Query 023999
Match_columns 274
No_of_seqs 132 out of 1390
Neff 8.8
Searched_HMMs 13730
Date Mon Mar 25 16:26:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023999.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023999hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ukwa2 e.6.1.1 (A:32-258) Med 100.0 1.1E-47 7.9E-52 322.6 21.6 225 29-257 3-227 (227)
2 d1jqia2 e.6.1.1 (A:4-234) Buty 100.0 1.3E-47 9.8E-52 323.0 21.7 227 29-258 5-231 (231)
3 d2d29a2 e.6.1.1 (A:2-234) Acyl 100.0 4.6E-47 3.4E-51 320.0 23.4 225 29-256 4-232 (233)
4 d3mdea2 e.6.1.1 (A:11-241) Med 100.0 8E-47 5.9E-51 317.6 22.5 226 28-257 3-231 (231)
5 d1ivha2 e.6.1.1 (A:6-241) Isov 100.0 7.6E-47 5.6E-51 319.3 21.2 228 29-257 6-235 (236)
6 d1rx0a2 e.6.1.1 (A:10-240) Iso 100.0 4.9E-46 3.6E-50 313.4 23.3 229 24-257 3-231 (231)
7 d1r2ja2 e.6.1.1 (A:3-212) Prot 100.0 4.8E-44 3.5E-48 297.0 20.8 206 45-258 4-209 (210)
8 d1siqa2 e.6.1.1 (A:3-238) Glut 100.0 4.8E-44 3.5E-48 302.1 18.9 223 28-258 11-235 (236)
9 d1buca2 e.6.1.1 (A:1-232) Buty 100.0 3.8E-43 2.7E-47 295.6 22.3 226 29-257 3-232 (232)
10 d2c12a2 e.6.1.1 (A:2-260) Nitr 100.0 1.4E-42 1E-46 296.9 19.5 226 29-256 3-259 (259)
11 d2ddha3 e.6.1.2 (A:1-267) Pero 100.0 1.6E-30 1.2E-34 221.8 13.9 216 32-257 26-256 (267)
12 d1w07a3 e.6.1.2 (A:2-272) Acyl 100.0 9.5E-29 6.9E-33 211.1 11.9 214 32-258 27-258 (271)
13 d1u8va2 e.6.1.1 (A:1-275) 4-hy 99.8 1E-21 7.4E-26 167.5 4.1 130 125-254 118-273 (275)
14 d1jhfa1 a.4.5.2 (A:2-72) LexA 38.0 37 0.0027 20.3 5.5 52 30-82 2-57 (71)
15 d1lvaa3 a.4.5.35 (A:511-574) C 28.6 52 0.0038 19.1 4.8 48 31-79 1-52 (64)
No 1
>d1ukwa2 e.6.1.1 (A:32-258) Medium chain acyl-CoA dehydrogenase, NM domains {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.1e-47 Score=322.57 Aligned_cols=225 Identities=35% Similarity=0.554 Sum_probs=211.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHHHHhh
Q 023999 29 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRA 108 (274)
Q Consensus 29 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~lg~~ 108 (274)
+.+|+||+ ++++.+++|+++.+.+.+.+.|+.+.+|. ++|++++++||+++.+|+++||.|.++.+.+.++|+++++
T Consensus 3 f~Lteeq~-~l~~~~r~f~~~~~~p~a~~~d~~~~~p~--~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~e~~~~~ 79 (227)
T d1ukwa2 3 FSLTEEQR-QLQALARRFAKEVILPVAQEYDEKEEVPW--PVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYA 79 (227)
T ss_dssp CCCCHHHH-HHHHHHHHHHHHTTGGGHHHHHHHTCCCH--HHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHHHhChHHHHHHHhcCCCCH--HHHHHHHhhhhhhhccccccCcccccccccccchhhhccc
Confidence 47899999 99999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred cCcchhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEeCCeEEEeeEeecccC
Q 023999 109 SGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTN 188 (274)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~vs~ 188 (274)
+.++++....+. .+...+..+++++||++|++++++|+.++++++|||++|+|...++|+|++++|||+|||+|.||++
T Consensus 80 ~~~~~~~~~~~~-~~~~~i~~~g~~~qk~~~l~~~~~g~~~~~~a~tE~~~gsd~~~~~t~a~~~~~g~~lnG~K~~vs~ 158 (227)
T d1ukwa2 80 CMGIYTIPMASD-LGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISN 158 (227)
T ss_dssp CHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred cccccccccccc-cchhhhhccCCHHHHHHhccccccccccccccccCCCcCcCCcCceEEEEEECCEEEEEeEEeccCc
Confidence 988877666655 6677888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccCC
Q 023999 189 GPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQE 257 (274)
Q Consensus 189 ~~~a~~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~~ 257 (274)
+..||+++|.|+.+++.+.+++++|+||+++|||++.+.|+++|++++++++|+|+||+||++++||++
T Consensus 159 ~~~Ad~~~v~a~~~~~~~~~g~~~f~V~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~llGeE 227 (227)
T d1ukwa2 159 GGEAEWVVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEE 227 (227)
T ss_dssp TTTEEEEEEEEESCGGGGGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCT
T ss_pred cccchhhccccccCCccCcCCcEEEEEeCCCCceEeccccCcccCCCCceEEEEEeeEEEcHHHccCCC
Confidence 999999999999876555667899999999999999999999999999999999999999999999864
No 2
>d1jqia2 e.6.1.1 (A:4-234) Butyryl-CoA dehydrogenase, NM domains {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00 E-value=1.3e-47 Score=322.97 Aligned_cols=227 Identities=36% Similarity=0.654 Sum_probs=213.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHHHHhh
Q 023999 29 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRA 108 (274)
Q Consensus 29 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~lg~~ 108 (274)
.++|+||+ ++++++|+|+++.+.|.+.++|+.+.+|. ++|+.++++||+++.+|++|||.|+++.+.+.++|++++.
