Query 024003
Match_columns 274
No_of_seqs 267 out of 1647
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 08:13:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024003.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024003hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0546 Gph Predicted phosphat 100.0 1.4E-40 3.1E-45 292.1 21.4 207 2-273 4-217 (220)
2 PRK13226 phosphoglycolate phos 100.0 5.7E-36 1.2E-40 264.2 18.2 206 1-273 11-224 (229)
3 PRK13288 pyrophosphatase PpaX; 100.0 3.7E-34 8E-39 249.3 19.8 201 2-273 3-210 (214)
4 TIGR01449 PGP_bact 2-phosphogl 100.0 5E-34 1.1E-38 247.2 18.5 206 5-273 1-213 (213)
5 TIGR01422 phosphonatase phosph 100.0 1.3E-33 2.8E-38 252.2 20.1 215 3-273 3-252 (253)
6 PLN02770 haloacid dehalogenase 100.0 3.1E-33 6.7E-38 249.8 21.4 202 2-269 22-231 (248)
7 TIGR03351 PhnX-like phosphonat 100.0 1.4E-32 3E-37 240.0 21.6 206 3-273 2-219 (220)
8 TIGR01454 AHBA_synth_RP 3-amin 100.0 8.3E-33 1.8E-37 239.2 19.6 196 5-273 1-203 (205)
9 PRK13478 phosphonoacetaldehyde 100.0 1.1E-32 2.3E-37 248.5 20.1 215 3-273 5-254 (267)
10 PRK13225 phosphoglycolate phos 100.0 3.1E-32 6.7E-37 247.0 21.4 200 3-272 63-266 (273)
11 PRK13223 phosphoglycolate phos 100.0 3.6E-32 7.8E-37 246.3 21.0 209 1-271 12-227 (272)
12 PLN03243 haloacid dehalogenase 100.0 5.6E-32 1.2E-36 243.7 18.4 200 3-271 25-232 (260)
13 PRK11587 putative phosphatase; 100.0 6.2E-31 1.3E-35 230.1 19.5 194 3-270 4-204 (218)
14 PLN02575 haloacid dehalogenase 100.0 8.5E-31 1.8E-35 246.1 19.3 199 3-270 132-338 (381)
15 PRK13222 phosphoglycolate phos 100.0 3.3E-30 7.1E-35 224.9 21.1 208 3-273 7-221 (226)
16 PLN02779 haloacid dehalogenase 100.0 4.7E-30 1E-34 234.1 18.1 217 3-269 41-268 (286)
17 PRK10826 2-deoxyglucose-6-phos 100.0 2.4E-29 5.2E-34 220.3 18.8 205 1-271 6-217 (222)
18 PLN02940 riboflavin kinase 100.0 4.4E-29 9.6E-34 236.2 18.6 199 3-270 12-217 (382)
19 PRK06698 bifunctional 5'-methy 100.0 7.9E-29 1.7E-33 239.6 18.0 207 1-273 240-453 (459)
20 TIGR02253 CTE7 HAD superfamily 100.0 1.9E-28 4.1E-33 213.5 17.6 121 143-269 92-220 (221)
21 PRK10563 6-phosphogluconate ph 100.0 2.3E-28 5E-33 213.6 16.5 200 3-272 5-211 (221)
22 PRK10725 fructose-1-P/6-phosph 100.0 3.5E-28 7.6E-33 206.8 16.3 175 3-243 6-186 (188)
23 TIGR01990 bPGM beta-phosphoglu 100.0 4.9E-28 1.1E-32 205.0 17.1 178 4-243 1-185 (185)
24 PRK09449 dUMP phosphatase; Pro 100.0 5.4E-28 1.2E-32 211.5 17.8 122 143-274 93-223 (224)
25 PHA02597 30.2 hypothetical pro 100.0 2.7E-28 5.8E-33 209.8 14.2 117 142-271 71-196 (197)
26 TIGR02254 YjjG/YfnB HAD superf 100.0 2.1E-27 4.6E-32 206.7 18.5 121 143-273 95-224 (224)
27 TIGR02009 PGMB-YQAB-SF beta-ph 100.0 1.8E-27 3.8E-32 201.6 17.2 177 3-242 2-185 (185)
28 PRK10748 flavin mononucleotide 100.0 3.1E-27 6.7E-32 209.8 17.1 221 3-273 11-238 (238)
29 PLN02919 haloacid dehalogenase 99.9 2.1E-26 4.5E-31 241.3 20.4 202 3-269 76-285 (1057)
30 TIGR01993 Pyr-5-nucltdase pyri 99.9 3.9E-26 8.4E-31 194.3 14.0 95 143-242 82-184 (184)
31 COG0637 Predicted phosphatase/ 99.9 1.2E-25 2.7E-30 197.8 17.6 205 1-271 1-214 (221)
32 PLN02811 hydrolase 99.9 1.5E-25 3.4E-30 196.3 17.9 194 9-270 1-207 (220)
33 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 5.5E-26 1.2E-30 195.7 14.7 85 145-230 106-196 (197)
34 PRK14988 GMP/IMP nucleotidase; 99.9 9E-26 1.9E-30 198.9 14.7 104 142-250 90-201 (224)
35 TIGR02252 DREG-2 REG-2-like, H 99.9 2.7E-25 5.9E-30 191.6 16.0 92 144-241 104-203 (203)
36 TIGR01428 HAD_type_II 2-haloal 99.9 3.1E-24 6.7E-29 184.5 16.5 97 144-245 91-194 (198)
37 TIGR02247 HAD-1A3-hyp Epoxide 99.9 9.8E-25 2.1E-29 189.4 11.7 107 143-254 92-207 (211)
38 PF13419 HAD_2: Haloacid dehal 99.9 1.5E-24 3.2E-29 179.6 11.6 95 143-242 75-176 (176)
39 TIGR01672 AphA HAD superfamily 99.9 2.1E-24 4.5E-29 191.8 13.3 99 141-249 110-217 (237)
40 TIGR01549 HAD-SF-IA-v1 haloaci 99.9 1.3E-22 2.8E-27 167.4 14.6 85 143-230 62-152 (154)
41 PRK09456 ?-D-glucose-1-phospha 99.9 2.4E-22 5.3E-27 173.4 15.6 106 144-253 83-195 (199)
42 PLN02954 phosphoserine phospha 99.9 1.3E-21 2.9E-26 171.0 18.1 120 144-273 83-223 (224)
43 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 5.2E-22 1.1E-26 167.2 14.0 93 144-242 84-183 (183)
44 PRK08942 D,D-heptose 1,7-bisph 99.9 5.9E-22 1.3E-26 168.8 12.9 122 144-273 28-176 (181)
45 TIGR01493 HAD-SF-IA-v2 Haloaci 99.9 2.5E-22 5.5E-27 169.0 10.3 83 143-230 88-174 (175)
46 TIGR01685 MDP-1 magnesium-depe 99.8 3.7E-21 8.1E-26 163.5 10.3 105 143-252 43-166 (174)
47 TIGR00338 serB phosphoserine p 99.8 1.7E-19 3.6E-24 157.2 18.8 117 144-273 84-219 (219)
48 COG1011 Predicted hydrolase (H 99.8 1.8E-19 3.9E-24 157.2 18.8 123 143-273 97-226 (229)
49 PRK13582 thrH phosphoserine ph 99.8 3.9E-20 8.5E-25 159.5 13.4 117 143-273 66-195 (205)
50 PRK06769 hypothetical protein; 99.8 1.5E-20 3.3E-25 159.5 10.2 123 144-273 27-171 (173)
51 PRK11009 aphA acid phosphatase 99.8 4.7E-20 1E-24 163.9 12.5 107 138-256 107-225 (237)
52 TIGR00213 GmhB_yaeD D,D-heptos 99.8 4.6E-20 1E-24 156.6 11.9 117 144-270 25-175 (176)
53 PRK09552 mtnX 2-hydroxy-3-keto 99.8 4.5E-20 9.6E-25 161.7 12.1 120 143-273 72-212 (219)
54 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 4.9E-20 1.1E-24 148.8 9.5 95 144-243 24-131 (132)
55 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 1.1E-19 2.4E-24 155.5 11.6 94 144-242 79-189 (201)
56 TIGR01656 Histidinol-ppas hist 99.8 2.7E-19 5.9E-24 147.7 10.9 97 144-245 26-147 (147)
57 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.8 4.4E-19 9.6E-24 159.5 8.9 125 144-273 119-254 (257)
58 TIGR01664 DNA-3'-Pase DNA 3'-p 99.8 2.4E-18 5.2E-23 145.3 9.2 90 145-241 42-160 (166)
59 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 6.1E-17 1.3E-21 136.9 14.4 83 144-230 71-180 (188)
60 TIGR01261 hisB_Nterm histidino 99.7 9.7E-18 2.1E-22 140.9 8.9 99 143-248 27-152 (161)
61 KOG2914 Predicted haloacid-hal 99.7 2.8E-16 6.2E-21 138.1 16.6 198 3-270 11-219 (222)
62 TIGR01691 enolase-ppase 2,3-di 99.7 9.1E-17 2E-21 141.5 12.6 111 132-248 83-201 (220)
63 PRK05446 imidazole glycerol-ph 99.7 1.6E-16 3.5E-21 148.7 13.9 94 144-244 29-149 (354)
64 TIGR01668 YqeG_hyp_ppase HAD s 99.7 8.7E-17 1.9E-21 136.1 9.5 100 144-253 42-146 (170)
65 PHA02530 pseT polynucleotide k 99.7 7.3E-17 1.6E-21 147.3 9.0 97 144-245 186-298 (300)
66 PRK11590 hypothetical protein; 99.7 1.7E-15 3.6E-20 132.3 16.1 171 3-230 7-194 (211)
67 TIGR01452 PGP_euk phosphoglyco 99.7 2.9E-17 6.4E-22 149.2 4.2 120 144-269 142-279 (279)
68 PRK10444 UMP phosphatase; Prov 99.7 1.3E-16 2.7E-21 143.1 7.5 71 195-269 174-245 (248)
69 PRK11133 serB phosphoserine ph 99.7 4.2E-15 9E-20 137.9 17.3 101 144-254 180-297 (322)
70 TIGR02137 HSK-PSP phosphoserin 99.6 1.4E-14 3E-19 126.2 17.4 89 144-240 67-168 (203)
71 TIGR03333 salvage_mtnX 2-hydro 99.6 1.4E-15 3.1E-20 132.8 11.2 121 144-274 69-209 (214)
72 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 2E-14 4.3E-19 123.6 15.6 112 115-240 66-195 (202)
73 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.6 9E-16 1.9E-20 137.4 5.8 120 144-269 120-249 (249)
74 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 3.7E-15 8.1E-20 120.5 6.5 85 145-230 29-126 (128)
75 KOG3085 Predicted hydrolase (H 99.6 4E-14 8.7E-19 125.2 12.5 95 143-243 111-213 (237)
76 PF00702 Hydrolase: haloacid d 99.6 3E-14 6.4E-19 122.4 11.3 84 143-230 125-213 (215)
77 TIGR01488 HAD-SF-IB Haloacid D 99.5 4.4E-14 9.5E-19 118.6 10.8 86 144-230 72-176 (177)
78 smart00577 CPDc catalytic doma 99.5 7E-15 1.5E-19 121.7 5.4 91 143-239 43-138 (148)
79 PF13242 Hydrolase_like: HAD-h 99.5 1.4E-14 3E-19 106.3 6.3 71 195-269 4-75 (75)
80 PLN02645 phosphoglycolate phos 99.5 1.3E-14 2.9E-19 133.9 5.0 111 158-273 186-307 (311)
81 TIGR01670 YrbI-phosphatas 3-de 99.5 1E-13 2.2E-18 115.5 7.3 101 150-267 36-136 (154)
82 TIGR01663 PNK-3'Pase polynucle 99.5 1.9E-13 4.1E-18 133.9 9.5 83 145-230 197-302 (526)
83 PRK09484 3-deoxy-D-manno-octul 99.4 8.6E-13 1.9E-17 112.9 9.9 104 152-272 58-167 (183)
84 TIGR02726 phenyl_P_delta pheny 99.4 4.1E-13 9E-18 113.7 7.3 90 152-255 44-133 (169)
85 PRK10530 pyridoxal phosphate ( 99.4 1.2E-12 2.6E-17 117.4 10.5 107 145-265 137-257 (272)
86 COG0560 SerB Phosphoserine pho 99.4 9.2E-12 2E-16 109.2 15.2 86 144-230 76-178 (212)
87 cd01427 HAD_like Haloacid deha 99.4 3.2E-12 6.9E-17 100.7 9.7 95 143-242 22-139 (139)
88 PRK08238 hypothetical protein; 99.4 1.6E-11 3.5E-16 119.5 15.0 108 145-267 72-188 (479)
89 TIGR01686 FkbH FkbH-like domai 99.3 2.3E-12 4.9E-17 119.5 8.5 86 143-230 29-121 (320)
90 TIGR01545 YfhB_g-proteo haloac 99.3 5.5E-11 1.2E-15 104.1 16.1 106 115-230 72-193 (210)
91 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.3 1.7E-12 3.7E-17 115.5 3.1 92 146-243 139-241 (242)
92 TIGR01512 ATPase-IB2_Cd heavy 99.2 3.4E-11 7.4E-16 119.0 9.5 116 140-273 357-478 (536)
93 TIGR01525 ATPase-IB_hvy heavy 99.2 3.3E-11 7.2E-16 119.5 9.3 113 141-272 380-498 (556)
94 PF06888 Put_Phosphatase: Puta 99.2 4.7E-10 1E-14 99.7 14.9 108 143-254 69-208 (234)
95 KOG3109 Haloacid dehalogenase- 99.2 9.3E-10 2E-14 95.5 14.3 97 144-245 99-207 (244)
96 TIGR02244 HAD-IG-Ncltidse HAD 99.1 2.1E-10 4.4E-15 107.1 10.2 101 141-244 180-324 (343)
97 TIGR01533 lipo_e_P4 5'-nucleot 99.1 2.1E-09 4.5E-14 97.3 13.4 82 143-229 116-205 (266)
98 PRK00192 mannosyl-3-phosphogly 99.1 6.7E-10 1.5E-14 100.5 9.0 80 156-243 146-233 (273)
99 COG0241 HisB Histidinol phosph 99.0 1.6E-09 3.6E-14 92.4 10.5 117 144-270 30-173 (181)
100 COG2179 Predicted hydrolase of 99.0 1.1E-09 2.3E-14 91.5 8.8 87 147-243 48-138 (175)
101 PF12710 HAD: haloacid dehalog 99.0 5E-09 1.1E-13 88.6 13.1 81 145-229 85-192 (192)
102 TIGR01511 ATPase-IB1_Cu copper 99.0 2.1E-09 4.6E-14 106.9 11.1 108 143-271 403-516 (562)
103 PRK01158 phosphoglycolate phos 99.0 1.5E-09 3.3E-14 95.0 7.8 84 160-254 117-207 (230)
104 PRK10671 copA copper exporting 99.0 2.2E-09 4.8E-14 111.3 9.4 114 143-273 648-764 (834)
105 TIGR01544 HAD-SF-IE haloacid d 98.9 2.5E-08 5.5E-13 90.6 14.4 86 143-229 119-228 (277)
106 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.9 3.1E-09 6.7E-14 94.6 6.4 87 142-230 21-113 (242)
107 PF08645 PNK3P: Polynucleotide 98.9 4.5E-09 9.7E-14 88.2 6.7 87 146-239 30-152 (159)
108 COG0647 NagD Predicted sugar p 98.8 2.2E-08 4.7E-13 90.7 10.5 119 144-273 132-265 (269)
109 TIGR02463 MPGP_rel mannosyl-3- 98.8 3.9E-08 8.4E-13 85.8 11.4 77 157-239 137-218 (221)
110 TIGR02251 HIF-SF_euk Dullard-l 98.8 2.1E-09 4.5E-14 90.4 3.0 92 145-242 42-138 (162)
111 TIGR01482 SPP-subfamily Sucros 98.8 3.3E-09 7.1E-14 92.4 3.9 85 160-255 109-200 (225)
112 KOG3120 Predicted haloacid deh 98.7 1.1E-07 2.5E-12 82.7 9.7 101 144-248 83-215 (256)
113 TIGR01522 ATPase-IIA2_Ca golgi 98.7 9E-08 2E-12 99.9 9.9 117 144-271 527-668 (884)
114 TIGR01460 HAD-SF-IIA Haloacid 98.5 1.2E-07 2.6E-12 84.2 5.5 85 156-245 142-236 (236)
115 PF12689 Acid_PPase: Acid Phos 98.5 8.3E-07 1.8E-11 75.2 9.3 99 143-247 43-155 (169)
116 PRK11033 zntA zinc/cadmium/mer 98.5 9.2E-07 2E-11 90.8 10.7 110 144-272 567-679 (741)
117 TIGR01456 CECR5 HAD-superfamil 98.5 2.7E-07 5.8E-12 85.7 6.2 74 195-273 233-320 (321)
118 PF06941 NT5C: 5' nucleotidase 98.4 4.6E-07 1E-11 77.8 6.3 106 141-272 69-184 (191)
119 COG4996 Predicted phosphatase 98.4 8.9E-07 1.9E-11 71.4 7.2 87 143-230 39-134 (164)
120 KOG2882 p-Nitrophenyl phosphat 98.4 3.5E-06 7.5E-11 76.7 10.8 119 144-273 164-303 (306)
121 PRK10513 sugar phosphate phosp 98.4 2.5E-06 5.4E-11 76.5 9.9 52 196-255 196-247 (270)
122 PRK10976 putative hydrolase; P 98.4 1.6E-06 3.5E-11 77.7 8.4 52 196-255 190-241 (266)
123 KOG1615 Phosphoserine phosphat 98.3 2.1E-05 4.5E-10 67.6 14.3 85 143-230 86-191 (227)
124 TIGR02250 FCP1_euk FCP1-like p 98.3 1.6E-06 3.4E-11 72.6 6.3 84 142-229 55-144 (156)
125 COG4229 Predicted enolase-phos 98.3 7.2E-06 1.6E-10 69.7 10.2 106 132-243 91-204 (229)
126 PRK15126 thiamin pyrimidine py 98.3 3.4E-06 7.4E-11 76.0 8.5 51 196-254 188-238 (272)
127 TIGR00099 Cof-subfamily Cof su 98.3 2.4E-06 5.2E-11 76.2 7.3 52 196-255 188-239 (256)
128 TIGR02461 osmo_MPG_phos mannos 98.1 8.3E-06 1.8E-10 72.0 8.2 41 196-240 181-223 (225)
129 COG4359 Uncharacterized conser 98.1 1.9E-05 4.1E-10 67.3 9.5 82 144-230 72-177 (220)
130 PLN02887 hydrolase family prot 98.0 7.1E-05 1.5E-09 74.8 13.4 52 196-255 507-558 (580)
131 TIGR01116 ATPase-IIA1_Ca sarco 98.0 2.7E-05 5.8E-10 81.9 10.4 113 144-271 536-680 (917)
132 COG0561 Cof Predicted hydrolas 98.0 1.8E-05 4E-10 70.8 8.0 52 196-255 189-240 (264)
133 smart00775 LNS2 LNS2 domain. T 98.0 6.7E-05 1.5E-09 62.7 10.9 89 147-239 29-142 (157)
134 TIGR01486 HAD-SF-IIB-MPGP mann 98.0 2.4E-05 5.3E-10 69.9 8.6 44 196-244 176-221 (256)
135 PRK03669 mannosyl-3-phosphogly 98.0 2.5E-05 5.4E-10 70.5 8.2 35 196-230 187-224 (271)
136 PLN02645 phosphoglycolate phos 98.0 3.6E-05 7.7E-10 71.2 9.3 88 144-241 43-136 (311)
137 PTZ00445 p36-lilke protein; Pr 97.9 3.6E-05 7.7E-10 67.2 7.7 93 146-243 76-205 (219)
138 PF09419 PGP_phosphatase: Mito 97.9 0.00011 2.4E-09 62.2 9.5 92 144-246 58-167 (168)
139 COG1778 Low specificity phosph 97.8 2.9E-05 6.2E-10 64.6 4.5 78 152-239 45-122 (170)
140 TIGR01684 viral_ppase viral ph 97.8 4.2E-05 9.2E-10 69.9 5.6 45 148-193 149-196 (301)
141 PF03767 Acid_phosphat_B: HAD 97.7 5.8E-05 1.3E-09 67.0 5.5 81 144-229 114-209 (229)
142 TIGR01487 SPP-like sucrose-pho 97.6 0.00012 2.7E-09 63.5 6.4 88 159-255 108-198 (215)
143 KOG3040 Predicted sugar phosph 97.6 5.9E-05 1.3E-09 65.5 3.8 71 195-269 181-252 (262)
144 TIGR01675 plant-AP plant acid 97.6 0.001 2.2E-08 59.1 11.2 82 143-229 118-213 (229)
145 PHA03398 viral phosphatase sup 97.6 0.00012 2.7E-09 67.0 5.6 46 147-193 150-198 (303)
146 PRK12702 mannosyl-3-phosphogly 97.5 0.00032 7E-09 64.3 7.2 74 162-241 152-251 (302)
147 PLN02177 glycerol-3-phosphate 97.5 0.0086 1.9E-07 59.0 17.3 101 115-230 89-206 (497)
148 PF05116 S6PP: Sucrose-6F-phos 97.4 0.0023 5E-08 57.3 12.2 48 196-250 165-212 (247)
149 COG4087 Soluble P-type ATPase 97.4 0.0019 4.1E-08 52.3 9.7 116 141-271 26-144 (152)
150 TIGR00685 T6PP trehalose-phosp 97.4 0.00028 6E-09 62.9 5.4 70 196-273 167-239 (244)
151 PRK14502 bifunctional mannosyl 97.3 0.002 4.3E-08 65.3 10.9 41 196-240 613-655 (694)
152 TIGR01680 Veg_Stor_Prot vegeta 97.3 0.0017 3.7E-08 59.0 9.2 81 143-228 143-238 (275)
153 TIGR01485 SPP_plant-cyano sucr 97.2 0.0017 3.8E-08 57.7 8.7 89 156-254 117-218 (249)
154 COG3700 AphA Acid phosphatase 97.2 0.0019 4E-08 55.1 7.9 96 138-242 107-210 (237)
155 PLN02423 phosphomannomutase 97.2 0.0013 2.8E-08 58.8 7.5 68 165-243 152-231 (245)
156 PF05761 5_nucleotid: 5' nucle 97.1 0.0024 5.2E-08 62.1 9.4 94 147-243 185-324 (448)
157 TIGR02471 sucr_syn_bact_C sucr 97.0 0.00095 2.1E-08 58.8 5.0 93 157-260 111-215 (236)
158 PRK14010 potassium-transportin 96.8 0.0072 1.6E-07 61.6 9.4 89 145-248 441-532 (673)
159 TIGR01497 kdpB K+-transporting 96.7 0.0064 1.4E-07 62.0 8.6 88 145-248 446-537 (675)
160 TIGR01484 HAD-SF-IIB HAD-super 96.7 0.002 4.3E-08 55.2 4.0 40 196-239 163-202 (204)
161 PRK01122 potassium-transportin 96.6 0.0077 1.7E-07 61.5 8.5 88 145-248 445-536 (679)
162 COG2503 Predicted secreted aci 96.4 0.025 5.5E-07 50.4 9.5 82 143-229 120-210 (274)
163 COG2217 ZntA Cation transport 96.3 0.018 3.8E-07 59.1 8.6 108 144-270 536-648 (713)
164 PTZ00174 phosphomannomutase; P 96.1 0.0026 5.7E-08 56.7 1.7 40 196-243 188-231 (247)
165 PF13344 Hydrolase_6: Haloacid 95.9 0.026 5.6E-07 43.6 6.2 71 143-221 12-89 (101)
166 TIGR01524 ATPase-IIIB_Mg magne 95.9 0.035 7.6E-07 58.4 8.9 109 144-265 514-644 (867)
167 TIGR01647 ATPase-IIIA_H plasma 95.8 0.042 9E-07 57.0 9.2 106 144-265 441-576 (755)
168 PRK15122 magnesium-transportin 95.8 0.043 9.3E-07 58.0 9.4 108 144-264 549-678 (903)
169 PF11019 DUF2608: Protein of u 95.8 0.058 1.3E-06 48.6 9.0 101 147-248 86-214 (252)
170 TIGR01452 PGP_euk phosphoglyco 95.7 0.078 1.7E-06 48.0 9.5 72 144-221 17-94 (279)
171 PRK10517 magnesium-transportin 95.7 0.046 9.9E-07 57.8 8.9 109 144-265 549-679 (902)
172 TIGR02471 sucr_syn_bact_C sucr 95.4 0.064 1.4E-06 47.1 7.5 34 156-191 28-61 (236)
173 TIGR01523 ATPase-IID_K-Na pota 95.3 0.11 2.4E-06 55.8 10.3 116 144-270 645-795 (1053)
174 TIGR01517 ATPase-IIB_Ca plasma 95.3 0.11 2.5E-06 55.1 10.3 112 145-271 579-719 (941)
175 TIGR01487 SPP-like sucrose-pho 95.2 0.011 2.4E-07 51.2 2.1 29 3-31 2-30 (215)
176 PF03031 NIF: NLI interacting 94.8 0.011 2.5E-07 48.7 1.0 81 144-227 35-121 (159)
177 PF08282 Hydrolase_3: haloacid 94.8 0.029 6.2E-07 48.4 3.5 52 196-255 186-237 (254)
178 TIGR01689 EcbF-BcbF capsule bi 94.8 0.017 3.7E-07 46.6 1.8 15 2-16 1-15 (126)
179 TIGR01106 ATPase-IIC_X-K sodiu 94.6 0.23 4.9E-06 53.2 10.3 38 145-183 568-608 (997)
180 TIGR01681 HAD-SF-IIIC HAD-supe 94.3 0.051 1.1E-06 43.6 3.6 14 3-16 1-14 (128)
181 KOG2630 Enolase-phosphatase E- 94.1 0.33 7.2E-06 43.1 8.6 103 132-242 111-223 (254)
182 PLN02499 glycerol-3-phosphate 94.1 0.52 1.1E-05 46.4 10.7 39 150-193 101-139 (498)
183 TIGR01494 ATPase_P-type ATPase 93.8 0.27 5.8E-06 48.3 8.3 75 144-230 346-424 (499)
184 TIGR01652 ATPase-Plipid phosph 93.7 0.3 6.5E-06 52.6 9.2 39 144-183 630-671 (1057)
185 KOG0207 Cation transport ATPas 93.6 0.39 8.5E-06 50.1 9.1 94 145-254 723-820 (951)
186 PRK00192 mannosyl-3-phosphogly 93.3 0.16 3.5E-06 45.7 5.4 48 144-192 20-70 (273)
187 COG5663 Uncharacterized conser 93.0 0.33 7.2E-06 41.1 6.4 87 148-249 75-167 (194)
188 TIGR01484 HAD-SF-IIB HAD-super 92.8 0.05 1.1E-06 46.5 1.3 28 4-31 1-29 (204)
189 COG0647 NagD Predicted sugar p 92.6 0.53 1.1E-05 42.9 7.7 50 143-192 22-77 (269)
190 PF03031 NIF: NLI interacting 92.4 0.052 1.1E-06 44.7 0.9 16 3-18 1-16 (159)
191 PLN03190 aminophospholipid tra 92.3 0.46 9.9E-06 51.7 8.0 33 144-176 725-760 (1178)
192 COG4030 Uncharacterized protei 92.3 0.95 2.1E-05 40.4 8.6 38 144-182 82-121 (315)
193 TIGR01684 viral_ppase viral ph 92.3 0.078 1.7E-06 48.8 1.9 29 3-31 127-158 (301)
194 TIGR01456 CECR5 HAD-superfamil 92.1 0.099 2.2E-06 48.5 2.4 27 4-31 2-28 (321)
195 PRK09484 3-deoxy-D-manno-octul 92.0 0.072 1.6E-06 45.3 1.3 15 2-16 21-35 (183)
196 cd01427 HAD_like Haloacid deha 91.8 0.063 1.4E-06 41.3 0.6 16 4-19 1-16 (139)
197 PLN02382 probable sucrose-phos 91.8 0.27 5.8E-06 47.5 5.0 52 196-254 175-229 (413)
198 COG0474 MgtA Cation transport 91.7 1.1 2.3E-05 47.8 9.8 91 144-245 546-664 (917)
199 PHA03398 viral phosphatase sup 91.0 0.13 2.8E-06 47.5 1.9 29 3-31 129-160 (303)
200 COG3769 Predicted hydrolase (H 90.9 0.16 3.4E-06 45.0 2.3 71 156-229 146-226 (274)
201 cd04728 ThiG Thiazole synthase 90.9 3.5 7.7E-05 37.0 10.8 96 143-248 102-209 (248)
202 PRK10187 trehalose-6-phosphate 90.8 0.49 1.1E-05 42.8 5.4 67 196-273 174-240 (266)
203 TIGR01670 YrbI-phosphatas 3-de 90.6 0.12 2.5E-06 42.7 1.1 14 3-16 2-15 (154)
204 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.1 0.53 1.1E-05 42.0 5.0 48 144-192 16-69 (249)
205 PRK10187 trehalose-6-phosphate 90.0 0.18 3.9E-06 45.6 1.9 46 170-221 177-222 (266)
206 TIGR00685 T6PP trehalose-phosp 88.4 0.23 4.9E-06 44.1 1.4 33 170-204 170-202 (244)
207 PF12689 Acid_PPase: Acid Phos 87.5 0.32 6.9E-06 41.3 1.6 51 162-221 103-153 (169)
208 smart00577 CPDc catalytic doma 87.4 0.33 7.3E-06 39.7 1.7 17 2-18 2-18 (148)
209 PRK00208 thiG thiazole synthas 87.3 9.1 0.0002 34.5 10.8 96 143-248 102-209 (250)
210 TIGR01458 HAD-SF-IIA-hyp3 HAD- 86.9 0.63 1.4E-05 41.7 3.3 46 145-191 21-72 (257)
211 PRK10444 UMP phosphatase; Prov 86.4 2.2 4.7E-05 38.2 6.5 47 145-191 17-68 (248)
212 PF13344 Hydrolase_6: Haloacid 86.3 0.37 8.1E-06 37.0 1.3 14 5-18 1-14 (101)
213 TIGR01460 HAD-SF-IIA Haloacid 86.1 6.4 0.00014 34.7 9.3 81 143-230 12-98 (236)
214 TIGR02726 phenyl_P_delta pheny 85.9 0.37 8.1E-06 40.7 1.2 52 166-228 82-133 (169)
215 TIGR01657 P-ATPase-V P-type AT 85.4 4.8 0.0001 43.5 9.5 39 144-183 655-696 (1054)
216 COG2216 KdpB High-affinity K+ 84.4 2.1 4.5E-05 42.5 5.6 78 145-230 447-527 (681)
217 TIGR02245 HAD_IIID1 HAD-superf 83.9 0.58 1.3E-05 40.6 1.6 91 148-245 48-156 (195)
218 TIGR02463 MPGP_rel mannosyl-3- 83.7 2.4 5.2E-05 36.5 5.4 36 147-183 18-56 (221)
219 KOG0206 P-type ATPase [General 83.5 13 0.00029 40.4 11.7 35 144-178 650-687 (1151)
220 TIGR01658 EYA-cons_domain eyes 83.5 6.8 0.00015 35.4 8.0 80 159-244 177-258 (274)
221 PLN02205 alpha,alpha-trehalose 83.2 1.1 2.3E-05 47.4 3.4 70 196-273 762-841 (854)
222 KOG2470 Similar to IMP-GMP spe 83.1 1.5 3.2E-05 41.5 3.9 70 156-225 254-359 (510)
223 TIGR02251 HIF-SF_euk Dullard-l 82.5 0.76 1.6E-05 38.3 1.7 17 2-18 1-17 (162)
224 COG1877 OtsB Trehalose-6-phosp 82.3 0.63 1.4E-05 42.3 1.2 99 144-247 121-230 (266)
225 TIGR00213 GmhB_yaeD D,D-heptos 82.3 0.71 1.5E-05 38.7 1.4 13 3-15 2-14 (176)
226 COG3882 FkbH Predicted enzyme 82.2 5.7 0.00012 39.2 7.6 69 156-230 269-345 (574)
227 TIGR02245 HAD_IIID1 HAD-superf 81.7 5 0.00011 34.8 6.5 14 3-16 22-35 (195)
228 KOG0202 Ca2+ transporting ATPa 81.7 5.3 0.00011 41.8 7.5 102 145-254 584-712 (972)
229 PRK14501 putative bifunctional 81.4 1.2 2.7E-05 45.9 3.1 64 196-273 657-720 (726)
230 TIGR02461 osmo_MPG_phos mannos 81.1 3.2 7E-05 36.4 5.3 40 145-185 15-57 (225)
231 KOG2469 IMP-GMP specific 5'-nu 80.8 3.3 7.1E-05 39.8 5.4 84 156-242 212-332 (424)
232 PLN03017 trehalose-phosphatase 80.5 0.99 2.2E-05 42.9 1.9 70 196-273 283-355 (366)
233 PF06189 5-nucleotidase: 5'-nu 80.2 4.5 9.8E-05 36.6 5.8 76 156-248 184-263 (264)
234 PLN02151 trehalose-phosphatase 79.9 1.1 2.3E-05 42.5 1.8 69 196-273 269-341 (354)
235 COG1778 Low specificity phosph 79.8 1 2.2E-05 37.8 1.5 18 1-18 7-24 (170)
236 PRK12702 mannosyl-3-phosphogly 79.5 3.9 8.4E-05 37.9 5.3 42 144-186 17-61 (302)
237 TIGR01261 hisB_Nterm histidino 79.1 1.2 2.5E-05 37.3 1.7 16 3-18 2-17 (161)
238 COG4850 Uncharacterized conser 76.9 11 0.00024 35.4 7.4 82 143-227 194-293 (373)
239 PLN02580 trehalose-phosphatase 76.1 1.4 3E-05 42.2 1.5 69 196-273 301-373 (384)
240 PTZ00174 phosphomannomutase; P 75.8 3.9 8.5E-05 36.2 4.2 29 3-31 6-34 (247)
241 PF02358 Trehalose_PPase: Treh 75.0 2 4.4E-05 37.7 2.2 35 196-230 165-202 (235)
242 KOG2134 Polynucleotide kinase 74.6 1.6 3.5E-05 41.6 1.5 17 3-19 76-92 (422)
243 PRK06769 hypothetical protein; 74.0 2 4.3E-05 36.1 1.7 12 3-14 5-16 (173)
244 PRK11840 bifunctional sulfur c 72.3 47 0.001 31.2 10.4 96 142-247 175-282 (326)
245 TIGR02250 FCP1_euk FCP1-like p 71.1 2.4 5.2E-05 35.2 1.6 18 3-20 7-24 (156)
246 CHL00162 thiG thiamin biosynth 69.4 57 0.0012 29.6 9.9 96 142-247 115-222 (267)
247 PRK14501 putative bifunctional 69.4 7.2 0.00016 40.3 4.9 13 3-15 493-505 (726)
248 PRK10513 sugar phosphate phosp 69.3 13 0.00029 32.8 6.1 39 145-184 20-61 (270)
249 PRK01158 phosphoglycolate phos 69.0 11 0.00023 32.5 5.3 40 145-185 20-62 (230)
250 PF05822 UMPH-1: Pyrimidine 5' 67.3 81 0.0018 28.4 10.5 119 144-268 89-234 (246)
251 TIGR00099 Cof-subfamily Cof su 65.8 13 0.00029 32.6 5.3 40 145-185 16-58 (256)
252 PF05152 DUF705: Protein of un 65.4 14 0.00031 33.9 5.4 47 146-193 143-192 (297)
253 PLN02382 probable sucrose-phos 65.2 3.4 7.5E-05 39.8 1.5 53 166-228 175-230 (413)
254 PRK10530 pyridoxal phosphate ( 64.7 14 0.0003 32.6 5.3 40 145-185 20-62 (272)
255 PF08282 Hydrolase_3: haloacid 64.7 7.7 0.00017 33.1 3.5 39 145-184 15-56 (254)
256 TIGR03609 S_layer_CsaB polysac 64.7 60 0.0013 29.2 9.5 73 157-246 204-279 (298)
257 PRK15126 thiamin pyrimidine py 64.6 13 0.00028 33.1 5.0 40 145-185 19-61 (272)
258 TIGR01486 HAD-SF-IIB-MPGP mann 64.3 15 0.00032 32.5 5.3 39 146-185 17-58 (256)
259 PLN02580 trehalose-phosphatase 64.0 17 0.00037 34.9 5.9 48 166-220 301-352 (384)
260 PF06014 DUF910: Bacterial pro 63.7 4.9 0.00011 28.3 1.7 25 201-229 7-31 (62)
261 TIGR01482 SPP-subfamily Sucros 63.1 16 0.00035 31.2 5.2 40 145-185 15-57 (225)
262 PLN03063 alpha,alpha-trehalose 62.4 5.8 0.00013 41.6 2.6 70 196-273 678-780 (797)
263 COG0561 Cof Predicted hydrolas 62.0 16 0.00035 32.3 5.2 46 145-191 20-68 (264)
264 TIGR01668 YqeG_hyp_ppase HAD s 61.9 4.7 0.0001 33.7 1.6 14 3-16 26-39 (170)
265 KOG0323 TFIIF-interacting CTD 61.5 13 0.00027 38.0 4.7 84 143-229 199-287 (635)
266 TIGR01485 SPP_plant-cyano sucr 60.7 16 0.00035 32.1 4.9 42 148-191 24-68 (249)
267 PRK03669 mannosyl-3-phosphogly 60.5 20 0.00044 32.0 5.5 38 145-183 24-64 (271)
268 PLN03064 alpha,alpha-trehalose 60.5 4.5 9.9E-05 43.1 1.5 74 156-230 713-811 (934)
269 PF08235 LNS2: LNS2 (Lipin/Ned 59.4 41 0.00088 28.2 6.7 86 146-238 28-141 (157)
270 PF09419 PGP_phosphatase: Mito 59.0 5.2 0.00011 33.9 1.3 12 3-14 42-53 (168)
271 PF06117 DUF957: Enterobacteri 58.6 15 0.00032 26.0 3.3 30 1-31 23-52 (65)
272 PRK10976 putative hydrolase; P 58.6 18 0.00039 32.0 4.8 40 145-185 19-61 (266)
273 TIGR01686 FkbH FkbH-like domai 57.8 5.9 0.00013 36.6 1.6 16 2-17 3-18 (320)
274 COG4502 5'(3')-deoxyribonucleo 55.4 5 0.00011 33.2 0.6 69 144-229 67-144 (180)
275 KOG2961 Predicted hydrolase (H 52.8 15 0.00033 30.9 3.0 47 197-247 123-171 (190)
276 COG5610 Predicted hydrolase (H 51.6 61 0.0013 32.0 7.3 98 140-242 92-201 (635)
277 PLN02205 alpha,alpha-trehalose 50.4 25 0.00054 37.3 5.0 17 1-17 595-611 (854)
278 KOG2882 p-Nitrophenyl phosphat 50.4 23 0.00049 32.8 4.1 38 140-178 34-74 (306)
279 KOG2134 Polynucleotide kinase 49.9 29 0.00062 33.4 4.8 91 144-239 103-229 (422)
280 KOG1605 TFIIF-interacting CTD 49.1 10 0.00022 34.4 1.7 92 144-240 130-225 (262)
281 PF08235 LNS2: LNS2 (Lipin/Ned 46.6 11 0.00023 31.7 1.2 54 163-221 94-151 (157)
282 TIGR00236 wecB UDP-N-acetylglu 46.2 1.1E+02 0.0023 28.2 8.1 85 161-247 32-121 (365)
283 KOG3107 Predicted haloacid deh 45.7 64 0.0014 31.0 6.4 79 157-242 369-450 (468)
284 PRK15424 propionate catabolism 45.7 1.1E+02 0.0023 30.8 8.4 81 150-243 96-180 (538)
285 COG0761 lytB 4-Hydroxy-3-methy 45.3 61 0.0013 29.9 6.0 80 161-253 195-274 (294)
286 TIGR02329 propionate_PrpR prop 44.6 96 0.0021 31.0 7.9 83 150-245 86-172 (526)
287 COG0241 HisB Histidinol phosph 44.6 12 0.00026 32.1 1.3 24 168-192 107-130 (181)
288 PF05690 ThiG: Thiazole biosyn 42.5 1.4E+02 0.0031 26.8 7.7 92 142-245 101-206 (247)
289 COG0731 Fe-S oxidoreductases [ 41.8 61 0.0013 30.0 5.5 42 142-190 89-134 (296)
290 PF05152 DUF705: Protein of un 40.2 19 0.0004 33.2 1.9 16 3-18 123-138 (297)
291 PHA02530 pseT polynucleotide k 40.2 18 0.00039 32.6 1.8 16 3-18 159-174 (300)
292 KOG3128 Uncharacterized conser 40.0 3E+02 0.0065 25.2 10.6 122 113-251 120-265 (298)
293 COG2179 Predicted hydrolase of 39.4 16 0.00036 31.0 1.3 12 3-14 29-40 (175)
294 PRK14502 bifunctional mannosyl 37.5 57 0.0012 33.8 5.0 40 145-185 433-475 (694)
295 TIGR01689 EcbF-BcbF capsule bi 37.4 94 0.002 24.9 5.4 28 144-171 23-53 (126)
296 PRK13762 tRNA-modifying enzyme 37.3 81 0.0018 29.3 5.8 27 143-169 140-169 (322)
297 KOG0203 Na+/K+ ATPase, alpha s 36.8 1.2E+02 0.0026 32.3 7.2 100 148-255 593-741 (1019)
298 PF04413 Glycos_transf_N: 3-De 36.0 65 0.0014 27.4 4.6 77 141-225 101-184 (186)
299 PF04007 DUF354: Protein of un 35.8 1.3E+02 0.0027 28.3 6.8 89 143-244 12-111 (335)
300 PF08620 RPAP1_C: RPAP1-like, 35.7 14 0.00029 27.0 0.2 10 5-14 3-12 (73)
301 COG5083 SMP2 Uncharacterized p 35.2 21 0.00045 34.9 1.5 14 3-16 376-389 (580)
302 PTZ00445 p36-lilke protein; Pr 34.9 16 0.00035 32.2 0.6 13 3-15 44-56 (219)
303 COG2121 Uncharacterized protei 34.5 2.5E+02 0.0054 24.7 7.8 78 160-247 70-157 (214)
304 KOG0204 Calcium transporting A 33.7 2.8E+02 0.006 29.8 9.2 95 145-250 647-769 (1034)
305 KOG4549 Magnesium-dependent ph 33.7 1.9E+02 0.0042 23.6 6.5 78 144-223 43-133 (144)
306 PRK00994 F420-dependent methyl 33.4 2.6E+02 0.0056 25.3 7.9 65 156-223 29-98 (277)
307 cd08199 EEVS 2-epi-5-epi-valio 33.3 2.7E+02 0.0058 26.2 8.7 97 146-244 10-122 (354)
308 PF03808 Glyco_tran_WecB: Glyc 33.1 85 0.0018 26.2 4.7 51 198-248 34-86 (172)
309 PF06189 5-nucleotidase: 5'-nu 33.1 3.6E+02 0.0079 24.5 8.9 91 138-243 8-109 (264)
310 PF09269 DUF1967: Domain of un 32.9 46 0.001 23.7 2.6 23 200-222 44-66 (69)
311 PF04230 PS_pyruv_trans: Polys 32.3 80 0.0017 26.8 4.6 40 196-245 246-285 (286)
312 PRK10017 colanic acid biosynth 32.2 4.6E+02 0.0099 25.4 10.2 91 156-261 271-370 (426)
313 TIGR01286 nifK nitrogenase mol 31.2 5.2E+02 0.011 25.8 10.6 39 196-243 424-462 (515)
314 TIGR03278 methan_mark_10 putat 30.6 2.6E+02 0.0055 27.1 8.1 90 117-208 55-163 (404)
315 COG4483 Uncharacterized protei 30.4 46 0.001 23.7 2.2 25 201-229 7-31 (68)
316 cd01615 CIDE_N CIDE_N domain, 30.3 29 0.00063 25.6 1.2 15 4-18 42-56 (78)
317 PF06901 FrpC: RTX iron-regula 29.5 27 0.00059 30.4 1.1 13 3-15 59-71 (271)
318 KOG3189 Phosphomannomutase [Li 29.4 37 0.00081 29.9 1.9 28 4-31 13-40 (252)
319 KOG2832 TFIIF-interacting CTD 29.2 1.1E+02 0.0024 29.2 5.2 70 148-219 217-290 (393)
320 COG1927 Mtd Coenzyme F420-depe 28.8 3.5E+02 0.0076 24.1 7.8 61 156-222 29-97 (277)
321 PF07085 DRTGG: DRTGG domain; 28.8 1.2E+02 0.0025 22.9 4.5 37 212-252 40-77 (105)
322 PLN02887 hydrolase family prot 28.7 1.3E+02 0.0028 30.5 6.0 38 145-183 325-365 (580)
323 COG0541 Ffh Signal recognition 28.6 3.2E+02 0.0068 26.9 8.2 88 139-228 131-229 (451)
324 smart00266 CAD Domains present 28.1 33 0.00072 25.0 1.2 15 4-18 40-54 (74)
325 PF02358 Trehalose_PPase: Treh 28.0 66 0.0014 28.0 3.4 49 170-222 168-219 (235)
326 TIGR03595 Obg_CgtA_exten Obg f 27.9 68 0.0015 22.8 2.8 24 200-223 44-67 (69)
327 cd00452 KDPG_aldolase KDPG and 27.6 3.6E+02 0.0077 22.6 7.8 18 221-242 106-123 (190)
328 PF02017 CIDE-N: CIDE-N domain 27.1 35 0.00075 25.2 1.2 15 4-18 42-56 (78)
329 PF00532 Peripla_BP_1: Peripla 27.1 2E+02 0.0042 25.7 6.4 60 146-207 19-78 (279)
330 cd06537 CIDE_N_B CIDE_N domain 27.0 36 0.00078 25.3 1.2 15 4-18 41-55 (81)
331 cd06536 CIDE_N_ICAD CIDE_N dom 26.9 36 0.00077 25.3 1.2 15 4-18 44-58 (80)
332 PRK01045 ispH 4-hydroxy-3-meth 26.8 2.7E+02 0.0059 25.8 7.2 80 160-252 192-271 (298)
333 cd08175 G1PDH Glycerol-1-phosp 26.6 3.6E+02 0.0079 24.9 8.3 89 152-244 16-112 (348)
334 COG2022 ThiG Uncharacterized e 26.3 4.9E+02 0.011 23.5 9.2 94 141-244 107-212 (262)
335 PF04028 DUF374: Domain of unk 26.2 2.6E+02 0.0055 20.2 6.4 54 163-222 16-69 (74)
336 cd06539 CIDE_N_A CIDE_N domain 25.8 39 0.00085 24.9 1.2 15 4-18 42-56 (78)
337 PF06506 PrpR_N: Propionate ca 25.7 83 0.0018 26.3 3.4 75 156-246 75-153 (176)
338 TIGR01357 aroB 3-dehydroquinat 25.4 3.1E+02 0.0067 25.4 7.6 85 158-244 20-115 (344)
339 TIGR00216 ispH_lytB (E)-4-hydr 25.4 2.4E+02 0.0052 25.8 6.6 81 160-253 190-270 (280)
340 PF02350 Epimerase_2: UDP-N-ac 25.0 1.5E+02 0.0032 27.7 5.3 84 161-247 12-102 (346)
341 TIGR02468 sucrsPsyn_pln sucros 24.7 2.1E+02 0.0046 31.2 6.9 82 156-245 905-1002(1050)
342 COG1058 CinA Predicted nucleot 23.5 1.3E+02 0.0029 27.2 4.4 52 196-248 21-72 (255)
343 smart00497 IENR1 Intron encode 23.3 58 0.0013 21.1 1.7 25 3-31 3-27 (53)
344 COG3882 FkbH Predicted enzyme 23.2 44 0.00095 33.2 1.4 13 2-14 222-234 (574)
345 TIGR02244 HAD-IG-Ncltidse HAD 23.1 41 0.0009 31.7 1.2 16 3-18 13-28 (343)
346 KOG0210 P-type ATPase [Inorgan 23.1 2.3E+02 0.005 29.8 6.4 39 196-239 768-806 (1051)
347 TIGR03679 arCOG00187 arCOG0018 22.9 4.8E+02 0.01 22.6 7.9 82 168-252 44-128 (218)
348 PLN02151 trehalose-phosphatase 22.7 1.4E+02 0.003 28.4 4.6 49 165-220 268-320 (354)
349 PRK12360 4-hydroxy-3-methylbut 22.7 3.2E+02 0.0069 25.1 6.8 81 160-253 191-271 (281)
350 cd08197 DOIS 2-deoxy-scyllo-in 22.5 4.7E+02 0.01 24.6 8.2 93 152-246 16-120 (355)
351 PF02593 dTMP_synthase: Thymid 22.0 97 0.0021 27.4 3.2 82 145-227 59-149 (217)
352 cd01994 Alpha_ANH_like_IV This 21.8 3.2E+02 0.007 23.3 6.4 79 169-250 47-128 (194)
353 cd06538 CIDE_N_FSP27 CIDE_N do 21.7 52 0.0011 24.4 1.2 15 4-18 41-55 (79)
354 cd06535 CIDE_N_CAD CIDE_N doma 21.6 54 0.0012 24.1 1.3 18 4-23 42-59 (77)
355 COG4825 Uncharacterized membra 21.3 4.9E+02 0.011 24.4 7.6 84 148-245 169-254 (395)
356 PF07453 NUMOD1: NUMOD1 domain 20.7 63 0.0014 19.6 1.3 22 3-24 2-23 (37)
357 PF09949 DUF2183: Uncharacteri 20.6 3.2E+02 0.007 20.9 5.5 30 196-227 50-80 (100)
358 PRK10076 pyruvate formate lyas 20.5 2.8E+02 0.0062 24.1 5.9 61 117-177 20-88 (213)
359 KOG0780 Signal recognition par 20.0 7.2E+02 0.016 24.4 8.7 81 145-227 139-229 (483)
No 1
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=292.15 Aligned_cols=207 Identities=27% Similarity=0.362 Sum_probs=172.1
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.++|+|||||||+||.+.+..++|++++++ |+++. .... ++.+||.|.+..+. +.+...
T Consensus 4 ~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~------~~~~~-------~~~~------~~~~ig~~~~~~~~-~~~~~~- 62 (220)
T COG0546 4 IKAILFDLDGTLVDSAEDILRAFNAALAEL------GLPPL-------DEEE------IRQLIGLGLDELIE-RLLGEA- 62 (220)
T ss_pred CCEEEEeCCCccccChHHHHHHHHHHHHHc------CCCCC-------CHHH------HHHHhcCCHHHHHH-HHhccc-
Confidence 489999999999999999999999999999 44432 1245 88899999988662 443210
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
..+...+.++.++++|.+.|.+.. .+++||||.++|+ ++|
T Consensus 63 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g 105 (220)
T COG0546 63 -----------------------------------DEEAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAG 105 (220)
T ss_pred -----------------------------------cchhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCC
Confidence 001111445667777777776655 5799999999999 899
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+|||++..++.+|++ +|+..||+.++|++ .||+|+++..++++++++|++++|||||.+||++|++
T Consensus 106 ~~l~i~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~---- 180 (220)
T COG0546 106 YKLGIVTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKA---- 180 (220)
T ss_pred CeEEEEeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHH----
Confidence 99999999999999999996 99999999999954 3699999999999999998899999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|+|||++.+.+..++ |++++.++.+|...|
T Consensus 181 Ag~~~v~v~~g~~~~~~l~~~~--~d~vi~~~~el~~~l 217 (220)
T COG0546 181 AGVPAVGVTWGYNSREELAQAG--ADVVIDSLAELLALL 217 (220)
T ss_pred cCCCEEEEECCCCCCcchhhcC--CCEEECCHHHHHHHH
Confidence 9999999999998667777665 559999999997655
No 2
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=5.7e-36 Score=264.23 Aligned_cols=206 Identities=18% Similarity=0.173 Sum_probs=162.8
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.++|+|||||||+||.+.+..+++.+++++ |++.. ..+. ++.++|.|.+.++. ..+..
