Your job contains 1 sequence.
>023995
MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD
SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK
VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA
NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTASGAGASS
SYARASSLGARPSALVGPITGSAGALICKKGARC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023995
(274 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121914 - symbol:AT4G24780 species:3702 "Arabi... 1252 1.6e-127 1
TAIR|locus:2161992 - symbol:AT5G63180 species:3702 "Arabi... 1220 3.9e-124 1
TAIR|locus:2008550 - symbol:AT1G67750 species:3702 "Arabi... 1185 2.0e-120 1
TAIR|locus:2086656 - symbol:AT3G27400 species:3702 "Arabi... 1144 4.4e-116 1
TAIR|locus:2154384 - symbol:AT5G48900 species:3702 "Arabi... 1083 1.3e-109 1
TAIR|locus:2197808 - symbol:AT1G04680 species:3702 "Arabi... 1076 7.0e-109 1
TAIR|locus:2005487 - symbol:AT4G13710 species:3702 "Arabi... 1071 2.4e-108 1
TAIR|locus:2093131 - symbol:AT3G24670 species:3702 "Arabi... 1070 3.0e-108 1
TAIR|locus:2077622 - symbol:AT3G07010 species:3702 "Arabi... 1064 1.3e-107 1
TAIR|locus:2093761 - symbol:AT3G24230 species:3702 "Arabi... 1015 2.0e-102 1
TAIR|locus:2101998 - symbol:AT3G53190 species:3702 "Arabi... 941 1.4e-94 1
TAIR|locus:2179949 - symbol:AT5G04310 species:3702 "Arabi... 886 9.6e-89 1
TAIR|locus:2082667 - symbol:PMR6 "powdery mildew resistan... 857 1.1e-85 1
TAIR|locus:2120643 - symbol:AT4G22090 species:3702 "Arabi... 823 4.5e-82 1
TAIR|locus:2120633 - symbol:RHS14 "root hair specific 14"... 819 1.2e-81 1
TAIR|locus:2100247 - symbol:AT3G01270 species:3702 "Arabi... 805 3.7e-80 1
TAIR|locus:2008925 - symbol:AT1G11920 species:3702 "Arabi... 799 1.6e-79 1
TAIR|locus:2162182 - symbol:AT5G55720 species:3702 "Arabi... 788 2.3e-78 1
TAIR|locus:2058842 - symbol:AT2G02720 species:3702 "Arabi... 783 7.9e-78 1
TAIR|locus:2012562 - symbol:AT59 species:3702 "Arabidopsi... 779 2.1e-77 1
TAIR|locus:2204232 - symbol:AT1G30350 species:3702 "Arabi... 710 4.3e-70 1
TAIR|locus:2184797 - symbol:AT5G09280 species:3702 "Arabi... 528 8.3e-51 1
TAIR|locus:2100651 - symbol:AT3G55140 species:3702 "Arabi... 272 1.8e-29 2
TAIR|locus:2074999 - symbol:AT3G09540 species:3702 "Arabi... 269 4.1e-28 2
UNIPROTKB|A2QV36 - symbol:plyA "Probable pectate lyase A"... 179 2.5e-12 1
UNIPROTKB|Q9C2Z0 - symbol:plyA "Pectate lyase A" species:... 178 3.4e-12 1
ASPGD|ASPL0000059153 - symbol:pelA species:162425 "Emeric... 172 2.7e-11 1
UNIPROTKB|Q00645 - symbol:plyB "Pectate lyase plyB" speci... 172 2.7e-11 1
UNIPROTKB|B8NE46 - symbol:plyA "Probable pectate lyase A"... 169 6.5e-11 1
UNIPROTKB|Q2U8R6 - symbol:plyA "Probable pectate lyase A"... 169 6.5e-11 1
UNIPROTKB|B0XT32 - symbol:plyA "Probable pectate lyase A"... 159 1.3e-09 1
UNIPROTKB|Q4WIT0 - symbol:plyA "Probable pectate lyase A"... 159 1.3e-09 1
UNIPROTKB|A1CYB8 - symbol:plyA "Probable pectate lyase A"... 149 2.3e-08 1
ASPGD|ASPL0000066968 - symbol:plyA species:162425 "Emeric... 147 4.2e-08 1
UNIPROTKB|Q5AVN4 - symbol:plyA "Pectate lyase A" species:... 147 4.2e-08 1
UNIPROTKB|B8NVB7 - symbol:pelD "Probable pectin lyase D" ... 111 0.00090 1
UNIPROTKB|Q2TXS4 - symbol:pel2 "Pectin lyase 2" species:5... 111 0.00090 1
>TAIR|locus:2121914 [details] [associations]
symbol:AT4G24780 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IDA] [GO:0006949 "syncytium
formation" evidence=RCA] UniPathway:UPA00545 INTERPRO:IPR002022
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0046872
GO:GO:0045490 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL035356 EMBL:AL161562 Pfam:PF00544 SMART:SM00656 CAZy:PL1
eggNOG:COG3866 HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570
InterPro:IPR018082 PRINTS:PR00807 EMBL:AF360140 EMBL:AY087561
EMBL:U83621 IPI:IPI00528088 PIR:T05556 RefSeq:NP_001190827.1
RefSeq:NP_567707.1 UniGene:At.23543 ProteinModelPortal:Q9C5M8
SMR:Q9C5M8 STRING:Q9C5M8 PaxDb:Q9C5M8 PRIDE:Q9C5M8
EnsemblPlants:AT4G24780.1 EnsemblPlants:AT4G24780.2 GeneID:828580
KEGG:ath:AT4G24780 TAIR:At4g24780 InParanoid:Q9C5M8 OMA:NNDYSHW
PhylomeDB:Q9C5M8 ProtClustDB:CLSN2917605 Genevestigator:Q9C5M8
GermOnline:AT4G24780 Uniprot:Q9C5M8
Length = 408
Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 220/274 (80%), Positives = 245/274 (89%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
MTI+LKEELIMNSFKTIDGRGASVHI+GGPCITIQYVTNIIIHG++IHDCK+GGNAMVR
Sbjct: 135 MTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRS 194
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SPRHFGWRT+SDGDGVSIFGG+H+WVDHCS SNC+DGL+DAI GSTAIT+SNN MTHHDK
Sbjct: 195 SPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDK 254
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSDTY++DKNMQVTIAFNHFGEGLVQR+PRCRHGYFHVVNNDYTHWEMYAIGGSA
Sbjct: 255 VMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA 314
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
NPTINSQGNRF AP+ FSKEVTKHEDAPESEW+ WNWRS GDL++NGAFFT
Sbjct: 315 NPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASS 374
Query: 241 XXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
+PS+LVGP+T ++GAL C+KG+RC
Sbjct: 375 SYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408
>TAIR|locus:2161992 [details] [associations]
symbol:AT5G63180 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB008265
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 EMBL:AY058197 IPI:IPI00519121 RefSeq:NP_568967.1
UniGene:At.8839 ProteinModelPortal:Q93Z25 SMR:Q93Z25 STRING:Q93Z25
PaxDb:Q93Z25 PRIDE:Q93Z25 EnsemblPlants:AT5G63180.1 GeneID:836439
KEGG:ath:AT5G63180 TAIR:At5g63180 InParanoid:Q93Z25 OMA:HVGEITI
PhylomeDB:Q93Z25 ProtClustDB:CLSN2917788 Genevestigator:Q93Z25
GermOnline:AT5G63180 Uniprot:Q93Z25
Length = 432
Score = 1220 (434.5 bits), Expect = 3.9e-124, P = 3.9e-124
Identities = 219/276 (79%), Positives = 242/276 (87%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
MTI+LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHGL+IHDCK+GGN VRD
Sbjct: 157 MTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRD 216
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H+G+RTVSDGDGVSIFGG+H+WVDHCSLSNC+DGL+DAI GSTAITISNN++THH+K
Sbjct: 217 SPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNK 276
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSDTY QDKNMQVTIAFNHFGEGLVQR+PRCRHGYFHVVNNDYTHWEMYAIGGSA
Sbjct: 277 VMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA 336
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXX--XX 238
NPTINSQGNRF APD + SKEVTKHEDAPE EWRNWNWRSEGDL++NGAFFT
Sbjct: 337 NPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYSGAGPAK 396
Query: 239 XXXXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
RPS+ VG IT ++GAL CK+G+ C
Sbjct: 397 SSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432
>TAIR|locus:2008550 [details] [associations]
symbol:AT1G67750 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0030570 "pectate lyase
activity" evidence=ISS] UniPathway:UPA00545 INTERPRO:IPR002022
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC008113
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 EMBL:AF462797 EMBL:AY101535 EMBL:AY088778
IPI:IPI00547564 RefSeq:NP_564906.1 UniGene:At.20989
ProteinModelPortal:Q9FXD8 SMR:Q9FXD8 PaxDb:Q9FXD8 PRIDE:Q9FXD8
EnsemblPlants:AT1G67750.1 GeneID:843100 KEGG:ath:AT1G67750
TAIR:At1g67750 InParanoid:Q9FXD8 OMA:VTKYEDA PhylomeDB:Q9FXD8
ProtClustDB:CLSN2917394 Genevestigator:Q9FXD8 GermOnline:AT1G67750
Uniprot:Q9FXD8
Length = 408
Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
Identities = 209/274 (76%), Positives = 235/274 (85%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+NIHDCK+ GNA VRD
Sbjct: 135 MVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRD 194
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H+GWRT SDGD VSIFGG+H+WVDHCSLSNC DGL+DAIHGSTAITISNN+++HH+K