T Consensus 5 ~~L~ee~~-~l~~~~r~f~~~~i~p~a~~~d~~~~~p~--e~~~~l~~~Gl~~~~~p~~~GG~g~~~~~~~~~~ee~~~~ 81 (231)
T d1jqia2 5 VELPETHQ-MLRQTCRDFAEKELVPIAAQLDKEHLFPT--SQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRG 81 (231)
T ss_dssp SCCCHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTCCCH--HHHHHHHHHTTTSSSSCGGGTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHHHhChHHHHHHHhcCCCCH--HHHHHHHHhCCcccccccccCCCchhHHHHHHHHHHHHhh
Confidence 47899999 99999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred cCcchhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEeCCeEEEeeEeecccC
Q 023999 109 SGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTN 188 (274)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~vs~ 188 (274)
+.+.++....+...+...+..+++++||++|++++++|++++++++|||++|+|+..++|+|++++|+|+|||+|.||++
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~a~~~~~~~~lnG~K~~vt~ 161 (231)
T d1jqia2 82 CASTGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITN 161 (231)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSTTCCCCEEEECSSEEEEEEEEEEEET
T ss_pred ccccccceeeeccchhhhhhhcCCHHHHHHHhCcccCCCccccceeccCCCCccCcccceEEEEECCEEEEeeeeeeEee
Confidence 98877776666656678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccCCC
Q 023999 189 GPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEG 258 (274)
Q Consensus 189 ~~~a~~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~~g 258 (274)
+..++++++.++.++..+.+++.+|+||++.|||++.+.|+++|++++++++|.|+||+||++++||++|
T Consensus 162 ~~~a~~~~v~a~~~~~~~~~g~~~~~Vp~~~~Gv~i~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lG~~G 231 (231)
T d1jqia2 162 SWEASATVVFASTDRSRQNKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPG 231 (231)
T ss_dssp TTTCSEEEEEEESCGGGGGGSEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTT
T ss_pred cccccccccccccccccccCCceEEEEeCCCCCeEECCccCccccCCCceEEEEEeeEEEcHHHCCCCCC
Confidence 9999999999998765555678999999999999999999999999999999999999999999999876
No 3
>d2d29a2 e.6.1.1 (A:2-234) Acyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=4.6e-47 Score=320.02 Aligned_cols=225 Identities=36% Similarity=0.626 Sum_probs=212.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHHHHhh
Q 023999 29 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRA 108 (274)
Q Consensus 29 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~lg~~ 108 (274)
+++|+||+ ++++++|+|+++.+.|.+.+.|+++.+|. ++|++++++||+++.+|+++||.|.++.+.+.++++++++
T Consensus 4 F~l~~e~~-~l~~~~r~f~~~~i~p~a~e~d~~~~~p~--~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~~~~~~~ 80 (233)
T d2d29a2 4 FEEGAEER-QVLGPFREFLKAEVAPGAAERDRTGAFPW--DLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYY 80 (233)
T ss_dssp TSCCHHHH-HHHHHHHHHHHHHTGGGHHHHHHHCCCCH--HHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHHHhCcccHHHHHHhCCCCH--HHHHHHHHhccccccccccccccccchhhhcccccccccc
Confidence 57999999 99999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred cCcchhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEeCCeEEEeeEeecccC
Q 023999 109 SGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTN 188 (274)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~vs~ 188 (274)
+.++++.+..|.......+..+++++||++|++++++|++++++|+|||++|+|...++|+|++++|+|+|||+|.||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~a~~~~~~~~lnG~K~~vs~ 160 (233)
T d2d29a2 81 DGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQ 160 (233)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred ccccccccccccccchHHHHHhChHHHHHhhCccccCCCEEEEEEecCCCCCCcccceeEEEEEECCEEEEecceecccc
Confidence 99988887777656677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCC----CCCeEEEEEeCCCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccC
Q 023999 189 GPVAQTLVVYAKTDIKAG----SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQ 256 (274)
Q Consensus 189 ~~~a~~~lv~a~~~~~~~----~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~ 256 (274)
+..||+++|+|+..++++ ..++++|+||+++|||++.+.|+++|++++++++|+|+||+||++++||+
T Consensus 161 ~~~a~~~~v~a~~~~~~~~~~~~~g~~~~lv~~~~~Gv~i~~~~~~~G~r~~~~~~v~f~~v~VP~~~llGe 232 (233)
T d2d29a2 161 GSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGE 232 (233)
T ss_dssp TTTCSEEEEEEECSCCSCGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESS
T ss_pred ccccccccccccccCCccccccccCceEEEEEcCCCCcEECCcccccccCCCCeEEEEEeeEEECHHHcCcC
Confidence 999999999999865432 35789999999999999999999999999999999999999999999986
No 4
>d3mdea2 e.6.1.1 (A:11-241) Medium chain acyl-CoA dehydrogenase, NM domains {Pig (Sus scrofa) [TaxId: 9823]}
Probab=100.00 E-value=8e-47 Score=317.63 Aligned_cols=226 Identities=37% Similarity=0.585 Sum_probs=210.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHHHHh
Q 023999 28 TSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISR 107 (274)
Q Consensus 28 ~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~lg~ 107 (274)
