~~~~l~~~~~ 69 (274)
++++.| ..-..+.+.|+|+++.... .+.+.++++.+. . .+.+--| |+.+.++.++.
T Consensus 32 ~~a~~~~~~g~~~l~v~dl~~~~~g~~----------~~~~~i~~i~~~~~~pi~~ggGI~~~ed~~~~~~ 92 (230)
T TIGR00007 32 EAAKKWEEEGAERIHVVDLDGAKEGGP----------VNLPVIKKIVRETGVPVQVGGGIRSLEDVEKLLD 92 (230)
T ss_pred HHHHHHHHcCCCEEEEEeCCccccCCC----------CcHHHHHHHHHhcCCCEEEeCCcCCHHHHHHHHH
Confidence 455666 3346899999999996521 245566666665 3 5666555 67777777664
No 362
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=28.14 E-value=2e+02 Score=24.15 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=15.7
Q ss_pred hhhhccCCcEEEEEecCccccC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~ 26 (274)
++.+..+. .++++|.||.+..
T Consensus 164 lA~~l~A~-~i~ltdv~Gv~~~ 184 (252)
T cd04249 164 IAQLLNAD-LVLLSDVSGVLDA 184 (252)
T ss_pred HHHHcCCC-EEEEeCCcccCCC
Confidence 45556665 6899999999864
No 363
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=28.06 E-value=67 Score=28.02 Aligned_cols=41 Identities=27% Similarity=0.361 Sum_probs=28.9
Q ss_pred HHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHHHhCCCce-EEEec
Q 023990 187 KALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKILRKREQGF-GILVS 234 (274)
Q Consensus 187 ~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~~~~~~g~-~v~v~ 234 (274)
.....|++.+++.++ +++++||..|==-||... .|+ ++.|-
T Consensus 228 ~m~~~l~~~~~i~ps---Rt~mvGDRL~TDIlFG~~----~G~~TLLvl 269 (306)
T KOG2882|consen 228 FMFEYLLEKFNIDPS---RTCMVGDRLDTDILFGKN----CGFKTLLVL 269 (306)
T ss_pred HHHHHHHHHcCCCcc---eEEEEcccchhhhhHhhc----cCcceEEEe
Confidence 345677788899886 899999998755557654 366 44443
No 364
>PF12611 DUF3766: Protein of unknown function (DUF3766); InterPro: IPR013367 Proteins in this entry are encoded in a subset of bacterial flagellar operons, generally between genes designated flgD and flgE, in species as diverse as Bacillus halodurans and various other Firmicutes, Geobacter sulfurreducens, and Bdellovibrio bacteriovorus. The specific molecular function of this protein is unknown.
Probab=27.85 E-value=31 Score=17.83 Aligned_cols=12 Identities=17% Similarity=0.268 Sum_probs=9.2
Q ss_pred EEEEEecCcccc
Q 023990 14 IVMFLDYDGTLS 25 (274)
Q Consensus 14 ~li~~DlDGTL~ 25 (274)
-=+|+.+||+.+
T Consensus 13 ~nvFTNIDsaVi 24 (24)
T PF12611_consen 13 ENVFTNIDSAVI 24 (24)
T ss_pred cCceeccccccC
Confidence 348999999863
No 365
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=27.78 E-value=63 Score=26.62 Aligned_cols=14 Identities=36% Similarity=0.508 Sum_probs=13.0
Q ss_pred cEEEEEecCccccC
Q 023990 13 QIVMFLDYDGTLSP 26 (274)
Q Consensus 13 ~~li~~DlDGTL~~ 26 (274)
.+.++||+||||++
T Consensus 2 ~~avIFD~DGvLvD 15 (221)
T COG0637 2 IKAVIFDMDGTLVD 15 (221)
T ss_pred CcEEEEcCCCCcCc
Confidence 57899999999999
No 366
>PRK14586 tRNA pseudouridine synthase ACD; Provisional
Probab=27.74 E-value=91 Score=26.32 Aligned_cols=55 Identities=20% Similarity=0.203 Sum_probs=38.9
Q ss_pred EEEEEecCccccC-CccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 14 IVMFLDYDGTLSP-IVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 14 ~li~~DlDGTL~~-~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
..+.+=+|||=+. +..+|+..++..+..++|.++.....-++.+||.-..+-..-
T Consensus 4 ~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~~ 59 (245)
T PRK14586 4 VAAVVSYDGSNFFGYQGQPDVRTVQGVFEDALERIFKQRIYTQAAGRTDTGVHANG 59 (245)
T ss_pred EEEEEEEcCCceeeEEECCCCCCHHHHHHHHHHHHhCCCeeEEEecCCccCCCccC
Confidence 4577889999664 343444457888889999988755445678999877765543
No 367
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=27.69 E-value=1.9e+02 Score=23.74 Aligned_cols=22 Identities=18% Similarity=0.255 Sum_probs=17.3
Q ss_pred hhhhccCCcEEEEEecCccccC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~ 26 (274)
++...+...-++++|.||-+..
T Consensus 124 lA~~l~a~~li~~tdVdGVy~~ 145 (221)
T cd04253 124 LAERLGADLLINATNVDGVYSK 145 (221)
T ss_pred HHHHcCCCEEEEEeCCCeeECC
Confidence 4555677778889999999975
No 368
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=27.46 E-value=1.6e+02 Score=24.66 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=17.4
Q ss_pred hhhhccCCcEEEEEecCccccC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~ 26 (274)
++....+.+-++++|.||-+..
T Consensus 156 lA~~l~A~~li~ltdv~Gv~~~ 177 (252)
T cd04241 156 LAKALKPERVIFLTDVDGVYDK 177 (252)
T ss_pred HHHHcCCCEEEEEeCCCeeECC
Confidence 4555577788899999999975
No 369
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=27.33 E-value=1.3e+02 Score=25.08 Aligned_cols=59 Identities=14% Similarity=0.255 Sum_probs=45.5
Q ss_pred hhhhccCCcEEEEEe-cCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC
Q 023990 5 ITEASKGKQIVMFLD-YDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 5 ~~~~~~~~~~li~~D-lDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~ 69 (274)
+...-+..-.++=+| +||.+++ +-++-+...++|++..+.+ .+=+..-++...++.+..