Sbjct: 195 SPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNK 254
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSD+YT+DKNMQVTIAFNHFGEGLVQR+PRCRHGYFHVVNNDYTHW+MYAIGGSA
Sbjct: 255 VMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSA 314
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
PTINSQGNRF AP+ KEVTK+EDAP S+W+ WNWRSEGDL +NGAFFT
Sbjct: 315 APTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFFTPSGGGASS 374
Query: 241 XXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
RPS+LV +T +AGAL C+KG+RC
Sbjct: 375 SYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408
>TAIR|locus:2086656 [details] [associations]
symbol:AT3G27400 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0030570 "pectate lyase
activity" evidence=ISS] UniPathway:UPA00545 INTERPRO:IPR002022
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 EMBL:AB024028 Pfam:PF00544 SMART:SM00656 CAZy:PL1
eggNOG:COG3866 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 IPI:IPI00547258 IPI:IPI01020100 RefSeq:NP_189376.1
UniGene:At.23327 ProteinModelPortal:Q9LTZ0 SMR:Q9LTZ0 STRING:Q9LTZ0
PaxDb:Q9LTZ0 PRIDE:Q9LTZ0 GeneID:822361 KEGG:ath:AT3G27400
TAIR:At3g27400 InParanoid:Q9LTZ0 OMA:CITIHYA Genevestigator:Q9LTZ0
GermOnline:AT3G27400 Uniprot:Q9LTZ0
Length = 412
Score = 1144 (407.8 bits), Expect = 4.4e-116, P = 4.4e-116
Identities = 200/274 (72%), Positives = 226/274 (82%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M IRLK+ELI+ SFKTIDGRG+SVHI GPC+ I Y TNIIIHG+NIHDCK G M++D
Sbjct: 139 MVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMIKD 198
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
P H GW SDGD V+IFGG H+W+DHCSLSNCDDGL+DAIHGSTAITISNN MTHHDK
Sbjct: 199 GPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDK 258
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSD+YTQDKNMQVTIAFNHFGEGLVQR+PRCRHGYFHVVNNDYTHWEMYAIGGSA
Sbjct: 259 VMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA 318
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
+PTI SQGNRF AP+ F+KEVTKHEDAPES+WR+WNWRSEGD+++NGA+F
Sbjct: 319 SPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRESGAEAPS 378
Query: 241 XXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
RPS+LVG IT +AG L C++G RC
Sbjct: 379 TYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412
>TAIR|locus:2154384 [details] [associations]
symbol:AT5G48900 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0016829 "lyase
activity" evidence=ISS] [GO:0030570 "pectate lyase activity"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0008361 "regulation of cell size" evidence=RCA]
[GO:0009926 "auxin polar transport" evidence=RCA] [GO:0010015 "root
morphogenesis" evidence=RCA] [GO:0040007 "growth" evidence=RCA]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB017061
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 EMBL:AY050795 EMBL:AY050404 EMBL:AY086099
IPI:IPI00520930 RefSeq:NP_568705.1 UniGene:At.26564
ProteinModelPortal:Q93WF1 SMR:Q93WF1 STRING:Q93WF1 PaxDb:Q93WF1
PRIDE:Q93WF1 EnsemblPlants:AT5G48900.1 GeneID:834948
KEGG:ath:AT5G48900 TAIR:At5g48900 InParanoid:Q93WF1 OMA:NAGALNC
PhylomeDB:Q93WF1 ProtClustDB:CLSN2684811 Genevestigator:Q93WF1
GermOnline:AT5G48900 Uniprot:Q93WF1
Length = 417
Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
Identities = 193/274 (70%), Positives = 225/274 (82%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I LKEELIMNSFKTIDGRG +VHIA G CITIQ+VTNIIIHG++IHDC+ GNAMVR
Sbjct: 144 MVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRPTGNAMVRS 203
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H+GWRT++DGDG+SIFG +HIW+DH SLSNC DGL+DA+ STAITISNN+ THH++
Sbjct: 204 SPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMASTAITISNNYFTHHNE 263
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSDTYT+DK MQVTIA+NHFGEGL+QR+PRCRHGYFHVVNNDYTHWEMYAIGGSA
Sbjct: 264 VMLLGHSDTYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA 323
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
+PTINSQGNR+ AP F+KEVTK + A + +WR+WNWRSEGDL +NGAFFT
Sbjct: 324 SPTINSQGNRYLAPRNRFAKEVTKRDYAGQWQWRHWNWRSEGDLFLNGAFFTRSGSGLGA 383
Query: 241 XXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
+ S+LVG IT +AGAL C+ G RC
Sbjct: 384 SYARASSLAAKSSSLVGVITYNAGALNCRGGRRC 417
>TAIR|locus:2197808 [details] [associations]
symbol:AT1G04680 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IDA] [GO:0000271 "polysaccharide
biosynthetic process" evidence=RCA] [GO:0007389 "pattern
specification process" evidence=RCA] [GO:0008361 "regulation of
cell size" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0009825 "multidimensional cell
growth" evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0009926 "auxin polar transport" evidence=RCA]
[GO:0009932 "cell tip growth" evidence=RCA] [GO:0010015 "root
morphogenesis" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0043481 "anthocyanin
accumulation in tissues in response to UV light" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] [GO:0071555 "cell
wall organization" evidence=RCA] UniPathway:UPA00545
INTERPRO:IPR002022 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0016020 GO:GO:0046872 GO:GO:0045490 Gene3D:2.160.20.10
InterPro:IPR012334 InterPro:IPR011050 SUPFAM:SSF51126 EMBL:AC002376
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 EMBL:AY065034 EMBL:AY054200 EMBL:AY066033
EMBL:AY087724 EMBL:U83620 IPI:IPI00526911 PIR:F86179
RefSeq:NP_563715.1 UniGene:At.10458 ProteinModelPortal:Q940Q1
SMR:Q940Q1 STRING:Q940Q1 PaxDb:Q940Q1 PRIDE:Q940Q1
EnsemblPlants:AT1G04680.1 GeneID:839452 KEGG:ath:AT1G04680
TAIR:At1g04680 InParanoid:Q940Q1 OMA:LALTEMS PhylomeDB:Q940Q1
ProtClustDB:CLSN2916964 Genevestigator:Q940Q1 GermOnline:AT1G04680
Uniprot:Q940Q1
Length = 431
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 189/274 (68%), Positives = 223/274 (81%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I+LK+ELI+NSFKTIDGRGA+VHIA G CITIQ+VTN+I+HGL+IHDCK GNAMVR
Sbjct: 156 MVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRS 215
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
S HFGWRT++DGD +SIFG +H+W+DH SLS+C DGLVDA+ GSTAITISNN +THH++
Sbjct: 216 SETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNE 275
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSD+Y +DK MQVTIA+NHFG GL+QR+PRCRHGYFHVVNNDYTHWEMYAIGGSA
Sbjct: 276 VMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA 335
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
NPTINSQGNR+AAP F+KEVTK D P S W+ WNWRSEGDL+ NGA+FT
Sbjct: 336 NPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASG 395
Query: 241 XXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
+ S+LVG IT AGAL C++G +C
Sbjct: 396 SYARASSLSAKSSSLVGHITSDAGALPCRRGRQC 429
>TAIR|locus:2005487 [details] [associations]
symbol:AT4G13710 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 EMBL:AL035528 EMBL:AL161537 Pfam:PF00544
SMART:SM00656 CAZy:PL1 eggNOG:COG3866 HOGENOM:HOG000237948
KO:K01728 GO:GO:0030570 InterPro:IPR018082 PRINTS:PR00807
EMBL:AF424592 EMBL:AY142013 EMBL:U83622 IPI:IPI00540091 PIR:H85148
PIR:T05240 RefSeq:NP_567409.1 UniGene:At.22271
ProteinModelPortal:Q944R1 SMR:Q944R1 STRING:Q944R1 PRIDE:Q944R1
EnsemblPlants:AT4G13710.1 GeneID:827005 KEGG:ath:AT4G13710
TAIR:At4g13710 InParanoid:Q944R1 OMA:NSSTMAA PhylomeDB:Q944R1
ProtClustDB:CLSN2917539 Genevestigator:Q944R1 GermOnline:AT4G13710
Uniprot:Q944R1
Length = 470
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 191/274 (69%), Positives = 222/274 (81%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I LK+ELIMNSFKTID RG++VHIA G CITIQ++TN+IIHGL+IHDCK GNAMVR
Sbjct: 197 MVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRS 256
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP HFGWRT++DGD VSIFG +HIW+DH SLS+C DGLVDA+ GSTAIT+SNN THH++