++++|++|+ ++++.+++|+++.+.|.+.+.|+++.+|. ++|++++++||+++.+|+++||.|.+..+.+.+.|++++
T Consensus 3 df~lseeq~-~l~~~~r~f~~~~~~p~a~~~d~~~~~p~--~~~~~l~~~Gl~~~~vP~~~GG~g~~~~~~~~~~e~l~~ 79 (231)
T d3mdea2 3 SFELTEQQK-EFQATARKFAREEIIPVAAEYDRTGEYPV--PLLKRAWELGLMNTHIPESFGGLGLGIIDSCLITEELAY 79 (231)
T ss_dssp CCCCCHHHH-HHHHHHHHHHHHTTHHHHHHHHHHCCCCH--HHHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHH-HHHHHHHHHHHHhCchhHHHHHHcCCCCH--HHHHHHHHhhhccccccccccCccccccccccchhhhcc
Confidence 357999999 99999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hcCcchhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEeCCeEEEeeEeeccc
Q 023999 108 ASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCT 187 (274)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~vs 187 (274)
++.+.++.+..+. .....|..+++++||++|++++++|++++++|+|||++|+|+.+++|+|++++|||+|||+|.||+
T Consensus 80 ~~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~l~~g~~~~~~a~tEp~~Gsd~~~~~t~a~~~~~g~~lnG~K~~vt 158 (231)
T d3mdea2 80 GCTGVQTAIEANT-LGQVPLIIGGNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWIT 158 (231)
T ss_dssp HCHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHTTSCCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred ccccccccccccc-ccchhhhhcCcccccccccchhcCCceEEEEEecCCCCCCCccCCEEEEEEECCEEEEEEEEEEeC
Confidence 9999888777665 677788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCC---CCeEEEEEeCCCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccCC
Q 023999 188 NGPVAQTLVVYAKTDIKAGS---KGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQE 257 (274)
Q Consensus 188 ~~~~a~~~lv~a~~~~~~~~---~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~~ 257 (274)
++..|++++++|+++.++.. .++++|+||++.|||++.+.|+++|++++++++|.|+||+||++++||.+
T Consensus 159 ~~~~a~~~~~~a~t~~~~~~~~~~~~~~~lv~~d~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lG~E 231 (231)
T d3mdea2 159 NGGKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEINMGQRCSDTRGIVFEDVRVPKENVLTGE 231 (231)
T ss_dssp TTTTEEEEEEEEECCCCTTSCHHHHEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGBSSCT
T ss_pred CchhccccceecccccccccccccceEEEEEeCCCCCeEEccCcccccCCCCCeEEEEEeeEEEcHHhEecCC
Confidence 99999999999998654322 36889999999999999999999999999999999999999999999853
No 5
>d1ivha2 e.6.1.1 (A:6-241) Isovaleryl-coa dehydrogenase, NM domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=7.6e-47 Score=319.35 Aligned_cols=228 Identities=64% Similarity=1.086 Sum_probs=212.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHHHHhh
Q 023999 29 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRA 108 (274)
Q Consensus 29 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~lg~~ 108 (274)
..+|+||+ ++++.+++|+++.+.+.+.+.++.+.+|..+++|+++.++||+++.+|+++||.|.++.+.+.++|+++++
T Consensus 6 ~~Lseeq~-~l~d~~~~f~~~~~~p~~~~~d~~~~~~~~~e~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~v~e~l~~~ 84 (236)
T d1ivha2 6 NGLSEEQR-QLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRA 84 (236)
T ss_dssp GTCCHHHH-HHHHHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHHHhCChhHHHHHhhCCCccHHHHHHHHHHhhhccccccccccccCcccchhhhhhhhhhhh
Confidence 46999999 99999999999999999999998888886568999999999999999999999999999999999999999
Q ss_pred cCcchhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEeCCeEEEeeEeecccC
Q 023999 109 SGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTN 188 (274)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~vs~ 188 (274)
++++++.+..+...+...|..+++++||++|++++++|+.++++|+|||.+|+|+..++|+|++++|||+|||+|.||++
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~gs~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~ 164 (236)
T d1ivha2 85 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITN 164 (236)
T ss_dssp CHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEET
T ss_pred hhccceeeeehhhhhHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCccccCeEEEEEECCEEEEEEEEEEEeC
Confidence 99988887776545677888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCC--CCCCCeEEEEEeCCCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccCC
Q 023999 189 GPVAQTLVVYAKTDIK--AGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQE 257 (274)
Q Consensus 189 ~~~a~~~lv~a~~~~~--~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~~ 257 (274)
+..|++++|.|+.... +..+++++|+||++.|||++.+.|+++|++++++++|+|+||+||++++||++
T Consensus 165 ~~~a~~~~v~a~~~~~~~~~~~g~~~flV~~~~~Gv~i~~~~~~~G~~~~~~~~v~fd~v~Vp~~~llGee 235 (236)
T d1ivha2 165 GPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHE 235 (236)
T ss_dssp GGGCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCT
T ss_pred CccccccccccccccccccccCccEEEEEeCCCCceEeCCCcCcccCCCCceEEEEEeeEEEcHHHcCCCC
Confidence 9999999999997543 23457899999999999999999999999999999999999999999999875
No 6
>d1rx0a2 e.6.1.1 (A:10-240) Isobutyryl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4.9e-46 Score=313.38 Aligned_cols=229 Identities=28% Similarity=0.504 Sum_probs=214.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHH
