Query 024008
Match_columns 274
No_of_seqs 176 out of 3117
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 16:35:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024008.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024008hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lcc_A Putative methyl chlorid 100.0 3.3E-28 1.1E-32 200.5 16.5 195 75-269 33-227 (235)
2 2gb4_A Thiopurine S-methyltran 99.9 2.9E-24 9.8E-29 178.6 16.5 175 75-250 33-228 (252)
3 1pjz_A Thiopurine S-methyltran 99.9 4.2E-24 1.5E-28 172.2 14.7 163 88-251 1-178 (203)
4 4gek_A TRNA (CMO5U34)-methyltr 99.9 3.4E-22 1.2E-26 166.9 15.2 152 98-250 60-246 (261)
5 2kw5_A SLR1183 protein; struct 99.9 7.2E-22 2.5E-26 158.6 14.6 187 77-272 1-194 (202)
6 3h2b_A SAM-dependent methyltra 99.9 6.9E-21 2.4E-25 153.0 17.0 148 95-251 31-184 (203)
7 4htf_A S-adenosylmethionine-de 99.9 2.4E-20 8.3E-25 157.7 17.2 153 98-252 58-235 (285)
8 3g2m_A PCZA361.24; SAM-depende 99.8 1.1E-20 3.8E-25 161.0 13.9 159 95-253 69-278 (299)
9 2p7i_A Hypothetical protein; p 99.8 2E-20 6.7E-25 154.6 14.0 137 107-250 41-200 (250)
10 3dtn_A Putative methyltransfer 99.8 4.2E-20 1.4E-24 151.7 15.6 147 107-256 43-221 (234)
11 3e23_A Uncharacterized protein 99.8 2.5E-20 8.6E-25 150.7 14.1 150 95-252 31-185 (211)
12 3sm3_A SAM-dependent methyltra 99.8 1.7E-20 5.7E-25 153.8 13.2 148 107-254 29-212 (235)
13 3ccf_A Cyclopropane-fatty-acyl 99.8 6.8E-20 2.3E-24 154.5 16.5 162 97-268 48-229 (279)
14 2o57_A Putative sarcosine dime 99.8 1.6E-19 5.4E-24 153.6 18.6 143 107-251 81-236 (297)
15 2xvm_A Tellurite resistance pr 99.8 1.5E-19 5.1E-24 144.4 17.3 164 74-249 7-173 (199)
16 3hem_A Cyclopropane-fatty-acyl 99.8 1.6E-19 5.5E-24 154.0 18.2 153 98-252 61-246 (302)
17 3ujc_A Phosphoethanolamine N-m 99.8 1.5E-19 5.3E-24 150.8 17.7 155 95-252 41-209 (266)
18 3ou2_A SAM-dependent methyltra 99.8 1.6E-19 5.4E-24 146.4 17.1 149 96-250 35-206 (218)
19 3ocj_A Putative exported prote 99.8 1.4E-19 4.8E-24 154.6 17.6 144 106-249 116-291 (305)
20 3hnr_A Probable methyltransfer 99.8 6.4E-20 2.2E-24 149.1 14.8 139 107-250 44-202 (220)
21 3dh0_A SAM dependent methyltra 99.8 6.1E-20 2.1E-24 149.1 13.4 141 107-250 36-182 (219)
22 3vc1_A Geranyl diphosphate 2-C 99.8 1.8E-19 6E-24 154.5 16.9 141 107-250 116-270 (312)
23 3jwg_A HEN1, methyltransferase 99.8 1.1E-19 3.7E-24 147.8 14.7 160 107-267 28-209 (219)
24 1nkv_A Hypothetical protein YJ 99.8 1.7E-19 5.7E-24 150.0 16.0 152 95-248 22-186 (256)
25 1vl5_A Unknown conserved prote 99.8 2.2E-19 7.5E-24 149.8 16.7 143 107-252 36-193 (260)
26 3l8d_A Methyltransferase; stru 99.8 8.9E-20 3E-24 150.3 14.1 141 106-252 51-203 (242)
27 3kkz_A Uncharacterized protein 99.8 6.1E-19 2.1E-23 147.7 19.2 153 95-250 31-197 (267)
28 1kpg_A CFA synthase;, cyclopro 99.8 1.9E-19 6.6E-24 152.3 16.1 152 98-251 53-230 (287)
29 2ex4_A Adrenal gland protein A 99.8 1.8E-19 6.2E-24 148.7 15.3 142 108-250 79-226 (241)
30 3bus_A REBM, methyltransferase 99.8 2.4E-19 8.2E-24 150.5 16.0 154 98-253 50-220 (273)
31 2a14_A Indolethylamine N-methy 99.8 2.2E-20 7.5E-25 156.3 9.6 177 74-250 17-239 (263)
32 3pfg_A N-methyltransferase; N, 99.8 2.4E-19 8.3E-24 149.8 15.6 145 98-248 40-236 (263)
33 3jwh_A HEN1; methyltransferase 99.8 3.3E-19 1.1E-23 144.8 15.7 140 107-246 28-189 (217)
34 1xxl_A YCGJ protein; structura 99.8 4.7E-19 1.6E-23 146.1 16.2 144 106-252 19-177 (239)
35 3g5l_A Putative S-adenosylmeth 99.8 2.6E-19 8.9E-24 148.7 14.7 142 107-254 43-221 (253)
36 1xtp_A LMAJ004091AAA; SGPP, st 99.8 5.6E-19 1.9E-23 146.6 16.4 150 98-250 82-239 (254)
37 3m70_A Tellurite resistance pr 99.8 8.3E-19 2.8E-23 148.4 17.4 149 95-249 109-260 (286)
38 3dlc_A Putative S-adenosyl-L-m 99.8 4E-20 1.4E-24 149.8 8.7 150 99-250 34-204 (219)
39 1y8c_A S-adenosylmethionine-de 99.8 1.8E-19 6.2E-24 148.6 12.3 152 96-249 25-225 (246)
40 3f4k_A Putative methyltransfer 99.8 6.8E-19 2.3E-23 146.4 15.8 153 96-251 32-198 (257)
41 3dli_A Methyltransferase; PSI- 99.8 2.5E-19 8.6E-24 147.7 12.7 135 107-250 40-185 (240)
42 2fk8_A Methoxy mycolic acid sy 99.8 9E-19 3.1E-23 150.4 16.3 152 98-251 79-256 (318)
43 3e8s_A Putative SAM dependent 99.8 1.8E-19 6E-24 146.8 10.7 135 107-251 51-211 (227)
44 3ggd_A SAM-dependent methyltra 99.8 7.2E-19 2.5E-23 145.3 14.0 141 106-252 54-222 (245)
45 3dp7_A SAM-dependent methyltra 99.8 1.7E-18 5.8E-23 151.4 16.6 140 108-248 179-341 (363)
46 2p8j_A S-adenosylmethionine-de 99.8 7E-19 2.4E-23 141.7 13.0 142 107-250 22-184 (209)
47 2r3s_A Uncharacterized protein 99.8 2.8E-18 9.5E-23 148.3 16.9 143 107-250 164-324 (335)
48 3i53_A O-methyltransferase; CO 99.8 3.7E-18 1.3E-22 147.5 17.3 140 109-250 170-322 (332)
49 2i62_A Nicotinamide N-methyltr 99.8 7.3E-19 2.5E-23 146.7 11.9 177 75-251 19-241 (265)
50 3cgg_A SAM-dependent methyltra 99.8 1.7E-18 5.9E-23 137.5 13.5 131 106-250 44-176 (195)
51 3i9f_A Putative type 11 methyl 99.8 1.2E-18 4E-23 135.9 12.3 132 107-250 16-149 (170)
52 1ri5_A MRNA capping enzyme; me 99.8 2.7E-18 9.1E-23 145.7 15.2 147 106-252 62-253 (298)
53 3gwz_A MMCR; methyltransferase 99.8 7.5E-18 2.6E-22 147.6 18.3 139 108-248 202-355 (369)
54 3gu3_A Methyltransferase; alph 99.8 3.4E-18 1.2E-22 144.6 15.4 146 107-257 21-202 (284)
55 3mgg_A Methyltransferase; NYSG 99.8 2.2E-18 7.6E-23 144.9 14.0 158 95-255 22-204 (276)
56 3mcz_A O-methyltransferase; ad 99.8 4.4E-18 1.5E-22 148.1 16.3 146 100-246 169-336 (352)
57 2p35_A Trans-aconitate 2-methy 99.8 5.3E-18 1.8E-22 141.1 15.4 162 97-268 21-207 (259)
58 3bkw_A MLL3908 protein, S-aden 99.8 2.4E-18 8.1E-23 141.8 12.7 137 107-249 42-214 (243)
59 3mti_A RRNA methylase; SAM-dep 99.8 4.7E-18 1.6E-22 134.4 14.0 153 95-250 9-170 (185)
60 3ege_A Putative methyltransfer 99.8 1.5E-18 5.3E-23 144.9 11.7 140 107-257 33-186 (261)
61 2g72_A Phenylethanolamine N-me 99.8 4.9E-18 1.7E-22 143.9 14.6 154 98-251 61-258 (289)
62 2yqz_A Hypothetical protein TT 99.8 8.4E-18 2.9E-22 140.1 15.1 141 107-252 38-199 (263)
63 3bxo_A N,N-dimethyltransferase 99.8 8.8E-18 3E-22 138.0 14.8 145 98-248 30-226 (239)
64 3g07_A 7SK snRNA methylphospha 99.8 2.5E-18 8.6E-23 146.0 11.5 143 107-249 45-269 (292)
65 1ve3_A Hypothetical protein PH 99.8 1E-17 3.5E-22 136.5 14.6 142 107-250 37-216 (227)
66 2ip2_A Probable phenazine-spec 99.8 8E-18 2.7E-22 145.4 14.7 149 99-249 158-322 (334)
67 3d2l_A SAM-dependent methyltra 99.8 1.1E-17 3.6E-22 137.8 14.5 140 107-249 32-223 (243)
68 1x19_A CRTF-related protein; m 99.8 3.2E-17 1.1E-21 143.1 18.4 150 99-250 180-349 (359)
69 2pxx_A Uncharacterized protein 99.8 1.1E-17 3.8E-22 135.0 14.3 153 74-241 6-175 (215)
70 3ofk_A Nodulation protein S; N 99.8 1E-17 3.6E-22 135.6 13.7 128 107-238 50-178 (216)
71 1qzz_A RDMB, aclacinomycin-10- 99.8 1.3E-17 4.3E-22 146.4 15.1 142 107-250 181-340 (374)
72 4hg2_A Methyltransferase type 99.8 3.7E-18 1.3E-22 142.0 10.7 108 99-216 30-138 (257)
73 3thr_A Glycine N-methyltransfe 99.7 2.3E-17 7.8E-22 139.9 15.3 117 96-214 47-176 (293)
74 4a6d_A Hydroxyindole O-methylt 99.7 1.3E-16 4.3E-21 139.0 20.3 147 100-249 170-334 (353)
75 3njr_A Precorrin-6Y methylase; 99.7 2.2E-17 7.7E-22 132.8 14.3 128 106-250 53-181 (204)
76 3bkx_A SAM-dependent methyltra 99.7 1.5E-17 5.2E-22 139.6 13.6 142 106-249 41-219 (275)
77 4fsd_A Arsenic methyltransfera 99.7 1.2E-17 4.1E-22 147.0 13.5 141 107-249 82-251 (383)
78 3q87_B N6 adenine specific DNA 99.7 2.2E-17 7.7E-22 129.0 13.5 125 107-253 22-153 (170)
79 3cc8_A Putative methyltransfer 99.7 5.1E-17 1.7E-21 132.4 16.2 137 107-253 31-189 (230)
80 3orh_A Guanidinoacetate N-meth 99.7 1.2E-18 4.1E-23 143.4 6.5 156 96-255 48-216 (236)
81 3grz_A L11 mtase, ribosomal pr 99.7 1.1E-17 3.9E-22 134.4 12.0 127 106-249 58-185 (205)
82 1tw3_A COMT, carminomycin 4-O- 99.7 2.6E-17 8.8E-22 143.7 14.9 142 107-250 182-340 (360)
83 1wzn_A SAM-dependent methyltra 99.7 5.7E-17 1.9E-21 134.4 15.6 116 96-213 28-145 (252)
84 3lst_A CALO1 methyltransferase 99.7 4.5E-17 1.5E-21 141.6 14.6 136 108-248 184-335 (348)
85 3g5t_A Trans-aconitate 3-methy 99.7 5.2E-17 1.8E-21 138.2 14.2 142 98-242 26-197 (299)
86 3evz_A Methyltransferase; NYSG 99.7 7.6E-17 2.6E-21 131.8 14.5 136 102-248 49-205 (230)
87 2vdw_A Vaccinia virus capping 99.7 2.6E-17 9E-22 140.1 12.1 143 108-250 48-247 (302)
88 1zx0_A Guanidinoacetate N-meth 99.7 5.4E-18 1.8E-22 139.4 7.5 136 106-243 58-204 (236)
89 1vlm_A SAM-dependent methyltra 99.7 6.7E-17 2.3E-21 131.3 13.7 128 109-250 48-189 (219)
90 2b3t_A Protein methyltransfera 99.7 7.3E-17 2.5E-21 135.8 13.9 140 97-248 98-262 (276)
91 2nxc_A L11 mtase, ribosomal pr 99.7 2.4E-17 8.3E-22 137.1 10.7 133 100-249 112-244 (254)
92 2gs9_A Hypothetical protein TT 99.7 2.5E-16 8.5E-21 127.0 16.3 129 99-240 27-171 (211)
93 3e05_A Precorrin-6Y C5,15-meth 99.7 1.5E-16 5E-21 127.8 14.6 132 99-247 30-165 (204)
94 3hm2_A Precorrin-6Y C5,15-meth 99.7 9.8E-17 3.4E-21 125.7 12.8 126 107-249 24-153 (178)
95 1yzh_A TRNA (guanine-N(7)-)-me 99.7 7.4E-17 2.5E-21 130.6 12.4 131 107-248 40-181 (214)
96 3lpm_A Putative methyltransfer 99.7 1.9E-16 6.4E-21 132.0 14.9 132 108-250 49-202 (259)
97 3eey_A Putative rRNA methylase 99.7 1E-16 3.5E-21 127.9 12.7 148 99-251 13-175 (197)
98 1dus_A MJ0882; hypothetical pr 99.7 3.3E-16 1.1E-20 124.1 15.3 133 96-239 39-173 (194)
99 3reo_A (ISO)eugenol O-methyltr 99.7 3.2E-16 1.1E-20 137.2 15.8 132 109-250 204-356 (368)
100 1l3i_A Precorrin-6Y methyltran 99.7 1.6E-16 5.6E-21 125.7 12.2 126 106-246 31-157 (192)
101 1jsx_A Glucose-inhibited divis 99.7 3.7E-16 1.3E-20 125.6 14.2 123 108-250 65-189 (207)
102 2aot_A HMT, histamine N-methyl 99.7 2.2E-16 7.4E-21 134.0 13.4 138 108-247 52-219 (292)
103 3fzg_A 16S rRNA methylase; met 99.7 8E-17 2.7E-21 125.7 9.7 135 107-245 48-184 (200)
104 3fpf_A Mtnas, putative unchara 99.7 8.3E-17 2.8E-21 135.0 10.4 103 106-215 120-224 (298)
105 3bgv_A MRNA CAP guanine-N7 met 99.7 2.8E-16 9.6E-21 134.5 14.0 142 107-248 33-231 (313)
106 2frn_A Hypothetical protein PH 99.7 2.1E-16 7E-21 133.2 12.4 133 106-248 123-256 (278)
107 1xdz_A Methyltransferase GIDB; 99.7 1.7E-16 5.9E-21 130.8 11.6 130 108-252 70-205 (240)
108 2qe6_A Uncharacterized protein 99.7 4.3E-16 1.5E-20 130.9 14.1 132 109-245 78-238 (274)
109 3p9c_A Caffeic acid O-methyltr 99.7 5E-16 1.7E-20 135.7 14.9 133 108-250 201-354 (364)
110 3m33_A Uncharacterized protein 99.7 7.7E-17 2.6E-21 131.7 9.0 134 95-253 35-171 (226)
111 3htx_A HEN1; HEN1, small RNA m 99.7 9.6E-16 3.3E-20 142.7 17.2 159 107-267 720-916 (950)
112 3iv6_A Putative Zn-dependent a 99.7 3.6E-16 1.2E-20 129.8 12.9 115 98-215 34-150 (261)
113 2yxd_A Probable cobalt-precorr 99.7 3.2E-16 1.1E-20 123.1 11.8 124 107-249 34-157 (183)
114 4df3_A Fibrillarin-like rRNA/T 99.7 1.3E-15 4.3E-20 124.1 15.2 136 106-249 75-217 (233)
115 3kr9_A SAM-dependent methyltra 99.7 1.7E-15 5.7E-20 122.7 15.2 134 97-247 5-141 (225)
116 3dmg_A Probable ribosomal RNA 99.7 1.7E-15 6E-20 132.7 16.5 135 107-252 232-376 (381)
117 3lec_A NADB-rossmann superfami 99.7 1.5E-15 5.2E-20 123.2 14.9 136 95-247 9-147 (230)
118 1fp1_D Isoliquiritigenin 2'-O- 99.7 7.3E-16 2.5E-20 135.1 13.3 132 108-249 209-360 (372)
119 3g89_A Ribosomal RNA small sub 99.7 2.8E-16 9.7E-21 130.2 9.9 130 108-252 80-215 (249)
120 1fbn_A MJ fibrillarin homologu 99.7 7.9E-16 2.7E-20 126.0 12.4 133 108-249 74-213 (230)
121 2fca_A TRNA (guanine-N(7)-)-me 99.7 6.1E-16 2.1E-20 125.2 11.4 131 107-248 37-178 (213)
122 1fp2_A Isoflavone O-methyltran 99.7 5.5E-16 1.9E-20 134.9 11.9 131 108-248 188-340 (352)
123 4e2x_A TCAB9; kijanose, tetron 99.7 1.7E-16 5.7E-21 141.2 8.6 147 98-250 96-254 (416)
124 3p9n_A Possible methyltransfer 99.7 1.3E-15 4.4E-20 120.9 12.7 108 107-216 43-156 (189)
125 3p2e_A 16S rRNA methylase; met 99.6 1.7E-16 5.6E-21 129.6 7.0 146 106-252 22-188 (225)
126 3gnl_A Uncharacterized protein 99.6 2.8E-15 9.6E-20 122.6 14.0 136 95-247 9-147 (244)
127 4dzr_A Protein-(glutamine-N5) 99.6 6.5E-17 2.2E-21 130.4 4.2 130 107-248 29-191 (215)
128 2ozv_A Hypothetical protein AT 99.6 2.5E-15 8.4E-20 125.3 13.1 130 107-248 35-193 (260)
129 3bzb_A Uncharacterized protein 99.6 6.5E-15 2.2E-19 124.2 15.5 135 107-248 78-236 (281)
130 3mb5_A SAM-dependent methyltra 99.6 8.3E-16 2.8E-20 127.6 9.3 125 107-248 92-221 (255)
131 3lbf_A Protein-L-isoaspartate 99.6 4.9E-15 1.7E-19 119.3 12.7 101 106-215 75-176 (210)
132 2zfu_A Nucleomethylin, cerebra 99.6 2.2E-15 7.6E-20 121.8 10.6 112 107-248 66-178 (215)
133 1yb2_A Hypothetical protein TA 99.6 1.3E-15 4.6E-20 128.0 9.5 124 107-248 109-236 (275)
134 2ipx_A RRNA 2'-O-methyltransfe 99.6 2E-15 6.7E-20 123.8 10.2 134 107-248 76-216 (233)
135 2avn_A Ubiquinone/menaquinone 99.6 4.1E-15 1.4E-19 123.9 12.2 143 98-251 44-215 (260)
136 3ntv_A MW1564 protein; rossman 99.6 2.3E-15 7.9E-20 123.4 10.5 102 107-213 70-176 (232)
137 1g8a_A Fibrillarin-like PRE-rR 99.6 1.1E-14 3.9E-19 118.7 14.3 133 108-249 73-212 (227)
138 4dcm_A Ribosomal RNA large sub 99.6 6.5E-15 2.2E-19 128.9 13.6 120 95-214 208-335 (375)
139 2ift_A Putative methylase HI07 99.6 1.8E-15 6.1E-20 121.3 9.1 106 108-216 53-166 (201)
140 3id6_C Fibrillarin-like rRNA/T 99.6 2.3E-14 7.8E-19 116.9 15.8 136 106-249 74-216 (232)
141 3bwc_A Spermidine synthase; SA 99.6 5.2E-15 1.8E-19 126.1 12.2 139 107-251 94-242 (304)
142 1nt2_A Fibrillarin-like PRE-rR 99.6 4.2E-15 1.4E-19 120.0 10.9 131 107-250 56-196 (210)
143 1zg3_A Isoflavanone 4'-O-methy 99.6 5.8E-15 2E-19 128.7 12.6 131 108-248 193-346 (358)
144 1af7_A Chemotaxis receptor met 99.6 3.4E-15 1.2E-19 124.9 10.6 137 74-212 68-251 (274)
145 2igt_A SAM dependent methyltra 99.6 6.3E-15 2.2E-19 126.9 12.6 134 108-250 153-304 (332)
146 3giw_A Protein of unknown func 99.6 6.7E-15 2.3E-19 122.1 12.1 133 110-245 80-243 (277)
147 3hp7_A Hemolysin, putative; st 99.6 1.1E-15 3.7E-20 128.4 7.4 159 97-268 72-249 (291)
148 2fhp_A Methylase, putative; al 99.6 4.7E-15 1.6E-19 117.0 10.0 107 107-216 43-157 (187)
149 3dxy_A TRNA (guanine-N(7)-)-me 99.6 3.1E-15 1.1E-19 121.4 8.7 105 108-213 34-150 (218)
150 3q7e_A Protein arginine N-meth 99.6 5.7E-15 1.9E-19 128.3 10.8 104 107-211 65-171 (349)
151 2esr_A Methyltransferase; stru 99.6 5.2E-15 1.8E-19 115.9 9.5 107 107-216 30-141 (177)
152 1o9g_A RRNA methyltransferase; 99.6 3.5E-15 1.2E-19 123.6 8.9 107 108-214 51-215 (250)
153 1ws6_A Methyltransferase; stru 99.6 3.5E-15 1.2E-19 116.0 8.3 103 108-216 41-150 (171)
154 3mq2_A 16S rRNA methyltransfer 99.6 5.7E-15 2E-19 119.7 9.9 142 106-251 25-186 (218)
155 2y1w_A Histone-arginine methyl 99.6 9.9E-15 3.4E-19 126.7 12.0 105 107-212 49-154 (348)
156 1o54_A SAM-dependent O-methylt 99.6 8E-15 2.7E-19 123.3 10.7 125 107-248 111-238 (277)
157 3gdh_A Trimethylguanosine synt 99.6 1.7E-16 5.8E-21 130.7 0.2 136 108-245 78-215 (241)
158 2pwy_A TRNA (adenine-N(1)-)-me 99.6 9.2E-15 3.2E-19 121.3 10.7 124 107-248 95-223 (258)
159 1vbf_A 231AA long hypothetical 99.6 1.6E-14 5.5E-19 118.0 12.0 106 100-216 61-168 (231)
160 3u81_A Catechol O-methyltransf 99.6 6.6E-15 2.3E-19 119.7 9.5 127 107-246 57-194 (221)
161 3r0q_C Probable protein argini 99.6 1.1E-14 3.7E-19 127.8 11.5 106 107-213 62-169 (376)
162 1wy7_A Hypothetical protein PH 99.6 5.2E-14 1.8E-18 113.0 14.4 130 107-252 48-178 (207)
163 4hc4_A Protein arginine N-meth 99.6 9.5E-15 3.3E-19 127.2 10.6 104 107-211 82-187 (376)
164 3k6r_A Putative transferase PH 99.6 2.2E-14 7.4E-19 120.0 12.2 133 106-248 123-256 (278)
165 2fyt_A Protein arginine N-meth 99.6 1.7E-14 5.8E-19 124.8 11.9 103 107-210 63-168 (340)
166 2fpo_A Methylase YHHF; structu 99.6 9.4E-15 3.2E-19 117.2 9.5 105 108-216 54-163 (202)
167 3tfw_A Putative O-methyltransf 99.6 2.6E-14 8.7E-19 118.3 12.3 103 107-214 62-171 (248)
168 3duw_A OMT, O-methyltransferas 99.6 1E-14 3.5E-19 118.6 9.5 102 107-213 57-167 (223)
169 3tr6_A O-methyltransferase; ce 99.6 7.1E-15 2.4E-19 119.6 8.0 103 107-214 63-175 (225)
170 3dr5_A Putative O-methyltransf 99.6 1E-14 3.5E-19 118.7 8.8 99 110-213 58-163 (221)
