Query 023997
Match_columns 274
No_of_seqs 361 out of 1500
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 08:10:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023997.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023997hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15197 secreted effector pro 99.7 2.2E-18 4.8E-23 158.7 2.9 109 100-208 156-265 (291)
2 PRK15197 secreted effector pro 99.7 3.9E-18 8.4E-23 157.1 3.7 109 100-208 161-270 (291)
3 PRK15196 secreted effector pro 99.6 7.6E-17 1.6E-21 152.5 3.2 7 33-39 103-109 (350)
4 PRK15196 secreted effector pro 99.6 2.1E-16 4.6E-21 149.5 4.1 40 100-139 189-228 (350)
5 PRK15377 E3 ubiquitin-protein 99.6 4E-16 8.7E-21 157.1 5.2 105 100-204 187-294 (782)
6 PRK15377 E3 ubiquitin-protein 99.6 8.4E-16 1.8E-20 154.8 4.6 108 99-206 191-307 (782)
7 PRK09718 hypothetical protein; 99.5 3.5E-15 7.6E-20 144.0 5.4 105 100-204 97-206 (512)
8 KOG1665 AFH1-interacting prote 99.5 1E-15 2.2E-20 134.9 1.0 39 100-138 138-176 (302)
9 KOG1665 AFH1-interacting prote 99.5 1.8E-15 3.8E-20 133.3 1.9 45 101-145 134-178 (302)
10 PLN00077 photosystem II reacti 31.5 74 0.0016 25.9 3.8 28 17-44 15-43 (128)
11 PF12541 DUF3737: Protein of u 30.8 39 0.00083 31.3 2.4 15 218-232 244-258 (277)
12 PF01696 Adeno_E1B_55K: Adenov 29.0 59 0.0013 31.7 3.4 34 105-138 120-157 (386)
13 PRK09716 hypothetical protein; 23.6 42 0.00091 30.7 1.3 19 104-122 152-170 (395)
14 PF07123 PsbW: Photosystem II 23.5 1.3E+02 0.0028 25.1 4.0 22 23-44 31-52 (138)
15 PLN00019 photosystem I reactio 20.4 1.7E+02 0.0036 26.3 4.3 11 31-41 23-33 (223)
No 1
>PRK15197 secreted effector protein PipB; Provisional
Probab=99.71 E-value=2.2e-18 Score=158.69 Aligned_cols=109 Identities=20% Similarity=0.250 Sum_probs=56.0
Q ss_pred CCCceecCccccCccccCceecCceeccceecCceecCccccccccccceeecceecccccccccccceeecceeeccce
Q 023997 100 GSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAV 179 (274)
Q Consensus 100 lsg~~f~~~dL~~~~F~~~dl~~a~f~~a~l~~a~fs~a~L~~a~f~~a~f~~anf~gadf~~a~l~~a~f~~adL~~A~ 179 (274)
+.+++|.+++|++++|.+++|.+++|.+++|++++|.+++|.+++|.+++|.+++|.+++|.+++|.+++|.+++|.+|+
T Consensus 156 L~g~DLs~adL~gadLsgadLs~A~F~gAnL~~a~LsgA~L~~AnL~~A~f~~a~f~~Anf~~AdL~~A~Ls~A~L~gA~ 235 (291)
T PRK15197 156 LRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAI 235 (291)
T ss_pred CCCCCCCCCCCCCCcCCCCcccCccccccCcCCccccccccCCcEecccchhhhhhhhceeccCcCceeecCccCcCCCE
Confidence 45555555555555555555555555555555555555555555555555555555555555555554444444444444
Q ss_pred ecccccccccccCcEEeCCcccCc-eeCHH
Q 023997 180 LVRTVLTRSDLGGAIIEGADFSDA-VIDLA 208 (274)
Q Consensus 180 l~~a~l~~a~f~~a~l~gadf~~A-~L~~~ 208 (274)
|.+++|++++|.+++|.+++|.++ .|.+.