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~-------~~~~------~~~~~g~~~~~~~~-~~~~~- 69 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAAR------GRAPI-------TLAQ------LRPVVSKGARAMLA-VAFPE- 69 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHC------CCCCC-------CHHH------HHHHhhhHHHHHHH-HHhcc-
Confidence 6799999999999999999999999999999 44432 1234 66678888766441 21100
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
.+.+..++....+++.|.+.+ ....++|||+.++|+ ++
T Consensus 70 -----------------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~L~~L~~~ 110 (229)
T PRK13226 70 -----------------------------------LDAAARDALIPEFLQRYEALI----GTQSQLFDGVEGMLQRLECA 110 (229)
T ss_pred -----------------------------------CChHHHHHHHHHHHHHHHHhh----hhcCeeCCCHHHHHHHHHHC
Confidence 011222233444455554432 234689999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||++...+..++++ +|+..+|+.+++++ .||+|+++.++++++|++|++|+||||+.+|+++|++
T Consensus 111 g~~l~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~--- 186 (229)
T PRK13226 111 GCVWGIVTNKPEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARA--- 186 (229)
T ss_pred CCeEEEECCCCHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHH---
Confidence 999999999999999999996 99999999999865 3699999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCCh-HHHHhcCCCCCceeechhHHHhhc
Q 024003 234 LDGWNLYLVDWGYNTP-KERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~-~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|+|||+.. +.+... .|++++.++++|.++|
T Consensus 187 -aG~~~i~v~~g~~~~~~~~~~~--~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 187 -AGMPSVAALWGYRLHDDDPLAW--QADVLVEQPQLLWNPA 224 (229)
T ss_pred -CCCcEEEEeecCCCCCcChhhc--CCCeeeCCHHHHHHHh
Confidence 999999999999743 334443 4779999999999887
No 3
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=100.00 E-value=3.7e-34 Score=249.28 Aligned_cols=201 Identities=15% Similarity=0.136 Sum_probs=155.8
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
.++|+|||||||+||.+.+..+.+.+++++. .+..+ .+. ++.++|......+ +.+
T Consensus 3 ~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~------~~~~~-------~~~------~~~~~G~~~~~~~--~~~---- 57 (214)
T PRK13288 3 INTVLFDLDGTLINTNELIISSFLHTLKTYY------PNQYK-------RED------VLPFIGPSLHDTF--SKI---- 57 (214)
T ss_pred ccEEEEeCCCcCccCHHHHHHHHHHHHHHhC------CCCCC-------HHH------HHHHhCcCHHHHH--Hhc----
Confidence 4899999999999999999999999999983 22111 123 4445565443322 111
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
.++..++....++..+.+ ......++|||+.++|+ ++|
T Consensus 58 -----------------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~L~~~g 98 (214)
T PRK13288 58 -----------------------------------DESKVEEMITTYREFNHE----HHDELVTEYETVYETLKTLKKQG 98 (214)
T ss_pred -----------------------------------CHHHHHHHHHHHHHHHHH----hhhhhcccCcCHHHHHHHHHHCC
Confidence 111112222333333322 22345689999999999 689
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||+++..+..+|+. +|+..||+.++|.+ .||+|+++.+++++++++|++++|||||.+|+++|++
T Consensus 99 ~~~~i~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~---- 173 (214)
T PRK13288 99 YKLGIVTTKMRDTVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKN---- 173 (214)
T ss_pred CeEEEEeCCCHHHHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH----
Confidence 99999999999999999996 99999999999975 3599999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||+++++++.+.+ |++++.++.+|...+
T Consensus 174 aG~~~i~v~~g~~~~~~l~~~~--~~~~i~~~~~l~~~i 210 (214)
T PRK13288 174 AGTKTAGVAWTIKGREYLEQYK--PDFMLDKMSDLLAIV 210 (214)
T ss_pred CCCeEEEEcCCCCCHHHHhhcC--cCEEECCHHHHHHHH
Confidence 9999999999998887776654 669999999987643
No 4
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=100.00 E-value=5e-34 Score=247.15 Aligned_cols=206 Identities=19% Similarity=0.248 Sum_probs=157.9
Q ss_pred EEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccccc
Q 024003 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRLPS 84 (274)
Q Consensus 5 ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~~~ 84 (274)
|+|||||||+||.+.+..+++.+++++ |+++.+ ... ++.++|.+....+ .+.+...
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~------~~~~~~-------~~~------~~~~~g~~~~~~~-~~~~~~~---- 56 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAAL------GLPPAT-------LAR------VIGFIGNGVPVLM-ERVLAWA---- 56 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHH------HHHHhcccHHHHH-HHHhhcc----
Confidence 699999999999999999999999988 343221 223 4456777765443 1222110
Q ss_pred ccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCcE
Q 024003 85 LRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 161 (274)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~l 161 (274)
+.. .+.+..++....+.+.|. +......++|||+.++|+ ++|+++
T Consensus 57 --------~~~--------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~L~~l~~~g~~~ 104 (213)
T TIGR01449 57 --------GQE--------------------PDAQRVAELRKLFDRHYE----EVAGELTSVFPGVEATLGALRAKGLRL 104 (213)
T ss_pred --------ccc--------------------cChHHHHHHHHHHHHHHH----HhccccCccCCCHHHHHHHHHHCCCeE
Confidence 000 111222223333344433 333445789999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCC
Q 024003 162 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 237 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv 237 (274)
+|+||++...++.++++ +|+..+|+.++|++ .||+|+++.+++++++++|++|+|||||.+|+++|++ ||+
T Consensus 105 ~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~----aG~ 179 (213)
T TIGR01449 105 GLVTNKPTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARA----AGC 179 (213)
T ss_pred EEEeCCCHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHH----CCC
Confidence 99999999999999996 99999999999875 3699999999999999999999999999999999998 999
Q ss_pred cEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 238 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 238 ~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++|+|.||+++.+++...+ |++++.++.+|.+.|
T Consensus 180 ~~i~v~~g~~~~~~l~~~~--a~~~i~~~~~l~~~~ 213 (213)
T TIGR01449 180 PSVLLTYGYRYGEAIDLLP--PDVLYDSLNELPPLL 213 (213)
T ss_pred eEEEEccCCCCCcchhhcC--CCeEeCCHHHHHhhC
Confidence 9999999998877776654 569999999987643
No 5
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=100.00 E-value=1.3e-33 Score=252.16 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=157.8
Q ss_pred ceEEEecCcccccCHH-HHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~-di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|+|||||||+||.. .+..+++.+++++ |++.. .++ ++..+|.+....+. ..+.
T Consensus 3 k~viFD~DGTLiDs~~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~G~~~~~~~~-~~~~--- 58 (253)
T TIGR01422 3 EAVIFDWAGTTVDFGSFAPTQAFVEAFAEF------GVQIT--------LEE------ARGPMGLGKWDHIR-ALLK--- 58 (253)
T ss_pred eEEEEeCCCCeecCCCccHHHHHHHHHHHc------CCCcc--------HHH------HHHhcCccHHHHHH-HHhc---
Confidence 7899999999999964 3578899999888 44321 133 45567777654431 1110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhc--cCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---h
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---L 156 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~ 156 (274)
..... +.+.+.+| .+.++..+....|++.|.+. .....++|||+.++|+ +
T Consensus 59 --------------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~e~L~~L~~ 113 (253)
T TIGR01422 59 --------------MPAVA-------ERWRAKFGRLPTEADIEAIYEAFEPLQLAK----LAEYSSPIPGVIEVIAYLRA 113 (253)
T ss_pred --------------CHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HHhcCccCCCHHHHHHHHHH
Confidence 00010 11112222 13334444444555544333 2345789999999999 7
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCC-ceEecCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhHHHHhhc
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f-~~v~g~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~ 230 (274)
+|++++|+||+++..++.+|++ +|+..+| +.|+|++ .||+|+++..+++++|+. |++|+|||||.+|+++|++
T Consensus 114 ~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~ 192 (253)
T TIGR01422 114 RGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRN 192 (253)
T ss_pred CCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHH
Confidence 8999999999999999999996 9999885 8999875 369999999999999995 9999999999999999998
Q ss_pred cCccCCCcEEEEeCCCCC-----------------------hHHHHhcCCCCCceeechhHHHhhc
Q 024003 231 EPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 231 ~~~~Agv~~i~v~wGy~~-----------------------~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|||++|+|.||+++ .++|..++ |++++.++.+|...|
T Consensus 193 ----aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 193 ----AGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAG--AHYVIDTLAELPAVI 252 (253)
T ss_pred ----CCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcC--CCEehhcHHHHHHhh
Confidence 99999999999973 35676654 569999999987654
No 6
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=100.00 E-value=3.1e-33 Score=249.82 Aligned_cols=202 Identities=12% Similarity=0.075 Sum_probs=152.1
Q ss_pred CceEEEecCcccccCHHHHHHHHHHHHHHhC-CCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 2 EDLYALDFDGVICDSCEETALSAVKAARVRW-PSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~-~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
.++|+|||||||+||.+.+..+++.++++++ +. |.+.. .... .+.++|.+.+..+ .+.+..
T Consensus 22 ~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~---g~~~~-------~~~~------~~~~~G~~~~~~~-~~~~~~- 83 (248)
T PLN02770 22 LEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNG---GVPIT-------EEFF------VENIAGKHNEDIA-LGLFPD- 83 (248)
T ss_pred cCEEEEcCCCccCcCHHHHHHHHHHHHHHhcccc---CCCCC-------HHHH------HHHcCCCCHHHHH-HHHcCc-
Confidence 3799999999999999999999999999992 11 12211 1112 3456777665543 122100
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
. . +...+....+++.|.+.+ .....+||||.++|+ ++
T Consensus 84 ------------~--~----------------------~~~~~~~~~~~~~y~~~~----~~~~~l~pgv~e~L~~L~~~ 123 (248)
T PLN02770 84 ------------D--L----------------------ERGLKFTDDKEALFRKLA----SEQLKPLNGLYKLKKWIEDR 123 (248)
T ss_pred ------------c--h----------------------hhHHHHHHHHHHHHHHHH----HhcCCcCccHHHHHHHHHHc
Confidence 0 0 000111122333333322 234689999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||++...++..|++ +|+..||+.|++++ .||+|+++++++++++++|++|+||||+..|+++|++
T Consensus 124 g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~--- 199 (248)
T PLN02770 124 GLKRAAVTNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVA--- 199 (248)
T ss_pred CCeEEEEeCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHH---
Confidence 999999999999999999996 99999999999876 3699999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||+++|+|.||+ ..+++... .|++++.++.++
T Consensus 200 -aGi~~i~v~~g~-~~~~l~~~--~a~~vi~~~~e~ 231 (248)
T PLN02770 200 -AGMPVVGLTTRN-PESLLMEA--KPTFLIKDYEDP 231 (248)
T ss_pred -CCCEEEEEeCCC-CHHHHhhc--CCCEEeccchhh
Confidence 999999999997 55556544 566999999984
No 7
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=100.00 E-value=1.4e-32 Score=239.96 Aligned_cols=206 Identities=16% Similarity=0.115 Sum_probs=160.1
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhccccc-ccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQL-RPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~v-r~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|+|||||||+||.+.+..+.+.+++++ |++... .+ + +.++|.+...++ .+.+ .
T Consensus 2 k~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~~~--------~~------~~~~~~g~~~~~~~-~~~~-~-- 57 (220)
T TIGR03351 2 SLVVLDMAGTTVDEDGLVYRALRQAVTAA------GLSPTP--------EE------VQSAWMGQSKIEAI-RALL-A-- 57 (220)
T ss_pred cEEEEecCCCeeccCchHHHHHHHHHHHc------CCCCCH--------HH------HHHhhcCCCHHHHH-HHHH-h--
Confidence 78999999999999999999999999988 443211 22 2 226676655433 1222 1
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
.++.+.+..++....+++.|.+.|.. ...++|||+.++|+ ++|
T Consensus 58 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~G~~~~L~~L~~~g 103 (220)
T TIGR03351 58 -------------------------------LDGADEAEAQAAFADFEERLAEAYDD---GPPVALPGAEEAFRSLRSSG 103 (220)
T ss_pred -------------------------------ccCCCHHHHHHHHHHHHHHHHHHhcc---cCCccCCCHHHHHHHHHHCC
Confidence 11122223333344455555443322 24689999999999 689
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCC--CCCceEecCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhHHHHhhcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVT--ITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~--~~f~~v~g~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~~ 231 (274)
++++|+||++...++.+|++ +|+. .+|+.+++.+ .||+|+++..+++++++. |++|+||||+..|+++|++
T Consensus 104 ~~~~ivT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~- 181 (220)
T TIGR03351 104 IKVALTTGFDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGIN- 181 (220)
T ss_pred CEEEEEeCCchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHH-
Confidence 99999999999999999996 9998 9999999875 259999999999999997 7999999999999999998
Q ss_pred CccCCCcE-EEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 232 PELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 232 ~~~Agv~~-i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+||++ |+|.||+.+.+++...+ |++++.++.+|...+
T Consensus 182 ---aG~~~~i~~~~g~~~~~~~~~~~--~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 182 ---AGAGAVVGVLTGAHDAEELSRHP--HTHVLDSVADLPALL 219 (220)
T ss_pred ---CCCCeEEEEecCCCcHHHHhhcC--CceeecCHHHHHHhh
Confidence 99999 99999999888887654 669999999987654
No 8
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=100.00 E-value=8.3e-33 Score=239.24 Aligned_cols=196 Identities=20% Similarity=0.231 Sum_probs=152.7
Q ss_pred EEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccccc
Q 024003 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRLPS 84 (274)
Q Consensus 5 ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~~~ 84 (274)
|+|||||||+||.+.+..++|.+++++. |.+.. ..+. ++.++|..++.++ +.+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~-------~~~~------~~~~~g~~~~~~~--~~~------- 53 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVV-----GDGPA-------PFEE------YRRHLGRYFPDIM--RIM------- 53 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhc-----CCCCC-------CHHH------HHHHhCccHHHHH--HHc-------
Confidence 6999999999999999999999999862 22211 1234 5667777765443 111
Q ss_pred ccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCcE
Q 024003 85 LRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 161 (274)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~l 161 (274)
+. +... . ..+...+ |. .....++|||+.++|+ ++|+++
T Consensus 54 --------~~----------------------~~~~-~---~~~~~~~---~~--~~~~~~~~~g~~~~L~~L~~~g~~~ 94 (205)
T TIGR01454 54 --------GL----------------------PLEM-E---EPFVRES---YR--LAGEVEVFPGVPELLAELRADGVGT 94 (205)
T ss_pred --------CC----------------------CHHH-H---HHHHHHH---HH--hhcccccCCCHHHHHHHHHHCCCeE
Confidence 11 0000 0 0011111 11 1235789999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCC
Q 024003 162 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 237 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv 237 (274)
+|+||++...++..+++ +|+..+|+.++|.+ .||+|+++.+++++++++|++++||||+.+|+++|++ +||
T Consensus 95 ~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~----~Gi 169 (205)
T TIGR01454 95 AIATGKSGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARA----AGT 169 (205)
T ss_pred EEEeCCchHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHH----cCC
Confidence 99999999999999996 99999999999865 3699999999999999999999999999999999998 999
Q ss_pred cEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 238 NLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 238 ~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++|+|.||+++.+++...+ |++++.++.++...+
T Consensus 170 ~~i~~~~g~~~~~~l~~~~--~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 170 ATVAALWGEGDAGELLAAR--PDFLLRKPQSLLALC 203 (205)
T ss_pred eEEEEEecCCChhhhhhcC--CCeeeCCHHHHHHHh
Confidence 9999999999988887654 669999999987654
No 9
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=100.00 E-value=1.1e-32 Score=248.46 Aligned_cols=215 Identities=13% Similarity=0.067 Sum_probs=155.2
Q ss_pred ceEEEecCcccccCHHH-HHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEE-TALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~d-i~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
|+|+|||||||+||... ...+++.+++++ |++.. .++ ++..+|.+....+ +.+..
T Consensus 5 k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~G~~~~~~~--~~~~~-- 60 (267)
T PRK13478 5 QAVIFDWAGTTVDFGSFAPTQAFVEAFAQF------GVEIT--------LEE------ARGPMGLGKWDHI--RALLK-- 60 (267)
T ss_pred EEEEEcCCCCeecCCCccHHHHHHHHHHHc------CCCCC--------HHH------HHHhcCCCHHHHH--HHHHh--
Confidence 89999999999999643 367899999888 44321 123 4456676654433 11110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhcc--CHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---h
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---L 156 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~ 156 (274)
..... ..+...+|. +.++..+....+++.|.+. ......+|||+.++|+ +
T Consensus 61 --------------~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~pg~~elL~~L~~ 115 (267)
T PRK13478 61 --------------MPRVA-------ARWQAVFGRLPTEADVDALYAAFEPLQIAK----LADYATPIPGVLEVIAALRA 115 (267)
T ss_pred --------------cHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH----HhhcCCCCCCHHHHHHHHHH
Confidence 00000 011111221 2333344444445444433 2345789999999999 7
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCC-ceEecCC----CCCcHHHHHHHHhhCCCC-CCcEEEEcCChhHHHHhhc
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f-~~v~g~~----~~pkp~~l~~~l~~l~~~-~~~~l~VGDs~~Di~aA~~ 230 (274)
+|++++|+||++...++.+|+. +++..+| +.|+|++ .||+|+++.++++++|+. |++|+|||||.+|+++|++
T Consensus 116 ~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~ 194 (267)
T PRK13478 116 RGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLN 194 (267)
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHH
Confidence 8999999999999999999996 8988774 8898875 369999999999999996 6999999999999999998
Q ss_pred cCccCCCcEEEEeCCCCC-----------------------hHHHHhcCCCCCceeechhHHHhhc
Q 024003 231 EPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 231 ~~~~Agv~~i~v~wGy~~-----------------------~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.|||+. .+++..++ |++++.++.++.+.|
T Consensus 195 ----aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--a~~vi~~~~~l~~~l 254 (267)
T PRK13478 195 ----AGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAG--AHYVIDTIADLPAVI 254 (267)
T ss_pred ----CCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcC--CCeehhhHHHHHHHH
Confidence 99999999999973 35676665 459999999987654
No 10
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=3.1e-32 Score=247.05 Aligned_cols=200 Identities=23% Similarity=0.243 Sum_probs=156.2
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+.+.+++++ |++..+ .+. ++.++|...+.++ +.+
T Consensus 63 k~vIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~~~~-------~~~------~~~~~g~~~~~i~--~~~----- 116 (273)
T PRK13225 63 QAIIFDFDGTLVDSLPTVVAIANAHAPDF------GYDPID-------ERD------YAQLRQWSSRTIV--RRA----- 116 (273)
T ss_pred CEEEECCcCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHH------HHHHhCccHHHHH--HHc-----
Confidence 78999999999999999999999999998 443221 122 3345554443322 111
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+.+.++.++....+++.|.+ +....++||||.++|+ ++|+
T Consensus 117 --------------------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~pg~~e~L~~L~~~gi 159 (273)
T PRK13225 117 --------------------------------GLSPWQQARLLQRVQRQLGD-----CLPALQLFPGVADLLAQLRSRSL 159 (273)
T ss_pred --------------------------------CCCHHHHHHHHHHHHHHHHh-----hcccCCcCCCHHHHHHHHHHCCC
Confidence 11222222333444444322 2345789999999999 7899
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCc
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 238 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~ 238 (274)
+++|+||+++..++.+|++ +|+..+|+.|++++. .+||+++..++++++++|++|+||||+.+|+++|++ ||+.
T Consensus 160 ~laIvSn~~~~~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~----AG~~ 234 (273)
T PRK13225 160 CLGILSSNSRQNIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQ----VGLI 234 (273)
T ss_pred eEEEEeCCCHHHHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHH----CCCe
Confidence 9999999999999999996 999999999988664 488999999999999999999999999999999998 9999
Q ss_pred EEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 239 LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 239 ~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
+|+|.||+++.+++...+ |++++.++.+|...
T Consensus 235 ~I~v~~g~~~~~~l~~~~--ad~~i~~~~eL~~~ 266 (273)
T PRK13225 235 AVAVTWGFNDRQSLVAAC--PDWLLETPSDLLQA 266 (273)
T ss_pred EEEEecCCCCHHHHHHCC--CCEEECCHHHHHHH
Confidence 999999999988887654 66999999998654
No 11
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=3.6e-32 Score=246.34 Aligned_cols=209 Identities=22% Similarity=0.275 Sum_probs=162.3
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.++|+|||||||+||.+.+..+++.+++++ |++.. ..+. ++.++|.|...++ ...+...
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~-------~~~~------~~~~~g~~~~~~~-~~~l~~~ 71 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLEL------GRPPA-------GLEA------VRHWVGNGAPVLV-RRALAGS 71 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHc------CCCCC-------CHHH------HHHHhChhHHHHH-HHHhccc
Confidence 5689999999999999999999999999999 44321 1234 5668888876543 2222100
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
...++.+++..++....+++.|... .....+|||+.++|+ ++
T Consensus 72 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~e~L~~Lk~~ 116 (272)
T PRK13223 72 ------------------------------IDHDGVDDELAEQALALFMEAYADS-----HELTVVYPGVRDTLKWLKKQ 116 (272)
T ss_pred ------------------------------ccccCCCHHHHHHHHHHHHHHHHhc-----CcCCccCCCHHHHHHHHHHC
Confidence 0011122223333334444444321 224689999999999 68
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||++...++.++++ +|+..+|+.+++++ .||+|++++.+++++|++|++|+||||+.+|+++|++
T Consensus 117 g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~--- 192 (272)
T PRK13223 117 GVEMALITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKA--- 192 (272)
T ss_pred CCeEEEEECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHH---
Confidence 999999999999999999996 99999999999876 3599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
+|+++++|.|||+...++... .|+.++.++.+|..
T Consensus 193 -aGi~~i~v~~G~~~~~~l~~~--~~~~vi~~l~el~~ 227 (272)
T PRK13223 193 -AGVQCVALSYGYNHGRPIAEE--SPALVIDDLRALLP 227 (272)
T ss_pred -CCCeEEEEecCCCCchhhhhc--CCCEEECCHHHHHH
Confidence 999999999999888777664 46799999999864
No 12
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=100.00 E-value=5.6e-32 Score=243.73 Aligned_cols=200 Identities=14% Similarity=0.118 Sum_probs=151.2
Q ss_pred ceEEEecCcccccCHHHHH-HHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEETA-LSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~-~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|||||||||+||.+.++ .+.+.+++++ |++... .+. ++.++|......+ ...+..
T Consensus 25 k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~------G~~~~~-------~e~------~~~~~G~~~~~~~-~~l~~~-- 82 (260)
T PLN03243 25 LGVVLEWEGVIVEDDSELERKAWRALAEEE------GKRPPP-------AFL------LKRAEGMKNEQAI-SEVLCW-- 82 (260)
T ss_pred eEEEEeCCCceeCCchHHHHHHHHHHHHHc------CCCCCH-------HHH------HHHhcCCCHHHHH-HHHhcc--
Confidence 7899999999999987776 5888999998 444221 123 5668888776544 122210
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
. .+.+...+....++..|... . ....++|||+.++|+ ++|
T Consensus 83 -----------~----------------------~~~~~~~~l~~~~~~~~~~~-~---~~~~~l~pg~~e~L~~L~~~g 125 (260)
T PLN03243 83 -----------S----------------------RDFLQMKRLAIRKEDLYEYM-Q---GGLYRLRPGSREFVQALKKHE 125 (260)
T ss_pred -----------C----------------------CCHHHHHHHHHHHHHHHHHH-H---ccCcccCCCHHHHHHHHHHCC
Confidence 0 01111122222233333211 1 124689999999999 789
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||++...++.+|++ +|+..||+.|++++ .||+|+++..+++++|+.|++|+|||||.+|+++|++
T Consensus 126 ~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~---- 200 (260)
T PLN03243 126 IPIAVASTRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHD---- 200 (260)
T ss_pred CEEEEEeCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHH----
Confidence 99999999999999999995 99999999999875 3699999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
|||++|+|. |+.+..++. .|++++.++.+|..
T Consensus 201 aG~~~i~v~-g~~~~~~l~----~ad~vi~~~~el~~ 232 (260)
T PLN03243 201 GCMKCVAVA-GKHPVYELS----AGDLVVRRLDDLSV 232 (260)
T ss_pred cCCEEEEEe-cCCchhhhc----cCCEEeCCHHHHHH
Confidence 999999995 887766553 36799999999854
No 13
>PRK11587 putative phosphatase; Provisional
Probab=99.97 E-value=6.2e-31 Score=230.09 Aligned_cols=194 Identities=18% Similarity=0.152 Sum_probs=143.4
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+++.+++++ |++.. .. .+.+.|.+....+ +.+..
T Consensus 4 k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~---------~~------~~~~~g~~~~~~~--~~~~~--- 57 (218)
T PRK11587 4 KGFLFDLDGTLVDSLPAVERAWSNWADRH------GIAPD---------EV------LNFIHGKQAITSL--RHFMA--- 57 (218)
T ss_pred CEEEEcCCCCcCcCHHHHHHHHHHHHHHc------CCCHH---------HH------HHHHcCCCHHHHH--HHHhc---
Confidence 89999999999999999999999999999 55421 11 2224566655433 22211
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+. +.+++.+.+..+ ..|. .......++|||+.++|+ ++|+
T Consensus 58 ----------~~----------------------~~~~~~~~~~~~-~~~~----~~~~~~~~~~pg~~e~L~~L~~~g~ 100 (218)
T PRK11587 58 ----------GA----------------------SEAEIQAEFTRL-EQIE----ATDTEGITALPGAIALLNHLNKLGI 100 (218)
T ss_pred ----------cC----------------------CcHHHHHHHHHH-HHHH----HhhhcCceeCcCHHHHHHHHHHcCC
Confidence 00 111111111111 1111 112345789999999998 7999
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||++...+...++. +|+. +|+.+++.+ .||+|+++..+++++|+.|++|+|||||..|+++|++ |
T Consensus 101 ~~~ivTn~~~~~~~~~l~~-~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~----a 174 (218)
T PRK11587 101 PWAIVTSGSVPVASARHKA-AGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLA----A 174 (218)
T ss_pred cEEEEcCCCchHHHHHHHh-cCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHH----C
Confidence 9999999999999999995 8884 577788754 3699999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
|+++|+|+||+... +. ..|++++.++.+|.
T Consensus 175 G~~~i~v~~~~~~~-~~----~~~~~~~~~~~el~ 204 (218)
T PRK11587 175 GCHVIAVNAPADTP-RL----DEVDLVLHSLEQLT 204 (218)
T ss_pred CCEEEEECCCCchh-hh----ccCCEEecchhhee
Confidence 99999999997432 22 24779999999874
No 14
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.97 E-value=8.5e-31 Score=246.11 Aligned_cols=199 Identities=12% Similarity=0.087 Sum_probs=150.3
Q ss_pred ceEEEecCcccccCHHHHHH-HHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEETAL-SAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~-a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|||||||||+||.+.+.. +.+.+++++ |++... ... ++.++|.+.+..+ .+.+..
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~------G~~~~~-------~e~------~~~~~G~~~~~~l-~~ll~~-- 189 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEE------GKSPPP-------AFI------LRRVEGMKNEQAI-SEVLCW-- 189 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHHHHHc------CCCCCH-------HHH------HHHhcCCCHHHHH-HHHhhc--
Confidence 78999999999999998876 555566677 444321 123 4668888776544 122210
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LAS 158 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g 158 (274)
. .++.+.++....+++.|.+. ......+|||+.|+|+ ++|
T Consensus 190 -----------~----------------------~~~~~~e~l~~~~~~~y~~~----~~~~~~l~pGa~ElL~~Lk~~G 232 (381)
T PLN02575 190 -----------S----------------------RDPAELRRMATRKEEIYQAL----QGGIYRLRTGSQEFVNVLMNYK 232 (381)
T ss_pred -----------c----------------------CCHHHHHHHHHHHHHHHHHH----hccCCCcCcCHHHHHHHHHHCC
Confidence 0 01122223333344444332 2344689999999999 799
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC----CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
++++|+||++...++.+|++ +||..||+.|+|++. ||+|++++++++++|+.|++|+|||||..|+++|++
T Consensus 233 iklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~---- 307 (381)
T PLN02575 233 IPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHD---- 307 (381)
T ss_pred CeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----
Confidence 99999999999999999996 999999999999763 699999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
|||++|+|.||+ ...++. .+++++.++.+|.
T Consensus 308 AGm~~IgV~~~~-~~~~l~----~Ad~iI~s~~EL~ 338 (381)
T PLN02575 308 ARMKCVAVASKH-PIYELG----AADLVVRRLDELS 338 (381)
T ss_pred cCCEEEEECCCC-ChhHhc----CCCEEECCHHHHH
Confidence 999999999986 333332 3568999999983
No 15
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.97 E-value=3.3e-30 Score=224.93 Aligned_cols=208 Identities=25% Similarity=0.317 Sum_probs=160.8
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+....+.+.+++++ |.+.. .... ++.++|.+...++ .+.+...
T Consensus 7 ~~iiFD~DGTL~d~~~~~~~~~~~~~~~~------~~~~~-------~~~~------~~~~~g~~~~~~~-~~~~~~~-- 64 (226)
T PRK13222 7 RAVAFDLDGTLVDSAPDLAAAVNAALAAL------GLPPA-------GEER------VRTWVGNGADVLV-ERALTWA-- 64 (226)
T ss_pred cEEEEcCCcccccCHHHHHHHHHHHHHHC------CCCCC-------CHHH------HHHHhCccHHHHH-HHHHhhc--
Confidence 89999999999999999999999999888 33322 1234 5567888876654 2333110
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+. ..+.++.++....+.+.|.+ ......+++||+.++|+ ++|+
T Consensus 65 ----------~~--------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~l~~~g~ 110 (226)
T PRK13222 65 ----------GR--------------------EPDEELLEKLRELFDRHYAE----NVAGGSRLYPGVKETLAALKAAGY 110 (226)
T ss_pred ----------cC--------------------CccHHHHHHHHHHHHHHHHH----hccccCccCCCHHHHHHHHHHCCC
Confidence 00 01223333333444444433 23335789999999999 6899
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||++....+.++++ +|+..+|+.+++.+ .||+|+++..++++++++|++++||||+.+|+++|++ +
T Consensus 111 ~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~----~ 185 (226)
T PRK13222 111 PLAVVTNKPTPFVAPLLEA-LGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARA----A 185 (226)
T ss_pred eEEEEeCCCHHHHHHHHHH-cCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHH----C
Confidence 9999999999999999996 99999999999865 3599999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|+++|+|.||+.+.+++... .|++++.++.+|.+-|
T Consensus 186 g~~~i~v~~g~~~~~~~~~~--~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 186 GCPSVGVTYGYNYGEPIALS--EPDVVIDHFAELLPLL 221 (226)
T ss_pred CCcEEEECcCCCCccchhhc--CCCEEECCHHHHHHHH
Confidence 99999999999876666543 5779999999987654
No 16
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.97 E-value=4.7e-30 Score=234.13 Aligned_cols=217 Identities=17% Similarity=0.190 Sum_probs=147.0
Q ss_pred ceEEEecCcccccCH-HHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSC-EETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~-~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
++|||||||||+||. +.+..+++.+++++ |+++.. ...+.+.. ++. +|.|...+. +.+...
T Consensus 41 k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~------G~~~~~--~~~~~~~~------~~~-~g~~~~~~~--~~~~~~- 102 (286)
T PLN02779 41 EALLFDCDGVLVETERDGHRVAFNDAFKEF------GLRPVE--WDVELYDE------LLN-IGGGKERMT--WYFNEN- 102 (286)
T ss_pred cEEEEeCceeEEccccHHHHHHHHHHHHHc------CCCCCC--CCHHHHHH------HHc-cCCChHHHH--HHHHHc-
Confidence 789999999999999 88889999999998 442110 00112223 334 777765432 222110
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCC-CCCCccHHHHHH---hC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGA-NRLYPGVSDALK---LA 157 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~-~~lypGv~e~L~---~~ 157 (274)
+...... .....+++..++....+.+.+.+.|.+.+... .++|||+.++|+ ++
T Consensus 103 -----------~~~~~~~------------~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~ 159 (286)
T PLN02779 103 -----------GWPTSTI------------EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAA 159 (286)
T ss_pred -----------CCCcccc------------ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHC
Confidence 0000000 00000111112222223333333333332222 489999999998 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCC---CCCceEecCC---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVT---ITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~---~~f~~v~g~~---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
|++++|+||++...+..+++. ++.. .+|+.+.+.+ .||+|+++.++++++|++|++|+||||+.+|+++|++
T Consensus 160 g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~- 237 (286)
T PLN02779 160 GIKVAVCSTSNEKAVSKIVNT-LLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKA- 237 (286)
T ss_pred CCeEEEEeCCCHHHHHHHHHH-hccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHH-
Confidence 999999999999999999995 6433 3345553333 3699999999999999999999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
|||++|+|.||+++.+++ ..|+.++.++.++
T Consensus 238 ---aG~~~i~v~~g~~~~~~l----~~ad~vi~~~~~l 268 (286)
T PLN02779 238 ---AGMRCIVTKSSYTADEDF----SGADAVFDCLGDV 268 (286)
T ss_pred ---cCCEEEEEccCCcccccc----CCCcEEECChhhc
Confidence 999999999999887665 2567999999887
No 17
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.97 E-value=2.4e-29 Score=220.28 Aligned_cols=205 Identities=17% Similarity=0.138 Sum_probs=151.1
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.++|+|||||||+||-+.+..+.+.+++++ |++... ... ++.++|...+..+ +.+.+.
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~~-------~~~------~~~~~g~~~~~~~--~~~~~~ 64 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASL------GVDISR-------REE------LPDTLGLRIDQVV--DLWYAR 64 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHC------CCCCCH-------HHH------HHHhhCCCHHHHH--HHHHHh
Confidence 3489999999999999999999999999988 333210 123 4445565554432 211110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
. . +......+....+++.+.+.+ .....+|||+.++|+ ++
T Consensus 65 ~-----------~----------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~l~~~ 107 (222)
T PRK10826 65 Q-----------P----------------------WNGPSRQEVVQRIIARVISLI----EETRPLLPGVREALALCKAQ 107 (222)
T ss_pred c-----------C----------------------CCCCCHHHHHHHHHHHHHHHH----hcCCCCCCCHHHHHHHHHHC
Confidence 0 0 000001122233333333222 234789999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++|+||+....++.+++. +|+..+|+.+++++ .||+|+++..+++++|++|++|+|||||.+|+++|++
T Consensus 108 g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~--- 183 (222)
T PRK10826 108 GLKIGLASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKA--- 183 (222)
T ss_pred CCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHH---
Confidence 999999999999999999996 99999999999875 3599999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
||+++|+|.++....+.. .. .++.++.|+.+|..
T Consensus 184 -aG~~~i~v~~~~~~~~~~-~~--~~~~~~~~~~dl~~ 217 (222)
T PRK10826 184 -ARMRSIVVPAPEQQNDPR-WA--LADVKLESLTELTA 217 (222)
T ss_pred -cCCEEEEecCCccCchhh-hh--hhheeccCHHHHhh
Confidence 999999999997654332 22 35689999999943
No 18
>PLN02940 riboflavin kinase
Probab=99.96 E-value=4.4e-29 Score=236.22 Aligned_cols=199 Identities=12% Similarity=0.048 Sum_probs=150.0
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+++.+++++ |.+.. .++ ++.++|......+ .+.+..
T Consensus 12 k~VIFDlDGTLvDt~~~~~~a~~~~~~~~------G~~~~--------~~~------~~~~~G~~~~~~~-~~~~~~--- 67 (382)
T PLN02940 12 SHVILDLDGTLLNTDGIVSDVLKAFLVKY------GKQWD--------GRE------AQKIVGKTPLEAA-ATVVED--- 67 (382)
T ss_pred CEEEECCcCcCCcCHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHhcCCCHHHHH-HHHHHH---
Confidence 68999999999999999999999999988 44321 122 4446676554432 122211
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
++.+ ...++....+++.+.+++ ....+|||+.++|+ ++|+
T Consensus 68 -------------------------------~~~~-~~~~~~~~~~~~~~~~~~-----~~~~l~pGv~elL~~Lk~~g~ 110 (382)
T PLN02940 68 -------------------------------YGLP-CSTDEFNSEITPLLSEQW-----CNIKALPGANRLIKHLKSHGV 110 (382)
T ss_pred -------------------------------hCCC-CCHHHHHHHHHHHHHHHH-----ccCCCCcCHHHHHHHHHHCCC
Confidence 0100 001112223333333322 24689999999999 7999
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||+++..++..|+.++|+..+|+.|++++ .||+|+++..+++++|++|++|+|||||..|+++|++ |
T Consensus 111 ~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~----a 186 (382)
T PLN02940 111 PMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKA----A 186 (382)
T ss_pred cEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHH----c
Confidence 9999999999999998873389999999999876 3699999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
||++|+|.||+.+.. . ...|+..+.++.+|.
T Consensus 187 Gi~~I~v~~g~~~~~--~--~~~ad~~i~sl~el~ 217 (382)
T PLN02940 187 GMEVIAVPSIPKQTH--L--YSSADEVINSLLDLQ 217 (382)
T ss_pred CCEEEEECCCCcchh--h--ccCccEEeCCHhHcC
Confidence 999999999986542 2 245779999999875
No 19
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.96 E-value=7.9e-29 Score=239.59 Aligned_cols=207 Identities=16% Similarity=0.219 Sum_probs=150.6
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCC-CCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHh
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWP-SLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLE 79 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~-~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~ 79 (274)
|.++|+|||||||+||.+.+..+.+++++++.. ......++ .+. ++.++|......+ .+.+..
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~---------~~~------~~~~~G~~~~~~~-~~l~~~ 303 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP---------IDK------YREIMGVPLPKVW-EALLPD 303 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC---------HHH------HHHHcCCChHHHH-HHHhhh
Confidence 558999999999999999999999999999821 10000111 123 4556776665433 122100
Q ss_pred cccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---h
Q 024003 80 MRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---L 156 (274)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~ 156 (274)
. ..+..++....+++.|.+.. .....++|||+.++|+ +
T Consensus 304 ----------------------------------~--~~~~~~~~~~~~~~~~~~~~---~~~~~~l~pG~~e~L~~Lk~ 344 (459)
T PRK06698 304 ----------------------------------H--SLEIREQTDAYFLERLIENI---KSGKGALYPNVKEIFTYIKE 344 (459)
T ss_pred ----------------------------------c--chhHHHHHHHHHHHHhHHHH---hhcCCCcCCCHHHHHHHHHH
Confidence 0 00000111122223222211 1234689999999998 7
Q ss_pred CCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC---CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 157 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 157 ~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~---~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
+|++++|+||++...++.+|++ +|+..||+.+++++. +|||+++..++++++ |++|+|||||.+|+++|++
T Consensus 345 ~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~--- 418 (459)
T PRK06698 345 NNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKD--- 418 (459)
T ss_pred CCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHH---
Confidence 8999999999999999999995 999999999998763 499999999998865 6899999999999999998
Q ss_pred cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 234 LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||+++|+|.||++..+++ ..|++++.++.+|...+
T Consensus 419 -AG~~~I~v~~~~~~~~~~----~~~d~~i~~l~el~~~l 453 (459)
T PRK06698 419 -NGLIAIGCNFDFAQEDEL----AQADIVIDDLLELKGIL 453 (459)
T ss_pred -CCCeEEEEeCCCCccccc----CCCCEEeCCHHHHHHHH
Confidence 999999999999766544 24789999999987654
No 20
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.96 E-value=1.9e-28 Score=213.54 Aligned_cols=121 Identities=21% Similarity=0.235 Sum_probs=105.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
..++|||+.++|+ ++|++++|+||++...+...|++ +|+..||+.|++++ .||+|+++..+++++|++|+++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 3689999999999 78999999999999999999996 99999999999764 3699999999999999999999
Q ss_pred EEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 216 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 216 l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
+|||||. +|+++|++ +|+.+|+|.||+....+.. ....|++++.++.++
T Consensus 171 ~~igDs~~~di~~A~~----aG~~~i~~~~~~~~~~~~~-~~~~~~~~i~~~~el 220 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKN----LGMKTVWINQGKSSKMEDD-VYPYPDYEISSLREL 220 (221)
T ss_pred EEECCChHHHHHHHHH----CCCEEEEECCCCCcccccc-cccCCCeeeCcHHhh
Confidence 9999998 89999998 9999999999987543322 234577999888775
No 21
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.96 E-value=2.3e-28 Score=213.56 Aligned_cols=200 Identities=13% Similarity=0.068 Sum_probs=142.6
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+.+.+++++ |++... + +. .+.+.|......+ .+.+.
T Consensus 5 ~~viFD~DGTL~d~~~~~~~a~~~~~~~~------g~~~~~-----~--~~------~~~~~g~~~~~~~-~~~~~---- 60 (221)
T PRK10563 5 EAVFFDCDGTLVDSEVICSRAYVTMFAEF------GITLSL-----E--EV------FKRFKGVKLYEII-DIISK---- 60 (221)
T ss_pred CEEEECCCCCCCCChHHHHHHHHHHHHHc------CCCCCH-----H--HH------HHHhcCCCHHHHH-HHHHH----
Confidence 89999999999999999999999999888 443211 0 11 2334454433322 12221
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhcc--CHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHHhCCCc
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSR 160 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~~~g~~ 160 (274)
.++. +.++ ....|++.+.+.+ ....++||||.++|+.-+++
T Consensus 61 ------------------------------~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~gv~~~L~~L~~~ 103 (221)
T PRK10563 61 ------------------------------EHGVTLAKAE---LEPVYRAEVARLF----DSELEPIAGANALLESITVP 103 (221)
T ss_pred ------------------------------HhCCCCCHHH---HHHHHHHHHHHHH----HccCCcCCCHHHHHHHcCCC
Confidence 1111 1111 1122333333222 23478999999999966799
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCc-eEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPD-RLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~-~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
++|+||++...++..|++ +|+..+|+ .|++++ .||+|+++..++++++++|++|+||||+..||++|++ |
T Consensus 104 ~~ivTn~~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~----a 178 (221)
T PRK10563 104 MCVVSNGPVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIA----A 178 (221)
T ss_pred EEEEeCCcHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----C
Confidence 999999999999999996 99999995 566653 3699999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
|+++|++.++..... .. ..|..++.++.+|...
T Consensus 179 G~~~i~~~~~~~~~~-~~---~~~~~~~~~~~~l~~~ 211 (221)
T PRK10563 179 GMEVFYFCADPHNKP-ID---HPLVTTFTDLAQLPEL 211 (221)
T ss_pred CCEEEEECCCCCCcc-hh---hhhhHHHHHHHHHHHH
Confidence 999999987655432 22 1234567888777643
No 22
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.96 E-value=3.5e-28 Score=206.81 Aligned_cols=175 Identities=14% Similarity=0.107 Sum_probs=127.4
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+.+.+++++ |++.. ... ++.+.|......+ +.+....
T Consensus 6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~--~~~~~~~- 62 (188)
T PRK10725 6 AGLIFDMDGTILDTEPTHRKAWREVLGRY------GLQFD--------EQA------MVALNGSPTWRIA--QAIIELN- 62 (188)
T ss_pred eEEEEcCCCcCccCHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHhcCCCHHHHH--HHHHHHh-
Confidence 78999999999999999999999999998 44321 122 3445565443322 2221100
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hCCCc
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSR 160 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~g~~ 160 (274)
+. ..+.+++... +...|.+. ......+|||+ ++|+ .++++
T Consensus 63 ----------~~--------------------~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~-e~L~~L~~~~~ 104 (188)
T PRK10725 63 ----------QA--------------------DLDPHALARE---KTEAVKSM----LLDSVEPLPLI-EVVKAWHGRRP 104 (188)
T ss_pred ----------CC--------------------CCCHHHHHHH---HHHHHHHH----HhccCCCccHH-HHHHHHHhCCC
Confidence 00 0011111111 11122211 12345789975 7787 56699
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCC
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 236 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 236 (274)
++|+||+++..++..|++ +|+..||+.|++++ .||+|+++..++++++++|++|+||||+.+|+++|++ ||
T Consensus 105 l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~----aG 179 (188)
T PRK10725 105 MAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARA----AG 179 (188)
T ss_pred EEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHH----CC
Confidence 999999999999999996 99999999999875 3699999999999999999999999999999999998 99
Q ss_pred CcEEEEe
Q 024003 237 WNLYLVD 243 (274)
Q Consensus 237 v~~i~v~ 243 (274)
+++|+|.
T Consensus 180 ~~~i~~~ 186 (188)
T PRK10725 180 MDAVDVR 186 (188)
T ss_pred CEEEeec
Confidence 9999985
No 23
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.96 E-value=4.9e-28 Score=204.99 Aligned_cols=178 Identities=18% Similarity=0.170 Sum_probs=130.9
Q ss_pred eEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcccc
Q 024003 4 LYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRLP 83 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~~ 83 (274)
+|+|||||||+||.+....+.+.+++.+ |++.. ... .+.+.|.+....+ .+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~-~~~~~~~--- 56 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADEL------GIPFD--------EEF------NESLKGVSREDSL-ERILDLG--- 56 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHc------CCCCC--------HHH------HHHhcCCChHHHH-HHHHHhc---
Confidence 5899999999999999999999999888 44421 112 3345565544433 1222110
Q ss_pred cccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCc
Q 024003 84 SLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSR 160 (274)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~ 160 (274)
+. .++++..++....+.+.|.+.+.. ....++||||.++|+ ++|++
T Consensus 57 ---------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~ 105 (185)
T TIGR01990 57 ---------GK--------------------KYSEEEKEELAERKNDYYVELLKE--LTPADVLPGIKNLLDDLKKNNIK 105 (185)
T ss_pred ---------CC--------------------CCCHHHHHHHHHHHHHHHHHHHHh--cCCcccCccHHHHHHHHHHCCCe
Confidence 10 012233333444444555444322 123589999999999 79999
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCC
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 236 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 236 (274)
++|+||+.. ....|++ +|+..+|+.+++++ .||+|+++.+++++++++|++|+||||+.+|+++|++ +|
T Consensus 106 ~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~----aG 178 (185)
T TIGR01990 106 IALASASKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKA----AG 178 (185)
T ss_pred EEEEeCCcc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHH----cC
Confidence 999999764 4678996 99999999999765 3699999999999999999999999999999999998 99
Q ss_pred CcEEEEe
Q 024003 237 WNLYLVD 243 (274)
Q Consensus 237 v~~i~v~ 243 (274)
|++|+|+
T Consensus 179 ~~~i~v~ 185 (185)
T TIGR01990 179 MFAVGVG 185 (185)
T ss_pred CEEEecC
Confidence 9999984
No 24
>PRK09449 dUMP phosphatase; Provisional
Probab=99.96 E-value=5.4e-28 Score=211.48 Aligned_cols=122 Identities=19% Similarity=0.221 Sum_probs=105.4
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCC-CCcE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~-~~~~ 215 (274)
..++|||+.++|+ .+|++++|+||++...++..|++ +|+..+|+.|++++ .||+|+++.++++++|+. +++|
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3679999999999 77899999999999999999996 99999999999865 369999999999999985 4799
Q ss_pred EEEcCCh-hHHHHhhccCccCCCcEEEEeCC-CCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 216 HFVEDRL-ATLKNVIKEPELDGWNLYLVDWG-YNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 216 l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wG-y~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
+||||+. +|+++|++ ||+++|++.|+ +... . ...|++.+.++.+|.+.||
T Consensus 172 ~~vgD~~~~Di~~A~~----aG~~~i~~~~~~~~~~---~--~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 172 LMVGDNLHSDILGGIN----AGIDTCWLNAHGREQP---E--GIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred EEEcCCcHHHHHHHHH----CCCcEEEECCCCCCCC---C--CCCCeEEECCHHHHHHHHh
Confidence 9999998 69999998 99999999854 3222 1 2357899999999987764
No 25
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.96 E-value=2.7e-28 Score=209.76 Aligned_cols=117 Identities=13% Similarity=0.074 Sum_probs=98.6
Q ss_pred CCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCC----CCceEecCC-CCCcHHHHHHHHhhCCCCCCc
Q 024003 142 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI----TPDRLYGLG-TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 142 ~~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~----~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~ 214 (274)
...++|||+.++|+ +++++++++||++......++++ +++.. +|+.++|.+ .+|||+++..+++++| |++
T Consensus 71 ~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~ 147 (197)
T PHA02597 71 RYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRV 147 (197)
T ss_pred HhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCc
Confidence 34679999999999 44568999999998877777774 77764 567777755 4699999999999999 889
Q ss_pred EEEEcCChhHHHHhhccCccC--CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 215 LHFVEDRLATLKNVIKEPELD--GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~~~~~~A--gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
++|||||.+|+++|++ | ||++|+|+||+. ...+.|.+.+.|+.++.+
T Consensus 148 ~v~vgDs~~di~aA~~----a~~Gi~~i~~~~~~~------~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 148 VCFVDDLAHNLDAAHE----ALSQLPVIHMLRGER------DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred EEEeCCCHHHHHHHHH----HHcCCcEEEecchhh------ccccchhhhhccHHHHhc
Confidence 9999999999999998 8 999999999975 345577799999999875
No 26
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.95 E-value=2.1e-27 Score=206.67 Aligned_cols=121 Identities=17% Similarity=0.270 Sum_probs=107.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhC-CCCCCc
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP-EHQGLR 214 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l-~~~~~~ 214 (274)
..++|||+.++|+ ++ ++++|+||++...++.+|++ +|+..+|+.|++++ .||+|+++.++++++ |++|++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 4689999999999 45 99999999999999999996 99999999999865 369999999999999 999999
Q ss_pred EEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 215 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 215 ~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++||||+. +|+++|++ +||++|+++||+.+. . ....|++++.++.+|.+.|
T Consensus 173 ~v~igD~~~~di~~A~~----~G~~~i~~~~~~~~~--~--~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 173 VLMIGDSLTADIKGGQN----AGLDTCWMNPDMHPN--P--DDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred eEEECCCcHHHHHHHHH----CCCcEEEECCCCCCC--C--CCCCCceEECCHHHHHhhC
Confidence 99999998 79999998 999999999997653 1 2356889999999998653
No 27
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.95 E-value=1.8e-27 Score=201.59 Aligned_cols=177 Identities=16% Similarity=0.134 Sum_probs=130.0
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+....+.+.+++++ |++. + ... ...+.|......+ ...+...
T Consensus 2 ~~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~-~-------~~~------~~~~~g~~~~~~~-~~~~~~~-- 58 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAPLHAQAWKHLADKY------GIEF-D-------KQY------NTSLGGLSREDIL-RAILKLR-- 58 (185)
T ss_pred CeEEEcCCCcccCChHHHHHHHHHHHHHc------CCCC-C-------HHH------HHHcCCCCHHHHH-HHHHHhc--
Confidence 78999999999999999999999999888 3431 1 112 2335554443322 1221110
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+ .++++++..+....+.+.|.+..+ .....+|||+.++|+ ++|+
T Consensus 59 ----------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~ 105 (185)
T TIGR02009 59 ----------K--------------------PGLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGI 105 (185)
T ss_pred ----------C--------------------CCCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCC
Confidence 0 012333333333334444333221 234789999999998 7899
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
+++|+||+ ..++.+|++ +|+..+|+.++|++ .||+|+++.+++++++++|++++|||||..|+++|++ +
T Consensus 106 ~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~----~ 178 (185)
T TIGR02009 106 AVGLGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARA----A 178 (185)
T ss_pred eEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHH----C
Confidence 99999999 668999996 99999999999865 3599999999999999999999999999999999998 8
Q ss_pred CCcEEEE
Q 024003 236 GWNLYLV 242 (274)
Q Consensus 236 gv~~i~v 242 (274)
|+++|+|
T Consensus 179 G~~~i~v 185 (185)
T TIGR02009 179 GMFAVAV 185 (185)
T ss_pred CCeEeeC
Confidence 9999986
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.95 E-value=3.1e-27 Score=209.79 Aligned_cols=221 Identities=11% Similarity=0.097 Sum_probs=143.6
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
|+|+|||||||+||.+-+..+.+.+++.+....+ .+.... ....+. ++..++.......
T Consensus 11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~-~~~~~~----~~~~~~------~~~~~~~~~~~~~---------- 69 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVILRTEQEALAFVQNYHP-ALRSFQ----NEDLQR------LRQALREAEPEIY---------- 69 (238)
T ss_pred eeEEEcCcccccCChHHHHHHHHHHHHHHHHhCc-chhhCC----HHHHHH------HHHHHHHhCchhh----------
Confidence 7999999999999999999999988876610000 010000 011112 1111111110000
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH--hCCCc
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSR 160 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~--~~g~~ 160 (274)
..+...........+..+|++.+..+.....+.+.|.. |.....+||||.++|+ +++++
T Consensus 70 --------------~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gv~~~L~~L~~~~~ 130 (238)
T PRK10748 70 --------------HDVTRWRWRAIEQAMLDAGLSAEEASAGADAAMINFAK-----WRSRIDVPQATHDTLKQLAKKWP 130 (238)
T ss_pred --------------CcHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----HhhcCCCCccHHHHHHHHHcCCC
Confidence 00000111122334455565544432223333333322 2234689999999999 66799
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCC-hhHHHHhhccCccC
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELD 235 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~A 235 (274)
++|+||++.. ++. +|+..||+.|++++ .||+|+++..+++++|++|++|+||||+ ..|+.+|++ +
T Consensus 131 l~i~Tn~~~~-----~~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~----a 200 (238)
T PRK10748 131 LVAITNGNAQ-----PEL-FGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIR----C 200 (238)
T ss_pred EEEEECCCch-----HHH-CCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHH----C
Confidence 9999998876 474 99999999999865 3699999999999999999999999999 599999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|+++|+|.-+.+...........|+..+.++.+|.+.|
T Consensus 201 G~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 201 GMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred CCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 99999998765432111112245889999999987654
No 29
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.94 E-value=2.1e-26 Score=241.25 Aligned_cols=202 Identities=17% Similarity=0.243 Sum_probs=151.8
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
++|+|||||||+||.+.+..+++.+++++ |++.. .+. ++.++|.+...++ +.+....