T Consensus 22 l~~~~~agad~iH~DVMDghFVP------NiTfGp~~v~~l~~~t~~p~DvHLMV~~p~~~i~~fa~ 82 (220)
T COG0036 22 LKALEAAGADLIHIDVMDGHFVP------NITFGPPVVKALRKITDLPLDVHLMVENPDRYIEAFAK 82 (220)
T ss_pred HHHHHHcCCCEEEEeccCCCcCC------CcccCHHHHHHHhhcCCCceEEEEecCCHHHHHHHHHH
Confidence 333446777889999 5999999 5578899999999976664 677888888877877763
No 370
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=26.94 E-value=1.3e+02 Score=24.92 Aligned_cols=64 Identities=13% Similarity=0.054 Sum_probs=37.9
Q ss_pred hhhhccCCcEEEEEecCccccCCc-cCCCcCC---CChH----------HHHHHHHHhhcC-CEEEEcCCCHhhHHhhc
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIV-ENPDRAF---MSGK----------MRRAVRQLAKYF-PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~-~~~~~~~---i~~~----------~~~al~~L~~~~-~v~i~TGR~~~~l~~~~ 68 (274)
++...+...-++++|.||-+.... ..|+... ++.+ -..+++.+++.+ .++|++|+....+..++
T Consensus 143 lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~~~~~~~d~~a~~~a~~~gi~~~I~~g~~~~~l~~~l 221 (231)
T cd04254 143 RAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLSKGLKVMDATAFTLCRDNNLPIVVFNINEPGNLLKAV 221 (231)
T ss_pred HHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHhcchhhhHHHHHHHHHHCCCeEEEEeCCCccHHHHHH
Confidence 455567777778999999997432 1122111 2210 112233334443 78889999888888776
No 371
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=26.81 E-value=2.3e+02 Score=28.22 Aligned_cols=63 Identities=17% Similarity=0.358 Sum_probs=36.6
Q ss_pred hhhhccCCcEEEEEecCccccCCccCCCcCCC-------------------------ChHHHHHHHHHhhc-CCEEEEcC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVENPDRAFM-------------------------SGKMRRAVRQLAKY-FPTAIVTG 58 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i-------------------------~~~~~~al~~L~~~-~~v~i~TG 58 (274)
+....+...-++++|.||-+......++...+ .++. ++...+.+. ..++|+.|
T Consensus 184 lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGGM~~Kl-~Aa~~a~~~Gi~v~I~~g 262 (718)
T PLN02418 184 LALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGGMTAKV-KAAVNAASAGIPVVITSG 262 (718)
T ss_pred HHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcccccccCCCCcHHHH-HHHHHHHHCCCcEEEeCC
Confidence 34445677788999999999763221211111 1111 223333344 37889999
Q ss_pred CCHhhHHhhc
Q 023990 59 RCRDKVYDFV 68 (274)
Q Consensus 59 R~~~~l~~~~ 68 (274)
|....+..++
T Consensus 263 ~~~~~l~~~l 272 (718)
T PLN02418 263 YALDNIRKVL 272 (718)
T ss_pred CCcchHHHHh
Confidence 9877777766
No 372
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=26.70 E-value=1.7e+02 Score=24.89 Aligned_cols=23 Identities=30% Similarity=0.421 Sum_probs=18.1
Q ss_pred hhhhhccCCcEEEEEecCccccC
Q 023990 4 EITEASKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 4 ~~~~~~~~~~~li~~DlDGTL~~ 26 (274)
.++....+.+-++++|.||-+..
T Consensus 176 ~lA~~l~A~~li~ltdv~Gv~~~ 198 (268)
T PRK14058 176 AIAGALKAEALVLLSDVPGLLRD 198 (268)
T ss_pred HHHHHcCCCEEEEEeCChhhccC
Confidence 34556677788899999999975
No 373
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=26.67 E-value=1.6e+02 Score=24.97 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=16.6
Q ss_pred hhhhccCCcEEEEEecCccccC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~ 26 (274)
++....+.+-++++|.||-+.+
T Consensus 173 lA~~L~A~~li~~tdv~Gv~~~ 194 (257)
T cd04251 173 IAAALKAERLILLTDVEGLYLD 194 (257)
T ss_pred HHHHcCCCEEEEEeCChhheeC
Confidence 4455577788899999998854
No 374
>PF11549 Sec31: Protein transport protein SEC31; InterPro: IPR021614 Sec31 is involved in COPII coat formation as it forms through the sequential binding of three cytoplasmic proteins: Sar1, Sec23/24 and Sec13/31. Sec13/31 is recruited by the pre-budding complex and polymerisation of Sec13/31 occurs to form an octahedral cage that is the outer shell of the COPII coat []. Sec13/31 is a hetero-tetramer which is organised as a linear array of alpha-solenoid and beta-propeller domains to form a rod in which twenty-four copies assemble to form the COPII cub-octahedron []. ; PDB: 2QTV_D.
Probab=26.17 E-value=23 Score=21.74 Aligned_cols=11 Identities=18% Similarity=-0.082 Sum_probs=3.9
Q ss_pred cCCcCCHHHHH
Q 023990 210 GDDTTDEDAFK 220 (274)
Q Consensus 210 GDs~ND~~M~~ 220 (274)
-|++||++|--
T Consensus 23 NdGWNDLpl~v 33 (51)
T PF11549_consen 23 NDGWNDLPLKV 33 (51)
T ss_dssp HS-TT---S--
T ss_pred cCcccccchhh
Confidence 48899999743
No 375
>PLN02811 hydrolase
Probab=26.03 E-value=99 Score=25.20 Aligned_cols=31 Identities=29% Similarity=0.255 Sum_probs=25.5
Q ss_pred CCChHHHHHHHHHhhcC-CEEEEcCCCHhhHH
Q 023990 35 FMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVY 65 (274)
Q Consensus 35 ~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~ 65 (274)
.+-+.+.+.|+.|++++ .++|+||.+...+.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~ 109 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFD 109 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHH
Confidence 45688999999999885 89999998876443
No 376
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=25.55 E-value=1e+02 Score=27.56 Aligned_cols=49 Identities=20% Similarity=0.209 Sum_probs=35.5
Q ss_pred CccccCC-ccCCCc-CCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC
Q 023990 21 DGTLSPI-VENPDR-AFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 21 DGTL~~~-~~~~~~-~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~ 69 (274)
||+|-.. ..+|++ ....|.+.++|++|++.+ .++|+|+.+......++.