T Consensus 236 L~gAdLs~A~L~gAnL~~A~L~~a~~L~ga 265 (291)
T PRK15197 236 LFGSDLTDTKLNGAKLDKIALTLAKALTGA 265 (291)
T ss_pred eCCCCcCCCCCCCCCCCccccccCCCCCCC
Confidence 444444444444444444444444 44433
No 2
>PRK15197 secreted effector protein PipB; Provisional
Probab=99.71 E-value=3.9e-18 Score=157.06 Aligned_cols=109 Identities=21% Similarity=0.232 Sum_probs=48.9
Q ss_pred CCCceecCccccCccccCceecCceeccceecCceecCccccccccccceeecceecccccccccccceeecceeeccce
Q 023997 100 GSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAV 179 (274)
Q Consensus 100 lsg~~f~~~dL~~~~F~~~dl~~a~f~~a~l~~a~fs~a~L~~a~f~~a~f~~anf~gadf~~a~l~~a~f~~adL~~A~ 179 (274)
+++++|++++|++++|.+++|++++|.+++|.+++|.+++|++++|.+++|.+++|.+++|++++|.+++|.+|+|.+++
T Consensus 161 Ls~adL~gadLsgadLs~A~F~gAnL~~a~LsgA~L~~AnL~~A~f~~a~f~~Anf~~AdL~~A~Ls~A~L~gA~L~gAd 240 (291)
T PRK15197 161 LAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSD 240 (291)
T ss_pred CCCCCCCCCcCCCCcccCccccccCcCCccccccccCCcEecccchhhhhhhhceeccCcCceeecCccCcCCCEeCCCC
Confidence 34444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred ecccccccccccCcEEeCC-cccCceeCHH
Q 023997 180 LVRTVLTRSDLGGAIIEGA-DFSDAVIDLA 208 (274)
Q Consensus 180 l~~a~l~~a~f~~a~l~ga-df~~A~L~~~ 208 (274)
|++++|.+++|.+++|.++ +|++++|++.
T Consensus 241 Ls~A~L~gAnL~~A~L~~a~~L~gad~~ga 270 (291)
T PRK15197 241 LTDTKLNGAKLDKIALTLAKALTGADLTGS 270 (291)
T ss_pred cCCCCCCCCCCCccccccCCCCCCCcccCC
Confidence 4444444444444444444 4444444433
No 3
>PRK15196 secreted effector protein PipB2; Provisional
Probab=99.64 E-value=7.6e-17 Score=152.53 Aligned_cols=7 Identities=14% Similarity=0.135 Sum_probs=3.4
Q ss_pred CeeEEee
Q 023997 33 PLWVACQ 39 (274)
Q Consensus 33 ~~~~~~~ 39 (274)
|++|-=+
T Consensus 103 ~v~v~v~ 109 (350)
T PRK15196 103 QVIVRVS 109 (350)
T ss_pred cEEEEEe
Confidence 4555433
No 4
>PRK15196 secreted effector protein PipB2; Provisional
Probab=99.62 E-value=2.1e-16 Score=149.52 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=17.1
Q ss_pred CCCceecCccccCccccCceecCceeccceecCceecCcc
Q 023997 100 GSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSK 139 (274)
Q Consensus 100 lsg~~f~~~dL~~~~F~~~dl~~a~f~~a~l~~a~fs~a~ 139 (274)
+.+++|++++|.+++|.+++|++++|.+++|.+++|.+++
T Consensus 189 ~~~a~L~~AnLs~a~f~~a~L~~A~L~~a~l~~A~f~~~n 228 (350)
T PRK15196 189 CEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHAN 228 (350)
T ss_pred ccCCeecCcchhhhhhccCccccceecccccceeEccCCE
Confidence 3444444444444444444444444444444333333333
No 5
>PRK15377 E3 ubiquitin-protein ligase SopA; Provisional
Probab=99.61 E-value=4e-16 Score=157.10 Aligned_cols=105 Identities=14% Similarity=0.230 Sum_probs=62.1
Q ss_pred CCCceecCccccCccccCceecCceeccceecCce-ecCccccccccccceeecceecccccccccccceeecceeeccc
Q 023997 100 GSAAQFGSADLRKAVHVKENFRRANFTSADMRESD-FSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNA 178 (274)