T Consensus 76 kaVIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~it--------~e~------~~~~~G~~~~~~~--~~~~~~~- 132 (1057)
T PLN02919 76 SAVLFDMDGVLCNSEEPSRRAAVDVFAEM------GVEVT--------VED------FVPFMGTGEANFL--GGVASVK- 132 (1057)
T ss_pred CEEEECCCCCeEeChHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHhCCCHHHHH--HHHHHhc-
Confidence 78999999999999999999999999998 44421 122 3446666654332 1111100
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
+.. +++.+ +..+.+.+.|.+.|... ....+|||+.++|+ ++|+
T Consensus 133 ----------~l~-------------------~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~ 178 (1057)
T PLN02919 133 ----------GVK-------------------GFDPD---AAKKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGL 178 (1057)
T ss_pred ----------CCC-------------------CCCHH---HHHHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCC
Confidence 000 00111 11223333444333221 12358999999999 7999
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCC-CCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCcc
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVT-ITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 234 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~-~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~ 234 (274)
+++|+||+....++.+|++ +|+. .+|+.+++.+ .||+|+++++++++++++|++|+||||+..|+++|++
T Consensus 179 ~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~---- 253 (1057)
T PLN02919 179 KVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARA---- 253 (1057)
T ss_pred eEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHH----
Confidence 9999999999999999996 9996 7899999876 3699999999999999999999999999999999998
Q ss_pred CCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 235 DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 235 Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
|||++|+|.||+ +.+++..++ |++++.++.++
T Consensus 254 aGm~~I~v~~~~-~~~~L~~~~--a~~vi~~l~el 285 (1057)
T PLN02919 254 AGMRCIAVTTTL-SEEILKDAG--PSLIRKDIGNI 285 (1057)
T ss_pred cCCEEEEECCCC-CHHHHhhCC--CCEEECChHHC
Confidence 999999999997 567787665 66999999887
No 30
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.94 E-value=3.9e-26 Score=194.31 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=86.7
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC--------CCCcHHHHHHHHhhCCCCCCc
Q 024003 143 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--------TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 143 ~~~lypGv~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~--------~~pkp~~l~~~l~~l~~~~~~ 214 (274)
..++|||+.++|+.-..+++|+||++...+...|++ +|+..+|+.|++++ .||+|+++.++++++|++|++
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 457999999999943378999999999999999996 99999999999864 279999999999999999999
Q ss_pred EEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 215 LHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
++||||+..|+++|++ +|+++|+|
T Consensus 161 ~l~vgD~~~di~aA~~----~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKA----LGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHH----cCCEEeeC
Confidence 9999999999999998 99999876
No 31
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.94 E-value=1.2e-25 Score=197.85 Aligned_cols=205 Identities=18% Similarity=0.186 Sum_probs=143.7
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhc
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEM 80 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~ 80 (274)
|.++||||+|||||||.+-...+...+++++ |++.. .+. .+...|.+....+ ..+...
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~g~~~~~~~--~~~~~~ 58 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEY------GIEIS--------DEE------IRELHGGGIARII--DLLRKL 58 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHc------CCCCC--------HHH------HHHHHCCChHHHH--HHHHHH
Confidence 5799999999999999999999999999999 44321 112 3334454432222 222110
Q ss_pred ccccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hC
Q 024003 81 RLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 157 (274)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~ 157 (274)
.. +... ...... -..+++.. .......+++|||.++|+ ++
T Consensus 59 ~~----------~~~~-------------------~~~~~~---~~~~~~~~-----~~~~~~~~~~pGv~~~l~~L~~~ 101 (221)
T COG0637 59 AA----------GEDP-------------------ADLAEL---ERLLYEAE-----ALELEGLKPIPGVVELLEQLKAR 101 (221)
T ss_pred hc----------CCcc-------------------cCHHHH---HHHHHHHH-----HhhhcCCCCCccHHHHHHHHHhc
Confidence 00 0000 000000 00011111 112334689999999999 78
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
|++++++||.++..++.+|+. +|+..||+.++.++ .||+|++++++.+++|++|++||.|+||.+.|++|++
T Consensus 102 ~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~a--- 177 (221)
T COG0637 102 GIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKA--- 177 (221)
T ss_pred CCcEEEecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHH---
Confidence 899999999999999999996 99999999988754 4699999999999999999999999999999999998
Q ss_pred cCCCcEEEEeCCCCC--hHHHHhcCCCCCceeechhHHHh
Q 024003 234 LDGWNLYLVDWGYNT--PKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 234 ~Agv~~i~v~wGy~~--~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
|||.+|++.-+... ...+..... +..+.++..+..
T Consensus 178 -AGm~vv~v~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 214 (221)
T COG0637 178 -AGMRVVGVPAGHDRPHLDPLDAHGA--DTVLLDLAELPA 214 (221)
T ss_pred -CCCEEEEecCCCCccccchhhhhhc--chhhccHHHHHH
Confidence 99999999986543 223333333 366666666654
No 32
>PLN02811 hydrolase
Probab=99.94 E-value=1.5e-25 Score=196.32 Aligned_cols=194 Identities=14% Similarity=0.094 Sum_probs=138.0
Q ss_pred cCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccccccccc
Q 024003 9 FDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRLPSLRKS 88 (274)
Q Consensus 9 lDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~~~~~~~ 88 (274)
|||||+||.+.+..+++.+++++ |++.. .+. ++.++|......+ ...+...
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~--------~~~------~~~~~G~~~~~~~-~~~~~~~-------- 51 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARY------GKTFD--------WSL------KAKMMGKKAIEAA-RIFVEES-------- 51 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHc------CCCCC--------HHH------HHHccCCCHHHHH-HHHHHHh--------
Confidence 79999999999999999999998 44321 123 4557787665433 1222110
Q ss_pred ccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEc
Q 024003 89 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 165 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvT 165 (274)
+.+.+ ...+++.+ .++.+...+ .....+||||.++|+ ++|++++|+|
T Consensus 52 ----~~~~~------------------~~~~~~~~----~~~~~~~~~----~~~~~l~~gv~e~l~~L~~~g~~~~i~S 101 (220)
T PLN02811 52 ----GLSDS------------------LSPEDFLV----EREAMLQDL----FPTSDLMPGAERLVRHLHAKGIPIAIAT 101 (220)
T ss_pred ----CCCCC------------------CCHHHHHH----HHHHHHHHH----HhhCCCCccHHHHHHHHHHCCCcEEEEe
Confidence 00000 01111111 122222111 124689999999999 7899999999
Q ss_pred CCchHHHH-HHHHHHhCCCCCCceEecCC------CCCcHHHHHHHHhhCC---CCCCcEEEEcCChhHHHHhhccCccC
Q 024003 166 SNQSRFVE-TLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPE---HQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 166 nK~~~~~~-~iL~~~~gl~~~f~~v~g~~------~~pkp~~l~~~l~~l~---~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
|++..... .+++ +.++..+|+.+++++ .||+|+++..++++++ ++|++|+||||+..|+++|++ |
T Consensus 102 ~~~~~~~~~~~~~-~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~----a 176 (220)
T PLN02811 102 GSHKRHFDLKTQR-HGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN----A 176 (220)
T ss_pred CCchhhHHHHHcc-cHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHH----C
Confidence 99876444 4555 367888999999866 2699999999999996 999999999999999999998 9
Q ss_pred CCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 236 GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
|+++|+|.||+.+...+ ..|+.++.++.+|.
T Consensus 177 G~~~i~v~~~~~~~~~~----~~~d~vi~~~~e~~ 207 (220)
T PLN02811 177 GMSVVMVPDPRLDKSYC----KGADQVLSSLLDFK 207 (220)
T ss_pred CCeEEEEeCCCCcHhhh----hchhhHhcCHhhCC
Confidence 99999999998765433 25778999888763
No 33
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.94 E-value=5.5e-26 Score=195.68 Aligned_cols=85 Identities=15% Similarity=0.088 Sum_probs=77.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC---CCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~---~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
.+.|++.++|+ ++|++++|+||+++..++.+|++ +|+..+|+.+++++. ||+|+++..+++++|++|++|+||
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 45566689998 68999999999999999999996 999999999998653 699999999999999999999999
Q ss_pred cCChhHHHHhhc
Q 024003 219 EDRLATLKNVIK 230 (274)
Q Consensus 219 GDs~~Di~aA~~ 230 (274)
||+.+|+++|++
T Consensus 185 GD~~~Di~aA~~ 196 (197)
T TIGR01548 185 GDTVDDIITGRK 196 (197)
T ss_pred eCCHHHHHHHHh
Confidence 999999999986
No 34
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.93 E-value=9e-26 Score=198.93 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=94.8
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCc
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~ 214 (274)
...++|||+.++|+ ++|++++|+||++...++..+++ +|+..+|+.|++++ .||+|++++++++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 34789999999999 78999999999999999999995 99999999999865 369999999999999999999
Q ss_pred EEEEcCChhHHHHhhccCccCCCc-EEEEeCCCCChH
Q 024003 215 LHFVEDRLATLKNVIKEPELDGWN-LYLVDWGYNTPK 250 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~~~~~~Agv~-~i~v~wGy~~~~ 250 (274)
|+|||||..|+++|++ |||+ +++|++|.+...
T Consensus 169 ~l~igDs~~di~aA~~----aG~~~~~~v~~~~~~~~ 201 (224)
T PRK14988 169 TLFIDDSEPILDAAAQ----FGIRYCLGVTNPDSGIA 201 (224)
T ss_pred EEEEcCCHHHHHHHHH----cCCeEEEEEeCCCCCcc
Confidence 9999999999999998 9998 689999986543
No 35
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.93 E-value=2.7e-25 Score=191.59 Aligned_cols=92 Identities=17% Similarity=0.239 Sum_probs=83.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
.++|||+.++|+ ++|++++|+||++.. .+..|++ +|+..+|+.|++++ .||+|+++.++++++|++|++++
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 589999999999 689999999999876 4788996 99999999999865 36999999999999999999999
Q ss_pred EEcCCh-hHHHHhhccCccCCCcEEE
Q 024003 217 FVEDRL-ATLKNVIKEPELDGWNLYL 241 (274)
Q Consensus 217 ~VGDs~-~Di~aA~~~~~~Agv~~i~ 241 (274)
||||+. +|+++|++ +|+.+|+
T Consensus 182 ~IgD~~~~Di~~A~~----aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARA----AGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHH----cCCeeeC
Confidence 999997 89999998 8998873
No 36
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.92 E-value=3.1e-24 Score=184.45 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=90.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
.++|||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.|++++ .||+|+++.++++++|++|++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 579999999999 67999999999999999999996 99999999999865 36999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
||||+.+|+++|++ +|+++|+|.-+
T Consensus 170 ~vgD~~~Di~~A~~----~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGAKK----FGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHHHH----CCCcEEEecCC
Confidence 99999999999998 99999999764
No 37
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.92 E-value=9.8e-25 Score=189.37 Aligned_cols=107 Identities=15% Similarity=0.098 Sum_probs=91.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH--HHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRF--VETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~--~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~ 213 (274)
..++|||+.++|+ ++|++++|+||++... ....+.+ +++..+|+.|++++ .||+|+++..+++++|++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4689999999999 6899999999997654 4444553 68888999999764 36999999999999999999
Q ss_pred cEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 214 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
+|+||||+..|+++|++ +|+++|+|.++....++|..
T Consensus 171 ~~l~i~D~~~di~aA~~----aG~~~i~v~~~~~~~~~l~~ 207 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAA----LGITTIKVSDEEQAIHDLEK 207 (211)
T ss_pred HeEEEcCCHHHHHHHHH----cCCEEEEECCHHHHHHHHHH
Confidence 99999999999999998 99999999887666665554
No 38
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.92 E-value=1.5e-24 Score=179.55 Aligned_cols=95 Identities=19% Similarity=0.263 Sum_probs=88.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
..++|||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++++ .||+|+.+..+++++|++|+++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4689999999999 59999999999999999999996 99999999999764 3699999999999999999999
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
+||||+..|+++|++ +|+++|+|
T Consensus 154 ~~vgD~~~d~~~A~~----~G~~~i~v 176 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKE----AGIKTIWV 176 (176)
T ss_dssp EEEESSHHHHHHHHH----TTSEEEEE
T ss_pred EEEeCCHHHHHHHHH----cCCeEEeC
Confidence 999999999999998 99999986
No 39
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.92 E-value=2.1e-24 Score=191.79 Aligned_cols=99 Identities=9% Similarity=-0.013 Sum_probs=85.6
Q ss_pred CCCCCCCccHHHHHH---hCCCcEEEEcCC----chHHHHHHHHHHhCCCCCCceEecCCC--CCcHHHHHHHHhhCCCC
Q 024003 141 IGANRLYPGVSDALK---LASSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQ 211 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g~~laIvTnK----~~~~~~~iL~~~~gl~~~f~~v~g~~~--~pkp~~l~~~l~~l~~~ 211 (274)
...+.++||+.|+|+ ++|++++||||| ++..++.++++ +|+..+|+.++|++. +|||++. .+++++++
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i- 186 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI- 186 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHH-HHHHhCCC-
Confidence 345789999999999 899999999998 88899999995 999999999999764 2556555 45667776
Q ss_pred CCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCCh
Q 024003 212 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 249 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~ 249 (274)
++||||+.+|+.+|++ ||+++|+|+|||++.
T Consensus 187 ---~i~vGDs~~DI~aAk~----AGi~~I~V~~g~~s~ 217 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKE----AGARGIRILRASNST 217 (237)
T ss_pred ---eEEEeCCHHHHHHHHH----CCCCEEEEEecCCCC
Confidence 6999999999999998 999999999999875
No 40
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.89 E-value=1.3e-22 Score=167.41 Aligned_cols=85 Identities=19% Similarity=0.222 Sum_probs=78.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC---CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~---~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
...++||+.++|+ ++|++++|+||++...+...++. + +..+|+.+++.+ .||+|+++.+++++++++| +|+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 3467899999999 68999999999999999999995 7 888999999865 3699999999999999999 999
Q ss_pred EEcCChhHHHHhhc
Q 024003 217 FVEDRLATLKNVIK 230 (274)
Q Consensus 217 ~VGDs~~Di~aA~~ 230 (274)
||||+..|+++|++
T Consensus 139 ~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 139 HVGDNLNDIEGARN 152 (154)
T ss_pred EEeCCHHHHHHHHH
Confidence 99999999999997
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.89 E-value=2.4e-22 Score=173.35 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=93.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..+|||+.++|+ ++|++++|+||++.......+..+.++..+|+.|++++ .||+|++++.+++++|++|++|+
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 368999999999 68999999999999988877764247888999999865 36999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHH
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 253 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~ 253 (274)
||||+..|+++|++ +|+.+|+++++..-.+.|+
T Consensus 163 ~vgD~~~di~aA~~----aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 163 FFDDNADNIEAANA----LGITSILVTDKQTIPDYFA 195 (199)
T ss_pred EeCCCHHHHHHHHH----cCCEEEEecCCccHHHHHH
Confidence 99999999999998 9999999999876665554
No 42
>PLN02954 phosphoserine phosphatase
Probab=99.88 E-value=1.3e-21 Score=171.04 Aligned_cols=120 Identities=18% Similarity=0.334 Sum_probs=93.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC--CCCce---------EecCC-------CCCcHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPDR---------LYGLG-------TGPKVNVLK 202 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~--~~f~~---------v~g~~-------~~pkp~~l~ 202 (274)
.++|||+.++|+ ++|++++|+||+.+..++.+++. +|+. .+|+. +.|.+ .++||++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 469999999999 78999999999999999999996 9996 35532 33322 137999999
Q ss_pred HHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 203 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 203 ~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
.++++++. ++++||||+.+|+.+|++ +|+.++ +.||+....+.... .|++++.++.+|.+.|
T Consensus 162 ~~~~~~~~--~~~i~iGDs~~Di~aa~~----~~~~~~-~~~~~~~~~~~~~~--~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 162 HIKKKHGY--KTMVMIGDGATDLEARKP----GGADLF-IGYGGVQVREAVAA--KADWFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHcCC--CceEEEeCCHHHHHhhhc----CCCCEE-EecCCCccCHHHHh--cCCEEECCHHHHHHhh
Confidence 99998875 689999999999999886 677765 44665433333333 4679999999997754
No 43
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.88 E-value=5.2e-22 Score=167.17 Aligned_cols=93 Identities=22% Similarity=0.247 Sum_probs=85.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
.++|||+.++|+ ++|++++|+||.+... ..++.+ +|+..+|+.|++++ .||+|+++..++++++++|++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 689999999999 6899999999999998 777775 99999999998754 36999999999999999999999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEE
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
||||+..|+++|++ +|+++|+|
T Consensus 162 ~vgD~~~di~aA~~----~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAAKA----AGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHHHH----cCCEEEeC
Confidence 99999999999998 99999975
No 44
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.88 E-value=5.9e-22 Score=168.77 Aligned_cols=122 Identities=23% Similarity=0.217 Sum_probs=98.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEecC-----C----CCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL-----G----TGP 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~g~-----~----~~p 196 (274)
..+|||+.++|+ ++|++++|+||++. .....++++ +|+ +|+.+++. + .||
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCCC
Confidence 468999999999 78999999999973 445567775 777 46766632 1 369
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 197 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 197 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+|+++.++++++|++|++++||||+.+|+++|++ +|+++|+|.||+... .+....+.|++++.++.++...|
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~----aG~~~i~v~~g~~~~-~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAA----AGVTPVLVRTGKGVT-TLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHH----CCCeEEEEcCCCCch-hhhcccCCCceeecCHHHHHHHH
Confidence 9999999999999999999999999999999998 999999999998754 33333322279999999987654
No 45
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.87 E-value=2.5e-22 Score=169.00 Aligned_cols=83 Identities=18% Similarity=0.195 Sum_probs=76.7
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 143 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 143 ~~~lypGv~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
...+|||+.++|+ +++|+||++....+..+++ +|+..+|+.|++++ .||+|++++.+++++|++|++|+||
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 3579999999997 5899999999999999996 99999999988865 3699999999999999999999999
Q ss_pred cCChhHHHHhhc
Q 024003 219 EDRLATLKNVIK 230 (274)
Q Consensus 219 GDs~~Di~aA~~ 230 (274)
||+..|+++|++
T Consensus 163 gD~~~Di~~A~~ 174 (175)
T TIGR01493 163 AAHQWDLIGARK 174 (175)
T ss_pred ecChhhHHHHhc
Confidence 999999999985
No 46
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.85 E-value=3.7e-21 Score=163.50 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=89.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHHhCCC---------CCCceEecCCCC----CcHHHHHHHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAGVT---------ITPDRLYGLGTG----PKVNVLKQLQ 205 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK-~~~~~~~iL~~~~gl~---------~~f~~v~g~~~~----pkp~~l~~~l 205 (274)
...+||||.++|+ ++|++++|+||+ +...++.+|+. +|+. .+|+.+++++.. |.|+++..+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 4689999999999 799999999999 99999999995 9998 999999987632 3445555555
Q ss_pred hhC--CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHH
Q 024003 206 KKP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 252 (274)
Q Consensus 206 ~~l--~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l 252 (274)
+.+ +++|++|+|||||..|+++|++ ||+++++|+||+.-.+.+
T Consensus 122 ~~~~~gl~p~e~l~VgDs~~di~aA~~----aGi~~i~v~~g~~~~~~~ 166 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRTDNVREVWG----YGVTSCYCPSGMDKGTFK 166 (174)
T ss_pred hcccCCCCHHHeEEEcChhHhHHHHHH----hCCEEEEcCCCccHHHHH
Confidence 555 7999999999999999999998 999999999999655443
No 47
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.84 E-value=1.7e-19 Score=157.20 Aligned_cols=117 Identities=16% Similarity=0.146 Sum_probs=91.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceE------------ecCC--CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------------YGLG--TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v------------~g~~--~~pkp~~l~~~l~ 206 (274)
.+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+.. .|.. .+|||+++..+++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 579999999999 68999999999999999999996 9998888532 2211 1379999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHHhhc
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTKL 273 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~~~~ 273 (274)
+++++|++|+||||+.+|+.+|++ ||+++ .|+ ..+.+..+ +++++. ++.++...|
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~----ag~~i---~~~--~~~~~~~~---a~~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKA----AGLGI---AFN--AKPKLQQK---ADICINKKDLTDILPLL 219 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHh----CCCeE---EeC--CCHHHHHh---chhccCCCCHHHHHhhC
Confidence 999999999999999999999998 88864 333 33445432 346655 556665543
No 48
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.84 E-value=1.8e-19 Score=157.23 Aligned_cols=123 Identities=20% Similarity=0.184 Sum_probs=103.9
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcEE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
..++||++.+.|+ .+.++++|+||-........|++ +||..+||.|+.++ .||+|++...+++++|++|++++
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 3689999999999 22288999999999999999996 99999999999865 36999999999999999999999
Q ss_pred EEcCChhHH-HHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 217 FVEDRLATL-KNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 217 ~VGDs~~Di-~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
||||+.... .+|++ +||.+|++.-+.... ......|++.+.++.++...+
T Consensus 176 ~VgD~~~~di~gA~~----~G~~~vwi~~~~~~~---~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 176 FVGDSLENDILGARA----LGMKTVWINRGGKPL---PDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred EECCChhhhhHHHHh----cCcEEEEECCCCCCC---CCCccCCceEEcCHHHHHHHH
Confidence 999987655 99997 999999887775443 222256889999999987654
No 49
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.83 E-value=3.9e-20 Score=159.46 Aligned_cols=117 Identities=13% Similarity=0.116 Sum_probs=87.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe---------cCCCCCcHHHHHHHHhhCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY---------GLGTGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~---------g~~~~pkp~~l~~~l~~l~~ 210 (274)
..++|||+.++|+ ++ ++++|+||+...+++.++++ +|+..+|+..+ |.+ .++|+....++++++.
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~-~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYD-LRQPDGKRQAVKALKS 142 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECcc-ccccchHHHHHHHHHH
Confidence 3679999999999 55 99999999999999999996 99988875432 222 2455555666667777
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCc-eeechhHHHhhc
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRI-QLLQLSDFCTKL 273 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~-~~~~~~~~~~~~ 273 (274)
.+++++|||||.+|+.++++ ||+ +|.|++. +..... .|+. ++.++.+|.+.|
T Consensus 143 ~~~~~v~iGDs~~D~~~~~a----a~~---~v~~~~~--~~~~~~--~~~~~~~~~~~el~~~l 195 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGE----ADA---GILFRPP--ANVIAE--FPQFPAVHTYDELLAAI 195 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHh----CCC---CEEECCC--HHHHHh--CCcccccCCHHHHHHHH
Confidence 78899999999999999997 675 4456653 233322 3445 899999886554
No 50
>PRK06769 hypothetical protein; Validated
Probab=99.83 E-value=1.5e-20 Score=159.49 Aligned_cols=123 Identities=16% Similarity=0.069 Sum_probs=100.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH--------HHHHHHHHHhCCCCCCceEe-cCC----CCCcHHHHHHHHhh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSR--------FVETLLRELAGVTITPDRLY-GLG----TGPKVNVLKQLQKK 207 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~--------~~~~iL~~~~gl~~~f~~v~-g~~----~~pkp~~l~~~l~~ 207 (274)
..+||||.++|+ ++|++++|+||++.. .+...++. +|++.+|..+. +++ .||+|+++.+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 579999999999 789999999999852 23445775 88876654443 322 46999999999999
Q ss_pred CCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCCh------HHHHhcCCCCCceeechhHHHhhc
Q 024003 208 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP------KERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 208 l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~------~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
++++|++|+||||+.+|+++|++ ||+.+|+|.||++.. +++ ....|+.++.++.+|...|
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~~~~~l--~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAK----VNATTILVRTGAGYDALHTYRDKW--AHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHH----CCCeEEEEecCCCchhhhhhhccc--ccCCCcchhhCHHHHHHHH
Confidence 99999999999999999999998 999999999999763 222 2356889999999997644
No 51
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.83 E-value=4.7e-20 Score=163.87 Aligned_cols=107 Identities=12% Similarity=0.055 Sum_probs=86.5
Q ss_pred cccCCCCCCCccHHHHHH---hCCCcEEEEcC----CchHHHHHHHHHHhCC--CCCCceEecCCC--CCcHHHHHHHHh
Q 024003 138 TTWIGANRLYPGVSDALK---LASSRIYIVTS----NQSRFVETLLRELAGV--TITPDRLYGLGT--GPKVNVLKQLQK 206 (274)
Q Consensus 138 ~~~~~~~~lypGv~e~L~---~~g~~laIvTn----K~~~~~~~iL~~~~gl--~~~f~~v~g~~~--~pkp~~l~~~l~ 206 (274)
+++...+.||||+.|+|+ ++|+++++||| |.+..++.+++. +|+ ..+|+.++|++. ||++.. +++
T Consensus 107 ~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~~---~l~ 182 (237)
T PRK11009 107 NGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKTQ---WLK 182 (237)
T ss_pred hcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHHH---HHH
Confidence 334556899999999999 89999999999 567789999985 999 899999998774 344432 455
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChH-HHHhcC
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK-ERAEAA 256 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~-~l~~a~ 256 (274)
++++ ++||||+.+|+++|++ ||+++|+|.|||++.- .+..+|
T Consensus 183 ~~~i----~I~IGDs~~Di~aA~~----AGi~~I~v~~G~~~~~~~~~~~g 225 (237)
T PRK11009 183 KKNI----RIFYGDSDNDITAARE----AGARGIRILRAANSTYKPLPQAG 225 (237)
T ss_pred hcCC----eEEEcCCHHHHHHHHH----cCCcEEEEecCCCCCCCcccccc
Confidence 6665 7999999999999998 9999999999998643 343333
No 52
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.83 E-value=4.6e-20 Score=156.58 Aligned_cols=117 Identities=23% Similarity=0.242 Sum_probs=96.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEecC------------C
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------G 193 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~g~------------~ 193 (274)
.++||||.++|+ ++|++++|+|||+. .....++++ +++. |+.++.. +
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccCC
Confidence 479999999999 79999999999995 455567775 7776 5665421 1
Q ss_pred ---CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE-EEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 194 ---TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 194 ---~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~-i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
.||+|+++.+++++++++|++|+|||||.+||++|++ ||+++ ++|.||+...... ...|+++++|+.+|
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~----aG~~~~i~v~~g~~~~~~~---~~~ad~~i~~~~el 174 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVA----AKVKTNVLVRTGKPITPEA---ENIADWVLNSLADL 174 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHH----CCCcEEEEEecCCcccccc---cccCCEEeccHHHh
Confidence 3699999999999999999999999999999999998 99998 8999998743222 23578999999987
Q ss_pred H
Q 024003 270 C 270 (274)
Q Consensus 270 ~ 270 (274)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 4
No 53
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.83 E-value=4.5e-20 Score=161.72 Aligned_cols=120 Identities=15% Similarity=0.135 Sum_probs=88.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC--CC--ceEecCC----CCCcHHHH----------
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TP--DRLYGLG----TGPKVNVL---------- 201 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~--~f--~~v~g~~----~~pkp~~l---------- 201 (274)
..++|||+.++|+ ++|++++|+||+...+++.+|++ + +.. .+ +..++++ .+|+|++.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 3689999999999 79999999999999999999996 7 643 22 2223332 23666542
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
..++++++..+.+++|||||.+|+.+|++ ||+.++ . + ...+.......|...+.++.++.+.|
T Consensus 150 ~~~l~~~~~~~~~~i~iGDs~~Di~aa~~----Ag~~~a--~-~--~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVIGDSITDLEAAKQ----ADKVFA--R-D--FLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred HHHHHHhccCCCCEEEEeCCHHHHHHHHH----CCccee--H-H--HHHHHHHHcCCCccccCCHHHHHHHH
Confidence 46788889999999999999999999997 888433 2 2 11122122345778889999887665
No 54
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.82 E-value=4.9e-20 Score=148.76 Aligned_cols=95 Identities=31% Similarity=0.323 Sum_probs=82.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc--------hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhC-CCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ--------SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP-EHQ 211 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~--------~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l-~~~ 211 (274)
..+|||+.++|+ ++|++++|+||++ ...++.++++ +|+..++..+.+...||+|+++.++++++ +++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 368999999998 7999999999999 8899999996 99874443333323479999999999999 599
Q ss_pred CCcEEEEcC-ChhHHHHhhccCccCCCcEEEEe
Q 024003 212 GLRLHFVED-RLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 212 ~~~~l~VGD-s~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
|++++|||| +.+|+++|++ +|+++|+|.
T Consensus 103 ~~~~v~IGD~~~~Di~~A~~----~Gi~~i~~~ 131 (132)
T TIGR01662 103 PEESVYVGDQDLTDLQAAKR----AGLAFILVA 131 (132)
T ss_pred hhheEEEcCCCcccHHHHHH----CCCeEEEee
Confidence 999999999 7999999998 999999984
No 55
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.81 E-value=1.1e-19 Score=155.54 Aligned_cols=94 Identities=10% Similarity=-0.001 Sum_probs=79.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-C-------------CCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------GPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~-------------~pkp~~l~~~l~ 206 (274)
.++|||+.++|+ ++|++++|+||+...+++.++++ +|+..+|+.++..+ . .+|++.+.++++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 579999999999 68999999999999999999996 99988776554321 1 134468889999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
++++++++++|||||.+|+.+|++ ||++++.-
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~----ag~~~a~~ 189 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEV----ADISISLG 189 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHh----cCCeEEEC
Confidence 999999999999999999999998 88876554
No 56
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.80 E-value=2.7e-19 Score=147.71 Aligned_cols=97 Identities=27% Similarity=0.255 Sum_probs=81.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCC--CceEec-CC----CCCcH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTIT--PDRLYG-LG----TGPKV 198 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~--f~~v~g-~~----~~pkp 198 (274)
.++|||+.++|+ ++|++++|+||+++ ..+..+|++ +|+... |..+.+ .+ .||+|
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCCH
Confidence 368999999999 79999999999984 577888995 998632 222222 22 36999
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 199 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 199 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
+++.+++++++++|++|+||||+..|+++|++ +|+++|++.-|
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~----~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAARN----AGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHH----CCCCEEEecCC
Confidence 99999999999999999999999999999998 99999998654
No 57
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.78 E-value=4.4e-19 Score=159.55 Aligned_cols=125 Identities=10% Similarity=0.033 Sum_probs=106.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecC---C----CCCcHHHHHHHHhhCCCCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G----TGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~---~----~~pkp~~l~~~l~~l~~~~~ 213 (274)
.-.|+++.+++. +.+++++|+|||+..+....+.. +|+..+|+.+.+. . .||+|+++..++++++++|+
T Consensus 119 ~~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~ 197 (257)
T TIGR01458 119 HFSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPE 197 (257)
T ss_pred ccCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChh
Confidence 345899999888 57899999999999988888874 8888888877753 2 26999999999999999999
Q ss_pred cEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 214 RLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 214 ~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+++||||+. +||.+|++ +|+++++|.||+....+.+.....|++++.++.+|.+.|
T Consensus 198 ~~~~vGD~~~~Di~~a~~----~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 198 EAVMIGDDCRDDVGGAQD----CGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred hEEEECCCcHHHHHHHHH----cCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 999999996 99999998 999999999997665555555667899999999997643
No 58
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.76 E-value=2.4e-18 Score=145.29 Aligned_cols=90 Identities=23% Similarity=0.274 Sum_probs=76.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHHhCCCCCCceEecC-C---CCCcHHHHHHHH
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGL-G---TGPKVNVLKQLQ 205 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~------------~~~~iL~~~~gl~~~f~~v~g~-~---~~pkp~~l~~~l 205 (274)
.+||||.++|+ ++|++++|+|||+.. .++.+|++ +|+.. +.+++. + .||+|+++.+++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHH
Confidence 48999999999 799999999999974 57889995 99954 445543 3 369999999999
Q ss_pred hhCC--CCCCcEEEEcCCh--------hHHHHhhccCccCCCcEEE
Q 024003 206 KKPE--HQGLRLHFVEDRL--------ATLKNVIKEPELDGWNLYL 241 (274)
Q Consensus 206 ~~l~--~~~~~~l~VGDs~--------~Di~aA~~~~~~Agv~~i~ 241 (274)
++++ +++++++||||+. +|+++|++ ||++++.
T Consensus 119 ~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~----aGi~~~~ 160 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN----LGLEFKY 160 (166)
T ss_pred HHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH----CCCCcCC
Confidence 9999 9999999999996 69999998 8988753
No 59
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.73 E-value=6.1e-17 Score=136.90 Aligned_cols=83 Identities=13% Similarity=0.225 Sum_probs=73.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-----------------------C-C
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----------------------G-P 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-----------------------~-p 196 (274)
.+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.|++.+. + +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 589999999999 78999999999999999999995 999999999997421 1 6
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 197 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 197 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
|++++.+++++. +++++||||+.+|+.+|++
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~ 180 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKL 180 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchHhc
Confidence 888888887754 7899999999999999997
No 60
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.73 E-value=9.7e-18 Score=140.95 Aligned_cols=99 Identities=21% Similarity=0.181 Sum_probs=86.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHHhCCCCCCceE-ec----CC----CC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YG----LG----TG 195 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK---------------~~~~~~~iL~~~~gl~~~f~~v-~g----~~----~~ 195 (274)
..++||||.++|+ ++|++++|+||| +...+..+|++ +|+. |+.+ +| ++ .|
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCCC
Confidence 3589999999999 789999999998 46788999996 9997 6644 55 23 36
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
|+|+++..++++++++|++++||||+.+|+++|++ +|+++++|++|--.
T Consensus 104 P~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~----aGi~~i~~~~~~~~ 152 (161)
T TIGR01261 104 PKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN----LGIRGIQYDEEELN 152 (161)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH----CCCeEEEEChhhcC
Confidence 99999999999999999999999999999999998 99999999998644
No 61
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.72 E-value=2.8e-16 Score=138.07 Aligned_cols=198 Identities=13% Similarity=0.074 Sum_probs=139.3
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhccc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMRL 82 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~~ 82 (274)
.+++||+||||+||-..++.+.+.-+..+. .+. + ... -....|.+..... +.+....
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~yg------k~~-~-------~~~------~~~~mG~~~~eaa--~~~~~~~- 67 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEAWQELLDRYG------KPY-P-------WDV------KVKSMGKRTSEAA--RLFVKKL- 67 (222)
T ss_pred eeEEEecCCcEEecHHHHHHHHHHHHHHcC------CCC-h-------HHH------HHHHcCCCHHHHH--HHHHhhc-
Confidence 478999999999999999999999999993 211 1 112 2336677666543 3332100
Q ss_pred ccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCC
Q 024003 83 PSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASS 159 (274)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~ 159 (274)
.+.. +.+++.......... ......+.||+..++. ..|+
T Consensus 68 --------~dp~----------------------s~ee~~~e~~~~~~~--------~~~~~~~~PGa~kLv~~L~~~gi 109 (222)
T KOG2914|consen 68 --------PDPV----------------------SREEFNKEEEEILDR--------LFMNSILMPGAEKLVNHLKNNGI 109 (222)
T ss_pred --------CCCC----------------------CHHHHHHHHHHHHHH--------hccccccCCcHHHHHHHHHhCCC
Confidence 0011 222222222222222 2345789999999999 7999
Q ss_pred cEEEEcCCchHHHHHHHHHHhC-CCCCCceEec-CC-----CCCcHHHHHHHHhhCCCCC-CcEEEEcCChhHHHHhhcc
Q 024003 160 RIYIVTSNQSRFVETLLRELAG-VTITPDRLYG-LG-----TGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~g-l~~~f~~v~g-~~-----~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~aA~~~ 231 (274)
+++++||.++...+.-+.+ ++ +-..|..++. .+ .||+|++++.+.+.+|..| +.|+.++|++.-+++|++
T Consensus 110 p~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~a- 187 (222)
T KOG2914|consen 110 PVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKA- 187 (222)
T ss_pred CeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHh-
Confidence 9999999999999999886 55 6666766554 32 2499999999999999998 999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
|||++|+|.- +.- ..+.. ..+.+.+.+.+++.
T Consensus 188 ---agm~vi~v~~-~~~-~~~~~--~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 188 ---AGMQVVGVAT-PDL-SNLFS--AGATLILESLEDFK 219 (222)
T ss_pred ---cCCeEEEecC-CCc-chhhh--hccceecccccccC
Confidence 9999999987 222 22222 23458888877765
No 62
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.71 E-value=9.1e-17 Score=141.52 Aligned_cols=111 Identities=16% Similarity=0.167 Sum_probs=91.3
Q ss_pred HHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHh---CCCCCCceEecC--CCCCcHHHHHH
Q 024003 132 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGL--GTGPKVNVLKQ 203 (274)
Q Consensus 132 ~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~---gl~~~f~~v~g~--~~~pkp~~l~~ 203 (274)
|.+.|..+ ...+.+||||.++|+ ++|++++|+||++....+.++++ + ++..+|+.++.. ..||+|+++.+
T Consensus 83 w~~~Y~~~-~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~ 160 (220)
T TIGR01691 83 WRQGYESG-ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVK 160 (220)
T ss_pred HHHHHhcC-CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHH
Confidence 33344443 445789999999999 78999999999999999998884 5 455555544321 14799999999
Q ss_pred HHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 204 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 204 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
+++++|++|++++||||+..|+++|++ |||++++|.|+.+.
T Consensus 161 i~~~lgv~p~e~lfVgDs~~Di~AA~~----AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 161 IAGQLGSPPREILFLSDIINELDAARK----AGLHTGQLVRPGND 201 (220)
T ss_pred HHHHhCcChhHEEEEeCCHHHHHHHHH----cCCEEEEEECCCCC
Confidence 999999999999999999999999998 99999999998643
No 63
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.70 E-value=1.6e-16 Score=148.68 Aligned_cols=94 Identities=16% Similarity=0.167 Sum_probs=81.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHHhCCCCCCceE-ecC----C----CCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGL----G----TGP 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK---------------~~~~~~~iL~~~~gl~~~f~~v-~g~----~----~~p 196 (274)
.++||||.++|+ ++|++++|+||| +...+..++++ +|+. |+.+ ++. + .||
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~~rKP 105 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCSCRKP 105 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCCCCCC
Confidence 689999999999 789999999997 46778889996 8884 6654 442 2 369
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeC
Q 024003 197 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 197 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~w 244 (274)
+|+++.+++++++++|++++||||+.+|+++|++ +||++|+|.-
T Consensus 106 ~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~----aGi~~I~v~~ 149 (354)
T PRK05446 106 KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAEN----MGIKGIRYAR 149 (354)
T ss_pred CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHH----CCCeEEEEEC
Confidence 9999999999999999999999999999999998 9999999943
No 64
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.69 E-value=8.7e-17 Score=136.08 Aligned_cols=100 Identities=18% Similarity=0.258 Sum_probs=87.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~-~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
..+|||+.++|+ ++|++++|+||++ ...++.+++. +|+..++ ...||+|+++..++++++++|++++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 479999999999 7899999999999 7888888885 8875332 2358999999999999999999999999
Q ss_pred CCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHH
Q 024003 220 DRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERA 253 (274)
Q Consensus 220 Ds~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~ 253 (274)
|+. .|+++|++ +|+.+|+|.||+++.+.+.
T Consensus 116 Ds~~~Di~aA~~----aGi~~i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 116 DRLFTDVMGGNR----NGSYTILVEPLVHPDQWFI 146 (170)
T ss_pred CcchHHHHHHHH----cCCeEEEEccCcCCccccc
Confidence 998 69999998 9999999999998876553
No 65
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.69 E-value=7.3e-17 Score=147.35 Aligned_cols=97 Identities=21% Similarity=0.107 Sum_probs=90.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC-CCceEecCC----------C-CCcHHHHHHHHhhC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLG----------T-GPKVNVLKQLQKKP 208 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~-~f~~v~g~~----------~-~pkp~~l~~~l~~l 208 (274)
..+|||+.++|+ ++|++++|+|||+...++.+++. +++.. +|+.++|.+ . ||+|++++++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 579999999999 78999999999999999999995 99986 999999975 2 59999999999999
Q ss_pred CC-CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 209 EH-QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 209 ~~-~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
+. .+++|+||||+.+|+++|++ |||++|+|+||
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a~~----~Gi~~i~v~~g 298 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMWRR----IGLECWQVAPG 298 (300)
T ss_pred hccCceEEEEEcCcHHHHHHHHH----hCCeEEEecCC
Confidence 88 57999999999999999998 99999999999
No 66
>PRK11590 hypothetical protein; Provisional
Probab=99.68 E-value=1.7e-15 Score=132.28 Aligned_cols=171 Identities=13% Similarity=0.070 Sum_probs=108.8
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHH-HHhCCCCCCCCCchhhhHHHhhhhhhhcccccccccccchHHHHHHHHHHhcc
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAA-RVRWPSLFDGVDSALEDWIVDQMHTCFILLQLRPVVETGYDTLLLVRLLLEMR 81 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~-~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~vr~~ig~G~~~l~~~~~l~~~~ 81 (274)
|+++|||||||+ .+++..+++..+ +++ |++.. .... ++.++|.|.......+.+
T Consensus 7 k~~iFD~DGTL~--~~d~~~~~~~~~~~~~------g~~~~-------~~~~------~~~~ig~~l~~~~~~~~~---- 61 (211)
T PRK11590 7 RVVFFDLDGTLH--QQDMFGSFLRYLLRRQ------PLNLL-------LVLP------LLPVIGLGLLVKGRAARW---- 61 (211)
T ss_pred eEEEEecCCCCc--ccchHHHHHHHHHHhc------chhhH-------HHhH------HHHHhccCcccchhhhhh----
Confidence 799999999999 667889998888 666 33322 1234 677888877543211000
Q ss_pred cccccccccccccchHHHHHhhhhhhhHHHhhhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHH-H---hC
Q 024003 82 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDAL-K---LA 157 (274)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L-~---~~ 157 (274)
+ ...+ .-.+ ..|.+++++++..+.|++.|.+. ..+|||+.++| + ++
T Consensus 62 -----------~--~~~~-------~~~~--~~g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~ 111 (211)
T PRK11590 62 -----------P--MSLL-------LWGC--TFGHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSS 111 (211)
T ss_pred -----------h--HHHH-------HHHH--HcCCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhC
Confidence 0 0000 0000 01345555555556555555322 57899999999 4 47
Q ss_pred CCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-----C----C---CcHHHHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 158 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----T----G---PKVNVLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 158 g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-----~----~---pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
|++++|||||++..++.+++. +|+.. .+.++|.+ + + -..+-+..+.+.++.+...+.+-|||.+|+
T Consensus 112 G~~l~IvSas~~~~~~~il~~-l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~ 189 (211)
T PRK11590 112 DADVWLITGSPQPLVEQVYFD-TPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDN 189 (211)
T ss_pred CCEEEEEeCCcHHHHHHHHHH-ccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccH
Confidence 999999999999999999996 88632 33445533 1 1 122333334344455667788999999999
Q ss_pred HHhhc
Q 024003 226 KNVIK 230 (274)
Q Consensus 226 ~aA~~ 230 (274)
-.-.-
T Consensus 190 pmL~~ 194 (211)
T PRK11590 190 PLLYF 194 (211)
T ss_pred HHHHh
Confidence 98875
No 67
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.67 E-value=2.9e-17 Score=149.18 Aligned_cols=120 Identities=17% Similarity=0.146 Sum_probs=97.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHH-HHHHHHhCCCCCCceEe---cCC----CCCcHHHHHHHHhhCCCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~-~iL~~~~gl~~~f~~v~---g~~----~~pkp~~l~~~l~~l~~~~ 212 (274)
.--|||+.++|+ ++|+ ++|+|||+..... ..+.. .|+..+|+.+. |.+ .||+|+++.+++++++++|
T Consensus 142 ~~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~ 219 (279)
T TIGR01452 142 HFSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDP 219 (279)
T ss_pred CCCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCCh
Confidence 346999999998 4676 8999999986542 23342 56666666654 333 2699999999999999999
Q ss_pred CcEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc------CCCCCceeechhHH
Q 024003 213 LRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA------ASMPRIQLLQLSDF 269 (274)
Q Consensus 213 ~~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a------~~~P~~~~~~~~~~ 269 (274)
++++||||+ .+||++|++ ||+++|+|+||+++.+++.++ ...|++++.|+.+|
T Consensus 220 ~~~lmIGD~~~tDI~~A~~----aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 220 ARTLMVGDRLETDILFGHR----CGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hhEEEECCChHHHHHHHHH----cCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 999999999 599999998 999999999999999888753 35799999998875
No 68
>PRK10444 UMP phosphatase; Provisional
Probab=99.66 E-value=1.3e-16 Score=143.06 Aligned_cols=71 Identities=17% Similarity=0.167 Sum_probs=67.1
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||+|+++..+++++++++++++||||+. +||++|++ +|+++++|.||+++.++++.....|++++.|+.+|
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~----~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQ----AGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHH----cCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 6999999999999999999999999996 89999998 99999999999999998887778899999999987
No 69
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.66 E-value=4.2e-15 Score=137.92 Aligned_cols=101 Identities=15% Similarity=0.184 Sum_probs=82.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc----e--------EecC--CCCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R--------LYGL--GTGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~----~--------v~g~--~~~pkp~~l~~~l~ 206 (274)
.+++||+.++|+ ++|++++|+||....+++.++++ +|++..+. . +.|. +.+||++.+.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 679999999999 79999999999999999999996 99875332 1 1111 13599999999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
++|+++++|++|||+.+|+.++++ ||+. |.| +....+++
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~----AGlg---iA~--nAkp~Vk~ 297 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKA----AGLG---IAY--HAKPKVNE 297 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHH----CCCe---EEe--CCCHHHHh
Confidence 999999999999999999999997 7864 445 44455543
No 70
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.64 E-value=1.4e-14 Score=126.17 Aligned_cols=89 Identities=11% Similarity=0.038 Sum_probs=67.4
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc--eEe-------cCC--CCCcHHHHHHHHhhCCC
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-------GLG--TGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~--~v~-------g~~--~~pkp~~l~~~l~~l~~ 210 (274)
.++|||+.++|+ +++++++||||+...++++++++ +|++.+|. ..+ |.. .++++..+...+++.+.
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~ 145 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 145 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCC
Confidence 579999999999 44469999999999999999996 99998875 222 211 23444444444455553
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEE
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i 240 (274)
+++||||+.+|+.++++ ||++++
T Consensus 146 ---~~v~vGDs~nDl~ml~~----Ag~~ia 168 (203)
T TIGR02137 146 ---RVIAAGDSYNDTTMLSE----AHAGIL 168 (203)
T ss_pred ---CEEEEeCCHHHHHHHHh----CCCCEE
Confidence 79999999999999997 776643
No 71
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.64 E-value=1.4e-15 Score=132.79 Aligned_cols=121 Identities=12% Similarity=0.112 Sum_probs=86.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC---ceEecCC----CCCcHHHH----------HH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DRLYGLG----TGPKVNVL----------KQ 203 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f---~~v~g~~----~~pkp~~l----------~~ 203 (274)
.+++||+.++|+ ++|++++|+||+...+++.+|+. ++...++ +.+++++ .+|+|++. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 689999999999 78999999999999999999996 6544343 2344433 23766654 35
Q ss_pred HHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhcC
Q 024003 204 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKLK 274 (274)
Q Consensus 204 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~~ 274 (274)
++++++..+++++||||+.+|+.+|++ ||+ +.+ -++. .+..+. ...|...+.+..|+.+.|+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~----Ad~--~~a-r~~l-~~~~~~-~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQ----SDL--CFA-RDYL-LNECEE-LGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHh----CCe--eEe-hHHH-HHHHHH-cCCCccCcCCHHHHHHHHH
Confidence 677777788899999999999999997 776 222 2221 111222 2336677888888877663
No 72
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.61 E-value=2e-14 Score=123.56 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=87.8
Q ss_pred ccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCce-Ee
Q 024003 115 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR-LY 190 (274)
Q Consensus 115 ~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~-v~ 190 (274)
|++.+++.....++.+.+. ...+|||+.++|+ ++|++++|+||+++..++.++++ +|++.+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceE
Confidence 6676666555554444322 2479999999998 78999999999999999999995 999877654 22
Q ss_pred c-CC-------C------CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEE
Q 024003 191 G-LG-------T------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 191 g-~~-------~------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i 240 (274)
. .+ . ++|+..+.+++++.+++++++++||||.+|+.+++. +|.+++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~----a~~~~~ 195 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSL----VGHPYV 195 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHh----CCCcEE
Confidence 1 11 0 157778999999999999999999999999999997 777753
No 73
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.60 E-value=9e-16 Score=137.43 Aligned_cols=120 Identities=16% Similarity=0.197 Sum_probs=90.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHH--HH-HHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCc
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVET--LL-RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~--iL-~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~ 214 (274)
...|+.+...+. ++|.+ .|+||....+-.. ++ .. -.+...++.+.|.+ .||+|+++..+++++++++++
T Consensus 120 ~~~y~~l~~a~~~l~~g~~-~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 120 QIDYEKFATATLAIRKGAH-FIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CCCHHHHHHHHHHHHCCCe-EEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence 456777776666 67877 8889976543211 00 10 01111233344443 269999999999999999999
Q ss_pred EEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 215 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 215 ~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
++||||+. +||.+|++ +|+++++|.||++..+++......|++++.++.+|
T Consensus 198 ~~~VGD~~~~Di~~a~~----~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGID----AGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEEECCCchhhHHHHHH----cCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99999996 89999998 89999999999999888877777899999998875
No 74
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.57 E-value=3.7e-15 Score=120.47 Aligned_cols=85 Identities=19% Similarity=0.070 Sum_probs=79.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHHhC-------CCCCCceEecCCCCCcHHHHHHHHhhCC--CC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVLKQLQKKPE--HQ 211 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK-~~~~~~~iL~~~~g-------l~~~f~~v~g~~~~pkp~~l~~~l~~l~--~~ 211 (274)
++|||+.++|+ ++|++++|+||+ +...+..+++. ++ +..+|+.+++++.+|||+++.++++++| +.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 69999999999 789999999999 99999999995 88 8899999999877899999999999999 99
Q ss_pred CCcEEEEcCChhHHHHhhc
Q 024003 212 GLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~ 230 (274)
|++|+||||+..|+++.++
T Consensus 108 p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 108 PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cceEEEECCCHhHHHHHHh
Confidence 9999999999999987763
No 75
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.56 E-value=4e-14 Score=125.22 Aligned_cols=95 Identities=18% Similarity=0.230 Sum_probs=84.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
..+..+|+.++|+ ++|..++|+||=..+.= .++.. +|+..|||.|+-+. .||+|.+...+++++++.|++|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 3567789999998 79999999999988765 77775 99999999999653 4699999999999999999999
Q ss_pred EEEcCCh-hHHHHhhccCccCCCcEEEEe
Q 024003 216 HFVEDRL-ATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 216 l~VGDs~-~Di~aA~~~~~~Agv~~i~v~ 243 (274)
++|||+. +|+++|++ +|+.++.|.
T Consensus 189 vhIgD~l~nD~~gA~~----~G~~ailv~ 213 (237)
T KOG3085|consen 189 VHIGDLLENDYEGARN----LGWHAILVD 213 (237)
T ss_pred EEecCccccccHhHHH----cCCEEEEEc
Confidence 9999986 67999998 899999997
No 76
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.56 E-value=3e-14 Score=122.44 Aligned_cols=84 Identities=17% Similarity=0.273 Sum_probs=74.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC--CCcHHHHHHHHhhCCCCCCcEEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~--~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+++||+.++|+ ++|++++|+|+-....+..+.+. +||. +.++-++. +|.|.++.+++++++.++++++|
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~---~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIF---DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSC---SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccc-cccc---cccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 3589999999999 79999999999999999999996 9994 33333344 79999999999999999999999
Q ss_pred EcCChhHHHHhhc
Q 024003 218 VEDRLATLKNVIK 230 (274)
Q Consensus 218 VGDs~~Di~aA~~ 230 (274)
|||+.||+.++++
T Consensus 201 vGDg~nD~~al~~ 213 (215)
T PF00702_consen 201 VGDGVNDAPALKA 213 (215)
T ss_dssp EESSGGHHHHHHH
T ss_pred EccCHHHHHHHHh
Confidence 9999999999997
No 77
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.54 E-value=4.4e-14 Score=118.56 Aligned_cols=86 Identities=20% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecC--------------CC--CCcHHHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL--------------GT--GPKVNVLKQL 204 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~--------------~~--~pkp~~l~~~ 204 (274)
..++||+.++|+ ++|++++|+|+....+++.++++ +|+..+|...+.. .. ..|+..+.++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 568999999999 79999999999999999999996 9998766433221 01 1577899999
Q ss_pred HhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 205 QKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 205 l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
++++++++++++|||||.+|+.+++.