T Consensus 168 ~g~lk~~v~~dp~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~ 219 (343)
T TIGR02244 168 KGSLKKKVMENPEKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMK 219 (343)
T ss_pred cchHHHHHHHCHHHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 5666641 122222 234789999999999996 899999999988887664
No 377
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=25.30 E-value=1e+02 Score=22.32 Aligned_cols=34 Identities=12% Similarity=-0.022 Sum_probs=27.7
Q ss_pred CChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhhcC
Q 023990 36 MSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDFVK 69 (274)
Q Consensus 36 i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~~~ 69 (274)
-++++.++++.+++++ +++.+|+.+...+.+...
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s~la~~ad 92 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGSTLAREAD 92 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCChHHHhCC
Confidence 3678999999999995 899999998877776653
No 378
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=25.29 E-value=1.1e+02 Score=23.98 Aligned_cols=49 Identities=14% Similarity=0.177 Sum_probs=32.1
Q ss_pred hhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC--CEEEEcCCCHhh
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCRDK 63 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~--~v~i~TGR~~~~ 63 (274)
|.+.......+|++|..|-.++ |++.-+.|.++...+ .++++-|-+...
T Consensus 60 il~~i~~~~~~i~Ld~~Gk~~s----------S~~fA~~l~~~~~~g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 60 ILKKIPPNDYVILLDERGKQLS----------SEEFAKKLERWMNQGKSDIVFIIGGADGL 110 (155)
T ss_dssp HHCTSHTTSEEEEE-TTSEE------------HHHHHHHHHHHHHTTS-EEEEEE-BTTB-
T ss_pred HHhhccCCCEEEEEcCCCccCC----------hHHHHHHHHHHHhcCCceEEEEEecCCCC
Confidence 4444556777889999888776 567888888888774 678777776643
No 379
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=25.12 E-value=2.4e+02 Score=24.03 Aligned_cols=22 Identities=18% Similarity=0.416 Sum_probs=17.0
Q ss_pred hhhhccCCcEEEEEecCccccC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~ 26 (274)
++...+...-++++|.||-+..
T Consensus 170 lA~~l~ad~li~~TdVdGVy~~ 191 (262)
T cd04255 170 LAEVIGARNLIFVKDEDGLYTA 191 (262)
T ss_pred HHHHhCCCEEEEEeccCeeECC
Confidence 4455577778889999999974
No 380
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=24.73 E-value=1.8e+02 Score=20.09 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=22.5
Q ss_pred EEEeCC--CCCCHHHHHHHHHHHcCcCCCCCeeEEEEc
Q 023990 175 MEIRPK--IEWDKGKALEFLLECLGFADCSNVFPVYIG 210 (274)
Q Consensus 175 iei~p~--~~~sKg~al~~l~~~~~~~~~~~~~vi~~G 210 (274)
++|.+. ...||...-..|++.++.+.+ .++.+|
T Consensus 3 ~~v~h~g~~Tpsr~ei~~klA~~~~~~~~---~ivv~~ 37 (84)
T PF01282_consen 3 FEVLHPGKPTPSRKEIREKLAAMLNVDPD---LIVVFG 37 (84)
T ss_dssp EEEE-SSSSS--HHHHHHHHHHHHTSTGC---CEEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHhCCCCC---eEEEec
Confidence 556655 137999999999999999765 566655
No 381
>TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family. This subfamily of the adenylate kinase superfamily contains examples of UMP-CMP kinase, as well as others proteins with unknown specificity, some currently designated adenylate kinase. All known members are eukaryotic.
Probab=24.45 E-value=86 Score=24.54 Aligned_cols=29 Identities=24% Similarity=0.328 Sum_probs=23.3
Q ss_pred EeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCC
Q 023990 177 IRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDD 212 (274)
Q Consensus 177 i~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs 212 (274)
+=|+ |..|++-.+.|++.+|+. .+..||-
T Consensus 5 ~G~p-GsGKst~a~~la~~~~~~------~is~~d~ 33 (183)
T TIGR01359 5 LGGP-GSGKGTQCAKIVENFGFT------HLSAGDL 33 (183)
T ss_pred ECCC-CCCHHHHHHHHHHHcCCe------EEECChH
Confidence 3478 999999999999999863 6777654
No 382
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=24.41 E-value=91 Score=22.34 Aligned_cols=27 Identities=30% Similarity=0.364 Sum_probs=22.2
Q ss_pred eCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcC
Q 023990 178 RPKIEWDKGKALEFLLECLGFADCSNVFPVYIGD 211 (274)
Q Consensus 178 ~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GD 211 (274)
=|+ |+.|.+..+.|++.+|+. ++..+|
T Consensus 6 G~~-gsGKST~a~~La~~~~~~------~i~~d~ 32 (121)
T PF13207_consen 6 GPP-GSGKSTLAKELAERLGFP------VISMDD 32 (121)
T ss_dssp EST-TSSHHHHHHHHHHHHTCE------EEEEHH
T ss_pred CCC-CCCHHHHHHHHHHHHCCe------EEEecc
Confidence 377 999999999999999863 566666
No 383
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=24.20 E-value=2.6e+02 Score=22.90 Aligned_cols=22 Identities=23% Similarity=0.333 Sum_probs=16.9
Q ss_pred hhhhccCCcEEEEEecCccccC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~ 26 (274)
++...++..-++++|.||-+..