Q 023999 24 AFSSTSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAME 103 (274)
Q Consensus 24 ~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e 103 (274)
-..++..+++||+ ++++++++|+++.+.|.+.++|+.+.+|. ++|+++.++||+++.+|+++||.|.+..+.+.++|
T Consensus 3 ~~~~~~~Lt~e~~-~l~~~~r~F~~~~i~p~a~~~d~~~~~p~--~~~~~l~~~Gl~~~~vp~~~GG~g~~~~~~~~~~e 79 (231)
T d1rx0a2 3 CIDPSMGLNEEQK-EFQKVAFDFAAREMAPNMAEWDQKELFPV--DVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFE 79 (231)
T ss_dssp TTCTTTTCCHHHH-HHHHHHHHHHHHHTHHHHHHHHHHTCCCH--HHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHH
T ss_pred CcCCCCCCCHHHH-HHHHHHHHHHHHhCchhHHHHHhcCCCCH--HHHHHHHHcCCcccccchhhccccccchhhhhhHH
Confidence 3456678999999 99999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHhhcCcchhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEeCCeEEEeeEe
Q 023999 104 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNK 183 (274)
Q Consensus 104 ~lg~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k 183 (274)
++++++.+.++.+..+. .+...+..+++++|+++|++++.+|+...+++++||..|+|...++|+|++++|+|+|||+|
T Consensus 80 ~l~~~~~~~~~~~~~~~-~~~~~l~~~~~~e~~~~~l~~~~~g~~~~~~~~te~~~gsd~~~~~t~a~~~~~g~~LnG~K 158 (231)
T d1rx0a2 80 ALATGCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSK 158 (231)
T ss_dssp HHHTTCHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEE
T ss_pred HHhhhcccccccccccc-chhhhhhhhcchhhhhhhcchhhcccccccccccccccCCCCCCceEEEEEECCEEEEEeEE
Confidence 99999999888877776 77788999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccCC
Q 023999 184 MWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQE 257 (274)
Q Consensus 184 ~~vs~~~~a~~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~~ 257 (274)
.||+++..||+++|+++..++ +.+++++|+||++.|||++.+.|+++|++++++++|+|+||+||++++||++
T Consensus 159 ~~vs~~~~Ad~~~v~a~~~~~-~~~~~~~~lv~~d~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~llG~E 231 (231)
T d1rx0a2 159 AFISGAGESDIYVVMCRTGGP-GPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSE 231 (231)
T ss_dssp EEEETTTTCSEEEEEEESSSS-SGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESST
T ss_pred ccccCCCcCCEEEEEEeecCC-CCCceEEEEEeCCCCceEecCccCccccCCCceEEEEEccEEEcHHHEeCCC
Confidence 999999999999999997643 4557899999999999999999999999999999999999999999999864
No 7
>d1r2ja2 e.6.1.1 (A:3-212) Protein FkbI {Streptomyces hygroscopicus [TaxId: 1912]}
Probab=100.00 E-value=4.8e-44 Score=296.96 Aligned_cols=206 Identities=24% Similarity=0.381 Sum_probs=192.2
Q ss_pred HHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHHHHhhcCcchhhhhhhhHHHH
Q 023999 45 QFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCI 124 (274)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~lg~~~~~~~~~~~~~~~~~~ 124 (274)
.++.+.+.+.+.++|+++.+|. ++|++++++||+++.+|++|||.|+++.+.+.++|+++++++++++.+..|. .+.
T Consensus 4 a~~~~~i~~~Aae~d~~~~~p~--~~~~~l~~~Gl~~~~iP~e~GG~g~~~~~~~~v~e~l~~~~~~~~~~~~~~~-~~~ 80 (210)
T d1r2ja2 4 ALLTDLVGDRAAEWDTSGELPR--DLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQG-MAA 80 (210)
T ss_dssp HHHHHHHSSCHHHHHHHTCCCH--HHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHH
T ss_pred HHHHhhhhHhHHHHHHhCCCCH--HHHHHHHHcCCCcccCChhHccccccHHHHhhhhcccccccccccccccccc-ccc
Confidence 4567889999999999999999 9999999999999999999999999999999999999999999888888776 777
Q ss_pred HHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEeCCeEEEeeEeecccCCCCCCEEEEEEEeCCC
Q 023999 125 NQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIK 204 (274)
Q Consensus 125 ~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~~~g~~l~G~k~~vs~~~~a~~~lv~a~~~~~ 204 (274)
..+..+++++||++|++.+++|.. .+++++||..|+|...++|++++++|+|+|||+|.||+++..||+++|+++.+++
T Consensus 81 ~~l~~~gs~~qk~~~l~~~~~g~~-~~~~~te~~~gs~~~~~~t~a~~~~~g~~l~G~K~~vs~a~~Ad~~~v~a~~~~~ 159 (210)
T d1r2ja2 81 WTVQRLGDAGQRATFLKELTSGKL-AAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQEDG 159 (210)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCC-C-EEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBCSSS
T ss_pred hhhhhccccccccccccccccccc-ccccccccccccccccccceEEEeccceEEEEeecccccccccccccceeeecCC
Confidence 889999999999999999999985 5899999999999999999999999999999999999999999999999987543
Q ss_pred CCCCCeEEEEEeCCCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccCCC
Q 023999 205 AGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEG 258 (274)
Q Consensus 205 ~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~~g 258 (274)
+..+|+||++.|||++.+.|+++|++++++++++|+||+||++++||.+|
T Consensus 160 ----~~~~~lv~~~~~Gv~v~~~~~~~G~r~~~~~~v~f~~v~VP~~~~lG~~G 209 (210)
T d1r2ja2 160 ----SGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSG 209 (210)
T ss_dssp ----CCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTT
T ss_pred ----CceEEeecCCCCCeEeccCCCcccCCCCCeEEEEEeeEEECHHHCcCCCC
Confidence 45799999999999999999999999999999999999999999999887
No 8
>d1siqa2 e.6.1.1 (A:3-238) Glutaryl-CoA dehydrogenase GCDH {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4.8e-44 Score=302.09 Aligned_cols=223 Identities=30% Similarity=0.531 Sum_probs=204.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHHHHh
Q 023999 28 TSLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISR 107 (274)
Q Consensus 28 ~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~lg~ 107 (274)
+..+|+||+ ++++++|+|+++.+.|.+.+.++++.+|. ++|+++.++||+++.+| ++||.|.+..+.+.+++++++
T Consensus 11 d~~Lteeq~-~l~d~~r~f~~~~i~p~~~~~d~~~~~p~--~~~~~~~~~g~~~~~i~-~~gg~g~~~~~~~~~~e~~~~ 86 (236)
T d1siqa2 11 EEQLTTDEI-LIRDTFRTYCQERLMPRILLANRNEVFHR--EIISEMGELGVLGPTIK-GYGCAGVSSVAYGLLARELER 86 (236)
T ss_dssp GGGSCHHHH-HHHHHHHHHHHHHTHHHHHHHHHHTCCCT--HHHHHHHHTTCSSTTCE-ETTEECCCHHHHHHHHHHHHT
T ss_pred cccCCHHHH-HHHHHHHHHHHhhCChhHHHHHhcCCCCH--HHHHHhhhhhccccccc-ccccCCcCHHHHHHHHHhhhc
Confidence 346899999 99999999999999999999999999999 99999999999999885 689999999999999999999
Q ss_pred hcCcchhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEE--EEeCCeEEEeeEeec
Q 023999 108 ASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMW 185 (274)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a--~~~~~g~~l~G~k~~ 185 (274)
.+.+.+..+..+..++...+..+++++||++|++++++|+.++++|+|||++|+|...+.|++ ++++|+|+|||+|.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~L~~l~~G~~~~~~a~tEp~~gsd~~~~~t~a~~~~~~~~~vlnG~K~~ 166 (236)
T d1siqa2 87 VDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTW 166 (236)
T ss_dssp TCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEE
T ss_pred cccccccccccccccchhhhhhhcCHHHHHHhcCccCCCCEEecccCcCCCcccccccccccccccccccceEecccccc
Confidence 998877666666546678899999999999999999999999999999999999998887766 667888999999999
Q ss_pred ccCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccCCC
Q 023999 186 CTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEG 258 (274)
Q Consensus 186 vs~~~~a~~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~~g 258 (274)
|+++..||+++|+|++++ .++++|+||++.|||++.+.++++|++++++++|.|+||+||++++||..+
T Consensus 167 vt~a~~Ad~~~V~art~~----~~~~~flV~~~~~Gv~v~~~~~~~g~r~~~~~~l~fd~V~VP~~~llGg~~ 235 (236)
T d1siqa2 167 ITNSPMADLFVVWARCED----GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGAS 235 (236)
T ss_dssp EETGGGCSEEEEEEEETT----SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTCC
T ss_pred EecCCCceEEEEEecccC----CcceEEeecCCCCCeEeCCcccccccccCceEEEEEeeEEECHHHCcCCCC
Confidence 999999999999999864 368899999999999999999999999999999999999999999998543
No 9
>d1buca2 e.6.1.1 (A:1-232) Butyryl-CoA dehydrogenase, NM domains {Megasphaera elsdenii [TaxId: 907]}
Probab=100.00 E-value=3.8e-43 Score=295.57 Aligned_cols=226 Identities=37% Similarity=0.639 Sum_probs=206.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCC---CCCHHHHHHHHHHH
Q 023999 29 SLLFDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGL---GLGYLYHCIAMEEI 105 (274)
Q Consensus 29 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~---g~~~~~~~~v~e~l 105 (274)
+.+|++|+ ++++++++|+++.+.|.+.+.|+.+.+|. ++|++++++||+++.+|++|||. +........+++.+
T Consensus 3 f~lt~~~~-~l~~~~r~f~~~~l~p~~~e~D~~~~~p~--e~~~~l~~~G~~~~~vP~~~Gg~~~~~~~~~~~~~~~~~~ 79 (232)
T d1buca2 3 FNLTDIQQ-DFLKLAHDFGEKKLAPTVTERDHKGIYDK--ELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEEL 79 (232)
T ss_dssp CCCCHHHH-HHHHHHHHHHHHTTTTTHHHHHHHTCCCH--HHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHHHhCchhHHHHHhcCCCCH--HHHHHHHhhhcccccccccccccccccccchheehhhhhh
Confidence 47899999 99999999999999999999999999999 99999999999999999999965 56888888888888
Q ss_pred HhhcCcchhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEeCCe-EEEeeEee
Q 023999 106 SRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG-YIINGNKM 184 (274)
Q Consensus 106 g~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~~~g-~~l~G~k~ 184 (274)
+............+..++...+..+++++||.+|++++++|+++++++++||.+|+|...+.|++++++|| |+|||+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~~~~~~~~~G~~~~~~a~te~~~gs~~~~~~t~a~~~~dg~~~lnG~K~ 159 (232)
T d1buca2 80 AKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKI 159 (232)
T ss_dssp HHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEE
T ss_pred hhccccccccccchhhhhhhHHHHhhhhhhhhhhhhhhhCCCEEecccccccccccccccceEEEEEcCCCEEEEEEEEe
Confidence 87666555444444436677889999999999999999999999999999999999999999999999885 99999999
Q ss_pred cccCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccCC
Q 023999 185 WCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQE 257 (274)
Q Consensus 185 ~vs~~~~a~~~lv~a~~~~~~~~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~~ 257 (274)
||+++..||+++|.++..++.+.+++++|+||+++|||++.+.|+++|++++++++|+|+||+||++++||++