Sbjct: 257 SPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNE 316
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSD+YT+DK MQVTIA+NHFGEGLVQR+PRCRHGYFHVVNNDYTHWEMYAIGGSA
Sbjct: 317 VMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA 376
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
PTINSQGNR+AAP F+KEVTK + SEW+ WNWRSEGDL++NGAFF
Sbjct: 377 EPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASA 436
Query: 241 XXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
+PS++V IT +AGAL C+KG C
Sbjct: 437 SYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC 470
>TAIR|locus:2093131 [details] [associations]
symbol:AT3G24670 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0030570 "pectate lyase
activity" evidence=ISS] UniPathway:UPA00545 INTERPRO:IPR002022
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0045490
EMBL:AP000740 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866 EMBL:AK118210
IPI:IPI00546851 RefSeq:NP_189110.1 UniGene:At.43520
ProteinModelPortal:Q9LJ42 SMR:Q9LJ42 STRING:Q9LJ42 PRIDE:Q9LJ42
EnsemblPlants:AT3G24670.1 GeneID:822063 KEGG:ath:AT3G24670
TAIR:At3g24670 HOGENOM:HOG000237948 InParanoid:Q9LJ42 KO:K01728
OMA:IKNSTER PhylomeDB:Q9LJ42 ProtClustDB:CLSN2684519
Genevestigator:Q9LJ42 GermOnline:AT3G24670 GO:GO:0030570
InterPro:IPR018082 PRINTS:PR00807 Uniprot:Q9LJ42
Length = 440
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 188/274 (68%), Positives = 224/274 (81%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I L +ELIMNSFKTIDGRG +V IAGG CITIQYVTNIIIHG+N+HDC++ GNAMVR
Sbjct: 167 MVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCRRTGNAMVRS 226
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H+GWRT++DGD +SIFG +HIW+DH SLSNC DGL+DAI GSTAITISNN+MTHH++
Sbjct: 227 SPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNE 286
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VML+GHSD+YT+DK MQVTIA+NHFGEGL+QR+PRCRHGYFHVVNNDYTHW MYAIGGSA
Sbjct: 287 VMLMGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSA 346
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
NPTINSQGNRF AP F+KEVTK + + EW+ WNWRS+GDLM+NGA+FT
Sbjct: 347 NPTINSQGNRFLAPGNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSGAAAPA 406
Query: 241 XXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
+P+++V +T S+GAL C+ G RC
Sbjct: 407 SYARASSLGAKPASVVSMLTYSSGALKCRIGMRC 440
>TAIR|locus:2077622 [details] [associations]
symbol:AT3G07010 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 EMBL:AC016827 Pfam:PF00544 SMART:SM00656 CAZy:PL1
eggNOG:COG3866 HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570
InterPro:IPR018082 PRINTS:PR00807 ProtClustDB:CLSN2684811
EMBL:AY085026 IPI:IPI00517964 RefSeq:NP_187357.1 UniGene:At.18756
ProteinModelPortal:Q9M8Z8 SMR:Q9M8Z8 STRING:Q9M8Z8 PaxDb:Q9M8Z8
PRIDE:Q9M8Z8 EnsemblPlants:AT3G07010.1 GeneID:819886
KEGG:ath:AT3G07010 TAIR:At3g07010 InParanoid:Q9M8Z8 OMA:IANGACL
PhylomeDB:Q9M8Z8 Genevestigator:Q9M8Z8 GermOnline:AT3G07010
Uniprot:Q9M8Z8
Length = 416
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 188/274 (68%), Positives = 222/274 (81%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I LK+ELIMNSFKTIDGRG +VHIA G C+TIQYVTNII+HG+++HDCK GNAMVR
Sbjct: 143 MVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRS 202
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H+G+R+++DGD +SIFG +HIW+DH SLSNC DGLVDA+ STAIT+SNNF THH++
Sbjct: 203 SPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNE 262
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSD+YT+DK MQVTIA+NHFGEGL+QR+PRCRHGYFHVVNNDYTHWEMYAIGGSA
Sbjct: 263 VMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA 322
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
PTINSQGNRF AP F+KEVTK E ES+W++WNWRSEGDL +NGAFFT
Sbjct: 323 GPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEGDLFLNGAFFTRSGAGAGA 382
Query: 241 XXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
+ S+LVG +T +GAL C+ G RC
Sbjct: 383 NYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416
>TAIR|locus:2093761 [details] [associations]
symbol:AT3G24230 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB028621
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 EMBL:BX823056 IPI:IPI00540717 RefSeq:NP_189065.2
UniGene:At.50221 ProteinModelPortal:Q9LRM5 SMR:Q9LRM5
EnsemblPlants:AT3G24230.1 GeneID:822010 KEGG:ath:AT3G24230
TAIR:At3g24230 InParanoid:Q9LRM5 OMA:GDAINIF PhylomeDB:Q9LRM5
ProtClustDB:CLSN2918543 Genevestigator:Q9LRM5 GermOnline:AT3G24230
Uniprot:Q9LRM5
Length = 452
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 182/274 (66%), Positives = 216/274 (78%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I+LK+ELIMNSFKTID RGA+VHIA G CITIQ +TN+I+HGL+IHDCK+ GN VR
Sbjct: 179 MVIKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDCKRTGNVTVRS 238
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP G+R +DGD ++IFG +HIW+DH SLSNC DGLVD ++GSTAITISNN THHD+
Sbjct: 239 SPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDE 298
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGH+D+YT+DK MQVT+A+NHFGEGL+QR+PRCRHGYFHVVNNDYTHW+MYAIGGSA
Sbjct: 299 VMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSA 358
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
NPTINSQGNRFAAP +KEVTK D +EW WNWRSE DL+VNGAFFT
Sbjct: 359 NPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRSEKDLLVNGAFFTPSGEGASG 418
Query: 241 XXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
+P+++V IT SAGAL C++G C
Sbjct: 419 DSQTLSLPA-KPASMVDAITASAGALSCRRGKPC 451
>TAIR|locus:2101998 [details] [associations]
symbol:AT3G53190 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
[GO:0031225 "anchored to membrane" evidence=TAS]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0031225 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL132958
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 EMBL:AY084835 IPI:IPI00541244 PIR:T46165
RefSeq:NP_566979.1 UniGene:At.28000 UniGene:At.74285
ProteinModelPortal:Q9SCP2 SMR:Q9SCP2 STRING:Q9SCP2 PRIDE:Q9SCP2
EnsemblPlants:AT3G53190.1 GeneID:824485 KEGG:ath:AT3G53190
TAIR:At3g53190 InParanoid:Q9SCP2 OMA:FFSHHNE PhylomeDB:Q9SCP2
ProtClustDB:CLSN2689138 Genevestigator:Q9SCP2 GermOnline:AT3G53190
Uniprot:Q9SCP2
Length = 483
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 165/266 (62%), Positives = 200/266 (75%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I+LK+ELI NS+KT+DGRGA+VHI GG CIT+QYV+NIIIH ++IH C + GN VR
Sbjct: 149 MMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHCYQSGNTNVRS 208
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H+G+RT SDGDG+SIFG IW+DHCSLS C DGL+DA+ GST ITISNNF +HH++
Sbjct: 209 SPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITISNNFFSHHNE 268
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSD Y D MQVTIAFNHFGE L+QR+PRCR GY HVVNND+T WEMYAIGGS
Sbjct: 269 VMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMPRCRRGYIHVVNNDFTQWEMYAIGGSG 328
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
NPTINSQGNR+ AP F+KEVTK + P+ +W+ WNWRSEGD++VNGAFF
Sbjct: 329 NPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWKGWNWRSEGDILVNGAFFVASGEGAEM 388
Query: 241 XXXXXXXXXXRPSALVGPITGSAGAL 266
+ ++ + IT +G L
Sbjct: 389 RYEKAYSVEPKSASFITQITFHSGVL 414
>TAIR|locus:2179949 [details] [associations]
symbol:AT5G04310 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0030570 "pectate lyase
activity" evidence=ISS] [GO:0031225 "anchored to membrane"
evidence=TAS] INTERPRO:IPR002022 EMBL:CP002688 GO:GO:0031225
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 GO:GO:0016829 Pfam:PF00544 SMART:SM00656 KO:K01728
InterPro:IPR018082 PRINTS:PR00807 IPI:IPI00548227
RefSeq:NP_196051.2 UniGene:At.26658 ProteinModelPortal:F4JW80
SMR:F4JW80 PRIDE:F4JW80 EnsemblPlants:AT5G04310.1 GeneID:830310
