BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024000
(274 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RX88|FACE1_ARATH CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1
PE=1 SV=1
Length = 424
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/273 (86%), Positives = 250/273 (91%)
Query: 1 MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKS 60
M P+ME VVGFMI+MY FETYLDLRQ ALKLP LPKTL GVISQEKFEKSR YSLDKS
Sbjct: 1 MAIPFMETVVGFMIVMYIFETYLDLRQLTALKLPTLPKTLVGVISQEKFEKSRAYSLDKS 60
Query: 61 HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
+FHFVHEFVTILMDSAIL F ILPWFWK SG L +GLD ENEILHTLSFLAGVM WSQ
Sbjct: 61 YFHFVHEFVTILMDSAILFFGILPWFWKMSGAVLPRLGLDPENEILHTLSFLAGVMTWSQ 120
Query: 121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
+TDLPFSLYSTFVIE+RHGFNKQTIW+F RDMIKG L+++LGPPIV+AII IVQKGGPY
Sbjct: 121 ITDLPFSLYSTFVIESRHGFNKQTIWMFIRDMIKGTFLSVILGPPIVAAIIFIVQKGGPY 180
Query: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
LAIYLWAFMF+LSLVMMT+YPVLIAPLFNKFTPLP+G+LREKIEKLASSLKFPLKKLFVV
Sbjct: 181 LAIYLWAFMFILSLVMMTIYPVLIAPLFNKFTPLPDGDLREKIEKLASSLKFPLKKLFVV 240
Query: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQVK 273
DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQ K
Sbjct: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCK 273
>sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica
GN=FACE1 PE=2 SV=1
Length = 425
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/273 (81%), Positives = 244/273 (89%)
Query: 1 MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKS 60
M PY+EAV+ FMILMY FETYLD+RQH ALKLP LPK L GVIS EKFE+SR YSLDKS
Sbjct: 1 MALPYLEAVLCFMILMYIFETYLDIRQHRALKLPTLPKPLVGVISGEKFERSRAYSLDKS 60
Query: 61 HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
FHF+HE VTILMD+ IL +R+LPW WKKSG GL+AENEILHTL+FLAGVM+WSQ
Sbjct: 61 KFHFIHEAVTILMDTTILYYRVLPWVWKKSGELATNAGLNAENEILHTLAFLAGVMIWSQ 120
Query: 121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
+TDLPFSLYSTFVIEA+HGFNKQTIWLF RDMIKG++L+I+LGPPIV+AIIIIVQ GGPY
Sbjct: 121 ITDLPFSLYSTFVIEAKHGFNKQTIWLFIRDMIKGILLSILLGPPIVAAIIIIVQNGGPY 180
Query: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
LAIYLW FMF LSLVMMT+YP++IAPLFNKFTPLPEG LREKIEKLA+SL FPLKKLFVV
Sbjct: 181 LAIYLWGFMFALSLVMMTIYPIVIAPLFNKFTPLPEGVLREKIEKLAASLSFPLKKLFVV 240
Query: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQVK 273
DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQ
Sbjct: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCS 273
>sp|Q80W54|FACE1_MOUSE CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1
SV=2
Length = 475
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 178/265 (67%), Gaps = 1/265 (0%)
Query: 8 AVVGFMILMYFFETYLDLRQHAALKLP-KLPKTLEGVISQEKFEKSRGYSLDKSHFHFVH 66
AV+ F +Y +ET+L RQ K ++P LE ++ + FEKSR Y LDKS F F
Sbjct: 22 AVLLFSWTVYLWETFLAQRQRRIYKTTTRVPAELEQIMDSDTFEKSRLYQLDKSTFSFWS 81
Query: 67 EFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPF 126
+ + + ILLF +P+ W+ SG F G E EI+ +L FL L+S LT LP+
Sbjct: 82 GLYSEVEGTFILLFGGIPYLWRLSGQFCSSAGFGPEYEIIQSLVFLLLATLFSALTGLPW 141
Query: 127 SLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLW 186
SLY+TFVIE +HGFN QT+ F +D IK I+ + P+ + ++ I++ GG Y IY W
Sbjct: 142 SLYNTFVIEEKHGFNHQTLEFFMKDAIKKFIVTQCILLPVSALLLYIIKIGGDYFFIYAW 201
Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRS 246
F V+SLV++T+Y IAPLF+KFTPLPEG+L+++IE +A S+ FPL K++VV+GS RS