171 2h00_A Methyltransferase 10 do 99.5 2.9E-13 9.8E-18 112.2 17.2 143 108-250 65-239 (254)
172 2yxe_A Protein-L-isoaspartate 99.5 3E-14 1E-18 115.1 10.9 100 107-215 76-179 (215)
173 3b3j_A Histone-arginine methyl 99.5 2.2E-14 7.4E-19 129.3 11.0 104 107-211 157-261 (480)
174 3tm4_A TRNA (guanine N2-)-meth 99.5 1E-13 3.5E-18 121.4 14.1 129 106-249 215-352 (373)
175 1g6q_1 HnRNP arginine N-methyl 99.5 3.1E-14 1.1E-18 122.6 10.7 103 107-210 37-142 (328)
176 2pjd_A Ribosomal RNA small sub 99.5 2.9E-14 9.9E-19 123.6 10.5 115 97-214 184-304 (343)
177 1p91_A Ribosomal RNA large sub 99.5 7.1E-14 2.4E-18 116.8 12.6 141 107-268 84-233 (269)
178 3ckk_A TRNA (guanine-N(7)-)-me 99.5 6.5E-14 2.2E-18 114.9 11.9 126 108-244 46-190 (235)
179 1sui_A Caffeoyl-COA O-methyltr 99.5 3.1E-14 1E-18 117.8 10.1 102 107-213 78-190 (247)
180 3lcv_B Sisomicin-gentamicin re 99.5 4.4E-14 1.5E-18 115.3 10.6 139 107-248 131-271 (281)
181 1ne2_A Hypothetical protein TA 99.5 1.5E-13 5.2E-18 109.7 13.7 123 107-252 50-173 (200)
182 3tma_A Methyltransferase; thum 99.5 1E-13 3.5E-18 120.7 13.5 127 107-248 202-338 (354)
183 3r3h_A O-methyltransferase, SA 99.5 6.4E-15 2.2E-19 121.5 5.6 103 107-214 59-171 (242)
184 1nv8_A HEMK protein; class I a 99.5 5.4E-14 1.8E-18 118.7 11.1 120 108-239 123-264 (284)
185 3uwp_A Histone-lysine N-methyl 99.5 3.6E-14 1.2E-18 123.5 10.0 117 95-214 159-289 (438)
186 2yvl_A TRMI protein, hypotheti 99.5 7.5E-14 2.6E-18 115.1 11.0 124 107-248 90-214 (248)
187 2b78_A Hypothetical protein SM 99.5 1.4E-13 4.7E-18 121.0 13.0 141 107-252 211-365 (385)
188 2gpy_A O-methyltransferase; st 99.5 4.9E-14 1.7E-18 115.4 9.4 102 107-213 53-160 (233)
189 1dl5_A Protein-L-isoaspartate 99.5 6.4E-14 2.2E-18 120.1 10.5 110 98-216 64-178 (317)
190 1jg1_A PIMT;, protein-L-isoasp 99.5 1.1E-13 3.9E-18 113.4 11.3 101 106-215 89-191 (235)
191 3c3p_A Methyltransferase; NP_9 99.5 5E-14 1.7E-18 113.5 8.8 100 108-213 56-160 (210)
192 3adn_A Spermidine synthase; am 99.5 1.8E-13 6.1E-18 115.8 12.2 108 107-214 82-199 (294)
193 2qm3_A Predicted methyltransfe 99.5 4.3E-13 1.5E-17 117.5 15.0 129 107-249 171-309 (373)
194 3frh_A 16S rRNA methylase; met 99.5 2.8E-13 9.5E-18 109.6 12.1 135 107-245 104-238 (253)
195 3c3y_A Pfomt, O-methyltransfer 99.5 5.1E-14 1.7E-18 115.7 8.1 102 107-213 69-181 (237)
196 2hnk_A SAM-dependent O-methylt 99.5 1E-13 3.5E-18 114.0 9.8 102 107-213 59-181 (239)
197 3opn_A Putative hemolysin; str 99.5 9.8E-15 3.4E-19 119.5 3.6 147 97-252 24-187 (232)
198 2ld4_A Anamorsin; methyltransf 99.5 7E-14 2.4E-18 109.4 8.0 119 106-248 10-133 (176)
199 1ixk_A Methyltransferase; open 99.5 3.6E-13 1.2E-17 115.3 13.0 134 106-247 116-273 (315)
200 3cbg_A O-methyltransferase; cy 99.5 1.1E-13 3.7E-18 113.4 9.2 103 107-214 71-183 (232)
201 2yx1_A Hypothetical protein MJ 99.5 2.5E-13 8.5E-18 117.3 11.7 123 107-249 194-317 (336)
202 1u2z_A Histone-lysine N-methyl 99.5 3.6E-13 1.2E-17 119.2 12.9 114 97-213 230-359 (433)
203 1i1n_A Protein-L-isoaspartate 99.5 3.9E-13 1.3E-17 109.4 12.3 102 106-215 75-184 (226)
204 1i9g_A Hypothetical protein RV 99.5 1.7E-13 5.8E-18 115.2 10.3 132 100-248 90-229 (280)
205 3ajd_A Putative methyltransfer 99.5 2.7E-13 9.2E-18 113.8 11.3 143 95-247 72-239 (274)
206 2pbf_A Protein-L-isoaspartate 99.5 1.6E-13 5.4E-18 111.8 9.6 102 106-215 78-195 (227)
207 2avd_A Catechol-O-methyltransf 99.5 9.3E-14 3.2E-18 113.3 8.1 102 107-213 68-179 (229)
208 3c0k_A UPF0064 protein YCCW; P 99.5 2.5E-13 8.4E-18 120.0 11.1 137 107-248 219-369 (396)
209 3a27_A TYW2, uncharacterized p 99.5 2.9E-13 9.9E-18 113.5 10.9 105 106-217 117-223 (272)
210 2as0_A Hypothetical protein PH 99.5 4.2E-13 1.4E-17 118.5 12.4 144 99-247 208-364 (396)
211 4azs_A Methyltransferase WBDD; 99.5 7.7E-14 2.6E-18 128.6 7.8 107 108-215 66-175 (569)
212 1r18_A Protein-L-isoaspartate( 99.4 1.8E-13 6E-18 111.7 8.3 102 106-215 82-196 (227)
213 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.2E-12 3.9E-17 116.9 14.2 143 107-268 285-432 (433)
214 2f8l_A Hypothetical protein LM 99.4 1.2E-13 4.3E-18 119.6 7.3 128 108-243 130-280 (344)
215 2pt6_A Spermidine synthase; tr 99.4 5.2E-13 1.8E-17 114.4 11.1 133 108-248 116-258 (321)
216 3v97_A Ribosomal RNA large sub 99.4 5.2E-13 1.8E-17 125.5 11.8 135 107-252 538-685 (703)
217 1wxx_A TT1595, hypothetical pr 99.4 5.7E-13 2E-17 117.1 11.2 135 108-248 209-355 (382)
218 4dmg_A Putative uncharacterize 99.4 1.5E-12 5.2E-17 114.3 13.9 143 99-248 205-356 (393)
219 2i7c_A Spermidine synthase; tr 99.4 1.2E-12 4E-17 110.4 12.6 134 107-247 77-219 (283)
220 2vdv_E TRNA (guanine-N(7)-)-me 99.4 8.2E-13 2.8E-17 109.0 11.4 123 108-241 49-191 (246)
221 1iy9_A Spermidine synthase; ro 99.4 7.3E-13 2.5E-17 111.2 11.2 134 108-248 75-217 (275)
222 2b25_A Hypothetical protein; s 99.4 8E-13 2.7E-17 114.2 11.7 103 106-215 103-221 (336)
223 1ej0_A FTSJ; methyltransferase 99.4 4.9E-13 1.7E-17 104.0 9.0 118 107-247 21-159 (180)
224 1mjf_A Spermidine synthase; sp 99.4 5.9E-13 2E-17 112.1 9.7 106 107-213 74-193 (281)
225 3gjy_A Spermidine synthase; AP 99.4 8.1E-13 2.8E-17 112.2 10.1 104 110-214 91-201 (317)
226 1uir_A Polyamine aminopropyltr 99.4 1.4E-12 4.8E-17 111.5 11.6 134 107-246 76-222 (314)
227 2b2c_A Spermidine synthase; be 99.4 4.8E-13 1.6E-17 114.2 8.5 105 108-213 108-222 (314)
228 1xj5_A Spermidine synthase 1; 99.4 1.1E-12 3.6E-17 112.9 10.5 107 107-213 119-235 (334)
229 2o07_A Spermidine synthase; st 99.4 9.7E-13 3.3E-17 111.9 10.1 107 107-213 94-209 (304)
230 1inl_A Spermidine synthase; be 99.4 9.3E-13 3.2E-17 111.7 9.8 134 108-248 90-233 (296)
231 2plw_A Ribosomal RNA methyltra 99.4 3.9E-12 1.3E-16 101.4 12.9 117 107-246 21-176 (201)
232 1zq9_A Probable dimethyladenos 99.4 9.7E-13 3.3E-17 111.0 9.3 111 98-210 17-144 (285)
233 3dou_A Ribosomal RNA large sub 99.4 6.7E-12 2.3E-16 99.6 13.1 119 107-248 24-163 (191)
234 2bm8_A Cephalosporin hydroxyla 99.4 3.8E-13 1.3E-17 110.5 5.1 120 108-244 81-214 (236)
235 3bt7_A TRNA (uracil-5-)-methyl 99.4 1.6E-12 5.3E-17 113.7 8.7 145 101-267 206-368 (369)
236 3m6w_A RRNA methylase; rRNA me 99.4 3.1E-12 1.1E-16 114.2 10.8 142 95-247 90-257 (464)
237 2yxl_A PH0851 protein, 450AA l 99.3 1.2E-11 4E-16 110.9 14.3 134 106-247 257-417 (450)
238 3sso_A Methyltransferase; macr 99.3 1.9E-12 6.5E-17 112.4 8.7 109 95-216 203-327 (419)
239 3m4x_A NOL1/NOP2/SUN family pr 99.3 4.4E-12 1.5E-16 113.1 11.0 143 95-247 94-261 (456)
240 2jjq_A Uncharacterized RNA met 99.3 2.8E-11 9.5E-16 107.4 15.7 99 107-213 289-387 (425)
241 2ih2_A Modification methylase 99.3 1.1E-11 3.6E-16 110.2 10.1 132 94-241 24-186 (421)
242 2wa2_A Non-structural protein 99.3 3.6E-12 1.2E-16 106.8 6.3 114 98-215 71-195 (276)
243 2h1r_A Dimethyladenosine trans 99.3 3.2E-11 1.1E-15 102.3 11.9 78 107-186 41-118 (299)
244 2xyq_A Putative 2'-O-methyl tr 99.3 1.9E-11 6.6E-16 102.7 10.2 115 107-247 62-195 (290)
245 2oxt_A Nucleoside-2'-O-methylt 99.3 4.7E-12 1.6E-16 105.5 6.2 117 95-215 60-187 (265)
246 2frx_A Hypothetical protein YE 99.3 4.6E-11 1.6E-15 107.5 12.9 125 108-240 117-266 (479)
247 2cmg_A Spermidine synthase; tr 99.2 9.6E-12 3.3E-16 103.5 7.2 97 108-213 72-171 (262)
248 1sqg_A SUN protein, FMU protei 99.2 7.8E-11 2.7E-15 105.0 13.3 131 106-245 244-400 (429)
249 2nyu_A Putative ribosomal RNA 99.2 5.6E-11 1.9E-15 94.2 10.7 117 107-246 21-167 (196)
250 2okc_A Type I restriction enzy 99.2 1.5E-11 5.3E-16 110.0 8.3 122 93-214 155-308 (445)
251 3k0b_A Predicted N6-adenine-sp 99.2 5.4E-11 1.9E-15 104.5 11.5 113 101-213 193-350 (393)
252 3ldg_A Putative uncharacterize 99.2 9.2E-11 3.2E-15 102.6 12.8 113 101-213 186-343 (384)
253 3ldu_A Putative methylase; str 99.2 7.9E-11 2.7E-15 103.3 12.4 113 101-213 187-344 (385)
254 2p41_A Type II methyltransfera 99.2 9.5E-12 3.2E-16 105.8 5.2 115 97-216 70-194 (305)
255 1qam_A ERMC' methyltransferase 99.2 1.1E-10 3.6E-15 96.2 10.2 87 95-185 16-105 (244)
256 3b5i_A S-adenosyl-L-methionine 99.1 9.9E-10 3.4E-14 95.4 15.0 162 109-270 53-327 (374)
257 3gru_A Dimethyladenosine trans 99.1 1.9E-10 6.6E-15 97.0 9.7 88 96-186 37-126 (295)
258 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.6E-09 5.5E-14 92.1 15.0 141 95-246 91-262 (309)
259 3cvo_A Methyltransferase-like 99.1 5.7E-10 2E-14 88.5 11.0 96 108-212 30-153 (202)
260 3axs_A Probable N(2),N(2)-dime 99.1 1.3E-10 4.4E-15 101.7 7.2 100 108-213 52-158 (392)
261 2qfm_A Spermine synthase; sper 99.1 3E-10 1E-14 97.6 9.1 108 108-215 188-316 (364)
262 3tqs_A Ribosomal RNA small sub 99.1 2.1E-09 7.3E-14 88.8 13.4 84 98-185 18-107 (255)
263 3fut_A Dimethyladenosine trans 99.1 7.2E-10 2.4E-14 92.4 10.4 96 97-198 35-133 (271)
264 1yub_A Ermam, rRNA methyltrans 99.1 1.9E-11 6.6E-16 100.7 0.3 111 98-213 18-145 (245)
265 2efj_A 3,7-dimethylxanthine me 99.0 3.1E-09 1.1E-13 92.4 13.8 142 109-253 53-296 (384)
266 2dul_A N(2),N(2)-dimethylguano 99.0 4.2E-10 1.4E-14 98.3 8.0 99 108-213 47-164 (378)
267 2r6z_A UPF0341 protein in RSP 99.0 9.5E-11 3.2E-15 97.2 3.6 79 108-186 83-173 (258)
268 1m6e_X S-adenosyl-L-methionnin 99.0 3.4E-09 1.2E-13 91.4 12.8 161 110-270 53-312 (359)
269 3ll7_A Putative methyltransfer 99.0 6.4E-10 2.2E-14 97.6 7.5 88 96-184 81-173 (410)
270 4gqb_A Protein arginine N-meth 99.0 1.3E-09 4.4E-14 100.3 8.9 100 110-210 359-464 (637)
271 2ar0_A M.ecoki, type I restric 98.9 4.5E-09 1.5E-13 96.1 11.2 108 107-214 168-313 (541)
272 3khk_A Type I restriction-modi 98.9 8.2E-10 2.8E-14 100.8 6.1 145 93-241 229-419 (544)
273 3v97_A Ribosomal RNA large sub 98.9 5.8E-09 2E-13 98.1 11.5 108 107-214 189-348 (703)
274 1m6y_A S-adenosyl-methyltransf 98.9 4.1E-09 1.4E-13 89.2 8.2 75 107-183 25-107 (301)
275 2qy6_A UPF0209 protein YFCK; s 98.9 1.5E-09 5E-14 89.9 5.1 127 108-248 60-234 (257)
276 3ua3_A Protein arginine N-meth 98.9 2.3E-09 7.8E-14 98.7 6.3 100 110-210 411-531 (745)
277 3ftd_A Dimethyladenosine trans 98.8 1.1E-08 3.7E-13 84.3 8.6 83 97-185 19-106 (249)
278 3lkd_A Type I restriction-modi 98.8 1.7E-08 5.8E-13 92.0 10.0 130 108-242 221-382 (542)
279 3uzu_A Ribosomal RNA small sub 98.8 2.2E-08 7.4E-13 83.9 9.8 83 98-185 31-125 (279)
280 3o4f_A Spermidine synthase; am 98.8 2.7E-08 9.3E-13 83.2 9.9 107 107-213 82-198 (294)
281 2k4m_A TR8_protein, UPF0146 pr 98.8 1.2E-08 4.1E-13 75.6 6.2 97 97-216 24-124 (153)
282 2oyr_A UPF0341 protein YHIQ; a 98.7 3.5E-09 1.2E-13 87.5 2.7 78 110-187 90-177 (258)
283 1qyr_A KSGA, high level kasuga 98.7 1.3E-08 4.5E-13 83.9 4.9 74 107-185 20-101 (252)
284 3s1s_A Restriction endonucleas 98.6 2.4E-07 8.1E-12 86.8 11.9 137 108-249 321-496 (878)
285 2wk1_A NOVP; transferase, O-me 98.5 3E-07 1E-11 76.7 8.2 125 107-243 105-266 (282)
286 3c6k_A Spermine synthase; sper 98.5 2.6E-07 8.8E-12 79.8 7.9 131 108-246 205-356 (381)
287 3evf_A RNA-directed RNA polyme 98.5 1.5E-06 5.3E-11 71.3 11.2 121 93-216 58-187 (277)
288 1wg8_A Predicted S-adenosylmet 98.4 1.6E-06 5.4E-11 71.7 10.0 82 93-181 9-96 (285)
289 4fzv_A Putative methyltransfer 98.4 2.2E-06 7.4E-11 74.0 10.7 126 106-238 146-302 (359)
290 4auk_A Ribosomal RNA large sub 98.4 3.6E-06 1.2E-10 72.3 11.6 125 106-243 209-334 (375)
291 3ufb_A Type I restriction-modi 98.2 6.2E-06 2.1E-10 75.1 10.8 121 93-214 201-363 (530)
292 3gcz_A Polyprotein; flavivirus 98.2 7.5E-07 2.6E-11 73.3 3.9 120 93-216 74-204 (282)
293 2zig_A TTHA0409, putative modi 98.1 4.3E-06 1.5E-10 70.6 7.3 61 93-153 220-280 (297)
294 3vyw_A MNMC2; tRNA wobble urid 98.1 2.4E-05 8.2E-10 65.7 10.8 126 109-248 97-247 (308)
295 3eld_A Methyltransferase; flav 98.0 2.2E-05 7.5E-10 65.1 8.5 118 95-215 67-193 (300)
296 3lkz_A Non-structural protein 98.0 7E-05 2.4E-09 61.8 10.8 119 94-216 79-207 (321)
297 3p8z_A Mtase, non-structural p 98.0 2.7E-05 9.1E-10 62.3 7.9 119 95-217 64-190 (267)
298 2px2_A Genome polyprotein [con 97.9 0.00019 6.5E-09 58.2 12.6 111 98-215 62-185 (269)
299 1rjd_A PPM1P, carboxy methyl t 97.9 0.00026 8.8E-09 60.5 13.7 141 98-242 89-281 (334)
300 1g60_A Adenine-specific methyl 97.8 3.6E-05 1.2E-09 63.6 7.0 63 92-154 196-258 (260)
301 2uyo_A Hypothetical protein ML 97.8 0.0013 4.4E-08 55.6 16.1 135 110-245 104-275 (310)
302 2oo3_A Protein involved in cat 97.7 7.4E-05 2.5E-09 61.8 6.3 124 108-244 91-221 (283)
303 1g55_A DNA cytosine methyltran 97.6 0.00012 4.2E-09 62.9 7.4 129 110-251 3-151 (343)
304 3g7u_A Cytosine-specific methy 97.6 0.00066 2.2E-08 59.0 11.5 123 110-243 3-145 (376)
305 3tka_A Ribosomal RNA small sub 97.5 0.00069 2.4E-08 57.4 10.0 71 106-181 55-135 (347)
306 3r24_A NSP16, 2'-O-methyl tran 97.4 0.0018 6.2E-08 53.5 11.1 126 98-248 96-240 (344)
307 2vz8_A Fatty acid synthase; tr 97.4 5.6E-05 1.9E-09 80.1 2.5 135 107-247 1239-1393(2512)
308 2c7p_A Modification methylase 97.3 0.002 6.9E-08 54.8 10.6 132 109-253 11-157 (327)
309 1i4w_A Mitochondrial replicati 97.3 0.00048 1.6E-08 59.2 6.5 57 109-169 59-117 (353)
310 3qv2_A 5-cytosine DNA methyltr 97.1 0.0013 4.5E-08 56.0 8.2 133 109-253 10-164 (327)
311 3tos_A CALS11; methyltransfera 97.1 0.005 1.7E-07 50.4 11.0 138 101-248 62-246 (257)
312 3iei_A Leucine carboxyl methyl 97.0 0.027 9.2E-07 47.9 15.0 140 109-250 91-282 (334)
313 1boo_A Protein (N-4 cytosine-s 97.0 0.0014 4.8E-08 55.8 7.0 64 91-154 235-298 (323)
314 3pvc_A TRNA 5-methylaminomethy 96.9 0.00077 2.6E-08 63.4 4.9 125 109-247 59-231 (689)
315 3ubt_Y Modification methylase 96.8 0.0095 3.2E-07 50.6 10.7 133 110-253 1-147 (331)
316 3ps9_A TRNA 5-methylaminomethy 96.8 0.0039 1.3E-07 58.4 8.5 124 110-247 68-239 (676)
317 1eg2_A Modification methylase 96.7 0.0021 7.3E-08 54.5 5.9 63 92-154 226-291 (319)
318 4h0n_A DNMT2; SAH binding, tra 96.7 0.0014 4.9E-08 55.9 4.8 131 110-253 4-153 (333)
319 3fwz_A Inner membrane protein 96.5 0.033 1.1E-06 40.8 10.7 109 110-245 8-123 (140)
320 2zig_A TTHA0409, putative modi 96.2 0.012 4.3E-07 49.2 7.7 93 157-249 20-136 (297)
321 3me5_A Cytosine-specific methy 96.2 0.026 8.9E-07 50.5 9.7 128 110-244 89-255 (482)
322 2qrv_A DNA (cytosine-5)-methyl 95.9 0.018 6.1E-07 48.2 7.0 73 108-186 15-95 (295)
323 3llv_A Exopolyphosphatase-rela 95.9 0.16 5.3E-06 37.0 11.5 106 109-244 6-120 (141)
324 2py6_A Methyltransferase FKBM; 95.8 0.015 5.2E-07 51.0 6.4 60 107-166 225-291 (409)
325 3two_A Mannitol dehydrogenase; 95.7 0.05 1.7E-06 46.4 9.0 91 106-214 174-266 (348)
326 1boo_A Protein (N-4 cytosine-s 95.7 0.018 6E-07 48.9 6.0 91 157-249 13-120 (323)
327 1f8f_A Benzyl alcohol dehydrog 95.6 0.0062 2.1E-07 52.6 2.9 93 107-214 189-290 (371)
328 3fpc_A NADP-dependent alcohol 95.4 0.0087 3E-07 51.3 3.2 94 106-214 164-267 (352)
329 1pl8_A Human sorbitol dehydrog 95.3 0.057 2E-06 46.2 8.2 93 106-214 169-274 (356)
330 3m6i_A L-arabinitol 4-dehydrog 95.3 0.071 2.4E-06 45.7 8.8 96 106-214 177-284 (363)
331 1pqw_A Polyketide synthase; ro 95.3 0.014 4.9E-07 45.4 3.9 90 107-214 37-138 (198)
332 3ius_A Uncharacterized conserv 95.2 0.51 1.7E-05 38.5 13.5 128 110-248 6-151 (286)
333 1id1_A Putative potassium chan 95.2 0.42 1.4E-05 35.2 11.8 92 110-213 4-105 (153)
334 1uuf_A YAHK, zinc-type alcohol 95.2 0.031 1E-06 48.3 6.0 92 106-213 192-288 (369)
335 2dph_A Formaldehyde dismutase; 95.2 0.1 3.5E-06 45.4 9.4 101 106-214 183-300 (398)
336 2zwa_A Leucine carboxyl methyl 95.1 0.66 2.3E-05 43.4 15.5 151 97-250 95-310 (695)
337 3uog_A Alcohol dehydrogenase; 95.1 0.0096 3.3E-07 51.3 2.5 93 107-215 188-289 (363)
338 3s2e_A Zinc-containing alcohol 95.1 0.03 1E-06 47.7 5.6 94 106-214 164-264 (340)
339 1lss_A TRK system potassium up 94.9 0.66 2.3E-05 33.1 12.4 106 110-244 5-119 (140)
340 3ip1_A Alcohol dehydrogenase, 94.9 0.032 1.1E-06 48.8 5.5 98 107-214 212-319 (404)
341 3c85_A Putative glutathione-re 94.8 0.63 2.2E-05 35.3 12.2 110 109-245 39-157 (183)
342 1zkd_A DUF185; NESG, RPR58, st 94.8 0.22 7.5E-06 43.1 10.3 43 110-152 82-133 (387)
343 4ej6_A Putative zinc-binding d 94.7 0.033 1.1E-06 48.0 5.1 97 106-214 180-285 (370)