KEGG:ath:AT5G04310 OMA:SASHHIW ArrayExpress:F4JW80 Uniprot:F4JW80
Length = 518
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 159/264 (60%), Positives = 193/264 (73%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I+LK ELI+ S+KTIDGRG ++ I G C+TIQ V+++IIH ++IH CK GN +V
Sbjct: 170 MGIKLKHELIIGSYKTIDGRGTNIQITGHGCLTIQQVSHVIIHNVHIHHCKPSGNTLVAS 229
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H G+R VSDGDG+S+ HIWVDHCSL C DGL+D I STA+TISNN+ +HHD+
Sbjct: 230 SPTHVGFRGVSDGDGISVSASHHIWVDHCSLGYCADGLIDVILASTAVTISNNYFSHHDE 289
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGH D YT DK MQVTIAFNHFGEGLVQR+PRCRHGY HVVNND+T WEMYAIGGSA
Sbjct: 290 VMLLGHDDRYTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSA 349
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
+PTINSQGNR+ AP +KEVTK D+ E W WNWR+EGD+MVNGAFF
Sbjct: 350 SPTINSQGNRYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTEGDVMVNGAFFVPSGDGVSP 409
Query: 241 XXXXXXXXXXRPSALVGPITGSAG 264
+ +A++ +T +AG
Sbjct: 410 AYARATSVQPKAAAIIDQLTVNAG 433
>TAIR|locus:2082667 [details] [associations]
symbol:PMR6 "powdery mildew resistant 6" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0030570 "pectate
lyase activity" evidence=ISS] [GO:0031225 "anchored to membrane"
evidence=TAS] [GO:0009814 "defense response, incompatible
interaction" evidence=IMP] [GO:0042547 "cell wall modification
involved in multidimensional cell growth" evidence=IMP] [GO:0046658
"anchored to plasma membrane" evidence=ISS] [GO:0000271
"polysaccharide biosynthetic process" evidence=RCA] [GO:0009825
"multidimensional cell growth" evidence=RCA] [GO:0009932 "cell tip
growth" evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048767 "root hair
elongation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL049655 GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 GO:GO:0046658 GO:GO:0042547 GO:GO:0009814
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 EMBL:AF534079 EMBL:AY058870 EMBL:AY074331
EMBL:AY096739 IPI:IPI00533537 PIR:T06728 RefSeq:NP_191052.2
UniGene:At.3109 ProteinModelPortal:Q93Z04 SMR:Q93Z04 STRING:Q93Z04
EnsemblPlants:AT3G54920.1 GeneID:824657 KEGG:ath:AT3G54920
TAIR:At3g54920 InParanoid:Q93Z04 OMA:SAVHITG PhylomeDB:Q93Z04
ProtClustDB:CLSN2917969 Genevestigator:Q93Z04 GermOnline:AT3G54920
Uniprot:Q93Z04
Length = 501
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 159/265 (60%), Positives = 192/265 (72%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M IRLK+ELI+NS+KT+DGRG++VHI G C+T+QYV +IIIH L+I+DCK
Sbjct: 155 MLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAG----- 209
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
F R SDGDG+SIFG IWVDHCS+S+C DGL+DA+ GSTAITISNN+ THHD+
Sbjct: 210 ----FEKRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDE 265
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGH D Y D MQVTIAFNHFG+GLVQR+PRCR GY HVVNND+T W+MYAIGGS
Sbjct: 266 VMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSG 325
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPES-EWRNWNWRSEGDLMVNGAFFTXXXXXXX 239
NPTINSQGNR++AP +KEVTK D+ + EW NWNWR+EGDLM NGAFF
Sbjct: 326 NPTINSQGNRYSAPSDPSAKEVTKRVDSKDDGEWSNWNWRTEGDLMENGAFFVASGEGMS 385
Query: 240 XXXXXXXXXXXRPSALVGPITGSAG 264
+ ++LV +T +AG
Sbjct: 386 SMYSKASSVDPKAASLVDQLTRNAG 410
>TAIR|locus:2120643 [details] [associations]
symbol:AT4G22090 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0045490 EMBL:AL022140
EMBL:AL161556 Gene3D:2.160.20.10 InterPro:IPR012334
InterPro:IPR011050 SUPFAM:SSF51126 Pfam:PF00544 SMART:SM00656
CAZy:PL1 eggNOG:COG3866 HOGENOM:HOG000237948 KO:K01728
GO:GO:0030570 InterPro:IPR018082 PRINTS:PR00807
ProtClustDB:CLSN2915940 IPI:IPI00547426 PIR:T49116
RefSeq:NP_193940.1 UniGene:At.54466 ProteinModelPortal:O65457
SMR:O65457 EnsemblPlants:AT4G22090.1 GeneID:828298
KEGG:ath:AT4G22090 TAIR:At4g22090 InParanoid:O65457 OMA:ASSHIWI
PhylomeDB:O65457 Genevestigator:O65457 GermOnline:AT4G22090
Uniprot:O65457
Length = 394
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 152/275 (55%), Positives = 187/275 (68%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I L EL++NS+KTIDGRGA V IA GPCITIQ VTN+I+HG++IHDCK G + VR
Sbjct: 121 MVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKSGKVRS 180
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H G R SDGD ++IFG +++W+DHC L++C DGL+D IH STAITISNN+ T HDK
Sbjct: 181 SPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQHDK 240
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGH+D + +D M+VT+AFNHFG GLV+R+PR R GY HV NN Y W MYAIGGSA
Sbjct: 241 VMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSA 300
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
+PTI S+GN F A D+++SKEVTK E + W NW WR+ D+ NGAFF
Sbjct: 301 DPTIFSEGNYFIASDKSYSKEVTKRE--VKGGWNNWRWRTSNDVFKNGAFFVPSGYGSIP 358
Query: 241 X-XXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
P LV +T AG L C + C
Sbjct: 359 LPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393
>TAIR|locus:2120633 [details] [associations]
symbol:RHS14 "root hair specific 14" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0030570 "pectate
lyase activity" evidence=ISS] UniPathway:UPA00545
INTERPRO:IPR002022 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0045490 EMBL:AL022140 EMBL:AL161556
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 Pfam:PF00544
SMART:SM00656 CAZy:PL1 eggNOG:COG3866 HOGENOM:HOG000237948
KO:K01728 GO:GO:0030570 InterPro:IPR018082 PRINTS:PR00807
EMBL:BX826855 IPI:IPI00538420 PIR:T49115 RefSeq:NP_193939.1
UniGene:At.50361 ProteinModelPortal:O65456 SMR:O65456
EnsemblPlants:AT4G22080.1 GeneID:828297 KEGG:ath:AT4G22080
TAIR:At4g22080 InParanoid:O65456 OMA:KNELIMN PhylomeDB:O65456
ProtClustDB:CLSN2915940 Genevestigator:O65456 GermOnline:AT4G22080
Uniprot:O65456
Length = 394
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 153/275 (55%), Positives = 186/275 (67%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I L+ EL++NS+KTIDGRGA V IA GPCITIQ VTN+I+HG++IHDCK G MVR
Sbjct: 121 MVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKYGMVRS 180
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H G R SDGD ++IFG ++IW+DHC L++C DGL+D IH ST ITISNN+ T HDK
Sbjct: 181 SPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHASTGITISNNYFTQHDK 240
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGH+D + QD M+VT+AFNHFG GLV+R+PR R GY HV NN Y W MYAIGGSA
Sbjct: 241 VMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSA 300
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
+PTI S+GN F A D++ SKEVTK E + W NW WR+ D+ NGA+F
Sbjct: 301 DPTIFSEGNYFIASDKSNSKEVTKRE--VKGGWNNWRWRTSKDVFKNGAYFVPSGYGSIS 358
Query: 241 X-XXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
P LV +T AG L C + C
Sbjct: 359 LPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393
>TAIR|locus:2100247 [details] [associations]
symbol:AT3G01270 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016829 "lyase
activity" evidence=ISS] [GO:0030570 "pectate lyase activity"
evidence=IEA;ISS] InterPro:IPR007524 Pfam:PF04431
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 EMBL:AC008261 EMBL:AC010676 Pfam:PF00544
SMART:SM00656 CAZy:PL1 eggNOG:COG3866 HOGENOM:HOG000237948
KO:K01728 GO:GO:0030570 InterPro:IPR018082 PRINTS:PR00807
EMBL:AY084341 IPI:IPI00532794 RefSeq:NP_186776.1 UniGene:At.18310
ProteinModelPortal:Q9SRH4 SMR:Q9SRH4 STRING:Q9SRH4
EnsemblPlants:AT3G01270.1 GeneID:821142 KEGG:ath:AT3G01270
TAIR:At3g01270 InParanoid:Q9SRH4 OMA:IAPPNIA PhylomeDB:Q9SRH4
ProtClustDB:CLSN2684987 Genevestigator:Q9SRH4 GermOnline:AT3G01270
Uniprot:Q9SRH4
Length = 475
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 155/276 (56%), Positives = 191/276 (69%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M+IRL +EL++ S KTID RGA+VHIA G IT+QYV NIIIHGL++H K ++RD