Q Consensus 100 lsg~~f~~~dL~~~~F~~~dl~~a~f~~a~l~~a~-fs~a~L~~a~f~~a~f~~anf~gadf~~a~l~~a~f~~adL~~A 178 (274)
+++++|.++||++++|.+++|.+++|.+++|++++ |.+|+|.+++|.+|+|.+++|.+|+|.+++|.+++|.+++|.+|
T Consensus 187 Le~vdFsg~DLSGADFsg~DLSgAnFsgA~Lr~AdiL~gAdLsgAnLs~AdLs~AnFsgcnLs~AnLs~A~L~~AdFsgA 266 (782)
T PRK15377 187 GEELTYADRDFSNADFRNINFSKINPSGFMLRDGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNS 266 (782)
T ss_pred CccCCcCCCcCCCCCCCCCcccCCcchhhcccCCCCcCCCccCCeEcccchhhhhhhheeeecccccCcCEeCCCEecCC
Confidence 45566666666666666666666666666666666 66666666666666666666666666555555555555555555
Q ss_pred eeccccccccc--ccCcEEeCCcccCce
Q 023997 179 VLVRTVLTRSD--LGGAIIEGADFSDAV 204 (274)
Q Consensus 179 ~l~~a~l~~a~--f~~a~l~gadf~~A~ 204 (274)
+|.+++|.+++ +.++++.+++|++|+
T Consensus 267 dLkgADLSgS~lt~~~inLs~A~LkGA~ 294 (782)
T PRK15377 267 DMNEASLKYSITTQQQPSFIETTLKNTI 294 (782)
T ss_pred CCCCCCCCCCcccccccccchhhcCCcE
Confidence 55555555552 233444444444444
No 6
>PRK15377 E3 ubiquitin-protein ligase SopA; Provisional
Probab=99.58 E-value=8.4e-16 Score=154.81 Aligned_cols=108 Identities=22% Similarity=0.303 Sum_probs=68.1
Q ss_pred cCCCceecCccccCccccCceecCceeccce-ecCceecCccccccccccceeecceecccccccccccceeecceeecc
Q 023997 99 IGSAAQFGSADLRKAVHVKENFRRANFTSAD-MRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTN 177 (274)
Q Consensus 99 ~lsg~~f~~~dL~~~~F~~~dl~~a~f~~a~-l~~a~fs~a~L~~a~f~~a~f~~anf~gadf~~a~l~~a~f~~adL~~ 177 (274)
.+.+++|++++|++++|.+++|.+++|.+++ |++|+|.+++|.+++|.++.|.+|+|.+++|+++.|.+++|.+|+|.+
T Consensus 191 dFsg~DLSGADFsg~DLSgAnFsgA~Lr~AdiL~gAdLsgAnLs~AdLs~AnFsgcnLs~AnLs~A~L~~AdFsgAdLkg 270 (782)
T PRK15377 191 TYADRDFSNADFRNINFSKINPSGFMLRDGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNE 270 (782)
T ss_pred CcCCCcCCCCCCCCCcccCCcchhhcccCCCCcCCCccCCeEcccchhhhhhhheeeecccccCcCEeCCCEecCCCCCC
Confidence 3566777777777777777777777777776 677766666666666666666666666666666666666666666666
Q ss_pred ceeccc-------ccccccccCcE-EeCCcccCceeC
Q 023997 178 AVLVRT-------VLTRSDLGGAI-IEGADFSDAVID 206 (274)
Q Consensus 178 A~l~~a-------~l~~a~f~~a~-l~gadf~~A~L~ 206 (274)
++|.++ ++.+++|+||+ +.+|+|.|+.++
T Consensus 271 ADLSgS~lt~~~inLs~A~LkGA~I~~gAnLlGAiL~ 307 (782)
T PRK15377 271 ASLKYSITTQQQPSFIETTLKNTIIIHKANLSGVILN 307 (782)
T ss_pred CCCCCCcccccccccchhhcCCcEeccCCccccceee
Confidence 666665 23334444444 244444444444
No 7
>PRK09718 hypothetical protein; Validated
Probab=99.55 E-value=3.5e-15 Score=144.02 Aligned_cols=105 Identities=15% Similarity=0.302 Sum_probs=50.8
Q ss_pred CCCceecCccccCccccCceecCceeccceecCceecCcccccc-----ccccceeecceecccccccccccceeeccee
Q 023997 100 GSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGA-----YLEKAVAYKANFTGADLSDTLMDRMVLNEAN 174 (274)
Q Consensus 100 lsg~~f~~~dL~~~~F~~~dl~~a~f~~a~l~~a~fs~a~L~~a-----~f~~a~f~~anf~gadf~~a~l~~a~f~~ad 174 (274)
+.+|+|++|+|++++|.+++|.++.|.++.|.+|+|.+++|.++ .|.++.|.+|++.|++|+++.|.++.|.+|+