344 3l9w_A Glutathione-regulated p 94.6 0.36 1.2E-05 42.3 11.4 90 109-213 4-102 (413)
345 1kol_A Formaldehyde dehydrogen 94.6 0.17 5.8E-06 43.9 9.3 101 106-214 183-301 (398)
346 1e3j_A NADP(H)-dependent ketos 94.5 0.11 3.9E-06 44.2 7.8 94 106-214 166-272 (352)
347 3gms_A Putative NADPH:quinone 94.3 0.013 4.3E-07 50.0 1.4 92 107-214 143-244 (340)
348 1g60_A Adenine-specific methyl 94.3 0.066 2.2E-06 43.8 5.6 82 159-251 5-101 (260)
349 2d8a_A PH0655, probable L-thre 94.3 0.03 1E-06 47.8 3.6 92 108-214 167-268 (348)
350 1v3u_A Leukotriene B4 12- hydr 94.2 0.053 1.8E-06 45.9 5.1 90 107-214 144-245 (333)
351 3goh_A Alcohol dehydrogenase, 94.2 0.059 2E-06 45.2 5.3 87 107-213 141-229 (315)
352 4b7c_A Probable oxidoreductase 94.1 0.2 6.8E-06 42.3 8.5 94 106-214 147-249 (336)
353 3swr_A DNA (cytosine-5)-methyl 94.1 0.3 1E-05 47.5 10.5 132 110-251 541-704 (1002)
354 3l4b_C TRKA K+ channel protien 94.1 0.41 1.4E-05 37.6 9.8 89 111-213 2-99 (218)
355 3jyn_A Quinone oxidoreductase; 94.0 0.017 5.8E-07 48.9 1.6 93 107-215 139-241 (325)
356 2h6e_A ADH-4, D-arabinose 1-de 93.9 0.071 2.4E-06 45.4 5.4 95 108-214 170-270 (344)
357 3qwb_A Probable quinone oxidor 93.9 0.02 6.7E-07 48.7 1.8 92 107-214 147-248 (334)
358 2eih_A Alcohol dehydrogenase; 93.7 0.11 3.8E-06 44.1 6.2 90 107-214 165-266 (343)
359 4fn4_A Short chain dehydrogena 93.5 1.6 5.4E-05 35.4 12.5 74 107-182 5-92 (254)
360 3pxx_A Carveol dehydrogenase; 93.5 0.92 3.2E-05 37.0 11.4 105 107-213 8-153 (287)
361 4eye_A Probable oxidoreductase 93.4 0.02 6.9E-07 48.8 1.0 92 107-214 158-258 (342)
362 1eg2_A Modification methylase 93.3 0.29 9.8E-06 41.3 8.0 90 158-250 38-141 (319)
363 2j3h_A NADP-dependent oxidored 93.3 0.4 1.4E-05 40.6 9.0 94 107-214 154-256 (345)
364 3oig_A Enoyl-[acyl-carrier-pro 93.2 1.3 4.5E-05 35.7 11.7 107 107-214 5-148 (266)
365 1piw_A Hypothetical zinc-type 93.2 0.047 1.6E-06 46.8 3.0 95 106-214 177-277 (360)
366 4ft4_B DNA (cytosine-5)-methyl 93.1 0.83 2.8E-05 43.4 11.7 43 109-151 212-261 (784)
367 2c0c_A Zinc binding alcohol de 93.1 0.099 3.4E-06 44.8 4.8 93 106-214 161-262 (362)
368 1vj0_A Alcohol dehydrogenase, 93.0 0.26 8.8E-06 42.5 7.5 93 107-214 194-299 (380)
369 3av4_A DNA (cytosine-5)-methyl 92.9 0.85 2.9E-05 45.7 11.6 130 109-248 851-1012(1330)
370 3iht_A S-adenosyl-L-methionine 92.8 0.83 2.8E-05 34.0 8.6 99 106-212 38-146 (174)
371 2j8z_A Quinone oxidoreductase; 92.7 0.048 1.6E-06 46.7 2.3 92 107-214 161-262 (354)
372 3uko_A Alcohol dehydrogenase c 92.7 0.053 1.8E-06 46.8 2.5 93 107-214 192-296 (378)
373 4g81_D Putative hexonate dehyd 92.6 1.1 3.6E-05 36.5 10.2 76 106-183 6-95 (255)
374 2dq4_A L-threonine 3-dehydroge 92.6 0.023 7.8E-07 48.4 0.2 90 108-214 164-263 (343)
375 2b5w_A Glucose dehydrogenase; 92.6 0.4 1.4E-05 40.9 8.0 87 110-214 174-274 (357)
376 1jvb_A NAD(H)-dependent alcoho 92.6 0.3 1E-05 41.5 7.2 95 106-214 168-272 (347)
377 1cdo_A Alcohol dehydrogenase; 92.5 0.084 2.9E-06 45.5 3.7 93 107-214 191-295 (374)
378 3grk_A Enoyl-(acyl-carrier-pro 92.4 1.8 6.2E-05 35.6 11.7 105 107-214 29-170 (293)
379 3nx4_A Putative oxidoreductase 92.4 0.17 5.9E-06 42.4 5.4 89 111-214 149-242 (324)
380 1p0f_A NADP-dependent alcohol 92.4 0.086 2.9E-06 45.4 3.6 93 107-214 190-294 (373)
381 1rjw_A ADH-HT, alcohol dehydro 92.4 0.11 3.8E-06 44.0 4.2 92 106-214 162-262 (339)
382 3jv7_A ADH-A; dehydrogenase, n 92.4 0.08 2.7E-06 45.0 3.3 94 106-214 169-271 (345)
383 2hcy_A Alcohol dehydrogenase 1 92.4 0.47 1.6E-05 40.2 8.2 92 106-214 167-270 (347)
384 4dup_A Quinone oxidoreductase; 92.4 0.044 1.5E-06 46.9 1.6 91 107-214 166-266 (353)
385 1iz0_A Quinone oxidoreductase; 92.3 0.062 2.1E-06 44.8 2.5 90 106-214 123-219 (302)
386 2fzw_A Alcohol dehydrogenase c 92.3 0.1 3.4E-06 44.9 3.9 93 107-214 189-293 (373)
387 2jhf_A Alcohol dehydrogenase E 92.3 0.38 1.3E-05 41.3 7.6 93 107-214 190-294 (374)
388 1e3i_A Alcohol dehydrogenase, 92.3 0.096 3.3E-06 45.1 3.7 93 107-214 194-298 (376)
389 1yb5_A Quinone oxidoreductase; 92.2 0.049 1.7E-06 46.6 1.8 89 107-213 169-269 (351)
390 4eso_A Putative oxidoreductase 92.2 0.99 3.4E-05 36.4 9.6 102 107-213 6-138 (255)
391 2hwk_A Helicase NSP2; rossman 92.2 0.61 2.1E-05 38.3 7.9 81 159-248 190-280 (320)
392 4dkj_A Cytosine-specific methy 92.1 0.35 1.2E-05 42.2 7.0 43 110-152 11-60 (403)
393 1qor_A Quinone oxidoreductase; 92.1 0.049 1.7E-06 46.0 1.6 90 107-214 139-240 (327)
394 4f3n_A Uncharacterized ACR, CO 92.1 0.32 1.1E-05 42.7 6.7 43 109-151 138-187 (432)
395 4fgs_A Probable dehydrogenase 91.9 4.4 0.00015 33.1 13.3 57 107-168 27-86 (273)
396 1wly_A CAAR, 2-haloacrylate re 91.9 0.07 2.4E-06 45.2 2.3 90 107-214 144-245 (333)
397 3h7a_A Short chain dehydrogena 91.7 3.1 0.00011 33.3 12.1 60 107-168 5-67 (252)
398 2g1u_A Hypothetical protein TM 91.7 0.83 2.8E-05 33.7 8.0 95 107-213 17-118 (155)
399 3v2g_A 3-oxoacyl-[acyl-carrier 91.6 2.5 8.6E-05 34.3 11.5 113 100-214 22-166 (271)
400 4dvj_A Putative zinc-dependent 91.5 0.6 2.1E-05 39.9 7.9 90 108-212 171-269 (363)
401 3ijr_A Oxidoreductase, short c 91.5 2.4 8.4E-05 34.8 11.4 105 107-213 45-182 (291)
402 1yqd_A Sinapyl alcohol dehydro 91.2 0.62 2.1E-05 39.9 7.6 93 108-214 187-283 (366)
403 3fbg_A Putative arginate lyase 91.1 0.1 3.5E-06 44.4 2.5 90 108-212 150-247 (346)
404 3ek2_A Enoyl-(acyl-carrier-pro 91.0 1.4 4.9E-05 35.4 9.4 105 106-213 11-153 (271)
405 3qiv_A Short-chain dehydrogena 91.0 1.4 4.7E-05 35.2 9.2 76 107-184 7-96 (253)
406 4a2c_A Galactitol-1-phosphate 90.9 6.3 0.00022 33.0 15.1 94 106-214 158-261 (346)
407 2zb4_A Prostaglandin reductase 90.8 1.2 3.9E-05 37.9 9.0 92 106-214 156-261 (357)
408 3ioy_A Short-chain dehydrogena 90.7 6 0.00021 32.9 13.2 62 107-168 6-70 (319)
409 2aef_A Calcium-gated potassium 90.6 1.7 5.6E-05 34.4 9.3 90 109-215 9-107 (234)
410 1xa0_A Putative NADPH dependen 90.6 0.25 8.5E-06 41.6 4.5 91 111-214 152-247 (328)
411 1lnq_A MTHK channels, potassiu 90.6 1.9 6.4E-05 36.3 10.0 90 109-215 115-213 (336)
412 3is3_A 17BETA-hydroxysteroid d 90.5 3 0.0001 33.7 10.9 106 107-214 16-153 (270)
413 3e8x_A Putative NAD-dependent 90.4 2.7 9.2E-05 33.0 10.3 133 107-250 19-172 (236)
414 2cf5_A Atccad5, CAD, cinnamyl 90.4 0.46 1.6E-05 40.5 6.0 93 108-214 180-276 (357)
415 4hp8_A 2-deoxy-D-gluconate 3-d 90.2 2.3 8E-05 34.2 9.8 73 107-183 7-88 (247)
416 3gaz_A Alcohol dehydrogenase s 90.2 0.11 3.7E-06 44.2 1.9 88 107-213 149-246 (343)
417 3lyl_A 3-oxoacyl-(acyl-carrier 90.2 2.7 9.1E-05 33.4 10.2 75 108-184 4-92 (247)
418 4eez_A Alcohol dehydrogenase 1 90.1 0.86 2.9E-05 38.5 7.5 97 106-214 161-264 (348)
419 3krt_A Crotonyl COA reductase; 89.9 1.8 6.1E-05 38.2 9.6 94 107-213 227-344 (456)
420 3k31_A Enoyl-(acyl-carrier-pro 89.8 2.5 8.6E-05 34.8 10.0 105 107-214 28-169 (296)
421 3imf_A Short chain dehydrogena 89.8 5.2 0.00018 32.0 11.7 59 108-168 5-66 (257)
422 1xg5_A ARPG836; short chain de 89.7 2.4 8.2E-05 34.4 9.8 76 108-184 31-121 (279)
423 2cdc_A Glucose dehydrogenase g 89.7 0.74 2.5E-05 39.3 6.8 90 109-214 181-279 (366)
424 3rkr_A Short chain oxidoreduct 89.7 1.8 6.2E-05 34.9 8.8 76 107-184 27-116 (262)
425 3ggo_A Prephenate dehydrogenas 89.5 1.9 6.5E-05 36.1 9.0 88 110-211 34-126 (314)
426 1wma_A Carbonyl reductase [NAD 89.4 1.8 6.3E-05 34.7 8.7 102 109-213 4-138 (276)
427 2hmt_A YUAA protein; RCK, KTN, 89.4 3.4 0.00011 29.3 9.4 106 109-243 6-120 (144)
428 3ucx_A Short chain dehydrogena 89.3 7.3 0.00025 31.2 13.3 60 107-168 9-71 (264)
429 3r3s_A Oxidoreductase; structu 89.3 2.9 9.9E-05 34.4 10.0 105 107-213 47-185 (294)
430 3sju_A Keto reductase; short-c 89.3 5.8 0.0002 32.2 11.8 59 108-168 23-84 (279)
431 2ae2_A Protein (tropinone redu 88.7 2.8 9.7E-05 33.6 9.3 76 107-184 7-97 (260)
432 3tfo_A Putative 3-oxoacyl-(acy 88.5 6.7 0.00023 31.6 11.5 58 109-168 4-64 (264)
433 1qsg_A Enoyl-[acyl-carrier-pro 88.4 6.5 0.00022 31.5 11.4 103 108-213 8-148 (265)
434 4e6p_A Probable sorbitol dehyd 88.2 5.6 0.00019 31.8 10.8 73 107-184 6-92 (259)
435 3t4x_A Oxidoreductase, short c 88.1 2.7 9.2E-05 33.9 8.9 78 107-184 8-95 (267)
436 1tt7_A YHFP; alcohol dehydroge 88.1 0.95 3.3E-05 37.9 6.3 94 108-214 149-248 (330)
437 3ged_A Short-chain dehydrogena 88.0 5.4 0.00018 32.1 10.4 67 110-182 3-83 (247)
438 3lf2_A Short chain oxidoreduct 87.8 8.4 0.00029 30.9 11.7 61 107-168 6-70 (265)
439 3r1i_A Short-chain type dehydr 87.6 5.4 0.00019 32.4 10.5 61 106-168 29-92 (276)
440 3r6d_A NAD-dependent epimerase 87.5 2.6 9E-05 32.7 8.3 127 111-248 7-154 (221)
441 2f1k_A Prephenate dehydrogenas 87.5 4.2 0.00014 32.9 9.7 86 111-211 2-89 (279)
442 3v8b_A Putative dehydrogenase, 87.4 10 0.00036 30.8 13.2 60 107-168 26-88 (283)
443 1g0o_A Trihydroxynaphthalene r 87.4 5.3 0.00018 32.4 10.3 105 107-213 27-163 (283)
444 3pgx_A Carveol dehydrogenase; 87.3 10 0.00035 30.6 12.2 60 107-168 13-88 (280)
445 1hdc_A 3-alpha, 20 beta-hydrox 87.0 3.5 0.00012 33.0 8.9 72 108-184 4-89 (254)
446 4dcm_A Ribosomal RNA large sub 86.9 11 0.00037 32.2 12.4 98 108-213 38-136 (375)
447 4a0s_A Octenoyl-COA reductase/ 86.8 2.8 9.7E-05 36.7 8.8 93 107-213 219-336 (447)
448 3o38_A Short chain dehydrogena 86.7 11 0.00037 30.1 12.5 61 107-168 20-84 (266)
449 3gqv_A Enoyl reductase; medium 86.1 0.46 1.6E-05 40.8 3.2 94 107-213 163-263 (371)
450 3tsc_A Putative oxidoreductase 85.9 12 0.00042 30.1 12.2 60 107-168 9-84 (277)
451 3abi_A Putative uncharacterize 85.8 2.5 8.5E-05 36.1 7.7 67 107-182 14-85 (365)
452 3oec_A Carveol dehydrogenase ( 85.8 12 0.00041 31.0 11.8 60 107-168 44-118 (317)
453 3tqh_A Quinone oxidoreductase; 85.8 2.6 9E-05 35.1 7.8 91 106-213 150-245 (321)
454 3ew7_A LMO0794 protein; Q8Y8U8 85.7 10 0.00035 29.0 10.9 92 111-212 2-101 (221)
455 3t7c_A Carveol dehydrogenase; 85.7 13 0.00046 30.3 13.4 60 107-168 26-100 (299)
456 2vn8_A Reticulon-4-interacting 85.6 0.66 2.3E-05 39.8 4.0 92 107-213 182-280 (375)
457 4egf_A L-xylulose reductase; s 85.6 4.4 0.00015 32.6 8.8 76 107-184 18-108 (266)
458 1xkq_A Short-chain reductase f 85.5 4.6 0.00016 32.7 9.0 76 108-183 5-95 (280)
459 1cyd_A Carbonyl reductase; sho 85.5 11 0.00037 29.5 11.1 71 107-184 5-86 (244)
460 4imr_A 3-oxoacyl-(acyl-carrier 85.4 5.7 0.00019 32.2 9.5 60 107-168 31-93 (275)
461 3g0o_A 3-hydroxyisobutyrate de 85.3 4.3 0.00015 33.5 8.8 113 110-245 8-125 (303)
462 1zcj_A Peroxisomal bifunctiona 85.3 13 0.00044 32.8 12.3 95 110-211 38-148 (463)
463 3f9i_A 3-oxoacyl-[acyl-carrier 85.3 3.6 0.00012 32.6 8.1 74 106-184 11-94 (249)
464 3tox_A Short chain dehydrogena 85.2 11 0.00037 30.6 11.1 60 107-168 6-68 (280)
465 1geg_A Acetoin reductase; SDR 85.1 6.8 0.00023 31.2 9.7 72 110-183 3-88 (256)
466 4ibo_A Gluconate dehydrogenase 85.1 7.8 0.00027 31.3 10.1 61 106-168 23-86 (271)
467 1xhl_A Short-chain dehydrogena 85.0 3.4 0.00012 34.0 8.0 77 107-183 24-115 (297)
468 3ftp_A 3-oxoacyl-[acyl-carrier 84.9 10 0.00034 30.6 10.7 60 107-168 26-88 (270)
469 3tjr_A Short chain dehydrogena 84.4 3.6 0.00012 33.9 7.9 76 107-184 29-118 (301)
470 2cfc_A 2-(R)-hydroxypropyl-COM 84.2 4.6 0.00016 31.9 8.2 71 110-183 3-89 (250)
471 3pk0_A Short-chain dehydrogena 84.1 15 0.0005 29.4 12.0 61 107-168 8-71 (262)
472 3k96_A Glycerol-3-phosphate de 83.9 7.1 0.00024 33.2 9.7 97 109-213 29-133 (356)
473 4dmm_A 3-oxoacyl-[acyl-carrier 83.8 15 0.00052 29.4 11.5 61 106-168 25-89 (269)
474 1ae1_A Tropinone reductase-I; 83.7 16 0.00053 29.4 12.9 60 107-168 19-81 (273)
475 2ew2_A 2-dehydropantoate 2-red 83.7 15 0.00053 29.9 11.6 98 110-212 4-107 (316)
476 3rih_A Short chain dehydrogena 83.6 13 0.00045 30.4 11.0 61 107-168 39-102 (293)
477 3uve_A Carveol dehydrogenase ( 83.5 16 0.00055 29.5 13.2 60 107-168 9-87 (286)
478 3svt_A Short-chain type dehydr 83.3 16 0.00056 29.4 13.2 62 107-168 9-74 (281)
479 4g65_A TRK system potassium up 83.2 3.8 0.00013 36.3 7.9 90 110-213 4-102 (461)
480 1oaa_A Sepiapterin reductase; 83.1 16 0.00054 29.0 12.5 60 108-167 5-70 (259)
481 2jah_A Clavulanic acid dehydro 82.9 16 0.00053 28.9 12.3 59 108-168 6-67 (247)
482 3ic5_A Putative saccharopine d 82.9 3.9 0.00013 27.8 6.5 64 109-182 5-77 (118)
483 3s55_A Putative short-chain de 82.8 17 0.00058 29.2 12.5 60 107-168 8-82 (281)
484 2pd4_A Enoyl-[acyl-carrier-pro 82.7 14 0.00047 29.7 10.7 103 108-213 5-144 (275)
485 3rd5_A Mypaa.01249.C; ssgcid, 82.6 5.5 0.00019 32.5 8.2 73 107-184 14-96 (291)
486 4e12_A Diketoreductase; oxidor 82.5 5.4 0.00019 32.5 8.2 96 110-211 5-119 (283)
487 2g5c_A Prephenate dehydrogenas 82.5 9 0.00031 31.0 9.5 87 111-211 3-94 (281)
488 3cxt_A Dehydrogenase with diff 82.4 19 0.00064 29.4 12.3 60 107-168 32-94 (291)
489 3gaf_A 7-alpha-hydroxysteroid 82.4 3.6 0.00012 33.0 6.9 76 107-184 10-99 (256)
490 3guy_A Short-chain dehydrogena 82.3 9.3 0.00032 29.7 9.3 69 111-184 3-82 (230)
491 3l77_A Short-chain alcohol deh 82.2 11 0.00036 29.5 9.6 74 109-184 2-90 (235)
492 3nyw_A Putative oxidoreductase 82.1 17 0.00058 28.8 11.5 62 107-168 5-70 (250)
493 2p91_A Enoyl-[acyl-carrier-pro 82.1 14 0.00046 29.9 10.5 75 107-184 19-109 (285)
494 3edm_A Short chain dehydrogena 81.9 18 0.00061 28.8 13.9 60 107-168 6-69 (259)
495 4dqx_A Probable oxidoreductase 81.9 19 0.00064 29.1 12.4 58 106-168 24-84 (277)
496 3i6i_A Putative leucoanthocyan 81.9 4.1 0.00014 34.1 7.4 130 110-248 11-159 (346)
497 3oid_A Enoyl-[acyl-carrier-pro 81.6 18 0.00062 28.7 11.5 58 109-168 4-65 (258)
498 4fc7_A Peroxisomal 2,4-dienoyl 81.0 20 0.00069 28.8 11.2 60 107-168 25-88 (277)
499 3rku_A Oxidoreductase YMR226C; 80.9 8.3 0.00028 31.5 8.8 77 108-184 32-125 (287)
500 2nwq_A Probable short-chain de 80.7 17 0.00057 29.3 10.5 72 110-184 22-107 (272)
No 1
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.96 E-value=3.3e-28 Score=200.55 Aligned_cols=195 Identities=68% Similarity=1.241 Sum_probs=175.1
Q ss_pred ccchhHhhhcCCCCccCCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC
Q 024008 75 SGGWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLP 154 (274)
Q Consensus 75 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~ 154 (274)
..+|++.|.....+|......+.+..++.....++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.|+++....+
T Consensus 33 ~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 112 (235)
T 3lcc_A 33 EGGWEKCWEEEITPWDQGRATPLIVHLVDTSSLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSP 112 (235)
T ss_dssp HHHHHHHHHTTCCTTCCSSCCHHHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSG
T ss_pred HHHHHHHHhcCCCCcccCCCCHHHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccC
Confidence 47899999998888988888889999888776677899999999999999999999999999999999999999987755
Q ss_pred CCcceEEEEcccCCCCCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHH
Q 024008 155 NAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEE 234 (274)
Q Consensus 155 ~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (274)
...+++++.+|+.+..+.++||+|++..++++++++....+++++.++|+|||.+++..+.......++++.++.+++.+
T Consensus 113 ~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (235)
T 3lcc_A 113 KAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEE 192 (235)
T ss_dssp GGGGEEEECCCTTTCCCSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHH
T ss_pred CCcceEEEECchhcCCCCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHH
Confidence 55679999999999777789999999999999987788899999999999999999999888777778888899999999
Q ss_pred HHhcCCCcEEEEeecccccCCccchhHHHHhhhhh
Q 024008 235 VLQPMGFQAISIVDNKLAIGPRKGREKLGRWKRSV 269 (274)
Q Consensus 235 ~~~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (274)
+++.+||+++.+......+.++.+.|.+.+++...
T Consensus 193 ~l~~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~~~ 227 (235)
T 3lcc_A 193 VLVPIGFKAVSVEENPHAIPTRKGKEKLGRWKKIN 227 (235)
T ss_dssp HHGGGTEEEEEEEECTTCCTTTTTSCEEEEEEESC
T ss_pred HHHHcCCeEEEEEecCCccccccCHHHHhhhhhcc
Confidence 99999999999999999999988888877665443
No 2
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.92 E-value=2.9e-24 Score=178.60 Aligned_cols=175 Identities=18% Similarity=0.297 Sum_probs=142.0