Sbjct: 200 MSIRLSQELMITSDKTIDARGANVHIAYGAGITMQYVHNIIIHGLHVHHIVKSSGGLIRD 259
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
S HFG R +DGDG+SIFG T+IW+DH S+S C DGL+DAI GSTAITISN+ THH+
Sbjct: 260 SINHFGHRGEADGDGISIFGATNIWLDHISMSKCQDGLIDAIMGSTAITISNSHFTHHND 319
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLG + DK MQVT+A+NHFG+GLVQR+PR R G+ HVVNNDYTHWE+YAIGGS
Sbjct: 320 VMLLGAQNNNMDDKKMQVTVAYNHFGKGLVQRMPRVRWGFVHVVNNDYTHWELYAIGGSQ 379
Query: 181 NPTINSQGNRFAAPD-RAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXX 239
PTI S GNRF AP + +EVTK + A ESEW+NWNWRSE D+ +N A+F
Sbjct: 380 GPTILSHGNRFIAPPHKQHYREVTKRDYASESEWKNWNWRSEKDVFMNNAYFRQSGNPHF 439
Query: 240 XXXXXXXXXXXRPSAL-VGPITGSAGALICKKGARC 274
+ + V +T AGAL C+ G C
Sbjct: 440 KCSHSRQQMIKPKNGMAVSKLTKYAGALDCRVGKAC 475
>TAIR|locus:2008925 [details] [associations]
symbol:AT1G11920 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0045490 EMBL:AC002131
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 IPI:IPI00532903 IPI:IPI01020131 PIR:H86253
RefSeq:NP_172656.1 UniGene:At.51578 ProteinModelPortal:O65388
SMR:O65388 GeneID:837742 KEGG:ath:AT1G11920 TAIR:At1g11920
InParanoid:O65388 OMA:DSSHIWI ArrayExpress:O65388
Genevestigator:O65388 GermOnline:AT1G11920 Uniprot:O65388
Length = 384
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 150/275 (54%), Positives = 185/275 (67%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I L+ ELIMNS+KTIDGRGA V IA GPCITIQ+V+++IIHG++IHDCK G + VR
Sbjct: 111 MVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRS 170
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
SP H G R SDGD ++IF +HIW+DHC S C DGL+D +H STA+TISNN+ T HDK
Sbjct: 171 SPTHVGSRKGSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDK 230
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGH+D +DK M+VTIAFNHFG GL++R+PR R GY HV NN Y W+MYAIGGSA
Sbjct: 231 VMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSA 290
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
+PTI S+GN F A D K+VTK D+ +W+ W WR+ D+ NGA+F
Sbjct: 291 DPTIFSEGNYFVASDDPSKKQVTKRIDSGY-DWKRWKWRTSKDVFKNGAYFVPSGYGTVT 349
Query: 241 XXXXXXXXX-XRPSALVGPITGSAGALICKKGARC 274
+LV +T SAG L C G C
Sbjct: 350 PLYGRAERFPVSHGSLVPLLTSSAGPLHCYSGRIC 384
>TAIR|locus:2162182 [details] [associations]
symbol:AT5G55720 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 EMBL:AB009050 Pfam:PF00544 SMART:SM00656 CAZy:PL1
eggNOG:COG3866 HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570
InterPro:IPR018082 PRINTS:PR00807 IPI:IPI00535153
RefSeq:NP_200383.1 UniGene:At.29429 ProteinModelPortal:Q9FM66
SMR:Q9FM66 STRING:Q9FM66 PaxDb:Q9FM66 PRIDE:Q9FM66
EnsemblPlants:AT5G55720.1 GeneID:835666 KEGG:ath:AT5G55720
TAIR:At5g55720 InParanoid:Q9FM66 OMA:TISNSYM PhylomeDB:Q9FM66
ProtClustDB:CLSN2916592 Genevestigator:Q9FM66 GermOnline:AT5G55720
Uniprot:Q9FM66
Length = 392
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 152/275 (55%), Positives = 193/275 (70%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I+LK++L + S+KTIDGRG +V IA GPC+T+ V+NIII+ L IHDC + R+
Sbjct: 124 MVIQLKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVP----VKRN 179
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
+ G SDGDG+SIF IW+DHC+L C DGL+DA++GST ITISN++M +H++
Sbjct: 180 ALSSLGG--YSDGDGISIFESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNE 237
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGHSD Y+ D++M+VTIAFN+FGEGLVQR+PRCRHGYFH+VNN Y W+MYAIGGSA
Sbjct: 238 VMLLGHSDEYSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSA 297
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAP-ESEWRNWNWRSEGDLMVNGAFFTXXXXXXX 239
NPTI SQGN F A + F+KEVTK E A + EW+ WNW+SEGD MVNGAFFT
Sbjct: 298 NPTIFSQGNVFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNGAFFTPSGKEDS 357
Query: 240 XXXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
RP++L+ S G L C+ C
Sbjct: 358 PSYAKFSSMVARPASLLKTTHPSVGVLSCEIDQAC 392
>TAIR|locus:2058842 [details] [associations]
symbol:AT2G02720 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016829 "lyase
activity" evidence=ISS] [GO:0030570 "pectate lyase activity"
evidence=IEA;ISS] InterPro:IPR007524 Pfam:PF04431
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 EMBL:AC002521 Pfam:PF00544 SMART:SM00656 CAZy:PL1
eggNOG:COG3866 HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570
InterPro:IPR018082 PRINTS:PR00807 ProtClustDB:CLSN2682943
EMBL:BT005757 IPI:IPI00523896 PIR:T00856 RefSeq:NP_178375.1
UniGene:At.41462 UniGene:At.48411 ProteinModelPortal:O64510
SMR:O64510 PaxDb:O64510 PRIDE:O64510 EnsemblPlants:AT2G02720.1
GeneID:814801 KEGG:ath:AT2G02720 TAIR:At2g02720 InParanoid:O64510
OMA:DGINIFG PhylomeDB:O64510 Genevestigator:O64510
GermOnline:AT2G02720 Uniprot:O64510
Length = 455
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 146/280 (52%), Positives = 190/280 (67%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I+L++ELI+ + KTIDGRGA ++I GG +T+Q+V N+IIH ++I K+G ++ D
Sbjct: 176 MIIKLQQELIITNDKTIDGRGAKIYITGGAGLTLQFVRNVIIHNIHIKQIKRGAGGLIID 235
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
S +HFG RTVSDGDG++IFG T++W+DH S+++C DG++DAI GSTAITISN+ T HD+
Sbjct: 236 SEQHFGLRTVSDGDGINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTDHDE 295
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VML G ++ DK MQ+T+AFNHFG+ L QR+PR R G HVVNNDYTHWEMYAIGG+
Sbjct: 296 VMLFGGTNKDVIDKKMQITVAFNHFGKRLKQRMPRVRFGLVHVVNNDYTHWEMYAIGGNM 355
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
NPTI SQGNRF AP SK+VTK E P EW++WNW+SE D +NGA+F
Sbjct: 356 NPTIISQGNRFIAPPIEDSKQVTKREYTPYPEWKSWNWQSEKDYFLNGAYFVQSGKANAW 415
Query: 241 XXX------XXXXXXXRPSALVGPITGSAGALICKKGARC 274
+P V +T AG L CK G C
Sbjct: 416 SATPKNPIPRKFAIRPQPGTKVRRLTKDAGTLGCKPGKSC 455
>TAIR|locus:2012562 [details] [associations]
symbol:AT59 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0016829 "lyase
activity" evidence=ISS] [GO:0030570 "pectate lyase activity"
evidence=IEA;ISS] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=TAS] InterPro:IPR007524 Pfam:PF04431 UniPathway:UPA00545
INTERPRO:IPR002022 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0045490 Gene3D:2.160.20.10 InterPro:IPR012334
InterPro:IPR011050 SUPFAM:SSF51126 EMBL:AC012188 GO:GO:0009664
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 EMBL:U83619 EMBL:BT010451 IPI:IPI00541066 PIR:G86278
RefSeq:NP_172894.1 UniGene:At.41974 ProteinModelPortal:Q9M9S2
SMR:Q9M9S2 STRING:Q9M9S2 EnsemblPlants:AT1G14420.1 GeneID:838004
KEGG:ath:AT1G14420 TAIR:At1g14420 InParanoid:Q9M9S2 OMA:VNNVIIH
PhylomeDB:Q9M9S2 ProtClustDB:CLSN2682943 Genevestigator:Q9M9S2
GermOnline:AT1G14420 Uniprot:Q9M9S2
Length = 459
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 143/280 (51%), Positives = 186/280 (66%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I+L++EL++ S KTIDGRGA V+I G +T+Q+V N+IIH + + G ++RD
Sbjct: 180 MIIKLQQELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRD 239
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
S H G RT SDGDG+S+FG T+IW+DH S++ C DG++DAI GSTA+TISN+ T H +
Sbjct: 240 SEAHIGLRTKSDGDGISLFGATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHFTDHQE 299
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VML G D + DK MQ+T+AFNHFG+ L QR+PRCR+G HVVNNDYTHWEMYAIGG+
Sbjct: 300 VMLFGARDEHVIDKKMQITVAFNHFGKRLEQRMPRCRYGTIHVVNNDYTHWEMYAIGGNM 359
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGAFFTXXXXXXXX 240
NPTI SQGNRF AP +K++TK E P EW++WNW+SEGD +NGA+F
Sbjct: 360 NPTIISQGNRFIAPPNEEAKQITKREYTPYGEWKSWNWQSEGDYFLNGAYFVQSGKANAW 419
Query: 241 XXXXXX------XXXXRPSALVGPITGSAGALICKKGARC 274
+P +V +T AG L CK G C
Sbjct: 420 SSKPKTPLPNKFTIRPKPGTMVRKLTMDAGVLGCKLGEAC 459
>TAIR|locus:2204232 [details] [associations]
symbol:AT1G30350 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
UniPathway:UPA00545 INTERPRO:IPR002022 EMBL:CP002684 GO:GO:0046872