T Consensus 160 ~vt~a~~ad~~~v~a~~~~~~~~~g~~~~lv~~~~~Gv~i~~~~~~~G~r~~~~~~l~f~~v~vp~~~llGee 232 (232)
T d1buca2 160 FITNGGAADIYIVFAMTDKSKGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEE 232 (232)
T ss_dssp EEETTTTCSEEEEEEESCSSSSTTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCT
T ss_pred eecccccceEEEEEEEecCCCCCceeEEEEEeCCCCceEeCCccCcccCCCCceEEEEEeeEEEcHHHccCCC
Confidence 9999999999999999887777778999999999999999999999999999999999999999999999874
No 10
>d2c12a2 e.6.1.1 (A:2-260) Nitroalkane oxidase {Fusarium oxysporum [TaxId: 5507]}
Probab=100.00 E-value=1.4e-42 Score=296.85 Aligned_cols=226 Identities=20% Similarity=0.320 Sum_probs=195.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhcCcchhchh----ccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHH
Q 023999 29 SLLFDDTQLQFKESVGQFARENIAPRAANID----QSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEE 104 (274)
Q Consensus 29 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~ 104 (274)
++++++|+ ++++++|+|+.+.+.|...+.+ +.+.++..+++|++++++||+++.+|++|||.|.++.+.+.++|+
T Consensus 3 f~lt~eq~-~l~~~~r~f~~~~~~p~~~~~~~~~d~~~~~~~~~e~~~~~~~~G~~~~~vPee~GG~g~~~~~~~~~~ee 81 (259)
T d2c12a2 3 FKLSPSQL-EARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEE 81 (259)
T ss_dssp CCCCHHHH-HHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHHHhCCcchHHHhhhccccccccchHHHHHHHHHcCCCCcCCChHHhhccchhhhhhhhhhh
Confidence 47899999 9999999999999888754432 223232223899999999999999999999999999999999999
Q ss_pred HHhhcCcchhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhc--CCceEEEEeeCCCCCCCCC-----CceEEEEEeCCeE
Q 023999 105 ISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLIS--GEHVGALAMSEPNAGSDVV-----GMKCKADRVDGGY 177 (274)
Q Consensus 105 lg~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~--G~~~~~~a~te~~~g~d~~-----~~~~~a~~~~~g~ 177 (274)
++++++++++.+..+. ++...+..+++++||++|++++++ |++++++++|||++|+|.. +++|+|++++|+|
T Consensus 82 l~~~~~~~~~~~~~~~-~~~~~i~~~g~~eq~~~~l~~~~~~~g~~~~a~a~TEp~~Gsd~~~~~~~~~~t~a~~~g~~~ 160 (259)
T d2c12a2 82 LFAVEPATSITIVATA-LGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEW 160 (259)
T ss_dssp HHTTCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEE
T ss_pred cccccccccccccccc-chHHHHHHhhhccccccccccccccceeeeeeccccCCccccccccccccccccccccccchh
Confidence 9999999988887776 777788899999999999999987 7889999999999999964 4779999999999
Q ss_pred EEeeEeecccCC-----CCCCEEEEEEEeCCCCC---------CCCeEEEEEeCCCCC------eEEeccCcccCCCCCc
Q 023999 178 IINGNKMWCTNG-----PVAQTLVVYAKTDIKAG---------SKGITAFIIEKGMPG------FSTAQKLDKLGMRGSD 237 (274)
Q Consensus 178 ~l~G~k~~vs~~-----~~a~~~lv~a~~~~~~~---------~~~~~~~lv~~~~~g------v~~~~~~~~~Gl~~~~ 237 (274)
+|||+|.||||+ ..||+++|+|+..+++. .+++++|+||++.|| +.+...++++|+++++
T Consensus 161 vlnG~K~~vt~a~~~~~~~ad~~~v~ar~~~~~~~~~~~~~~~~~g~s~~lVp~~~~g~~~~~~~~~~~~~~~~G~~~~~ 240 (259)
T d2c12a2 161 VISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTS 240 (259)
T ss_dssp EEEEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTCC
T ss_pred ccceeeeeecCCcccccccceEEEEEEEecCCCccccccccCCCCceEEEEEeCCCCCcccCCCeeecCcccccccccCc
Confidence 999999999998 45889999999865432 246889999988765 4455568999999999
Q ss_pred eeeEEeceeeeCCCCcccC
Q 023999 238 TCELVFENCFVPNENVLGQ 256 (274)
Q Consensus 238 ~~~v~f~~v~Vp~~~llg~ 256 (274)
+++|.|+||+||++++||.
T Consensus 241 ~~~v~f~dv~Vp~~~llGt 259 (259)
T d2c12a2 241 GPHTRFTEFHVPHENLLCT 259 (259)
T ss_dssp CCEEEEEEEEEEGGGBCSC
T ss_pred eEEEEEeeEEECHHHeeCc
Confidence 9999999999999999984
No 11
>d2ddha3 e.6.1.2 (A:1-267) Peroxisomal acyl-CoA oxidase-II, domains 1 and 2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.97 E-value=1.6e-30 Score=221.75 Aligned_cols=216 Identities=17% Similarity=0.252 Sum_probs=157.9
Q ss_pred CHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHHHHhhcCc
Q 023999 32 FDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGS 111 (274)
Q Consensus 32 s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~lg~~~~~ 111 (274)
++++. ++++.+++++.+. |.....+... +.. .+.++.....++.....++++|+. .+.+...+.+.. ..+.+
T Consensus 26 ~~e~~-~~r~~v~~~i~~d--p~f~~~~~~~-~~~-~e~~~~~~~~~~~~~~~~~~~G~~--~~~~~~~~~~~~-~~~~~ 97 (267)
T d2ddha3 26 SPENT-RRRREIENLILND--PDFQHEDYNF-LTR-SQRYEVAVKKSATMVKKMREYGIS--DPEEIMWFKNSV-HRGHP 97 (267)
T ss_dssp SHHHH-HHHHHHHHHHHTC--GGGCCSCGGG-SCH-HHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHH-HTTCC
T ss_pred CHHHH-HHHHHHHHHHhcC--cccCCccccc-CCH-HHHHHHHHHHHHHHHHHHHhcCCC--CHHHHHHHHhhh-ccCCC
Confidence 45666 7888888887653 2211111111 111 144544444333333334444443 344444444333 33333
Q ss_pred chhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEeC--CeEEEee-----Eee
Q 023999 112 VGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVD--GGYIING-----NKM 184 (274)
Q Consensus 112 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~~--~g~~l~G-----~k~ 184 (274)
..+..|..+....|..+|+++||++|++++++|++.+|+|+|||++|+|+..++|+|++++ +.|+||| +|.