Q ss_pred ccchhHhhhcCCCCccCCCccHHHHHHHhcC--CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhc
Q 024008 75 SGGWEKCWEEGLTPWDIGQPAPIIVHLHQSG--ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSS 152 (274)
Q Consensus 75 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~ 152 (274)
..+|++.|..+..+|....+.+.+.+++... ..++.+|||+|||+|..+..|++.|++|+|+|+|+.+++.|+++...
T Consensus 33 ~~~Wd~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~ 112 (252)
T 2gb4_A 33 LEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNL 112 (252)
T ss_dssp HHHHHHHHHHTCCTTCCTTCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCcccCCCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhccc
Confidence 4689999998888898888888887777543 23568999999999999999999999999999999999999877631
Q ss_pred ----------C------CCCcceEEEEcccCCCCCC--CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 153 ----------L------PNAKFVSFLKADFFTWCPT--ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 153 ----------~------~~~~~v~~~~~d~~~~~~~--~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
. ....+++|+++|+.+..+. ++||+|++..++++++++.+..+++++.++|+|||++++..+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 113 SYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp CEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 0 0125799999999985432 799999999999999887888999999999999999865432
Q ss_pred c-CCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 215 P-ISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 215 ~-~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
. ......++++.++.+++.+++.. +|+++......
T Consensus 193 ~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~~~~ 228 (252)
T 2gb4_A 193 SYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLEEVD 228 (252)
T ss_dssp ECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEEEEE
T ss_pred ecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEeccc
Confidence 2 22234467777899999999998 59998887544
No 3
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.91 E-value=4.2e-24 Score=172.18 Aligned_cols=163 Identities=18% Similarity=0.295 Sum_probs=131.1
Q ss_pred CccCCCccHHHHHHHhcCCC-CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC-----------C
Q 024008 88 PWDIGQPAPIIVHLHQSGAL-PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLP-----------N 155 (274)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~-~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~-----------~ 155 (274)
+|+...+.+.+.+++..... ++.+|||+|||+|..+..+++.|.+|+|+|+|+.+++.|+++..... .
T Consensus 1 ~w~~~~~~~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~ 80 (203)
T 1pjz_A 1 GSHQSEVNKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYA 80 (203)
T ss_dssp --CCSSSTHHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEE
T ss_pred CCCcccCCHHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCccccccccccccc
Confidence 48888889999888876543 56899999999999999999989999999999999999998864310 1
Q ss_pred CcceEEEEcccCCCCCC--CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC-CCCCCCCCcccCHHHH
Q 024008 156 AKFVSFLKADFFTWCPT--ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI-SDHVGGPPYKVSVSDY 232 (274)
Q Consensus 156 ~~~v~~~~~d~~~~~~~--~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~-~~~~~~~~~~~~~~~~ 232 (274)
..+++|+++|+.+.... ++||+|++..++++++++....+++++.++|+|||++++..... .....++++.++.+++
T Consensus 81 ~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el 160 (203)
T 1pjz_A 81 APGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWL 160 (203)
T ss_dssp CSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHH
T ss_pred CCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHH
Confidence 24799999999985443 68999999999999988788889999999999999844333222 2223456777899999
Q ss_pred HHHHhcCCCcEEEEeeccc
Q 024008 233 EEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 233 ~~~~~~~Gf~~~~~~~~~~ 251 (274)
.++++. ||+++.+.....
T Consensus 161 ~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 161 HRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp HHTSCS-SEEEEEEEESSC
T ss_pred HHHhcC-CcEEEEeccccc
Confidence 999999 999988877654
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.88 E-value=3.4e-22 Score=166.92 Aligned_cols=152 Identities=18% Similarity=0.173 Sum_probs=122.7
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhC----CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC
Q 024008 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMAS----PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE 173 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~----~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 173 (274)
+..++.....++.+|||+|||+|..+..+++ ++++|+|+|+|+.+++.|++++...+...+++++++|+.+.. .+
T Consensus 60 i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~-~~ 138 (261)
T 4gek_A 60 IGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA-IE 138 (261)
T ss_dssp HHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC-CC
T ss_pred HHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc-cc
Confidence 3344444456778999999999999988876 477999999999999999999988777778999999998754 35
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC----------------CC---------------
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV----------------GG--------------- 222 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~----------------~~--------------- 222 (274)
+||+|+++.++++++++++..++++++++|+|||++++.+....... .+
T Consensus 139 ~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~ 218 (261)
T 4gek_A 139 NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLEN 218 (261)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHH
T ss_pred ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcc
Confidence 69999999999999988888999999999999999999775443210 00
Q ss_pred CCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 223 PPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 223 ~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
.....+.+++.++|+++||..+++....
T Consensus 219 ~~~~~s~~~~~~~L~~AGF~~ve~~fq~ 246 (261)
T 4gek_A 219 VMLTDSVETHKARLHKAGFEHSELWFQC 246 (261)
T ss_dssp HCCCBCHHHHHHHHHHHTCSEEEEEEEE
T ss_pred cccCCCHHHHHHHHHHcCCCeEEEEEEe
Confidence 0123578899999999999988876543
No 5
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.88 E-value=7.2e-22 Score=158.63 Aligned_cols=187 Identities=15% Similarity=0.239 Sum_probs=144.2
Q ss_pred chhHhhhcCCCCccCCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCC
Q 024008 77 GWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNA 156 (274)
Q Consensus 77 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~ 156 (274)
+|++.|......|. ..+.+.+..++.... ++ +|||+|||+|..+..+++.+.+++++|+++.+++.|+++....+.
T Consensus 1 ~W~~~y~~~~~~~~-~~~~~~l~~~~~~~~-~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~- 76 (202)
T 2kw5_A 1 MWDERFSQSEYVYG-TEPNDFLVSVANQIP-QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV- 76 (202)
T ss_dssp CCCCCCCCCCCCCC-CCCCSSHHHHHHHSC-SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC-
T ss_pred Chhhhhcccchhhc-cCchHHHHHHHHhCC-CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC-
Confidence 57777776555454 345556666666533 34 999999999999999999889999999999999999999876543
Q ss_pred cceEEEEcccCCC-CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC---CCC---CcccCH
Q 024008 157 KFVSFLKADFFTW-CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV---GGP---PYKVSV 229 (274)
Q Consensus 157 ~~v~~~~~d~~~~-~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~---~~~---~~~~~~ 229 (274)
++.++.+|+.+. .++++||+|++. +.+++.+....++.++.++|+|||.+++..+...... ..+ .+.++.
T Consensus 77 -~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (202)
T 2kw5_A 77 -KITTVQSNLADFDIVADAWEGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKL 153 (202)
T ss_dssp -CEEEECCBTTTBSCCTTTCSEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCH
T ss_pred -ceEEEEcChhhcCCCcCCccEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCH
Confidence 699999999874 456789999985 4455667788999999999999999999887654331 111 345799
Q ss_pred HHHHHHHhcCCCcEEEEeecccccCCccchhHHHHhhhhhccc
Q 024008 230 SDYEEVLQPMGFQAISIVDNKLAIGPRKGREKLGRWKRSVRHS 272 (274)
Q Consensus 230 ~~~~~~~~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (274)
+++.++++ ||+++.+.....+.........+..|.+..+++
T Consensus 154 ~~l~~~l~--Gf~v~~~~~~~~~~~~g~~~~~~~~~i~~~~~~ 194 (202)
T 2kw5_A 154 ETLQSELP--SLNWLIANNLERNLDEGAYHQGKAALIQLLGQK 194 (202)
T ss_dssp HHHHHHCS--SSCEEEEEEEEEECSCSSSSCCEEEEEEEEECC
T ss_pred HHHHHHhc--CceEEEEEEEEeecCCCCCcccHHHHHHHHHHh
Confidence 99999999 999999999887754443445666777666554
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.87 E-value=6.9e-21 Score=153.00 Aligned_cols=148 Identities=17% Similarity=0.165 Sum_probs=123.3
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCC
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTE 173 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 173 (274)
...+..++.. .+.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++. .+++++.+|+.+ ..+++
T Consensus 31 ~~~l~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~ 101 (203)
T 3h2b_A 31 RVLIEPWATG---VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPK 101 (203)
T ss_dssp HHHHHHHHHH---CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCC
T ss_pred HHHHHHHhcc---CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCC
Confidence 4455555543 2789999999999999999998999999999999999999884 468999999988 44568
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----CCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----VGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
+||+|++..++++++.++...+++++.++|+|||.+++..+..... .......++.+++.++++++||+++.+..
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp CEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred CeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 9999999999999986677899999999999999999988655431 11122346899999999999999999988
Q ss_pred ccc
Q 024008 249 NKL 251 (274)
Q Consensus 249 ~~~ 251 (274)
...
T Consensus 182 ~~~ 184 (203)
T 3h2b_A 182 DPR 184 (203)
T ss_dssp CTT
T ss_pred cCC
Confidence 665
No 7
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.85 E-value=2.4e-20 Score=157.74 Aligned_cols=153 Identities=17% Similarity=0.185 Sum_probs=125.8
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCCCCe
Q 024008 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPTELF 175 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~f 175 (274)
+..++.....++.+|||+|||+|..+..+++.+.+++|+|+++.+++.|+++....++.++++++.+|+.+. .++++|
T Consensus 58 l~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 137 (285)
T 4htf_A 58 LDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPV 137 (285)
T ss_dssp HHHHHHHTCSSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCE
T ss_pred HHHHHHhcCCCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCc
Confidence 445566555567899999999999999999999999999999999999999998887767899999999884 367899
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCC-----------------------CCCCCCcccCHHHH
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISD-----------------------HVGGPPYKVSVSDY 232 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~-----------------------~~~~~~~~~~~~~~ 232 (274)
|+|++..+++++++ ...+++++.++|+|||++++..+.... ........++.+++
T Consensus 138 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (285)
T 4htf_A 138 DLILFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQV 215 (285)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHH
T ss_pred eEEEECchhhcccC--HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHH
Confidence 99999999999963 367999999999999999997753211 01112345789999
Q ss_pred HHHHhcCCCcEEEEeecccc
Q 024008 233 EEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 233 ~~~~~~~Gf~~~~~~~~~~~ 252 (274)
.++++++||+++.+......
T Consensus 216 ~~~l~~aGf~v~~~~~~~~~ 235 (285)
T 4htf_A 216 YLWLEEAGWQIMGKTGVRVF 235 (285)
T ss_dssp HHHHHHTTCEEEEEEEESSS
T ss_pred HHHHHHCCCceeeeeeEEEe
Confidence 99999999999988876543
No 8
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.85 E-value=1.1e-20 Score=161.00 Aligned_cols=159 Identities=13% Similarity=0.131 Sum_probs=128.0
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCC--cceEEEEcccCCCCCC
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNA--KFVSFLKADFFTWCPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~ 172 (274)
......++.....++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.|+++....+.. .+++++++|+.+...+
T Consensus 69 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 148 (299)
T 3g2m_A 69 TSEAREFATRTGPVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALD 148 (299)
T ss_dssp HHHHHHHHHHHCCCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCS
T ss_pred cHHHHHHHHhhCCCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcC
Confidence 44555566555555679999999999999999999999999999999999999998776421 4699999999986657
Q ss_pred CCeeEEEec-ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-------------------------------
Q 024008 173 ELFDLIFDY-TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV------------------------------- 220 (274)
Q Consensus 173 ~~fD~v~~~-~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~------------------------------- 220 (274)
++||+|++. .++++++++....+++++.++|+|||++++..+......
T Consensus 149 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (299)
T 3g2m_A 149 KRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQ 228 (299)
T ss_dssp CCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEE
T ss_pred CCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEE
Confidence 899998865 678888877788999999999999999999876553110
Q ss_pred ----------CCC-------CcccCHHHHHHHHhcCCCcEEEEeeccccc
Q 024008 221 ----------GGP-------PYKVSVSDYEEVLQPMGFQAISIVDNKLAI 253 (274)
Q Consensus 221 ----------~~~-------~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~~ 253 (274)
.+. ...++.+++.++++++||+++.+.....+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g 278 (299)
T 3g2m_A 229 EITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGG 278 (299)
T ss_dssp EEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTS
T ss_pred EEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCC
Confidence 000 013599999999999999999999876544
No 9
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.84 E-value=2e-20 Score=154.59 Aligned_cols=137 Identities=17% Similarity=0.134 Sum_probs=115.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|..+..+++.+.+++|+|+++.+++.|+++... +++++.+|+.+..++++||+|++..+++|
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 115 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQLPRRYDNIVLTHVLEH 115 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCCSSCEEEEEEESCGGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCcCCcccEEEEhhHHHh
Confidence 3567999999999999999999888999999999999999998753 59999999988767789999999999999
Q ss_pred cChhHHHHHHHHHH-hcccCCcEEEEEEccCCCC----------------------CCCCCcccCHHHHHHHHhcCCCcE
Q 024008 187 IEPEMRAAWAQKIK-DFLKPDGELITLMFPISDH----------------------VGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 187 ~~~~~~~~~l~~l~-~~L~~gG~l~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~Gf~~ 243 (274)
+++ ...+++++. ++|+|||++++........ ..+....++.+++.++++++||++
T Consensus 116 ~~~--~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 116 IDD--PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp CSS--HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred hcC--HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeE
Confidence 964 368999999 9999999999987554311 011123468999999999999999
Q ss_pred EEEeecc
Q 024008 244 ISIVDNK 250 (274)
Q Consensus 244 ~~~~~~~ 250 (274)
+.+....