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~ 176 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKL 176 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhc
Confidence 99999999999999999999999874
No 78
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.54 E-value=7e-15 Score=121.67 Aligned_cols=91 Identities=11% Similarity=-0.030 Sum_probs=78.9
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCC-CCceEecCCC--CCcHHHHHHHHhhCCCCCCcEEE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~-~f~~v~g~~~--~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
...+|||+.|+|+ .++++++|+||++...++.+|++ +++.. +|+.|++++. ..||. +.++++++|.+|++|+|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 3689999999999 77899999999999999999996 99965 5699998763 25555 88899999999999999
Q ss_pred EcCChhHHHHhhccCccCCCcE
Q 024003 218 VEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 218 VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
|||+.+|+++|++ +||++
T Consensus 121 i~Ds~~~~~aa~~----ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFHPE----NLIPI 138 (148)
T ss_pred EECCHHHhhcCcc----CEEEe
Confidence 9999999999987 66654
No 79
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.53 E-value=1.4e-14 Score=106.31 Aligned_cols=71 Identities=21% Similarity=0.230 Sum_probs=67.3
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCC-hhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs-~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||+|.++..+++++++++++++||||+ ..||++|++ +|+.+|+|.+|+.+.+++......|++++.++.|+
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~----~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKA----AGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHH----TTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHH----cCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 799999999999999999999999999 999999998 99999999999999988887778999999999875
No 80
>PLN02645 phosphoglycolate phosphatase
Probab=99.50 E-value=1.3e-14 Score=133.94 Aligned_cols=111 Identities=19% Similarity=0.186 Sum_probs=92.4
Q ss_pred CCcEEEEcCCchHH-HHHHHHHHhCCCCCCceEecCC---C----CCcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHHh
Q 024003 158 SSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLG---T----GPKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNV 228 (274)
Q Consensus 158 g~~laIvTnK~~~~-~~~iL~~~~gl~~~f~~v~g~~---~----~pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA 228 (274)
+-.++|+|||+... ....+. ++|+..+|+.+.+.. . ||+|.++..+++++++++++++||||+. +||.+|
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~-~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQE-WAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCC-ccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 34699999999865 344445 377777888887643 1 6999999999999999999999999997 999999
Q ss_pred hccCccCCCcEEEEeCCCCChHHHHhc--CCCCCceeechhHHHhhc
Q 024003 229 IKEPELDGWNLYLVDWGYNTPKERAEA--ASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 229 ~~~~~~Agv~~i~v~wGy~~~~~l~~a--~~~P~~~~~~~~~~~~~~ 273 (274)
++ +|+++|+|.||+++.+++... ...|++++.++.+|...+
T Consensus 265 ~~----aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~ 307 (311)
T PLN02645 265 QN----GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLK 307 (311)
T ss_pred HH----cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHh
Confidence 98 999999999999998887653 357999999999997654
No 81
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.47 E-value=1e-13 Score=115.49 Aligned_cols=101 Identities=13% Similarity=0.055 Sum_probs=84.1
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.+.|+++|++++|+|||+...++.++++ +|+..+|+. .+|||+++.++++++++++++|+||||+.+|+.+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~ 109 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVME 109 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 55666689999999999999999999996 999877653 269999999999999999999999999999999999
Q ss_pred ccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 230 KEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
+ +|++ ++|.++. +.+.. .|++++.++.
T Consensus 110 ~----ag~~-~~v~~~~---~~~~~---~a~~i~~~~~ 136 (154)
T TIGR01670 110 K----VGLS-VAVADAH---PLLIP---RADYVTRIAG 136 (154)
T ss_pred H----CCCe-EecCCcC---HHHHH---hCCEEecCCC
Confidence 8 8886 7777775 23332 3567777764
No 82
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.46 E-value=1.9e-13 Score=133.86 Aligned_cols=83 Identities=20% Similarity=0.312 Sum_probs=73.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHHH
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQ 205 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~------------~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~l 205 (274)
-+||||.+.|+ ++|++++|+||++. ..+..+|++ +|+. |+.++|.+ .||+|.++.+++
T Consensus 197 ~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~ 273 (526)
T TIGR01663 197 IIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLK 273 (526)
T ss_pred ecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHH
Confidence 37999999999 89999999999998 568899996 8884 88888764 369999999999
Q ss_pred hhCC----CCCCcEEEEcCChhHHHHhhc
Q 024003 206 KKPE----HQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 206 ~~l~----~~~~~~l~VGDs~~Di~aA~~ 230 (274)
++++ +++++++||||+..|+++|++
T Consensus 274 ~~~~~~~~Id~~~S~~VGDaagr~~~g~~ 302 (526)
T TIGR01663 274 EEANDGTEIQEDDCFFVGDAAGRPANGKA 302 (526)
T ss_pred HhcCcccCCCHHHeEEeCCcccchHHHHh
Confidence 9984 899999999999999998876
No 83
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.42 E-value=8.6e-13 Score=112.92 Aligned_cols=104 Identities=17% Similarity=0.204 Sum_probs=83.6
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 152 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 152 e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
+.|.++|++++|+||++...++.++++ +|+..+|+ |. ++|++.+.++++++|+++++++||||+.+|+.++++
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g~--~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~- 130 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---GQ--SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK- 130 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---CC--CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH-
Confidence 334479999999999999999999996 99987776 33 478999999999999999999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhcCCCCCceee------chhHHHhh
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEAASMPRIQLL------QLSDFCTK 272 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~------~~~~~~~~ 272 (274)
+|++ ++|. +..++.... |++++. .+.+|...
T Consensus 131 ---aG~~-~~v~----~~~~~~~~~--a~~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 131 ---VGLS-VAVA----DAHPLLLPR--ADYVTRIAGGRGAVREVCDL 167 (183)
T ss_pred ---CCCe-EecC----ChhHHHHHh--CCEEecCCCCCCHHHHHHHH
Confidence 8988 4453 334444443 458876 57777653
No 84
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.41 E-value=4.1e-13 Score=113.74 Aligned_cols=90 Identities=21% Similarity=0.241 Sum_probs=74.9
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 152 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 152 e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
..|+++|++++|+|||++..++.++++ +|+..+|+.+ +|||+++..+++++++++++++||||+.+|+.++++
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~- 116 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR- 116 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH-
Confidence 445579999999999999999999996 9999888743 699999999999999999999999999999999998
Q ss_pred CccCCCcEEEEeCCCCChHHHHhc
Q 024003 232 PELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
+|+.++ + + +..++++++
T Consensus 117 ---ag~~~a-m--~-nA~~~lk~~ 133 (169)
T TIGR02726 117 ---VGLAVA-V--G-DAVADVKEA 133 (169)
T ss_pred ---CCCeEE-C--c-CchHHHHHh
Confidence 665543 2 2 334555544
No 85
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.41 E-value=1.2e-12 Score=117.37 Aligned_cols=107 Identities=11% Similarity=0.068 Sum_probs=76.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCc-----hHHHHHHHHHHhCCCC------CCceEecCCCCCcHHHHHHHHhhCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQ-----SRFVETLLRELAGVTI------TPDRLYGLGTGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~-----~~~~~~iL~~~~gl~~------~f~~v~g~~~~pkp~~l~~~l~~l~~ 210 (274)
..|+++.++++ ..+..+.|+|+++ +...+.+++. +++.. +++.+..+ ..|+..+..+++++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~--~~K~~~l~~l~~~~gi 213 (272)
T PRK10530 137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKG--NSKGKRLTQWVEAQGW 213 (272)
T ss_pred cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCC--CChHHHHHHHHHHcCC
Confidence 35788887776 4567778888865 4556666664 66542 12222111 2689999999999999
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
+++++++|||+.||+.+++. ||+ +|.||.. .+++++. + +++..+
T Consensus 214 ~~~e~i~~GD~~NDi~m~~~----ag~---~vamgna-~~~lk~~-A--d~v~~~ 257 (272)
T PRK10530 214 SMKNVVAFGDNFNDISMLEA----AGL---GVAMGNA-DDAVKAR-A--DLVIGD 257 (272)
T ss_pred CHHHeEEeCCChhhHHHHHh----cCc---eEEecCc-hHHHHHh-C--CEEEec
Confidence 99999999999999999997 774 7888964 4566532 3 466654
No 86
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.40 E-value=9.2e-12 Score=109.19 Aligned_cols=86 Identities=16% Similarity=0.152 Sum_probs=73.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe-------cCC-------CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY-------GLG-------TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~-------g~~-------~~pkp~~l~~~l~ 206 (274)
.+++||..++++ ++|++++|+|.-+..+++++.+. +|++..+.... ++. ..-|-+.+.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 689999999999 89999999999999999999996 99986554333 221 1157789999999
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhc
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
++|++++++++||||.||+-+=+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ 178 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEA 178 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHh
Confidence 999999999999999999999886
No 87
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.37 E-value=3.2e-12 Score=100.66 Aligned_cols=95 Identities=25% Similarity=0.218 Sum_probs=85.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----C----------------CCcHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----T----------------GPKVN 199 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~----------------~pkp~ 199 (274)
..+++||+.++|+ ++|++++|+||.....++..++. +|+..+|+.+++.+ . +|+++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 3689999999999 78999999999999999999996 99988888888753 2 68999
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
.+..++++++..+++++||||+.+|+.++++ +|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~----~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKA----AGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHH----cCCceeeC
Confidence 9999999999999999999999999999997 79998875
No 88
>PRK08238 hypothetical protein; Validated
Probab=99.35 E-value=1.6e-11 Score=119.50 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=79.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC----CC--cHHHHHHHHhhCCCCCCcE
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----GP--KVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~----~p--kp~~l~~~l~~l~~~~~~~ 215 (274)
+++||+.|.|+ ++|++++|+||+++..++.++++ +|+ |+.++|.+. +| |++.+. +.++ .+++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~---~~l~--~~~~ 142 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALV---EAFG--ERGF 142 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHH---HHhC--ccCe
Confidence 57799999999 79999999999999999999995 887 899998762 23 444443 4444 3568
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechh
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 267 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~ 267 (274)
+|||||.+|+.+++. || ..+.|.=+-+-.. ..+....|..++.+..
T Consensus 143 ~yvGDS~~Dlp~~~~----A~-~av~Vn~~~~l~~-~a~~~~~~~~~~~~~~ 188 (479)
T PRK08238 143 DYAGNSAADLPVWAA----AR-RAIVVGASPGVAR-AARALGPVERVFPPRP 188 (479)
T ss_pred eEecCCHHHHHHHHh----CC-CeEEECCCHHHHH-HHHHcCCcceecCCCc
Confidence 999999999999997 66 6677865543222 2233334555554433
No 89
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.35 E-value=2.3e-12 Score=119.50 Aligned_cols=86 Identities=17% Similarity=0.116 Sum_probs=79.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHH----hCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLREL----AGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~----~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
...+|||+.++|+ ++|++++|||||++..+..+|+ + +++..+|+.+.+. .+|||+.+.++++++++.++++
T Consensus 29 ~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~-~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~ 106 (320)
T TIGR01686 29 LSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE-RRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSF 106 (320)
T ss_pred cCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-hCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcE
Confidence 3568999999999 7999999999999999999999 6 7888899998775 4699999999999999999999
Q ss_pred EEEcCChhHHHHhhc
Q 024003 216 HFVEDRLATLKNVIK 230 (274)
Q Consensus 216 l~VGDs~~Di~aA~~ 230 (274)
+||||+..|+.++++
T Consensus 107 vfidD~~~d~~~~~~ 121 (320)
T TIGR01686 107 LFIDDNPAERANVKI 121 (320)
T ss_pred EEECCCHHHHHHHHH
Confidence 999999999999997
No 90
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.34 E-value=5.5e-11 Score=104.05 Aligned_cols=106 Identities=14% Similarity=0.122 Sum_probs=72.1
Q ss_pred ccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHH----hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEe
Q 024003 115 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 190 (274)
Q Consensus 115 ~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~----~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~ 190 (274)
|.+.+++++..+.|++.|.+ .+.+|||+.++|+ ++|++++|||||++..++.+.+. .++..- +.++
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~-~~~i 141 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHR-LNLI 141 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-cccccc-CcEE
Confidence 55667766666666666543 2478999999994 47999999999999999999985 665332 3344
Q ss_pred cCC----C-----C---CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 191 GLG----T-----G---PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 191 g~~----~-----~---pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
|.+ . + --++-+..+.+.++.+...+.+-|||.+|+..-.-
T Consensus 142 ~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~ 193 (210)
T TIGR01545 142 ASQIERGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAF 193 (210)
T ss_pred EEEeEEeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHh
Confidence 432 1 1 11233333333334455677899999999998775
No 91
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.27 E-value=1.7e-12 Score=115.52 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=79.7
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceE--ecCC----CCCcHHHHHHHHhhCCCC-CCcE
Q 024003 146 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL--YGLG----TGPKVNVLKQLQKKPEHQ-GLRL 215 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v--~g~~----~~pkp~~l~~~l~~l~~~-~~~~ 215 (274)
-|||+.++|+ ++|+++ |+|||+.......+.. +|...+|..+ +|.+ .||+|+++..++++++.. ++++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3899999998 689997 9999999999888884 8888777765 5654 269999999999999875 5789
Q ss_pred EEEcCC-hhHHHHhhccCccCCCcEEEEe
Q 024003 216 HFVEDR-LATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 216 l~VGDs-~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
+||||+ .+||.+|++ +|+++++|+
T Consensus 217 ~~vGD~~~~Di~~a~~----~G~~~i~v~ 241 (242)
T TIGR01459 217 LMVGDSFYTDILGANR----LGIDTALVL 241 (242)
T ss_pred EEECCCcHHHHHHHHH----CCCeEEEEe
Confidence 999999 699999998 999999986
No 92
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.22 E-value=3.4e-11 Score=118.98 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=88.8
Q ss_pred cCCCCCCCccHHHHHH---hCCC-cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 140 WIGANRLYPGVSDALK---LASS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 140 ~~~~~~lypGv~e~L~---~~g~-~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
.....++|||+.++|+ ++|+ +++|+||+++..++.++++ +|++.+|..+. ..+|++.+.++ +..++++
T Consensus 357 i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l----~~~~~~v 428 (536)
T TIGR01512 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKEL----REKYGPV 428 (536)
T ss_pred EEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHH----HhcCCEE
Confidence 3445789999999999 7999 9999999999999999996 99988876443 22455555544 4455799
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCcee--echhHHHhhc
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCTKL 273 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~--~~~~~~~~~~ 273 (274)
+||||+.+|+.++++ || ++++|||...+ ..... +++++ +++.++...+
T Consensus 429 ~~vGDg~nD~~al~~----A~---vgia~g~~~~~-~~~~~--ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 429 AMVGDGINDAPALAA----AD---VGIAMGASGSD-VAIET--ADVVLLNDDLSRLPQAI 478 (536)
T ss_pred EEEeCCHHHHHHHHh----CC---EEEEeCCCccH-HHHHh--CCEEEECCCHHHHHHHH
Confidence 999999999999998 77 59999974332 33333 34777 7888886543
No 93
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.22 E-value=3.3e-11 Score=119.53 Aligned_cols=113 Identities=22% Similarity=0.286 Sum_probs=87.0
Q ss_pred CCCCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEE
Q 024003 141 IGANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g-~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
....++|||+.++|+ ++| ++++|+||+++..++.++++ +|++.+|..+.. .+|++.+.++. ..+++++
T Consensus 380 ~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~~p---~~K~~~v~~l~----~~~~~v~ 451 (556)
T TIGR01525 380 ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAELLP---EDKLAIVKELQ----EEGGVVA 451 (556)
T ss_pred EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccCCH---HHHHHHHHHHH----HcCCEEE
Confidence 345789999999999 789 99999999999999999996 999887765421 25666555544 3567999
Q ss_pred EEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHHhh
Q 024003 217 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCTK 272 (274)
Q Consensus 217 ~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~~~ 272 (274)
||||+.+|+.++++ || ++|+||.++ +..... +++++. ++..+...
T Consensus 452 ~vGDg~nD~~al~~----A~---vgia~g~~~--~~~~~~--Ad~vi~~~~~~~l~~~ 498 (556)
T TIGR01525 452 MVGDGINDAPALAA----AD---VGIAMGAGS--DVAIEA--ADIVLLNDDLSSLPTA 498 (556)
T ss_pred EEECChhHHHHHhh----CC---EeEEeCCCC--HHHHHh--CCEEEeCCCHHHHHHH
Confidence 99999999999997 77 899999533 333333 458777 56666543
No 94
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.21 E-value=4.7e-10 Score=99.65 Aligned_cols=108 Identities=18% Similarity=0.239 Sum_probs=86.1
Q ss_pred CCCCCccHHHHHH-----hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-----C--------------C---
Q 024003 143 ANRLYPGVSDALK-----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----T--------------G--- 195 (274)
Q Consensus 143 ~~~lypGv~e~L~-----~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-----~--------------~--- 195 (274)
..++-||+.++++ +.|+.+.|+|.-..-+.+.+|++ .|+...|+.|+... . .
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 4688999999999 36999999999999999999995 99999998888742 1 0
Q ss_pred --CcHHHHHHHHhhC---CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 196 --PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 196 --pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
-|-.++.+.++.. |+.-.+++||||+.+|+-.+.+ ...-.++.+.=||.-.+-+.+
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~---L~~~D~v~~R~~~~l~~~i~~ 208 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR---LRPRDVVFPRKGYPLHKLIQK 208 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc---cCCCCEEecCCCChHHHHHhc
Confidence 2456777777663 6677899999999999999876 244567889999865554544
No 95
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.16 E-value=9.3e-10 Score=95.51 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=81.5
Q ss_pred CCCCccHHHHHHh-CCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC----------CCcHHHHHHHHhhCCCC-
Q 024003 144 NRLYPGVSDALKL-ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----------GPKVNVLKQLQKKPEHQ- 211 (274)
Q Consensus 144 ~~lypGv~e~L~~-~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~----------~pkp~~l~~~l~~l~~~- 211 (274)
.+|=|-.+++|-+ +..+..|.||-+..-|.++|+. +||.+.|+.|++-+. ||.++.+..+++..|+.
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 4555556777772 2222899999999999999996 999999999997541 49999999999999998
Q ss_pred CCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 212 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 212 ~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
|.+++|+.||.+.|++|++ -|+.++.|+=-
T Consensus 178 p~~t~FfDDS~~NI~~ak~----vGl~tvlv~~~ 207 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTAKE----VGLKTVLVGRE 207 (244)
T ss_pred cCceEEEcCchhhHHHHHh----ccceeEEEEee
Confidence 9999999999999999998 78888887543
No 96
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.15 E-value=2.1e-10 Score=107.13 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=82.1
Q ss_pred CCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhC-------CCCCCceEecCCCCC--------------
Q 024003 141 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTGP-------------- 196 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~g-------l~~~f~~v~g~~~~p-------------- 196 (274)
.....++||+.++|+ ++|++++|+|||+..+++.+++..+| +..|||.|+++..||
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~ 259 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDV 259 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeC
Confidence 344678999999999 79999999999999999999995237 889999999875332
Q ss_pred -----cH--------------HHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeC
Q 024003 197 -----KV--------------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 197 -----kp--------------~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~w 244 (274)
++ --+....+.+++.+++++||||+. .||.+|+. .+|+.+++|.-
T Consensus 260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk---~~Gw~TvlI~p 324 (343)
T TIGR02244 260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKK---KRGWRTAAIIP 324 (343)
T ss_pred CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHH---hcCcEEEEEch
Confidence 11 024566777899999999999975 79999983 28999999954
No 97
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.08 E-value=2.1e-09 Score=97.30 Aligned_cols=82 Identities=17% Similarity=0.200 Sum_probs=66.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHHhCCCC-CCceEecCCC-CCcHHHHHHHHhhCCCCCCc
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTI-TPDRLYGLGT-GPKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~---~~~~~iL~~~~gl~~-~f~~v~g~~~-~pkp~~l~~~l~~l~~~~~~ 214 (274)
...++||+.++|+ ++|++++|+||++. +.+...|++ +|+.. .++.|+..+. .+|+.....+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 4679999999999 89999999999884 456688886 99975 4577776543 4888888888777776
Q ss_pred EEEEcCChhHHHHhh
Q 024003 215 LHFVEDRLATLKNVI 229 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~ 229 (274)
++||||+.+|+....
T Consensus 191 vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 VLLFGDNLLDFDDFF 205 (266)
T ss_pred EEEECCCHHHhhhhh
Confidence 799999999997643
No 98
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.05 E-value=6.7e-10 Score=100.46 Aligned_cols=80 Identities=15% Similarity=0.058 Sum_probs=60.2
Q ss_pred hCCCcEEEE---cCCchHHHHHHHHHHhCCC----CCCceEecCCCCCcHHHHHHHHhhCCCCC-CcEEEEcCChhHHHH
Q 024003 156 LASSRIYIV---TSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKN 227 (274)
Q Consensus 156 ~~g~~laIv---TnK~~~~~~~iL~~~~gl~----~~f~~v~g~~~~pkp~~l~~~l~~l~~~~-~~~l~VGDs~~Di~a 227 (274)
..++...++ |++....+...++. +++. .+|..|+... .|...+.++++.+|+++ +++++|||+.||+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m 222 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPM 222 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHH
Confidence 445554554 77777777788875 7775 4555566544 67778999999999999 999999999999999
Q ss_pred hhccCccCCCcEEEEe
Q 024003 228 VIKEPELDGWNLYLVD 243 (274)
Q Consensus 228 A~~~~~~Agv~~i~v~ 243 (274)
.+. +|+. +++.
T Consensus 223 ~~~----ag~~-vam~ 233 (273)
T PRK00192 223 LEA----ADIA-VVVP 233 (273)
T ss_pred HHh----CCee-EEeC
Confidence 997 6644 3443
No 99
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.04 E-value=1.6e-09 Score=92.37 Aligned_cols=117 Identities=24% Similarity=0.250 Sum_probs=87.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHHhCCCCCCceEe-cCC--------CCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRLY-GLG--------TGP 196 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK---------------~~~~~~~iL~~~~gl~~~f~~v~-g~~--------~~p 196 (274)
..+.||+.+.|. +.|++++|+||. .+.....+|+. .|. -|+.|+ +.. .||
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRKP 106 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRKP 106 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccCC
Confidence 368899999998 899999999994 34455666775 676 355555 321 369
Q ss_pred cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHH
Q 024003 197 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 270 (274)
Q Consensus 197 kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~ 270 (274)
+|-+++++++++++++++.+||||+..||++|.| +|+..+-+.-|.+....- +... ..++.+..++.
T Consensus 107 ~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n----~gi~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~ 173 (181)
T COG0241 107 KPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAEN----AGIKGVLVLTGIGVTTDG-AGRA--KWVFDSLAEFA 173 (181)
T ss_pred ChHHHHHHHHHhCCCccceEEecCcHHHHHHHHH----CCCCceEEEcCccccccc-cccc--ccccccHHHHH
Confidence 9999999999999999999999999999999998 788877777776543211 1111 25666666665
No 100
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.03 E-value=1.1e-09 Score=91.47 Aligned_cols=87 Identities=20% Similarity=0.241 Sum_probs=75.2
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh-
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL- 222 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~- 222 (274)
=|-+.+-+. ++|+++.|+||+.+.-+....++ +|+. .|+++ .||-+..+.++++++++++++|+||||..
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~----fi~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~ 121 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVP----FIYRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQLF 121 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCc----eeecc-cCccHHHHHHHHHHcCCChhHEEEEcchhh
Confidence 355666665 79999999999999999999996 8874 45543 37999999999999999999999999997
Q ss_pred hHHHHhhccCccCCCcEEEEe
Q 024003 223 ATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 223 ~Di~aA~~~~~~Agv~~i~v~ 243 (274)
+|+.+|+. +|+.||.|.
T Consensus 122 TDVlggnr----~G~~tIlV~ 138 (175)
T COG2179 122 TDVLGGNR----AGMRTILVE 138 (175)
T ss_pred hhhhcccc----cCcEEEEEE
Confidence 79999998 999999993
No 101
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.03 E-value=5e-09 Score=88.65 Aligned_cols=81 Identities=21% Similarity=0.400 Sum_probs=62.8
Q ss_pred CCCccHH----HHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-------------CCC----cHHH
Q 024003 145 RLYPGVS----DALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------------TGP----KVNV 200 (274)
Q Consensus 145 ~lypGv~----e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-------------~~p----kp~~ 200 (274)
.+|||+. ++|+ ++|+++.|+|+.+...++.+++. +|+...+ ++|.+ ..+ |...
T Consensus 85 ~~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 161 (192)
T PF12710_consen 85 KLFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEA 161 (192)
T ss_dssp HHCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHH
T ss_pred ccCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHH
Confidence 4555555 9998 79999999999999999999995 9987521 22211 012 8888
Q ss_pred HHHH---HhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 201 LKQL---QKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 201 l~~~---l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.++ ... +.....++|||||.+|+.+.|
T Consensus 162 l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 162 LKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 8888 555 788899999999999998865
No 102
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.00 E-value=2.1e-09 Score=106.87 Aligned_cols=108 Identities=19% Similarity=0.294 Sum_probs=82.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCcEEEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFV 218 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~~l~V 218 (274)
..+++||+.++|+ ++|++++|+||+++..++.++++ +|++ ++..- ..+|++.+.++.+ ++++++||
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~----~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQE----KGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHH----cCCEEEEE
Confidence 4579999999999 78999999999999999999996 9996 23221 2356666665543 56899999
Q ss_pred cCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHHh
Q 024003 219 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCT 271 (274)
Q Consensus 219 GDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~~ 271 (274)
||+.+|+.++++ || +++.||+++. +.... +++++. ++..+..
T Consensus 473 GDg~nD~~al~~----A~---vgia~g~g~~--~a~~~--Advvl~~~~l~~l~~ 516 (562)
T TIGR01511 473 GDGINDAPALAQ----AD---VGIAIGAGTD--VAIEA--ADVVLMRNDLNDVAT 516 (562)
T ss_pred eCCCccHHHHhh----CC---EEEEeCCcCH--HHHhh--CCEEEeCCCHHHHHH
Confidence 999999999997 77 5899997653 33333 347774 6666644
No 103
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.97 E-value=1.5e-09 Score=94.97 Aligned_cols=84 Identities=20% Similarity=0.141 Sum_probs=61.4
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC------CC-CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~------~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
.+.+.++++.+.+...+++ ++.. +..+.+.. .+ +|+..+..+++.+|++++++++|||+.||+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~-- 191 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEV-- 191 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh--
Confidence 4567778888888888885 6542 33333322 12 79999999999999999999999999999999997
Q ss_pred ccCCCcEEEEeCCCCChHHHHh
Q 024003 233 ELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
+|+. +++. +..+++++
T Consensus 192 --ag~~-vam~---Na~~~vk~ 207 (230)
T PRK01158 192 --AGFG-VAVA---NADEELKE 207 (230)
T ss_pred --cCce-EEec---CccHHHHH
Confidence 6664 3443 33445654
No 104
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.95 E-value=2.2e-09 Score=111.25 Aligned_cols=114 Identities=17% Similarity=0.171 Sum_probs=88.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
..+++||+.++|+ ++|++++++|++.+..++.++++ +|++.+|..+ ...+|.+ ++++++..+++++|||
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~---~p~~K~~----~i~~l~~~~~~v~~vG 719 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV---LPDGKAE----AIKRLQSQGRQVAMVG 719 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC---CHHHHHH----HHHHHhhcCCEEEEEe
Confidence 4589999999999 78999999999999999999996 9997544322 1113444 5555666788999999
Q ss_pred CChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 220 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
|+.||+.++++ ||+ +|.||+++....+.+ ++.....++..+.+.+
T Consensus 720 Dg~nD~~al~~----Agv---gia~g~g~~~a~~~a--d~vl~~~~~~~i~~~i 764 (834)
T PRK10671 720 DGINDAPALAQ----ADV---GIAMGGGSDVAIETA--AITLMRHSLMGVADAL 764 (834)
T ss_pred CCHHHHHHHHh----CCe---eEEecCCCHHHHHhC--CEEEecCCHHHHHHHH
Confidence 99999999997 776 899998877666654 5557777888776543
No 105
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.93 E-value=2.5e-08 Score=90.58 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=71.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceE------ecCC---C-CCcH---------HH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------YGLG---T-GPKV---------NV 200 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v------~g~~---~-~pkp---------~~ 200 (274)
..++.||+.++|+ ++|++++|+|+-....++.+|++ +|+...+..| +..+ . +|.| .+
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 4689999999999 79999999999999999999996 9997677677 4322 1 2444 45
Q ss_pred HHHHHhhCC--CCCCcEEEEcCChhHHHHhh
Q 024003 201 LKQLQKKPE--HQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 201 l~~~l~~l~--~~~~~~l~VGDs~~Di~aA~ 229 (274)
++.+.+.++ ..+++||+||||.+|+.+|.
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 556788888 88999999999999999986
No 106
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.88 E-value=3.1e-09 Score=94.56 Aligned_cols=87 Identities=16% Similarity=0.329 Sum_probs=72.6
Q ss_pred CCCCCCccHHHHHH---hCCCcEEEEcCCchHHHH--HHHHHHhCCCC-CCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 142 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVE--TLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~--~iL~~~~gl~~-~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
...++|||+.|+|+ ++|++++|+|||+++... ..|++ +|+.. +|+.|+++..- ..+.+.+++++++..|+++
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~-~~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEI-AVQMILESKKRFDIRNGII 98 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHH-HHHHHHhhhhhccCCCceE
Confidence 34689999999998 789999999999998876 78896 99998 99999986521 1257777778888899999
Q ss_pred EEEcCChhHHHHhhc
Q 024003 216 HFVEDRLATLKNVIK 230 (274)
Q Consensus 216 l~VGDs~~Di~aA~~ 230 (274)
+||||+..|++....
T Consensus 99 ~~vGd~~~d~~~~~~ 113 (242)
T TIGR01459 99 YLLGHLENDIINLMQ 113 (242)
T ss_pred EEeCCcccchhhhcC
Confidence 999999999876543
No 107
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.87 E-value=4.5e-09 Score=88.21 Aligned_cols=87 Identities=22% Similarity=0.260 Sum_probs=60.5
Q ss_pred CCccHHHHHH---hCCCcEEEEcCC---ch-----------HHHHHHHHHHhCCCCCCceEecCC----CCCcHHHHHHH
Q 024003 146 LYPGVSDALK---LASSRIYIVTSN---QS-----------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQL 204 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK---~~-----------~~~~~iL~~~~gl~~~f~~v~g~~----~~pkp~~l~~~ 204 (274)
++|+|.+.|+ +.|++++|+||- .. .-.+.+++. +++. +...+... .||.|-++..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 5578999999 899999999986 22 344556664 6664 33333322 36999999999
Q ss_pred HhhCC----CCCCcEEEEcCC-----------hhHHHHhhccCccCCCcE
Q 024003 205 QKKPE----HQGLRLHFVEDR-----------LATLKNVIKEPELDGWNL 239 (274)
Q Consensus 205 l~~l~----~~~~~~l~VGDs-----------~~Di~aA~~~~~~Agv~~ 239 (274)
++.+. ++.++++||||+ ..|..-|.| +||++
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N----~gi~f 152 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALN----CGIKF 152 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHH----HT--E
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHH----cCCcc
Confidence 99886 488999999996 789999998 77765
No 108
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=98.84 E-value=2.2e-08 Score=90.69 Aligned_cols=119 Identities=21% Similarity=0.287 Sum_probs=92.4
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHH------------HHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCC
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRF------------VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE 209 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~------------~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~ 209 (274)
..-|.-..+.+. .+| ...|+||..... ....+++..|-. . .++| ||.|.++..+++.++
T Consensus 132 ~~~~e~l~~a~~~i~~g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~-~--~~~G---KP~~~i~~~al~~~~ 204 (269)
T COG0647 132 TLTYEKLAEALLAIAAG-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGRE-P--TVIG---KPSPAIYEAALEKLG 204 (269)
T ss_pred CCCHHHHHHHHHHHHcC-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCc-c--cccC---CCCHHHHHHHHHHhC
Confidence 344555555555 677 668999987543 333444312222 1 3445 699999999999999
Q ss_pred CCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 210 HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 210 ~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
..+++++||||+. +||.+|++ +|+.++.|.-|..+.+++......|.+++.|+.++...+
T Consensus 205 ~~~~~~~mVGD~~~TDI~~a~~----~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 205 LDRSEVLMVGDRLDTDILGAKA----AGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITAL 265 (269)
T ss_pred CCcccEEEEcCCchhhHHHHHH----cCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhh
Confidence 9999999999996 79999998 999999999999999888878888999999999987654
No 109
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.82 E-value=3.9e-08 Score=85.79 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=59.6
Q ss_pred CCCcEEE-EcCCchHHHHHHHHHHhCCC----CCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 157 ASSRIYI-VTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 157 ~g~~laI-vTnK~~~~~~~iL~~~~gl~----~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
.++.+.+ .|++....+...+++ .++. .+|..|.+.+. .|+..+.++++.+|++++++++|||+.||+.+-+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~- 213 (221)
T TIGR02463 137 ASVPLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEV- 213 (221)
T ss_pred CCccEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHh-
Confidence 4555566 677888888888885 7775 45555554332 57888999999999999999999999999999997
Q ss_pred CccCCCcE
Q 024003 232 PELDGWNL 239 (274)
Q Consensus 232 ~~~Agv~~ 239 (274)
||..+
T Consensus 214 ---ag~~v 218 (221)
T TIGR02463 214 ---ADYAV 218 (221)
T ss_pred ---CCceE
Confidence 67554
No 110
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.82 E-value=2.1e-09 Score=90.39 Aligned_cols=92 Identities=8% Similarity=-0.047 Sum_probs=75.4
Q ss_pred CCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCC-CCceEecCCCC--CcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 145 RLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 145 ~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~-~f~~v~g~~~~--pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
..=||+.|+|+ .+.+.++|.|++++.+++.++++ ++... +|+.+++.+.. .++. +.+.+..+|.+++++||||
T Consensus 42 ~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiVD 119 (162)
T TIGR02251 42 FKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIIID 119 (162)
T ss_pred EECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEEe
Confidence 44599999999 56699999999999999999996 98875 88988887642 1222 5667788899999999999
Q ss_pred CChhHHHHhhccCccCCCcEEEE
Q 024003 220 DRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i~v 242 (274)
|++.|+.++++ +||++..-
T Consensus 120 D~~~~~~~~~~----NgI~i~~f 138 (162)
T TIGR02251 120 NSPYSYSLQPD----NAIPIKSW 138 (162)
T ss_pred CChhhhccCcc----CEeecCCC
Confidence 99999999987 67776443
No 111
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.80 E-value=3.3e-09 Score=92.44 Aligned_cols=85 Identities=15% Similarity=0.076 Sum_probs=59.4
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecC---C---C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G---T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 232 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~---~---~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~ 232 (274)
...+.+....+.+..++++ ++... ..+.+. + . .+|...+.++++++|++++++++|||+.||+.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~-- 183 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKE-LGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEV-- 183 (225)
T ss_pred eEEEeecCCHHHHHHHHHh-cCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHh--
Confidence 3456666667778888885 76531 111111 1 1 289999999999999999999999999999999997
Q ss_pred ccCCCcEEEEeCCCCChHHHHhc
Q 024003 233 ELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 233 ~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
+|+. +++ | +..+++++.
T Consensus 184 --ag~~-vam--~-Na~~~~k~~ 200 (225)
T TIGR01482 184 --PGFG-VAV--A-NAQPELKEW 200 (225)
T ss_pred --cCce-EEc--C-ChhHHHHHh
Confidence 6653 444 4 334455543
No 112
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.69 E-value=1.1e-07 Score=82.71 Aligned_cols=101 Identities=23% Similarity=0.300 Sum_probs=77.7
Q ss_pred CCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-----CC-------------------
Q 024003 144 NRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG------------------- 195 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g-~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-----~~------------------- 195 (274)
.+.-||+.++++ +.| +-+.|||-...-|++.+|++ +|+...|+.|+... .+
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 577899999999 556 48999999999999999995 99999999888642 11
Q ss_pred -CcHHHHHHHHhhC---CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 196 -PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 196 -pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
-|-.++.++..+. |+.-++.+||||+.+|+-.-.. ..+..++--.-||--
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~---Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLR---LRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchh---cccCceecccCCCch
Confidence 1224555554432 6777799999999999987665 467788888888843
No 113
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.66 E-value=9e-08 Score=99.94 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=87.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-C-------------------CCcHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------------GPKVNV 200 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~-------------------~pkp~~ 200 (274)
.+++||+.++++ ++|+++.++|++....+..+.++ .|+..+++.+++++ - ...|+.
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 378999999999 89999999999999999999996 99987766544321 0 145554
Q ss_pred HHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCcee--echhHHHh
Q 024003 201 LKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQL--LQLSDFCT 271 (274)
Q Consensus 201 l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~--~~~~~~~~ 271 (274)
=..+.+.++...+.+.||||+.||+.+.++ |+ ||+.||++ ..+..... +|+++ +++.++..
T Consensus 606 K~~iv~~lq~~g~~v~mvGDGvND~pAl~~----Ad---VGia~g~~-g~~va~~a--aDivl~dd~~~~i~~ 668 (884)
T TIGR01522 606 KMKIVKALQKRGDVVAMTGDGVNDAPALKL----AD---IGVAMGQT-GTDVAKEA--ADMILTDDDFATILS 668 (884)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHHh----CC---eeEecCCC-cCHHHHHh--cCEEEcCCCHHHHHH
Confidence 455555555455789999999999999998 76 69999975 33444333 45888 45777654
No 114
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.52 E-value=1.2e-07 Score=84.17 Aligned_cols=85 Identities=14% Similarity=0.115 Sum_probs=59.7
Q ss_pred hCCCcEEEEcCCchHHHH-HHHHHHhCCCCCCceE---ecCC----CCCcHHHHHHHHhhCCCCCCcE-EEEcCCh-hHH
Q 024003 156 LASSRIYIVTSNQSRFVE-TLLRELAGVTITPDRL---YGLG----TGPKVNVLKQLQKKPEHQGLRL-HFVEDRL-ATL 225 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~-~iL~~~~gl~~~f~~v---~g~~----~~pkp~~l~~~l~~l~~~~~~~-l~VGDs~-~Di 225 (274)
++|-...|+||++.-... .... +.+...+|+.+ .|.. .||+|+++..++++++.+++++ +||||+. +||
T Consensus 142 ~~~~~~~i~tN~d~~~~~~~g~~-~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di 220 (236)
T TIGR01460 142 AEGDVPFIAANRDDLVRLGDGRF-RPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI 220 (236)
T ss_pred hCCCCeEEEECCCCCCCCCCCcE-eecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence 455356788997742111 0111 12333333322 2322 2699999999999999998887 9999998 899
Q ss_pred HHhhccCccCCCcEEEEeCC
Q 024003 226 KNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 226 ~aA~~~~~~Agv~~i~v~wG 245 (274)
.+|++ +|+++++|+||
T Consensus 221 ~~A~~----~G~~~i~v~~G 236 (236)
T TIGR01460 221 LGAKN----AGFDTLLVLTG 236 (236)
T ss_pred HHHHH----CCCcEEEEecC
Confidence 99998 99999999998
No 115
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.49 E-value=8.3e-07 Score=75.21 Aligned_cols=99 Identities=20% Similarity=0.285 Sum_probs=70.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEc-CCchHHHHHHHHHHhCCC----------CCCceEecCCCCCcHHHHHHHHhhC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVT-SNQSRFVETLLRELAGVT----------ITPDRLYGLGTGPKVNVLKQLQKKP 208 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvT-nK~~~~~~~iL~~~~gl~----------~~f~~v~g~~~~pkp~~l~~~l~~l 208 (274)
..++||+|.+.|. ++|+++||+| +...+.|+.+|+. +++. .+|+.+-=. .++|...+..+.++.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~-~gsK~~Hf~~i~~~t 120 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIY-PGSKTTHFRRIHRKT 120 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEES-SS-HHHHHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhhee-cCchHHHHHHHHHhc
Confidence 3689999999999 7999999999 4556799999996 9999 777763211 237889999999999
Q ss_pred CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCC
Q 024003 209 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 209 ~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~ 247 (274)
|++.++++|+.|....++...+ -||.|+.|.-|-.
T Consensus 121 gI~y~eMlFFDDe~~N~~~v~~----lGV~~v~v~~Glt 155 (169)
T PF12689_consen 121 GIPYEEMLFFDDESRNIEVVSK----LGVTCVLVPDGLT 155 (169)
T ss_dssp ---GGGEEEEES-HHHHHHHHT----TT-EEEE-SSS--
T ss_pred CCChhHEEEecCchhcceeeEe----cCcEEEEeCCCCC
Confidence 9999999999999999999987 8999999998864
No 116
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.46 E-value=9.2e-07 Score=90.81 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=82.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
.+++||+.++|+ ++|++++++|++....++.+.++ +|++.++. ....-|++.+.++.+ +.+++||||
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~----~~p~~K~~~v~~l~~-----~~~v~mvGD 636 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG----LLPEDKVKAVTELNQ-----HAPLAMVGD 636 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC----CCHHHHHHHHHHHhc-----CCCEEEEEC
Confidence 589999999999 78999999999999999999996 99964332 111136666665432 357999999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
+.||+.+.++ |+ ||+.||+++....+. ++.-....++..|...
T Consensus 637 giNDapAl~~----A~---vgia~g~~~~~a~~~--adivl~~~~l~~l~~~ 679 (741)
T PRK11033 637 GINDAPAMKA----AS---IGIAMGSGTDVALET--ADAALTHNRLRGLAQM 679 (741)
T ss_pred CHHhHHHHHh----CC---eeEEecCCCHHHHHh--CCEEEecCCHHHHHHH
Confidence 9999999997 66 899999877655444 3433444566666543
No 117
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.46 E-value=2.7e-07 Score=85.71 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=59.6
Q ss_pred CCcHHHHHHHHhhC--------CC-----CCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCC
Q 024003 195 GPKVNVLKQLQKKP--------EH-----QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR 260 (274)
Q Consensus 195 ~pkp~~l~~~l~~l--------~~-----~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~ 260 (274)
||+|.++..+++.+ +. ++++++||||+. +||.+|++ +|+.++.|.+|-.+.++. .....|+
T Consensus 233 KP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~----~G~~silV~tG~~~~~~~-~~~~~p~ 307 (321)
T TIGR01456 233 KPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQN----YGWFSCLVKTGVYNGGDD-LKECKPT 307 (321)
T ss_pred CCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHh----CCceEEEecccccCCCCC-CCCCCCC
Confidence 69999999988777 43 447999999998 99999998 899999999994333332 2345689
Q ss_pred ceeechhHHHhhc
Q 024003 261 IQLLQLSDFCTKL 273 (274)
Q Consensus 261 ~~~~~~~~~~~~~ 273 (274)
+++.|+.++...|
T Consensus 308 ~vv~~l~e~~~~i 320 (321)
T TIGR01456 308 LIVNDVFDAVTKI 320 (321)
T ss_pred EEECCHHHHHHHh
Confidence 9999999998765
No 118
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.42 E-value=4.6e-07 Score=77.77 Aligned_cols=106 Identities=17% Similarity=0.161 Sum_probs=67.7
Q ss_pred CCCCCCCccHHHHHH---hCCCcEEEEcCCch-------HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCC
Q 024003 141 IGANRLYPGVSDALK---LASSRIYIVTSNQS-------RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g~~laIvTnK~~-------~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~ 210 (274)
....+|+||+.|+|+ +.|..+.++|+.+. +.+..-|++|||...+-..+++++ |. .++.
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~--------~v~~ 137 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT--------LVGG 137 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG--------GC--
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC--------eEec
Confidence 345689999999999 78877777776654 356677887676544445566543 21 2233
Q ss_pred CCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 211 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 211 ~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
+ ++|.|++.-+..+.+ +|+++|....-|+.... .-..+.|+.++...
T Consensus 138 D----vlIDD~~~n~~~~~~----~g~~~iLfd~p~Nr~~~-------~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 138 D----VLIDDRPHNLEQFAN----AGIPVILFDQPYNRDES-------NFPRVNNWEEIEDL 184 (191)
T ss_dssp S----EEEESSSHHHSS-SS----ESSEEEEE--GGGTT---------TSEEE-STTSHHHH
T ss_pred c----EEecCChHHHHhccC----CCceEEEEcCCCCCCCC-------CCccCCCHHHHHHH
Confidence 3 999999999998876 89999999999976533 34677787777543
No 119
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.41 E-value=8.9e-07 Score=71.35 Aligned_cols=87 Identities=17% Similarity=0.146 Sum_probs=68.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhC------CCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP------EHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l------~~~~~ 213 (274)
...+||.|.++|. +.|+-++.+|=....-+.+.|.. +++..||+.++-....-|-.++.+++..+ .++|.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence 3689999999999 79999999998888888899997 99999999888642212335777766654 47899
Q ss_pred cEEEEcCChhHHHHhhc
Q 024003 214 RLHFVEDRLATLKNVIK 230 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~~ 230 (274)
+++|+.|+..-+.--..
T Consensus 118 ~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 118 EIVYLDDRRIHFGNIWE 134 (164)
T ss_pred eEEEEecccccHHHHHH
Confidence 99999999876655444
No 120
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.37 E-value=3.5e-06 Score=76.68 Aligned_cols=119 Identities=23% Similarity=0.256 Sum_probs=86.6
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHH--------------HHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhh
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRF--------------VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKK 207 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~--------------~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~ 207 (274)
+--|+-....+. +.---+.|+||-..-+ +..+-.. .| .=-.|+| ||.+.++..++++
T Consensus 164 hfsy~KL~kA~~yLqnP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~-t~---R~P~v~G---KP~~~m~~~l~~~ 236 (306)
T KOG2882|consen 164 HFSYPKLMKALNYLQNPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFA-TG---RQPIVLG---KPSTFMFEYLLEK 236 (306)
T ss_pred ccCHHHHHHHHHHhCCCCcEEEeccCccccCCCCCeeccCCccHHHHHHHH-hc---CCCeecC---CCCHHHHHHHHHH
Confidence 344666666666 4444577899877622 1111110 11 1112222 5999999999999
Q ss_pred CCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCCChHHHHhc----CCCCCceeechhHHHhhc
Q 024003 208 PEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA----ASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 208 l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a----~~~P~~~~~~~~~~~~~~ 273 (274)
.++.|++++|||||. .||.-|++ +|+.++.|.-|-++.++.+.+ ...||+-++++.++...+
T Consensus 237 ~~i~psRt~mvGDRL~TDIlFG~~----~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~~ 303 (306)
T KOG2882|consen 237 FNIDPSRTCMVGDRLDTDILFGKN----CGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPLL 303 (306)
T ss_pred cCCCcceEEEEcccchhhhhHhhc----cCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhhc
Confidence 999999999999997 69999998 899999999999988877665 557999999999886543
No 121
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.36 E-value=2.5e-06 Score=76.54 Aligned_cols=52 Identities=17% Similarity=0.079 Sum_probs=42.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. +|.-| +..+++++.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~---~vAm~-NA~~~vK~~ 247 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEY----AGV---GVAMG-NAIPSVKEV 247 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh----CCc---eEEec-CccHHHHHh
Confidence 88999999999999999999999999999999997 664 44445 334556553
No 122
>PRK10976 putative hydrolase; Provisional
Probab=98.35 E-value=1.6e-06 Score=77.67 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=42.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||.. +++ | +..+++++.
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~----ag~~-vAm--~-NA~~~vK~~ 241 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSM----AGKG-CIM--G-NAHQRLKDL 241 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHH----cCCC-eee--c-CCcHHHHHh
Confidence 78999999999999999999999999999999997 6653 444 4 334556553
No 123
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.34 E-value=2.1e-05 Score=67.59 Aligned_cols=85 Identities=19% Similarity=0.387 Sum_probs=68.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC--C------Cc---eEecCC-------CCCcHHHH
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--T------PD---RLYGLG-------TGPKVNVL 201 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~--~------f~---~v~g~~-------~~pkp~~l 201 (274)
..++=|||+|+.. ++|.+++++|.--..++..+-.+ +||.. . |+ ...|.+ ++-|++.+
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 4678899999998 89999999999999999999997 99974 1 11 122212 23789999
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
..+.+ +..-..++||||..+|+++...
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccCCc
Confidence 98887 7777899999999999997653
No 124
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.28 E-value=1.6e-06 Score=72.56 Aligned_cols=84 Identities=13% Similarity=0.094 Sum_probs=64.1
Q ss_pred CCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCC-CCC-ceEecCCC--CCcHHHHHHHHhhCCCCCCcE
Q 024003 142 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGT--GPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 142 ~~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~-~~f-~~v~g~~~--~pkp~~l~~~l~~l~~~~~~~ 215 (274)
..+++|||+.++|+ .+++.++|+|||++.+|..+++. ++.. .+| +.|+|.+. ++...-|. .-++.+.+.+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~---~i~~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLL---RLFPADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHH---HHcCCCcccE
Confidence 34789999999999 67799999999999999999996 9988 488 78888653 22222222 2246788899
Q ss_pred EEEcCChhHHHHhh
Q 024003 216 HFVEDRLATLKNVI 229 (274)
Q Consensus 216 l~VGDs~~Di~aA~ 229 (274)
++|.|++.=...-.
T Consensus 131 vivDd~~~~~~~~~ 144 (156)
T TIGR02250 131 VIIDDREDVWPWHK 144 (156)
T ss_pred EEEeCCHHHhhcCc
Confidence 99999985554433
No 125
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.28 E-value=7.2e-06 Score=69.69 Aligned_cols=106 Identities=16% Similarity=0.211 Sum_probs=75.2
Q ss_pred HHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHh---CCCCCCceEecCCCC--CcHHHHHH
Q 024003 132 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLGTG--PKVNVLKQ 203 (274)
Q Consensus 132 ~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~---gl~~~f~~v~g~~~~--pkp~~l~~ 203 (274)
|..-|+.+-. ...+||.+.+.|+ ++|+++.|-|+-+-..-+-+.. |- .|..+|+..+....+ .......+
T Consensus 91 Wa~Gy~sgel-kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fg-hs~agdL~~lfsGyfDttiG~KrE~~SY~k 168 (229)
T COG4229 91 WAHGYESGEL-KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFG-HSDAGDLNSLFSGYFDTTIGKKRESQSYAK 168 (229)
T ss_pred HHhccccCcc-ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhc-ccccccHHhhhcceeeccccccccchhHHH
Confidence 3344444433 4689999999999 8999999999987664443333 21 223334333322222 33456788
Q ss_pred HHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEe
Q 024003 204 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 204 ~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
+....|++|.+++|+-|.+.-+.||+. +|+.++++.
T Consensus 169 Ia~~iGl~p~eilFLSDn~~EL~AA~~----vGl~t~l~~ 204 (229)
T COG4229 169 IAGDIGLPPAEILFLSDNPEELKAAAG----VGLATGLAV 204 (229)
T ss_pred HHHhcCCCchheEEecCCHHHHHHHHh----cchheeeee
Confidence 889999999999999999999999998 899888764
No 126
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.27 E-value=3.4e-06 Score=75.97 Aligned_cols=51 Identities=14% Similarity=0.039 Sum_probs=41.3
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
.|-..+..+++.+|+++++++.|||+.||+.+=+. +|. ++++ | +..+++++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~----ag~-~vAm--~-Na~~~vK~ 238 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGS----VGR-GFIM--G-NAMPQLRA 238 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHH----cCC-ceec--c-CChHHHHH
Confidence 78999999999999999999999999999999997 663 2344 4 34455554
No 127
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.26 E-value=2.4e-06 Score=76.21 Aligned_cols=52 Identities=17% Similarity=0.172 Sum_probs=42.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|-..+..+++.++++++++++|||+.||+.+.+. +|+. |..| +..+++++.
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~----~~~~---~a~~-na~~~~k~~ 239 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEA----AGYG---VAMG-NADEELKAL 239 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHh----CCce---eEec-CchHHHHHh
Confidence 78999999999999999999999999999999997 7754 3334 334555543
No 128
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.15 E-value=8.3e-06 Score=72.03 Aligned_cols=41 Identities=10% Similarity=-0.050 Sum_probs=34.5
Q ss_pred CcHHHHHHHHhhCCC--CCCcEEEEcCChhHHHHhhccCccCCCcEE
Q 024003 196 PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 196 pkp~~l~~~l~~l~~--~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i 240 (274)
.|+..+..+++.+++ ++.++++|||+.||+.+-+. +|++++
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~----ag~~v~ 223 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEV----VDLAFL 223 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHh----CCCcEe
Confidence 788888888888865 67799999999999999997 776643
No 129
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.13 E-value=1.9e-05 Score=67.29 Aligned_cols=82 Identities=16% Similarity=0.282 Sum_probs=60.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhC----CC---CCCce----------EecCC-C--C-CcHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG----VT---ITPDR----------LYGLG-T--G-PKVN 199 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~g----l~---~~f~~----------v~g~~-~--~-pkp~ 199 (274)
.++=||..|+.+ +++++..|+|+--..++..++++ .+ +. .++.- |++.+ + + -|+.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~ 150 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS 150 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch
Confidence 578899999999 89999999999999999999997 54 11 11111 11111 1 1 4666
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
.+.... -.++.++|.|||..|+.+|+.