Sbjct: 202 LFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKQEIEVMAKSIDFPLTKVYVVEGSKRS 261
Query: 247 SHSNAYMYGFFKNKRIVLYDTLIQQ 271
SHSNAY YGFFKNKRIVL+DTL+++
Sbjct: 262 SHSNAYFYGFFKNKRIVLFDTLLEE 286
>sp|O75844|FACE1_HUMAN CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1
SV=2
Length = 475
Score = 244 bits (624), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/265 (49%), Positives = 175/265 (66%), Gaps = 1/265 (0%)
Query: 8 AVVGFMILMYFFETYLDLRQHAALKLPK-LPKTLEGVISQEKFEKSRGYSLDKSHFHFVH 66
AV+ F +Y +ET+L RQ K +P L ++ E FEKSR Y LDKS F F
Sbjct: 22 AVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWS 81
Query: 67 EFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPF 126
+ + ILLF +P+ W+ SG F G E EI +L FL L+S LT LP+
Sbjct: 82 GLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALTGLPW 141
Query: 127 SLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLW 186
SLY+TFVIE +HGFN+QT+ F +D IK ++ + P+ S ++ I++ GG Y IY W
Sbjct: 142 SLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAW 201
Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRS 246
F V+SLV++T+Y IAPLF+KFTPLPEG+L+E+IE +A S+ FPL K++VV+GS RS
Sbjct: 202 LFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRS 261
Query: 247 SHSNAYMYGFFKNKRIVLYDTLIQQ 271
SHSNAY YGFFKNKRIVL+DTL+++
Sbjct: 262 SHSNAYFYGFFKNKRIVLFDTLLEE 286
>sp|Q10071|STE24_SCHPO Probable CAAX prenyl protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC3H1.05 PE=3 SV=1
Length = 474
Score = 185 bits (469), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 8/276 (2%)
Query: 3 FPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHF 62
FP+ + GF I Y ++ YL RQ L K P L + ++K++K+ Y+ DKS F
Sbjct: 46 FPWKIVIAGFSIGKYAWDLYLRRRQVPYLLREKPPAILAEHVDEKKYQKALSYARDKSWF 105
Query: 63 HFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENE-------ILHTLSFLAGV 115
+ T+ +D I+ + L + W + F + L A + I H+ F+ G+
Sbjct: 106 STIVSTFTLAVDLLIIKYDGLSYLWNIT-KFPWMDKLAASSSRFSLSTSITHSCVFMFGL 164
Query: 116 MLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQ 175
L+S+L +PF+LYSTFVIE ++GFNK T+ +F D++K + L +L +V + I+
Sbjct: 165 TLFSRLIQIPFNLYSTFVIEEKYGFNKSTLKIFVIDLLKELSLGGLLMSVVVGVFVKILT 224
Query: 176 KGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLK 235
K G +Y W V L++ T+ P LI PLF KFTPL G LR +IE+LA+S+ FPLK
Sbjct: 225 KFGDNFIMYAWGAYIVFGLILQTIAPSLIMPLFYKFTPLENGSLRTQIEELAASINFPLK 284
Query: 236 KLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQ 271
KL+V+D S RS+HSNA+ YG NK IVL+DTL++
Sbjct: 285 KLYVIDASRRSTHSNAFFYGLPWNKGIVLFDTLVKN 320
>sp|Q54FH7|FACE1_DICDI CAAX prenyl protease 1 homolog OS=Dictyostelium discoideum
GN=zmpste24 PE=3 SV=1
Length = 426
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 152/266 (57%), Gaps = 6/266 (2%)
Query: 10 VGFMILMYFFETYLDLRQHAALK-LPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEF 68
+ F +L +F+ YL+ RQ LK L K+P+ + I+QE F+KS+ YS K + +
Sbjct: 9 ISFFLLEHFYSFYLNFRQSKLLKNLTKVPEYCKDRITQEDFKKSQEYSKAKLDYKTLTST 68
Query: 69 VTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSL 128
+ +L + + P+FW S +G NEI+ + F A + S +T++PFS
Sbjct: 69 IQVLTTLLSFYYPVYPYFWNLSLELAEKIGY--PNEIIRSCFFFAFTVGVSVITEIPFSY 126
Query: 129 YSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAF 188
Y F++E + G+N+ T LF +D I +L I G PI+S I I+ GP L Y W
Sbjct: 127 YYQFILEEKFGYNRMTRTLFIKDKIISTLLMIGFGLPILSLAIFIINWSGPQLWFYCWLL 186