T Consensus 97 FegCdFsgCdFS~csFs~~dLqDV~FEcA~Lg~CNFsgAdLsgA~FarA~L~rvsFinCKLsGAdFSgA~Lk~V~FsdCn 176 (512)
T PRK09718 97 LTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFKCRRLHNVIFIKASGEYVDFSKNILDTVDFSQSQ 176 (512)
T ss_pred EcccEecCCEEeeceecCCEEEeEEEeccccCccccccCCCCCCccccceecceEEEeccccCcccccCccCCcEEeeeE
Confidence 45555666666555555565555555555555555555555543 3333444444444444444444444444444
Q ss_pred eccceecccccccccccCcEEeCCcccCce
Q 023997 175 LTNAVLVRTVLTRSDLGGAIIEGADFSDAV 204 (274)
Q Consensus 175 L~~A~l~~a~l~~a~f~~a~l~gadf~~A~ 204 (274)
|.+++|.+++|++++|.+++|.+++|.+++
T Consensus 177 L~yAnFsgAnLskA~F~gCDLseAdFSEcd 206 (512)
T PRK09718 177 LTHSNFRECQIRNSNFDNCYLYASHFTRAE 206 (512)
T ss_pred ecccCCCCCcCCCCEEeCccCCcCCccCCc
Confidence 444444444444444433333333333333
No 8
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=99.54 E-value=1e-15 Score=134.86 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=20.8
Q ss_pred CCCceecCccccCccccCceecCceeccceecCceecCc
Q 023997 100 GSAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGS 138 (274)
Q Consensus 100 lsg~~f~~~dL~~~~F~~~dl~~a~f~~a~l~~a~fs~a 138 (274)
++|+|++..||+..+|+.+++++++|..++|.-|+|..+
T Consensus 138 lSGaDLskLDlr~inFkyA~ls~c~lshtNL~ca~lerA 176 (302)
T KOG1665|consen 138 LSGADLSKLDLRLINFKYANLSNCNLSHTNLQCAKLERA 176 (302)
T ss_pred ccccchhhcccccccceehhhccccccccchhhhhhccc
Confidence 566666655555556655555555555544444443333
No 9
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=99.54 E-value=1.8e-15 Score=133.30 Aligned_cols=45 Identities=24% Similarity=0.352 Sum_probs=18.1
Q ss_pred CCceecCccccCccccCceecCceeccceecCceecCcccccccc
Q 023997 101 SAAQFGSADLRKAVHVKENFRRANFTSADMRESDFSGSKFNGAYL 145 (274)
Q Consensus 101 sg~~f~~~dL~~~~F~~~dl~~a~f~~a~l~~a~fs~a~L~~a~f 145 (274)
+|.+|+|+||+..||...||+.+++++|.|..+++..++|..|++
T Consensus 134 qGvNlSGaDLskLDlr~inFkyA~ls~c~lshtNL~ca~lerADl 178 (302)
T KOG1665|consen 134 QGVNLSGADLSKLDLRLINFKYANLSNCNLSHTNLQCAKLERADL 178 (302)
T ss_pred ecccccccchhhcccccccceehhhccccccccchhhhhhccccc
Confidence 334444444444444444444444444444444444444443333
No 10
>PLN00077 photosystem II reaction centre W protein; Provisional
Probab=31.55 E-value=74 Score=25.94 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=18.9
Q ss_pred ccCCCCCCccccCCC-CCeeEEeeccccc
Q 023997 17 CSSSSKGPYQLHALS-KPLWVACQISSKT 44 (274)
Q Consensus 17 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 44 (274)
+++.+++...+|+++ +.-+|.|+++.+-
T Consensus 15 raa~s~pvlGLP~l~~~~~~v~Cs~e~k~ 43 (128)
T PLN00077 15 RAAAARPVLGLPQLRARSERVRCSYEKKA 43 (128)
T ss_pred hhhhcCcccCchhhhccCCceEEecccCc
Confidence 344555567777776 3339999998664
No 11
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=30.80 E-value=39 Score=31.34 Aligned_cols=15 Identities=33% Similarity=0.499 Sum_probs=9.2
Q ss_pred cCCCCCCCcchhhhc
Q 023997 218 NGTNPITGVSTRKSL 232 (274)
Q Consensus 218 ~g~np~tg~~tr~sL 232 (274)
+-.||..|.-..++.