T Consensus 194 ~~~~~~~ 200 (250)
T 2p7i_A 194 TYRSGIF 200 (250)
T ss_dssp EEEEEEE
T ss_pred EEEeeeE
Confidence 9987643
No 10
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.84 E-value=4.2e-20 Score=151.67 Aligned_cols=147 Identities=16% Similarity=0.174 Sum_probs=121.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++. +.+++|+|+++.+++.|+++....+ +++++.+|+.+....++||+|++..++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFEEKYDMVVSALSI 119 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCCSCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCCCCceEEEEeCcc
Confidence 45689999999999999999884 8899999999999999999987663 799999999986555899999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------------------------------CCCCCcccCHHHHHH
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------------------------------VGGPPYKVSVSDYEE 234 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~ 234 (274)
++++++....+++++.++|+|||.+++.+...... ..+....++.+++.+
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLN 199 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHH
Confidence 99987777789999999999999999987543221 011233468899999
Q ss_pred HHhcCCCcEEEEeecccccCCc
Q 024008 235 VLQPMGFQAISIVDNKLAIGPR 256 (274)
Q Consensus 235 ~~~~~Gf~~~~~~~~~~~~~~~ 256 (274)
+++++||+.+++......+..+
T Consensus 200 ll~~aGF~~v~~~~~~~~~~~~ 221 (234)
T 3dtn_A 200 WLKEAGFRDVSCIYKYYQFAVM 221 (234)
T ss_dssp HHHHTTCEEEEEEEEETTEEEE
T ss_pred HHHHcCCCceeeeeeecceeEE
Confidence 9999999999998776655443
No 11
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.84 E-value=2.5e-20 Score=150.65 Aligned_cols=150 Identities=14% Similarity=0.076 Sum_probs=124.6
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCC
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTEL 174 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 174 (274)
...+..++... .++.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++. ++.+..+|+....++++
T Consensus 31 ~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~ 102 (211)
T 3e23_A 31 SATLTKFLGEL-PAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDA 102 (211)
T ss_dssp CHHHHHHHTTS-CTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSC
T ss_pred hHHHHHHHHhc-CCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCc
Confidence 55666666643 35679999999999999999998999999999999999999987 36788899988667889
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC----CCCCcccCHHHHHHHHhcCC-CcEEEEeec
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV----GGPPYKVSVSDYEEVLQPMG-FQAISIVDN 249 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~G-f~~~~~~~~ 249 (274)
||+|++..++++++.+....+++++.++|+|||++++......... ......++.+++.++++++| |+++.+...
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 103 YDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred EEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 9999999999999877888999999999999999999875443221 11122368999999999999 999999876
Q ss_pred ccc
Q 024008 250 KLA 252 (274)
Q Consensus 250 ~~~ 252 (274)
...
T Consensus 183 ~~~ 185 (211)
T 3e23_A 183 EGK 185 (211)
T ss_dssp EEE
T ss_pred cCC
Confidence 543
No 12
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.84 E-value=1.7e-20 Score=153.78 Aligned_cols=148 Identities=21% Similarity=0.232 Sum_probs=121.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCC----CcceEEEEcccCC-CCCCCCeeEEEec
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPN----AKFVSFLKADFFT-WCPTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~-~~~~~~fD~v~~~ 181 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....+. ..+++++.+|+.. ..+.++||+|++.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 3568999999999999999999899999999999999999999887654 2368999999987 4456889999999
Q ss_pred ccccccC-hhHHHHHHHHHHhcccCCcEEEEEEccCCCCC--------------------------CC----CCcccCHH
Q 024008 182 TFFCAIE-PEMRAAWAQKIKDFLKPDGELITLMFPISDHV--------------------------GG----PPYKVSVS 230 (274)
Q Consensus 182 ~~~~~~~-~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~--------------------------~~----~~~~~~~~ 230 (274)
.++++++ +.....+++++.++|+|||.+++..+...... .+ ....++.+
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEK 188 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHH
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHH
Confidence 9999985 35566899999999999999999876542110 00 01346899
Q ss_pred HHHHHHhcCCCcEEEEeecccccC
Q 024008 231 DYEEVLQPMGFQAISIVDNKLAIG 254 (274)
Q Consensus 231 ~~~~~~~~~Gf~~~~~~~~~~~~~ 254 (274)
++.++++++||+++.+........
T Consensus 189 ~l~~ll~~aGf~~~~~~~~~~~~~ 212 (235)
T 3sm3_A 189 ELVFLLTDCRFEIDYFRVKELETR 212 (235)
T ss_dssp HHHHHHHTTTEEEEEEEEEEEECT
T ss_pred HHHHHHHHcCCEEEEEEecceeec
Confidence 999999999999999988655444
No 13
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.84 E-value=6.8e-20 Score=154.55 Aligned_cols=162 Identities=20% Similarity=0.250 Sum_probs=126.9
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCee
Q 024008 97 IIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFD 176 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 176 (274)
.+.+.+. ..++.+|||+|||+|..+..+++++.+|+|+|+++.+++.++++. .+++++.+|+.....+++||
T Consensus 48 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 48 DLLQLLN--PQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp HHHHHHC--CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHhC--CCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcC
Confidence 3444443 345689999999999999999998899999999999999999886 46889999998855568999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------------------CCCCCcccCHHHHHHHH
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------------------VGGPPYKVSVSDYEEVL 236 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~ 236 (274)
+|++..++++++ +...++.++.++|+|||++++........ ...+....+.+++.+++
T Consensus 120 ~v~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (279)
T 3ccf_A 120 AVFSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNIL 197 (279)
T ss_dssp EEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHH
T ss_pred EEEEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHH
Confidence 999999999985 34678999999999999999877654321 01112345899999999
Q ss_pred hcCCCcEEEEeecccccCCccchhHHHHhhhh
Q 024008 237 QPMGFQAISIVDNKLAIGPRKGREKLGRWKRS 268 (274)
Q Consensus 237 ~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (274)
+++||+++.+.....+.....+.+.+..|.+.
T Consensus 198 ~~aGf~~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (279)
T 3ccf_A 198 EKQGFDVTYAALFNRPTTLAEGEFGMANWIQM 229 (279)
T ss_dssp HHHTEEEEEEEEEECCEECSSGGGHHHHHHHH
T ss_pred HHcCCEEEEEEEecccccccCCHHHHHHHHHH
Confidence 99999999888766655443245566666654
No 14
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.84 E-value=1.6e-19 Score=153.56 Aligned_cols=143 Identities=17% Similarity=0.176 Sum_probs=119.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++. +.+++|+|+++.+++.|+++....+..++++++.+|+.+ +.++++||+|++..++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 45679999999999999999885 789999999999999999998877776789999999988 4456899999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC-----------CCCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG-----------GPPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~ 251 (274)
+|+++ ...++.++.++|+|||++++.+........ ..+...+..++.++++++||+++.+.....
T Consensus 161 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 236 (297)
T 2o57_A 161 LHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSRPD 236 (297)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEECHH
T ss_pred hhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEECch
Confidence 99964 578999999999999999998754432111 112234889999999999999999887543
No 15
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.84 E-value=1.5e-19 Score=144.43 Aligned_cols=164 Identities=13% Similarity=0.201 Sum_probs=128.9
Q ss_pred cccchhHhhhcCCCCccCCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC
Q 024008 74 SSGGWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSL 153 (274)
Q Consensus 74 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~ 153 (274)
...+|...|... .....+..++. ..++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....
T Consensus 7 ~~~~~~~~~~~~-------~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~ 77 (199)
T 2xvm_A 7 DENYFTDKYELT-------RTHSEVLEAVK--VVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIE 77 (199)
T ss_dssp CTTHHHHHHTCC-------CCCHHHHHHTT--TSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred chHHHhhhhccc-------cccHHHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhC
Confidence 346677777542 22444555554 345679999999999999999988899999999999999999988766
Q ss_pred CCCcceEEEEcccCCCCCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-CC--CCCcccCHH
Q 024008 154 PNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-VG--GPPYKVSVS 230 (274)
Q Consensus 154 ~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~-~~--~~~~~~~~~ 230 (274)
+. .+++++.+|+.+....++||+|++..++++++++....+++++.++|+|||.+++........ .. ...+.++.+
T Consensus 78 ~~-~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~ 156 (199)
T 2xvm_A 78 NL-DNLHTRVVDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEG 156 (199)
T ss_dssp TC-TTEEEEECCGGGCCCCCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTT
T ss_pred CC-CCcEEEEcchhhCCCCCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHH
Confidence 54 359999999987444788999999999999987778899999999999999987765433222 11 123456899
Q ss_pred HHHHHHhcCCCcEEEEeec
Q 024008 231 DYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 231 ~~~~~~~~~Gf~~~~~~~~ 249 (274)
++.++++. |+++...+.
T Consensus 157 ~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 157 ELRRYYEG--WERVKYNED 173 (199)
T ss_dssp HHHHHTTT--SEEEEEECC
T ss_pred HHHHHhcC--CeEEEeccc
Confidence 99999987 999988765
No 16
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.83 E-value=1.6e-19 Score=153.98 Aligned_cols=153 Identities=15% Similarity=0.136 Sum_probs=125.5
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024008 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~f 175 (274)
+..++.... .++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|+++....++.++++++.+|+.+. +++|
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~f 138 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPV 138 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCC
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCc
Confidence 344555543 35579999999999999999985 7999999999999999999998888777899999999876 6899
Q ss_pred eEEEeccccccc-------ChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----C-------------------CCC
Q 024008 176 DLIFDYTFFCAI-------EPEMRAAWAQKIKDFLKPDGELITLMFPISDHV-----G-------------------GPP 224 (274)
Q Consensus 176 D~v~~~~~~~~~-------~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~-----~-------------------~~~ 224 (274)
|+|++..+++++ ..+....+++++.++|+|||++++..+...... . ...
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 218 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGG 218 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTC
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCC
Confidence 999999999999 335678999999999999999999876543221 0 011
Q ss_pred cccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 225 YKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 225 ~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
...+.+++.++++++||+++.+......
T Consensus 219 ~~~s~~~~~~~l~~aGf~~~~~~~~~~~ 246 (302)
T 3hem_A 219 RLPRISQVDYYSSNAGWKVERYHRIGAN 246 (302)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEEECGGG
T ss_pred CCCCHHHHHHHHHhCCcEEEEEEeCchh
Confidence 3357899999999999999999875543
No 17
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.83 E-value=1.5e-19 Score=150.83 Aligned_cols=155 Identities=21% Similarity=0.257 Sum_probs=126.6
Q ss_pred cHHHHHHHhcCCC-CCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCC
Q 024008 95 APIIVHLHQSGAL-PKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCP 171 (274)
Q Consensus 95 ~~~~~~~~~~~~~-~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 171 (274)
......++..... ++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|+++.... ++++++.+|+.+ ..+
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~ 117 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFP 117 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCC
Confidence 4445566665543 4579999999999999999885 889999999999999999988665 579999999988 445
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC-----------CCcccCHHHHHHHHhcCC
Q 024008 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG-----------PPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 172 ~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~G 240 (274)
+++||+|++..+++|+++++...+++++.++|+|||.+++..+........ ....++.+++.++++++|
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 197 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACN 197 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTT
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcC
Confidence 789999999999999987888999999999999999999987654431000 112358999999999999
Q ss_pred CcEEEEeecccc
Q 024008 241 FQAISIVDNKLA 252 (274)
Q Consensus 241 f~~~~~~~~~~~ 252 (274)
|+++.+......
T Consensus 198 f~~~~~~~~~~~ 209 (266)
T 3ujc_A 198 FKNVVSKDLSDY 209 (266)
T ss_dssp CEEEEEEECHHH
T ss_pred CeEEEEEeCCHH
Confidence 999998875543
No 18
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.83 E-value=1.6e-19 Score=146.36 Aligned_cols=149 Identities=19% Similarity=0.258 Sum_probs=118.4
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024008 96 PIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~f 175 (274)
..+...+.. ..++.+|||+|||+|..+..+++.+.+++|+|+++.+++.+++ .+. .+++++.+|+.+..+.++|
T Consensus 35 ~~~~~~l~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~~~~~ 108 (218)
T 3ou2_A 35 PAALERLRA-GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTPDRQW 108 (218)
T ss_dssp HHHHHHHTT-TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCCSSCE
T ss_pred HHHHHHHhc-CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCCCCce
Confidence 334444442 2345799999999999999999888899999999999999988 111 4699999999988777899
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC------------------CCC-----CcccCHHHH
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV------------------GGP-----PYKVSVSDY 232 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~------------------~~~-----~~~~~~~~~ 232 (274)
|+|++..++++++++....+++++.++|+|||.+++..+...... .+. ...++.+++
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAEL 188 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHH
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHH
Confidence 999999999999877778999999999999999999876553210 011 113589999
Q ss_pred HHHHhcCCCcEEEEeecc
Q 024008 233 EEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 233 ~~~~~~~Gf~~~~~~~~~ 250 (274)
.++++++||++.......
T Consensus 189 ~~~l~~aGf~v~~~~~~~ 206 (218)
T 3ou2_A 189 TERLTALGWSCSVDEVHP 206 (218)
T ss_dssp HHHHHHTTEEEEEEEEET
T ss_pred HHHHHHCCCEEEeeeccc
Confidence 999999999966655543
No 19
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.83 E-value=1.4e-19 Score=154.62 Aligned_cols=144 Identities=17% Similarity=0.203 Sum_probs=119.1
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYT 182 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 182 (274)
..++.+|||+|||+|..+..++. ++.+|+|+|+++.+++.|+++....+..++++++.+|+.+...+++||+|+++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 45668999999999999999852 577999999999999999999988887778999999999854448999999999
Q ss_pred cccccC-hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----------------------------CCCcccCHHHHH
Q 024008 183 FFCAIE-PEMRAAWAQKIKDFLKPDGELITLMFPISDHVG----------------------------GPPYKVSVSDYE 233 (274)
Q Consensus 183 ~~~~~~-~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~----------------------------~~~~~~~~~~~~ 233 (274)
++++++ +.....+++++.++|+|||++++.++....... +....++.+++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 999985 445557899999999999999998865432110 011235899999
Q ss_pred HHHhcCCCcEEEEeec
Q 024008 234 EVLQPMGFQAISIVDN 249 (274)
Q Consensus 234 ~~~~~~Gf~~~~~~~~ 249 (274)
++++++||+++.+...
T Consensus 276 ~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 276 AQLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHHTTCEEEEEECC
T ss_pred HHHHHCCCEEEEEEcc
Confidence 9999999999998863
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.83 E-value=6.4e-20 Score=149.08 Aligned_cols=139 Identities=21% Similarity=0.221 Sum_probs=115.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++.. .+++++.+|+.+....++||+|++..++++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSIDTIVSTYAFHH 118 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCSEEEEESCGGG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeEEEEECcchhc
Confidence 366899999999999999999989999999999999999999875 368999999998444489999999999999
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----------CC---------CCcccCHHHHHHHHhcCCCcEEEE
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV-----------GG---------PPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~-----------~~---------~~~~~~~~~~~~~~~~~Gf~~~~~ 246 (274)
+++.....++.++.++|+|||.+++.+....... .+ ..+..+.+++.++++++||+++..
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 119 LTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 9877666799999999999999999874432110 00 113347899999999999998877
Q ss_pred eecc
Q 024008 247 VDNK 250 (274)
Q Consensus 247 ~~~~ 250 (274)
....
T Consensus 199 ~~~~ 202 (220)
T 3hnr_A 199 RLNH 202 (220)
T ss_dssp ECSS
T ss_pred eccc
Confidence 7653
No 21
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.83 E-value=6.1e-20 Score=149.13 Aligned_cols=141 Identities=19% Similarity=0.207 Sum_probs=118.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~ 182 (274)
.++.+|||+|||+|..+..+++. ..+++++|+++.+++.++++....+.. +++++.+|+.. ..+.++||+|++..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCCCeeEEEeeh
Confidence 45679999999999999999874 479999999999999999998776653 69999999987 44567899999999
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCC--cccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPP--YKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
++++++ +...+++++.++|+|||.+++.++.......+.. ..++.+++.++++++||+++.+....
T Consensus 115 ~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 182 (219)
T 3dh0_A 115 TFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVG 182 (219)
T ss_dssp CGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEET
T ss_pred hhhhcC--CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeC
Confidence 999985 3468899999999999999998877655433332 34689999999999999998887643
No 22
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.83 E-value=1.8e-19 Score=154.48 Aligned_cols=141 Identities=16% Similarity=0.132 Sum_probs=119.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|+++....++.++++++.+|+.+ ..++++||+|++..++
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 34579999999999999999886 889999999999999999999988877789999999988 4456899999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC------------CCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG------------PPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
++++ ...+++++.++|+|||++++........... .+...+.+++.++++++||+++.+....
T Consensus 196 ~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 196 MYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp GGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred hhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 9994 6789999999999999999887655432211 0123578999999999999999998854
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.83 E-value=1.1e-19 Score=147.75 Aligned_cols=160 Identities=9% Similarity=0.146 Sum_probs=120.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCc----ceEEEEcccCC-CCCCCCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAK----FVSFLKADFFT-WCPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~iD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~-~~~~~~fD~v~ 179 (274)
.++.+|||+|||+|..+..+++.+ .+++|+|+++.+++.|+++....++.+ +++++.+|+.. ..+.++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 456899999999999999999855 699999999999999999987665543 79999999966 33457899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----------CCCCcccCHHHHH----HHHhcCCCcEE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV-----------GGPPYKVSVSDYE----EVLQPMGFQAI 244 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~-----------~~~~~~~~~~~~~----~~~~~~Gf~~~ 244 (274)
+..++++++++....+++++.++|+|||.+++......... ....+.++.+++. ++++.+||++.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~ 187 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVR 187 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEE
Confidence 99999999877778999999999999997776654332110 1122346888998 88999999775
Q ss_pred EEeecccccCCccchhHHHHhhh
Q 024008 245 SIVDNKLAIGPRKGREKLGRWKR 267 (274)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~ 267 (274)
.... ...........++++|.+
T Consensus 188 ~~~~-g~~~~~~g~~~qi~~~~~ 209 (219)
T 3jwg_A 188 FLQI-GEIDDEFGSPTQMGVFTL 209 (219)
T ss_dssp EEEE-SCCCTTSCCSEEEEEEEE
T ss_pred EEec-CCccccCCCCeEEEEEec
Confidence 5432 222223333445555544
No 24
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.83 E-value=1.7e-19 Score=150.02 Aligned_cols=152 Identities=16% Similarity=0.131 Sum_probs=121.5
Q ss_pred cHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC
Q 024008 95 APIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 172 (274)
...+..++.... .++.+|||+|||+|..+..+++ .+.+++|+|+++.+++.|+++....++.++++++.+|+.+..++
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 101 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN 101 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcC
Confidence 444555555543 4557999999999999999987 47899999999999999999998887777899999999885557
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----------CCCCcccCHHHHHHHHhcCCC
Q 024008 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV-----------GGPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~Gf 241 (274)
++||+|++..++++++ +...+++++.++|+|||.+++.+....... .......+..++.++++++||
T Consensus 102 ~~fD~V~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 179 (256)
T 1nkv_A 102 EKCDVAACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGY 179 (256)
T ss_dssp SCEEEEEEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTB
T ss_pred CCCCEEEECCChHhcC--CHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCC
Confidence 8899999999999885 346789999999999999998764321110 011134588999999999999
Q ss_pred cEEEEee
Q 024008 242 QAISIVD 248 (274)
Q Consensus 242 ~~~~~~~ 248 (274)
+++.+..
T Consensus 180 ~~~~~~~ 186 (256)
T 1nkv_A 180 DVVEMVL 186 (256)
T ss_dssp CCCEEEE
T ss_pred eeEEEEe
Confidence 9887654
No 25
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.83 E-value=2.2e-19 Score=149.80 Aligned_cols=143 Identities=16% Similarity=0.132 Sum_probs=117.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+.+++|+|+++.+++.|+++....+. .+++++.+|+.. ..++++||+|+++.+++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEecHHhCCCCCCCEEEEEEhhhhH
Confidence 4568999999999999999999878999999999999999999877665 369999999988 45568999999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------------CCCCCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------------VGGPPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~ 251 (274)
++++ ...++.++.++|+|||++++.+...... .......++.+++.++++++||+++.+.....
T Consensus 115 ~~~d--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 192 (260)
T 1vl5_A 115 HFPN--PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCFHK 192 (260)
T ss_dssp GCSC--HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEEEE
T ss_pred hcCC--HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEeec
Confidence 9963 4688999999999999999876443221 01112335889999999999999988887654
Q ss_pred c
Q 024008 252 A 252 (274)
Q Consensus 252 ~ 252 (274)
.
T Consensus 193 ~ 193 (260)
T 1vl5_A 193 T 193 (260)
T ss_dssp E
T ss_pred c
Confidence 3
No 26
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.83 E-value=8.9e-20 Score=150.34 Aligned_cols=141 Identities=21% Similarity=0.288 Sum_probs=116.2
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~ 184 (274)
..++.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++... .+++++.+|+.+ ..++++||+|++..++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEG----PDLSFIKGDLSSLPFENEQFEAIMAINSL 126 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCB----TTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhccc----CCceEEEcchhcCCCCCCCccEEEEcChH
Confidence 34678999999999999999999999999999999999999988522 569999999988 4457899999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC-----------CCCcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG-----------GPPYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
+|++ +...++.++.++|+|||++++..++...... .....++..++.++++++||+++........