EMBL:AC025295 GO:GO:0045490 Gene3D:2.160.20.10 InterPro:IPR012334
InterPro:IPR011050 SUPFAM:SSF51126 Pfam:PF00544 SMART:SM00656
CAZy:PL1 eggNOG:COG3866 KO:K01728 GO:GO:0030570 InterPro:IPR018082
PRINTS:PR00807 EMBL:DQ446309 IPI:IPI00543154 PIR:G86427
RefSeq:NP_174324.1 UniGene:At.51837 ProteinModelPortal:Q9C8G4
SMR:Q9C8G4 STRING:Q9C8G4 PaxDb:Q9C8G4 PRIDE:Q9C8G4
EnsemblPlants:AT1G30350.1 GeneID:839915 KEGG:ath:AT1G30350
TAIR:At1g30350 InParanoid:Q9C8G4 OMA:TIAFNTF PhylomeDB:Q9C8G4
ProtClustDB:CLSN2914504 ArrayExpress:Q9C8G4 Genevestigator:Q9C8G4
Uniprot:Q9C8G4
Length = 368
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 141/275 (51%), Positives = 176/275 (64%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I LK +L++NS+KTIDGRGA V IA GPC+ I+ V ++IIHG++IHDCK N M
Sbjct: 110 MVIVLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGM--- 166
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
DGDG+ +F TH+W+DHC LS C DGL+D I STA+TISNN+ T HDK
Sbjct: 167 -----------DGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDK 215
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGH D+Y DK+M+VTIAFN FG GL++R+PR R GY HV NN Y W+MYAIGGSA
Sbjct: 216 VMLLGHDDSYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSA 275
Query: 181 NPTINSQGNRFAAPDRAFSKEVTKHEDA-PESEWRNWNWRSEGDLMVNGAFFTXXXXXXX 239
NP I S+GN F AP++ SK+VTK A P+S + W W + D+ +NGAFF
Sbjct: 276 NPIIFSEGNYFVAPEKRSSKQVTKRMMAGPDS--KRWKWGTSRDVFMNGAFFGPPGVIVR 333
Query: 240 XXXXXXXXXXXRPSALVGPITGSAGALICKKGARC 274
+LV +T SAG L C G C
Sbjct: 334 PLYKGGEGFRVAHGSLVPSLTSSAGPLRCYVGRIC 368
>TAIR|locus:2184797 [details] [associations]
symbol:AT5G09280 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016829 "lyase activity"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
INTERPRO:IPR002022 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AL391712 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 InterPro:IPR018082 PRINTS:PR00807
IPI:IPI00543290 RefSeq:NP_196490.1 UniGene:At.66794
ProteinModelPortal:Q9FY87 SMR:Q9FY87 STRING:Q9FY87 PRIDE:Q9FY87
EnsemblPlants:AT5G09280.1 GeneID:830787 KEGG:ath:AT5G09280
TAIR:At5g09280 InParanoid:Q9FY87 OMA:SNNWFRN PhylomeDB:Q9FY87
ProtClustDB:CLSN2916869 Genevestigator:Q9FY87 Uniprot:Q9FY87
Length = 297
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 100/206 (48%), Positives = 134/206 (65%)
Query: 1 MTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRD 60
M I+L + L+++SF +DGRGASVHI+G C+ + T++IIHGL IHDCK + V
Sbjct: 48 MKIKLHKPLLISSFTALDGRGASVHISGPACLIVYRATDVIIHGLKIHDCKAHPPSSVMG 107
Query: 61 SPRHFGWRTVSDGDGVSIFGGTHIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDK 120
DGD + + +W+DH +L +C+DGL+D GST +T+SNN+ + DK
Sbjct: 108 PDSKIIQLGHMDGDAIRLVTAKKVWIDHNTLYDCEDGLLDVTLGSTDVTVSNNWFRNQDK 167
Query: 121 VMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSA 180
VMLLGH D Y +DK+M+VT+ FNHFG QR+PR RHGY HV NN Y W YAIGGS
Sbjct: 168 VMLLGHDDGYVKDKDMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNYYQGWTQYAIGGSM 227
Query: 181 NPTINSQGNRFAAPDRAFSKEVT-KH 205
+P + S+ N F AP ++ SKEV KH
Sbjct: 228 SPRVKSESNYFVAP-KSGSKEVLEKH 252
>TAIR|locus:2100651 [details] [associations]
symbol:AT3G55140 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016829 "lyase
activity" evidence=ISS] [GO:0030570 "pectate lyase activity"
evidence=ISS] INTERPRO:IPR002022 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.160.20.10 InterPro:IPR012334
InterPro:IPR011050 SUPFAM:SSF51126 GO:GO:0016829 Pfam:PF00544
SMART:SM00656 KO:K01728 InterPro:IPR018082 PRINTS:PR00807
EMBL:BT033077 EMBL:BT033083 IPI:IPI00531252 RefSeq:NP_191074.2
UniGene:At.35049 ProteinModelPortal:B3LF89 SMR:B3LF89 PRIDE:B3LF89
EnsemblPlants:AT3G55140.1 GeneID:824680 KEGG:ath:AT3G55140
TAIR:At3g55140 OMA:FEGGRGH Genevestigator:Q3E7I1 Uniprot:B3LF89
Length = 331
Score = 272 (100.8 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 63/160 (39%), Positives = 90/160 (56%)
Query: 72 DGDGVSIFGGT-HIWVDHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDKVMLLGHSDTY 130
D DG+ I + HIW+D CSL + DDGL+D ST IT+S + HDK ML+G ++
Sbjct: 119 DVDGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPSH 178
Query: 131 TQDKNMQVTIAFNH-FGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGN 189
+D+ ++VTI +H F +G QR PR R G H+ NN +W +YA+ S + SQ N
Sbjct: 179 VEDRCIRVTI--HHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVEAQVFSQCN 236
Query: 190 RFAAPDRAFSKEVTKHEDAPESEWRNWNWRSEGDLMVNGA 229
+ A + + E + A + E R RSE DL +NGA
Sbjct: 237 IYEAGVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGA 276
Score = 70 (29.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 2 TIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGL 45
TI L L ++S+KTIDGRG + + G I ++ +III L
Sbjct: 68 TINLNSYLSVSSYKTIDGRGQRIKLTGKG-IRLKECEHIIICNL 110
>TAIR|locus:2074999 [details] [associations]
symbol:AT3G09540 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016829 "lyase
activity" evidence=ISS] [GO:0030570 "pectate lyase activity"
evidence=ISS] INTERPRO:IPR002022 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AC016661 Gene3D:2.160.20.10
InterPro:IPR012334 InterPro:IPR011050 SUPFAM:SSF51126 GO:GO:0016829
Pfam:PF00544 SMART:SM00656 CAZy:PL1 eggNOG:COG3866
HOGENOM:HOG000237948 KO:K01728 InterPro:IPR018082 PRINTS:PR00807
EMBL:BT029552 EMBL:AK230462 IPI:IPI00543241 RefSeq:NP_187565.1
UniGene:At.40087 ProteinModelPortal:Q9SF49 SMR:Q9SF49 STRING:Q9SF49
PaxDb:Q9SF49 PRIDE:Q9SF49 EnsemblPlants:AT3G09540.1 GeneID:820111
KEGG:ath:AT3G09540 TAIR:At3g09540 InParanoid:Q9SF49 OMA:CALEVEG
PhylomeDB:Q9SF49 ProtClustDB:CLSN2685145 Genevestigator:Q9SF49
Uniprot:Q9SF49
Length = 378
Score = 269 (99.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 70/191 (36%), Positives = 103/191 (53%)
Query: 44 GLNIHDCKKGGNAMVRDSPRHFGWRTVSDGDGVSIFGGTH-IWVDHCSLSNCDDGLVDAI 102
GL + +C+ N ++ + F D D + I +H IW+D CSL N DGL+D
Sbjct: 143 GLRLKECE---NVIICNL--EFEGGVGPDADAIQIKPKSHNIWIDRCSLKNYYDGLIDIT 197
Query: 103 HGSTAITISNNFMTHHDKVMLLGHSDTYTQDKNMQVTIAFNH-FGEGLVQRIPRCRHGYF 161
ST IT+S +H+K ML+G ++ D+ ++VTI +H F +G QR PR R
Sbjct: 198 RESTDITVSRCHFMNHNKTMLIGADTSHVTDRCIRVTI--HHCFFDGTRQRHPRVRFAKV 255
Query: 162 HVVNNDYTHWEMYAIGGSANPTINSQGNRFAAPDRAFSKEVTKH--EDAPESEWRNWNW- 218
H+ NN HW +YA+G I+SQ N + A ++ K V K+ E A + E +
Sbjct: 256 HLFNNYTRHWAIYAVGAGVESQIHSQCNIYEAGEK---KTVFKYITEKAADKEKPGAGFV 312
Query: 219 RSEGDLMVNGA 229
RSEGDL++NGA
Sbjct: 313 RSEGDLLLNGA 323
Score = 60 (26.2 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 2 TIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGL 45
TI L + ++S T+DGRG V I G + ++ N+II L
Sbjct: 115 TINLSSFVNVSSHTTVDGRGQKVKITGKG-LRLKECENVIICNL 157
>UNIPROTKB|A2QV36 [details] [associations]
symbol:plyA "Probable pectate lyase A" species:425011
"Aspergillus niger CBS 513.88" [GO:0005576 "extracellular region"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
[GO:0045490 "pectin catabolic process" evidence=ISS]
INTERPRO:IPR002022 GO:GO:0005576 GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 Pfam:PF00544 SMART:SM00656 CAZy:PL1 KO:K01728
GO:GO:0030570 HOGENOM:HOG000216909 OrthoDB:EOG4WT0KG EMBL:AM270216
RefSeq:XP_001402478.1 ProteinModelPortal:A2QV36
EnsemblFungi:CADANGAT00008313 GeneID:4990338
GenomeReviews:AM270989_GR KEGG:ang:ANI_1_102174 Uniprot:A2QV36
Length = 323
Score = 179 (68.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 39 NIIIHGLNIHDCKKGGNAMVRDSPRHFGWRTVSD-GDGVSIFGGTHIWVDHCSLSNC-D- 95
N I+ G + K+ N ++R+ + ++D GD + + ++W+DHC +S+ D
Sbjct: 104 NAILEGFGVL-VKEKENVIIRNLGVS---KVLADNGDAIGVQYSNNVWIDHCDVSSDRDH 159
Query: 96 -----DGLVDAIHGSTAITISNNFMTHHDKVMLLGHSDTYTQDKNMQVTIAF-NHFGEGL 149
DGL+D HGS +T+SN F+ H K L+GHSD+ + + +T+ + N++ +
Sbjct: 160 DKDYYDGLIDITHGSDYVTVSNTFIHDHWKASLVGHSDSNEDEDSGHLTVTYANNYWYNI 219
Query: 150 VQRIPRCRHGYFHVVNNDY 168
R P R G HV N+ Y