T Consensus 124 lA~~l~A~~li~ltdVdGvy~~ 145 (221)
T TIGR02076 124 LAEFSKADLLINATNVDGVYDK 145 (221)
T ss_pred HHHHcCCCEEEEEeCCCcccCC
Confidence 4455577777889999999975
No 384
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=24.07 E-value=55 Score=25.59 Aligned_cols=16 Identities=25% Similarity=0.555 Sum_probs=13.8
Q ss_pred CCcEEEEEecCccccC
Q 023990 11 GKQIVMFLDYDGTLSP 26 (274)
Q Consensus 11 ~~~~li~~DlDGTL~~ 26 (274)
.++|++++||||.+--
T Consensus 96 ~~~r~~VldF~Gdi~A 111 (155)
T PF08496_consen 96 PKPRLFVLDFKGDIKA 111 (155)
T ss_pred CCCeEEEEecCCCccH
Confidence 5799999999999844
No 385
>PF00406 ADK: Adenylate kinase; InterPro: IPR000850 Adenylate kinases (ADK) are phosphotransferases that catalyse the reversible reaction AMP + MgATP = ADP + MgADP an essential reaction for many processes in living cells. Two ADK isozymes have been identified in mammalian cells. These specifically bind AMP and favour binding to ATP over other nucleotide triphosphates (AK1 is cytosolic and AK2 is located in the mitochondria). A third ADK has been identified in bovine heart and human cells [], this is a mitochondrial GTP:AMP phosphotransferase, also specific for the phosphorylation of AMP, but can only use GTP or ITP as a substrate []. ADK has also been identified in different bacterial species and in yeast []. Two further enzymes are known to be related to the ADK family, i.e. yeast uridine monophosphokinase and slime mold UMP-CMP kinase. Within the ADK family there are several conserved regions, including the ATP-binding domains. One of the most conserved areas includes an Arg residue, whose modification inactivates the enzyme, together with an Asp that resides in the catalytic cleft of the enzyme and participates in a salt bridge.; GO: 0005524 ATP binding, 0019205 nucleobase-containing compound kinase activity, 0006139 nucleobase-containing compound metabolic process; PDB: 1ZD8_A 3TLX_D 1TEV_A 1ZAK_B 3CM0_A 3ADK_A 1ZIP_A 1ZIO_A 1ZIN_A 3NDP_A ....
Probab=24.00 E-value=65 Score=24.48 Aligned_cols=28 Identities=25% Similarity=0.352 Sum_probs=23.8
Q ss_pred eCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCC
Q 023990 178 RPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDD 212 (274)
Q Consensus 178 ~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs 212 (274)
=|+ |..|++-.+.|++.+|+ ..+++||=
T Consensus 3 G~P-gsGK~t~~~~la~~~~~------~~is~~~l 30 (151)
T PF00406_consen 3 GPP-GSGKGTQAKRLAKRYGL------VHISVGDL 30 (151)
T ss_dssp EST-TSSHHHHHHHHHHHHTS------EEEEHHHH
T ss_pred CCC-CCChHHHHHHHHHhcCc------ceechHHH
Confidence 478 99999999999999987 36888873
No 386
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=23.94 E-value=50 Score=27.33 Aligned_cols=43 Identities=35% Similarity=0.379 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHH-HHHHHHhCCCce-EEEecC
Q 023990 184 DKGKALEFLLECLGFADCSNVFPVYIGDDTTDED-AFKILRKREQGF-GILVSK 235 (274)
Q Consensus 184 sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~-M~~~~~~~~~g~-~v~v~n 235 (274)
||-.= +..++-+|.+++ +++.+||+.||-- --+.+ |. +|.|.-
T Consensus 183 ~~~fF-e~al~~~gv~p~---~aVMIGDD~~dDvgGAq~~-----GMrgilVkT 227 (262)
T KOG3040|consen 183 SPFFF-ESALQALGVDPE---EAVMIGDDLNDDVGGAQAC-----GMRGILVKT 227 (262)
T ss_pred CHHHH-HHHHHhcCCChH---HheEEccccccchhhHhhh-----cceeEEeec
Confidence 55442 333445677776 7999999999743 22222 43 666654
No 387
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=23.54 E-value=1.3e+02 Score=26.50 Aligned_cols=34 Identities=15% Similarity=-0.009 Sum_probs=25.5
Q ss_pred CCCChHHHHHHHHHhhcC-CEEEEcCCCHhhHHhh
Q 023990 34 AFMSGKMRRAVRQLAKYF-PTAIVTGRCRDKVYDF 67 (274)
Q Consensus 34 ~~i~~~~~~al~~L~~~~-~v~i~TGR~~~~l~~~ 67 (274)
..+.|.+.+.|+.|++.+ +++|+||........+
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l 214 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYL 214 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHH
Confidence 345677788899999885 8999999886544443
No 388
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=23.30 E-value=1.2e+02 Score=27.04 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=50.2
Q ss_pred hccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEc-C-----CCHhhHHhh-cCc--------cC
Q 023990 8 ASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVT-G-----RCRDKVYDF-VKL--------AE 72 (274)
Q Consensus 8 ~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~T-G-----R~~~~l~~~-~~~--------~~ 72 (274)
..+++.-||+=|+||.=.+-.++|-...+.+.-..|...|. .+|++.| | |..+.+.+. ++- ..
T Consensus 3 l~~~~nlLiVQDLDGVCmpLVkDPltR~ld~~Yv~A~~~l~--~~F~VLTnGEHeG~RGVNriVE~al~~~~~~~~~GLY 80 (389)
T TIGR02399 3 IINTENLLIVQDLDGVCIPLVKDPLTRKLDSKYVFAVKNLE--KEFYVLTNGEHEGPRGVNRIVERSLGDIDQPKEKGLY 80 (389)
T ss_pred ccCCCCeEEEecCCccchhhccCcccccCCHHHHHHHHHhc--CcEEEEeCCcccCccchHHHHHHHcCCccchhhhccc
Confidence 34778899999999997776666656677887777777665 3565555 3 344444332 321 12
Q ss_pred ceEeccCcceEeCCCCC
Q 023990 73 LYYAGSHGMDIKGPTKG 89 (274)
Q Consensus 73 ~~li~~nG~~i~~~~~~ 89 (274)
++=.+-+|..+.+..|.