T Consensus 151 vI~~l~----e~~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 151 VIHELS----EPNESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred hHHHhh----cCCceEEEecCCcccccHhhh
Confidence 665543 356679999999999999997
No 130
>PLN02887 hydrolase family protein
Probab=98.05 E-value=7.1e-05 Score=74.84 Aligned_cols=52 Identities=12% Similarity=-0.001 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|...+..+++.+|+++++++.|||+.||+.+-+. ||. +|.-|-.. +++++.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~----AG~---gVAMgNA~-eeVK~~ 558 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL----ASL---GVALSNGA-EKTKAV 558 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH----CCC---EEEeCCCC-HHHHHh
Confidence 89999999999999999999999999999999997 664 45556443 455543
No 131
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.02 E-value=2.7e-05 Score=81.88 Aligned_cols=113 Identities=18% Similarity=0.234 Sum_probs=79.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC--------Cc-------------------eEecCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT--------PD-------------------RLYGLG 193 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~--------f~-------------------~v~g~~ 193 (274)
.+|+||+.+.++ ++|+++.++|+.....+..+.++ .|+... ++ .|++ +
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~a-r 613 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFS-R 613 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEE-e
Confidence 368999999999 89999999999999999999996 998531 11 1222 1
Q ss_pred CCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec--hhHHHh
Q 024003 194 TGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFCT 271 (274)
Q Consensus 194 ~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~--~~~~~~ 271 (274)
..|+-=.++++.++...+.+.|+||+.||+.+-++ |++ ||.||.++ + .... .+|+++.+ +..+.+
T Consensus 614 --~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~----AdV---Gia~g~g~-~-~ak~--aAD~vl~dd~f~~i~~ 680 (917)
T TIGR01116 614 --VEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKK----ADI---GIAMGSGT-E-VAKE--ASDMVLADDNFATIVA 680 (917)
T ss_pred --cCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHh----CCe---eEECCCCc-H-HHHH--hcCeEEccCCHHHHHH
Confidence 12322233444444456789999999999999998 774 88899553 2 3222 24588877 666543
No 132
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.02 E-value=1.8e-05 Score=70.83 Aligned_cols=52 Identities=19% Similarity=0.078 Sum_probs=40.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|...+..+++++|+++++++.+||+.||+.+=+. +| .+|.=|=. .++++++
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~----ag---~gvam~Na-~~~~k~~ 240 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEV----AG---LGVAMGNA-DEELKEL 240 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHh----cC---eeeeccCC-CHHHHhh
Confidence 78899999999999999999999999999999886 55 34444533 3445443
No 133
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.02 E-value=6.7e-05 Score=62.73 Aligned_cols=89 Identities=16% Similarity=0.203 Sum_probs=55.2
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHH---HHHHHH--hCCCCCCceEecCC---C--------C--C---cHHHHH
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVE---TLLREL--AGVTITPDRLYGLG---T--------G--P---KVNVLK 202 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~---~iL~~~--~gl~~~f~~v~g~~---~--------~--p---kp~~l~ 202 (274)
.||+.+++. ++|+++.++|+.+...+. ..|+.. .|.......+++.. . . | |.+.+.
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~ 108 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLR 108 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHH
Confidence 478888887 789999999999988774 666631 12211122344321 0 1 3 455666
Q ss_pred HHHhhCCCCCCcEE-EEcCChhHHHHhhccCccCCCcE
Q 024003 203 QLQKKPEHQGLRLH-FVEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 203 ~~l~~l~~~~~~~l-~VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
.+++.+.-..-..+ -+|++.+|+++=++ +|++.
T Consensus 109 ~i~~~~~~~~~~f~~~~gn~~~D~~~y~~----~gi~~ 142 (157)
T smart00775 109 DIKSLFPPQGNPFYAGFGNRITDVISYSA----VGIPP 142 (157)
T ss_pred HHHHhcCCCCCCEEEEeCCCchhHHHHHH----cCCCh
Confidence 66654432222344 37889999999987 67763
No 134
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.01 E-value=2.4e-05 Score=69.89 Aligned_cols=44 Identities=11% Similarity=-0.006 Sum_probs=37.6
Q ss_pred CcHHHHHHHHhhCCCC--CCcEEEEcCChhHHHHhhccCccCCCcEEEEeC
Q 024003 196 PKVNVLKQLQKKPEHQ--GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~--~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~w 244 (274)
.|...+.++++.++++ .+++++|||+.||+.+.+. +|.. |++.-
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~----ag~~-vam~N 221 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEV----VDLA-VVVPG 221 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHH----CCEE-EEeCC
Confidence 7888999999999999 9999999999999999997 6644 44433
No 135
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.99 E-value=2.5e-05 Score=70.53 Aligned_cols=35 Identities=9% Similarity=-0.190 Sum_probs=33.6
Q ss_pred CcHHHHHHHHhhCCC---CCCcEEEEcCChhHHHHhhc
Q 024003 196 PKVNVLKQLQKKPEH---QGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 196 pkp~~l~~~l~~l~~---~~~~~l~VGDs~~Di~aA~~ 230 (274)
.|-..+..+++.+|+ ++++++.|||+.||+.+=+.
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ 224 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDV 224 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHh
Confidence 889999999999999 99999999999999999987
No 136
>PLN02645 phosphoglycolate phosphatase
Probab=97.98 E-value=3.6e-05 Score=71.20 Aligned_cols=88 Identities=15% Similarity=0.249 Sum_probs=67.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHH---HHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~i---L~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+|||+.|+|+ ++|+++.++||++....+.+ |++ +|+...++.|+++. ..+...+++.+..+.+.+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~-----~~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSS-----FAAAAYLKSINFPKDKKVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehH-----HHHHHHHHhhccCCCCEEE
Confidence 478999999998 79999999999984444444 464 89887888888742 3556666666655556799
Q ss_pred EcCChhHHHHhhccCccCCCcEEE
Q 024003 218 VEDRLATLKNVIKEPELDGWNLYL 241 (274)
Q Consensus 218 VGDs~~Di~aA~~~~~~Agv~~i~ 241 (274)
|+++..+.+.+++ +|+.+++
T Consensus 117 viG~~~~~~~l~~----~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEELEL----AGFQYLG 136 (311)
T ss_pred EEcCHHHHHHHHH----CCCEEec
Confidence 9999999999987 7888765
No 137
>PTZ00445 p36-lilke protein; Provisional
Probab=97.93 E-value=3.6e-05 Score=67.21 Aligned_cols=93 Identities=22% Similarity=0.285 Sum_probs=72.9
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHHhCCCCCCceEecCC--------------
Q 024003 146 LYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG-------------- 193 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK~~---------------~~~~~iL~~~~gl~~~f~~v~g~~-------------- 193 (274)
+=|...+++. +.|++++|||=.++ ++++..|++ .+-+.-...|++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 3455666666 79999999996555 368888884 55554445555421
Q ss_pred -CCCcHHH--H--HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEe
Q 024003 194 -TGPKVNV--L--KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 194 -~~pkp~~--l--~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
.||+|++ . ++++++.|+.|++++||.|+...+++|++ .|+.++-+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~----lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALK----EGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHH----CCCEEEEcC
Confidence 1488887 6 99999999999999999999999999998 899999886
No 138
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=97.87 E-value=0.00011 Score=62.16 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=66.1
Q ss_pred CCCCccHHHHHH---hCCC--cEEEEcCC-------chHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCC--
Q 024003 144 NRLYPGVSDALK---LASS--RIYIVTSN-------QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPE-- 209 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~--~laIvTnK-------~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~-- 209 (274)
..+.|-+.+.++ +.+. ++.|+||. ....++.+-+. +|+. .+.-...|| ....++++.++
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~kKP--~~~~~i~~~~~~~ 130 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAKKP--GCFREILKYFKCQ 130 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCCCC--ccHHHHHHHHhhc
Confidence 567788888887 4444 59999997 46777777775 8863 232223344 44444444443
Q ss_pred ---CCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCC
Q 024003 210 ---HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGY 246 (274)
Q Consensus 210 ---~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy 246 (274)
..|++++||||+. +||.+|+. .|+.+|+|+=|-
T Consensus 131 ~~~~~p~eiavIGDrl~TDVl~gN~----~G~~tilv~~gv 167 (168)
T PF09419_consen 131 KVVTSPSEIAVIGDRLFTDVLMGNR----MGSYTILVTDGV 167 (168)
T ss_pred cCCCCchhEEEEcchHHHHHHHhhc----cCceEEEEecCc
Confidence 3599999999997 79999997 899999998773
No 139
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.78 E-value=2.9e-05 Score=64.56 Aligned_cols=78 Identities=23% Similarity=0.323 Sum_probs=65.4
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 152 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 152 e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
.+|.+.|++++|+|.+....+++-.+. +|+..+|. |.. .|-..+.++++++++.++++.||||-.+|+-.=.+
T Consensus 45 k~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q---G~~--dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~- 117 (170)
T COG1778 45 KLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ---GIS--DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK- 117 (170)
T ss_pred HHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee---chH--hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH-
Confidence 455589999999999999999999997 99975433 432 57889999999999999999999999999988776
Q ss_pred CccCCCcE
Q 024003 232 PELDGWNL 239 (274)
Q Consensus 232 ~~~Agv~~ 239 (274)
.|.++
T Consensus 118 ---vGls~ 122 (170)
T COG1778 118 ---VGLSV 122 (170)
T ss_pred ---cCCcc
Confidence 45553
No 140
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.75 E-value=4.2e-05 Score=69.95 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=42.4
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC
Q 024003 148 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 193 (274)
Q Consensus 148 pGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~ 193 (274)
||+.|+|+ ++|++++|+||++++.+...|++ +|+..||+.|++++
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~G 196 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGG 196 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECC
Confidence 99999999 79999999999999999999996 99999999999765
No 141
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.70 E-value=5.8e-05 Score=66.97 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=56.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHHhCCCCCCceEe-cCCC-C------CcHHHHHHHHhh-C
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLY-GLGT-G------PKVNVLKQLQKK-P 208 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~---~~~~iL~~~~gl~~~f~~v~-g~~~-~------pkp~~l~~~l~~-l 208 (274)
.++.||+.++++ ++|+++.++||.++. .+..-|.+ .|....-..+. +... . -|..-...+.++ +
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy 192 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGY 192 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhccccccccccccccccchHHHHHHHHcCC
Confidence 378899999999 899999999997755 66667775 78764333333 2221 1 255555555555 3
Q ss_pred CCCCCcEEEEcCChhHHHHhh
Q 024003 209 EHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 209 ~~~~~~~l~VGDs~~Di~aA~ 229 (274)
.+ +.+|||...|+..++
T Consensus 193 ~I----i~~iGD~~~D~~~~~ 209 (229)
T PF03767_consen 193 RI----IANIGDQLSDFSGAK 209 (229)
T ss_dssp EE----EEEEESSGGGCHCTH
T ss_pred cE----EEEeCCCHHHhhccc
Confidence 34 589999999999844
No 142
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.62 E-value=0.00012 Score=63.47 Aligned_cols=88 Identities=13% Similarity=0.077 Sum_probs=61.8
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCCc---eEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f~---~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
..++++|++....+...++. .++..++. .-+......|...+..+++++|++++++++|||+.||+.+.+. +
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~----a 182 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRV----V 182 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHh----C
Confidence 44567788888888888885 77643211 1111111278899999999999999999999999999999997 6
Q ss_pred CCcEEEEeCCCCChHHHHhc
Q 024003 236 GWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 236 gv~~i~v~wGy~~~~~l~~a 255 (274)
|+. +++ | +..+++++.
T Consensus 183 g~~-vam--~-na~~~~k~~ 198 (215)
T TIGR01487 183 GFK-VAV--A-NADDQLKEI 198 (215)
T ss_pred CCe-EEc--C-CccHHHHHh
Confidence 644 233 3 334556554
No 143
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=97.59 E-value=5.9e-05 Score=65.54 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=58.2
Q ss_pred CCcHHHHHHHHhhCCCCCCcEEEEcCChh-HHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHH
Q 024003 195 GPKVNVLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 269 (274)
Q Consensus 195 ~pkp~~l~~~l~~l~~~~~~~l~VGDs~~-Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~ 269 (274)
||.|..++.+++.+|++|++++||||-.+ |+-+|++ .||+.|.|..|=-.+.+-..-...|+..++++.+-
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~----~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~A 252 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQA----CGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADA 252 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhh----hcceeEEeeccccCCcccccCCCCcchhhhhHHHH
Confidence 49999999999999999999999999876 6777776 89999999999655534445667788888777653
No 144
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.56 E-value=0.001 Score=59.13 Aligned_cols=82 Identities=17% Similarity=0.092 Sum_probs=56.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHHhCCCCCCceEecC--CCCC------cHHHHHHHHhhC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGL--GTGP------KVNVLKQLQKKP 208 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~---~~~iL~~~~gl~~~f~~v~g~--~~~p------kp~~l~~~l~~l 208 (274)
..++.||+.++++ ++|+++.++|+.++.. +..-|.+ .|+..+ +.++-. +... |.+.-.++.+ -
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~-~ 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLME-E 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHh-C
Confidence 4688999999999 7999999999999777 7777886 888765 555532 2222 3333333332 1
Q ss_pred CCCCCcEEEEcCChhHHHHhh
Q 024003 209 EHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 209 ~~~~~~~l~VGDs~~Di~aA~ 229 (274)
|.. =+..|||...|+.++.
T Consensus 195 GYr--Iv~~iGDq~sDl~G~~ 213 (229)
T TIGR01675 195 GYR--IWGNIGDQWSDLLGSP 213 (229)
T ss_pred Cce--EEEEECCChHHhcCCC
Confidence 211 1478999999997654
No 145
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.56 E-value=0.00012 Score=67.00 Aligned_cols=46 Identities=20% Similarity=0.105 Sum_probs=42.5
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 193 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~ 193 (274)
=|||.|+|+ ++|++++|+|||+++.+..+|++ +|+..+|+.|+|++
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g 198 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGG 198 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECC
Confidence 499999999 79999999999999999999996 99999999888764
No 146
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.48 E-value=0.00032 Score=64.33 Aligned_cols=74 Identities=7% Similarity=0.026 Sum_probs=48.4
Q ss_pred EEEcCCchHHHHHHHHHHhCCC----CCCceEec------------------CCC-C-CcHHHHHHHHhhCCC--CCCcE
Q 024003 162 YIVTSNQSRFVETLLRELAGVT----ITPDRLYG------------------LGT-G-PKVNVLKQLQKKPEH--QGLRL 215 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~----~~f~~v~g------------------~~~-~-pkp~~l~~~l~~l~~--~~~~~ 215 (274)
.+-+..+... +..+++ .|+. ..|-.+.| .+. . +|-..+..+.+.+.- .+-.+
T Consensus 152 ~~w~~~~~~~-~~~~~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~t 229 (302)
T PRK12702 152 FSYSGDPARL-REAFAQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKA 229 (302)
T ss_pred eEecCCHHHH-HHHHHH-cCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceE
Confidence 3336555555 777775 7775 34666666 221 1 666777666665543 34479
Q ss_pred EEEcCChhHHHHhhccCccCCCcEEE
Q 024003 216 HFVEDRLATLKNVIKEPELDGWNLYL 241 (274)
Q Consensus 216 l~VGDs~~Di~aA~~~~~~Agv~~i~ 241 (274)
+-+|||+||+.+=.. +.+++|-
T Consensus 230 iaLGDspND~~mLe~----~D~~vvi 251 (302)
T PRK12702 230 LGIGCSPPDLAFLRW----SEQKVVL 251 (302)
T ss_pred EEecCChhhHHHHHh----CCeeEEe
Confidence 999999999999886 6666654
No 147
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.45 E-value=0.0086 Score=59.03 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=63.8
Q ss_pred ccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-
Q 024003 115 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG- 193 (274)
Q Consensus 115 ~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~- 193 (274)
|++.+++++...++.++|.. ..++|...+.++++|.. +|||..++..++.++++++|++ .|+|.+
T Consensus 89 G~~~~el~~~~r~~l~~f~~---------~~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeL 154 (497)
T PLN02177 89 GLKIRDIELVSRSVLPKFYA---------EDVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTEL 154 (497)
T ss_pred CCCHHHHHHHHHHHHHHHHH---------HhcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEeccc
Confidence 55666665555555555432 23788888888766754 9999999999999997546765 344432
Q ss_pred ------------CCCcH----HHHHHHHhhCCCCCCcEEEEcCChhHHHHhhc
Q 024003 194 ------------TGPKV----NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 194 ------------~~pkp----~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~ 230 (274)
.++++ +-+..+.+.+|.+... +..|||.+|...-.-
T Consensus 155 ev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~ 206 (497)
T PLN02177 155 EVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSI 206 (497)
T ss_pred EECcCCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHh
Confidence 11211 2233333445544333 899999999988764
No 148
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.44 E-value=0.0023 Score=57.30 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=36.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChH
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 250 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~ 250 (274)
.|-..+.++++++++++++++.+|||.||+.+=. .+.+.|.| |-..++
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~-----~~~~~vvV--~Na~~e 212 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLE-----GGDHGVVV--GNAQPE 212 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHC-----CSSEEEE---TTS-HH
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHc-----CcCCEEEE--cCCCHH
Confidence 6889999999999999999999999999999875 45666666 534443
No 149
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.39 E-value=0.0019 Score=52.35 Aligned_cols=116 Identities=10% Similarity=0.254 Sum_probs=79.7
Q ss_pred CCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 141 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 141 ~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
....++|+.|.|++. +. +.+.|+|.-...+...+.+ ..|+.- +.|..+ .+|+.=..+++.|+-+-+.++|
T Consensus 26 atgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae-~~gi~~--~rv~a~---a~~e~K~~ii~eLkk~~~k~vm 98 (152)
T COG4087 26 ATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAE-FVGIPV--ERVFAG---ADPEMKAKIIRELKKRYEKVVM 98 (152)
T ss_pred ccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHH-HcCCce--eeeecc---cCHHHHHHHHHHhcCCCcEEEE
Confidence 445689999999999 56 9999999999999999999 488753 455432 3455555566666666688999
Q ss_pred EcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 218 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 218 VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
|||..||+.+-++ |.+-.+-+.-+ +-++.+.. .+ |+++.++.++-.
T Consensus 99 VGnGaND~laLr~----ADlGI~tiq~e-~v~~r~l~-~A--Dvvik~i~e~ld 144 (152)
T COG4087 99 VGNGANDILALRE----ADLGICTIQQE-GVPERLLL-TA--DVVLKEIAEILD 144 (152)
T ss_pred ecCCcchHHHhhh----cccceEEeccC-CcchHHHh-hc--hhhhhhHHHHHH
Confidence 9999999999998 44443333322 22222222 12 377776666533
No 150
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.37 E-value=0.00028 Score=62.89 Aligned_cols=70 Identities=13% Similarity=0.126 Sum_probs=53.6
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccC---ccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP---ELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~---~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
.|...+..++++++..+.+++||||+.+|+.+.+.+. ..-|..++.|.+|-. ....++++.+++++...
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~--------~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSK--------KTVAKFHLTGPQQVLEF 238 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCc--------CCCceEeCCCHHHHHHH
Confidence 5679999999999999999999999999999999720 001667888886721 12245899999988765
Q ss_pred c
Q 024003 273 L 273 (274)
Q Consensus 273 ~ 273 (274)
|
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
No 151
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.29 E-value=0.002 Score=65.25 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=35.7
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEE--cCChhHHHHhhccCccCCCcEE
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFV--EDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~V--GDs~~Di~aA~~~~~~Agv~~i 240 (274)
.|-..+..+++.+++..++++.| ||+.||+.+=+. ||.+++
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~----Ag~gVA 655 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLET----VDSPIL 655 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHh----CCceEE
Confidence 78899999999999988888888 999999999986 776543
No 152
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.27 E-value=0.0017 Score=58.96 Aligned_cols=81 Identities=15% Similarity=0.157 Sum_probs=51.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHHhCCCCCCceEec--C-CCCC------cHHHHHHHHhh
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYG--L-GTGP------KVNVLKQLQKK 207 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~---~~~~iL~~~~gl~~~f~~v~g--~-~~~p------kp~~l~~~l~~ 207 (274)
..++.||+.++++ ++|+++.++||.++. .+..-|.+ .|...+ +.++= . +..+ |.+.-.++.+
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~- 219 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQ- 219 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHH-
Confidence 4678899999999 799999999999864 45566664 677544 43432 2 1112 2222233222
Q ss_pred CCCCCCcEEEEcCChhHHHHh
Q 024003 208 PEHQGLRLHFVEDRLATLKNV 228 (274)
Q Consensus 208 l~~~~~~~l~VGDs~~Di~aA 228 (274)
-|.. =+..|||..+|+.+.
T Consensus 220 eGYr--Iv~~iGDq~sDl~G~ 238 (275)
T TIGR01680 220 EGYN--IVGIIGDQWNDLKGE 238 (275)
T ss_pred cCce--EEEEECCCHHhccCC
Confidence 2221 147899999999654
No 153
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.21 E-value=0.0017 Score=57.71 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=60.6
Q ss_pred hCCCcEEEEcCCch-----HHHHHHHHHHhCCCCCCceEecCC-------C-CCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024003 156 LASSRIYIVTSNQS-----RFVETLLRELAGVTITPDRLYGLG-------T-GPKVNVLKQLQKKPEHQGLRLHFVEDRL 222 (274)
Q Consensus 156 ~~g~~laIvTnK~~-----~~~~~iL~~~~gl~~~f~~v~g~~-------~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 222 (274)
+.-+++.+.+.+.. ......+.+ +|+. +..++++. . .+|...+..+++.+|++++++++|||+.
T Consensus 117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ 193 (249)
T TIGR01485 117 QRPHKVSFFLDPEAAPEVIKQLTEMLKE-TGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG 193 (249)
T ss_pred cCCeeEEEEechhhhhHHHHHHHHHHHh-cCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh
Confidence 34567777665432 222444453 4543 23444331 1 2999999999999999999999999999
Q ss_pred hHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 223 ATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 223 ~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
||+.+.+. ++..+++|. +..+++++
T Consensus 194 ND~~ml~~----~~~~~va~~---na~~~~k~ 218 (249)
T TIGR01485 194 NDIELFEI----GSVRGVIVS---NAQEELLQ 218 (249)
T ss_pred hHHHHHHc----cCCcEEEEC---CCHHHHHH
Confidence 99999996 577788883 34455554
No 154
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.18 E-value=0.0019 Score=55.09 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=63.9
Q ss_pred cccCCCCCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHHhCCCCCCceEecCCCCCcHHHH--HHHHhhCC
Q 024003 138 TTWIGANRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGTGPKVNVL--KQLQKKPE 209 (274)
Q Consensus 138 ~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~---~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l--~~~l~~l~ 209 (274)
.+|...+-|-.=+.++++ ++|-++..+|+.... .+-+.|++.|.|...-..++.++ ||+|.-. .+.+++-+
T Consensus 107 ~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-k~k~~qy~Kt~~i~~~~ 185 (237)
T COG3700 107 NGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-KPKPGQYTKTQWIQDKN 185 (237)
T ss_pred cCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-CCCcccccccHHHHhcC
Confidence 345556667777778887 799999999976543 23344444588877766666655 3444322 22344455
Q ss_pred CCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 210 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 210 ~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
+. |+-|||.+||.+|+. ||++-|-.
T Consensus 186 ~~----IhYGDSD~Di~AAke----aG~RgIRi 210 (237)
T COG3700 186 IR----IHYGDSDNDITAAKE----AGARGIRI 210 (237)
T ss_pred ce----EEecCCchhhhHHHh----cCccceeE
Confidence 54 899999999999998 55555544
No 155
>PLN02423 phosphomannomutase
Probab=97.18 E-value=0.0013 Score=58.76 Aligned_cols=68 Identities=16% Similarity=0.062 Sum_probs=45.6
Q ss_pred cCCchHHHHHHHHHHhCCCCCCceEecCC-------CC-CcHHHHHHHHhhCCCCCCcEEEEcC----ChhHHHHhhccC
Q 024003 165 TSNQSRFVETLLRELAGVTITPDRLYGLG-------TG-PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEP 232 (274)
Q Consensus 165 TnK~~~~~~~iL~~~~gl~~~f~~v~g~~-------~~-pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~ 232 (274)
+.+.......+.++ ++- -.+....++. .+ .|...|.+++ ++++++.+|| +.||+++-+.
T Consensus 152 ~~~~~~~~~~l~~~-~~~-~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~-- 222 (245)
T PLN02423 152 HNIRPKMVSVLREK-FAH-LNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFES-- 222 (245)
T ss_pred chHHHHHHHHHHHh-CCC-CcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhC--
Confidence 44555556666664 531 1233333331 12 7777777776 8999999999 7999999984
Q ss_pred ccCCCcEEEEe
Q 024003 233 ELDGWNLYLVD 243 (274)
Q Consensus 233 ~~Agv~~i~v~ 243 (274)
-|+.++.|+
T Consensus 223 --~~~~~~~~~ 231 (245)
T PLN02423 223 --ERTIGHTVT 231 (245)
T ss_pred --CCcceEEeC
Confidence 499999994
No 156
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.14 E-value=0.0024 Score=62.05 Aligned_cols=94 Identities=18% Similarity=0.266 Sum_probs=66.2
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCC--------CCCCceEecCCCCC-------------------
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGV--------TITPDRLYGLGTGP------------------- 196 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl--------~~~f~~v~g~~~~p------------------- 196 (274)
=|.+..+|+ ++|.++.++||.+-.+++.+++..+|- ..+||.|+....||
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 478888888 789999999999999999999964544 46999999643221
Q ss_pred ---c---H---------HHHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEe
Q 024003 197 ---K---V---------NVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 197 ---k---p---------~~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~ 243 (274)
+ + --+..+++.+|....+++||||+. .||...+. ..|.++++|-
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~---~~gWrT~~Ii 324 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKK---RHGWRTAAII 324 (448)
T ss_dssp ECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHH---HH-SEEEEE-
T ss_pred ccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhcc---ccceEEEEEe
Confidence 1 0 125566777888889999999987 69999988 3799999993
No 157
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.02 E-value=0.00095 Score=58.80 Aligned_cols=93 Identities=12% Similarity=-0.019 Sum_probs=60.3
Q ss_pred CCCcEEEEcCCch----HHHHHHHHHHhCCCCCCceEecC----C---C-CCcHHHHHHHHhhCCCCCCcEEEEcCChhH
Q 024003 157 ASSRIYIVTSNQS----RFVETLLRELAGVTITPDRLYGL----G---T-GPKVNVLKQLQKKPEHQGLRLHFVEDRLAT 224 (274)
Q Consensus 157 ~g~~laIvTnK~~----~~~~~iL~~~~gl~~~f~~v~g~----~---~-~pkp~~l~~~l~~l~~~~~~~l~VGDs~~D 224 (274)
..+++.+.+.... ......+++ ++.. +..++++ + . .+|+..+..+++++|++++++++|||+.||
T Consensus 111 ~~~~i~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD 187 (236)
T TIGR02471 111 GPFKISYLLDPEGEPILPQIRQRLRQ-QSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGND 187 (236)
T ss_pred CCeeEEEEECcccchHHHHHHHHHHh-ccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccH
Confidence 3466776654321 223445553 4432 3344443 1 1 299999999999999999999999999999
Q ss_pred HHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCC
Q 024003 225 LKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPR 260 (274)
Q Consensus 225 i~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~ 260 (274)
+.+.+. +| +++.+|- ..+++++....|.
T Consensus 188 ~~ml~~----~~---~~iav~n-a~~~~k~~a~~~~ 215 (236)
T TIGR02471 188 EEMLRG----LT---LGVVVGN-HDPELEGLRHQQR 215 (236)
T ss_pred HHHHcC----CC---cEEEEcC-CcHHHHHhhcCCc
Confidence 999986 55 3444554 3455666544454
No 158
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.76 E-value=0.0072 Score=61.62 Aligned_cols=89 Identities=15% Similarity=0.174 Sum_probs=65.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
++-||+.+.++ +.|+++.++|.-....+..+-++ .|++.+|..+ .+.-|-+.+... +-..+-+.|+||.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~A~~---~PedK~~iV~~l----Q~~G~~VaMtGDG 512 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFVAEC---KPEDKINVIREE----QAKGHIVAMTGDG 512 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEEcCC---CHHHHHHHHHHH----HhCCCEEEEECCC
Confidence 67799999999 78999999999999999999997 9997543221 111344444443 3234568999999
Q ss_pred hhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 222 LATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 222 ~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
.||.-+=++ |. ||+.-|-++
T Consensus 513 vNDAPALa~----AD---VGIAMgsGT 532 (673)
T PRK14010 513 TNDAPALAE----AN---VGLAMNSGT 532 (673)
T ss_pred hhhHHHHHh----CC---EEEEeCCCC
Confidence 999988776 44 788888443
No 159
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.70 E-value=0.0064 Score=61.99 Aligned_cols=88 Identities=15% Similarity=0.161 Sum_probs=67.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
++-||+.+.++ ++|+++.++|.-....+..+-++ .|++.+ +..- +.-|-+.+....++ ...+.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v----~a~~~PedK~~~v~~lq~~----g~~VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDF----IAEATPEDKIALIRQEQAE----GKLVAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEE----EcCCCHHHHHHHHHHHHHc----CCeEEEECC
Confidence 67799999999 79999999999999999999997 999643 3322 12355666655442 346999999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
..||.-+=+. |+ +|+..|-++
T Consensus 517 G~NDapAL~~----Ad---vGiAm~~gt 537 (675)
T TIGR01497 517 GTNDAPALAQ----AD---VGVAMNSGT 537 (675)
T ss_pred CcchHHHHHh----CC---EeEEeCCCC
Confidence 9999999887 55 667777444
No 160
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.66 E-value=0.002 Score=55.24 Aligned_cols=40 Identities=15% Similarity=0.028 Sum_probs=36.8
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
+|+..+.+++++++++++++++|||+.+|+.+.+. +|+.+
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~----~~~~v 202 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMFEV----AGLAV 202 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH----cCCce
Confidence 89999999999999999999999999999999997 66554
No 161
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.62 E-value=0.0077 Score=61.47 Aligned_cols=88 Identities=17% Similarity=0.221 Sum_probs=66.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-CCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
++-||+.|.++ ++|+++.++|.-....++.+-++ .|++. ++..-. .-|.+.+....+ ..+-+.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~----v~A~~~PedK~~iV~~lQ~----~G~~VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD----FLAEATPEDKLALIRQEQA----EGRLVAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE----EEccCCHHHHHHHHHHHHH----cCCeEEEECC
Confidence 56799999998 79999999999999999999997 99964 343221 134455554432 3355899999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
..||.-+=++ |. ||+.-|-++
T Consensus 516 GvNDAPALa~----AD---VGIAMgsGT 536 (679)
T PRK01122 516 GTNDAPALAQ----AD---VGVAMNSGT 536 (679)
T ss_pred CcchHHHHHh----CC---EeEEeCCCC
Confidence 9999988776 43 788888444
No 162
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.44 E-value=0.025 Score=50.44 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=57.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH----HHHHHHHHhCCCCCC-ce-EecCCCCCcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRF----VETLLRELAGVTITP-DR-LYGLGTGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~----~~~iL~~~~gl~~~f-~~-v~g~~~~pkp~~l~~~l~~l~~~~~ 213 (274)
.+++-||+.|+|. +.|.++.-+||..++. +..-|++ +|+...- +. ++=.+.++|..-...+-+-+ .
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~----~ 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDY----K 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhcc----c
Confidence 4689999999999 8999999999988776 6677775 7886422 22 22223346665555544423 3
Q ss_pred cEEEEcCChhHHHHhh
Q 024003 214 RLHFVEDRLATLKNVI 229 (274)
Q Consensus 214 ~~l~VGDs~~Di~aA~ 229 (274)
-+++|||...|.-...
T Consensus 195 iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 195 IVMLVGDNLDDFGDNA 210 (274)
T ss_pred eeeEecCchhhhcchh
Confidence 4699999999976543
No 163
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.26 E-value=0.018 Score=59.12 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=76.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
-++-|+..+.++ ++|+++.++|.-.+..++.+-++ +|++.++..+. +.-|.+.+.++.+ ....+.||||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Aell---PedK~~~V~~l~~----~g~~VamVGD 607 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAELL---PEDKAEIVRELQA----EGRKVAMVGD 607 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhheccCC---cHHHHHHHHHHHh----cCCEEEEEeC
Confidence 467899999998 89999999999999999999997 99965433221 2246666666543 2367999999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec--hhHHH
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSDFC 270 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~--~~~~~ 270 (274)
..||.-+=.. | -||+.-|-++.-..+.+ | +++.+ +.++.
T Consensus 608 GINDAPALA~----A---dVGiAmG~GtDvA~eaA--D--vvL~~~dL~~v~ 648 (713)
T COG2217 608 GINDAPALAA----A---DVGIAMGSGTDVAIEAA--D--VVLMRDDLSAVP 648 (713)
T ss_pred CchhHHHHhh----c---CeeEeecCCcHHHHHhC--C--EEEecCCHHHHH
Confidence 9999877654 3 27787787654444443 3 55544 55553
No 164
>PTZ00174 phosphomannomutase; Provisional
Probab=96.12 E-value=0.0026 Score=56.69 Aligned_cols=40 Identities=18% Similarity=0.047 Sum_probs=33.2
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcC----ChhHHHHhhccCccCCCcEEEEe
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGD----s~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
.|...+..+++. +++++.+|| +.||+.+=+. ++...++|.
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~----~~~~g~~v~ 231 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYND----PRTIGHSVK 231 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhc----CCCceEEeC
Confidence 788899999887 589999999 8999999986 556556664
No 165
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.92 E-value=0.026 Score=43.57 Aligned_cols=71 Identities=18% Similarity=0.327 Sum_probs=44.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch----HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQS----RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~----~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
...++||+.|+|+ ++|+++.++||.+. .++++ |+. +|+..-.+.|+.+ .......+++. .....+
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~-L~~-~Gi~~~~~~i~ts-----~~~~~~~l~~~-~~~~~v 83 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKK-LKK-LGIPVDEDEIITS-----GMAAAEYLKEH-KGGKKV 83 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHH-HHH-TTTT--GGGEEEH-----HHHHHHHHHHH-TTSSEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHH-HHh-cCcCCCcCEEECh-----HHHHHHHHHhc-CCCCEE
Confidence 3579999999999 79999999999873 33433 364 8887555666642 33444444442 234567
Q ss_pred EEEcCC
Q 024003 216 HFVEDR 221 (274)
Q Consensus 216 l~VGDs 221 (274)
.+||-.
T Consensus 84 ~vlG~~ 89 (101)
T PF13344_consen 84 YVLGSD 89 (101)
T ss_dssp EEES-H
T ss_pred EEEcCH
Confidence 777754
No 166
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.86 E-value=0.035 Score=58.39 Aligned_cols=109 Identities=16% Similarity=0.167 Sum_probs=70.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-------------------CCcHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------------GPKVNVL 201 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-------------------~pkp~~l 201 (274)
.+|-|++.+.++ ++|+++.++|+-....+..+-++ .|+..- +.+.|.+- .-.|+-=
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 467899999999 79999999999999999999997 999621 22333220 0122221
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
.++.+.+.-..+.+.|+||+.||.-+=++ |+ ||+.-|-+ .+.....++ +++.+
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvNDapALk~----Ad---VGIAmg~g--tdvAk~aAD--iVLld 644 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGINDAPALRK----AD---VGISVDTA--ADIAKEASD--IILLE 644 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCcccHHHHHh----CC---EEEEeCCc--cHHHHHhCC--EEEec
Confidence 22222222233568999999999998887 54 56666633 334333344 66643
No 167
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.84 E-value=0.042 Score=56.96 Aligned_cols=106 Identities=12% Similarity=0.115 Sum_probs=69.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC---ce-----------------------EecCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DR-----------------------LYGLGT 194 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f---~~-----------------------v~g~~~ 194 (274)
.++-|++.+.++ ++|+++.++|+-....++.+-++ .|+.... +. |++.-.
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~ 519 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVF 519 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecC
Confidence 367899999998 79999999999999999999997 9996410 00 222111
Q ss_pred -CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 195 -GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 195 -~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
.-|.+++.. ++ -..+-+.|+||+.||.-+=++ |. ||+.-|-+ .+.....++ +++.+
T Consensus 520 Pe~K~~iV~~-lq---~~G~~VamvGDGvNDapAL~~----Ad---VGIAm~~g--tdvAkeaAD--ivLl~ 576 (755)
T TIGR01647 520 PEHKYEIVEI-LQ---KRGHLVGMTGDGVNDAPALKK----AD---VGIAVAGA--TDAARSAAD--IVLTE 576 (755)
T ss_pred HHHHHHHHHH-HH---hcCCEEEEEcCCcccHHHHHh----CC---eeEEecCC--cHHHHHhCC--EEEEc
Confidence 022333333 33 334669999999999988886 54 45555623 334333334 66543
No 168
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.84 E-value=0.043 Score=57.98 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=70.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-C------------------CCcHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T------------------GPKVNVL 201 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~------------------~pkp~~l 201 (274)
.+|-|++.+.++ ++|+++.++|+-....+..+-++ .|+..- ..+-|.+ . .-.|+-=
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~-~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPG-EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCC-CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 367799999998 79999999999999999999997 999521 1222222 0 0123322
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL 264 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~ 264 (274)
.++.+.+.-..+-+.|+||+.||.-|=++ |. ||+.-|-+ .+.....++ +++.
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~----AD---VGIAmg~g--tdvAkeaAD--iVLl 678 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRD----AD---VGISVDSG--ADIAKESAD--IILL 678 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHh----CC---EEEEeCcc--cHHHHHhcC--EEEe
Confidence 22222222234568999999999998887 44 56666623 344444444 6664
No 169
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=95.83 E-value=0.058 Score=48.59 Aligned_cols=101 Identities=19% Similarity=0.303 Sum_probs=71.5
Q ss_pred CccHHHHHHhCCCcEEEEcCCchHHHHH---HHHHHhCCCCCCce-----E-----e-c-CC------------CC-CcH
Q 024003 147 YPGVSDALKLASSRIYIVTSNQSRFVET---LLRELAGVTITPDR-----L-----Y-G-LG------------TG-PKV 198 (274)
Q Consensus 147 ypGv~e~L~~~g~~laIvTnK~~~~~~~---iL~~~~gl~~~f~~-----v-----~-g-~~------------~~-pkp 198 (274)
+|.+.+-|.++|+++..+|..+..+... -|++ +|++.--.. . . . .. .+ +|-
T Consensus 86 ~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG 164 (252)
T PF11019_consen 86 VPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKG 164 (252)
T ss_pred HHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccH
Confidence 3444444448999999999988765544 4554 677521111 0 0 1 11 11 788
Q ss_pred HHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 199 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 199 ~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
++|..++.+.|..|+.+|||.|+...+....++-...||.++|..|....
T Consensus 165 ~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~~ 214 (252)
T PF11019_consen 165 EVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGAE 214 (252)
T ss_pred HHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcchh
Confidence 99999999999999999999999988876555333589999999998643
No 170
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.71 E-value=0.078 Score=48.05 Aligned_cols=72 Identities=17% Similarity=0.264 Sum_probs=50.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEE
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~---~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+|||+.|+|+ ++|++++++||.+ ......-|++ +|+....+.|+. ........+++....+..+++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~t-----s~~~~~~~l~~~~~~~~~v~~ 90 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFS-----SALCAARLLRQPPDAPKAVYV 90 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEec-----HHHHHHHHHHhhCcCCCEEEE
Confidence 468999999998 7899999999954 4344455675 888655555554 234555556654444567899
Q ss_pred EcCC
Q 024003 218 VEDR 221 (274)
Q Consensus 218 VGDs 221 (274)
||+.
T Consensus 91 iG~~ 94 (279)
T TIGR01452 91 IGEE 94 (279)
T ss_pred EcCH
Confidence 9985
No 171
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.69 E-value=0.046 Score=57.77 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=70.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-------------------CCcHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-------------------GPKVNVL 201 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-------------------~pkp~~l 201 (274)
.+|-|++.+.++ ++|+++.++|+-....+..+-++ .|+..- ..+.|.+- .-.|+-=
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~-~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAG-EVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCcc-CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 367789999998 79999999999999999999997 999521 22223220 0123221
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
.++.+.+.-...-+.|+||+.||.-|=++ |. ||+.-|-++ +.....++ +++.+
T Consensus 627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~----AD---VGIAmg~gt--dvAkeaAD--iVLld 679 (902)
T PRK10517 627 ERIVTLLKREGHVVGFMGDGINDAPALRA----AD---IGISVDGAV--DIAREAAD--IILLE 679 (902)
T ss_pred HHHHHHHHHCCCEEEEECCCcchHHHHHh----CC---EEEEeCCcC--HHHHHhCC--EEEec
Confidence 22222222234568999999999998887 44 667777333 34443444 66643
No 172
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=95.39 E-value=0.064 Score=47.13 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=22.2
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEec
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 191 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g 191 (274)
++|++++|+|+++...++.+++. +++. .++.++|
T Consensus 28 ~~gi~~viaTGR~~~~v~~~~~~-l~l~-~~~~~I~ 61 (236)
T TIGR02471 28 GDAVGFGIATGRSVESAKSRYAK-LNLP-SPDVLIA 61 (236)
T ss_pred CCCceEEEEeCCCHHHHHHHHHh-CCCC-CCCEEEE
Confidence 46677777777777777777775 6664 2344444
No 173
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=95.30 E-value=0.11 Score=55.78 Aligned_cols=116 Identities=11% Similarity=0.058 Sum_probs=73.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC----------CceEecC-CC---------------
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT----------PDRLYGL-GT--------------- 194 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~----------f~~v~g~-~~--------------- 194 (274)
.++-|++.++++ ++|+++.++|+-....+..+-++ .|+... -..++.+ +-
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 367899999999 89999999999999999999997 999531 0123322 10
Q ss_pred ----CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeec--hhH
Q 024003 195 ----GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQ--LSD 268 (274)
Q Consensus 195 ----~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~--~~~ 268 (274)
.-.|+-=..+.+.+.-..+-+.|+||+.||.-+=+. |+ ||+.-|.+..+ .....++ +++.+ +..
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~----Ad---VGIAmg~~gt~-vak~aAD--ivl~dd~f~~ 793 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKM----AN---VGIAMGINGSD-VAKDASD--IVLSDDNFAS 793 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHh----CC---ccEecCCCccH-HHHHhcC--EEEecCCHHH
Confidence 012221112222222234568999999999998886 54 56666754333 3222233 66654 554
Q ss_pred HH
Q 024003 269 FC 270 (274)
Q Consensus 269 ~~ 270 (274)
+.
T Consensus 794 I~ 795 (1053)
T TIGR01523 794 IL 795 (1053)
T ss_pred HH
Confidence 43
No 174
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.29 E-value=0.11 Score=55.06 Aligned_cols=112 Identities=21% Similarity=0.218 Sum_probs=74.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc-----------------------eEecCCC-CCc
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD-----------------------RLYGLGT-GPK 197 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~-----------------------~v~g~~~-~pk 197 (274)
++-|++.++++ ++|+++.++|+-....+..+-++ .|+...-. .|++.-+ .-|
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 77899999999 79999999999999999999997 99963211 2333211 133
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceee--chhHHHh
Q 024003 198 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLL--QLSDFCT 271 (274)
Q Consensus 198 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~--~~~~~~~ 271 (274)
-+++.. +++. .+-+.|+||+.||.-|=++ |. ||+.-|-+. .+.....+ |+++. ++..+..
T Consensus 658 ~~iV~~-lq~~---g~vVam~GDGvNDapALk~----Ad---VGIAmg~~g-tdvAk~aA--DivL~dd~f~~I~~ 719 (941)
T TIGR01517 658 QLLVLM-LKDM---GEVVAVTGDGTNDAPALKL----AD---VGFSMGISG-TEVAKEAS--DIILLDDNFASIVR 719 (941)
T ss_pred HHHHHH-HHHC---CCEEEEECCCCchHHHHHh----CC---cceecCCCc-cHHHHHhC--CEEEecCCHHHHHH
Confidence 344443 3333 3468999999999999887 44 566667322 23333333 47776 5555543
No 175
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=95.23 E-value=0.011 Score=51.22 Aligned_cols=29 Identities=28% Similarity=0.413 Sum_probs=23.4
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
|+|+|||||||+|+-..+......+++.+
T Consensus 2 k~v~~DlDGTLl~~~~~i~~~~~~~i~~l 30 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRMISERAIEAIRKA 30 (215)
T ss_pred cEEEEecCCCcCCCCcccCHHHHHHHHHH
Confidence 78999999999998666666666676666
No 176
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.83 E-value=0.011 Score=48.67 Aligned_cols=81 Identities=16% Similarity=0.064 Sum_probs=56.9
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCC-CCCCceEecCCCC---CcHHHHHHHHhhCCCCCCcEEE
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG---PKVNVLKQLQKKPEHQGLRLHF 217 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl-~~~f~~v~g~~~~---pkp~~l~~~l~~l~~~~~~~l~ 217 (274)
..+-||+.++|+ .+.+.++|.|+..+.+++.+++. +.- ..+|+.++..+.. .+.. .+-++.+|-+.+++|+
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~--~KdL~~l~~~~~~vvi 111 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY--IKDLSKLGRDLDNVVI 111 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE--E--GGGSSS-GGGEEE
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc--ccchHHHhhccccEEE
Confidence 356799999999 77899999999999999999996 776 4678888865421 1111 1456677778899999
Q ss_pred EcCChhHHHH
Q 024003 218 VEDRLATLKN 227 (274)
Q Consensus 218 VGDs~~Di~a 227 (274)
|.|++.-...
T Consensus 112 vDD~~~~~~~ 121 (159)
T PF03031_consen 112 VDDSPRKWAL 121 (159)
T ss_dssp EES-GGGGTT
T ss_pred EeCCHHHeec
Confidence 9999886543
No 177
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=94.79 E-value=0.029 Score=48.45 Aligned_cols=52 Identities=17% Similarity=0.112 Sum_probs=41.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
.|-..+..+++.+|+++++++.|||+.||+.+-+. +|.. ++| |..+ +++++.
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~----~~~~-~am--~na~-~~~k~~ 237 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLEL----AGYS-VAM--GNAT-PELKKA 237 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHH----SSEE-EEE--TTS--HHHHHH
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHHhh----cCeE-EEE--cCCC-HHHHHh
Confidence 78899999999999999999999999999999997 5533 344 5444 455543
No 178
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=94.76 E-value=0.017 Score=46.64 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=12.9
Q ss_pred CceEEEecCcccccC
Q 024003 2 EDLYALDFDGVICDS 16 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS 16 (274)
-|+|+||+||||+++
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 079999999999974
No 179
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.58 E-value=0.23 Score=53.15 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=34.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
+|-|++.+.++ ++|+++.++|+-....+..+.++ .|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 67899999999 89999999999999999999997 9984
No 180
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.28 E-value=0.051 Score=43.55 Aligned_cols=14 Identities=14% Similarity=0.422 Sum_probs=13.1
Q ss_pred ceEEEecCcccccC
Q 024003 3 DLYALDFDGVICDS 16 (274)
Q Consensus 3 ~~ilFDlDGTLvDS 16 (274)
|+++|||||||.+.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 68999999999998
No 181
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=94.13 E-value=0.33 Score=43.08 Aligned_cols=103 Identities=18% Similarity=0.196 Sum_probs=74.4
Q ss_pred HHhhhhcccCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhC-------CCCCCceEecCCCCCcHHHH
Q 024003 132 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVL 201 (274)
Q Consensus 132 ~~~~y~~~~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~g-------l~~~f~~v~g~~~~pkp~~l 201 (274)
|..-|...-+ ....|+.|...++ .+|++++|-|+-+...-+.+.. |.+ ++.|||.-+|. |--....
T Consensus 111 w~~gy~sg~l-k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg-~s~~gdl~~y~~gyfDt~iG~--K~e~~sy 186 (254)
T KOG2630|consen 111 WAAGYESGEL-KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFG-YSDAGDLRKYISGYFDTTIGL--KVESQSY 186 (254)
T ss_pred HHhhcccccc-cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHc-ccCcchHHHHhhhhhhccccc--eehhHHH
Confidence 3344444433 3489999999999 7999999988777655444433 222 23467766653 2345678
Q ss_pred HHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEE
Q 024003 202 KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 202 ~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v 242 (274)
..+.+.+|.++.+.+|.=|-..-..+|+. +|+.+..+
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~----aGl~a~l~ 223 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVPREAAAARK----AGLQAGLV 223 (254)
T ss_pred HHHHHHhCCChhheEEeccChHHHHHHHh----cccceeee
Confidence 88999999999999999999999999997 67666554
No 182
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=94.08 E-value=0.52 Score=46.40 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=29.5
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC
Q 024003 150 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 193 (274)
Q Consensus 150 v~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~ 193 (274)
..+...++| +.+|+|.-|+-.++..++.++|. |.|+|.+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTE 139 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSE 139 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeee
Confidence 344444677 99999999999999999975665 5666653
No 183
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.78 E-value=0.27 Score=48.32 Aligned_cols=75 Identities=17% Similarity=0.294 Sum_probs=57.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~-~~pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
.++.|++.++++ ++|+++.++|......+..+-++ .|+ ++.- +.-|.+.+....+ ....+.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~~----~g~~v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQK----KGRVVAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHHH----CCCEEEEEC
Confidence 478899999998 79999999999999999999996 886 2211 1134445554422 236799999
Q ss_pred CChhHHHHhhc
Q 024003 220 DRLATLKNVIK 230 (274)
Q Consensus 220 Ds~~Di~aA~~ 230 (274)
|..||..+-+.
T Consensus 414 Dg~nD~~al~~ 424 (499)
T TIGR01494 414 DGVNDAPALKK 424 (499)
T ss_pred CChhhHHHHHh
Confidence 99999988876
No 184
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=93.74 E-value=0.3 Score=52.56 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=33.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
-+|-|||.|+++ ++|+++.++|+-..+.|..+-.+ .|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 478899999999 89999999999888888888765 6663
No 185
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.56 E-value=0.39 Score=50.09 Aligned_cols=94 Identities=15% Similarity=0.216 Sum_probs=68.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC-CCcHHHHHHHHhhCCCCCCcEEEEcC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLHFVED 220 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~-~pkp~~l~~~l~~l~~~~~~~l~VGD 220 (274)
++-|++...+. +.|++++++|+-....++.+-++ .| ++.|++.-. .-|.+.+.++.++ ...+.||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~----~~~VaMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKN----GGPVAMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhc----CCcEEEEeC
Confidence 56677777666 89999999999999999999997 88 567776432 2567777777653 356899999
Q ss_pred ChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 221 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
..||--+=.. | .+|+.=|-++.-..+.
T Consensus 794 GINDaPALA~----A---dVGIaig~gs~vAiea 820 (951)
T KOG0207|consen 794 GINDAPALAQ----A---DVGIAIGAGSDVAIEA 820 (951)
T ss_pred CCCccHHHHh----h---ccceeeccccHHHHhh
Confidence 9999765433 2 3777777775443443
No 186
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=93.28 E-value=0.16 Score=45.73 Aligned_cols=48 Identities=25% Similarity=0.126 Sum_probs=40.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 192 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~ 192 (274)
...+|++.++|+ ++|++++|||+++...+..++++ +|+..++-...|+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~i~~nGa 70 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPFIVENGA 70 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCEEEEcCc
Confidence 356788888888 79999999999999999999996 9998776655554
No 187
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=93.00 E-value=0.33 Score=41.11 Aligned_cols=87 Identities=20% Similarity=0.219 Sum_probs=58.5
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCC-CCCCce--EecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024003 148 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDR--LYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 222 (274)
Q Consensus 148 pGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl-~~~f~~--v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 222 (274)
.+|...|. ++.-+++-+|+....+++..=.- |-. ...++. ++|.. .|. .+.+...++ +|+.|+.
T Consensus 75 q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h--~KV----~~vrth~id----lf~ed~~ 143 (194)
T COG5663 75 QLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLH--HKV----EAVRTHNID----LFFEDSH 143 (194)
T ss_pred HHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhccc--ccc----hhhHhhccC----ccccccC
Confidence 56777777 67778999999988887765442 322 223443 33433 222 255667777 9999986
Q ss_pred h-HHHHhhccCccCCCcEEEEeCCCCCh
Q 024003 223 A-TLKNVIKEPELDGWNLYLVDWGYNTP 249 (274)
Q Consensus 223 ~-Di~aA~~~~~~Agv~~i~v~wGy~~~ 249 (274)
- -++.|++ +|+|++...--|+..
T Consensus 144 ~na~~iAk~----~~~~vilins~ynRk 167 (194)
T COG5663 144 DNAGQIAKN----AGIPVILINSPYNRK 167 (194)
T ss_pred chHHHHHHh----cCCcEEEecCccccc
Confidence 4 4566665 999999999888754
No 188
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.80 E-value=0.05 Score=46.48 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=19.1
Q ss_pred eEEEecCcccccCH-HHHHHHHHHHHHHh
Q 024003 4 LYALDFDGVICDSC-EETALSAVKAARVR 31 (274)
Q Consensus 4 ~ilFDlDGTLvDS~-~di~~a~n~a~~~~ 31 (274)
+|+||+||||+++- ..+...+..+++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l 29 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERL 29 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHH
Confidence 48999999999874 33444455555555
No 189
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=92.57 E-value=0.53 Score=42.89 Aligned_cols=50 Identities=36% Similarity=0.543 Sum_probs=36.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHH---HHHHHhCCCCCCceEecC
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVET---LLRELAGVTITPDRLYGL 192 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~---iL~~~~gl~~~f~~v~g~ 192 (274)
..++|||+.|.|+ ++|+++.++||.+.+..+. -|+.+.+++-..+.|+.+
T Consensus 22 G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS 77 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS 77 (269)
T ss_pred CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH
Confidence 4689999999999 8999999999987665442 233225565666777764
No 190
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=92.40 E-value=0.052 Score=44.67 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.5
Q ss_pred ceEEEecCcccccCHH
Q 024003 3 DLYALDFDGVICDSCE 18 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~ 18 (274)
|+++|||||||+++..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 5899999999999876
No 191
>PLN03190 aminophospholipid translocase; Provisional
Probab=92.31 E-value=0.46 Score=51.73 Aligned_cols=33 Identities=18% Similarity=0.438 Sum_probs=27.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLL 176 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL 176 (274)
.+|=||+.++++ ++|+++.++|+-..+.+..+-
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA 760 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIG 760 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
Confidence 478899999999 799999999997766665553
No 192
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=92.31 E-value=0.95 Score=40.36 Aligned_cols=38 Identities=13% Similarity=0.390 Sum_probs=33.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCC
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV 182 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl 182 (274)
.++-||+.|+++ ++-++=.|+|+.-+.+++++.. +.|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~-~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTAS-MIGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHH-hcCC
Confidence 578999999999 6777889999999999999988 4777
No 193
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=92.30 E-value=0.078 Score=48.80 Aligned_cols=29 Identities=10% Similarity=0.102 Sum_probs=21.6
Q ss_pred ceEEEecCcccccCHHHH---HHHHHHHHHHh
Q 024003 3 DLYALDFDGVICDSCEET---ALSAVKAARVR 31 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di---~~a~n~a~~~~ 31 (274)
++|+|||||||++.-..+ -..+-.+++++
T Consensus 127 kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~L 158 (301)
T TIGR01684 127 HVVVFDLDSTLITDEEPVRIRDPRIYDSLTEL 158 (301)
T ss_pred eEEEEecCCCCcCCCCccccCCHHHHHHHHHH
Confidence 789999999999986543 25566666666
No 194
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.11 E-value=0.099 Score=48.54 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=22.0
Q ss_pred eEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
+++||+||||+++-.- ..++..+++.+
T Consensus 2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L 28 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKP-IAGASDALRRL 28 (321)
T ss_pred EEEEeCcCceECCccc-cHHHHHHHHHH
Confidence 6899999999999875 66666677776
No 195
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=92.02 E-value=0.072 Score=45.34 Aligned_cols=15 Identities=40% Similarity=0.543 Sum_probs=13.6
Q ss_pred CceEEEecCcccccC
Q 024003 2 EDLYALDFDGVICDS 16 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS 16 (274)
.|+|+||+||||+|+
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 479999999999996
No 196
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=91.79 E-value=0.063 Score=41.33 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=13.7
Q ss_pred eEEEecCcccccCHHH
Q 024003 4 LYALDFDGVICDSCEE 19 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~d 19 (274)
+++||+||||+++-+.