T Consensus 98 --~~~~v~~~l~~~~i~~~Gt~eqk~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~T~A~~~~~~~~~vlnG~k~~~~K~ 175 (267)
T d2ddha3 98 --EPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKW 175 (267)
T ss_dssp --CTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSSTTSEE
T ss_pred --ceehhhhhhhhhHHHhhCCHHHHHHHHHHHhcCCeeeeehhcccCccccccccccceeecccCceeecCccccceeee
Confidence 3345555466677889999999999999999999999999999999999999999999876 5699999 699
Q ss_pred cccC-CCCCCEEEEEEEeCCCCCCCCeEEEEEeC-------CCCCeEEeccCcccCCCCCceeeEEeceeeeCCCCcccC
Q 023999 185 WCTN-GPVAQTLVVYAKTDIKAGSKGITAFIIEK-------GMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQ 256 (274)
Q Consensus 185 ~vs~-~~~a~~~lv~a~~~~~~~~~~~~~~lv~~-------~~~gv~~~~~~~~~Gl~~~~~~~v~f~~v~Vp~~~llg~ 256 (274)
|++| +..|++++|+|++.++...+++++|+||. +.|||++.+.++++|+++++++.+.|+||+||.+++|++
T Consensus 176 wit~~~~~a~~~iv~a~~~~~~~~~G~s~F~V~~~~~~~~~~~pGv~v~~~~~~~G~~~~~~~~i~fd~V~VP~~~lL~~ 255 (267)
T d2ddha3 176 WPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPRENMLMK 255 (267)
T ss_dssp CCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEESSEEEEGGGBCCS
T ss_pred cCCCCcccCCEEEEeeeccCCCCCCccEEEEEEecCcCccCCCCCeEeccCCCccccCCCceEEEEEeeEEECHHHhCCC
Confidence 9998 68999999999987655566899999994 458999999999999999999999999999999999965
Q ss_pred C
Q 023999 257 E 257 (274)
Q Consensus 257 ~ 257 (274)
-
T Consensus 256 ~ 256 (267)
T d2ddha3 256 Y 256 (267)
T ss_dssp S
T ss_pred c
Confidence 3
No 12
>d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.95 E-value=9.5e-29 Score=211.06 Aligned_cols=214 Identities=19% Similarity=0.288 Sum_probs=154.3
Q ss_pred CHHHHHHHHHHHHHHHHhhcCcchhchhccCCCCCcHHHHHHHHhcCCcCCCCCccCCCCCCCHHHHHHHHHHHHhhcCc
Q 023999 32 FDDTQLQFKESVGQFARENIAPRAANIDQSNSFPQDVNLWKLMGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGS 111 (274)
Q Consensus 32 s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~l~vPe~~GG~g~~~~~~~~v~e~lg~~~~~ 111 (274)
++++. ++++.+++++.+. |.....+.. .... .+.|....+.+........++ +.+..+...+...+.. +
T Consensus 27 ~ee~~-~~r~~v~~~~~~d--p~f~~~~~~-~~sr-~e~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~---~ 95 (271)
T d1w07a3 27 SRHAF-EVSDRIARLVASD--PVFEKSNRA-RLSR-KELFKSTLRKCAHAFKRIIEL---RLNEEEAGRLRHFIDQ---P 95 (271)
T ss_dssp SHHHH-HHHHHHHHHHHTC--GGGCCTTTT-SSCH-HHHHHHHHHHHHHHHHHHHHT---TCCHHHHHHHHHHHCC---C
T ss_pred CHHHH-HHHHHHHHHHhcC--cccCCCCcC-CCCH-HHHHHHHHHHHHHHHHHHHHc---CCChhhhHHHHHHhcc---c
Confidence 46666 8899999998764 222111111 1110 133333222211111111222 2234444443333322 2
Q ss_pred chhhhhhhhHHHHHHHHhcCCHHHHHHHhHHHhcCCceEEEEeeCCCCCCCCCCceEEEEEe--CCeEEEee-----Eee
Q 023999 112 VGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRV--DGGYIING-----NKM 184 (274)
Q Consensus 112 ~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~~~~~a~~~--~~g~~l~G-----~k~ 184 (274)
..+..|..+....|..+|+++||++|||++++|++++|+|+|||++|+|+.+++|+|+++ +++|+||| +|.
T Consensus 96 --~~~~vh~~~~~~~i~~~Gt~eQk~~~Lp~l~~G~~~~~~a~TEp~~GSd~~~l~T~A~~d~~gd~~vlng~k~~~~K~ 173 (271)
T d1w07a3 96 --AYVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKW 173 (271)
T ss_dssp --CHHHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEE
T ss_pred --hHHHHHHHhhHHHHHhhCCHHHHHHhhHHHhCCCeEEEecccCCccccCcccccceeeecCCCceeeecccccceeee
Confidence 234555556677889999999999999999999999999999999999999999999987 56799999 799
Q ss_pred cccC-CCCCCEEEEEEEeCCCCCCCCeEEEEEe-------CCCCCeEEeccCcccC---CCCCceeeEEeceeeeCCCCc
Q 023999 185 WCTN-GPVAQTLVVYAKTDIKAGSKGITAFIIE-------KGMPGFSTAQKLDKLG---MRGSDTCELVFENCFVPNENV 253 (274)
Q Consensus 185 ~vs~-~~~a~~~lv~a~~~~~~~~~~~~~~lv~-------~~~~gv~~~~~~~~~G---l~~~~~~~v~f~~v~Vp~~~l 253 (274)
|++| +..|++++|+|+..++.++.++.+|+|| .+.|||++.+..+++| +++.+++.+.|+||+||.+++
T Consensus 174 wi~~~g~~a~~~vv~a~~~~~~~~~g~~~flV~~~~~~~~~~~pGv~v~~~~~k~G~~~~~~~~~~~i~Fd~VrVP~~~l 253 (271)
T d1w07a3 174 WPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQM 253 (271)