Sbjct: 220 NSRAPSFRFGTGHVYNSYY 238
>UNIPROTKB|Q9C2Z0 [details] [associations]
symbol:plyA "Pectate lyase A" species:5061 "Aspergillus
niger" [GO:0005576 "extracellular region" evidence=ISS;IDA]
[GO:0030570 "pectate lyase activity" evidence=ISS;IDA] [GO:0045490
"pectin catabolic process" evidence=ISS;IDA] INTERPRO:IPR002022
GO:GO:0005576 GO:GO:0046872 GO:GO:0045490 Gene3D:2.160.20.10
InterPro:IPR012334 InterPro:IPR011050 SUPFAM:SSF51126 Pfam:PF00544
SMART:SM00656 CAZy:PL1 eggNOG:COG3866 GO:GO:0030570 EMBL:AJ276331
HSSP:P29155 ProteinModelPortal:Q9C2Z0 STRING:Q9C2Z0 Uniprot:Q9C2Z0
Length = 323
Score = 178 (67.7 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 39 NIIIHGLNIHDCKKGGNAMVRDSPRHFGWRTVSD-GDGVSIFGGTHIWVDHCSLSNC-D- 95
N I+ G + K+ N ++R+ + ++D GD + + ++W+DHC +S+ D
Sbjct: 104 NAILEGFGVL-VKEKENVIIRNLGVS---KVLADNGDAIGVQYSNNVWIDHCDVSSDRDH 159
Query: 96 -----DGLVDAIHGSTAITISNNFMTHHDKVMLLGHSDTYTQDKNMQVTIAF-NHFGEGL 149
DGL+D HGS +T+SN F+ H K L+GHSD+ + + +T+ + N++ +
Sbjct: 160 DKDYYDGLIDITHGSDYVTVSNTFIHDHWKASLVGHSDSNEDEDSGHLTVTYANNYWYNV 219
Query: 150 VQRIPRCRHGYFHVVNNDY 168
R P R G HV N+ Y
Sbjct: 220 NSRAPSFRFGTGHVYNSYY 238
>ASPGD|ASPL0000059153 [details] [associations]
symbol:pelA species:162425 "Emericella nidulans"
[GO:0030570 "pectate lyase activity" evidence=ISS;IDA] [GO:0045490
"pectin catabolic process" evidence=ISS;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0070051 "fibrinogen binding"
evidence=IEA] UniPathway:UPA00545 INTERPRO:IPR002022 GO:GO:0005576
EMBL:BN001308 GO:GO:0046872 GO:GO:0045490 Gene3D:2.160.20.10
InterPro:IPR012334 InterPro:IPR011050 SUPFAM:SSF51126
EMBL:AACD01000012 Pfam:PF00544 SMART:SM00656 CAZy:PL1
eggNOG:COG3866 KO:K01728 GO:GO:0030570 HOGENOM:HOG000216909
OrthoDB:EOG4WT0KG EMBL:U05592 EMBL:DQ490468 RefSeq:XP_658345.1
ProteinModelPortal:Q00645 mycoCLAP:PLY1B_EMENI
EnsemblFungi:CADANIAT00001924 GeneID:2876513 KEGG:ani:AN0741.2
OMA:GYCTQNG BRENDA:4.2.2.2 Uniprot:Q00645
Length = 326
Score = 172 (65.6 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 45/136 (33%), Positives = 67/136 (49%)
Query: 72 DGDGVSIFGGTHIWVDHCSLSNC-----DD--GLVDAIHGSTAITISNNFMTHHDKVMLL 124
+GD + I +++WVDHC LS DD GLVD HG+ IT+SN + H K L+
Sbjct: 131 NGDAIGIDASSNVWVDHCDLSGDLSGGKDDLDGLVDISHGAEWITVSNTYFHDHWKGSLI 190
Query: 125 GHSDTYTQDK--NMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSANP 182
GHSD + ++ VT A N++ + R P R H++NN + + +
Sbjct: 191 GHSDNNEDEDLGHLHVTYA-NNYWYNVYSRTPLIRFATVHIINNYWDSLIDTGVNCRMDA 249
Query: 183 TINSQGNRFA-APDRA 197
+ Q + F PDRA
Sbjct: 250 QVLIQSSAFHNCPDRA 265
>UNIPROTKB|Q00645 [details] [associations]
symbol:plyB "Pectate lyase plyB" species:227321
"Aspergillus nidulans FGSC A4" [GO:0030570 "pectate lyase activity"
evidence=IDA] [GO:0045490 "pectin catabolic process" evidence=IDA]
UniPathway:UPA00545 INTERPRO:IPR002022 GO:GO:0005576 EMBL:BN001308
GO:GO:0046872 GO:GO:0045490 Gene3D:2.160.20.10 InterPro:IPR012334
InterPro:IPR011050 SUPFAM:SSF51126 EMBL:AACD01000012 Pfam:PF00544
SMART:SM00656 CAZy:PL1 eggNOG:COG3866 KO:K01728 GO:GO:0030570
HOGENOM:HOG000216909 OrthoDB:EOG4WT0KG EMBL:U05592 EMBL:DQ490468
RefSeq:XP_658345.1 ProteinModelPortal:Q00645 mycoCLAP:PLY1B_EMENI
EnsemblFungi:CADANIAT00001924 GeneID:2876513 KEGG:ani:AN0741.2
OMA:GYCTQNG BRENDA:4.2.2.2 Uniprot:Q00645
Length = 326
Score = 172 (65.6 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 45/136 (33%), Positives = 67/136 (49%)
Query: 72 DGDGVSIFGGTHIWVDHCSLSNC-----DD--GLVDAIHGSTAITISNNFMTHHDKVMLL 124
+GD + I +++WVDHC LS DD GLVD HG+ IT+SN + H K L+
Sbjct: 131 NGDAIGIDASSNVWVDHCDLSGDLSGGKDDLDGLVDISHGAEWITVSNTYFHDHWKGSLI 190
Query: 125 GHSDTYTQDK--NMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSANP 182
GHSD + ++ VT A N++ + R P R H++NN + + +
Sbjct: 191 GHSDNNEDEDLGHLHVTYA-NNYWYNVYSRTPLIRFATVHIINNYWDSLIDTGVNCRMDA 249
Query: 183 TINSQGNRFA-APDRA 197
+ Q + F PDRA
Sbjct: 250 QVLIQSSAFHNCPDRA 265
>UNIPROTKB|B8NE46 [details] [associations]
symbol:plyA "Probable pectate lyase A" species:332952
"Aspergillus flavus NRRL3357" [GO:0005576 "extracellular region"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
[GO:0045490 "pectin catabolic process" evidence=ISS]
INTERPRO:IPR002022 GO:GO:0005576 GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 Pfam:PF00544 SMART:SM00656 eggNOG:COG3866 KO:K01728
GO:GO:0030570 HOGENOM:HOG000216909 EMBL:EQ963477
RefSeq:XP_002378521.1 ProteinModelPortal:B8NE46
EnsemblFungi:CADAFLAT00006386 GeneID:7915768 KEGG:afv:AFLA_057770
Uniprot:B8NE46
Length = 321
Score = 169 (64.5 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 44/141 (31%), Positives = 74/141 (52%)
Query: 39 NIIIHGLNIHDCKKGGNAMVRDSPRHFGWRTV--SDGDGVSIFGGTHIWVDHCSLSNC-D 95
N I+ G + K+ N ++R+ G + V +GD + + ++W+DHC +S+ D
Sbjct: 102 NAILEGFGLL-VKEKENVIIRN----LGVKKVLADNGDAIGVQYSNNVWIDHCDVSSDRD 156
Query: 96 ------DGLVDAIHGSTAITISNNFMTHHDKVMLLGHSDTYTQDK--NMQVTIAFNHFGE 147
DGL+D H + +T+SN F+ H K ML GHSD+ + ++++T+ N++
Sbjct: 157 HDKDYYDGLIDLTHAADYVTVSNTFVHDHWKAMLFGHSDSNGDEDTGHLRITVN-NNYLN 215
Query: 148 GLVQRIPRCRHGYFHVVNNDY 168
L R P R G H+ NN Y
Sbjct: 216 NLNSRGPSFRFGTGHLYNNYY 236
>UNIPROTKB|Q2U8R6 [details] [associations]
symbol:plyA "Probable pectate lyase A" species:510516
"Aspergillus oryzae RIB40" [GO:0005576 "extracellular region"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
[GO:0045490 "pectin catabolic process" evidence=ISS]
INTERPRO:IPR002022 GO:GO:0005576 GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 Pfam:PF00544 SMART:SM00656 eggNOG:COG3866 KO:K01728
GO:GO:0030570 HOGENOM:HOG000216909 OrthoDB:EOG4WT0KG EMBL:AP007164
RefSeq:XP_001823182.1 ProteinModelPortal:Q2U8R6
EnsemblFungi:CADAORAT00010667 GeneID:5995239
GenomeReviews:AP007164_GR KEGG:aor:AOR_1_590114 Uniprot:Q2U8R6
Length = 321
Score = 169 (64.5 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 44/141 (31%), Positives = 74/141 (52%)
Query: 39 NIIIHGLNIHDCKKGGNAMVRDSPRHFGWRTV--SDGDGVSIFGGTHIWVDHCSLSNC-D 95
N I+ G + K+ N ++R+ G + V +GD + + ++W+DHC +S+ D
Sbjct: 102 NAILEGFGLL-VKEKENVIIRN----LGVKKVLADNGDAIGVQYSNNVWIDHCDVSSDRD 156
Query: 96 ------DGLVDAIHGSTAITISNNFMTHHDKVMLLGHSDTYTQDK--NMQVTIAFNHFGE 147
DGL+D H + +T+SN F+ H K ML GHSD+ + ++++T+ N++
Sbjct: 157 HDKDYYDGLIDLTHAADYVTVSNTFVHDHWKAMLFGHSDSNGDEDTGHLRITVN-NNYLN 215
Query: 148 GLVQRIPRCRHGYFHVVNNDY 168
L R P R G H+ NN Y
Sbjct: 216 NLNSRGPSFRFGTGHLYNNYY 236
>UNIPROTKB|B0XT32 [details] [associations]
symbol:plyA "Probable pectate lyase A" species:451804
"Aspergillus fumigatus A1163" [GO:0005576 "extracellular region"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
[GO:0045490 "pectin catabolic process" evidence=ISS]
INTERPRO:IPR002022 GO:GO:0005576 GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 Pfam:PF00544 SMART:SM00656 EMBL:DS499595
GO:GO:0030570 ProteinModelPortal:B0XT32 Allergome:8991
EnsemblFungi:CADAFUBT00001779 HOGENOM:HOG000216909 Uniprot:B0XT32
Length = 321
Score = 159 (61.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/146 (30%), Positives = 73/146 (50%)
Query: 63 RHFGWRTV--SDGDGVSIFGGTHIWVDHCSLSNC-D------DGLVDAIHGSTAITISNN 113
R+ G + V +GD + I ++WVDH +S+ D DGL+D H + +TISN+
Sbjct: 121 RNLGVKKVLAENGDAIGIQYSNNVWVDHVDVSSDRDHDKDYYDGLIDVTHAADYVTISNS 180
Query: 114 FMTHHDKVMLLGHSDTY-TQDK-NMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHW 171
++ H K L+GHSD +DK +++VT A N++ + R P R G H+ N+ Y
Sbjct: 181 YIHDHWKASLVGHSDNNGDEDKGHLRVTYA-NNYWSNINSRAPSLRFGTGHIYNS-YFEN 238
Query: 172 EMYAIGGSANPTINSQGNRFAAPDRA 197
I + + N+F +A
Sbjct: 239 VSDGINTRDGAQVLVESNQFVGSSKA 264
>UNIPROTKB|Q4WIT0 [details] [associations]
symbol:plyA "Probable pectate lyase A" species:330879
"Aspergillus fumigatus Af293" [GO:0005576 "extracellular region"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
[GO:0045490 "pectin catabolic process" evidence=ISS]