T Consensus 244 SVKNP~SG~I~A~~I 258 (277)
T PF12541_consen 244 SVKNPISGKIRADSI 258 (277)
T ss_pred eecCCCCCEEEcccc
Confidence 445787777655544
No 12
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=29.00 E-value=59 Score=31.68 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=14.7
Q ss_pred ecCccccCccccCce-ecCceec---cceecCceecCc
Q 023997 105 FGSADLRKAVHVKEN-FRRANFT---SADMRESDFSGS 138 (274)
Q Consensus 105 f~~~dL~~~~F~~~d-l~~a~f~---~a~l~~a~fs~a 138 (274)
+.++.|.++.|.+-+ +++.-|. +..|.||+|.|.
T Consensus 120 M~~VtF~ni~F~~~~~~~g~~f~~~t~~~~hgC~F~gf 157 (386)
T PF01696_consen 120 MEGVTFVNIRFEGRDTFSGVVFHANTNTLFHGCSFFGF 157 (386)
T ss_pred eeeeEEEEEEEecCCccceeEEEecceEEEEeeEEecC
Confidence 334444444444444 4444442 233445555443
No 13
>PRK09716 hypothetical protein; Provisional
Probab=23.61 E-value=42 Score=30.70 Aligned_cols=19 Identities=26% Similarity=0.261 Sum_probs=7.3
Q ss_pred eecCccccCccccCceecC
Q 023997 104 QFGSADLRKAVHVKENFRR 122 (274)
Q Consensus 104 ~f~~~dL~~~~F~~~dl~~ 122 (274)
+++..||++.++.--||.+
T Consensus 152 dlssldlrni~l~~ydftd 170 (395)
T PRK09716 152 DLSSLDLRNVDLDYYDFTD 170 (395)
T ss_pred ecccccccccceeecccch
Confidence 3333444443333333333
No 14
>PF07123 PsbW: Photosystem II reaction centre W protein (PsbW); InterPro: IPR009806 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbW found in PSII, where it is a subunit of the oxygen-evolving complex. PsbW appears to have several roles, including guiding PSII biogenesis and assembly, stabilising dimeric PSII [], and facilitating PSII repair after photo-inhibition []. There appears to be two classes of PsbW, class 1 being found predominantly in algae and cyanobacteria, and class 2 being found predominantly in plants. This entry represents class 2 PsbW.; GO: 0015979 photosynthesis, 0009507 chloroplast, 0009523 photosystem II
Probab=23.51 E-value=1.3e+02 Score=25.08 Aligned_cols=22 Identities=23% Similarity=0.240 Sum_probs=17.3
Q ss_pred CCccccCCCCCeeEEeeccccc
Q 023997 23 GPYQLHALSKPLWVACQISSKT 44 (274)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~ 44 (274)
+..++++++.+-+|.|+++.+.
T Consensus 31 ~~~glp~~~~r~~v~cs~~~~~ 52 (138)
T PF07123_consen 31 PVLGLPAMRARRRVRCSAEKKP 52 (138)
T ss_pred cccCCCccccccceEEEeccCc
Confidence 5667777777768999999776
No 15
>PLN00019 photosystem I reaction center subunit III; Provisional
Probab=20.39 E-value=1.7e+02 Score=26.30 Aligned_cols=11 Identities=27% Similarity=0.507 Sum_probs=8.2
Q ss_pred CCCeeEEeecc
Q 023997 31 SKPLWVACQIS 41 (274)
Q Consensus 31 ~~~~~~~~~~~ 41 (274)
.....|+|+++
T Consensus 23 ~~~~~~~csa~ 33 (223)
T PLN00019 23 RRSARVVCSAS 33 (223)
T ss_pred cceEEEEeecc
Confidence 44558999986
Done!