T ss_dssp CCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGB
T ss_pred ccCCchhhhhhhheeeeecCCCCCCCEEEEEEeccccCCCCCCCceEEcccccccCccccCCCceEEEEEeeEEECHHHc
Confidence 9998 6789999999998766556678999999 4458999988888887 678889999999999999999
Q ss_pred ccCCC
Q 023999 254 LGQEG 258 (274)
Q Consensus 254 lg~~g 258 (274)
||+.+
T Consensus 254 Lg~~g 258 (271)
T d1w07a3 254 LMRLS 258 (271)
T ss_dssp CCSSE
T ss_pred CCCCC
Confidence 99876
No 13
>d1u8va2 e.6.1.1 (A:1-275) 4-hydroxybutyryl-CoA dehydratase AbfD, NM domains {Clostridium aminobutyricum [TaxId: 33953]}
Probab=99.82 E-value=1e-21 Score=167.46 Aligned_cols=130 Identities=15% Similarity=0.264 Sum_probs=108.9
Q ss_pred HHHHhcCCH--HHHHHHhHHHhcCCceEEEEeeCCCCCCCCCC--------ceEEEEEeCCeEEEeeEeecccCCCCCCE
Q 023999 125 NQLVRHGSP--AQKDKYLPKLISGEHVGALAMSEPNAGSDVVG--------MKCKADRVDGGYIINGNKMWCTNGPVAQT 194 (274)
Q Consensus 125 ~~l~~~g~~--~q~~~~l~~~~~G~~~~~~a~te~~~g~d~~~--------~~~~a~~~~~g~~l~G~k~~vs~~~~a~~ 194 (274)
.++..++++ +++++|++.+.++++..+.+++||..+++... ..+.+++++|||+|||.|.|+|++..||+
T Consensus 118 ~~~~~~g~~~~e~~~~yl~~~~~~dl~~t~altePq~dr~~~~~~q~~~~~~~~v~~~~~~g~vvnG~K~~~T~a~~ad~ 197 (275)
T d1u8va2 118 EIDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLRIVEKREDGIVVRGAKAHQTGSINSHE 197 (275)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCEEEEECSSEEEEEEEECSCTTCTTCSE
T ss_pred HHhhhhCcHHHHHHHHHHHHHHhCCeEEEEeeecCCCCCccChhhccCccceEEEEEecCCEEEEeeEEEEecCCCccce
Confidence 455677876 78899999999999999999999999988653 23567778899999999999999999999
Q ss_pred EEEEEEeCCCCC-CCCeEEEEEeCCCCCeEEeccCcccCCCCCce---------------eeEEeceeeeCCCCcc
Q 023999 195 LVVYAKTDIKAG-SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT---------------CELVFENCFVPNENVL 254 (274)
Q Consensus 195 ~lv~a~~~~~~~-~~~~~~~lv~~~~~gv~~~~~~~~~Gl~~~~~---------------~~v~f~~v~Vp~~~ll 254 (274)
++|+++....++ .++.++|+||.++||+++...++.+|++.+.+ +.|.|+||+||.++++
T Consensus 198 ~~v~~~~~~~~~~~~~~~~f~Vp~~tpGv~~~~~~~~~~~r~~~~~~~~~~~s~~f~e~da~vvFddV~VP~e~Vf 273 (275)
T d1u8va2 198 HIIMPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIF 273 (275)
T ss_dssp EEECCSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEE
T ss_pred EEEEeccCCCCCCCCcEEEEEEeCCCCCeEEecccCCcCCcccCCCCCccccccccCCceeEEEeceEECcHHHee
Confidence 999998754433 34677899999999999988888888775443 4599999999998875
No 14
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=38.02 E-value=37 Score=20.27 Aligned_cols=52 Identities=17% Similarity=0.194 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhh-cCcchhchhccCCCC-C--cHHHHHHHHhcCCcCC
Q 023999 30 LLFDDTQLQFKESVGQFAREN-IAPRAANIDQSNSFP-Q--DVNLWKLMGNFNLHGI 82 (274)
Q Consensus 30 ~~s~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~-~--~~~~~~~l~~~G~~~l 82 (274)
.||+.|+ .+.+-+++|..+. +.|..+++-..=.+. . ....++.|.+.||..-
T Consensus 2 ~LT~rQ~-~vL~~I~~~~~~~G~~Ps~rei~~~~g~~S~stv~~~l~~Le~kG~I~r 57 (71)
T d1jhfa1 2 ALTARQQ-EVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEI 57 (71)
T ss_dssp CCCHHHH-HHHHHHHHHHHHHSSCCCHHHHHHHTTCSSHHHHHHHHHHHHHTTSEEE
T ss_pred CCCHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHCcCeec
Confidence 5899999 9999999998775 456666654443332 1 2356778888898654
No 15
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=28.61 E-value=52 Score=19.12 Aligned_cols=48 Identities=8% Similarity=0.076 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHHHHHHhh-c-CcchhchhccCCCCC--cHHHHHHHHhcCC
Q 023999 31 LFDDTQLQFKESVGQFAREN-I-APRAANIDQSNSFPQ--DVNLWKLMGNFNL 79 (274)
Q Consensus 31 ~s~~~~~~l~~~~~~~~~~~-~-~~~~~~~~~~~~~~~--~~~~~~~l~~~G~ 79 (274)
+|++|+ .+++.+...+.+. + .|..++.-..-..+. .+++.+.+.+.|.
T Consensus 1 ls~~q~-~l~~~I~~~~~~~g~~PP~vrdl~~~l~~~e~~~~~lL~~l~~~G~ 52 (64)
T d1lvaa3 1 FSETQK-KLLKDLEDKYRVSRWQPPSFKEVAGSFNLDPSELEELLHYLVREGV 52 (64)
T ss_dssp CCHHHH-HHHHHHHHHHHHHTTSCCBHHHHHHHTTCCHHHHHHHHHHHHHTTS
T ss_pred CCHHHH-HHHHHHHHHHHHcCCCCCcHHHHHHHhCCCHHHHHHHHHHHHHCCC
Confidence 578888 8888888877543 2 333444332222332 2356666666664
Done!