T Consensus 127 ~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 203 (242)
T 3l8d_A 127 EWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYKR 203 (242)
T ss_dssp TSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEEECT
T ss_pred hhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeeccccc
Confidence 9985 3467899999999999999998865532211 1122368899999999999999998865433
No 27
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.82 E-value=6.1e-19 Score=147.69 Aligned_cols=153 Identities=15% Similarity=0.098 Sum_probs=123.0
Q ss_pred cHHHHHHHhcCC--CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-C
Q 024008 95 APIIVHLHQSGA--LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-C 170 (274)
Q Consensus 95 ~~~~~~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~ 170 (274)
.......+.... .++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|+++....++.++++++.+|+.+. .
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 110 (267)
T 3kkz_A 31 PEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF 110 (267)
T ss_dssp HHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC
T ss_pred HHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC
Confidence 344555555543 45689999999999999999985 4599999999999999999998888878899999999883 4
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----------CCCcccCHHHHHHHHhcCC
Q 024008 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG----------GPPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~G 240 (274)
+.++||+|++..++++++ ...+++++.++|+|||++++.+........ ..+...+..++.++++++|
T Consensus 111 ~~~~fD~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 187 (267)
T 3kkz_A 111 RNEELDLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAG 187 (267)
T ss_dssp CTTCEEEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTT
T ss_pred CCCCEEEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCC
Confidence 568999999999999984 367899999999999999987754221100 0123347899999999999
Q ss_pred CcEEEEeecc
Q 024008 241 FQAISIVDNK 250 (274)
Q Consensus 241 f~~~~~~~~~ 250 (274)
|+++.+....
T Consensus 188 f~~v~~~~~~ 197 (267)
T 3kkz_A 188 YLPVATFILP 197 (267)
T ss_dssp EEEEEEEECC
T ss_pred CEEEEEEECC
Confidence 9999887754
No 28
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.82 E-value=1.9e-19 Score=152.29 Aligned_cols=152 Identities=20% Similarity=0.166 Sum_probs=122.6
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024008 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~f 175 (274)
+..++.... .++.+|||+|||+|..+..+++ .+.+|+|+|+++.+++.++++....+..++++++.+|+.+.. ++|
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~f 130 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPV 130 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCC
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCe
Confidence 334455443 3457999999999999999984 677999999999999999999988777778999999997643 889
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----C--------------------CCcccCHHH
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG----G--------------------PPYKVSVSD 231 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~----~--------------------~~~~~~~~~ 231 (274)
|+|++..+++|++++....+++++.++|+|||.+++.......... + .....+.++
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 210 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPM 210 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHH
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHH
Confidence 9999999999997667788999999999999999987765432100 0 012248999
Q ss_pred HHHHHhcCCCcEEEEeeccc
Q 024008 232 YEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 232 ~~~~~~~~Gf~~~~~~~~~~ 251 (274)
+.++++++||+++.+.....
T Consensus 211 ~~~~l~~aGf~~~~~~~~~~ 230 (287)
T 1kpg_A 211 VQECASANGFTVTRVQSLQP 230 (287)
T ss_dssp HHHHHHTTTCEEEEEEECHH
T ss_pred HHHHHHhCCcEEEEEEeCcH
Confidence 99999999999999887543
No 29
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.82 E-value=1.8e-19 Score=148.66 Aligned_cols=142 Identities=13% Similarity=0.139 Sum_probs=116.6
Q ss_pred CCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEeccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~~~ 185 (274)
++.+|||+|||+|..+..+++.+ .+++++|+++.+++.|+++....+ ..+++++.+|+... .+.++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 46899999999999999998864 499999999999999999987653 24689999998774 3456899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC----CCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH----VGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
+++++....++.++.++|+|||++++.+...... .....+..+.+++.++++++||+++.+....
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQE 226 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecC
Confidence 9987777899999999999999999977543320 1112233589999999999999999987753
No 30
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.82 E-value=2.4e-19 Score=150.51 Aligned_cols=154 Identities=21% Similarity=0.249 Sum_probs=124.5
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCC
Q 024008 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTEL 174 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 174 (274)
...++.... .++.+|||+|||+|..+..+++ .+.+|+|+|+++.+++.++++....++.++++++.+|+.+ ..++++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 129 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDAS 129 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCC
Confidence 334444443 3567999999999999999987 5789999999999999999999888777789999999988 445679
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC--------------CCCcccCHHHHHHHHhcCC
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG--------------GPPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~G 240 (274)
||+|++..+++++++ ...+++++.++|+|||++++.++....... ......+.+++.++++++|
T Consensus 130 fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 207 (273)
T 3bus_A 130 FDAVWALESLHHMPD--RGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAE 207 (273)
T ss_dssp EEEEEEESCTTTSSC--HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTT
T ss_pred ccEEEEechhhhCCC--HHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcC
Confidence 999999999999853 368899999999999999988765432110 1223468899999999999
Q ss_pred CcEEEEeeccccc
Q 024008 241 FQAISIVDNKLAI 253 (274)
Q Consensus 241 f~~~~~~~~~~~~ 253 (274)
|+++.+.......
T Consensus 208 f~~~~~~~~~~~~ 220 (273)
T 3bus_A 208 LVVTSTVDISAQA 220 (273)
T ss_dssp CEEEEEEECHHHH
T ss_pred CeEEEEEECcHhH
Confidence 9999888865443
No 31
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.82 E-value=2.2e-20 Score=156.32 Aligned_cols=177 Identities=15% Similarity=0.103 Sum_probs=124.6
Q ss_pred cccchhHhhhcCCCCccCC----CccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHH
Q 024008 74 SSGGWEKCWEEGLTPWDIG----QPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEE 148 (274)
Q Consensus 74 ~~~~w~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~ 148 (274)
...+|+.+|.......... -+...+.+++.....++.+|||||||+|..+..++..++ +|+|+|+|+.+++.|++
T Consensus 17 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~ 96 (263)
T 2a14_A 17 PRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEK 96 (263)
T ss_dssp HHHHHHHHCCCCCSCCHHHHHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHH
Confidence 3467888887654321100 011223333332344567999999999988887777776 79999999999999998
Q ss_pred HhhcCCC----------------------------CcceE-EEEcccCCCC-----CCCCeeEEEecccccccC--hhHH
Q 024008 149 LSSSLPN----------------------------AKFVS-FLKADFFTWC-----PTELFDLIFDYTFFCAIE--PEMR 192 (274)
Q Consensus 149 ~~~~~~~----------------------------~~~v~-~~~~d~~~~~-----~~~~fD~v~~~~~~~~~~--~~~~ 192 (274)
++..... ..++. ++.+|+.+.. ..++||+|+++.+++++. .++.
T Consensus 97 ~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~ 176 (263)
T 2a14_A 97 WLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAY 176 (263)
T ss_dssp HHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHH
T ss_pred HHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHH
Confidence 7654320 01243 8899998732 246899999999999863 3567
Q ss_pred HHHHHHHHhcccCCcEEEEEEccCCCC-C-C---CCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 193 AAWAQKIKDFLKPDGELITLMFPISDH-V-G---GPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 193 ~~~l~~l~~~L~~gG~l~~~~~~~~~~-~-~---~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
..++.+++++|||||.+++........ . . ...+.++.+++.++++++||+++.+....
T Consensus 177 ~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 177 RAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 789999999999999999986432211 0 0 01234689999999999999999988754
No 32
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.82 E-value=2.4e-19 Score=149.76 Aligned_cols=145 Identities=15% Similarity=0.157 Sum_probs=115.9
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeE
Q 024008 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDL 177 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~ 177 (274)
+..++.....++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.|+++.. +++++.+|+.+...+++||+
T Consensus 40 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~fD~ 113 (263)
T 3pfg_A 40 LAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSLGRRFSA 113 (263)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCCSCCEEE
T ss_pred HHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCccCCcCE
Confidence 334443333456899999999999999999999999999999999999999863 68999999998655789999
Q ss_pred EEecc-cccccCh-hHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----------------------------------
Q 024008 178 IFDYT-FFCAIEP-EMRAAWAQKIKDFLKPDGELITLMFPISDHV----------------------------------- 220 (274)
Q Consensus 178 v~~~~-~~~~~~~-~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~----------------------------------- 220 (274)
|++.. ++++++. +....+++++.++|+|||.+++..+......
T Consensus 114 v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (263)
T 3pfg_A 114 VTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVH 193 (263)
T ss_dssp EEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEE
Confidence 99998 9999854 5677899999999999999999643222110
Q ss_pred -----CC-C---------CcccCHHHHHHHHhcCCCcEEEEee
Q 024008 221 -----GG-P---------PYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 221 -----~~-~---------~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.+ . ...++.+++.++|+++||+++.+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~ 236 (263)
T 3pfg_A 194 YLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPG 236 (263)
T ss_dssp EEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESS
T ss_pred EEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeC
Confidence 00 0 1225799999999999999988754
No 33
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.82 E-value=3.3e-19 Score=144.76 Aligned_cols=140 Identities=11% Similarity=0.141 Sum_probs=113.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCc----ceEEEEcccCCC-CCCCCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAK----FVSFLKADFFTW-CPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~iD~s~~~~~~a~~~~~~~~~~~----~v~~~~~d~~~~-~~~~~fD~v~ 179 (274)
.++.+|||+|||+|..+..+++.+ .+++|+|+++.+++.|++++...++.. +++++.+|+... .+.++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 456899999999999999998854 699999999999999999988776654 799999998653 3447899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCC------C-----CCCCCCcccCHHHHH----HHHhcCCCcEE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS------D-----HVGGPPYKVSVSDYE----EVLQPMGFQAI 244 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~------~-----~~~~~~~~~~~~~~~----~~~~~~Gf~~~ 244 (274)
+..++++++++....+++++.++|+|||.+++...... . ......+.++.+++. ++++.+||++.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~ 187 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQ 187 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEE
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEE
Confidence 99999999887888999999999999998777654321 0 011223446899998 99999999875
Q ss_pred EE
Q 024008 245 SI 246 (274)
Q Consensus 245 ~~ 246 (274)
..
T Consensus 188 ~~ 189 (217)
T 3jwh_A 188 FQ 189 (217)
T ss_dssp EC
T ss_pred EE
Confidence 54
No 34
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.82 E-value=4.7e-19 Score=146.09 Aligned_cols=144 Identities=15% Similarity=0.170 Sum_probs=118.1
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~ 184 (274)
..++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....+. .+++++.+|+.. ..++++||+|++..++
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEecccccCCCCCCcEEEEEECCch
Confidence 34568999999999999999999888999999999999999999876654 369999999987 4456789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------------CCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------------VGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
++++ +...++.++.++|+|||.+++........ .......++.+++.++++++||.++.+....
T Consensus 98 ~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~ 175 (239)
T 1xxl_A 98 HHFS--DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKWN 175 (239)
T ss_dssp GGCS--CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEeec
Confidence 9985 34688999999999999999976544221 0111234689999999999999999888865
Q ss_pred cc
Q 024008 251 LA 252 (274)
Q Consensus 251 ~~ 252 (274)
..
T Consensus 176 ~~ 177 (239)
T 1xxl_A 176 LP 177 (239)
T ss_dssp EE
T ss_pred Cc
Confidence 43
No 35
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.81 E-value=2.6e-19 Score=148.68 Aligned_cols=142 Identities=19% Similarity=0.272 Sum_probs=114.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++.+. +|+|+|+++.+++.|+++.. ..+++++.+|+.. ..+.++||+|++..++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 118 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAYNVVLSSLAL 118 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCeEEEEEchhh
Confidence 3568999999999999999999877 99999999999999999986 2579999999987 4456899999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC----------CCC-------------------------CCcccCH
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH----------VGG-------------------------PPYKVSV 229 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~----------~~~-------------------------~~~~~~~ 229 (274)
++++ +...+++++.++|+|||.+++...++... ..+ ..+..+.
T Consensus 119 ~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 196 (253)
T 3g5l_A 119 HYIA--SFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTV 196 (253)
T ss_dssp GGCS--CHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCH
T ss_pred hhhh--hHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCH
Confidence 9984 45789999999999999999875432100 000 0112389
Q ss_pred HHHHHHHhcCCCcEEEEeecccccC
Q 024008 230 SDYEEVLQPMGFQAISIVDNKLAIG 254 (274)
Q Consensus 230 ~~~~~~~~~~Gf~~~~~~~~~~~~~ 254 (274)
+++.++++++||+++.+.+......
T Consensus 197 ~~~~~~l~~aGF~~~~~~e~~~~~~ 221 (253)
T 3g5l_A 197 TTYIQTLLKNGFQINSVIEPEPAPE 221 (253)
T ss_dssp HHHHHHHHHTTEEEEEEECCCCCGG
T ss_pred HHHHHHHHHcCCeeeeeecCCCchh
Confidence 9999999999999999988654433
No 36
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.81 E-value=5.6e-19 Score=146.58 Aligned_cols=150 Identities=15% Similarity=0.090 Sum_probs=120.7
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCC
Q 024008 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTEL 174 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 174 (274)
...++.... .++.+|||+|||+|..+..+++.+ .+++++|+++.+++.++++.... .+++++.+|+... .++++
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~ 158 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNT 158 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSC
T ss_pred HHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCC
Confidence 345555443 346899999999999999998864 47999999999999999998654 5799999999873 45678
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----CCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----VGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
||+|++..++++++++....++.++.++|+|||++++........ .....+..+.+++.++++++||+++.+...
T Consensus 159 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred eEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 999999999999987778899999999999999999987532211 112233468999999999999999988765
Q ss_pred c
Q 024008 250 K 250 (274)
Q Consensus 250 ~ 250 (274)
.
T Consensus 239 ~ 239 (254)
T 1xtp_A 239 E 239 (254)
T ss_dssp T
T ss_pred C
Confidence 3
No 37
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.81 E-value=8.3e-19 Score=148.36 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=122.3
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCC
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTEL 174 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 174 (274)
...+.+.+.. .++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.++++....+. +++++.+|+......++
T Consensus 109 ~~~~~~~~~~--~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~ 184 (286)
T 3m70_A 109 HGDVVDAAKI--ISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQEN 184 (286)
T ss_dssp CHHHHHHHHH--SCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSC
T ss_pred HHHHHHHhhc--cCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCC
Confidence 3445555553 3678999999999999999999999999999999999999999988765 79999999988555789
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC---CCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG---GPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
||+|+++.++++++++....+++++.++|+|||.+++.......... ...+.++.+++.+++.. |+++...+.
T Consensus 185 fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~ 260 (286)
T 3m70_A 185 YDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYNEN 260 (286)
T ss_dssp EEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred ccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEEcc
Confidence 99999999999998888889999999999999997775543332211 12455789999999975 999888654
No 38
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.81 E-value=4e-20 Score=149.81 Aligned_cols=150 Identities=16% Similarity=0.104 Sum_probs=119.0
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCee
Q 024008 99 VHLHQSGALPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFD 176 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD 176 (274)
..++.....++.+|||+|||+|..+..+++ .+.+++++|+++.+++.|+++....+..++++++.+|+.+ ..++++||
T Consensus 34 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 113 (219)
T 3dlc_A 34 ENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYAD 113 (219)
T ss_dssp HHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEE
T ss_pred HHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCccccc
Confidence 334444344445999999999999999988 5779999999999999999999888777789999999988 45668999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----------C-C-------CCCcccCHHHHHHHHh
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----------V-G-------GPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~-----------~-~-------~~~~~~~~~~~~~~~~ 237 (274)
+|++..++++++ +...+++++.++|+|||.+++........ . . .....++.+++.++++
T Consensus 114 ~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (219)
T 3dlc_A 114 LIVSRGSVFFWE--DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLD 191 (219)
T ss_dssp EEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHH
T ss_pred EEEECchHhhcc--CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHH
Confidence 999999999984 45679999999999999999876332110 0 0 0011236799999999
Q ss_pred cCCCcEEEEeecc
Q 024008 238 PMGFQAISIVDNK 250 (274)
Q Consensus 238 ~~Gf~~~~~~~~~ 250 (274)
++||+.+++....
T Consensus 192 ~aGf~~v~~~~~~ 204 (219)
T 3dlc_A 192 EIGISSYEIILGD 204 (219)
T ss_dssp HHTCSSEEEEEET
T ss_pred HcCCCeEEEEecC
Confidence 9999998887543
No 39
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.81 E-value=1.8e-19 Score=148.59 Aligned_cols=152 Identities=18% Similarity=0.105 Sum_probs=120.6
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024008 96 PIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~f 175 (274)
..+..++.....++.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++....+. +++++.+|+.+....++|
T Consensus 25 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~f 102 (246)
T 1y8c_A 25 DFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNINRKF 102 (246)
T ss_dssp HHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCSCCE
T ss_pred HHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCccCCc
Confidence 344555554334678999999999999999999889999999999999999999876653 699999999875444889
Q ss_pred eEEEecc-cccccC-hhHHHHHHHHHHhcccCCcEEEEEEccCCCC----------------------------------
Q 024008 176 DLIFDYT-FFCAIE-PEMRAAWAQKIKDFLKPDGELITLMFPISDH---------------------------------- 219 (274)
Q Consensus 176 D~v~~~~-~~~~~~-~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~---------------------------------- 219 (274)
|+|++.. +++|++ ++....+++++.++|+|||.+++...+....
T Consensus 103 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (246)
T 1y8c_A 103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYIS 182 (246)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEE
Confidence 9999998 999984 4677899999999999999999855432100
Q ss_pred ----CCC---------CCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 220 ----VGG---------PPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 220 ----~~~---------~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
..+ ....++.+++.++++++||+++.+...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 183 FFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 000 012358999999999999999988754
No 40
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.81 E-value=6.8e-19 Score=146.38 Aligned_cols=153 Identities=14% Similarity=0.053 Sum_probs=121.3
Q ss_pred HHHHHHHhcC--CCCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCC
Q 024008 96 PIIVHLHQSG--ALPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCP 171 (274)
Q Consensus 96 ~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 171 (274)
.....++... ..++.+|||+|||+|..+..+++.+ .+|+|+|+++.+++.++++....++.++++++.+|+.. ..+
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (257)
T 3f4k_A 32 EATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ 111 (257)
T ss_dssp HHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC
Confidence 4444555544 2345799999999999999998854 49999999999999999999988887789999999987 445
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----------CCCcccCHHHHHHHHhcCCC
Q 024008 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG----------GPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 172 ~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~Gf 241 (274)
+++||+|++..++++++ ...+++++.++|+|||++++.+........ ..+...+.+++.++++++||
T Consensus 112 ~~~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 188 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGY 188 (257)
T ss_dssp TTCEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTE
T ss_pred CCCEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCC
Confidence 68999999999999984 457899999999999999998743211100 01123478999999999999
Q ss_pred cEEEEeeccc
Q 024008 242 QAISIVDNKL 251 (274)
Q Consensus 242 ~~~~~~~~~~ 251 (274)
+++.+.....
T Consensus 189 ~~v~~~~~~~ 198 (257)
T 3f4k_A 189 TPTAHFILPE 198 (257)
T ss_dssp EEEEEEECCG
T ss_pred eEEEEEECCh
Confidence 9999776543
No 41
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.81 E-value=2.5e-19 Score=147.71 Aligned_cols=135 Identities=18% Similarity=0.145 Sum_probs=114.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---CCCCCCeeEEEeccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---WCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~fD~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.++++ ++++.+|+.+ ..++++||+|++..+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~~~ 110 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMISHF 110 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEESC
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEECCc
Confidence 3458999999999999999998888999999999999999865 6788888876 446789999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------CCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------VGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
+++++++....+++++.++|+|||++++........ .......++.+++.++++++||+++.+....
T Consensus 111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 111 VEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 999987778899999999999999999987654321 1122344689999999999999999888755
No 42
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.80 E-value=9e-19 Score=150.39 Aligned_cols=152 Identities=16% Similarity=0.115 Sum_probs=124.1
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024008 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~f 175 (274)
+..++.... .++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|+++....++.++++++.+|+.+.. ++|
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~f 156 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPV 156 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCC
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCc
Confidence 344455443 35579999999999999999885 88999999999999999999988877778999999997653 789
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC------------------------CCCcccCHHH
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG------------------------GPPYKVSVSD 231 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~------------------------~~~~~~~~~~ 231 (274)
|+|++..++++++++....+++++.++|+|||.+++.......... ......+.++
T Consensus 157 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 236 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEM 236 (318)
T ss_dssp SEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHH
T ss_pred CEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHH
Confidence 9999999999997767789999999999999999998765543100 0112348999
Q ss_pred HHHHHhcCCCcEEEEeeccc
Q 024008 232 YEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 232 ~~~~~~~~Gf~~~~~~~~~~ 251 (274)
+.++++++||+++.+.....
T Consensus 237 ~~~~l~~aGf~~~~~~~~~~ 256 (318)
T 2fk8_A 237 MVEHGEKAGFTVPEPLSLRP 256 (318)
T ss_dssp HHHHHHHTTCBCCCCEECHH
T ss_pred HHHHHHhCCCEEEEEEecch
Confidence 99999999999988777543
No 43
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.80 E-value=1.8e-19 Score=146.79 Aligned_cols=135 Identities=19% Similarity=0.232 Sum_probs=108.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEEec
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~~~ 181 (274)
.++.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++ .++.+..+|+... .+..+||+|++.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 123 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLICAN 123 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEEEC
Confidence 4568999999999999999999999999999999999999987 2467888877653 334569999999
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC---------------------CCcccCHHHHHHHHhcCC
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG---------------------PPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~G 240 (274)
.+++ . .+...+++++.++|+|||++++...+....... ..+..+.+++.++++++|
T Consensus 124 ~~l~-~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 200 (227)
T 3e8s_A 124 FALL-H--QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAG 200 (227)
T ss_dssp SCCC-S--SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT
T ss_pred chhh-h--hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcC
Confidence 9998 4 344678999999999999999988755332111 012348999999999999
Q ss_pred CcEEEEeeccc
Q 024008 241 FQAISIVDNKL 251 (274)
Q Consensus 241 f~~~~~~~~~~ 251 (274)
|+++.+.+...