T Consensus 81 LPGLAAgGVq~QDr~G~ 97 (389)
T TIGR02399 81 LPGLAAGGVQYQDNNGN 97 (389)
T ss_pred cccccccceeeeccCCc
Confidence 22346677777766655
No 389
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=23.07 E-value=92 Score=25.06 Aligned_cols=34 Identities=21% Similarity=0.038 Sum_probs=25.1
Q ss_pred HHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 186 GKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 186 g~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.--+..+++.+++++. ..+.+||...|+..=..+
T Consensus 108 ~gm~~~~~~~~~iD~~---~s~~VGD~~~Dlq~a~n~ 141 (181)
T COG0241 108 PGMLLSALKEYNIDLS---RSYVVGDRLTDLQAAENA 141 (181)
T ss_pred hHHHHHHHHHhCCCcc---ceEEecCcHHHHHHHHHC
Confidence 3345666677778876 799999999997755554
No 390
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=23.05 E-value=74 Score=26.96 Aligned_cols=38 Identities=11% Similarity=0.036 Sum_probs=22.5
Q ss_pred CCHHHHHHHHHHHc-CcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 183 WDKGKALEFLLECL-GFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 183 ~sKg~al~~l~~~~-~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
.||..++..=...+ .+... .+++.+|||..|+.|-.-+
T Consensus 160 ~NKn~~~l~~~~~~~~~~~R--~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 160 FNKNESALEDSPYFKQLKKR--TNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp T-HHHHHHTTHHHHHCTTT----EEEEEESSSGGGGTTTT-
T ss_pred eeCCcccccCchHHHHhccC--CcEEEecCccCChHhhcCC
Confidence 47877655322222 23222 3899999999999996555
No 391
>KOG2826 consensus Actin-related protein Arp2/3 complex, subunit ARPC2 [Cytoskeleton]
Probab=22.73 E-value=65 Score=26.99 Aligned_cols=18 Identities=33% Similarity=0.410 Sum_probs=14.2
Q ss_pred CcEEEEEecCccccCCcc
Q 023990 12 KQIVMFLDYDGTLSPIVE 29 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~ 29 (274)
..-.++.|+||||+..+.
T Consensus 30 sid~~vaDFDgv~yhiSn 47 (301)
T KOG2826|consen 30 SIDVTVADFDGVLYHISN 47 (301)
T ss_pred ceeEEEeccCceEEEccC
Confidence 346799999999997553
No 392
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=22.59 E-value=3.1e+02 Score=21.78 Aligned_cols=59 Identities=20% Similarity=0.112 Sum_probs=32.7
Q ss_pred eeEEEEcCCcCCHHHHHHHHhC---CCceEEEecCCCC----CccceEEeC-CHHHHHHHHHHHHhhhc
Q 023990 204 VFPVYIGDDTTDEDAFKILRKR---EQGFGILVSKFPK----KTSASYSLR-EPDEVMDFLQKLVRWKR 264 (274)
Q Consensus 204 ~~vi~~GDs~ND~~M~~~~~~~---~~g~~v~v~na~~----~~~A~~~~~-~~~~v~~~L~~l~~~~~ 264 (274)
++++++|++ |.+|..++++. +.|+.++-..... -..|-...+ +.++|++.++++-+.++
T Consensus 66 hniiviG~~--~~dm~~A~n~l~~~gGG~vvv~~g~v~a~lpLpi~GlmS~~~~eev~~~~~~l~~~~~ 132 (171)
T PF13382_consen 66 HNIIVIGTN--DEDMALAANRLIEMGGGIVVVDDGEVLAELPLPIAGLMSDLPAEEVARQLEELEEALR 132 (171)
T ss_dssp --EEEEESS--HHHHHHHHHHHHHTTSEEEEEETTEEEEEEE-TBTTTBBSS-HHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC--HHHHHHHHHHHHHhCCCEEEEECCEEEEEEeccccceecCCCHHHHHHHHHHHHHHHH
Confidence 379999985 56677776652 3345544332100 022333333 56889988888877554
No 393
>PRK09411 carbamate kinase; Reviewed
Probab=22.31 E-value=1.3e+02 Score=26.21 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=33.3
Q ss_pred hhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhh
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDF 67 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~ 67 (274)
++....+.+-+|++|.||.+.++. .|+...++.-+.+.++++.. +||.....++..
T Consensus 209 LA~~L~Ad~LIiLTDVdGV~~n~~-~p~~~~I~~it~~e~~~~~~------~~GgM~pKVeAA 264 (297)
T PRK09411 209 LAEQINADGLVILTDADAVYENWG-TPQQRAIRHATPDELAPFAK------ADGAMGPKVTAV 264 (297)
T ss_pred HHHHhCCCEEEEEeCchhhccCCC-CCCCcCCCCcCHHHHHHhcc------CCCCcHHHHHHH
Confidence 455557778899999999998753 23323343333333333322 478876666543
No 394
>TIGR02129 hisA_euk phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type. This enzyme acts in the biosynthesis of histidine and has been characterized in S. cerevisiae and Arabidopsis where it complements the E. coli HisA gene. In eukaryotes the gene is known as HIS6. In bacteria, this gene is found in Fibrobacter succinogenes, presumably due to lateral gene transfer from plants in the rumen gut.