INTERPRO:IPR002022 GO:GO:0005576 GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 EMBL:AAHF01000008 GenomeReviews:CM000170_GR
Pfam:PF00544 SMART:SM00656 eggNOG:COG3866 KO:K01728 GO:GO:0030570
Allergome:8991 HOGENOM:HOG000216909 RefSeq:XP_749213.1
ProteinModelPortal:Q4WIT0 STRING:Q4WIT0
EnsemblFungi:CADAFUAT00003735 GeneID:3507249 KEGG:afm:AFUA_2G00760
OMA:SDRDHDK OrthoDB:EOG4WT0KG Uniprot:Q4WIT0
Length = 321
Score = 159 (61.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 45/146 (30%), Positives = 73/146 (50%)
Query: 63 RHFGWRTV--SDGDGVSIFGGTHIWVDHCSLSNC-D------DGLVDAIHGSTAITISNN 113
R+ G + V +GD + I ++WVDH +S+ D DGL+D H + +TISN+
Sbjct: 121 RNLGVKKVLAENGDAIGIQYSNNVWVDHVDVSSDRDHDKDYYDGLIDVTHAADYVTISNS 180
Query: 114 FMTHHDKVMLLGHSDTY-TQDK-NMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHW 171
++ H K L+GHSD +DK +++VT A N++ + R P R G H+ N+ Y
Sbjct: 181 YIHDHWKASLVGHSDNNGDEDKGHLRVTYA-NNYWSNINSRAPSLRFGTGHIYNS-YFEN 238
Query: 172 EMYAIGGSANPTINSQGNRFAAPDRA 197
I + + N+F +A
Sbjct: 239 VSDGINTRDGAQVLVESNQFVGSSKA 264
>UNIPROTKB|A1CYB8 [details] [associations]
symbol:plyA "Probable pectate lyase A" species:331117
"Neosartorya fischeri NRRL 181" [GO:0005576 "extracellular region"
evidence=ISS] [GO:0030570 "pectate lyase activity" evidence=ISS]
[GO:0045490 "pectin catabolic process" evidence=ISS]
INTERPRO:IPR002022 GO:GO:0005576 GO:GO:0046872 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 EMBL:DS027686 Pfam:PF00544 SMART:SM00656
eggNOG:COG3866 KO:K01728 GO:GO:0030570 HOGENOM:HOG000216909
OrthoDB:EOG4WT0KG RefSeq:XP_001265635.1 ProteinModelPortal:A1CYB8
EnsemblFungi:CADNFIAT00003568 GeneID:4592853 KEGG:nfi:NFIA_033040
Uniprot:A1CYB8
Length = 321
Score = 149 (57.5 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 63 RHFGWRTV--SDGDGVSIFGGTHIWVDHCSLSNC-D------DGLVDAIHGSTAITISNN 113
R+ G + V +GD + I ++WVDH +S+ D DGL+D H + +TISN
Sbjct: 121 RNLGVKKVLAENGDAIGIQYSNNVWVDHVDVSSDRDHDKDYYDGLIDLTHAADYVTISNC 180
Query: 114 FMTHHDKVMLLGHSDTYTQDK--NMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHW 171
++ H K L+GHSD + +++VT A N++ + R P R G HV N+ Y
Sbjct: 181 YIHDHWKASLVGHSDNNGDEDTGHLRVTYA-NNYWSNINSRAPSLRFGTGHVYNS-YFEN 238
Query: 172 EMYAIGGSANPTINSQGNRFAAPDRA 197
I + + N+F +A
Sbjct: 239 VSDGINTRDGAQVLVESNQFVGSSKA 264
>ASPGD|ASPL0000066968 [details] [associations]
symbol:plyA species:162425 "Emericella nidulans"
[GO:0030570 "pectate lyase activity" evidence=IDA] [GO:0045490
"pectin catabolic process" evidence=IDA] [GO:0070051 "fibrinogen
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR002022 GO:GO:0005576 GO:GO:0046872
GO:GO:0045490 EMBL:BN001304 Gene3D:2.160.20.10 InterPro:IPR012334
InterPro:IPR011050 SUPFAM:SSF51126 EMBL:AACD01000130 Pfam:PF00544
SMART:SM00656 CAZy:PL1 eggNOG:COG3866 KO:K01728 GO:GO:0030570
HOGENOM:HOG000216909 OMA:SDRDHDK OrthoDB:EOG4WT0KG EMBL:DQ490513
RefSeq:XP_680915.1 ProteinModelPortal:Q5AVN4 mycoCLAP:PLY1A_EMENI
EnsemblFungi:CADANIAT00000764 GeneID:2869602 KEGG:ani:AN7646.2
Uniprot:Q5AVN4
Length = 327
Score = 147 (56.8 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 72 DGDGVSIFGGTHIWVDHCSLSNC-D------DGLVDAIHGSTAITISNNFMTHHDKVMLL 124
+GD + +IW+DH +S+ D DGL+D GS IT+SN+F+ H K L+
Sbjct: 138 NGDAIGAEYSNNIWIDHVDVSSDRDHDKDYYDGLLDFKRGSDYITVSNSFIHDHWKASLV 197
Query: 125 GHSDTYTQDKNMQVTIAF-NHFGEGLVQRIPRCRHGYFHVVNNDY 168
GHS++ + + ++ + + N++ L R P R G H+ NN Y
Sbjct: 198 GHSNSNEDEDSGKLHVTYANNYWYNLNSRAPSIRFGTGHIYNNYY 242
>UNIPROTKB|Q5AVN4 [details] [associations]
symbol:plyA "Pectate lyase A" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0005576 "extracellular region" evidence=ISS]
[GO:0030570 "pectate lyase activity" evidence=IDA] [GO:0045490
"pectin catabolic process" evidence=IDA] INTERPRO:IPR002022
GO:GO:0005576 GO:GO:0046872 GO:GO:0045490 EMBL:BN001304
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 EMBL:AACD01000130 Pfam:PF00544 SMART:SM00656
CAZy:PL1 eggNOG:COG3866 KO:K01728 GO:GO:0030570
HOGENOM:HOG000216909 OMA:SDRDHDK OrthoDB:EOG4WT0KG EMBL:DQ490513
RefSeq:XP_680915.1 ProteinModelPortal:Q5AVN4 mycoCLAP:PLY1A_EMENI
EnsemblFungi:CADANIAT00000764 GeneID:2869602 KEGG:ani:AN7646.2
Uniprot:Q5AVN4
Length = 327
Score = 147 (56.8 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 72 DGDGVSIFGGTHIWVDHCSLSNC-D------DGLVDAIHGSTAITISNNFMTHHDKVMLL 124
+GD + +IW+DH +S+ D DGL+D GS IT+SN+F+ H K L+
Sbjct: 138 NGDAIGAEYSNNIWIDHVDVSSDRDHDKDYYDGLLDFKRGSDYITVSNSFIHDHWKASLV 197
Query: 125 GHSDTYTQDKNMQVTIAF-NHFGEGLVQRIPRCRHGYFHVVNNDY 168
GHS++ + + ++ + + N++ L R P R G H+ NN Y
Sbjct: 198 GHSNSNEDEDSGKLHVTYANNYWYNLNSRAPSIRFGTGHIYNNYY 242
>UNIPROTKB|B8NVB7 [details] [associations]
symbol:pelD "Probable pectin lyase D" species:332952
"Aspergillus flavus NRRL3357" [GO:0045490 "pectin catabolic
process" evidence=ISS] [GO:0047490 "pectin lyase activity"
evidence=ISS] INTERPRO:IPR002022 GO:GO:0005576 GO:GO:0045490
Gene3D:2.160.20.10 InterPro:IPR012334 InterPro:IPR011050
SUPFAM:SSF51126 HOGENOM:HOG000175137 GO:GO:0047490 Pfam:PF00544
SMART:SM00656 EMBL:EQ963485 RefSeq:XP_002384311.1
ProteinModelPortal:B8NVB7 SMR:B8NVB7 EnsemblFungi:CADAFLAT00012176
GeneID:7918018 KEGG:afv:AFLA_116040 eggNOG:NOG127861 Uniprot:B8NVB7
Length = 375
Score = 111 (44.1 bits), Expect = 0.00090, P = 0.00090
Identities = 44/190 (23%), Positives = 80/190 (42%)
Query: 9 LIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRDSPRHFGWR 68
+ +NS K++ G G I G + V N+II + + D +P++ W
Sbjct: 123 ITVNSNKSLIGEGTKGVIKGKGLRIVNGVENVIIQNIAVTDI----------NPKYV-W- 170
Query: 69 TVSDGDGVSIFGGTHIWVDHCSLSNCD-DGLVDAIHGSTAITISNNFMTHHDKVMLL--G 125
GD ++I +W+DH + + V +T+SNN++ G
Sbjct: 171 ---GGDAITINQADLVWIDHVTTARIGRQHYVLGTEADNRVTLSNNYIDGESDYSATCDG 227
Query: 126 HS--DTYTQDKNMQVTIAFNHFGEGLVQRIPRCR-HGYFHVVNNDYTHWEMYAIGGSANP 182
H + Y + +VT+ N+F + R P+ + + Y H VNN + +A +
Sbjct: 228 HHYWNVYLDGSSDKVTMKGNYFYK-TSGRAPKVQGNTYLHAVNNYWNDNSNHAFEIGSGG 286
Query: 183 TINSQGNRFA 192
+ ++GN FA
Sbjct: 287 YVLAEGNTFA 296
>UNIPROTKB|Q2TXS4 [details] [associations]
symbol:pel2 "Pectin lyase 2" species:510516 "Aspergillus
oryzae RIB40" [GO:0045490 "pectin catabolic process" evidence=IDA]
[GO:0047490 "pectin lyase activity" evidence=IDA]
INTERPRO:IPR002022 GO:GO:0005576 GO:GO:0045490 Gene3D:2.160.20.10
InterPro:IPR012334 InterPro:IPR011050 SUPFAM:SSF51126
HOGENOM:HOG000175137 GO:GO:0047490 Pfam:PF00544 SMART:SM00656
CAZy:PL1 EMBL:AP007175 GenomeReviews:AP007175_GR eggNOG:NOG127861
OrthoDB:EOG4FXVH8 EMBL:AB029323 RefSeq:XP_001827082.1 HSSP:Q01172
ProteinModelPortal:Q2TXS4 SMR:Q2TXS4 EnsemblFungi:CADAORAT00004149
GeneID:5999216 KEGG:aor:AOR_1_38024 Uniprot:Q2TXS4
Length = 375
Score = 111 (44.1 bits), Expect = 0.00090, P = 0.00090
Identities = 44/190 (23%), Positives = 80/190 (42%)
Query: 9 LIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRDSPRHFGWR 68
+ +NS K++ G G I G + V N+II + + D +P++ W
Sbjct: 123 ITVNSNKSLIGEGTKGVIKGKGLRIVNGVENVIIQNIAVTDI----------NPKYV-W- 170
Query: 69 TVSDGDGVSIFGGTHIWVDHCSLSNCD-DGLVDAIHGSTAITISNNFMTHHDKVMLL--G 125
GD ++I +W+DH + + V +T+SNN++ G
Sbjct: 171 ---GGDAITINQADLVWIDHVTTARIGRQHYVLGTEADNRVTLSNNYIDGESDYSATCDG 227
Query: 126 HS--DTYTQDKNMQVTIAFNHFGEGLVQRIPRCR-HGYFHVVNNDYTHWEMYAIGGSANP 182
H + Y + +VT+ N+F + R P+ + + Y H VNN + +A +
Sbjct: 228 HHYWNVYLDGSSDKVTMKGNYFYK-TSGRAPKVQGNTYLHAVNNYWNDNSNHAFEIGSGG 286
Query: 183 TINSQGNRFA 192
+ ++GN FA
Sbjct: 287 YVLAEGNTFA 296
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.443 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 274 256 0.00086 114 3 11 22 0.44 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 618 (66 KB)
Total size of DFA: 236 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.37u 0.13s 20.50t Elapsed: 00:00:01
Total cpu time: 20.37u 0.13s 20.50t Elapsed: 00:00:01
Start: Sat May 11 06:12:31 2013 End: Sat May 11 06:12:32 2013