T Consensus 201 f~~~~~~~~~~ 211 (227)
T 3e8s_A 201 LRLVSLQEPQH 211 (227)
T ss_dssp EEEEEEECCCC
T ss_pred CeEEEEecCCC
Confidence 99999887443
No 44
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=7.2e-19 Score=145.33 Aligned_cols=141 Identities=19% Similarity=0.151 Sum_probs=114.5
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC------CCeeEEE
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT------ELFDLIF 179 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~fD~v~ 179 (274)
..++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.++++... .+++++++|+.+.... ..||+|+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTA----ANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCC----TTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcc----cCceEEECcccccccccccccccCccEEE
Confidence 34567999999999999999999777999999999999999998832 3699999999873211 2489999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC----------------------CCCCCcccCHHHHHHHHh
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH----------------------VGGPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~ 237 (274)
+..++++++++....+++++.++|+|||++++.++..... ....+..++.+++.+++
T Consensus 130 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (245)
T 3ggd_A 130 MRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF- 208 (245)
T ss_dssp EESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC-
T ss_pred EcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh-
Confidence 9999999987788899999999999999999888654321 01112346899999999
Q ss_pred cCCCcEEEEeecccc
Q 024008 238 PMGFQAISIVDNKLA 252 (274)
Q Consensus 238 ~~Gf~~~~~~~~~~~ 252 (274)
+||+++........
T Consensus 209 -aGf~~~~~~~~~~~ 222 (245)
T 3ggd_A 209 -PDFEILSQGEGLFQ 222 (245)
T ss_dssp -TTEEEEEEECCBCC
T ss_pred -CCCEEEeccccccc
Confidence 89999987775543
No 45
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.79 E-value=1.7e-18 Score=151.43 Aligned_cols=140 Identities=14% Similarity=0.122 Sum_probs=118.7
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--CCCCeeEEEeccc
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--PTELFDLIFDYTF 183 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~ 183 (274)
...+|||||||+|..+..+++ ++.+++++|+ +.+++.|+++....++.++++++.+|+++.. .+++||+|++..+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 457999999999999999988 7889999999 9999999999988877778999999999852 2378999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-------------------CCCCcccCHHHHHHHHhcCCCcEE
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV-------------------GGPPYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~Gf~~~ 244 (274)
+++++++....++++++++|+|||++++.+....... .+.....+.+++.++++++||+++
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v 337 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVE 337 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEES
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEE
Confidence 9999988888999999999999999999886443321 111223589999999999999988
Q ss_pred EEee
Q 024008 245 SIVD 248 (274)
Q Consensus 245 ~~~~ 248 (274)
.+..
T Consensus 338 ~~~~ 341 (363)
T 3dp7_A 338 EIQD 341 (363)
T ss_dssp CCCC
T ss_pred EEEe
Confidence 7764
No 46
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.79 E-value=7e-19 Score=141.72 Aligned_cols=142 Identities=20% Similarity=0.180 Sum_probs=115.0
Q ss_pred CCCCeEEEEcCCcchh-HHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYD-VVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~-~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|.. ...++..+.+++|+|+++.+++.++++....+ .+++++.+|+.+ ..++++||+|++..++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcChH
Confidence 4568999999999998 44556688899999999999999999876544 468999999987 3456789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----------------CCC---cccCHHHHHHHHhcCCCcEEE
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG----------------GPP---YKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~----------------~~~---~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
+|++.+....+++++.++|+|||.+++..+...+... +.+ ..++.+++.+++...||....
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~ 179 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKE 179 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeee
Confidence 9998778889999999999999999998876543211 111 346899999999999988776
Q ss_pred Eeecc
Q 024008 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
.....
T Consensus 180 ~~~~~ 184 (209)
T 2p8j_A 180 DRVVE 184 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 65444
No 47
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.79 E-value=2.8e-18 Score=148.28 Aligned_cols=143 Identities=17% Similarity=0.180 Sum_probs=119.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++ ++.+++++|++ .+++.|+++....++.++++++.+|+.+...++.||+|++.+++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 4557999999999999999987 47899999999 99999999987776667899999999874434459999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC----------------CCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG----------------PPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
++++++....+++++.++|+|||++++.+......... ....++.+++.++++++||+.+++..
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~ 322 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHS 322 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEE
Confidence 99988888899999999999999999988765432111 12335899999999999999998876
Q ss_pred cc
Q 024008 249 NK 250 (274)
Q Consensus 249 ~~ 250 (274)
..
T Consensus 323 ~~ 324 (335)
T 2r3s_A 323 LP 324 (335)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 48
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.79 E-value=3.7e-18 Score=147.47 Aligned_cols=140 Identities=12% Similarity=0.054 Sum_probs=118.0
Q ss_pred CCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 109 KGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
..+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....++.++++|+.+|++...+. +||+|++.+++++
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~-~~D~v~~~~vlh~ 247 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA-GAGGYVLSAVLHD 247 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-SCSEEEEESCGGG
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC-CCcEEEEehhhcc
Confidence 47999999999999999987 6779999999 999999999998887778899999999865544 8999999999999
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC-----------CCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG-----------PPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
++++....++++++++|+|||++++.+......... .....+.+++.++++++||+++++....
T Consensus 248 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 322 (332)
T 3i53_A 248 WDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPIS 322 (332)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECS
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 998878899999999999999999988654432000 0123589999999999999999887643
No 49
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.79 E-value=7.3e-19 Score=146.71 Aligned_cols=177 Identities=14% Similarity=0.102 Sum_probs=127.6
Q ss_pred ccchhHhhhcCCCCccCCC----ccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHH
Q 024008 75 SGGWEKCWEEGLTPWDIGQ----PAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEEL 149 (274)
Q Consensus 75 ~~~w~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~ 149 (274)
..+|+.+|......+.... +...+..++.....++.+|||+|||+|..+..++..+. +|+|+|+++.+++.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~ 98 (265)
T 2i62_A 19 RDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKW 98 (265)
T ss_dssp HHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcccccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHH
Confidence 3578888865443321100 11122344443234567999999999999999988877 999999999999999998
Q ss_pred hhcCCC----------------------------Ccce-EEEEcccCCCC--CC---CCeeEEEecccccccCh--hHHH
Q 024008 150 SSSLPN----------------------------AKFV-SFLKADFFTWC--PT---ELFDLIFDYTFFCAIEP--EMRA 193 (274)
Q Consensus 150 ~~~~~~----------------------------~~~v-~~~~~d~~~~~--~~---~~fD~v~~~~~~~~~~~--~~~~ 193 (274)
....+. ..++ +++.+|+.+.. ++ ++||+|++..+++++++ +...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~ 178 (265)
T 2i62_A 99 LKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYR 178 (265)
T ss_dssp HTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHH
T ss_pred HhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHH
Confidence 865421 0127 89999998733 34 78999999999996543 4678
Q ss_pred HHHHHHHhcccCCcEEEEEEccCCCC--CCC---CCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024008 194 AWAQKIKDFLKPDGELITLMFPISDH--VGG---PPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 194 ~~l~~l~~~L~~gG~l~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~ 251 (274)
.++.++.++|+|||.+++........ ... ....++.+++.++++++||+++.+.....
T Consensus 179 ~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 241 (265)
T 2i62_A 179 TALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQ 241 (265)
T ss_dssp HHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECC
T ss_pred HHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEecc
Confidence 89999999999999999877432211 000 12345888999999999999999887654
No 50
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=1.7e-18 Score=137.49 Aligned_cols=131 Identities=19% Similarity=0.197 Sum_probs=112.7
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEec-cc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDY-TF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~-~~ 183 (274)
..++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++. .+++++.+|+.. ..+.++||+|++. .+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~~ 117 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGNV 117 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCcH
Confidence 346789999999999999999988899999999999999999987 358999999987 3456789999998 78
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
+++++.+....++..+.++|+|||.+++...... .++.+++.++++++||.++......
T Consensus 118 ~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~--------~~~~~~~~~~l~~~Gf~~~~~~~~~ 176 (195)
T 3cgg_A 118 MGFLAEDGREPALANIHRALGADGRAVIGFGAGR--------GWVFGDFLEVAERVGLELENAFESW 176 (195)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS--------SCCHHHHHHHHHHHTEEEEEEESST
T ss_pred HhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC--------CcCHHHHHHHHHHcCCEEeeeeccc
Confidence 8888877788999999999999999998764332 2478999999999999998886643
No 51
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.78 E-value=1.2e-18 Score=135.95 Aligned_cols=132 Identities=22% Similarity=0.299 Sum_probs=111.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++. +++++..+| ...++++||+|++..++++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------~~v~~~~~d--~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKF------DSVITLSDP--KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHC------TTSEEESSG--GGSCTTCEEEEEEESCSTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhC------CCcEEEeCC--CCCCCCceEEEEEccchhc
Confidence 45679999999999999999997779999999999999999982 579999999 4455678999999999999
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCc--ccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPY--KVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
++ +...+++++.++|+|||.+++..+.......+++. .++.+++.++++ ||+++.+....
T Consensus 88 ~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~ 149 (170)
T 3i9f_A 88 MD--DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPT 149 (170)
T ss_dssp CS--CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSS
T ss_pred cc--CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCC
Confidence 85 44688999999999999999998876654444332 368999999999 99999887754
No 52
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.78 E-value=2.7e-18 Score=145.71 Aligned_cols=147 Identities=18% Similarity=0.185 Sum_probs=118.7
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-C-CCCCeeEEEecc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-C-PTELFDLIFDYT 182 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~fD~v~~~~ 182 (274)
..++.+|||+|||+|..+..+++.+. +++|+|+++.+++.|+++....+...+++++.+|+... . ++++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 35668999999999999998887555 99999999999999999998877666899999999873 3 467899999999
Q ss_pred cccc--cChhHHHHHHHHHHhcccCCcEEEEEEccCCC-------------------------CC-CCC-----------
Q 024008 183 FFCA--IEPEMRAAWAQKIKDFLKPDGELITLMFPISD-------------------------HV-GGP----------- 223 (274)
Q Consensus 183 ~~~~--~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~-------------------------~~-~~~----------- 223 (274)
++++ .+.+....++.++.++|+|||.+++....... .. .+.
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 221 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVN 221 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCS
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhc
Confidence 9987 45567789999999999999999987644210 00 000
Q ss_pred ---CcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 224 ---PYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 224 ---~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
...++.+++.++++++||+++.+......
T Consensus 222 ~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~ 253 (298)
T 1ri5_A 222 NCIEYFVDFTRMVDGFKRLGLSLVERKGFIDF 253 (298)
T ss_dssp SEEEECCCHHHHHHHHHTTTEEEEEEEEHHHH
T ss_pred CCcccccCHHHHHHHHHHcCCEEEEecCHHHH
Confidence 12357899999999999999998775543
No 53
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.78 E-value=7.5e-18 Score=147.62 Aligned_cols=139 Identities=20% Similarity=0.196 Sum_probs=118.4
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
+..+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....++.++++|+.+|++...+. .||+|++.++++
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~-~~D~v~~~~vlh 279 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD-GADVYLIKHVLH 279 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS-SCSEEEEESCGG
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC-CceEEEhhhhhc
Confidence 457999999999999999987 5779999999 999999999998887778899999999865554 899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC-------------CCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG-------------PPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
+++++....+++++.++|+|||++++.+......... .....+.+++.++++++||+++++..
T Consensus 280 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 280 DWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp GSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 9988877789999999999999999988655432110 01225899999999999999999876
No 54
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.78 E-value=3.4e-18 Score=144.55 Aligned_cols=146 Identities=19% Similarity=0.184 Sum_probs=115.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|+++....+ .+++++.+|+.+...+++||+|++..+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP--YDSEFLEGDATEIELNDKYDIAICHAF 98 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS--SEEEEEESCTTTCCCSSCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEcchhhcCcCCCeeEEEECCh
Confidence 35689999999999999999884 5899999999999999999987765 379999999998555679999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEcc-----CCCC------------------------CCCCCcccCHHHHHH
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFP-----ISDH------------------------VGGPPYKVSVSDYEE 234 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~-----~~~~------------------------~~~~~~~~~~~~~~~ 234 (274)
++++++ ...+++++.++|+|||++++.+.. .... ..+ .......++.+
T Consensus 99 l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ 175 (284)
T 3gu3_A 99 LLHMTT--PETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNG-KDGNIGMKIPI 175 (284)
T ss_dssp GGGCSS--HHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTC-CCTTGGGTHHH
T ss_pred hhcCCC--HHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhc-ccccHHHHHHH
Confidence 999853 368999999999999999988765 1100 001 11235678999
Q ss_pred HHhcCCCcEEEE----eecccccCCcc
Q 024008 235 VLQPMGFQAISI----VDNKLAIGPRK 257 (274)
Q Consensus 235 ~~~~~Gf~~~~~----~~~~~~~~~~~ 257 (274)
+++++||..+.+ .....+...++
T Consensus 176 ~l~~aGF~~v~~~~~~~~~~~~~~~~~ 202 (284)
T 3gu3_A 176 YLSELGVKNIECRVSDKVNFLDSNMHH 202 (284)
T ss_dssp HHHHTTCEEEEEEECCCCEEECTTCCS
T ss_pred HHHHcCCCeEEEEEcCCccccCCCCCh
Confidence 999999999988 44444444444
No 55
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.78 E-value=2.2e-18 Score=144.88 Aligned_cols=158 Identities=23% Similarity=0.316 Sum_probs=122.5
Q ss_pred cHHHHHHHhcC--CCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-C
Q 024008 95 APIIVHLHQSG--ALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-W 169 (274)
Q Consensus 95 ~~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 169 (274)
...+..++... ..++.+|||+|||+|..+..+++ ++.+++++|+++.+++.++++....+. .+++++.+|+.. .
T Consensus 22 ~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~ 100 (276)
T 3mgg_A 22 AETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI-KNVKFLQANIFSLP 100 (276)
T ss_dssp -CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGCC
T ss_pred HHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-CCcEEEEcccccCC
Confidence 34455555433 24568999999999999999988 478999999999999999999887765 369999999987 4
Q ss_pred CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC---C-----------------CCCcccCH
Q 024008 170 CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV---G-----------------GPPYKVSV 229 (274)
Q Consensus 170 ~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~---~-----------------~~~~~~~~ 229 (274)
.++++||+|++..+++++++. ..++.++.++|+|||.+++.+....... . ......+.
T Consensus 101 ~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (276)
T 3mgg_A 101 FEDSSFDHIFVCFVLEHLQSP--EEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVG 178 (276)
T ss_dssp SCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGG
T ss_pred CCCCCeeEEEEechhhhcCCH--HHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchH
Confidence 456899999999999999643 5789999999999999999764321110 0 00112356
Q ss_pred HHHHHHHhcCCCcEEEEeecccccCC
Q 024008 230 SDYEEVLQPMGFQAISIVDNKLAIGP 255 (274)
Q Consensus 230 ~~~~~~~~~~Gf~~~~~~~~~~~~~~ 255 (274)
.++.++++++||+++.+.........
T Consensus 179 ~~l~~~l~~aGf~~v~~~~~~~~~~~ 204 (276)
T 3mgg_A 179 RQIYPLLQESGFEKIRVEPRMVYIDS 204 (276)
T ss_dssp GGHHHHHHHTTCEEEEEEEEEEEECT
T ss_pred HHHHHHHHHCCCCeEEEeeEEEECCC
Confidence 89999999999999999987655543
No 56
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.78 E-value=4.4e-18 Score=148.12 Aligned_cols=146 Identities=10% Similarity=0.066 Sum_probs=120.9
Q ss_pred HHHhcCC-CC-CCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--CCC
Q 024008 100 HLHQSGA-LP-KGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--PTE 173 (274)
Q Consensus 100 ~~~~~~~-~~-~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~ 173 (274)
.++.... .+ +.+|||+|||+|..+..+++ ++.+++++|+ +.+++.++++....+..++++++.+|+.+.. +++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 4444432 23 57999999999999999987 5789999999 8899999999888777778999999999854 567
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC----------------CCcccCHHHHHHHHh
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG----------------PPYKVSVSDYEEVLQ 237 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~ 237 (274)
.||+|++..++++++++....+++++.++|+|||++++.+......... .....+.+++.++++
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 327 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVR 327 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHH
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHH
Confidence 7999999999999988888899999999999999999988654432111 122358999999999
Q ss_pred cCCCcEEEE
Q 024008 238 PMGFQAISI 246 (274)
Q Consensus 238 ~~Gf~~~~~ 246 (274)
++||++++.
T Consensus 328 ~aGf~~~~~ 336 (352)
T 3mcz_A 328 DAGLAVGER 336 (352)
T ss_dssp HTTCEEEEE
T ss_pred HCCCceeee
Confidence 999999884
No 57
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=5.3e-18 Score=141.08 Aligned_cols=162 Identities=20% Similarity=0.222 Sum_probs=120.2
Q ss_pred HHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC
Q 024008 97 IIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE 173 (274)
Q Consensus 97 ~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 173 (274)
....++.... .++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++. .+++++.+|+....+++
T Consensus 21 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~ 94 (259)
T 2p35_A 21 PARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLATWKPAQ 94 (259)
T ss_dssp HHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTTCCCSS
T ss_pred HHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhhcCccC
Confidence 3445665543 35579999999999999999884 889999999999999999883 46899999998855678
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------------------C----CCCCcccCHHH
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------------------V----GGPPYKVSVSD 231 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~------------------~----~~~~~~~~~~~ 231 (274)
+||+|+++.++++++ +...++.++.++|+|||.+++........ . .......+.++
T Consensus 95 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (259)
T 2p35_A 95 KADLLYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSD 172 (259)
T ss_dssp CEEEEEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHH
T ss_pred CcCEEEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHH
Confidence 999999999999985 45688999999999999999987543211 0 01223468999
Q ss_pred HHHHHhcCCCcEEEEeecccccCCccchhHHHHhhhh
Q 024008 232 YEEVLQPMGFQAISIVDNKLAIGPRKGREKLGRWKRS 268 (274)
Q Consensus 232 ~~~~~~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (274)
+.++++++||.+..... .... +..+.+.+..|.+.
T Consensus 173 ~~~~l~~aGf~v~~~~~-~~~~-~~~~~~~~~~~l~~ 207 (259)
T 2p35_A 173 YFNALSPKSSRVDVWHT-VYNH-PMKDADSIVEWVKG 207 (259)
T ss_dssp HHHHHGGGEEEEEEEEE-EEEE-EESCHHHHHHHHTT
T ss_pred HHHHHHhcCCceEEEEE-Eeee-ccCCchHHhhhhhc
Confidence 99999999997443332 2111 22344555555553
No 58
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.77 E-value=2.4e-18 Score=141.78 Aligned_cols=137 Identities=20% Similarity=0.244 Sum_probs=111.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++.+. +++++|+++.+++.++++... .+++++.+|+... .+.++||+|++..++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 117 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFDLAYSSLAL 117 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCceEEEEeccc
Confidence 4568999999999999999998888 999999999999999988754 3699999999873 456789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC---C-------------------------------CCCCcccCHH
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH---V-------------------------------GGPPYKVSVS 230 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~---~-------------------------------~~~~~~~~~~ 230 (274)
++++ +...+++++.++|+|||.+++....+... . ....++.+.+
T Consensus 118 ~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 195 (243)
T 3bkw_A 118 HYVE--DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVG 195 (243)
T ss_dssp GGCS--CHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHH
T ss_pred cccc--hHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHH
Confidence 9985 45688999999999999999876432100 0 0011224899
Q ss_pred HHHHHHhcCCCcEEEEeec
Q 024008 231 DYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 231 ~~~~~~~~~Gf~~~~~~~~ 249 (274)
++.++++++||+++.+.+.
T Consensus 196 ~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 196 TTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHcCCEeeeeccC
Confidence 9999999999999998874
No 59
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.77 E-value=4.7e-18 Score=134.40 Aligned_cols=153 Identities=16% Similarity=0.107 Sum_probs=108.9
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCC
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~ 172 (274)
......++.....++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.|+++....++ ++++++..|.... .++
T Consensus 9 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~ 87 (185)
T 3mti_A 9 IHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVR 87 (185)
T ss_dssp HHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhcc
Confidence 4445556665556678999999999999999999988999999999999999999987766 6799999777662 346
Q ss_pred CCeeEEEeccccccc-------ChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 173 ELFDLIFDYTFFCAI-------EPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~-------~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
++||+|+++..+... ..+....+++++.++|+|||++++..+..... +........++.+.+...+|.+..
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~ 165 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDG--GDMEKDAVLEYVIGLDQRVFTAML 165 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--------CHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCC--CHHHHHHHHHHHHhCCCceEEEEE
Confidence 789999987322211 22455678899999999999999988754321 111111233444455566788877
Q ss_pred Eeecc
Q 024008 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
.....