Probab=21.98 E-value=2.9e+02 Score=23.51 Aligned_cols=77 Identities=13% Similarity=0.185 Sum_probs=42.8
Q ss_pred hhhhhhhccCCcEEEEEec----Cc--cccCCccCCCcCCCChHHH-HHHHHHhhcCCEEEEcCCC---------HhhHH
Q 023990 2 FHEITEASKGKQIVMFLDY----DG--TLSPIVENPDRAFMSGKMR-RAVRQLAKYFPTAIVTGRC---------RDKVY 65 (274)
Q Consensus 2 ~~~~~~~~~~~~~li~~Dl----DG--TL~~~~~~~~~~~i~~~~~-~al~~L~~~~~v~i~TGR~---------~~~l~ 65 (274)
++++.+.|.+.+-++.+|. || -+....-. +...+ ... +.++++.+...=+|+|--+ .+.++
T Consensus 118 ~~~i~~~fG~~~IvvsiD~k~~~~g~~~V~~~GW~-~~t~~--~~~~e~~~~~~~~~~~il~TdI~rDGtl~G~dlel~~ 194 (253)
T TIGR02129 118 LKEIVSLVGKDRLIVDLSCRKTQDGRWIVAMNKWQ-TITDL--ELNAETLEELSKYCDEFLIHAADVEGLCKGIDEELVS 194 (253)
T ss_pred HHHHHHHhCCCCEEEEEEEEEcCCCcEEEEECCCc-ccCCC--ChHHHHHHHHHhhCCEEEEeeecccCccccCCHHHHH
Confidence 4567777767778888887 56 33332110 11122 233 6666665554344444433 33444
Q ss_pred hhcCccCceEeccCcc
Q 023990 66 DFVKLAELYYAGSHGM 81 (274)
Q Consensus 66 ~~~~~~~~~li~~nG~ 81 (274)
.+....+.++|+++|+
T Consensus 195 ~l~~~~~ipVIASGGv 210 (253)
T TIGR02129 195 KLGEWSPIPITYAGGA 210 (253)
T ss_pred HHHhhCCCCEEEECCC
Confidence 4444456778888887
No 395
>PRK12352 putative carbamate kinase; Reviewed
Probab=21.77 E-value=1.6e+02 Score=26.00 Aligned_cols=59 Identities=7% Similarity=0.040 Sum_probs=36.2
Q ss_pred hhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHh
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYD 66 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~ 66 (274)
|+.+..+.+-++++|.||.+.+..+ ++...++.-+.+-++++.+.+. +.+|.+...++.
T Consensus 223 iA~aL~AdkLI~LTDV~GV~~d~~~-~~~~li~~lt~~e~~~li~~g~--i~~GgM~pKl~a 281 (316)
T PRK12352 223 LAREIHADILVITTGVEKVCIHFGK-PQQQALDRVDIATMTRYMQEGH--FPPGSMLPKIIA 281 (316)
T ss_pred HHHHhCCCEEEEEeCchhhccCCCC-CCcccccccCHHHHHHHHhcCC--cCCCCCHHHHHH
Confidence 5556678889999999999986432 2222344444445566655543 336666655544
No 396
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=21.72 E-value=1.3e+02 Score=23.58 Aligned_cols=39 Identities=26% Similarity=0.095 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHHcCcCCCCCeeEEEEcCCcCCHHHHHHH
Q 023990 182 EWDKGKALEFLLECLGFADCSNVFPVYIGDDTTDEDAFKIL 222 (274)
Q Consensus 182 ~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs~ND~~M~~~~ 222 (274)
..=|..+++.|.+.+..... .+..+||+..+|+...+.+
T Consensus 100 ~~fK~~~L~~l~~~f~~~~~--pf~agfGN~~tDv~aY~~v 138 (157)
T PF08235_consen 100 EEFKIACLRDLRALFPPDGN--PFYAGFGNRSTDVIAYKAV 138 (157)
T ss_pred HHHHHHHHHHHHHhcCCCCC--eEEEecCCcHHHHHHHHHc
Confidence 45789999999988652221 2789999999999999887
No 397
>TIGR00090 iojap_ybeB iojap-like ribosome-associated protein. This model describes a widely distributed family of bacterial proteins related to iojap from plants. It includes YbeB from E. coli. The gene iojap is a pattern-striping gene in maize, reflecting a chloroplast development defect in some cells. More recent work in bacteria suggests that the bacterial iojap-related protein physically associates with ribosomes. The function remains unknown.
Probab=21.58 E-value=75 Score=22.66 Aligned_cols=17 Identities=18% Similarity=0.180 Sum_probs=14.2
Q ss_pred CEEEEcCCCHhhHHhhc
Q 023990 52 PTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 52 ~v~i~TGR~~~~l~~~~ 68 (274)
.|+||||++...++.+.
T Consensus 31 y~VI~Tg~S~rh~~aia 47 (99)
T TIGR00090 31 YFVIASGTSSRHVKAIA 47 (99)
T ss_pred EEEEEEeCCHHHHHHHH
Confidence 69999999998877654
No 398
>PRK13586 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=21.51 E-value=2.9e+02 Score=23.05 Aligned_cols=54 Identities=17% Similarity=0.222 Sum_probs=38.5
Q ss_pred hhhhc--cCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhc--CCEEEEcC-CCHhhHHhhcC
Q 023990 5 ITEAS--KGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKY--FPTAIVTG-RCRDKVYDFVK 69 (274)
Q Consensus 5 ~~~~~--~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~--~~v~i~TG-R~~~~l~~~~~ 69 (274)
+++.| ..-..+.+.||||+. .. +.+.+.|+++.+. ..+.+--| |+.+.++.++.
T Consensus 35 ~a~~~~~~ga~~lhivDLd~a~-~~----------~~n~~~i~~i~~~~~~~v~vGGGIrs~e~~~~~l~ 93 (232)
T PRK13586 35 IASKLYNEGYTRIHVVDLDAAE-GV----------GNNEMYIKEISKIGFDWIQVGGGIRDIEKAKRLLS 93 (232)
T ss_pred HHHHHHHCCCCEEEEEECCCcC-CC----------cchHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHH
Confidence 34455 445789999999984 31 1245788888774 37888888 88899988874
No 399
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=21.27 E-value=1.8e+02 Score=25.64 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=33.5
Q ss_pred hhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHh
Q 023990 5 ITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYD 66 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~ 66 (274)
++...++.+-++++|.||-+.+. .+|+...++.-+.+-+.++...+. +.||-....+..