T Consensus 1 ~~vfD~D~tl~~~~~~ 16 (139)
T cd01427 1 AVLFDLDGTLLDSEPG 16 (139)
T ss_pred CeEEccCCceEccCcc
Confidence 4899999999998763
No 197
>PLN02382 probable sucrose-phosphatase
Probab=91.78 E-value=0.27 Score=47.48 Aligned_cols=52 Identities=17% Similarity=0.008 Sum_probs=42.5
Q ss_pred CcHHHHHHHHhhC---CCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 196 PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 196 pkp~~l~~~l~~l---~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
.|-..+.++++++ |+++++++.+||+.||+++=+. +|+..|+| | +..+++++
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~----ag~~gvam--~-NA~~elk~ 229 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSV----PDVYGVMV--S-NAQEELLQ 229 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhc----CCCCEEEE--c-CCcHHHHH
Confidence 7889999999999 9999999999999999999886 67666777 4 33345554
No 198
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=91.72 E-value=1.1 Score=47.77 Aligned_cols=91 Identities=12% Similarity=0.217 Sum_probs=65.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc--eEe-cCC-CC------------------CcH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLY-GLG-TG------------------PKV 198 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~--~v~-g~~-~~------------------pkp 198 (274)
.+|=|++.++++ ++|+++.++|+-....|..+-++ .|+..--. .++ |.+ .. =.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 478899999999 89999999999999999999997 99864332 244 543 10 122
Q ss_pred H---HHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 199 N---VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 199 ~---~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
+ -+-+++++. ..-+.|+||..||.-|=|+ |. |||.-|
T Consensus 625 ~qK~~IV~~lq~~---g~vVamtGDGvNDapALk~----AD---VGIamg 664 (917)
T COG0474 625 EQKARIVEALQKS---GHVVAMTGDGVNDAPALKA----AD---VGIAMG 664 (917)
T ss_pred HHHHHHHHHHHhC---CCEEEEeCCCchhHHHHHh----cC---ccEEec
Confidence 2 222334433 4668999999999999987 55 555555
No 199
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=91.02 E-value=0.13 Score=47.47 Aligned_cols=29 Identities=10% Similarity=0.086 Sum_probs=21.1
Q ss_pred ceEEEecCcccccCHHHH---HHHHHHHHHHh
Q 024003 3 DLYALDFDGVICDSCEET---ALSAVKAARVR 31 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di---~~a~n~a~~~~ 31 (274)
++|+||+||||+++-..+ -..+-.+++++
T Consensus 129 ~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eL 160 (303)
T PHA03398 129 HVIVFDLDSTLITDEEPVRIRDPFVYDSLDEL 160 (303)
T ss_pred cEEEEecCCCccCCCCccccCChhHHHHHHHH
Confidence 799999999999995544 34455555555
No 200
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=90.92 E-value=0.16 Score=44.97 Aligned_cols=71 Identities=14% Similarity=0.027 Sum_probs=40.8
Q ss_pred hCCCcEEEEcCCchH----HHHHHHHHHhCCC----CCCceEecCCC-C-CcHHHHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 156 LASSRIYIVTSNQSR----FVETLLRELAGVT----ITPDRLYGLGT-G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 156 ~~g~~laIvTnK~~~----~~~~iL~~~~gl~----~~f~~v~g~~~-~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
.+-+...|..-..+. +.. .|.. .|+. ..|-.|.+... | .....+++.-++++... -++-+||+.||+
T Consensus 146 ~rEyseti~~rs~d~~~~~~~~-~L~e-~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r-~t~~~GDg~nD~ 222 (274)
T COG3769 146 LREYSETIIWRSSDERMAQFTA-RLNE-RGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGAR-TTLGLGDGPNDA 222 (274)
T ss_pred HHHhhhheeecccchHHHHHHH-HHHh-cCceEEeccceEEEeccccCccHHHHHHHHHHHhcCcee-EEEecCCCCCcc
Confidence 344555555544433 333 3442 5664 34566666543 3 44556666666666543 589999999997
Q ss_pred HHhh
Q 024003 226 KNVI 229 (274)
Q Consensus 226 ~aA~ 229 (274)
=.--
T Consensus 223 Pl~e 226 (274)
T COG3769 223 PLLE 226 (274)
T ss_pred cHHH
Confidence 6543
No 201
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=90.88 E-value=3.5 Score=37.01 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=71.7
Q ss_pred CCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc--eEecCCCC-CcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~------~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~--~v~g~~~~-pkp~~l~~~l~~l~~~~~ 213 (274)
.-.|+|.+.++++ +.|+.+.-+++..-..++++.+ +|-+-..- .-+|+..+ .+|+.+..+.+..+++
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~vp-- 177 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADVP-- 177 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCCc--
Confidence 4578999999999 5799888566666677888877 57654333 45564444 5799999888765544
Q ss_pred cEEEEc---CChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 214 RLHFVE---DRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 214 ~~l~VG---Ds~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
|++| .++.|+..|.+ .|...+.|.++...
T Consensus 178 --VI~egGI~tpeda~~Ame----lGAdgVlV~SAIt~ 209 (248)
T cd04728 178 --VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAK 209 (248)
T ss_pred --EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhcC
Confidence 6766 35788888887 89999999999865
No 202
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=90.75 E-value=0.49 Score=42.76 Aligned_cols=67 Identities=18% Similarity=0.135 Sum_probs=46.5
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
.|-..+.++++.+|+..++++++||..+|+.+=+.... -+-.+|.| |-.. -.+ ++.+.+++++...|
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~-~~g~~vav--g~a~------~~A--~~~l~~~~~v~~~L 240 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNR-LGGISVKV--GTGA------TQA--SWRLAGVPDVWSWL 240 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHh-cCCeEEEE--CCCC------CcC--eEeCCCHHHHHHHH
Confidence 78889999999999999999999999999887664100 12334555 4221 112 37788888776554
No 203
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=90.58 E-value=0.12 Score=42.74 Aligned_cols=14 Identities=50% Similarity=0.805 Sum_probs=12.9
Q ss_pred ceEEEecCcccccC
Q 024003 3 DLYALDFDGVICDS 16 (274)
Q Consensus 3 ~~ilFDlDGTLvDS 16 (274)
|+|+||.||||+|.
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 2 RLLILDVDGVLTDG 15 (154)
T ss_pred eEEEEeCceeEEcC
Confidence 78999999999984
No 204
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.06 E-value=0.53 Score=42.00 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=40.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcC---CchHHHHHHHHHHhCCCCCCceEecC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGL 192 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTn---K~~~~~~~iL~~~~gl~~~f~~v~g~ 192 (274)
..++||+.+.|+ ++|+++.++|| ++.......|++ +|++...+.|+..
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~-~g~~~~~~~iit~ 69 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS-FDIPATLETVFTA 69 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEeeH
Confidence 467899999998 79999999998 667778888886 9998777777764
No 205
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=89.98 E-value=0.18 Score=45.57 Aligned_cols=46 Identities=9% Similarity=-0.042 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 170 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 170 ~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
..++.++++ +|+..-.-..+| |...+-+++..+-+ ++ .-.+-||.+
T Consensus 177 ~al~~ll~~-~~~~~~~v~~~G-D~~nD~~mf~~~~~-~~---g~~vavg~a 222 (266)
T PRK10187 177 EAIAAFMQE-APFAGRTPVFVG-DDLTDEAGFAVVNR-LG---GISVKVGTG 222 (266)
T ss_pred HHHHHHHHh-cCCCCCeEEEEc-CCccHHHHHHHHHh-cC---CeEEEECCC
Confidence 456778885 887654333344 54567777776633 22 234777755
No 206
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=88.41 E-value=0.23 Score=44.13 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHH
Q 024003 170 RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQL 204 (274)
Q Consensus 170 ~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~ 204 (274)
..++.++++ +++..-...++| |+..+.+++..+
T Consensus 170 ~a~~~~~~~-~~~~~~~~i~iG-D~~~D~~~~~~~ 202 (244)
T TIGR00685 170 EIVKRLLWH-QPGSGISPVYLG-DDITDEDAFRVV 202 (244)
T ss_pred HHHHHHHHh-cccCCCceEEEc-CCCcHHHHHHHH
Confidence 677788885 887654444445 545677777766
No 207
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=87.47 E-value=0.32 Score=41.26 Aligned_cols=51 Identities=14% Similarity=0.138 Sum_probs=23.5
Q ss_pred EEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 162 YIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 162 aIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
-|-.++....-+++.++ .|+. |-+.++=.|... - .+...++|+. |++|-|+
T Consensus 103 eI~~gsK~~Hf~~i~~~-tgI~-y~eMlFFDDe~~---N-~~~v~~lGV~---~v~v~~G 153 (169)
T PF12689_consen 103 EIYPGSKTTHFRRIHRK-TGIP-YEEMLFFDDESR---N-IEVVSKLGVT---CVLVPDG 153 (169)
T ss_dssp EESSS-HHHHHHHHHHH-H----GGGEEEEES-HH---H-HHHHHTTT-E---EEE-SSS
T ss_pred heecCchHHHHHHHHHh-cCCC-hhHEEEecCchh---c-ceeeEecCcE---EEEeCCC
Confidence 33334445556677775 8985 445555433211 1 2234458875 7888774
No 208
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=87.43 E-value=0.33 Score=39.68 Aligned_cols=17 Identities=24% Similarity=0.401 Sum_probs=14.6
Q ss_pred CceEEEecCcccccCHH
Q 024003 2 EDLYALDFDGVICDSCE 18 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~ 18 (274)
+..+++||||||++|..
T Consensus 2 k~~lvldld~tl~~~~~ 18 (148)
T smart00577 2 KKTLVLDLDETLVHSTH 18 (148)
T ss_pred CcEEEEeCCCCeECCCC
Confidence 36799999999999864
No 209
>PRK00208 thiG thiazole synthase; Reviewed
Probab=87.33 E-value=9.1 Score=34.46 Aligned_cols=96 Identities=15% Similarity=0.172 Sum_probs=70.4
Q ss_pred CCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc--eEecCCCC-CcHHHHHHHHhhCCCCCC
Q 024003 143 ANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 143 ~~~lypGv~e~L~------~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~--~v~g~~~~-pkp~~l~~~l~~l~~~~~ 213 (274)
.-.++|.+.++++ +.|+.+.-+++..-..++++.+ +|-+-..- ..+|+..+ .+|+.+..+.+..+++
T Consensus 102 ~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~vp-- 177 (250)
T PRK00208 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADVP-- 177 (250)
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCCe--
Confidence 4568999999999 5699888455556677777776 67664333 55665444 5799988888765554
Q ss_pred cEEEEcC---ChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 214 RLHFVED---RLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 214 ~~l~VGD---s~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
+++|= ++.|+..|.+ .|...+.|.+|...
T Consensus 178 --VIveaGI~tpeda~~Ame----lGAdgVlV~SAItk 209 (250)
T PRK00208 178 --VIVDAGIGTPSDAAQAME----LGADAVLLNTAIAV 209 (250)
T ss_pred --EEEeCCCCCHHHHHHHHH----cCCCEEEEChHhhC
Confidence 77764 5678888887 89999999999865
No 210
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=86.86 E-value=0.63 Score=41.73 Aligned_cols=46 Identities=26% Similarity=0.381 Sum_probs=35.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHHhCCCCCCceEec
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYG 191 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~---~~~iL~~~~gl~~~f~~v~g 191 (274)
.++||+.+.|+ ++|++++++||.+... ....|+. +|++.-.+.|+.
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~t 72 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFT 72 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEc
Confidence 38999999998 7999999999966654 5566665 787654555554
No 211
>PRK10444 UMP phosphatase; Provisional
Probab=86.43 E-value=2.2 Score=38.21 Aligned_cols=47 Identities=21% Similarity=0.295 Sum_probs=34.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--HhCCCCCCceEec
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDRLYG 191 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~--~~gl~~~f~~v~g 191 (274)
.++||+.+.|+ ++|+++.++||.+......+.++ .+|+..-.+.|+.
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~t 68 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYT 68 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEec
Confidence 68999999998 79999999999888665555443 1577544555654
No 212
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=86.28 E-value=0.37 Score=37.02 Aligned_cols=14 Identities=36% Similarity=0.809 Sum_probs=11.9
Q ss_pred EEEecCcccccCHH
Q 024003 5 YALDFDGVICDSCE 18 (274)
Q Consensus 5 ilFDlDGTLvDS~~ 18 (274)
++||+||||.+.-.
T Consensus 1 ~l~D~dGvl~~g~~ 14 (101)
T PF13344_consen 1 FLFDLDGVLYNGNE 14 (101)
T ss_dssp EEEESTTTSEETTE
T ss_pred CEEeCccEeEeCCC
Confidence 69999999998654
No 213
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=86.12 E-value=6.4 Score=34.65 Aligned_cols=81 Identities=20% Similarity=0.299 Sum_probs=47.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEE
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 216 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~---~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l 216 (274)
...+|||+.+.|+ ++|+++.++||.+ .......|.+++|+...++.++.+ ...+...+++.. +...++
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits-----~~~~~~~l~~~~-~~~~v~ 85 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS-----GSVTKDLLRQRF-EGEKVY 85 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH-----HHHHHHHHHHhC-CCCEEE
Confidence 3578999999998 6899999999644 443333344346776556666642 223333343322 224577
Q ss_pred EEcCChhHHHHhhc
Q 024003 217 FVEDRLATLKNVIK 230 (274)
Q Consensus 217 ~VGDs~~Di~aA~~ 230 (274)
.+|.. ...+..++
T Consensus 86 v~G~~-~~~~~l~~ 98 (236)
T TIGR01460 86 VIGVG-ELRESLEG 98 (236)
T ss_pred EECCH-HHHHHHHH
Confidence 78853 33334343
No 214
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=85.89 E-value=0.37 Score=40.72 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=30.1
Q ss_pred CCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHh
Q 024003 166 SNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 228 (274)
Q Consensus 166 nK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA 228 (274)
.|| ...+.++++ +|+..--...+| |+..+-.+ ++..|+. +.++++..++..+
T Consensus 82 pkp-~~~~~~~~~-l~~~~~ev~~iG-D~~nDi~~----~~~ag~~----~am~nA~~~lk~~ 133 (169)
T TIGR02726 82 KKT-EPYAQMLEE-MNISDAEVCYVG-DDLVDLSM----MKRVGLA----VAVGDAVADVKEA 133 (169)
T ss_pred CCH-HHHHHHHHH-cCcCHHHEEEEC-CCHHHHHH----HHHCCCe----EECcCchHHHHHh
Confidence 454 456677775 887643233444 43334333 3445655 8888888888654
No 215
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=85.36 E-value=4.8 Score=43.53 Aligned_cols=39 Identities=28% Similarity=0.423 Sum_probs=35.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
.++-|++.+.++ ++|+++.++|+-....+..+-++ .|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 478899999999 89999999999999999999997 9984
No 216
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=84.37 E-value=2.1 Score=42.51 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=57.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
...||+.|-.+ +.|++...||.-.+-.+..+-++ -|++.|.. + .+|+-=.++.++-+....=+.|.||.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiA-----e--atPEdK~~~I~~eQ~~grlVAMtGDG 518 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIA-----E--ATPEDKLALIRQEQAEGRLVAMTGDG 518 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhh-----c--CChHHHHHHHHHHHhcCcEEEEcCCC
Confidence 45699999888 79999999999999999999886 89986532 1 24443333444444455668999999
Q ss_pred hhHHHHhhc
Q 024003 222 LATLKNVIK 230 (274)
Q Consensus 222 ~~Di~aA~~ 230 (274)
.||.-+=.+
T Consensus 519 TNDAPALAq 527 (681)
T COG2216 519 TNDAPALAQ 527 (681)
T ss_pred CCcchhhhh
Confidence 999876443
No 217
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=83.95 E-value=0.58 Score=40.58 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=56.5
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCC----CceEecCC---------CCCc-HHHHHHHHhhCC--
Q 024003 148 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTIT----PDRLYGLG---------TGPK-VNVLKQLQKKPE-- 209 (274)
Q Consensus 148 pGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~----f~~v~g~~---------~~pk-p~~l~~~l~~l~-- 209 (274)
||+.++|+ .+.+.++|-|+.....++.+++. +|+... ...+.... .++. -..+..+-.+++
T Consensus 48 P~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~ 126 (195)
T TIGR02245 48 PYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEF 126 (195)
T ss_pred CCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccC
Confidence 67777777 67889999999999999999996 776321 11122111 1111 111333333454
Q ss_pred CCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 210 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 210 ~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
.+.+++|+|.|++.-...--. .|+++- +|-
T Consensus 127 ~~~~ntiiVDd~p~~~~~~P~----N~i~I~--~f~ 156 (195)
T TIGR02245 127 YSMKNTIMFDDLRRNFLMNPQ----NGLKIR--PFK 156 (195)
T ss_pred CCcccEEEEeCCHHHHhcCCC----CccccC--Ccc
Confidence 367899999999877654322 466654 554
No 218
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=83.68 E-value=2.4 Score=36.51 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=30.7
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 147 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 147 ypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
.|-..+.|+ ++|++++|+||++...++.+++. +++.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 333667777 79999999999999999999996 8886
No 219
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=83.52 E-value=13 Score=40.38 Aligned_cols=35 Identities=17% Similarity=0.357 Sum_probs=28.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE 178 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~ 178 (274)
-+|=.||.|+++ ++|||+-|.|+-..+.|..+--.
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s 687 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS 687 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh
Confidence 478899999998 89999999999877777666543
No 220
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=83.45 E-value=6.8 Score=35.35 Aligned_cols=80 Identities=11% Similarity=0.155 Sum_probs=59.8
Q ss_pred CcEEEEcCCchHHHHHHHHHHhCCCCCC--ceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCC
Q 024003 159 SRIYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 236 (274)
Q Consensus 159 ~~laIvTnK~~~~~~~iL~~~~gl~~~f--~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Ag 236 (274)
+.+.|-|+.--+.+-+.|= +||+.+| +-|+....--|...++.+.+++|-+....+.|||+.---.+|+. -+
T Consensus 177 vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~----l~ 250 (274)
T TIGR01658 177 INVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQA----MN 250 (274)
T ss_pred eEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHh----cC
Confidence 4455555555555556653 7888766 45665433389999999999999888899999999988899997 78
Q ss_pred CcEEEEeC
Q 024003 237 WNLYLVDW 244 (274)
Q Consensus 237 v~~i~v~w 244 (274)
+|++=++-
T Consensus 251 wPFw~I~~ 258 (274)
T TIGR01658 251 WPFVKIDL 258 (274)
T ss_pred CCeEEeec
Confidence 88887754
No 221
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=83.16 E-value=1.1 Score=47.35 Aligned_cols=70 Identities=11% Similarity=0.017 Sum_probs=44.8
Q ss_pred CcHHHHHHHHh---hCCCCCCcEEEEcCChhHHHHhhccCcc-CC--C----cEEEEeCCCCChHHHHhcCCCCCceeec
Q 024003 196 PKVNVLKQLQK---KPEHQGLRLHFVEDRLATLKNVIKEPEL-DG--W----NLYLVDWGYNTPKERAEAASMPRIQLLQ 265 (274)
Q Consensus 196 pkp~~l~~~l~---~l~~~~~~~l~VGDs~~Di~aA~~~~~~-Ag--v----~~i~v~wGy~~~~~l~~a~~~P~~~~~~ 265 (274)
.|-..+..+++ .+|..++.+++|||..+|..+=+..+.. .| + ..++|+=|-+. ..|. +.+.+
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~------S~A~--y~L~d 833 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKP------SKAK--YYLDD 833 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCC------ccCe--EecCC
Confidence 67778888764 4688999999999999998886653210 11 1 12344435321 2223 77888
Q ss_pred hhHHHhhc
Q 024003 266 LSDFCTKL 273 (274)
Q Consensus 266 ~~~~~~~~ 273 (274)
++++...|
T Consensus 834 ~~eV~~lL 841 (854)
T PLN02205 834 TAEIVRLM 841 (854)
T ss_pred HHHHHHHH
Confidence 88876655
No 222
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=83.13 E-value=1.5 Score=41.45 Aligned_cols=70 Identities=19% Similarity=0.227 Sum_probs=49.3
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhC--CCCCCceEecCCCC-------CcH---------------------------H
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG-------PKV---------------------------N 199 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~g--l~~~f~~v~g~~~~-------pkp---------------------------~ 199 (274)
++|.+|.++||.|-.|+..-+....| +...||+|+-.-.| .+| -
T Consensus 254 ~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~klekgkiYy~G 333 (510)
T KOG2470|consen 254 DHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVDKLEKGKIYYQG 333 (510)
T ss_pred HhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhhhcccCceeeec
Confidence 78999999999999999988873223 34689998864321 111 1
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
-+...++-.|....+++|+||..+-=
T Consensus 334 ~l~~flelt~WrG~~VlYFGDHlySD 359 (510)
T KOG2470|consen 334 NLKSFLELTGWRGPRVLYFGDHLYSD 359 (510)
T ss_pred cHHHHHHHhccCCCeeEEecCcchhh
Confidence 24455555577778999999998643
No 223
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=82.52 E-value=0.76 Score=38.33 Aligned_cols=17 Identities=24% Similarity=0.317 Sum_probs=14.3
Q ss_pred CceEEEecCcccccCHH
Q 024003 2 EDLYALDFDGVICDSCE 18 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~~ 18 (274)
++.+++|||+|||.|-.
T Consensus 1 k~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTF 17 (162)
T ss_pred CcEEEEcCCCCcCCCCC
Confidence 36899999999999943
No 224
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=82.29 E-value=0.63 Score=42.32 Aligned_cols=99 Identities=15% Similarity=0.069 Sum_probs=55.0
Q ss_pred CCCCccHHHHHHhCCCcEEEEcCC--chHHHHHHHHH-HhCCCCC-CceEecCC------CC-CcHHHHHHHHhhCCCCC
Q 024003 144 NRLYPGVSDALKLASSRIYIVTSN--QSRFVETLLRE-LAGVTIT-PDRLYGLG------TG-PKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 144 ~~lypGv~e~L~~~g~~laIvTnK--~~~~~~~iL~~-~~gl~~~-f~~v~g~~------~~-pkp~~l~~~l~~l~~~~ 212 (274)
..-+||+. ++.+|+-+++-+-+ ++......+.. ...+... .....|.. .+ .|-..+.+++++++...
T Consensus 121 v~r~pGs~--iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~ 198 (266)
T COG1877 121 VERTPGSY--IERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDG 198 (266)
T ss_pred hhcCCCeE--EEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCC
Confidence 34567742 33678878887732 22222222221 1233333 23333543 12 67888999999888776
Q ss_pred CcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCC
Q 024003 213 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 213 ~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~ 247 (274)
.-+++.||-..|=.+=... .+...+.|.=|.+
T Consensus 199 ~~~~~aGDD~TDE~~F~~v---~~~~~~~v~v~~~ 230 (266)
T COG1877 199 RFPIFAGDDLTDEDAFAAV---NKLDSITVKVGVG 230 (266)
T ss_pred CcceecCCCCccHHHHHhh---ccCCCceEEecCC
Confidence 6789999999886544331 2333444444544
No 225
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=82.26 E-value=0.71 Score=38.72 Aligned_cols=13 Identities=38% Similarity=0.296 Sum_probs=11.8
Q ss_pred ceEEEecCccccc
Q 024003 3 DLYALDFDGVICD 15 (274)
Q Consensus 3 ~~ilFDlDGTLvD 15 (274)
|+++||.||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 6899999999985
No 226
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=82.17 E-value=5.7 Score=39.17 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=59.1
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCC--------CCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHH
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--------GPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKN 227 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~--------~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~a 227 (274)
++|+-++|||-....-++.+..+ + .+.|.-.+. .||.+-++++++++++.-+..+||.|++.-.+-
T Consensus 269 kqGVlLav~SKN~~~da~evF~k-h-----p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~ 342 (574)
T COG3882 269 KQGVLLAVCSKNTEKDAKEVFRK-H-----PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAEREL 342 (574)
T ss_pred hccEEEEEecCCchhhHHHHHhh-C-----CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHH
Confidence 69999999999899999888885 3 355655331 299999999999999999999999999999999
Q ss_pred hhc
Q 024003 228 VIK 230 (274)
Q Consensus 228 A~~ 230 (274)
-++
T Consensus 343 vk~ 345 (574)
T COG3882 343 VKR 345 (574)
T ss_pred HHh
Confidence 987
No 227
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=81.72 E-value=5 Score=34.79 Aligned_cols=14 Identities=36% Similarity=0.513 Sum_probs=12.8
Q ss_pred ceEEEecCcccccC
Q 024003 3 DLYALDFDGVICDS 16 (274)
Q Consensus 3 ~~ilFDlDGTLvDS 16 (274)
++++.||||||+|+
T Consensus 22 klLVLDLDeTLvh~ 35 (195)
T TIGR02245 22 KLLVLDIDYTLFDH 35 (195)
T ss_pred cEEEEeCCCceEcc
Confidence 69999999999975
No 228
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=81.68 E-value=5.3 Score=41.81 Aligned_cols=102 Identities=17% Similarity=0.218 Sum_probs=68.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc----eEe-cCC--C-----------------CCc
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----RLY-GLG--T-----------------GPK 197 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~----~v~-g~~--~-----------------~pk 197 (274)
+|=|+|.+.++ ++|+++.++|+-..+.++.|.++ .|+-..-+ .++ |.+ . .-.
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 56688888888 89999999999999999999997 99865444 233 322 0 012
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHh
Q 024003 198 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 254 (274)
Q Consensus 198 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~ 254 (274)
|..=.++.+.|.-..+=+.|-||..||--+=|. |. ||+.-|-..-+--++
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~----Ad---IGIAMG~~GTdVaKe 712 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKK----AD---IGIAMGISGTDVAKE 712 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhh----cc---cceeecCCccHhhHh
Confidence 222233333333344557999999999998887 33 788888543333333
No 229
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=81.41 E-value=1.2 Score=45.91 Aligned_cols=64 Identities=13% Similarity=-0.039 Sum_probs=43.6
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
.|-..+..+++ +.+++.++++||+.+|..+-+. ++-..++|+=|-. ...+. +.+.+++++.+.|
T Consensus 657 nKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~----~~~~~~~v~vG~~------~s~A~--~~l~~~~eV~~~L 720 (726)
T PRK14501 657 NKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRA----LPETAITVKVGPG------ESRAR--YRLPSQREVRELL 720 (726)
T ss_pred CHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHh----cccCceEEEECCC------CCcce--EeCCCHHHHHHHH
Confidence 78888998888 7788999999999999999886 3212233333521 12233 7777777765544
No 230
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=81.12 E-value=3.2 Score=36.39 Aligned_cols=40 Identities=23% Similarity=0.053 Sum_probs=34.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
...|+..+.|+ ++|+++.++|+++...+..++++ +|+..+
T Consensus 15 ~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~~ 57 (225)
T TIGR02461 15 YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEPP 57 (225)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCc
Confidence 46678889888 78999999999999999999997 898653
No 231
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=80.82 E-value=3.3 Score=39.77 Aligned_cols=84 Identities=14% Similarity=0.179 Sum_probs=62.1
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHHhC--CCCCCceEecCCCC----------------------------------CcHH
Q 024003 156 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG----------------------------------PKVN 199 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~~g--l~~~f~~v~g~~~~----------------------------------pkp~ 199 (274)
+.|.++.++||..-.++...+.+++| +..||+.|+-...| +.+-
T Consensus 212 ~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~~ySgg 291 (424)
T KOG2469|consen 212 DSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGGVYSGG 291 (424)
T ss_pred hhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcccCCcc
Confidence 89999999999999999999997666 55788877743111 2224
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEE
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v 242 (274)
....+++.+++...+++||||.. .||..-+. .-|..++.|
T Consensus 292 s~~~~~~~l~~~g~diLy~gdHi~~dvl~skk---~~~wrt~lv 332 (424)
T KOG2469|consen 292 SLKTVETSMKVKGKDILYGGDHIWGDVLVSKK---RRGWRTVLV 332 (424)
T ss_pred hHHHHHHHhcccccceeecccceeeeEEecce---ecceEEEEE
Confidence 56667777888889999999986 46666554 356666666
No 232
>PLN03017 trehalose-phosphatase
Probab=80.49 E-value=0.99 Score=42.90 Aligned_cols=70 Identities=13% Similarity=-0.031 Sum_probs=42.6
Q ss_pred CcHHHHHHHHhhCCCCC---CcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHhh
Q 024003 196 PKVNVLKQLQKKPEHQG---LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 272 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~---~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~ 272 (274)
.|-..+..+++.++... .-.+||||-.+|-.+=+.......-..|.| |-..++ ..+. +.+.+++++...
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V--G~~~k~----T~A~--y~L~dp~eV~~f 354 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV--SKFPKD----TDAS--YSLQDPSEVMDF 354 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE--CCCCCC----Ccce--EeCCCHHHHHHH
Confidence 56688999999988653 358999999999666443110011123444 432221 2233 788888888665
Q ss_pred c
Q 024003 273 L 273 (274)
Q Consensus 273 ~ 273 (274)
|
T Consensus 355 L 355 (366)
T PLN03017 355 L 355 (366)
T ss_pred H
Confidence 5
No 233
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=80.17 E-value=4.5 Score=36.64 Aligned_cols=76 Identities=26% Similarity=0.261 Sum_probs=51.7
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHH--hCCCCCCce--EecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc
Q 024003 156 LASSRIYIVTSNQSRFVETLLREL--AGVTITPDR--LYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~~~~iL~~~--~gl~~~f~~--v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
..-++++|||......-+++++.+ .|+. .|- ..|+- +|..+|... + |. ||+.|...-++.|.
T Consensus 184 ~~piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLgG~--~K~~vL~~~----~--ph--IFFDDQ~~H~~~a~-- 249 (264)
T PF06189_consen 184 NSPIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLGGL--PKGPVLKAF----R--PH--IFFDDQDGHLESAS-- 249 (264)
T ss_pred CCceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhCCC--chhHHHHhh----C--CC--EeecCchhhhhHhh--
Confidence 356899999987666555555432 4553 332 22432 566555432 3 44 99999999999998
Q ss_pred CccCCCcEEEEeCCCCC
Q 024003 232 PELDGWNLYLVDWGYNT 248 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy~~ 248 (274)
.++|++-|.||-.+
T Consensus 250 ---~~vps~hVP~gv~n 263 (264)
T PF06189_consen 250 ---KVVPSGHVPYGVAN 263 (264)
T ss_pred ---cCCCEEeccCCcCC
Confidence 48999999999653
No 234
>PLN02151 trehalose-phosphatase
Probab=79.85 E-value=1.1 Score=42.51 Aligned_cols=69 Identities=14% Similarity=0.033 Sum_probs=41.8
Q ss_pred CcHHHHHHHHhhCCCCCC---cEEEEcCChhHHHHhhccCc-cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 196 PKVNVLKQLQKKPEHQGL---RLHFVEDRLATLKNVIKEPE-LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~---~~l~VGDs~~Di~aA~~~~~-~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
.|-..+..++++++.... -.+||||-.+|-.+=+.... ..|+ .|.| |...+ ...+. +.+.+++++..
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~V--g~~~k----~T~A~--y~L~dp~eV~~ 339 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILV--SKYAK----ETNAS--YSLQEPDEVME 339 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEe--ccCCC----CCcce--EeCCCHHHHHH
Confidence 567889999998875533 27999999999666443110 0232 2334 32221 12233 88889888876
Q ss_pred hc
Q 024003 272 KL 273 (274)
Q Consensus 272 ~~ 273 (274)
.|
T Consensus 340 ~L 341 (354)
T PLN02151 340 FL 341 (354)
T ss_pred HH
Confidence 55
No 235
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=79.80 E-value=1 Score=37.84 Aligned_cols=18 Identities=39% Similarity=0.447 Sum_probs=15.2
Q ss_pred CCceEEEecCcccccCHH
Q 024003 1 MEDLYALDFDGVICDSCE 18 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~ 18 (274)
|.|+++||.||||.|..=
T Consensus 7 ~IkLli~DVDGvLTDG~l 24 (170)
T COG1778 7 NIKLLILDVDGVLTDGKL 24 (170)
T ss_pred hceEEEEeccceeecCeE
Confidence 358999999999999753
No 236
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=79.54 E-value=3.9 Score=37.86 Aligned_cols=42 Identities=17% Similarity=0.102 Sum_probs=35.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP 186 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f 186 (274)
+..++-+.+.|+ ++|++++++|+|....+..+.+. +++..+|
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl~~p~ 61 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQ-LRLEHPF 61 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCCCCeE
Confidence 456777888887 79999999999999999999997 9987543
No 237
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=79.14 E-value=1.2 Score=37.27 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=14.1
Q ss_pred ceEEEecCcccccCHH
Q 024003 3 DLYALDFDGVICDSCE 18 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~ 18 (274)
|+++||.||||.++.+
T Consensus 2 ~~~~~d~dg~l~~~~~ 17 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP 17 (161)
T ss_pred CEEEEeCCCCccccCC
Confidence 7899999999998655
No 238
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=76.91 E-value=11 Score=35.37 Aligned_cols=82 Identities=16% Similarity=0.212 Sum_probs=54.9
Q ss_pred CCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHHhCCC-------------CCCceEecCCCCCcHHHHHHHH
Q 024003 143 ANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVT-------------ITPDRLYGLGTGPKVNVLKQLQ 205 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g-~~laIvTnK~~~~~~~iL~~~~gl~-------------~~f~~v~g~~~~pkp~~l~~~l 205 (274)
..+++|||....+ +.| .++.-+||.|..+-..+-+ +++-. ..|+.++++....|-..+..++
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~e-fi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil 272 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQE-FITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNIL 272 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHH-HHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHH
Confidence 4689999999998 455 8999999999876544333 23221 2345555443336667777777
Q ss_pred hhCCCCCCcEEEEcCC-hhHHHH
Q 024003 206 KKPEHQGLRLHFVEDR-LATLKN 227 (274)
Q Consensus 206 ~~l~~~~~~~l~VGDs-~~Di~a 227 (274)
.++. ..+.+.|||| .+|.+.
T Consensus 273 ~~~p--~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 273 RRYP--DRKFVLVGDSGEHDPEI 293 (373)
T ss_pred HhCC--CceEEEecCCCCcCHHH
Confidence 7654 4578999997 466543
No 239
>PLN02580 trehalose-phosphatase
Probab=76.13 E-value=1.4 Score=42.20 Aligned_cols=69 Identities=16% Similarity=0.037 Sum_probs=45.3
Q ss_pred CcHHHHHHHHhhCCCCCCc---EEEEcCChhHHHHhhccCc-cCCCcEEEEeCCCCChHHHHhcCCCCCceeechhHHHh
Q 024003 196 PKVNVLKQLQKKPEHQGLR---LHFVEDRLATLKNVIKEPE-LDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 271 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~---~l~VGDs~~Di~aA~~~~~-~Agv~~i~v~wGy~~~~~l~~a~~~P~~~~~~~~~~~~ 271 (274)
.|-..+..+++++++...+ .+||||..+|..+=+.... +.|+ .|.|.-| .. ...+ ++.+.+++++..
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~--~~----~t~A--~y~L~dp~eV~~ 371 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSV--PK----ESNA--FYSLRDPSEVME 371 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecC--CC----Cccc--eEEcCCHHHHHH
Confidence 6778999999999987653 3899999999988764111 0232 3444322 21 1223 388888888876
Q ss_pred hc
Q 024003 272 KL 273 (274)
Q Consensus 272 ~~ 273 (274)
.|
T Consensus 372 ~L 373 (384)
T PLN02580 372 FL 373 (384)
T ss_pred HH
Confidence 55
No 240
>PTZ00174 phosphomannomutase; Provisional
Probab=75.78 E-value=3.9 Score=36.22 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=25.2
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
|+|+|||||||+|+-..+......+++.+
T Consensus 6 klia~DlDGTLL~~~~~is~~~~~ai~~l 34 (247)
T PTZ00174 6 TILLFDVDGTLTKPRNPITQEMKDTLAKL 34 (247)
T ss_pred eEEEEECcCCCcCCCCCCCHHHHHHHHHH
Confidence 89999999999999877777777777777
No 241
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=75.00 E-value=2 Score=37.65 Aligned_cols=35 Identities=9% Similarity=0.038 Sum_probs=24.7
Q ss_pred CcHHHHHHHHhhCCCC---CCcEEEEcCChhHHHHhhc
Q 024003 196 PKVNVLKQLQKKPEHQ---GLRLHFVEDRLATLKNVIK 230 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~---~~~~l~VGDs~~Di~aA~~ 230 (274)
.|-..+..++++++.. +.-++|+||...|-.+=+.
T Consensus 165 ~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~ 202 (235)
T PF02358_consen 165 NKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRA 202 (235)
T ss_dssp -HHHHHHHHHTTS---------EEEEESSHHHHHHHHT
T ss_pred ChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHH
Confidence 5788999999998865 7789999999999777665
No 242
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=74.64 E-value=1.6 Score=41.58 Aligned_cols=17 Identities=24% Similarity=0.579 Sum_probs=15.4
Q ss_pred ceEEEecCcccccCHHH
Q 024003 3 DLYALDFDGVICDSCEE 19 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~d 19 (274)
|.+.||+||||+||.+.
T Consensus 76 K~i~FD~dgtlI~t~sg 92 (422)
T KOG2134|consen 76 KIIMFDYDGTLIDTKSG 92 (422)
T ss_pred ceEEEecCCceeecCCc
Confidence 78999999999999873
No 243
>PRK06769 hypothetical protein; Validated
Probab=73.99 E-value=2 Score=36.09 Aligned_cols=12 Identities=33% Similarity=0.398 Sum_probs=11.1
Q ss_pred ceEEEecCcccc
Q 024003 3 DLYALDFDGVIC 14 (274)
Q Consensus 3 ~~ilFDlDGTLv 14 (274)
++|+||.||||.
T Consensus 5 ~~~~~d~d~~~~ 16 (173)
T PRK06769 5 QAIFIDRDGTIG 16 (173)
T ss_pred cEEEEeCCCccc
Confidence 899999999994
No 244
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=72.29 E-value=47 Score=31.18 Aligned_cols=96 Identities=17% Similarity=0.240 Sum_probs=72.0
Q ss_pred CCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHHhCCC--CCCceEecCCCC-CcHHHHHHHHhhCCCCC
Q 024003 142 GANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVT--ITPDRLYGLGTG-PKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 142 ~~~~lypGv~e~L~------~~g~~laIvTnK~~~~~~~iL~~~~gl~--~~f~~v~g~~~~-pkp~~l~~~l~~l~~~~ 212 (274)
+.-.++|.+.++++ +.|+.+.++++.....++++.+ +|-. ......||+..+ .+|+.+..+.+...++
T Consensus 175 e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~--~g~~avmPl~~pIGsg~gv~~p~~i~~~~e~~~vp- 251 (326)
T PRK11840 175 DAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED--AGAVAVMPLGAPIGSGLGIQNPYTIRLIVEGATVP- 251 (326)
T ss_pred CCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh--cCCEEEeeccccccCCCCCCCHHHHHHHHHcCCCc-
Confidence 34568999999999 5799997777777778888776 5652 012345564433 7999999999986655
Q ss_pred CcEEEEcC---ChhHHHHhhccCccCCCcEEEEeCCCC
Q 024003 213 LRLHFVED---RLATLKNVIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 213 ~~~l~VGD---s~~Di~aA~~~~~~Agv~~i~v~wGy~ 247 (274)
++||= +..|+..|.+ .|...++|.-|--
T Consensus 252 ---VivdAGIg~~sda~~Ame----lGadgVL~nSaIa 282 (326)
T PRK11840 252 ---VLVDAGVGTASDAAVAME----LGCDGVLMNTAIA 282 (326)
T ss_pred ---EEEeCCCCCHHHHHHHHH----cCCCEEEEcceec
Confidence 77774 5678888887 8999999998874
No 245
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=71.06 E-value=2.4 Score=35.23 Aligned_cols=18 Identities=17% Similarity=0.292 Sum_probs=15.6
Q ss_pred ceEEEecCcccccCHHHH
Q 024003 3 DLYALDFDGVICDSCEET 20 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di 20 (274)
..+++|||.||+.|..+-
T Consensus 7 l~LVLDLDeTLihs~~~~ 24 (156)
T TIGR02250 7 LHLVLDLDQTLIHTTKDP 24 (156)
T ss_pred eEEEEeCCCCcccccccC
Confidence 578999999999998853
No 246
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=69.40 E-value=57 Score=29.63 Aligned_cols=96 Identities=13% Similarity=0.136 Sum_probs=74.3
Q ss_pred CCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHHhCCCC--CCceEecCCCC-CcHHHHHHHHhhCCCCC
Q 024003 142 GANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLYGLGTG-PKVNVLKQLQKKPEHQG 212 (274)
Q Consensus 142 ~~~~lypGv~e~L~------~~g~~laIvTnK~~~~~~~iL~~~~gl~~--~f~~v~g~~~~-pkp~~l~~~l~~l~~~~ 212 (274)
+.-.++|...|+|+ +.|+.+.--||-.-..++++.+ .|-.- ..-.=+|+..+ .+|..|..+++...++
T Consensus 115 D~~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed--~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~vp- 191 (267)
T CHL00162 115 DPKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLED--IGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKIP- 191 (267)
T ss_pred CCcccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--cCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCCc-
Confidence 44579999999999 7999999999999999998877 46531 11222343334 8999999999987766
Q ss_pred CcEEEEcC---ChhHHHHhhccCccCCCcEEEEeCCCC
Q 024003 213 LRLHFVED---RLATLKNVIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 213 ~~~l~VGD---s~~Di~aA~~~~~~Agv~~i~v~wGy~ 247 (274)
++||= +..|+..|.+ .|...+++.-|.-
T Consensus 192 ---VivdAGIgt~sDa~~AmE----lGaDgVL~nSaIa 222 (267)
T CHL00162 192 ---VIIDAGIGTPSEASQAME----LGASGVLLNTAVA 222 (267)
T ss_pred ---EEEeCCcCCHHHHHHHHH----cCCCEEeecceee
Confidence 77764 5688888887 8999999998874
No 247
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=69.35 E-value=7.2 Score=40.31 Aligned_cols=13 Identities=38% Similarity=0.761 Sum_probs=12.3
Q ss_pred ceEEEecCccccc
Q 024003 3 DLYALDFDGVICD 15 (274)
Q Consensus 3 ~~ilFDlDGTLvD 15 (274)
++|+||+||||++
T Consensus 493 rLi~~D~DGTL~~ 505 (726)
T PRK14501 493 RLLLLDYDGTLVP 505 (726)
T ss_pred eEEEEecCccccC
Confidence 7999999999997
No 248
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=69.32 E-value=13 Score=32.83 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=32.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 184 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~ 184 (274)
.+-|...+.|+ ++|++++|+|+.+...+..++++ +++..
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~ 61 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKE-LHMEQ 61 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHH-hCCCC
Confidence 34566777777 79999999999999999999996 88864
No 249
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=69.03 E-value=11 Score=32.50 Aligned_cols=40 Identities=18% Similarity=0.187 Sum_probs=33.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
.+-|...+.|. ++|++++|+|+++...+..+++. +++..+
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKL-IGTSGP 62 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCc
Confidence 35567778887 69999999999999999999996 888754
No 250
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=67.28 E-value=81 Score=28.39 Aligned_cols=119 Identities=18% Similarity=0.178 Sum_probs=62.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecC--------------CC----CCcHHHHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL--------------GT----GPKVNVLK 202 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~--------------~~----~pkp~~l~ 202 (274)
..+=+|+.++++ ++++|+.|.|.--...++.+|++ .|....=-.|+.. +. -.|-+...
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 467799999998 89999999999999999999997 6653211222221 10 02233222
Q ss_pred H---HHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCC--CChHH-HHhcCCCCCceeechhH
Q 024003 203 Q---LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY--NTPKE-RAEAASMPRIQLLQLSD 268 (274)
Q Consensus 203 ~---~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy--~~~~~-l~~a~~~P~~~~~~~~~ 268 (274)
. -.+++ -...+++..|||..|+.+|...+. . -.-..=|| ...++ ++..-..=|+++.+=++
T Consensus 168 ~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~~~---~-~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~t 234 (246)
T PF05822_consen 168 EDSPYFKQL-KKRTNVLLLGDSLGDLHMADGVPD---E-ENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQT 234 (246)
T ss_dssp TTHHHHHCT-TT--EEEEEESSSGGGGTTTT-S------SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B
T ss_pred cCchHHHHh-ccCCcEEEecCccCChHhhcCCCc---c-ccEEEEEecccCHHHHHHHHHhcCCEEEECCCC
Confidence 1 11222 245789999999999999864211 1 12233344 23343 44444434566655443
No 251
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=65.78 E-value=13 Score=32.64 Aligned_cols=40 Identities=20% Similarity=0.379 Sum_probs=33.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
++-|...+.|+ ++|++++|+|+.+...+..++++ +++..+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~~~~ 58 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKE-LGLDTP 58 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCCCC
Confidence 35577788887 79999999999999999999996 887643
No 252
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=65.43 E-value=14 Score=33.93 Aligned_cols=47 Identities=19% Similarity=0.150 Sum_probs=41.5
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC
Q 024003 146 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 193 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~ 193 (274)
.=|.|.+-|. +.|.-|.+=|.-.++.+...|++ ++|..+||.|+++.
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICGG 192 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeCC
Confidence 4578888887 79999999999999999999997 99999999999653
No 253
>PLN02382 probable sucrose-phosphatase
Probab=65.24 E-value=3.4 Score=39.83 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=31.5
Q ss_pred CCchHHHHHHHHHHh---CCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHh
Q 024003 166 SNQSRFVETLLRELA---GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNV 228 (274)
Q Consensus 166 nK~~~~~~~iL~~~~---gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA 228 (274)
||.. .++.+++. + |+..- +.+.-+|+..+-+++..+ ++ -.+.||.+...+...
T Consensus 175 sKg~-Al~~L~~~-~~~~gi~~~-~~iafGDs~NDleMl~~a----g~---~gvam~NA~~elk~~ 230 (413)
T PLN02382 175 GKGQ-ALAYLLKK-LKAEGKAPV-NTLVCGDSGNDAELFSVP----DV---YGVMVSNAQEELLQW 230 (413)
T ss_pred CHHH-HHHHHHHH-hhhcCCChh-cEEEEeCCHHHHHHHhcC----CC---CEEEEcCCcHHHHHH
Confidence 3443 34566674 7 76543 344445665677766542 31 238889999998863
No 254
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=64.72 E-value=14 Score=32.59 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=34.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
.+-|...+.|+ ++|++++|+|+.+...+..++++ +++..+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQA-LALDTP 62 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCC
Confidence 46677778887 79999999999999999999996 888654
No 255
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=64.68 E-value=7.7 Score=33.06 Aligned_cols=39 Identities=26% Similarity=0.398 Sum_probs=34.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 184 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~ 184 (274)
.+-|...+.|+ ++|++++|+|+++...+..+++. +++..
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~~~~ 56 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKE-LGIDD 56 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHH-TTHCS
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCccccccccccc-ccchh
Confidence 45588888888 79999999999999999999996 88873
No 256
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=64.68 E-value=60 Score=29.21 Aligned_cols=73 Identities=10% Similarity=0.033 Sum_probs=46.0
Q ss_pred CCCcEEEEcC---CchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 157 ASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 157 ~g~~laIvTn---K~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
.|+++.+++. .....++.+.+. +. .. ..++ ...+|+-+...+.... ++||.+.|-+..|-.
T Consensus 204 ~g~~v~~i~~~~~~D~~~~~~l~~~-~~--~~-~~i~---~~~~~~e~~~~i~~~~------~vI~~RlH~~I~A~~--- 267 (298)
T TIGR03609 204 TGAFVLFLPFQQPQDLPLARALRDQ-LL--GP-AEVL---SPLDPEELLGLFASAR------LVIGMRLHALILAAA--- 267 (298)
T ss_pred hCCeEEEEeCCcchhHHHHHHHHHh-cC--CC-cEEE---ecCCHHHHHHHHhhCC------EEEEechHHHHHHHH---
Confidence 4777766663 444555555553 32 22 2333 1235555545554333 999999999999987
Q ss_pred cCCCcEEEEeCCC
Q 024003 234 LDGWNLYLVDWGY 246 (274)
Q Consensus 234 ~Agv~~i~v~wGy 246 (274)
+|+|++++.|.-
T Consensus 268 -~gvP~i~i~y~~ 279 (298)
T TIGR03609 268 -AGVPFVALSYDP 279 (298)
T ss_pred -cCCCEEEeeccH
Confidence 899999996653
No 257
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=64.57 E-value=13 Score=33.09 Aligned_cols=40 Identities=10% Similarity=0.028 Sum_probs=34.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
.+-|-..+.|+ ++|++++++|+.+...+..++++ +++..+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGA-LSLDAY 61 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCc
Confidence 46677778887 79999999999999999999997 888754
No 258
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=64.29 E-value=15 Score=32.51 Aligned_cols=39 Identities=21% Similarity=0.150 Sum_probs=32.2
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 146 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
..+...+.|+ ++|++++++|+++...+..++++ +|+..+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~-~~~~~~ 58 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKE-LGLEDP 58 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCCc
Confidence 3445677777 78999999999999999999997 887643
No 259
>PLN02580 trehalose-phosphatase
Probab=64.03 E-value=17 Score=34.86 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=27.5
Q ss_pred CCchHHHHHHHHHHhCCCCC-C--ceEecCCCCCcHHHHHHHHhh-CCCCCCcEEEEcC
Q 024003 166 SNQSRFVETLLRELAGVTIT-P--DRLYGLGTGPKVNVLKQLQKK-PEHQGLRLHFVED 220 (274)
Q Consensus 166 nK~~~~~~~iL~~~~gl~~~-f--~~v~g~~~~pkp~~l~~~l~~-l~~~~~~~l~VGD 220 (274)
||.. .++.++++ +|+... + -..+| |...+.+++..+-+. .|+ .|.||.
T Consensus 301 ~KG~-Av~~Ll~~-~g~~~~d~~~pi~iG-DD~TDedmF~~L~~~~~G~----~I~Vgn 352 (384)
T PLN02580 301 NKGK-AVEFLLES-LGLSNCDDVLPIYIG-DDRTDEDAFKVLREGNRGY----GILVSS 352 (384)
T ss_pred CHHH-HHHHHHHh-cCCCcccceeEEEEC-CCchHHHHHHhhhccCCce----EEEEec
Confidence 5553 45778885 888754 2 13445 545788887765432 133 366664
No 260
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=63.71 E-value=4.9 Score=28.33 Aligned_cols=25 Identities=32% Similarity=0.286 Sum_probs=15.7
Q ss_pred HHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 201 LKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 201 l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.+++++.|+= ||+||+..|++...