Query: 189 MFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKK--LFVVDGSTRS 246
+ ++L+ +T+YP I PLFNKFTP+ +GEL E I LA + FP K +FVVD S R
Sbjct: 187 LVAITLLSITIYPTFIQPLFNKFTPV-DGELAESIFALAKRVGFPASKDTIFVVDNSKRD 245
Query: 247 SHSNAYMYGFFKNKRIVLYDTLIQQV 272
H NAY YG F KRIVLYDTL+ ++
Sbjct: 246 GHMNAYFYGLFGTKRIVLYDTLVNEL 271
>sp|P47154|STE24_YEAST CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STE24 PE=1 SV=1
Length = 453
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 154/272 (56%), Gaps = 4/272 (1%)
Query: 4 PYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFH 63
P+ + GF I + FE+YL RQ+ L KLP LE I E F KSR YS K+ F
Sbjct: 14 PWKLIISGFSIAQFSFESYLTYRQYQKLSETKLPPVLEDEIDDETFHKSRNYSRAKAKFS 73
Query: 64 FVHEFVTILMDSAILLFRILPWFWKKSG---NFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
+ + + + + P W + N ++ V + + +L FL + S
Sbjct: 74 IFGDVYNLAQKLVFIKYDLFPKIWHMAVSLLNAVLPVRFHMVSTVAQSLCFLGLLSSLST 133
Query: 121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
L DLP S YS FV+E + GFNK T+ L+ DMIK + LA +G PI+ + I K
Sbjct: 134 LVDLPLSYYSHFVLEEKFGFNKLTVQLWITDMIKSLTLAYAIGGPILYLFLKIFDKFPTD 193
Query: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
Y+ F+FV+ ++ MT+ PV I P+FNKFTPL +GEL++ IE LA + FPL K+FV+
Sbjct: 194 FLWYIMVFLFVVQILAMTIIPVFIMPMFNKFTPLEDGELKKSIESLADRVGFPLDKIFVI 253
Query: 241 DGSTRSSHSNAYMYGF-FKNKRIVLYDTLIQQ 271
DGS RSSHSNAY G F +KRIVL+DTL+
Sbjct: 254 DGSKRSSHSNAYFTGLPFTSKRIVLFDTLVNS 285
>sp|P40769|YHFN_BACSU Uncharacterized metalloprotease YhfN OS=Bacillus subtilis (strain
168) GN=yhfN PE=3 SV=2
Length = 426
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 106 LHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPP 165
L T+ F+ + L + L LP + + + + + QT + +D + ++ +
Sbjct: 101 LQTVGFVFVLSLITTLVTLPLD-WIGYQVSLDYNISTQTTASWAKDQVISFWISFPIFTL 159
Query: 166 IVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEK 225
V ++++ +Y W SL + + PV+I PL+N F PL EL KI +
Sbjct: 160 CVLVFYWLIKRHEKKWWLYAWLLTVPFSLFLFFIQPVIIDPLYNDFYPLKNKELESKILE 219
Query: 226 LASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQVK 273
LA P ++ V+ S +++ NAY+ G NKRIVL+DT + ++
Sbjct: 220 LADEANIPADHVYEVNMSEKTNALNAYVTGIGANKRIVLWDTTLNKLD 267
>sp|O13356|CHS1_CRYNH Chitin synthase 1 OS=Cryptococcus neoformans var. grubii serotype A
(strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
GN=CHS1 PE=3 SV=2
Length = 1236
Score = 32.7 bits (73), Expect = 2.6, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 149 FRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMT-LYPVLIAPL 207
F + I M+LAIVLG P + +I+I + Y+A W +++L+L + + PV
Sbjct: 858 FEEAIPLMLLAIVLGLPAI--LILITTRKVVYVA---WMLVYLLALPIWNFVLPVYSFWH 912
Query: 208 FNKF----TPLPEGELREK 222
F+ F T EGE+R K
Sbjct: 913 FDDFSWGETRRVEGEIRSK 931
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.144 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,175,956
Number of Sequences: 539616
Number of extensions: 3950945
Number of successful extensions: 11628
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 11612
Number of HSP's gapped (non-prelim): 20
length of query: 274
length of database: 191,569,459
effective HSP length: 116
effective length of query: 158
effective length of database: 128,974,003
effective search space: 20377892474
effective search space used: 20377892474
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)