T Consensus 218 lA~~l~AD~LIiLTDVdGVy~~~-~~p~a~~i~~it~~e~~~~~~~g~--~~tGgM~~Kl~A 276 (310)
T TIGR00746 218 LAEEVNADILVILTDVDAVYINY-GKPDEKALREVTVEELEDYYKAGH--FAAGSMGPKVEA 276 (310)
T ss_pred HHHHhCCCEEEEEeCCCceeCCC-CCCCCcCCcCcCHHHHHHHHhcCC--cCCCCcHHHHHH
Confidence 34455777888999999999864 223323333333333444443333 347777665544
No 400
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=21.27 E-value=1.5e+02 Score=25.59 Aligned_cols=58 Identities=12% Similarity=0.111 Sum_probs=36.7
Q ss_pred hhhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 4 EITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 4 ~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
.++......+-++++|.||-+.+. ...++.-+.+.++++.+.+.+ .||.....++..+
T Consensus 188 ~LA~~L~a~klv~ltdv~GV~~~~-----~~~i~~i~~~e~~~l~~~~~~--~~ggM~~Kv~~a~ 245 (280)
T cd04237 188 AVAIALKADKLIFLTDGPGLLDDD-----GELIRELTAQEAEALLETGAL--LTNDTARLLQAAI 245 (280)
T ss_pred HHHHHcCCCEEEEEeCCCcccCCC-----CCccccCCHHHHHHHHHcCCC--CCCCHHHHHHHHH
Confidence 355566777888899999999641 122333334556666655443 4888887777654
No 401
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=21.14 E-value=1.6e+02 Score=24.28 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=17.6
Q ss_pred hhhhccCCcEEEEEecCccccC
Q 023990 5 ITEASKGKQIVMFLDYDGTLSP 26 (274)
Q Consensus 5 ~~~~~~~~~~li~~DlDGTL~~ 26 (274)
++......+-++++|.||-+..
T Consensus 159 lA~~l~A~~li~~tdV~Gv~~~ 180 (248)
T cd02115 159 LAAALKADRLVILTDVDGVYTA 180 (248)
T ss_pred HHHHcCCCEEEEEecCCeeecC
Confidence 4555677888899999999875
No 402
>PRK12434 tRNA pseudouridine synthase A; Reviewed
Probab=21.01 E-value=1.6e+02 Score=24.86 Aligned_cols=55 Identities=18% Similarity=0.220 Sum_probs=38.5
Q ss_pred EEEEEecCccccC-CccCCC-cCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 14 IVMFLDYDGTLSP-IVENPD-RAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 14 ~li~~DlDGTL~~-~~~~~~-~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
..+.+=+|||=+. +..+++ ..++.....++|.++.....-++.+||.-..+-.+.
T Consensus 4 ~~l~i~YdGt~y~G~Q~Q~~~~~TVq~~le~aL~~~~~~~~~~~~agRTD~GVHA~~ 60 (245)
T PRK12434 4 IKLTIQYDGSRYKGWQKLGNNDNTIQGKIESVLSEMTGEEIEIIGCGRTDAGVHALN 60 (245)
T ss_pred EEEEEEECCCccceEeeCCCCCCCHHHHHHHHHHHHhCCCeEEEEeccCCCCcCccC
Confidence 4577889999775 333332 347778888999888765445677999887766543
No 403
>COG0106 HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
Probab=20.98 E-value=1.5e+02 Score=24.97 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=12.9
Q ss_pred HHHHHHHhhcC-CEEEEcC--CCHhhHHhhc
Q 023990 41 RRAVRQLAKYF-PTAIVTG--RCRDKVYDFV 68 (274)
Q Consensus 41 ~~al~~L~~~~-~v~i~TG--R~~~~l~~~~ 68 (274)
.+.+.+|.+.. .-+++|| ++..+++.+.
T Consensus 180 ~~l~~~l~~~~~ipviaSGGv~s~~Di~~l~ 210 (241)
T COG0106 180 VDLVKELAEAVDIPVIASGGVSSLDDIKALK 210 (241)
T ss_pred HHHHHHHHHHhCcCEEEecCcCCHHHHHHHH
Confidence 44455555552 3344554 3444454443
No 404
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=20.80 E-value=1.1e+02 Score=27.22 Aligned_cols=43 Identities=21% Similarity=0.355 Sum_probs=32.7
Q ss_pred hHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc---CccCceEeccCcc
Q 023990 38 GKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV---KLAELYYAGSHGM 81 (274)
Q Consensus 38 ~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~---~~~~~~li~~nG~ 81 (274)
.-.+..+++|.++++=+++|.|....+.+++ +++ ...++.+|.
T Consensus 14 hfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~-y~~iG~~g~ 59 (335)
T PF04007_consen 14 HFFKNIIRELEKRGHEVLITARDKDETEELLDLYGID-YIVIGKHGD 59 (335)
T ss_pred HHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCC-eEEEcCCCC
Confidence 3468899999999988899999998877766 444 346677774
No 405
>PRK01033 imidazole glycerol phosphate synthase subunit HisF; Provisional
Probab=20.80 E-value=2.8e+02 Score=23.46 Aligned_cols=77 Identities=10% Similarity=0.071 Sum_probs=41.4
Q ss_pred hhhhhhhccCCcEEEEEecCcc------ccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCHh---------hHH
Q 023990 2 FHEITEASKGKQIVMFLDYDGT------LSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCRD---------KVY 65 (274)
Q Consensus 2 ~~~~~~~~~~~~~li~~DlDGT------L~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~~---------~l~ 65 (274)
++++.+.+.+.+..+.+|+-+- +.... .....+....+.++++.+.+ .-+++|+|+.. .+.
T Consensus 113 ~~~~~~~~~~~~i~vsiD~k~g~~~~~~v~~~g---w~~~~~~~~~e~~~~~~~~g~~~ii~~~i~~~G~~~G~d~~~i~ 189 (258)
T PRK01033 113 ITEAAERFGSQSVVVSIDVKKNLGGKFDVYTHN---GTKKLKKDPLELAKEYEALGAGEILLNSIDRDGTMKGYDLELLK 189 (258)
T ss_pred HHHHHHHhCCCcEEEEEEEecCCCCcEEEEEcC---CeecCCCCHHHHHHHHHHcCCCEEEEEccCCCCCcCCCCHHHHH
Confidence 3456666644455666775322 11110 00111234567777787774 67777887753 333
Q ss_pred hhcCccCceEeccCcc
Q 023990 66 DFVKLAELYYAGSHGM 81 (274)
Q Consensus 66 ~~~~~~~~~li~~nG~ 81 (274)
++....+.++++++|.