T Consensus 7 VqQLLK~fG~~----IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGII----IYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCEE----EEeCChHHHHHHHH
Confidence 46788899975 99999999998754
No 261
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=63.06 E-value=16 Score=31.15 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=33.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
.+-|...+.|+ ++|++++++|+.+...+..+++. +|+..+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l~~~~~ 57 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKL-IGTPDP 57 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCe
Confidence 45577777787 69999999999999999999996 886543
No 262
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=62.40 E-value=5.8 Score=41.62 Aligned_cols=70 Identities=11% Similarity=-0.008 Sum_probs=41.7
Q ss_pred CcHHHHHHHHhhC------CCCCCcEEEEcCC---hhHHHHhhccCc------------------------cCCCcEEEE
Q 024003 196 PKVNVLKQLQKKP------EHQGLRLHFVEDR---LATLKNVIKEPE------------------------LDGWNLYLV 242 (274)
Q Consensus 196 pkp~~l~~~l~~l------~~~~~~~l~VGDs---~~Di~aA~~~~~------------------------~Agv~~i~v 242 (274)
.|-..+..+++++ +..++=++.|||- .=||-.+..... ..+-.+++|
T Consensus 678 nKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 757 (797)
T PLN03063 678 TKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSC 757 (797)
T ss_pred ChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEE
Confidence 6778888888865 2345668889994 356766553110 001234677
Q ss_pred eCCCCChHHHHhcCCCCCceeechhHHHhhc
Q 024003 243 DWGYNTPKERAEAASMPRIQLLQLSDFCTKL 273 (274)
Q Consensus 243 ~wGy~~~~~l~~a~~~P~~~~~~~~~~~~~~ 273 (274)
+-|-.. ..|. +.+.++.++.+.|
T Consensus 758 ~VG~~~------s~A~--y~l~~~~eV~~lL 780 (797)
T PLN03063 758 AIGQAR------TKAR--YVLDSSNDVVSLL 780 (797)
T ss_pred EECCCC------ccCe--ecCCCHHHHHHHH
Confidence 778531 2233 7788888776655
No 263
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=61.98 E-value=16 Score=32.26 Aligned_cols=46 Identities=20% Similarity=0.235 Sum_probs=37.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEec
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 191 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g 191 (274)
+.-|-..+.|+ ++|++++|+|+.+-..+..+++. +++..++-..-|
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~-l~~~~~~I~~NG 68 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEE-LGLDGPLITFNG 68 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCccEEEeCC
Confidence 46677888887 89999999999999999999997 999864333334
No 264
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=61.89 E-value=4.7 Score=33.68 Aligned_cols=14 Identities=21% Similarity=0.145 Sum_probs=12.4
Q ss_pred ceEEEecCcccccC
Q 024003 3 DLYALDFDGVICDS 16 (274)
Q Consensus 3 ~~ilFDlDGTLvDS 16 (274)
++|+||+||||.+.
T Consensus 26 ~~vv~D~Dgtl~~~ 39 (170)
T TIGR01668 26 KGVVLDKDNTLVYP 39 (170)
T ss_pred CEEEEecCCccccC
Confidence 78999999999954
No 265
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=61.53 E-value=13 Score=38.02 Aligned_cols=84 Identities=15% Similarity=0.093 Sum_probs=55.2
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCC-CCC-ceEecCCCCCcHHHHHHHHhhCC-CCCCcEEE
Q 024003 143 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGTGPKVNVLKQLQKKPE-HQGLRLHF 217 (274)
Q Consensus 143 ~~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~-~~f-~~v~g~~~~pkp~~l~~~l~~l~-~~~~~~l~ 217 (274)
.+++=|++.|+|+ .+=+.|.|+|--.+.+|..+++ ...-+ .|| +.|++.+..|+-..+. +..++ ..+..++.
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~-liDP~~~lF~dRIisrde~~~~kt~d--L~~~~p~g~smvvI 275 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAK-LIDPEGKYFGDRIISRDESPFFKTLD--LVLLFPCGDSMVVI 275 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHH-HhCCCCccccceEEEecCCCcccccc--cccCCCCCCccEEE
Confidence 4678899999999 7789999999999999999999 45553 455 7888876533322221 11222 23334566
Q ss_pred EcCChhHHHHhh
Q 024003 218 VEDRLATLKNVI 229 (274)
Q Consensus 218 VGDs~~Di~aA~ 229 (274)
|.|+..=+.-+.
T Consensus 276 IDDr~dVW~~~~ 287 (635)
T KOG0323|consen 276 IDDRSDVWPDHK 287 (635)
T ss_pred EeCccccccCCC
Confidence 666654444444
No 266
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=60.73 E-value=16 Score=32.14 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=31.4
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEec
Q 024003 148 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 191 (274)
Q Consensus 148 pGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g 191 (274)
|...++++ ++|++++++|+++...++.+++. +++.. .+.+++
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~-~~~~~-p~~~I~ 68 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQ-KPLLT-PDIWVT 68 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhc-CCCCC-CCEEEE
Confidence 34444554 78999999999999999999996 88754 444443
No 267
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=60.47 E-value=20 Score=31.98 Aligned_cols=38 Identities=13% Similarity=0.104 Sum_probs=32.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
...+-..+.|. ++|++++++|+++...+..+++. +|++
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQT-LGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCC
Confidence 34566767776 79999999999999999999997 8885
No 268
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=60.46 E-value=4.5 Score=43.06 Aligned_cols=74 Identities=9% Similarity=0.072 Sum_probs=41.1
Q ss_pred hCCCcEEEEcCCc-hHH----HHHHHHHHh--CC--CCCCceEecCC------CC-CcHHHHHHHHhhCC------CCCC
Q 024003 156 LASSRIYIVTSNQ-SRF----VETLLRELA--GV--TITPDRLYGLG------TG-PKVNVLKQLQKKPE------HQGL 213 (274)
Q Consensus 156 ~~g~~laIvTnK~-~~~----~~~iL~~~~--gl--~~~f~~v~g~~------~~-pkp~~l~~~l~~l~------~~~~ 213 (274)
.++.-++.=.-+. .++ ++.++.+ + +. ..-++.+-|.. .+ .|-..+..+++++. ..++
T Consensus 713 ~K~~SLawHYR~ADpe~g~~qA~el~~~-L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~D 791 (934)
T PLN03064 713 TRETSLVWNYKYADVEFGRLQARDMLQH-LWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPID 791 (934)
T ss_pred EcCcEEEEEecCCChhhHHHHHHHHHHH-HHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCC
Confidence 4555555555332 233 5556553 3 11 11245555543 12 67778888877652 2355
Q ss_pred cEEEEcC--C-hhHHHHhhc
Q 024003 214 RLHFVED--R-LATLKNVIK 230 (274)
Q Consensus 214 ~~l~VGD--s-~~Di~aA~~ 230 (274)
=++.||| + .-||-.+.+
T Consensus 792 Fvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 792 YVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred EEEEeCCCCCCcHHHHHHHh
Confidence 5888898 2 466887776
No 269
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=59.42 E-value=41 Score=28.18 Aligned_cols=86 Identities=12% Similarity=0.067 Sum_probs=50.4
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHHh-----CCCCCCceEecC----------CC-CCcHHH---
Q 024003 146 LYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELA-----GVTITPDRLYGL----------GT-GPKVNV--- 200 (274)
Q Consensus 146 lypGv~e~L~---~~g~~laIvTnK~~~~---~~~iL~~~~-----gl~~~f~~v~g~----------~~-~pkp~~--- 200 (274)
..|||.++.. ++||++.-+|+.|... ++.-|++ . ++- .--|+.. +. .++|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~-~~q~~~~lP--~Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQ-HQQQGHNLP--DGPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHH-HHhCCccCC--CCCEEECCcchhhhhhccccccChHHHHH
Confidence 3489999998 8999999999999554 4455554 3 221 1122222 11 145543
Q ss_pred --HHHHHhhCCCCCC-cEEEEcCChhHHHHhhccCccCCCc
Q 024003 201 --LKQLQKKPEHQGL-RLHFVEDRLATLKNVIKEPELDGWN 238 (274)
Q Consensus 201 --l~~~l~~l~~~~~-~~l~VGDs~~Di~aA~~~~~~Agv~ 238 (274)
|..+...+..... =..-.|.+.+|+.+=++ +|++
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~----vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKA----VGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHH----cCCC
Confidence 3333332221111 12336899999999887 6776
No 270
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=58.97 E-value=5.2 Score=33.87 Aligned_cols=12 Identities=17% Similarity=0.260 Sum_probs=11.4
Q ss_pred ceEEEecCcccc
Q 024003 3 DLYALDFDGVIC 14 (274)
Q Consensus 3 ~~ilFDlDGTLv 14 (274)
|+|+||+|.||+
T Consensus 42 k~li~DkDNTL~ 53 (168)
T PF09419_consen 42 KALIFDKDNTLT 53 (168)
T ss_pred eEEEEcCCCCCC
Confidence 799999999997
No 271
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=58.64 E-value=15 Score=25.97 Aligned_cols=30 Identities=20% Similarity=-0.014 Sum_probs=23.6
Q ss_pred CCceEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 1 MEDLYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
|+.-|+||=|+.-+||+- +..++.++++.+
T Consensus 23 ~es~iiFDNded~tdSa~-llp~ie~a~~~~ 52 (65)
T PF06117_consen 23 CESDIIFDNDEDKTDSAA-LLPAIEQARADV 52 (65)
T ss_pred CCCCeeecCCCcccchHH-HHHHHHHHHHHH
Confidence 346799999999999987 666777666665
No 272
>PRK10976 putative hydrolase; Provisional
Probab=58.56 E-value=18 Score=31.97 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=33.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
.+=|...+.|+ ++|++++|+|+.+...+..+++. ++++.+
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDN-LEIKSY 61 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCe
Confidence 34566777777 79999999999999999999996 888654
No 273
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=57.84 E-value=5.9 Score=36.59 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=14.2
Q ss_pred CceEEEecCcccccCH
Q 024003 2 EDLYALDFDGVICDSC 17 (274)
Q Consensus 2 ~~~ilFDlDGTLvDS~ 17 (274)
.|+|+||||.||....
T Consensus 3 ~k~~v~DlDnTlw~gv 18 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGV 18 (320)
T ss_pred eEEEEEcCCCCCCCCE
Confidence 5899999999998875
No 274
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=55.40 E-value=5 Score=33.22 Aligned_cols=69 Identities=19% Similarity=0.146 Sum_probs=45.0
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCC---chHH---HHHHHHHHhCCCCCCceEecCCCC-CcHHHHHHHHhhCCCCCCc
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSN---QSRF---VETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLR 214 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK---~~~~---~~~iL~~~~gl~~~f~~v~g~~~~-pkp~~l~~~l~~l~~~~~~ 214 (274)
-..-|+..+.++ -.-+.+.|||.. |..+ -+=+++ .|..-.+--.|+|+..+ -|. +
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E-~FPFi~~qn~vfCgnKnivka------------D--- 130 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKE-KFPFISYQNIVFCGNKNIVKA------------D--- 130 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHH-HCCCCChhhEEEecCCCeEEe------------e---
Confidence 456789999998 677889999865 3332 233556 37776676777776521 111 1
Q ss_pred EEEEcCChhHHHHhh
Q 024003 215 LHFVEDRLATLKNVI 229 (274)
Q Consensus 215 ~l~VGDs~~Di~aA~ 229 (274)
++|.|.+..++.=+
T Consensus 131 -ilIDDnp~nLE~F~ 144 (180)
T COG4502 131 -ILIDDNPLNLENFK 144 (180)
T ss_pred -EEecCCchhhhhcc
Confidence 78888888877554
No 275
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=52.76 E-value=15 Score=30.90 Aligned_cols=47 Identities=15% Similarity=0.034 Sum_probs=29.9
Q ss_pred cHHHHHHHHhh-CCCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEEeCCCC
Q 024003 197 KVNVLKQLQKK-PEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 197 kp~~l~~~l~~-l~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v~wGy~ 247 (274)
..+.+.+.... .=..++|++||||+. .||..|.. .|--.|+..=|-+
T Consensus 123 t~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~----mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 123 TAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANR----MGSLGVWTEPGVR 171 (190)
T ss_pred cHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhh----ccceeEEeccccc
Confidence 34555544321 126789999999997 79999986 4544455544543
No 276
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=51.61 E-value=61 Score=32.05 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=73.6
Q ss_pred cCCCCCCCccHH--HHHH---hCCCcEEEEcC--CchHHHHHHHHHHhCCCCCCceEecC-C---CCCcHHHHHHHHhhC
Q 024003 140 WIGANRLYPGVS--DALK---LASSRIYIVTS--NQSRFVETLLRELAGVTITPDRLYGL-G---TGPKVNVLKQLQKKP 208 (274)
Q Consensus 140 ~~~~~~lypGv~--e~L~---~~g~~laIvTn--K~~~~~~~iL~~~~gl~~~f~~v~g~-~---~~pkp~~l~~~l~~l 208 (274)
......+||... |+.+ +.|.++.++|- =|.+..+.+|.. +|.+.+---|+-+ + +|..-.....+++.-
T Consensus 92 ~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s-~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~E 170 (635)
T COG5610 92 NTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNS-FGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLE 170 (635)
T ss_pred ccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHh-cCCCccCceeeecceeehhcccchHHHHHHhhc
Confidence 345568999754 5555 78999999996 578888999997 9988664445543 3 346667778888878
Q ss_pred CCCCCcEEEEcCCh-hHHHHhhccCccCCCcEEEE
Q 024003 209 EHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 209 ~~~~~~~l~VGDs~-~Di~aA~~~~~~Agv~~i~v 242 (274)
+++|...+-|||.. .|+..+++ -|+.+...
T Consensus 171 nVd~~~w~H~GDN~~aD~l~pk~----LgI~Tlf~ 201 (635)
T COG5610 171 NVDPKKWIHCGDNWVADYLKPKN----LGISTLFY 201 (635)
T ss_pred CCChhheEEecCchhhhhcCccc----cchhHHHH
Confidence 99999999999975 58888887 67766554
No 277
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=50.42 E-value=25 Score=37.29 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=14.3
Q ss_pred CCceEEEecCcccccCH
Q 024003 1 MEDLYALDFDGVICDSC 17 (274)
Q Consensus 1 m~~~ilFDlDGTLvDS~ 17 (274)
|.++|+||+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 35899999999999665
No 278
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=50.38 E-value=23 Score=32.85 Aligned_cols=38 Identities=26% Similarity=0.572 Sum_probs=31.5
Q ss_pred cCCCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH
Q 024003 140 WIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE 178 (274)
Q Consensus 140 ~~~~~~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~ 178 (274)
|. ...+-||+.|.|+ +.|.++.+|||.+...-+...++
T Consensus 34 W~-g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK 74 (306)
T KOG2882|consen 34 WL-GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKK 74 (306)
T ss_pred ee-cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHH
Confidence 44 4688999999999 89999999999988777776663
No 279
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=49.93 E-value=29 Score=33.39 Aligned_cols=91 Identities=20% Similarity=0.262 Sum_probs=58.3
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHHhCCCC-CCceEecCC-CCCcHHHHHHHHh
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTI-TPDRLYGLG-TGPKVNVLKQLQK 206 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~------------~~~~iL~~~~gl~~-~f~~v~g~~-~~pkp~~l~~~l~ 206 (274)
..+||-+..=|. +.||++.|.||+... -++.++.+ +|+.. .+..++... .||-.-+....++
T Consensus 103 ~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~an-l~vPi~~~~A~~~~~yRKP~tGMwe~~~~ 181 (422)
T KOG2134|consen 103 RILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVAN-LGVPIQLLAAIIKGKYRKPSTGMWEFLKR 181 (422)
T ss_pred eeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHh-cCCceEEeeeccCCcccCcchhHHHHHHH
Confidence 468999998888 899999999998643 24455664 55531 112222221 3477778777775
Q ss_pred hCC----CCCCcEEEEcCC---------------hhHHHHhhccCccCCCcE
Q 024003 207 KPE----HQGLRLHFVEDR---------------LATLKNVIKEPELDGWNL 239 (274)
Q Consensus 207 ~l~----~~~~~~l~VGDs---------------~~Di~aA~~~~~~Agv~~ 239 (274)
... +.-..++||||. ..|+.-|.| +|+++
T Consensus 182 ~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN----~gvkF 229 (422)
T KOG2134|consen 182 LENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAAN----AGVKF 229 (422)
T ss_pred HhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHh----cCCcc
Confidence 543 444566799883 457777776 67664
No 280
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=49.07 E-value=10 Score=34.42 Aligned_cols=92 Identities=11% Similarity=0.014 Sum_probs=52.6
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCC-CCCCceEecCCCC-CcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 144 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 144 ~~lypGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl-~~~f~~v~g~~~~-pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
+.-.||+.|.|+ .+-+.+.|-|.--+.++.+++.. +.- ...|..-+=.+.- -+.-...+-+..+|-+..++++|.
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~-LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiD 208 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDI-LDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVD 208 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHH-ccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEc
Confidence 456688888888 55577888888888888888884 432 1112111111100 000011111134556677889998
Q ss_pred CChhHHHHhhccCccCCCcEE
Q 024003 220 DRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 220 Ds~~Di~aA~~~~~~Agv~~i 240 (274)
|++.=...=-+ +|||+-
T Consensus 209 NsP~sy~~~p~----NgIpI~ 225 (262)
T KOG1605|consen 209 NSPQSYRLQPE----NGIPIK 225 (262)
T ss_pred CChHHhccCcc----CCCccc
Confidence 88877655443 677764
No 281
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=46.58 E-value=11 Score=31.68 Aligned_cols=54 Identities=15% Similarity=0.230 Sum_probs=31.3
Q ss_pred EEcCCchHHHHHHHHHHhCC----CCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCC
Q 024003 163 IVTSNQSRFVETLLRELAGV----TITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 221 (274)
Q Consensus 163 IvTnK~~~~~~~iL~~~~gl----~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs 221 (274)
+++-+++++=...|+....+ ...|-.-+|. ...++..+ ++.|++++++..||-.
T Consensus 94 vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN---~~tDv~aY--~~vGip~~rIF~I~~~ 151 (157)
T PF08235_consen 94 VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGN---RSTDVIAY--KAVGIPKSRIFIINPK 151 (157)
T ss_pred ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCC---cHHHHHHH--HHcCCChhhEEEECCC
Confidence 44668888877777752122 1222233332 23444433 4679999999888753
No 282
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=46.18 E-value=1.1e+02 Score=28.24 Aligned_cols=85 Identities=16% Similarity=0.045 Sum_probs=51.0
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcH----HHHHHHHhhC-CCCCCcEEEEcCChhHHHHhhccCccC
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKV----NVLKQLQKKP-EHQGLRLHFVEDRLATLKNVIKEPELD 235 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp----~~l~~~l~~l-~~~~~~~l~VGDs~~Di~aA~~~~~~A 235 (274)
..|+|+-.......+++. |++..-++..+|....... ..+..+.+.+ ...|+=++..||+..-+.++.. +...
T Consensus 32 ~~~~tg~h~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~a-a~~~ 109 (365)
T TIGR00236 32 YVIVTAQHREMLDQVLDL-FHLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALA-AFYL 109 (365)
T ss_pred EEEEeCCCHHHHHHHHHh-cCCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHH-HHHh
Confidence 478888888888999986 9997444445554211212 2222222222 3447777888998665544432 2238
Q ss_pred CCcEEEEeCCCC
Q 024003 236 GWNLYLVDWGYN 247 (274)
Q Consensus 236 gv~~i~v~wGy~ 247 (274)
|+|++-+..|-.
T Consensus 110 ~ipv~h~~~g~~ 121 (365)
T TIGR00236 110 QIPVGHVEAGLR 121 (365)
T ss_pred CCCEEEEeCCCC
Confidence 999998876653
No 283
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=45.74 E-value=64 Score=31.05 Aligned_cols=79 Identities=13% Similarity=0.147 Sum_probs=54.1
Q ss_pred CCCcEEEEcCCch-HHHHHHHHHHhCCCCCC--ceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc
Q 024003 157 ASSRIYIVTSNQS-RFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 157 ~g~~laIvTnK~~-~~~~~iL~~~~gl~~~f--~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
.++-=.+|||..- ..+-++| ++||...| +-|+....--|-..++++.+++|- +-..+.|||..---.+||+
T Consensus 369 ~ncvnVlvTttqLipalaKvL--L~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~--- 442 (468)
T KOG3107|consen 369 KNCVNVLVTTTQLIPALAKVL--LYGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKA--- 442 (468)
T ss_pred cceeEEEEeccchhHHHHHHH--HHhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHh---
Confidence 3444456666543 3334444 26776554 456554322788899999999997 5678889999888889987
Q ss_pred cCCCcEEEE
Q 024003 234 LDGWNLYLV 242 (274)
Q Consensus 234 ~Agv~~i~v 242 (274)
-+||++=.
T Consensus 443 -ln~PfwrI 450 (468)
T KOG3107|consen 443 -LNMPFWRI 450 (468)
T ss_pred -hCCceEee
Confidence 78998665
No 284
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=45.67 E-value=1.1e+02 Score=30.81 Aligned_cols=81 Identities=15% Similarity=0.033 Sum_probs=47.6
Q ss_pred HHHHHH---hCCCcEEEEcCCchH-HHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 150 VSDALK---LASSRIYIVTSNQSR-FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 150 v~e~L~---~~g~~laIvTnK~~~-~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
|...|. +.+-+++||+-.... .++.+-+ .++++...-.+... -+.+....-+++.|+. +.|||... .
T Consensus 96 il~al~~a~~~~~~iavv~~~~~~~~~~~~~~-~l~~~i~~~~~~~~---~e~~~~v~~lk~~G~~----~vvG~~~~-~ 166 (538)
T PRK15424 96 VMQALARARKLTSSIGVVTYQETIPALVAFQK-TFNLRIEQRSYVTE---EDARGQINELKANGIE----AVVGAGLI-T 166 (538)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHH-HhCCceEEEEecCH---HHHHHHHHHHHHCCCC----EEEcCchH-H
Confidence 444454 455688999865443 4444444 46665322222111 2333444445566777 89999876 6
Q ss_pred HHhhccCccCCCcEEEEe
Q 024003 226 KNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 226 ~aA~~~~~~Agv~~i~v~ 243 (274)
..|++ +|++.+...
T Consensus 167 ~~A~~----~g~~g~~~~ 180 (538)
T PRK15424 167 DLAEE----AGMTGIFIY 180 (538)
T ss_pred HHHHH----hCCceEEec
Confidence 77776 899988875
No 285
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=45.31 E-value=61 Score=29.91 Aligned_cols=80 Identities=21% Similarity=0.189 Sum_probs=59.2
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEE
Q 024003 161 IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 240 (274)
Q Consensus 161 laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i 240 (274)
+.-+|...+..++.+..+ .. +-.|+|+..-.+..-|.++.++.|. .+..| |+..||...- ..|+.+|
T Consensus 195 ICyAT~nRQ~Avk~la~~-~D----l~iVVG~~nSSNs~rL~eiA~~~g~---~aylI-d~~~ei~~~w----~~~~~~V 261 (294)
T COG0761 195 ICYATQNRQDAVKELAPE-VD----LVIVVGSKNSSNSNRLAEIAKRHGK---PAYLI-DDAEEIDPEW----LKGVKTV 261 (294)
T ss_pred cchhhhhHHHHHHHHhhc-CC----EEEEECCCCCccHHHHHHHHHHhCC---CeEEe-CChHhCCHHH----hcCccEE
Confidence 677888888888777764 32 2457786544677788888888887 34666 6667887655 3789999
Q ss_pred EEeCCCCChHHHH
Q 024003 241 LVDWGYNTPKERA 253 (274)
Q Consensus 241 ~v~wGy~~~~~l~ 253 (274)
||+=|-.+++.+-
T Consensus 262 GvTAGAStPd~lV 274 (294)
T COG0761 262 GVTAGASTPDWLV 274 (294)
T ss_pred EEecCCCCCHHHH
Confidence 9999998887763
No 286
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=44.62 E-value=96 Score=31.01 Aligned_cols=83 Identities=13% Similarity=0.025 Sum_probs=48.4
Q ss_pred HHHHHH---hCCCcEEEEcCCchH-HHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 150 VSDALK---LASSRIYIVTSNQSR-FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 150 v~e~L~---~~g~~laIvTnK~~~-~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
|...|. ..+-+++||+-.... .++.+-+ .++++...-.+.. .-+.+....-+++.|+. +.|||... .
T Consensus 86 il~al~~a~~~~~~ia~vg~~~~~~~~~~~~~-ll~~~i~~~~~~~---~~e~~~~~~~l~~~G~~----~viG~~~~-~ 156 (526)
T TIGR02329 86 VMQALARARRIASSIGVVTHQDTPPALRRFQA-AFNLDIVQRSYVT---EEDARSCVNDLRARGIG----AVVGAGLI-T 156 (526)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHH-HhCCceEEEEecC---HHHHHHHHHHHHHCCCC----EEECChHH-H
Confidence 444454 445688999865443 3444444 4666532222211 12333333445556776 89999966 5
Q ss_pred HHhhccCccCCCcEEEEeCC
Q 024003 226 KNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 226 ~aA~~~~~~Agv~~i~v~wG 245 (274)
..|++ +|++.|.++-|
T Consensus 157 ~~A~~----~gl~~ili~s~ 172 (526)
T TIGR02329 157 DLAEQ----AGLHGVFLYSA 172 (526)
T ss_pred HHHHH----cCCceEEEecH
Confidence 66666 89999999655
No 287
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=44.60 E-value=12 Score=32.12 Aligned_cols=24 Identities=13% Similarity=0.263 Sum_probs=17.7
Q ss_pred chHHHHHHHHHHhCCCCCCceEecC
Q 024003 168 QSRFVETLLRELAGVTITPDRLYGL 192 (274)
Q Consensus 168 ~~~~~~~iL~~~~gl~~~f~~v~g~ 192 (274)
...+....+++ ++++.-...++|.
T Consensus 107 ~~gm~~~~~~~-~~iD~~~s~~VGD 130 (181)
T COG0241 107 KPGMLLSALKE-YNIDLSRSYVVGD 130 (181)
T ss_pred ChHHHHHHHHH-hCCCccceEEecC
Confidence 34567778885 8888777888884
No 288
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=42.53 E-value=1.4e+02 Score=26.80 Aligned_cols=92 Identities=15% Similarity=0.172 Sum_probs=62.1
Q ss_pred CCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCC----CC-CcHHHHHHHHhhCCC
Q 024003 142 GANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TG-PKVNVLKQLQKKPEH 210 (274)
Q Consensus 142 ~~~~lypGv~e~L~------~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~----~~-pkp~~l~~~l~~l~~ 210 (274)
+...|+|...|+|+ +.|+.+.--+|-.-..++++.+ .|-.- -.-.|+. .+ -.|..|..++++..+
T Consensus 101 D~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~d--~Gcaa--vMPlgsPIGSg~Gi~n~~~l~~i~~~~~v 176 (247)
T PF05690_consen 101 DDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLED--AGCAA--VMPLGSPIGSGRGIQNPYNLRIIIERADV 176 (247)
T ss_dssp -TTT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHHH--TT-SE--BEEBSSSTTT---SSTHHHHHHHHHHGSS
T ss_pred CCCCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--CCCCE--EEecccccccCcCCCCHHHHHHHHHhcCC
Confidence 34578999999999 7999999999999999999887 56531 1122332 23 789999999999988
Q ss_pred CCCcEEEEcC---ChhHHHHhhccCccCCCcEEEEeCC
Q 024003 211 QGLRLHFVED---RLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 211 ~~~~~l~VGD---s~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
+ +.|.= ++.|..-|.+ .|+..|.|...
T Consensus 177 P----vIvDAGiG~pSdaa~AME----lG~daVLvNTA 206 (247)
T PF05690_consen 177 P----VIVDAGIGTPSDAAQAME----LGADAVLVNTA 206 (247)
T ss_dssp S----BEEES---SHHHHHHHHH----TT-SEEEESHH
T ss_pred c----EEEeCCCCCHHHHHHHHH----cCCceeehhhH
Confidence 7 66642 5788888887 78888988544
No 289
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=41.77 E-value=61 Score=29.99 Aligned_cols=42 Identities=29% Similarity=0.592 Sum_probs=31.4
Q ss_pred CCCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHHhCCCCCCceEe
Q 024003 142 GANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLY 190 (274)
Q Consensus 142 ~~~~lypGv~e~L~---~~g-~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~ 190 (274)
..-.|||...|+++ +.| ++++||||-.. ..+++. +. .+|.++
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~-L~---~~dql~ 134 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEE-LK---LPDQLY 134 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHH-hc---cCCEEE
Confidence 34579999999999 788 79999999998 455554 32 345555
No 290
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=40.25 E-value=19 Score=33.22 Aligned_cols=16 Identities=13% Similarity=0.289 Sum_probs=13.5
Q ss_pred ceEEEecCcccccCHH
Q 024003 3 DLYALDFDGVICDSCE 18 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~ 18 (274)
..|+||||-||+.+..
T Consensus 123 hVIVfDlD~TLItd~~ 138 (297)
T PF05152_consen 123 HVIVFDLDSTLITDEG 138 (297)
T ss_pred cEEEEECCCcccccCC
Confidence 6899999999996644
No 291
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=40.20 E-value=18 Score=32.64 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=13.8
Q ss_pred ceEEEecCcccccCHH
Q 024003 3 DLYALDFDGVICDSCE 18 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~ 18 (274)
++++||+||||.+...
T Consensus 159 ~~~~~D~dgtl~~~~~ 174 (300)
T PHA02530 159 KAVIFDIDGTLAKMGG 174 (300)
T ss_pred CEEEEECCCcCcCCCC
Confidence 5899999999999753
No 292
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.01 E-value=3e+02 Score=25.24 Aligned_cols=122 Identities=10% Similarity=0.089 Sum_probs=70.0
Q ss_pred hhccCHHHHHHHHHHHHHHHHhhhhcccCCCCCCCccHHHH---HHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceE
Q 024003 113 EWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDA---LKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRL 189 (274)
Q Consensus 113 ~~~~~~~~~~~~~~~~r~~~~~~y~~~~~~~~~lypGv~e~---L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v 189 (274)
+.+++..++++.+.++.-.++ .|..++ |+++++++.|.|.---..++.++.+..++.. +..+
T Consensus 120 q~~f~k~~I~~~Va~s~i~lR--------------eg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n~k~ 184 (298)
T KOG3128|consen 120 QGGFSKNAIDDIVAESNIALR--------------EGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-NVKF 184 (298)
T ss_pred cCCcCHHHHHHHHHHhhHHHH--------------HHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-cHHh
Confidence 334555555555554444333 444444 4489999999999988888888886444332 3333
Q ss_pred ecC------------CCC-------CcHHHHHHHHhhCC--CCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 190 YGL------------GTG-------PKVNVLKQLQKKPE--HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 190 ~g~------------~~~-------pkp~~l~~~l~~l~--~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
++. -.+ .....+....+.+. .....+++-|||..|+.+|--.+ +--+..-+.|+...
T Consensus 185 vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~--~~~~iLkig~l~d~ 262 (298)
T KOG3128|consen 185 VSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGVP--RVGHILKIGYLNDS 262 (298)
T ss_pred hhhhhhhcccchhhhhhHHHHHHHccchHHHHhhhHHHhhccCCceEEEeccccccchhhcCCc--ccccceeeecccch
Confidence 221 000 12223333344332 34678999999999999886321 22234456677666
Q ss_pred hHH
Q 024003 249 PKE 251 (274)
Q Consensus 249 ~~~ 251 (274)
.++
T Consensus 263 vee 265 (298)
T KOG3128|consen 263 VEE 265 (298)
T ss_pred HHH
Confidence 555
No 293
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=39.42 E-value=16 Score=30.97 Aligned_cols=12 Identities=25% Similarity=0.357 Sum_probs=11.4
Q ss_pred ceEEEecCcccc
Q 024003 3 DLYALDFDGVIC 14 (274)
Q Consensus 3 ~~ilFDlDGTLv 14 (274)
+.|++|||-|||
T Consensus 29 kgvi~DlDNTLv 40 (175)
T COG2179 29 KGVILDLDNTLV 40 (175)
T ss_pred cEEEEeccCcee
Confidence 789999999998
No 294
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=37.53 E-value=57 Score=33.78 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=32.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 185 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~ 185 (274)
..++-..+.|+ ++|++++++|+++...+..+++. +++..+
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~-Lgl~~~ 475 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNE-LGIKDP 475 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCCe
Confidence 35555667776 79999999999999999999996 887543
No 295
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=37.42 E-value=94 Score=24.88 Aligned_cols=28 Identities=21% Similarity=0.125 Sum_probs=24.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHH
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQSRF 171 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~~~~ 171 (274)
..+.+++.+.|+ ++|+.+.++|+.+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 457889999997 7899999999998764
No 296
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=37.35 E-value=81 Score=29.35 Aligned_cols=27 Identities=19% Similarity=0.384 Sum_probs=22.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch
Q 024003 143 ANRLYPGVSDALK---LASSRIYIVTSNQS 169 (274)
Q Consensus 143 ~~~lypGv~e~L~---~~g~~laIvTnK~~ 169 (274)
...+||.+.++++ ++|+.++|.||-..
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~ 169 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTR 169 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCC
Confidence 3457899999999 78999999999855
No 297
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=36.85 E-value=1.2e+02 Score=32.34 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=62.3
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCC---------------CCc----------eEecCCCC-CcH
Q 024003 148 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI---------------TPD----------RLYGLGTG-PKV 198 (274)
Q Consensus 148 pGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~---------------~f~----------~v~g~~~~-pkp 198 (274)
+.|.+... ++|+++.+||.-....++.+-+. -||-. ..+ .|.|.+-+ -.+
T Consensus 593 ~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~-vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~ 671 (1019)
T KOG0203|consen 593 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKS-VGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSS 671 (1019)
T ss_pred ccCchhhhhhhhhCceEEEEecCccchhhhhhhh-eeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCH
Confidence 44455444 69999999999887777777665 56321 011 13344322 345
Q ss_pred HHHHHHHhhCC------CCCCc--------------EEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChHHHHhc
Q 024003 199 NVLKQLQKKPE------HQGLR--------------LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA 255 (274)
Q Consensus 199 ~~l~~~l~~l~------~~~~~--------------~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l~~a 255 (274)
+.+.++++... .+|++ +-..||+.||-=|=|+ |. |||.-|+...+.-+++
T Consensus 672 ~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKK----AD---IGVAMGiaGSDvsKqA 741 (1019)
T KOG0203|consen 672 EQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKK----AD---IGVAMGIAGSDVSKQA 741 (1019)
T ss_pred HHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcc----cc---cceeeccccchHHHhh
Confidence 56666665432 23433 3456999999998887 44 8899999776544443
No 298
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=36.05 E-value=65 Score=27.38 Aligned_cols=77 Identities=16% Similarity=0.100 Sum_probs=34.0
Q ss_pred CCCCCCCccHHHHHHhCCCcEEEEcCCchHHH-------HHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCC
Q 024003 141 IGANRLYPGVSDALKLASSRIYIVTSNQSRFV-------ETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGL 213 (274)
Q Consensus 141 ~~~~~lypGv~e~L~~~g~~laIvTnK~~~~~-------~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~ 213 (274)
...+.+.|+....+.++|++++++...-.+.. ..+.+. +-..||.|+..+ . .-.+-+.++|++++
T Consensus 101 ~~EtElWPnll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~---~l~~f~~i~aqs----~-~da~r~~~lG~~~~ 172 (186)
T PF04413_consen 101 WVETELWPNLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRP---LLSRFDRILAQS----E-ADAERFRKLGAPPE 172 (186)
T ss_dssp EES----HHHHHH-----S-EEEEEE--------------HHHHH---HGGG-SEEEESS----H-HHHHHHHTTT-S--
T ss_pred EEccccCHHHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHH---HHHhCCEEEECC----H-HHHHHHHHcCCCcc
Confidence 44678999888888899999999976544322 112221 223578887654 2 22344678999999
Q ss_pred cEEEEcCChhHH
Q 024003 214 RLHFVEDRLATL 225 (274)
Q Consensus 214 ~~l~VGDs~~Di 225 (274)
++...|+-..|+
T Consensus 173 ~v~v~GnlKfd~ 184 (186)
T PF04413_consen 173 RVHVTGNLKFDQ 184 (186)
T ss_dssp SEEE---GGG--
T ss_pred eEEEeCcchhcc
Confidence 999999998885
No 299
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=35.84 E-value=1.3e+02 Score=28.33 Aligned_cols=89 Identities=12% Similarity=0.058 Sum_probs=53.1
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHH----------HHHHHHhhCCCCC
Q 024003 143 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVN----------VLKQLQKKPEHQG 212 (274)
Q Consensus 143 ~~~lypGv~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~----------~l~~~l~~l~~~~ 212 (274)
+..+|-++..-|+++|+.+.|.| .....+..+|+. +|++. .++|........ -+.++.. ...|
T Consensus 12 hvhfFk~~I~eL~~~GheV~it~-R~~~~~~~LL~~-yg~~y---~~iG~~g~~~~~Kl~~~~~R~~~l~~~~~--~~~p 84 (335)
T PF04007_consen 12 HVHFFKNIIRELEKRGHEVLITA-RDKDETEELLDL-YGIDY---IVIGKHGDSLYGKLLESIERQYKLLKLIK--KFKP 84 (335)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEE-eccchHHHHHHH-cCCCe---EEEcCCCCCHHHHHHHHHHHHHHHHHHHH--hhCC
Confidence 35688888998988898765544 455678889995 88862 355653221111 1122222 2345
Q ss_pred CcEEEEcCChhHHH-HhhccCccCCCcEEEEeC
Q 024003 213 LRLHFVEDRLATLK-NVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 213 ~~~l~VGDs~~Di~-aA~~~~~~Agv~~i~v~w 244 (274)
+ ++|+=+..+.- .|.- .|+|+|.+.=
T Consensus 85 D--v~is~~s~~a~~va~~----lgiP~I~f~D 111 (335)
T PF04007_consen 85 D--VAISFGSPEAARVAFG----LGIPSIVFND 111 (335)
T ss_pred C--EEEecCcHHHHHHHHH----hCCCeEEEec
Confidence 4 66654444444 5554 7899988754
No 300
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=35.71 E-value=14 Score=26.99 Aligned_cols=10 Identities=40% Similarity=0.783 Sum_probs=8.7
Q ss_pred EEEecCcccc
Q 024003 5 YALDFDGVIC 14 (274)
Q Consensus 5 ilFDlDGTLv 14 (274)
+=|||+|.|+
T Consensus 3 ~RFdf~G~l~ 12 (73)
T PF08620_consen 3 LRFDFDGNLL 12 (73)
T ss_pred ccccCCCCEe
Confidence 3499999999
No 301
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=35.23 E-value=21 Score=34.91 Aligned_cols=14 Identities=36% Similarity=0.558 Sum_probs=12.5
Q ss_pred ceEEEecCcccccC
Q 024003 3 DLYALDFDGVICDS 16 (274)
Q Consensus 3 ~~ilFDlDGTLvDS 16 (274)
+.|+||.||||.-|
T Consensus 376 kiVVsDiDGTITkS 389 (580)
T COG5083 376 KIVVSDIDGTITKS 389 (580)
T ss_pred cEEEEecCCcEEeh
Confidence 78999999999765
No 302
>PTZ00445 p36-lilke protein; Provisional
Probab=34.87 E-value=16 Score=32.20 Aligned_cols=13 Identities=31% Similarity=0.393 Sum_probs=12.5
Q ss_pred ceEEEecCccccc
Q 024003 3 DLYALDFDGVICD 15 (274)
Q Consensus 3 ~~ilFDlDGTLvD 15 (274)
|+|++|||=||++
T Consensus 44 k~Va~D~DnTlI~ 56 (219)
T PTZ00445 44 KVIASDFDLTMIT 56 (219)
T ss_pred eEEEecchhhhhh
Confidence 7999999999998
No 303
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.47 E-value=2.5e+02 Score=24.73 Aligned_cols=78 Identities=19% Similarity=0.243 Sum_probs=50.4
Q ss_pred cEEEEc-CCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChh---------HHHHhh
Q 024003 160 RIYIVT-SNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLA---------TLKNVI 229 (274)
Q Consensus 160 ~laIvT-nK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~---------Di~aA~ 229 (274)
..+++| ++.-+.+..++++ ||+ ..|.|+..|--...+..+++.|. +..+++|.=|.+. =+.-|+
T Consensus 70 ~~amvS~s~DGEliA~~l~k-fG~----~~IRGSs~Kgg~~Alr~l~k~Lk-~G~~i~itpDgPkGp~~~~~~Gii~LA~ 143 (214)
T COG2121 70 IYAMVSPSRDGELIARLLEK-FGL----RVIRGSSNKGGISALRALLKALK-QGKSIAITPDGPKGPVHKIGDGIIALAQ 143 (214)
T ss_pred EEEEEcCCcCHHHHHHHHHH-cCc----eEEeccCCcchHHHHHHHHHHHh-CCCcEEEcCCCCCCCceeccchhhHhhH
Confidence 345555 7888999999996 987 57889876644455555555553 2234555555544 234455
Q ss_pred ccCccCCCcEEEEeCCCC
Q 024003 230 KEPELDGWNLYLVDWGYN 247 (274)
Q Consensus 230 ~~~~~Agv~~i~v~wGy~ 247 (274)
. .|+|.+-|.+-++
T Consensus 144 ~----sg~pi~pv~~~~s 157 (214)
T COG2121 144 K----SGVPIIPVGVATS 157 (214)
T ss_pred h----cCCCeEEEEEeee
Confidence 4 7888888866653
No 304
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=33.75 E-value=2.8e+02 Score=29.78 Aligned_cols=95 Identities=19% Similarity=0.203 Sum_probs=65.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCCCC---CceEecCCC---------C--CcH---------
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT---PDRLYGLGT---------G--PKV--------- 198 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~~~---f~~v~g~~~---------~--pkp--------- 198 (274)
+.=|||.+.++ .+|+++-.||.-.-..+++|-.+ .||... |-.+-|.+- + ||-
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~e-CGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARE-CGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHH-cccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 45699999999 79999999999999999999986 998532 334445441 0 222
Q ss_pred --HHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCChH
Q 024003 199 --NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 250 (274)
Q Consensus 199 --~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~ 250 (274)
..+-+.+++.| +=+..-||..||--|=|+ |. ||..-|...-+
T Consensus 726 DK~lLVk~L~~~g---~VVAVTGDGTNDaPALke----AD---VGlAMGIaGTe 769 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKE----AD---VGLAMGIAGTE 769 (1034)
T ss_pred hHHHHHHHHHhcC---cEEEEecCCCCCchhhhh----cc---cchhccccchh
Confidence 23334444333 234566999999999988 44 56677765443
No 305
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=33.74 E-value=1.9e+02 Score=23.59 Aligned_cols=78 Identities=12% Similarity=0.052 Sum_probs=49.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHHhCCCCC---------CceEecCCCCCcHHHHHHHHhhCCC
Q 024003 144 NRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTIT---------PDRLYGLGTGPKVNVLKQLQKKPEH 210 (274)
Q Consensus 144 ~~lypGv~e~L~---~~g~~laIvTnK~-~~~~~~iL~~~~gl~~~---------f~~v~g~~~~pkp~~l~~~l~~l~~ 210 (274)
...||.+.-.|. ++|++++++|+.. ...+...|+. |.+..- |+.+.-++ +.+-..+.++-+..+.
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~-fkvk~~Gvlkps~e~ft~~~~g~-gsklghfke~~n~s~~ 120 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLET-FKVKQTGVLKPSLEEFTFEAVGD-GSKLGHFKEFTNNSNS 120 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHH-hccCcccccchhhhcCceeeecC-cccchhHHHHhhccCc
Confidence 568888888877 8999999999755 4688889995 776532 22221111 2444555666665666
Q ss_pred CCCcEEEEcCChh
Q 024003 211 QGLRLHFVEDRLA 223 (274)
Q Consensus 211 ~~~~~l~VGDs~~ 223 (274)
.-.+..+..|-..
T Consensus 121 ~~k~~~~fdDesr 133 (144)
T KOG4549|consen 121 IEKNKQVFDDESR 133 (144)
T ss_pred chhceeeeccccc
Confidence 6556666666543
No 306
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=33.39 E-value=2.6e+02 Score=25.30 Aligned_cols=65 Identities=11% Similarity=0.066 Sum_probs=40.3
Q ss_pred hCCCcEEEEcCCc---hHHHHHHHHHHh-CCCCCCceEecCCCC-CcHHHHHHHHhhCCCCCCcEEEEcCChh
Q 024003 156 LASSRIYIVTSNQ---SRFVETLLRELA-GVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLA 223 (274)
Q Consensus 156 ~~g~~laIvTnK~---~~~~~~iL~~~~-gl~~~f~~v~g~~~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~~ 223 (274)
+.++.+-++|+-. .+.+.......+ .++.-|-.+++-... |-|..-+++++..|++ |+.|||.+.
T Consensus 29 RedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~~iP---~IvI~D~p~ 98 (277)
T PRK00994 29 REDIDVRVVGSGAKMGPEEVEEVVKKMLEEWKPDFVIVISPNPAAPGPKKAREILKAAGIP---CIVIGDAPG 98 (277)
T ss_pred ccCceEEEeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCchHHHHHHHhcCCC---EEEEcCCCc
Confidence 4588888888632 122222222101 244445556665433 8888888888888874 899999875
No 307
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi-5-epi-valiolone synthases catalyze the cyclization of sedoheptulose 7-phosphate to 2-epi-5-epi-valiolone in the biosynthesis of C(7)N-aminocyclitol-containing products. The cyclization product, 2-epi-5-epi-valiolone ((2S,3S,4S,5R)-5-(hydroxymethyl)cyclohexanon-2,3,4,5-tetrol), is a precursor of the valienamine moiety. The valienamine unit is responsible for their biological activities as various glycosidic hydrolases inhibitors. Two important microbial secondary metabolites, i.e., validamycin and acarbose, are used in agricultural and biomedical applications. Validamycine A is an antifungal antibiotic which has a strong trehalase inhibitory activity and has been used to control sheath blight disease in rice caused by Rhizoctonia solani. Acarbose is an alpha-glucosidase inhibitor used for the treatment of type II insulin-independent diabetes. Salbostatin produced by Streptomyces albus also belongs to this family. It exhibits s
Probab=33.28 E-value=2.7e+02 Score=26.18 Aligned_cols=97 Identities=7% Similarity=0.057 Sum_probs=52.3
Q ss_pred CCccHHHHHH-h---CCCcEEEEcCCchH--H---HHHHHHHHhCCCCCCceEe-cCCCCCcHHHHHHHHhh---CCCCC
Q 024003 146 LYPGVSDALK-L---ASSRIYIVTSNQSR--F---VETLLRELAGVTITPDRLY-GLGTGPKVNVLKQLQKK---PEHQG 212 (274)
Q Consensus 146 lypGv~e~L~-~---~g~~laIvTnK~~~--~---~~~iL~~~~gl~~~f~~v~-g~~~~pkp~~l~~~l~~---l~~~~ 212 (274)
+|....+.+. . ..-+..|+|.+.-. . +...|+. .|+. +...++ +.+..|.-+.+.++++. .+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~lvVtd~~v~~~~~~~v~~~l~~-~g~~-~~~~v~~~~e~~~s~~~v~~~~~~l~~~~~~r 87 (354)
T cd08199 10 LLDPSNPLLLDVYLEGSGRRFVVVDQNVDKLYGKKLREYFAH-HNIP-LTILVLRAGEAAKTMDTVLKIVDALDAFGISR 87 (354)
T ss_pred ccccchHHHHHhhccCCCeEEEEECccHHHHHHHHHHHHHHh-cCCc-eEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCC
Confidence 3444445555 2 34678888876432 2 2333442 3443 212233 34444666776666644 45544
Q ss_pred C-c-EEEEcC-ChhHHHHhhccCccCCCcEEEEeC
Q 024003 213 L-R-LHFVED-RLATLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 213 ~-~-~l~VGD-s~~Di~aA~~~~~~Agv~~i~v~w 244 (274)
+ + ++-||. +..|+-.+.+.-...|+|+|.|..
T Consensus 88 ~~d~IVaiGGG~v~D~ak~~A~~~~rg~p~i~VPT 122 (354)
T cd08199 88 RREPVLAIGGGVLTDVAGLAASLYRRGTPYVRIPT 122 (354)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 4 4 444887 788887665421235888777766
No 308
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=33.07 E-value=85 Score=26.19 Aligned_cols=51 Identities=16% Similarity=0.317 Sum_probs=26.2
Q ss_pred HHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCc--cCCCcEEEEeCCCCC
Q 024003 198 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPE--LDGWNLYLVDWGYNT 248 (274)
Q Consensus 198 p~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~--~Agv~~i~v~wGy~~ 248 (274)
++.+..+++...-....+.++|.+.-.++.+.+.=. --|+.++|+.-||.+
T Consensus 34 ~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~ 86 (172)
T PF03808_consen 34 SDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFD 86 (172)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 445555555544444556666666665554433100 125566666666544
No 309
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=33.06 E-value=3.6e+02 Score=24.55 Aligned_cols=91 Identities=15% Similarity=0.109 Sum_probs=58.5
Q ss_pred cccCCCCCCCccHHHHHH------h--CCCcEEEEcCCchHHHHHH---HHHHhCCCCCCceEecCCCCCcHHHHHHHHh
Q 024003 138 TTWIGANRLYPGVSDALK------L--ASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGLGTGPKVNVLKQLQK 206 (274)
Q Consensus 138 ~~~~~~~~lypGv~e~L~------~--~g~~laIvTnK~~~~~~~i---L~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~ 206 (274)
+..+.....||=|..+|. + .-+.+.|+|..+...-.++ ++ |+||..-=.+..|++ .|-.. ++
T Consensus 8 ~~~L~~G~aFp~vk~Ll~lN~~~~~e~~~VEVVllSRNspdTGlRv~nSI~-hygL~ItR~~ft~G~---~~~~Y---l~ 80 (264)
T PF06189_consen 8 NEPLKPGVAFPFVKALLALNDLLPEEDPLVEVVLLSRNSPDTGLRVFNSIR-HYGLDITRAAFTGGE---SPYPY---LK 80 (264)
T ss_pred CCCCCCCCchHHHHHHHHhhccccccCCceEEEEEecCCHHHHHHHHHhHH-HhCCcceeeeecCCC---CHHHH---HH
Confidence 344556678888999998 1 3466788886666655554 45 478763212222332 23222 44
Q ss_pred hCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEe
Q 024003 207 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 207 ~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
.++++ +|.-=...|++.|.+ +|++...|.
T Consensus 81 af~v~----LFLSan~~DV~~Ai~----~G~~Aa~v~ 109 (264)
T PF06189_consen 81 AFNVD----LFLSANEDDVQEAID----AGIPAATVL 109 (264)
T ss_pred HhCCc----eEeeCCHHHHHHHHH----cCCCcEEee
Confidence 56676 888888899999998 788877663
No 310
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=32.92 E-value=46 Score=23.69 Aligned_cols=23 Identities=9% Similarity=-0.071 Sum_probs=16.1
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCh
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRL 222 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~ 222 (274)
.+.++|++.|+.+.++|.|||-.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T PF09269_consen 44 GVEKALRKAGAKEGDTVRIGDYE 66 (69)
T ss_dssp THHHHHHTTT--TT-EEEETTEE
T ss_pred CHHHHHHHcCCCCCCEEEEcCEE
Confidence 45667888899999999999854
No 311
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=32.26 E-value=80 Score=26.81 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=30.2
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCC
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wG 245 (274)
..|+-+...+.+.. ++||.+.+-...|-. .|+|+|++.|.
T Consensus 246 ~~~~~~~~~~~~~~------~~Is~RlH~~I~a~~----~g~P~i~i~y~ 285 (286)
T PF04230_consen 246 LSPDELLELISQAD------LVISMRLHGAILALS----LGVPVIAISYD 285 (286)
T ss_pred CCHHHHHHHHhcCC------EEEecCCHHHHHHHH----cCCCEEEEecC
Confidence 34444444444332 999999999999997 89999999884
No 312
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=32.19 E-value=4.6e+02 Score=25.42 Aligned_cols=91 Identities=8% Similarity=-0.012 Sum_probs=55.6
Q ss_pred hCCCcEEEEcC--------C-chHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHH
Q 024003 156 LASSRIYIVTS--------N-QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK 226 (274)
Q Consensus 156 ~~g~~laIvTn--------K-~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~ 226 (274)
++|+++..++- + ....++.+.+. +.-.... .++..+ .++.-+..++.++. ++||=+.+-..
T Consensus 271 ~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~-~~~~~~~-~vi~~~--~~~~e~~~iIs~~d------l~ig~RlHa~I 340 (426)
T PRK10017 271 DEGYQVIALSTCTGIDSYNKDDRMVALNLRQH-VSDPARY-HVVMDE--LNDLEMGKILGACE------LTVGTRLHSAI 340 (426)
T ss_pred HCCCeEEEEecccCccCCCCchHHHHHHHHHh-cccccce-eEecCC--CChHHHHHHHhhCC------EEEEecchHHH
Confidence 67988887773 2 33445667664 5321111 233322 12333444554443 89999999999
Q ss_pred HhhccCccCCCcEEEEeCCCCChHHHHhcCCCCCc
Q 024003 227 NVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRI 261 (274)
Q Consensus 227 aA~~~~~~Agv~~i~v~wGy~~~~~l~~a~~~P~~ 261 (274)
.|-. +|+|++++.|..-...-+...+. |+.
T Consensus 341 ~a~~----~gvP~i~i~Y~~K~~~~~~~lg~-~~~ 370 (426)
T PRK10017 341 ISMN----FGTPAIAINYEHKSAGIMQQLGL-PEM 370 (426)
T ss_pred HHHH----cCCCEEEeeehHHHHHHHHHcCC-ccE
Confidence 9987 89999999997555555566654 444
No 313
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=31.22 E-value=5.2e+02 Score=25.78 Aligned_cols=39 Identities=8% Similarity=-0.058 Sum_probs=27.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEe
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 243 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~ 243 (274)
.+..-+..++.+.+.+ ++||.|.- -..|+. .|+|.+-+.