T Consensus 190 ~~~~~~~ipvIasGGv 205 (258)
T PRK01033 190 SFRNALKIPLIALGGA 205 (258)
T ss_pred HHHhhCCCCEEEeCCC
Confidence 4433345677777775
No 406
>cd04732 HisA HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene.
Probab=20.66 E-value=2e+02 Score=23.65 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=37.7
Q ss_pred hhhhhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC-CEEEEcCCCH---------hhHHhhcCcc
Q 023990 2 FHEITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF-PTAIVTGRCR---------DKVYDFVKLA 71 (274)
Q Consensus 2 ~~~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~-~v~i~TGR~~---------~~l~~~~~~~ 71 (274)
++++.+.+...+-.+.+|+...-+.... ..........+.++.+.+.+ .-+++++++. ..+.++....
T Consensus 112 ~~~i~~~~g~~~i~~sid~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ga~~iii~~~~~~g~~~g~~~~~i~~i~~~~ 189 (234)
T cd04732 112 VKELLKEYGGERIVVGLDAKDGKVATKG--WLETSEVSLEELAKRFEELGVKAIIYTDISRDGTLSGPNFELYKELAAAT 189 (234)
T ss_pred HHHHHHHcCCceEEEEEEeeCCEEEECC--CeeecCCCHHHHHHHHHHcCCCEEEEEeecCCCccCCCCHHHHHHHHHhc
Confidence 4455666655555566676543221110 00111234567777777774 5555566543 2333333322
Q ss_pred CceEeccCcc
Q 023990 72 ELYYAGSHGM 81 (274)
Q Consensus 72 ~~~li~~nG~ 81 (274)
+.++++.+|.
T Consensus 190 ~ipvi~~GGi 199 (234)
T cd04732 190 GIPVIASGGV 199 (234)
T ss_pred CCCEEEecCC
Confidence 3456665554
No 407
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=20.40 E-value=1.6e+02 Score=24.24 Aligned_cols=58 Identities=22% Similarity=0.253 Sum_probs=35.3
Q ss_pred hhhhhccCCcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcCCEEEEcCCCHhhHHhhc
Q 023990 4 EITEASKGKQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYFPTAIVTGRCRDKVYDFV 68 (274)
Q Consensus 4 ~~~~~~~~~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~~v~i~TGR~~~~l~~~~ 68 (274)
.++.+....+-++++|.||-+... | ...++.-..+.+.+|...+ .+||.....++...
T Consensus 162 ~lA~~l~A~~li~ltdv~Gv~~~d---~-~~~i~~i~~~e~~~l~~~~---~~tggm~~Kl~~a~ 219 (231)
T TIGR00761 162 ALAAALGAEKLVLLTDVPGILNGD---G-QSLISEIPLEEIEQLIEQG---IITGGMIPKVNAAL 219 (231)
T ss_pred HHHHHcCCCEEEEEECCCCeecCC---C-CeeccccCHHHHHHHHHcC---CCCCchHHHHHHHH
Confidence 345566778888999999999762 2 1122222223344444443 38899888777643
No 408
>PRK14531 adenylate kinase; Provisional
Probab=20.27 E-value=1.2e+02 Score=23.89 Aligned_cols=30 Identities=23% Similarity=0.230 Sum_probs=24.0
Q ss_pred EEeCCCCCCHHHHHHHHHHHcCcCCCCCeeEEEEcCC
Q 023990 176 EIRPKIEWDKGKALEFLLECLGFADCSNVFPVYIGDD 212 (274)
Q Consensus 176 ei~p~~~~sKg~al~~l~~~~~~~~~~~~~vi~~GDs 212 (274)
=+=|+ |..|++-.+.|++.+|+. .+..||-
T Consensus 7 i~G~p-GsGKsT~~~~la~~~g~~------~is~gd~ 36 (183)
T PRK14531 7 FLGPP-GAGKGTQAARLCAAHGLR------HLSTGDL 36 (183)
T ss_pred EECCC-CCCHHHHHHHHHHHhCCC------eEecccH
Confidence 34588 999999999999999874 5666664
No 409
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=20.25 E-value=2.6e+02 Score=20.38 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=6.0
Q ss_pred CEEEEcCCCHhhHH
Q 023990 52 PTAIVTGRCRDKVY 65 (274)
Q Consensus 52 ~v~i~TGR~~~~l~ 65 (274)
.+.++||=+...+.
T Consensus 84 ~~~visG~nlpmll 97 (122)
T cd00006 84 PVEVIAGVNLPMLL 97 (122)
T ss_pred CEEEEEccCHHHHH
Confidence 34444444444433
No 410
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=20.20 E-value=3e+02 Score=21.53 Aligned_cols=40 Identities=20% Similarity=0.171 Sum_probs=22.6
Q ss_pred CcEEEEEecCccccCCccCCCcCCCChHHHHHHHHHhhcC--CEEEEcCCCH
Q 023990 12 KQIVMFLDYDGTLSPIVENPDRAFMSGKMRRAVRQLAKYF--PTAIVTGRCR 61 (274)
Q Consensus 12 ~~~li~~DlDGTL~~~~~~~~~~~i~~~~~~al~~L~~~~--~v~i~TGR~~ 61 (274)
...+|++|-.|..++ |++.-+.|.++...+ .++++-|-+.
T Consensus 67 ~~~~i~LDe~Gk~~s----------S~~fA~~l~~~~~~g~~~i~F~IGGa~ 108 (157)
T PRK00103 67 GARVIALDERGKQLS----------SEEFAQELERWRDDGRSDVAFVIGGAD 108 (157)
T ss_pred CCEEEEEcCCCCcCC----------HHHHHHHHHHHHhcCCccEEEEEcCcc
Confidence 345666666666655 345556666655542 4666555543
Done!