T Consensus 424 ~Dl~~l~~~l~~~~~D----lliG~s~~-k~~a~~----~giPlir~g 462 (515)
T TIGR01286 424 KDLWHLRSLVFTEPVD----FLIGNSYG-KYIQRD----TLVPLIRIG 462 (515)
T ss_pred CCHHHHHHHHhhcCCC----EEEECchH-HHHHHH----cCCCEEEec
Confidence 3566677777666655 99999965 455565 799987553
No 314
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=30.59 E-value=2.6e+02 Score=27.06 Aligned_cols=90 Identities=17% Similarity=0.120 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHHHHHhhhhc-cc--CCCCCCCccHHHHHH---hCCCcEEEE-cCC----chHHHHHHHHHHhCCCCC
Q 024003 117 NREALIELSGKVRDEWMDTDFT-TW--IGANRLYPGVSDALK---LASSRIYIV-TSN----QSRFVETLLRELAGVTIT 185 (274)
Q Consensus 117 ~~~~~~~~~~~~r~~~~~~y~~-~~--~~~~~lypGv~e~L~---~~g~~laIv-TnK----~~~~~~~iL~~~~gl~~~ 185 (274)
+.+++.+.+.+....|...... .. ....-.||.+.++|+ +.|++++|. ||- ..+.++++++ +|++..
T Consensus 55 t~~evl~ev~~d~~~~~~~~ggVtisGGGepl~~~~l~eLl~~lk~~gi~taI~~TnG~~l~~~e~~~~L~~--~gld~v 132 (404)
T TIGR03278 55 PPQVVLGEVQTSLGFRTGRDTKVTISGGGDVSCYPELEELTKGLSDLGLPIHLGYTSGKGFDDPEIAEFLID--NGVREV 132 (404)
T ss_pred CHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCHHHHHHHHHHHhCCCCEEEeCCCCcccCCHHHHHHHHH--cCCCEE
Confidence 4455555555555554321100 01 112357899999999 679999996 883 4566777776 577643
Q ss_pred CceEecCCC-------C-CcHHHHHHHHhhC
Q 024003 186 PDRLYGLGT-------G-PKVNVLKQLQKKP 208 (274)
Q Consensus 186 f~~v~g~~~-------~-pkp~~l~~~l~~l 208 (274)
.-.|-+.+. + |.++.+.+.++.+
T Consensus 133 ~iSvka~dpe~h~kl~G~~~a~~ILe~L~~L 163 (404)
T TIGR03278 133 SFTVFATDPELRREWMKDPTPEASLQCLRRF 163 (404)
T ss_pred EEecccCCHHHHHHHhCCCCHHHHHHHHHHH
Confidence 222334331 2 6655554444443
No 315
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.41 E-value=46 Score=23.69 Aligned_cols=25 Identities=24% Similarity=0.228 Sum_probs=20.0
Q ss_pred HHHHHhhCCCCCCcEEEEcCChhHHHHhh
Q 024003 201 LKQLQKKPEHQGLRLHFVEDRLATLKNVI 229 (274)
Q Consensus 201 l~~~l~~l~~~~~~~l~VGDs~~Di~aA~ 229 (274)
+.+.+++.|+- +|.||+..||+.-+
T Consensus 7 VqQlLK~~G~i----vyfg~r~~~iemm~ 31 (68)
T COG4483 7 VQQLLKKFGII----VYFGKRLYDIEMMQ 31 (68)
T ss_pred HHHHHHHCCee----eecCCHHHHHHHHH
Confidence 45677888874 99999999998765
No 316
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=30.27 E-value=29 Score=25.63 Aligned_cols=15 Identities=33% Similarity=0.357 Sum_probs=12.8
Q ss_pred eEEEecCcccccCHH
Q 024003 4 LYALDFDGVICDSCE 18 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~ 18 (274)
.|+++=|||.||+=.
T Consensus 42 ~lvL~eDGTeVddEe 56 (78)
T cd01615 42 TLVLEEDGTEVDDEE 56 (78)
T ss_pred EEEEeCCCcEEccHH
Confidence 488999999999855
No 317
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=29.51 E-value=27 Score=30.41 Aligned_cols=13 Identities=23% Similarity=0.358 Sum_probs=11.4
Q ss_pred ceEEEecCccccc
Q 024003 3 DLYALDFDGVICD 15 (274)
Q Consensus 3 ~~ilFDlDGTLvD 15 (274)
+.|-||||||+.-
T Consensus 59 ~~v~~D~~GT~m~ 71 (271)
T PF06901_consen 59 HTVTFDFQGTKMV 71 (271)
T ss_pred eeEEEeccceEEE
Confidence 6799999999983
No 318
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=29.43 E-value=37 Score=29.86 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=19.4
Q ss_pred eEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
+++||-||||.-+-..+..-+...++++
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~l 40 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQKL 40 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHHH
Confidence 7999999999876555554455555544
No 319
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=29.21 E-value=1.1e+02 Score=29.20 Aligned_cols=70 Identities=21% Similarity=0.125 Sum_probs=47.6
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHHhCCCCCCc-eEecCCCC-CcHHHHHHHHhhCCCCCCcEEEEc
Q 024003 148 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD-RLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 219 (274)
Q Consensus 148 pGv~e~L~--~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~-~v~g~~~~-pkp~~l~~~l~~l~~~~~~~l~VG 219 (274)
|||.-.|. .+.+.+.|.|+-..-++..+++. +.-..|.. .++++.++ -++..+. =+..++-++..+|+|.
T Consensus 217 PgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~-lDP~g~IsYkLfr~~t~y~~G~HvK-dls~LNRdl~kVivVd 290 (393)
T KOG2832|consen 217 PGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDA-LDPKGYISYKLFRGATKYEEGHHVK-DLSKLNRDLQKVIVVD 290 (393)
T ss_pred chHHHHHHhhcccceEEEEecCCccchhhhHhh-cCCcceEEEEEecCcccccCccchh-hhhhhccccceeEEEE
Confidence 88888888 67889999999999999999996 55544332 34454433 1111222 2456777888888885
No 320
>COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion]
Probab=28.82 E-value=3.5e+02 Score=24.06 Aligned_cols=61 Identities=11% Similarity=0.080 Sum_probs=38.7
Q ss_pred hCCCcEEEEcCCc-------hHHHHHHHHHHhCCCCCCceEecCCCC-CcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024003 156 LASSRIYIVTSNQ-------SRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRL 222 (274)
Q Consensus 156 ~~g~~laIvTnK~-------~~~~~~iL~~~~gl~~~f~~v~g~~~~-pkp~~l~~~l~~l~~~~~~~l~VGDs~ 222 (274)
+.++.+-|+++-. +..+..+++. +.- -|-..+|.... |-|.--++++...+++ ++.|||.+
T Consensus 29 Redi~vrVvgsgaKM~Pe~veaav~~~~e~-~~p--Dfvi~isPNpaaPGP~kARE~l~~s~~P---aiiigDaP 97 (277)
T COG1927 29 REDIEVRVVGSGAKMDPECVEAAVTEMLEE-FNP--DFVIYISPNPAAPGPKKAREILSDSDVP---AIIIGDAP 97 (277)
T ss_pred cCCceEEEeccccccChHHHHHHHHHHHHh-cCC--CEEEEeCCCCCCCCchHHHHHHhhcCCC---EEEecCCc
Confidence 5788888887632 2344555664 432 23333343333 7777778888877765 79999987
No 321
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=28.80 E-value=1.2e+02 Score=22.91 Aligned_cols=37 Identities=19% Similarity=0.149 Sum_probs=24.7
Q ss_pred CCcEEEE-cCChhHHHHhhccCccCCCcEEEEeCCCCChHHH
Q 024003 212 GLRLHFV-EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 252 (274)
Q Consensus 212 ~~~~l~V-GDs~~Di~aA~~~~~~Agv~~i~v~wGy~~~~~l 252 (274)
+...+.+ ||+..=+.+|.. +|++++-++.|+...++.
T Consensus 40 ~~~lvIt~gdR~di~~~a~~----~~i~~iIltg~~~~~~~v 77 (105)
T PF07085_consen 40 PGDLVITPGDREDIQLAAIE----AGIACIILTGGLEPSEEV 77 (105)
T ss_dssp TTEEEEEETT-HHHHHHHCC----TTECEEEEETT----HHH
T ss_pred CCeEEEEeCCcHHHHHHHHH----hCCCEEEEeCCCCCCHHH
Confidence 3677777 999666666665 899999999998766554
No 322
>PLN02887 hydrolase family protein
Probab=28.65 E-value=1.3e+02 Score=30.51 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=32.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHHhCCC
Q 024003 145 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 183 (274)
Q Consensus 145 ~lypGv~e~L~---~~g~~laIvTnK~~~~~~~iL~~~~gl~ 183 (274)
++-|...+.|+ ++|++++|+|+.+...+..+++. +++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKM-VDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCcc
Confidence 45677778887 79999999999999999999996 8875
No 323
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.60 E-value=3.2e+02 Score=26.90 Aligned_cols=88 Identities=16% Similarity=0.140 Sum_probs=61.0
Q ss_pred ccCCCCCCC-ccHHHHHH----hCCCcEEEE-cC-CchHHHHHHHHHHhCCCCCCceEecCCCC---CcHHHHHHHHhhC
Q 024003 139 TWIGANRLY-PGVSDALK----LASSRIYIV-TS-NQSRFVETLLRELAGVTITPDRLYGLGTG---PKVNVLKQLQKKP 208 (274)
Q Consensus 139 ~~~~~~~ly-pGv~e~L~----~~g~~laIv-Tn-K~~~~~~~iL~~~~gl~~~f~~v~g~~~~---pkp~~l~~~l~~l 208 (274)
-....+-.| |++.+-|+ +-|++.+=- ++ +|-+.++.-|++ +... .+|.|+-...+ -+.+.+.++.+--
T Consensus 131 vllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~al~~-ak~~-~~DvvIvDTAGRl~ide~Lm~El~~Ik 208 (451)
T COG0541 131 VLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALEK-AKEE-GYDVVIVDTAGRLHIDEELMDELKEIK 208 (451)
T ss_pred eEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHHHHH-HHHc-CCCEEEEeCCCcccccHHHHHHHHHHH
Confidence 334445556 99999998 677776654 44 477899999996 7554 46887754433 5667777766544
Q ss_pred -CCCCCcEEEEcCChhHHHHh
Q 024003 209 -EHQGLRLHFVEDRLATLKNV 228 (274)
Q Consensus 209 -~~~~~~~l~VGDs~~Di~aA 228 (274)
-+.|.|++||=|+..--.++
T Consensus 209 ~~~~P~E~llVvDam~GQdA~ 229 (451)
T COG0541 209 EVINPDETLLVVDAMIGQDAV 229 (451)
T ss_pred hhcCCCeEEEEEecccchHHH
Confidence 46799999999987665443
No 324
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=28.08 E-value=33 Score=25.05 Aligned_cols=15 Identities=40% Similarity=0.505 Sum_probs=12.7
Q ss_pred eEEEecCcccccCHH
Q 024003 4 LYALDFDGVICDSCE 18 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~ 18 (274)
.|+++=|||.||+=.
T Consensus 40 ~l~L~eDGT~VddEe 54 (74)
T smart00266 40 TLVLEEDGTIVDDEE 54 (74)
T ss_pred EEEEecCCcEEccHH
Confidence 578899999999855
No 325
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=28.03 E-value=66 Score=27.98 Aligned_cols=49 Identities=16% Similarity=0.004 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhCCC---CCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024003 170 RFVETLLRELAGVT---ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 222 (274)
Q Consensus 170 ~~~~~iL~~~~gl~---~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 222 (274)
..++.+|++ .+.. ..|-.++|.|. .+-+++.. ++.+. ...-.+.||...
T Consensus 168 ~av~~ll~~-~~~~~~~~~~~l~~GDD~-tDE~~f~~-~~~~~-~~~~~i~V~~~~ 219 (235)
T PF02358_consen 168 SAVRRLLEE-LPFAGPKPDFVLYIGDDR-TDEDAFRA-LRELE-EGGFGIKVGSVS 219 (235)
T ss_dssp HHHHHHHTT-S---------EEEEESSH-HHHHHHHT-TTTS-----EEEEES---
T ss_pred HHHHHHHHh-cCccccccceeEEecCCC-CCHHHHHH-HHhcc-cCCCCeEEEeec
Confidence 467778875 6553 33555667552 35555543 33331 223347787764
No 326
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=27.91 E-value=68 Score=22.82 Aligned_cols=24 Identities=8% Similarity=-0.115 Sum_probs=19.5
Q ss_pred HHHHHHhhCCCCCCcEEEEcCChh
Q 024003 200 VLKQLQKKPEHQGLRLHFVEDRLA 223 (274)
Q Consensus 200 ~l~~~l~~l~~~~~~~l~VGDs~~ 223 (274)
.+..+|++.|+.+.++|.|||-..
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~eF 67 (69)
T TIGR03595 44 GVEDALRKAGAKDGDTVRIGDFEF 67 (69)
T ss_pred CHHHHHHHcCCCCCCEEEEccEEE
Confidence 367788889999999999998543
No 327
>cd00452 KDPG_aldolase KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.
Probab=27.63 E-value=3.6e+02 Score=22.64 Aligned_cols=18 Identities=6% Similarity=0.128 Sum_probs=11.8
Q ss_pred ChhHHHHhhccCccCCCcEEEE
Q 024003 221 RLATLKNVIKEPELDGWNLYLV 242 (274)
Q Consensus 221 s~~Di~aA~~~~~~Agv~~i~v 242 (274)
+..++..|.+ +|...+++
T Consensus 106 t~~e~~~A~~----~Gad~i~~ 123 (190)
T cd00452 106 TPTEIMQALE----LGADIVKL 123 (190)
T ss_pred CHHHHHHHHH----CCCCEEEE
Confidence 5566666655 67777776
No 328
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=27.11 E-value=35 Score=25.20 Aligned_cols=15 Identities=33% Similarity=0.337 Sum_probs=12.2
Q ss_pred eEEEecCcccccCHH
Q 024003 4 LYALDFDGVICDSCE 18 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~ 18 (274)
.++++=|||.||+=.
T Consensus 42 ~lvL~eDGT~VddEe 56 (78)
T PF02017_consen 42 RLVLEEDGTEVDDEE 56 (78)
T ss_dssp EEEETTTTCBESSCH
T ss_pred EEEEeCCCcEEccHH
Confidence 467889999999754
No 329
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=27.08 E-value=2e+02 Score=25.73 Aligned_cols=60 Identities=10% Similarity=0.140 Sum_probs=32.7
Q ss_pred CCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhh
Q 024003 146 LYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKK 207 (274)
Q Consensus 146 lypGv~e~L~~~g~~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~ 207 (274)
+.-||.+.++++|+.+.++++....-.+..++. + +....|.++=.....+.+-+....+.
T Consensus 19 ii~gIe~~a~~~Gy~l~l~~t~~~~~~e~~i~~-l-~~~~vDGiI~~s~~~~~~~l~~~~~~ 78 (279)
T PF00532_consen 19 IIRGIEQEAREHGYQLLLCNTGDDEEKEEYIEL-L-LQRRVDGIILASSENDDEELRRLIKS 78 (279)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTTHHHHHHHHH-H-HHTTSSEEEEESSSCTCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCEEEEecCCCchHHHHHHHH-H-HhcCCCEEEEecccCChHHHHHHHHc
Confidence 345666666689999988776555544465553 3 33345555422323343444444444
No 330
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=26.96 E-value=36 Score=25.31 Aligned_cols=15 Identities=33% Similarity=0.417 Sum_probs=12.9
Q ss_pred eEEEecCcccccCHH
Q 024003 4 LYALDFDGVICDSCE 18 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~ 18 (274)
.|+.+=|||.|||-.
T Consensus 41 ~lvLeeDGT~Vd~Ee 55 (81)
T cd06537 41 TLVLEEDGTAVDSED 55 (81)
T ss_pred EEEEecCCCEEccHH
Confidence 578899999999865
No 331
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=26.87 E-value=36 Score=25.27 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=12.7
Q ss_pred eEEEecCcccccCHH
Q 024003 4 LYALDFDGVICDSCE 18 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~ 18 (274)
.|+++=|||.|||=.
T Consensus 44 ~lvL~eDGT~VddEe 58 (80)
T cd06536 44 TLVLAEDGTIVEDED 58 (80)
T ss_pred EEEEecCCcEEccHH
Confidence 478999999999855
No 332
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=26.79 E-value=2.7e+02 Score=25.77 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=55.8
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
.+.=+|...++.++.+.++ .. .-.|+|+..-+...-|.+++++.+. ++.+|. +..|+.... ..|...
T Consensus 192 TIC~aT~~RQ~a~~~La~~-vD----~miVVGg~~SsNT~kL~~i~~~~~~---~t~~Ie-~~~el~~~~----l~~~~~ 258 (298)
T PRK01045 192 DICYATQNRQEAVKELAPQ-AD----LVIVVGSKNSSNSNRLREVAEEAGA---PAYLID-DASEIDPEW----FKGVKT 258 (298)
T ss_pred CcchhhHHHHHHHHHHHhh-CC----EEEEECCCCCccHHHHHHHHHHHCC---CEEEEC-ChHHCcHHH----hcCCCE
Confidence 4556777788888777664 22 2356676544778888889988773 357775 456776443 267889
Q ss_pred EEEeCCCCChHHH
Q 024003 240 YLVDWGYNTPKER 252 (274)
Q Consensus 240 i~v~wGy~~~~~l 252 (274)
|||+=|-.+++.+
T Consensus 259 VGitaGASTP~~l 271 (298)
T PRK01045 259 VGVTAGASAPEWL 271 (298)
T ss_pred EEEEecCCCCHHH
Confidence 9999999998866
No 333
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer. This family is bacteria specific.
Probab=26.59 E-value=3.6e+02 Score=24.95 Aligned_cols=89 Identities=18% Similarity=0.124 Sum_probs=49.5
Q ss_pred HHHHhCC-CcEEEEcCCchH-----HHHHHHHHHhCCCCC-CceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcC-Chh
Q 024003 152 DALKLAS-SRIYIVTSNQSR-----FVETLLRELAGVTIT-PDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVED-RLA 223 (274)
Q Consensus 152 e~L~~~g-~~laIvTnK~~~-----~~~~iL~~~~gl~~~-f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGD-s~~ 223 (274)
+.+.+.| -+..|+|.+... .+...|++ .|++.. |+. +..+..|..+.+..+.+.+.-..+-+|-||= |..
T Consensus 16 ~~~~~~~~~~~livtd~~~~~~~~~~v~~~l~~-~~i~~~~~~~-~~~~~~pt~~~v~~~~~~~~~~~d~IIaIGGGs~~ 93 (348)
T cd08175 16 EILKEFGYKKALIVADENTYAAAGKKVEALLKR-AGVVVLLIVL-PAGDLIADEKAVGRVLKELERDTDLIIAVGSGTIN 93 (348)
T ss_pred HHHHhcCCCcEEEEECCcHHHHHHHHHHHHHHH-CCCeeEEeec-CCCcccCCHHHHHHHHHHhhccCCEEEEECCcHHH
Confidence 3333344 468888876432 23344553 565321 111 1122237778888777766435555666765 667
Q ss_pred HHHHhhccCccCCCcEEEEeC
Q 024003 224 TLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 224 Di~aA~~~~~~Agv~~i~v~w 244 (274)
|+-.+-+ ...|+|.|.|..
T Consensus 94 D~aK~vA--~~~~~p~i~IPT 112 (348)
T cd08175 94 DITKYVS--YKTGIPYISVPT 112 (348)
T ss_pred HHHHHHH--HhcCCCEEEecC
Confidence 7655543 236788888864
No 334
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=26.27 E-value=4.9e+02 Score=23.52 Aligned_cols=94 Identities=16% Similarity=0.175 Sum_probs=67.9
Q ss_pred CCCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHHhCCCC--CCceEecCCCC-CcHHHHHHHHhhCCCC
Q 024003 141 IGANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLYGLGTG-PKVNVLKQLQKKPEHQ 211 (274)
Q Consensus 141 ~~~~~lypGv~e~L~------~~g~~laIvTnK~~~~~~~iL~~~~gl~~--~f~~v~g~~~~-pkp~~l~~~l~~l~~~ 211 (274)
.+.-.|+|.+.|+|+ +.|+.+.--||-.--.++++.+ -|-.- ....=+|+..+ -.|..|..++++..++
T Consensus 107 ~d~~tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee--~GcaavMPl~aPIGSg~G~~n~~~l~iiie~a~VP 184 (262)
T COG2022 107 GDEKTLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEE--AGCAAVMPLGAPIGSGLGLQNPYNLEIIIEEADVP 184 (262)
T ss_pred cCCcccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHh--cCceEeccccccccCCcCcCCHHHHHHHHHhCCCC
Confidence 344579999999999 6999999999999999999988 46431 12233444444 7889999999988877
Q ss_pred CCcEEEEcC---ChhHHHHhhccCccCCCcEEEEeC
Q 024003 212 GLRLHFVED---RLATLKNVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 212 ~~~~l~VGD---s~~Di~aA~~~~~~Agv~~i~v~w 244 (274)
+.|.= ++.|...|.+ -|+..|.+..
T Consensus 185 ----viVDAGiG~pSdAa~aME----lG~DaVL~NT 212 (262)
T COG2022 185 ----VIVDAGIGTPSDAAQAME----LGADAVLLNT 212 (262)
T ss_pred ----EEEeCCCCChhHHHHHHh----cccceeehhh
Confidence 66632 4667766666 5666666643
No 335
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=26.15 E-value=2.6e+02 Score=20.23 Aligned_cols=54 Identities=13% Similarity=0.301 Sum_probs=39.3
Q ss_pred EEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCCh
Q 024003 163 IVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 222 (274)
Q Consensus 163 IvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~ 222 (274)
|--+|.-++.-.+++. ||+ ..|-|+.++--...+.++++.+. +...+.+.=|.+
T Consensus 16 vS~s~DGe~ia~~~~~-~G~----~~iRGSs~rgg~~Alr~~~~~lk-~G~~~~itpDGP 69 (74)
T PF04028_consen 16 VSRSRDGELIARVLER-FGF----RTIRGSSSRGGARALREMLRALK-EGYSIAITPDGP 69 (74)
T ss_pred EccCcCHHHHHHHHHH-cCC----CeEEeCCCCcHHHHHHHHHHHHH-CCCeEEEeCCCC
Confidence 3337888999999995 986 57889877766777777777776 445566666654
No 336
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=25.81 E-value=39 Score=24.93 Aligned_cols=15 Identities=33% Similarity=0.507 Sum_probs=12.8
Q ss_pred eEEEecCcccccCHH
Q 024003 4 LYALDFDGVICDSCE 18 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~ 18 (274)
.++.+=|||.|||=.
T Consensus 42 ~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 42 TLVLEEDGTVVDTEE 56 (78)
T ss_pred EEEEeCCCCEEccHH
Confidence 578899999999865
No 337
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=25.66 E-value=83 Score=26.26 Aligned_cols=75 Identities=19% Similarity=0.124 Sum_probs=42.7
Q ss_pred hCCCcEEEEcCCchHH-HHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhh---CCCCCCcEEEEcCChhHHHHhhcc
Q 024003 156 LASSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKK---PEHQGLRLHFVEDRLATLKNVIKE 231 (274)
Q Consensus 156 ~~g~~laIvTnK~~~~-~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~---l~~~~~~~l~VGDs~~Di~aA~~~ 231 (274)
..+-++++++....-. +..+-+ .+|++-. -..+ .+++-+..++++ -|++ ++||++.. ...|++
T Consensus 75 ~~~~~Iavv~~~~~~~~~~~~~~-ll~~~i~-~~~~-----~~~~e~~~~i~~~~~~G~~----viVGg~~~-~~~A~~- 141 (176)
T PF06506_consen 75 KYGPKIAVVGYPNIIPGLESIEE-LLGVDIK-IYPY-----DSEEEIEAAIKQAKAEGVD----VIVGGGVV-CRLARK- 141 (176)
T ss_dssp CCTSEEEEEEESS-SCCHHHHHH-HHT-EEE-EEEE-----SSHHHHHHHHHHHHHTT------EEEESHHH-HHHHHH-
T ss_pred hcCCcEEEEecccccHHHHHHHH-HhCCceE-EEEE-----CCHHHHHHHHHHHHHcCCc----EEECCHHH-HHHHHH-
Confidence 4667899999766554 445555 4666421 1122 123334444443 4766 99999975 677776
Q ss_pred CccCCCcEEEEeCCC
Q 024003 232 PELDGWNLYLVDWGY 246 (274)
Q Consensus 232 ~~~Agv~~i~v~wGy 246 (274)
.|++++.+.-|+
T Consensus 142 ---~gl~~v~i~sg~ 153 (176)
T PF06506_consen 142 ---LGLPGVLIESGE 153 (176)
T ss_dssp ---TTSEEEESS--H
T ss_pred ---cCCcEEEEEecH
Confidence 899999886654
No 338
>TIGR01357 aroB 3-dehydroquinate synthase. This model represents 3-dehydroquinate synthase, the enzyme catalyzing the second of seven steps in the shikimate pathway of chorismate biosynthesis. Chorismate is the last common intermediate in the biosynthesis of all three aromatic amino acids.
Probab=25.44 E-value=3.1e+02 Score=25.37 Aligned_cols=85 Identities=11% Similarity=0.156 Sum_probs=45.6
Q ss_pred CCcEEEEcCCchH--HHH---HHHHHHhCCCCCCceEec-CCCCCcHHHHHHHHhhC---CCC-CCcEEEEcC-ChhHHH
Q 024003 158 SSRIYIVTSNQSR--FVE---TLLRELAGVTITPDRLYG-LGTGPKVNVLKQLQKKP---EHQ-GLRLHFVED-RLATLK 226 (274)
Q Consensus 158 g~~laIvTnK~~~--~~~---~iL~~~~gl~~~f~~v~g-~~~~pkp~~l~~~l~~l---~~~-~~~~l~VGD-s~~Di~ 226 (274)
+-+..|+|++.-. +.+ ..|++ .|+.. ...++. .+..|.-+.+.++++.+ +.+ ++-+|-||- |..|+-
T Consensus 20 ~~~~livtd~~~~~~~~~~v~~~L~~-~g~~~-~~~~~~~~e~~~~~~~v~~~~~~~~~~~~~r~d~IIavGGGsv~D~a 97 (344)
T TIGR01357 20 PSKLVIITDETVADLYADKLLEALQA-LGYNV-LKLTVPDGEESKSLETVQRLYDQLLEAGLDRSSTIIALGGGVVGDLA 97 (344)
T ss_pred CCeEEEEECCchHHHHHHHHHHHHHh-cCCce-eEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEEcChHHHHHH
Confidence 5678888876442 222 33443 45532 112343 34446666666665544 443 345666776 667776
Q ss_pred HhhccCccCCCcEEEEeC
Q 024003 227 NVIKEPELDGWNLYLVDW 244 (274)
Q Consensus 227 aA~~~~~~Agv~~i~v~w 244 (274)
.+.+.....|+|.|.|..
T Consensus 98 K~iA~~~~~~~p~i~VPT 115 (344)
T TIGR01357 98 GFVAATYMRGIRFIQVPT 115 (344)
T ss_pred HHHHHHHccCCCEEEecC
Confidence 554311224788888765
No 339
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=25.36 E-value=2.4e+02 Score=25.84 Aligned_cols=81 Identities=19% Similarity=0.164 Sum_probs=56.9
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
.+.=+|...++.++.+.++ ..+ -.|+|+..-++..-|.+++++.+. ++.+|. +..|+.... ..|...
T Consensus 190 TIC~AT~~RQ~a~~~la~~-vD~----miVVGg~nSsNT~rL~ei~~~~~~---~t~~Ie-~~~el~~~~----l~~~~~ 256 (280)
T TIGR00216 190 TICYATQNRQDAVKELAPE-VDL----MIVIGGKNSSNTTRLYEIAEEHGP---PSYLIE-TAEELPEEW----LKGVKV 256 (280)
T ss_pred CcccccHHHHHHHHHHHhh-CCE----EEEECCCCCchHHHHHHHHHHhCC---CEEEEC-ChHHCCHHH----hCCCCE
Confidence 4566788888888888774 322 356676544778888999988873 367774 556776543 257788
Q ss_pred EEEeCCCCChHHHH
Q 024003 240 YLVDWGYNTPKERA 253 (274)
Q Consensus 240 i~v~wGy~~~~~l~ 253 (274)
||++=|-.+++.+-
T Consensus 257 VGiTAGASTP~~li 270 (280)
T TIGR00216 257 VGITAGASTPDWII 270 (280)
T ss_pred EEEEecCCCCHHHH
Confidence 99999998887653
No 340
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=25.00 E-value=1.5e+02 Score=27.74 Aligned_cols=84 Identities=15% Similarity=0.150 Sum_probs=49.5
Q ss_pred EEEEcCCc--hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhC-----CCCCCcEEEEcCChhHHHHhhccCc
Q 024003 161 IYIVTSNQ--SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP-----EHQGLRLHFVEDRLATLKNVIKEPE 233 (274)
Q Consensus 161 laIvTnK~--~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l-----~~~~~~~l~VGDs~~Di~aA~~~~~ 233 (274)
..|+|+.. ..+...+.+. |++ ...+.....++......+-.++..+ ...|+=++..||+..-+-+|..+ .
T Consensus 12 ~li~tG~H~~~~~g~~~~~~-f~i-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA-~ 88 (346)
T PF02350_consen 12 ILIVTGQHLDPEMGDTFFEG-FGI-PKPDYLLDSDSQSMAKSTGLAIIELADVLEREKPDAVLVLGDRNEALAAALAA-F 88 (346)
T ss_dssp EEEEECSS--CHHHHHHHHH-TT---SEEEE--STTS-HHHHHHHHHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHH-H
T ss_pred EEEEeCCCCCHHHHHHHHhh-CCC-CCCCcccccccchHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHH-H
Confidence 46778887 8888888886 999 5667777655432222222222221 24788999999998877766653 3
Q ss_pred cCCCcEEEEeCCCC
Q 024003 234 LDGWNLYLVDWGYN 247 (274)
Q Consensus 234 ~Agv~~i~v~wGy~ 247 (274)
..++|++=+.=|-+
T Consensus 89 ~~~ipv~HieaGlR 102 (346)
T PF02350_consen 89 YLNIPVAHIEAGLR 102 (346)
T ss_dssp HTT-EEEEES----
T ss_pred HhCCCEEEecCCCC
Confidence 48999999988833
No 341
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=24.73 E-value=2.1e+02 Score=31.21 Aligned_cols=82 Identities=15% Similarity=0.149 Sum_probs=54.4
Q ss_pred hCCCcEEEEcCC-----chHHHHHHHHHHhCCCCCCceEecCC-C-------C-CcHHHHHHHHhhCCCCCCcE-EEEcC
Q 024003 156 LASSRIYIVTSN-----QSRFVETLLRELAGVTITPDRLYGLG-T-------G-PKVNVLKQLQKKPEHQGLRL-HFVED 220 (274)
Q Consensus 156 ~~g~~laIvTnK-----~~~~~~~iL~~~~gl~~~f~~v~g~~-~-------~-pkp~~l~~~l~~l~~~~~~~-l~VGD 220 (274)
+.-+++.-...+ +-..+++.|.. .|+.- ..|++.. . . .|...|.++..++|++.+++ ||+||
T Consensus 905 q~~~k~SY~v~d~~~~~~v~elr~~Lr~-~gLr~--~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGd 981 (1050)
T TIGR02468 905 STDHCYAFKVKDPSKVPPVKELRKLLRI-QGLRC--HAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGE 981 (1050)
T ss_pred CCCceEEEEecCcccCccHHHHHHHHHh-CCCce--EEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEecc
Confidence 344666664222 34677788885 77753 3555543 1 1 68899999999999999998 66999
Q ss_pred Chh-HHHHhhccCccCCCcEEEEeCC
Q 024003 221 RLA-TLKNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 221 s~~-Di~aA~~~~~~Agv~~i~v~wG 245 (274)
|-+ |.+.=. .|+.---|.=|
T Consensus 982 SGntD~e~Ll-----~G~~~tvi~~g 1002 (1050)
T TIGR02468 982 SGDTDYEGLL-----GGLHKTVILKG 1002 (1050)
T ss_pred CCCCCHHHHh-----CCceeEEEEec
Confidence 999 954322 24444444445
No 342
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=23.47 E-value=1.3e+02 Score=27.19 Aligned_cols=52 Identities=12% Similarity=0.100 Sum_probs=44.3
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcEEEEeCCCCC
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 248 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~i~v~wGy~~ 248 (274)
.+..-|.+-|..+|++-.+...|||...+|..+-+.+.. ....|-++-|-|.
T Consensus 21 tNa~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~-r~D~vI~tGGLGP 72 (255)
T COG1058 21 TNAAFLADELTELGVDLARITTVGDNPDRIVEALREASE-RADVVITTGGLGP 72 (255)
T ss_pred chHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHh-CCCEEEECCCcCC
Confidence 778888888999999999999999999999988775543 4889999988864
No 343
>smart00497 IENR1 Intron encoded nuclease repeat motif. Repeat of unknown function, but possibly DNA-binding via helix-turn-helix motif (Ponting, unpublished).
Probab=23.33 E-value=58 Score=21.06 Aligned_cols=25 Identities=28% Similarity=0.414 Sum_probs=16.9
Q ss_pred ceEEEecCcccccCHHHHHHHHHHHHHHh
Q 024003 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~n~a~~~~ 31 (274)
++.++|.||+++...+ ++..|.+.+
T Consensus 3 ~V~~~d~~~~~i~~f~----S~~eAa~~l 27 (53)
T smart00497 3 PVYVYDLDGNLIGEFS----SIREAAKYL 27 (53)
T ss_pred cEEEEeCCCCEEEEec----CHHHHHHHh
Confidence 5789999999987554 344444444
No 344
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.21 E-value=44 Score=33.18 Aligned_cols=13 Identities=23% Similarity=0.468 Sum_probs=11.5
Q ss_pred CceEEEecCcccc
Q 024003 2 EDLYALDFDGVIC 14 (274)
Q Consensus 2 ~~~ilFDlDGTLv 14 (274)
.|++++|||+||.
T Consensus 222 kK~LVLDLDNTLW 234 (574)
T COG3882 222 KKALVLDLDNTLW 234 (574)
T ss_pred cceEEEecCCccc
Confidence 3789999999996
No 345
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=23.10 E-value=41 Score=31.74 Aligned_cols=16 Identities=13% Similarity=0.356 Sum_probs=13.3
Q ss_pred ceEEEecCcccccCHH
Q 024003 3 DLYALDFDGVICDSCE 18 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~ 18 (274)
++|-||+|.||+-=-.
T Consensus 13 ~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 13 QVFGFDMDYTLAQYKS 28 (343)
T ss_pred CEEEECccccccccCh
Confidence 7899999999997433
No 346
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=23.05 E-value=2.3e+02 Score=29.76 Aligned_cols=39 Identities=23% Similarity=0.226 Sum_probs=28.1
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
.|.++...+.++-| ..+..|||+-||+-+-+++ ++|+-.
T Consensus 768 QKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A--~~GiGI 806 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAA--DVGIGI 806 (1051)
T ss_pred HHHHHHHHHHHhhC---ceEEEEcCCCccchheeec--ccceee
Confidence 56677776666555 6789999999999988863 245433
No 347
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=22.89 E-value=4.8e+02 Score=22.57 Aligned_cols=82 Identities=15% Similarity=0.172 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHhCCCCCCceEecCCCCC-cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc--CccCCCcEEEEeC
Q 024003 168 QSRFVETLLRELAGVTITPDRLYGLGTGP-KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE--PELDGWNLYLVDW 244 (274)
Q Consensus 168 ~~~~~~~iL~~~~gl~~~f~~v~g~~~~p-kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~--~~~Agv~~i~v~w 244 (274)
..+.++.+-+. +|+... .+--....+ ..+.+..++.++....-+.+..||-..|.+..+.. ....|++++.=.|
T Consensus 44 ~~~~~~~~A~~-lgip~~--~i~~~~~~~~~~~~l~~~l~~~~~~g~~~vv~G~i~sd~~~~~~e~v~~~~gl~~~~PLw 120 (218)
T TIGR03679 44 NIELTRLQAEA-LGIPLV--KIETSGEKEKEVEDLKGALKELKREGVEGIVTGAIASRYQKSRIERICEELGLKVFAPLW 120 (218)
T ss_pred CHHHHHHHHHH-hCCCEE--EEECCCCChHHHHHHHHHHHHHHHcCCCEEEECCcccHhHHHHHHHHHHhCCCeEEeehh
Confidence 34567777775 888532 121111111 11224334433311134588999987765322210 0138999999999
Q ss_pred CCCChHHH
Q 024003 245 GYNTPKER 252 (274)
Q Consensus 245 Gy~~~~~l 252 (274)
|....+-+
T Consensus 121 ~~~~~el~ 128 (218)
T TIGR03679 121 GRDQEEYL 128 (218)
T ss_pred cCCHHHHH
Confidence 98665433
No 348
>PLN02151 trehalose-phosphatase
Probab=22.73 E-value=1.4e+02 Score=28.40 Aligned_cols=49 Identities=18% Similarity=0.147 Sum_probs=28.0
Q ss_pred cCCchHHHHHHHHHHhCCCCC---CceEecCCCCCcHHHHHHHHhh-CCCCCCcEEEEcC
Q 024003 165 TSNQSRFVETLLRELAGVTIT---PDRLYGLGTGPKVNVLKQLQKK-PEHQGLRLHFVED 220 (274)
Q Consensus 165 TnK~~~~~~~iL~~~~gl~~~---f~~v~g~~~~pkp~~l~~~l~~-l~~~~~~~l~VGD 220 (274)
.||... ++.+|++ +++... |-..+| |...+.+.+..+-+. -|+. +-||.
T Consensus 268 ~dKG~A-v~~Ll~~-~~~~~~~~~~pvyiG-DD~TDEDaF~~L~~~~~G~g----I~Vg~ 320 (354)
T PLN02151 268 WDKGKA-LEFLLES-LGYANCTDVFPIYIG-DDRTDEDAFKILRDKKQGLG----ILVSK 320 (354)
T ss_pred CCHHHH-HHHHHHh-cccccCCCCeEEEEc-CCCcHHHHHHHHhhcCCCcc----EEecc
Confidence 467654 5678885 776533 334445 445688887755432 2332 66764
No 349
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=22.68 E-value=3.2e+02 Score=25.10 Aligned_cols=81 Identities=16% Similarity=0.140 Sum_probs=55.7
Q ss_pred cEEEEcCCchHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhccCccCCCcE
Q 024003 160 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 239 (274)
Q Consensus 160 ~laIvTnK~~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~~~~Agv~~ 239 (274)
.+.-+|...++.++.+-++ . + +-.|+|+..-++..-|.+++++.+. ++.+|. +..|+.... ..|...
T Consensus 191 TIC~aT~~RQ~a~~~La~~-v--D--~miVVGg~~SsNT~rL~eia~~~~~---~t~~Ie-~~~el~~~~----~~~~~~ 257 (281)
T PRK12360 191 TICSATKKRQESAKELSKE-V--D--VMIVIGGKHSSNTQKLVKICEKNCP---NTFHIE-TADELDLEM----LKDYKI 257 (281)
T ss_pred CcchhhhhHHHHHHHHHHh-C--C--EEEEecCCCCccHHHHHHHHHHHCC---CEEEEC-ChHHCCHHH----hCCCCE
Confidence 4566777888877777653 2 2 2356676544778888888888763 367774 456776543 267889
Q ss_pred EEEeCCCCChHHHH
Q 024003 240 YLVDWGYNTPKERA 253 (274)
Q Consensus 240 i~v~wGy~~~~~l~ 253 (274)
||++=|-.+++.+-
T Consensus 258 VGitaGASTP~~li 271 (281)
T PRK12360 258 IGITAGASTPDWII 271 (281)
T ss_pred EEEEccCCCCHHHH
Confidence 99999998887653
No 350
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes neomycin, kanamycin, gentamicin, and ribostamycin. They are important antibacterial agents. DOIS is a homologue of the dehydroquinate synthase which catalyzes the cyclization of 3-deoxy-D-arabino-heputulosonate-7-phosphate to dehydroquinate (DHQ) in the shikimate pathway.
Probab=22.53 E-value=4.7e+02 Score=24.61 Aligned_cols=93 Identities=13% Similarity=0.136 Sum_probs=49.9
Q ss_pred HHHHhCC-CcEEEEcCCchH--H---HHHHHHHHhCCCCCCceEe-cCCCCCcHHHHHHHHhh---CCCCCCc-EEEEcC
Q 024003 152 DALKLAS-SRIYIVTSNQSR--F---VETLLRELAGVTITPDRLY-GLGTGPKVNVLKQLQKK---PEHQGLR-LHFVED 220 (274)
Q Consensus 152 e~L~~~g-~~laIvTnK~~~--~---~~~iL~~~~gl~~~f~~v~-g~~~~pkp~~l~~~l~~---l~~~~~~-~l~VGD 220 (274)
+.|...| -++.|+|.+.-. . +...|+. .|+.. .-.++ +.+..|.-+.+..+++. .+++... ++-||.
T Consensus 16 ~~l~~~g~~rvlvVtd~~v~~~~~~~l~~~L~~-~g~~~-~~~~~~~~e~~k~~~~v~~~~~~~~~~~~dr~~~IIAvGG 93 (355)
T cd08197 16 GYLPELNADKYLLVTDSNVEDLYGHRLLEYLRE-AGAPV-ELLSVPSGEEHKTLSTLSDLVERALALGATRRSVIVALGG 93 (355)
T ss_pred HHHHhcCCCeEEEEECccHHHHHHHHHHHHHHh-cCCce-EEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEECC
Confidence 3444334 578888876532 2 2334443 44431 12234 34444666666665544 4565444 556887
Q ss_pred -ChhHHHHhhccCccCCCcEEEEeCCC
Q 024003 221 -RLATLKNVIKEPELDGWNLYLVDWGY 246 (274)
Q Consensus 221 -s~~Di~aA~~~~~~Agv~~i~v~wGy 246 (274)
+..|+-.+.+.-..-|+|+|.|....
T Consensus 94 Gsv~D~ak~~A~~~~rgip~I~IPTTl 120 (355)
T cd08197 94 GVVGNIAGLLAALLFRGIRLVHIPTTL 120 (355)
T ss_pred cHHHHHHHHHHHHhccCCCEEEecCcc
Confidence 66787755431111378888887743
No 351
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=22.04 E-value=97 Score=27.36 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=55.3
Q ss_pred CCCccHHHHH-H---hCCCcEEEEcCCchH-----HHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcE
Q 024003 145 RLYPGVSDAL-K---LASSRIYIVTSNQSR-----FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 215 (274)
Q Consensus 145 ~lypGv~e~L-~---~~g~~laIvTnK~~~-----~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~ 215 (274)
.+.|.+.-.| + +.|++..|+.+.... ..+..++. +|+.-.|...+|+-.+.+-..+.+.++..|-+.=++
T Consensus 59 ~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~-~gi~~~~P~~~CsL~~~~~p~i~~F~~~fGkP~~ei 137 (217)
T PF02593_consen 59 GLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEE-FGIEVEFPKPFCSLEENGNPQIDEFAEYFGKPKVEI 137 (217)
T ss_pred ccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHh-cCceeecCccccccCCCCChhHHHHHHHhCCceEEE
Confidence 5667776333 3 589999999988777 88889996 999888888888644334445666667788654454
Q ss_pred EEEcCChhHHHH
Q 024003 216 HFVEDRLATLKN 227 (274)
Q Consensus 216 l~VGDs~~Di~a 227 (274)
.+=+|...|++-
T Consensus 138 ~v~~~~I~~V~V 149 (217)
T PF02593_consen 138 EVENGKIKDVKV 149 (217)
T ss_pred EecCCcEEEEEE
Confidence 443444444443
No 352
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=21.83 E-value=3.2e+02 Score=23.29 Aligned_cols=79 Identities=20% Similarity=0.259 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHhCCCCCCceEecCCCCC-cHHHHHHHHhhCCCCCCcEEEEcCChhHHHHhhcc--CccCCCcEEEEeCC
Q 024003 169 SRFVETLLRELAGVTITPDRLYGLGTGP-KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE--PELDGWNLYLVDWG 245 (274)
Q Consensus 169 ~~~~~~iL~~~~gl~~~f~~v~g~~~~p-kp~~l~~~l~~l~~~~~~~l~VGDs~~Di~aA~~~--~~~Agv~~i~v~wG 245 (274)
.+.++.+-+. +|+... .+-...+.+ --+.+..+++++....-+.+..||-..|.+..+.. ...+|+.++.=.||
T Consensus 47 ~e~~~~~A~~-lgipl~--~i~~~~~~e~~~~~l~~~l~~~~~~g~~~vv~G~i~sd~~~~~~e~~~~~~gl~~~~PLW~ 123 (194)
T cd01994 47 HELLELQAEA-MGIPLI--RIEISGEEEDEVEDLKELLRKLKEEGVDAVVFGAILSEYQRTRVERVCERLGLEPLAPLWG 123 (194)
T ss_pred HHHHHHHHHH-cCCcEE--EEeCCCCchHHHHHHHHHHHHHHHcCCCEEEECccccHHHHHHHHHHHHHcCCEEEecccC
Confidence 4566777775 787532 221111111 11233333433322234578889988776543220 11389999999999
Q ss_pred CCChH
Q 024003 246 YNTPK 250 (274)
Q Consensus 246 y~~~~ 250 (274)
....+
T Consensus 124 ~~~~~ 128 (194)
T cd01994 124 RDQEE 128 (194)
T ss_pred CCHHH
Confidence 76544
No 353
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=21.68 E-value=52 Score=24.37 Aligned_cols=15 Identities=40% Similarity=0.366 Sum_probs=12.7
Q ss_pred eEEEecCcccccCHH
Q 024003 4 LYALDFDGVICDSCE 18 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~ 18 (274)
.|+.+=|||.|||=.
T Consensus 41 ~lvL~eDGT~Vd~Ee 55 (79)
T cd06538 41 SLVLDEDGTGVDTEE 55 (79)
T ss_pred EEEEecCCcEEccHH
Confidence 478899999999855
No 354
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=21.56 E-value=54 Score=24.14 Aligned_cols=18 Identities=28% Similarity=0.148 Sum_probs=14.2
Q ss_pred eEEEecCcccccCHHHHHHH
Q 024003 4 LYALDFDGVICDSCEETALS 23 (274)
Q Consensus 4 ~ilFDlDGTLvDS~~di~~a 23 (274)
.|+.+=|||.| | .|+..+
T Consensus 42 ~l~L~eDGTeV-t-EeyF~t 59 (77)
T cd06535 42 RLCLYEDGTEV-T-EEYFPT 59 (77)
T ss_pred EEEEecCCcEe-h-HHHHhc
Confidence 57889999999 5 877643
No 355
>COG4825 Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]
Probab=21.35 E-value=4.9e+02 Score=24.36 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=52.0
Q ss_pred ccHHHHHH-hCCCcEEEEcCCc-hHHHHHHHHHHhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCcEEEEcCChhHH
Q 024003 148 PGVSDALK-LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATL 225 (274)
Q Consensus 148 pGv~e~L~-~~g~~laIvTnK~-~~~~~~iL~~~~gl~~~f~~v~g~~~~pkp~~l~~~l~~l~~~~~~~l~VGDs~~Di 225 (274)
|||.++-. -+|-++.||+--+ .+.--+.|+. | |..|--..+|-+- ..+ .+.+.|.+|+ +.|||-..=-
T Consensus 169 ~gIPD~~n~~~gR~VlIva~~~~~~~dLk~lk~-f-i~ey~pvlIgVdG--aAD----~l~~~GykP~--lIvGdp~~i~ 238 (395)
T COG4825 169 IGIPDLDNDLRGRHVLIVADEPSFEDDLKSLKP-F-IKEYQPVLIGVDG--AAD----VLRKAGYKPQ--LIVGDPDQIS 238 (395)
T ss_pred CCCCcccchhcccEEEEEeCCCChHhHHHHHHH-H-HHhhCCEEEEccc--hHH----HHHHcCCCcc--eeecCcchhh
Confidence 77777776 5777788887443 3333455664 4 6667667777542 222 4557788888 8999975444
Q ss_pred HHhhccCccCCCcEEEEeCC
Q 024003 226 KNVIKEPELDGWNLYLVDWG 245 (274)
Q Consensus 226 ~aA~~~~~~Agv~~i~v~wG 245 (274)
.-|.+ +|...+.-.+-
T Consensus 239 ~~aLR----~ga~vvlpad~ 254 (395)
T COG4825 239 TEALR----CGAKVVLPADA 254 (395)
T ss_pred HHHHh----cccceeeccCC
Confidence 44444 66666655443
No 356
>PF07453 NUMOD1: NUMOD1 domain; InterPro: IPR010896 This helix-turn-helix-containing DNA-binding domain is found associated in homing nucleases [].
Probab=20.69 E-value=63 Score=19.61 Aligned_cols=22 Identities=18% Similarity=0.231 Sum_probs=15.8
Q ss_pred ceEEEecCcccccCHHHHHHHH
Q 024003 3 DLYALDFDGVICDSCEETALSA 24 (274)
Q Consensus 3 ~~ilFDlDGTLvDS~~di~~a~ 24 (274)
+..++|+||..+-+.+-+..|.
T Consensus 2 ~V~~yd~~~~~i~~F~Si~eAa 23 (37)
T PF07453_consen 2 PVYVYDLNTNEIKSFDSIREAA 23 (37)
T ss_pred eEEEEECCCCeEEEEcCHHHHH
Confidence 5789999999986666444433
No 357
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=20.57 E-value=3.2e+02 Score=20.86 Aligned_cols=30 Identities=7% Similarity=0.060 Sum_probs=17.0
Q ss_pred CcHHHHHHHHhhCCCCCCcEEEEcCCh-hHHHH
Q 024003 196 PKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKN 227 (274)
Q Consensus 196 pkp~~l~~~l~~l~~~~~~~l~VGDs~-~Di~a 227 (274)
.|-..+.++++.+ +..+.|.||||- .|.+.
T Consensus 50 ~K~~~i~~i~~~f--P~~kfiLIGDsgq~Dpei 80 (100)
T PF09949_consen 50 HKRDNIERILRDF--PERKFILIGDSGQHDPEI 80 (100)
T ss_pred HHHHHHHHHHHHC--CCCcEEEEeeCCCcCHHH
Confidence 4556666666543 234677777763 44443
No 358
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=20.49 E-value=2.8e+02 Score=24.07 Aligned_cols=61 Identities=15% Similarity=-0.053 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHHHhhhhc--ccCCCCCCCcc-HHHHHH---hCCCcEEEEcCC--chHHHHHHHH
Q 024003 117 NREALIELSGKVRDEWMDTDFT--TWIGANRLYPG-VSDALK---LASSRIYIVTSN--QSRFVETLLR 177 (274)
Q Consensus 117 ~~~~~~~~~~~~r~~~~~~y~~--~~~~~~~lypG-v~e~L~---~~g~~laIvTnK--~~~~~~~iL~ 177 (274)
+.+++-+.+.+.+..|...... --.....+++. +.++++ ++|+.++|.||- +.+..+.++.
T Consensus 20 t~eel~~~~~~~~~f~~~sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~ 88 (213)
T PRK10076 20 TLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAK 88 (213)
T ss_pred CHHHHHHHHHhhhHhhcCCCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHH
Confidence 4555555555555555321000 00112235666 678887 799999999997 5556666665
No 359
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.01 E-value=7.2e+02 Score=24.36 Aligned_cols=81 Identities=15% Similarity=0.140 Sum_probs=55.8
Q ss_pred CCCccHHHHHH----hCCCcEEEE-c-CCchHHHHHHHHHHhCCCCCCceEecCCCC---CcHHHHHHHHhhC-CCCCCc
Q 024003 145 RLYPGVSDALK----LASSRIYIV-T-SNQSRFVETLLRELAGVTITPDRLYGLGTG---PKVNVLKQLQKKP-EHQGLR 214 (274)
Q Consensus 145 ~lypGv~e~L~----~~g~~laIv-T-nK~~~~~~~iL~~~~gl~~~f~~v~g~~~~---pkp~~l~~~l~~l-~~~~~~ 214 (274)
.+=+|+.+-|+ +.+++.+.- | .+|...+..-+++ |.=+ -||.|+-..++ -....+.+..+-- -+.|++
T Consensus 139 TFRagAfDQLkqnA~k~~iP~ygsyte~dpv~ia~egv~~-fKke-~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~ 216 (483)
T KOG0780|consen 139 TFRAGAFDQLKQNATKARVPFYGSYTEADPVKIASEGVDR-FKKE-NFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDE 216 (483)
T ss_pred ccccchHHHHHHHhHhhCCeeEecccccchHHHHHHHHHH-HHhc-CCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCe
Confidence 45589999998 678887775 3 4777777777875 6444 57998876554 3344555544432 467999
Q ss_pred EEEEcCChhHHHH
Q 024003 215 LHFVEDRLATLKN 227 (274)
Q Consensus 215 ~l~VGDs~~Di~a 227 (274)
+|||=|+...-.+
T Consensus 217 vi~VmDasiGQaa 229 (483)
T KOG0780|consen 217 IIFVMDASIGQAA 229 (483)
T ss_pred EEEEEeccccHhH
Confidence 9999998765443
Done!