T Consensus 166 ~~~~~ 170 (185)
T 3mti_A 166 YQPLN 170 (185)
T ss_dssp EEESS
T ss_pred ehhhc
Confidence 76644
No 60
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=1.5e-18 Score=144.86 Aligned_cols=140 Identities=16% Similarity=0.090 Sum_probs=113.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++++.+|+|+|+++.+++.++++. +++|+.+|+.+ ..++++||+|++..+++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 105 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPDKSVDGVISILAIH 105 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCTTCBSEEEEESCGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCCCCEeEEEEcchHh
Confidence 45689999999999999999999999999999999988776553 69999999988 44568999999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCC-------------CcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGP-------------PYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
+++ +...+++++.++|+ ||++++.++......... ....+.+++. +++++||..+.+.....+
T Consensus 106 ~~~--~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~~~p 181 (261)
T 3ege_A 106 HFS--HLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPFLLP 181 (261)
T ss_dssp GCS--SHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEECCEE
T ss_pred hcc--CHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEecCC
Confidence 984 45789999999999 998888877643221100 1223567788 999999999999988777
Q ss_pred cCCcc
Q 024008 253 IGPRK 257 (274)
Q Consensus 253 ~~~~~ 257 (274)
...++
T Consensus 182 ~~~~~ 186 (261)
T 3ege_A 182 HDLSD 186 (261)
T ss_dssp TTCSB
T ss_pred CcCcc
Confidence 76654
No 61
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.77 E-value=4.9e-18 Score=143.86 Aligned_cols=154 Identities=14% Similarity=0.142 Sum_probs=110.7
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCC-----------------C---
Q 024008 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPN-----------------A--- 156 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~-----------------~--- 156 (274)
+.+.+.....++.+|||+|||+|.....++. .+.+|+|+|+|+.+++.|++++..... .
T Consensus 61 l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (289)
T 2g72_A 61 LAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECW 140 (289)
T ss_dssp HHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCH
T ss_pred HHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccch
Confidence 3344433234668999999999996554444 467999999999999999986643210 0
Q ss_pred ---------cceEEEEcccCC-C------CCCCCeeEEEecccccccCh--hHHHHHHHHHHhcccCCcEEEEEEccCCC
Q 024008 157 ---------KFVSFLKADFFT-W------CPTELFDLIFDYTFFCAIEP--EMRAAWAQKIKDFLKPDGELITLMFPISD 218 (274)
Q Consensus 157 ---------~~v~~~~~d~~~-~------~~~~~fD~v~~~~~~~~~~~--~~~~~~l~~l~~~L~~gG~l~~~~~~~~~ 218 (274)
..++++.+|+.. . .++++||+|+++.+++++.+ ++...++.++.++|+|||++++.......
T Consensus 141 ~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~ 220 (289)
T 2g72_A 141 QDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEES 220 (289)
T ss_dssp HHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCC
T ss_pred hhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcc
Confidence 015677788876 2 22456999999999998653 37789999999999999999986432211
Q ss_pred C--CCC---CCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024008 219 H--VGG---PPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 219 ~--~~~---~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~ 251 (274)
. ... ....++.+++.++++++||+++.+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 258 (289)
T 2g72_A 221 WYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYIM 258 (289)
T ss_dssp EEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred eEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEeec
Confidence 0 001 12346899999999999999999887663
No 62
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.77 E-value=8.4e-18 Score=140.08 Aligned_cols=141 Identities=15% Similarity=0.149 Sum_probs=112.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++... ...+++++.+|+... .++++||+|++..+++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAG--VDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTT--SCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--cCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 4567999999999999999999889999999999999999999722 235799999999874 4567899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCC-CC--------------CC-----CCcccCHHHHHHHHhcCCCcEEE
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISD-HV--------------GG-----PPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~-~~--------------~~-----~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
+++ +...++.++.++|+|||.+++. ++... .. .+ .....+.+++.++++++||.++.
T Consensus 116 ~~~--~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 192 (263)
T 2yqz_A 116 LVP--DWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRT 192 (263)
T ss_dssp GCT--THHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEE
T ss_pred hcC--CHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcce
Confidence 985 3467899999999999999887 33221 00 01 11235788999999999999887
Q ss_pred Eeecccc
Q 024008 246 IVDNKLA 252 (274)
Q Consensus 246 ~~~~~~~ 252 (274)
+......
T Consensus 193 ~~~~~~~ 199 (263)
T 2yqz_A 193 REVARWR 199 (263)
T ss_dssp EEEEEEE
T ss_pred EEEeeee
Confidence 6554433
No 63
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.76 E-value=8.8e-18 Score=138.00 Aligned_cols=145 Identities=17% Similarity=0.225 Sum_probs=113.1
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeE
Q 024008 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDL 177 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~ 177 (274)
+.+++.....++.+|||+|||+|..+..+++.+.+++|+|+++.+++.|+++. .+++++.+|+.+....++||+
T Consensus 30 ~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~D~ 103 (239)
T 3bxo_A 30 IADLVRSRTPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRLGRKFSA 103 (239)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCCSSCEEE
T ss_pred HHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcccCCCCcE
Confidence 34444433355689999999999999999987779999999999999999886 358999999988555678999
Q ss_pred EEe-cccccccC-hhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----------------------------------
Q 024008 178 IFD-YTFFCAIE-PEMRAAWAQKIKDFLKPDGELITLMFPISDHV----------------------------------- 220 (274)
Q Consensus 178 v~~-~~~~~~~~-~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~----------------------------------- 220 (274)
|++ ..++++++ ++....+++++.++|+|||.+++..+......
T Consensus 104 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (239)
T 3bxo_A 104 VVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVH 183 (239)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEE
Confidence 995 45888884 36778999999999999999998764432211
Q ss_pred ------CC---------CCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 221 ------GG---------PPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 221 ------~~---------~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.+ ....++.+++.++++++||+++.+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~ 226 (239)
T 3bxo_A 184 FTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEG 226 (239)
T ss_dssp EEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESS
T ss_pred EEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEc
Confidence 00 00235889999999999998776644
No 64
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.76 E-value=2.5e-18 Score=145.95 Aligned_cols=143 Identities=19% Similarity=0.259 Sum_probs=108.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCC----------------------------
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNA---------------------------- 156 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~---------------------------- 156 (274)
.++.+|||||||+|..+..+++ .+.+|+|+|+++.+++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 3568999999999999999988 3679999999999999999987654321
Q ss_pred -----------------------------cceEEEEcccCCCC------CCCCeeEEEeccccccc----ChhHHHHHHH
Q 024008 157 -----------------------------KFVSFLKADFFTWC------PTELFDLIFDYTFFCAI----EPEMRAAWAQ 197 (274)
Q Consensus 157 -----------------------------~~v~~~~~d~~~~~------~~~~fD~v~~~~~~~~~----~~~~~~~~l~ 197 (274)
.+++|+.+|+.... ..++||+|++..+++++ +++....+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 57999999998633 56899999999999776 4457789999
Q ss_pred HHHhcccCCcEEEEEEccCCC--CCCCC---------CcccCHHHHHHHHhc--CCCcEEEEeec
Q 024008 198 KIKDFLKPDGELITLMFPISD--HVGGP---------PYKVSVSDYEEVLQP--MGFQAISIVDN 249 (274)
Q Consensus 198 ~l~~~L~~gG~l~~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~--~Gf~~~~~~~~ 249 (274)
+++++|+|||++++....-.. ..... ...+.++++.+++.+ +||..+++...
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 999999999999986432110 00000 112468899999999 99988777653
No 65
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.76 E-value=1e-17 Score=136.54 Aligned_cols=142 Identities=24% Similarity=0.281 Sum_probs=111.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.|+++....+ .+++++.+|+.+. .+.++||+|+++.+++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 346899999999999999999888899999999999999999987665 5799999999883 4567899999999966
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------CCCCCc-----------------------------ccC
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------VGGPPY-----------------------------KVS 228 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~--------~~~~~~-----------------------------~~~ 228 (274)
+.+......++.++.++|+|||.+++........ ..+..+ ..-
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 194 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFNVW 194 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEEECC
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeehhhh
Confidence 6665677889999999999999999876541100 000000 001
Q ss_pred HHHHHHHHhcCCCcEEEEeecc
Q 024008 229 VSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 229 ~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
..++.++++++||..+.+....
T Consensus 195 ~~~~~~~l~~~GF~~v~~~~~~ 216 (227)
T 1ve3_A 195 GKTGVELLAKLYFTKEAEEKVG 216 (227)
T ss_dssp CHHHHHHHHTTTEEEEEEEEET
T ss_pred chHHHHHHHHHhhhHHHHHHhC
Confidence 1478899999999999888743
No 66
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.76 E-value=8e-18 Score=145.45 Aligned_cols=149 Identities=17% Similarity=0.154 Sum_probs=119.7
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCee
Q 024008 99 VHLHQSGALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFD 176 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 176 (274)
..++.....++.+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....++.++++++.+|+.+..+ ++||
T Consensus 158 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~D 235 (334)
T 2ip2_A 158 HEIPRLLDFRGRSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVP-SNGD 235 (334)
T ss_dssp HHHHHHSCCTTCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC-SSCS
T ss_pred HHHHHhCCCCCCEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC-CCCC
Confidence 334443323338999999999999999987 5779999999 99999999988765555689999999988544 6799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC--------------CCcccCHHHHHHHHhcCCCc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG--------------PPYKVSVSDYEEVLQPMGFQ 242 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~Gf~ 242 (274)
+|++..++++++++....+++++.++|+|||++++.+......... .....+.+++.++++++||+
T Consensus 236 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 315 (334)
T 2ip2_A 236 IYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFA 315 (334)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred EEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCc
Confidence 9999999999988877899999999999999999988654322110 01234799999999999999
Q ss_pred EEEEeec
Q 024008 243 AISIVDN 249 (274)
Q Consensus 243 ~~~~~~~ 249 (274)
++++...
T Consensus 316 ~~~~~~~ 322 (334)
T 2ip2_A 316 VERIVDL 322 (334)
T ss_dssp EEEEEEE
T ss_pred eeEEEEC
Confidence 9888764
No 67
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.76 E-value=1.1e-17 Score=137.85 Aligned_cols=140 Identities=19% Similarity=0.217 Sum_probs=113.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecc-ccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYT-FFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~-~~~ 185 (274)
.++.+|||+|||+|..+..+++. .+++++|+++.+++.|+++....+ .+++++.+|+.+....++||+|++.. +++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELPEPVDAITILCDSLN 108 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCSSCEEEEEECTTGGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCCCCcCEEEEeCCchh
Confidence 44689999999999999999888 899999999999999999987654 46999999998754458899999986 888
Q ss_pred cc-ChhHHHHHHHHHHhcccCCcEEEEEEccCCC----------------------------C-------------CCC-
Q 024008 186 AI-EPEMRAAWAQKIKDFLKPDGELITLMFPISD----------------------------H-------------VGG- 222 (274)
Q Consensus 186 ~~-~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~----------------------------~-------------~~~- 222 (274)
++ +.+....+++++.++|+|||.+++....... . ..+
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGR 188 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEEcCCCc
Confidence 88 5567788999999999999999875432100 0 000
Q ss_pred --------CCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 223 --------PPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 223 --------~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
....++.+++.++++++||+++.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 223 (243)
T 3d2l_A 189 YDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGD 223 (243)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEET
T ss_pred eEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecC
Confidence 002368999999999999999988654
No 68
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.76 E-value=3.2e-17 Score=143.08 Aligned_cols=150 Identities=18% Similarity=0.182 Sum_probs=120.5
Q ss_pred HHHHhcCC-CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024008 99 VHLHQSGA-LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 99 ~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~f 175 (274)
..++.... .++.+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....+..++++++.+|+.+... ..+
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 257 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY-PEA 257 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-CCC
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-CCC
Confidence 34444443 3457999999999999999987 5779999999 99999999998887776789999999987532 234
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC---------------C--CCcccCHHHHHHHHhc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG---------------G--PPYKVSVSDYEEVLQP 238 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~---------------~--~~~~~~~~~~~~~~~~ 238 (274)
|+|++..++++++++....+++++.++|+|||++++.++....... + .....+.+++.+++++
T Consensus 258 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~ 337 (359)
T 1x19_A 258 DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILES 337 (359)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHH
T ss_pred CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHH
Confidence 9999999999998877889999999999999999888755432200 0 0111689999999999
Q ss_pred CCCcEEEEeecc
Q 024008 239 MGFQAISIVDNK 250 (274)
Q Consensus 239 ~Gf~~~~~~~~~ 250 (274)
+||+++++....
T Consensus 338 aGf~~v~~~~~~ 349 (359)
T 1x19_A 338 LGYKDVTMVRKY 349 (359)
T ss_dssp HTCEEEEEEEET
T ss_pred CCCceEEEEecC
Confidence 999998887643
No 69
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.76 E-value=1.1e-17 Score=135.01 Aligned_cols=153 Identities=14% Similarity=0.193 Sum_probs=117.1
Q ss_pred cccchhHhhhcCCC--CccCCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHh
Q 024008 74 SSGGWEKCWEEGLT--PWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELS 150 (274)
Q Consensus 74 ~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~ 150 (274)
...+|+..|..... .+........+..++.....++.+|||+|||+|..+..+++.+. +++++|+++.+++.++++.
T Consensus 6 ~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~ 85 (215)
T 2pxx_A 6 EVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACY 85 (215)
T ss_dssp CHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHT
T ss_pred chhHHHHHhccCCCCCCcccccCHHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhc
Confidence 34689999987652 12222234456666655456678999999999999999998776 8999999999999999998
Q ss_pred hcCCCCcceEEEEcccCC-CCCCCCeeEEEecccccccC-------------hhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024008 151 SSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFFCAIE-------------PEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 151 ~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~~~~~-------------~~~~~~~l~~l~~~L~~gG~l~~~~~~~ 216 (274)
... ++++++.+|+.+ ..++++||+|++..+++++. ......+++++.++|+|||.+++..+..
T Consensus 86 ~~~---~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 86 AHV---PQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTC---TTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccC---CCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 652 479999999987 44567899999998887764 3466889999999999999999988543
Q ss_pred CCCCCCCCcccCHHHHHHHHhcCCC
Q 024008 217 SDHVGGPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~Gf 241 (274)
......++...||
T Consensus 163 ------------~~~~~~~~~~~~~ 175 (215)
T 2pxx_A 163 ------------PHFRTRHYAQAYY 175 (215)
T ss_dssp ------------HHHHHHHHCCGGG
T ss_pred ------------cHHHHHHHhcccc
Confidence 2334456666665
No 70
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.76 E-value=1e-17 Score=135.63 Aligned_cols=128 Identities=17% Similarity=0.185 Sum_probs=103.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++.... .+++++.+|+.+..+.++||+|+++.+++|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 34579999999999999999998889999999999999999998765 379999999998767889999999999999
Q ss_pred cCh-hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhc
Q 024008 187 IEP-EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQP 238 (274)
Q Consensus 187 ~~~-~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (274)
+++ +....++.++.++|+|||.+++........... ......+.+..++..
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 178 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRW-GHVAGAETVITILTE 178 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHT-TCSCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhh-hhhhhHHHHHHHHHh
Confidence 974 566788999999999999999876433211000 012345666666654
No 71
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.75 E-value=1.3e-17 Score=146.36 Aligned_cols=142 Identities=18% Similarity=0.108 Sum_probs=116.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....++.++++++.+|+.+..+. .||+|++..++
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~vl 258 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPV-TADVVLLSFVL 258 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC-CEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC-CCCEEEEeccc
Confidence 3457999999999999999987 4679999999 999999999998877767899999999874443 49999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEc--cCCCCCCC--------------CCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMF--PISDHVGG--------------PPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~--~~~~~~~~--------------~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
++++++....+++++.++|+|||++++.+. ........ ....++.+++.++++++||+++.+..
T Consensus 259 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 338 (374)
T 1qzz_A 259 LNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERT 338 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 999877777899999999999999999887 32211000 01235899999999999999998877
Q ss_pred cc
Q 024008 249 NK 250 (274)
Q Consensus 249 ~~ 250 (274)
..
T Consensus 339 ~~ 340 (374)
T 1qzz_A 339 SG 340 (374)
T ss_dssp EC
T ss_pred CC
Confidence 53
No 72
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.75 E-value=3.7e-18 Score=141.99 Aligned_cols=108 Identities=16% Similarity=0.205 Sum_probs=90.2
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeE
Q 024008 99 VHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDL 177 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~ 177 (274)
.+++........+|||||||+|..+..|++.+.+|+|+|+|+.+++.|+++ ++++++++|+.+ ..++++||+
T Consensus 30 ~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~sfD~ 102 (257)
T 4hg2_A 30 FRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPASVDV 102 (257)
T ss_dssp HHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSSCEEE
T ss_pred HHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCCcccE
Confidence 333333333457999999999999999999999999999999999877532 479999999988 567789999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~ 216 (274)
|++..++|+++. ..++.++.++|||||.+++..++.
T Consensus 103 v~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 103 AIAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp EEECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEECCC
Confidence 999999998864 468899999999999999887654
No 73
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.75 E-value=2.3e-17 Score=139.87 Aligned_cols=117 Identities=19% Similarity=0.196 Sum_probs=95.7
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCC---CcceEEEEcccCCC---
Q 024008 96 PIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPN---AKFVSFLKADFFTW--- 169 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~---~~~v~~~~~d~~~~--- 169 (274)
..+..++. ..++.+|||+|||+|..+..+++.+.+|+|+|+|+.+++.|+++....+. ..++.+..+|+...
T Consensus 47 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (293)
T 3thr_A 47 AWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD 124 (293)
T ss_dssp HHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred HHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccc
Confidence 33444443 23568999999999999999999999999999999999999987643322 14688999998873
Q ss_pred -CCCCCeeEEEec-ccccccCh-----hHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 170 -CPTELFDLIFDY-TFFCAIEP-----EMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 170 -~~~~~fD~v~~~-~~~~~~~~-----~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.+.++||+|++. .+++|+++ +....+++++.++|+|||++++...
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 467899999998 89999876 6688999999999999999998653
No 74
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.75 E-value=1.3e-16 Score=138.95 Aligned_cols=147 Identities=17% Similarity=0.169 Sum_probs=118.1
Q ss_pred HHHhcCCCC-CCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCee
Q 024008 100 HLHQSGALP-KGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFD 176 (274)
Q Consensus 100 ~~~~~~~~~-~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 176 (274)
.++.....+ ..+|||||||+|..+..+++ ++.+++..|. |.+++.|+++....+ .++|+++.+|+++.. ...+|
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~-~~~~D 246 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDP-LPEAD 246 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSC-CCCCS
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCC-CCCce
Confidence 344433333 36999999999999999988 7779999997 889999999886554 578999999998753 34589
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCC---------------CcccCHHHHHHHHhcCCC
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGP---------------PYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~Gf 241 (274)
+|++..++|+++++....++++++++|+|||++++.+.-..+....+ ....|.+++.++++++||
T Consensus 247 ~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf 326 (353)
T 4a6d_A 247 LYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGF 326 (353)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTC
T ss_pred EEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCC
Confidence 99999999999988888999999999999999999987654332222 112489999999999999
Q ss_pred cEEEEeec
Q 024008 242 QAISIVDN 249 (274)
Q Consensus 242 ~~~~~~~~ 249 (274)
+.+++...
T Consensus 327 ~~v~v~~~ 334 (353)
T 4a6d_A 327 RDFQFKKT 334 (353)
T ss_dssp EEEEEECC
T ss_pred ceEEEEEc
Confidence 99988764
No 75
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.75 E-value=2.2e-17 Score=132.80 Aligned_cols=128 Identities=12% Similarity=0.025 Sum_probs=106.9
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~ 184 (274)
..++.+|||+|||+|..+..+++.+.+|+++|+++.+++.|+++....+..++++++.+|+.+ ......||+|++...+
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG 132 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc
Confidence 345679999999999999999988889999999999999999999888776689999999988 4444689999987643
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
+ .. +++++.++|+|||++++..... -+..++.+++++.||++..+....
T Consensus 133 ---~---~~-~l~~~~~~LkpgG~lv~~~~~~----------~~~~~~~~~l~~~g~~i~~i~~~~ 181 (204)
T 3njr_A 133 ---S---QA-LYDRLWEWLAPGTRIVANAVTL----------ESETLLTQLHARHGGQLLRIDIAQ 181 (204)
T ss_dssp ---C---HH-HHHHHHHHSCTTCEEEEEECSH----------HHHHHHHHHHHHHCSEEEEEEEEE
T ss_pred ---c---HH-HHHHHHHhcCCCcEEEEEecCc----------ccHHHHHHHHHhCCCcEEEEEeec
Confidence 1 23 8899999999999999887433 257788899999999988876543
No 76
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.75 E-value=1.5e-17 Score=139.63 Aligned_cols=142 Identities=13% Similarity=0.082 Sum_probs=113.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCC-C--CeEEEEeCChH------HHHHHHHHhhcCCCCcceEEEEcc-cCC---CCCC
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASP-E--RYVVGLEISDI------AIKKAEELSSSLPNAKFVSFLKAD-FFT---WCPT 172 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~-~--~~v~~iD~s~~------~~~~a~~~~~~~~~~~~v~~~~~d-~~~---~~~~ 172 (274)
..++.+|||||||+|..+..+++. + .+|+|+|+++. +++.|+++....++.++++++.+| +.. ..++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 120 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIAD 120 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCC
Confidence 345689999999999999999874 3 79999999997 999999999887776789999998 432 2356
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------------------------CCCCCcccC
Q 024008 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------------------------VGGPPYKVS 228 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~------------------------~~~~~~~~~ 228 (274)
++||+|++..+++++++. ..+++.+..+++|||++++.++..... .......++
T Consensus 121 ~~fD~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 198 (275)
T 3bkx_A 121 QHFDRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLIT 198 (275)
T ss_dssp CCCSEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCC
T ss_pred CCEEEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCC
Confidence 789999999999998654 346777777778899999987655322 011123468
Q ss_pred HHHHHHHHhcCCCcEEEEeec
Q 024008 229 VSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 229 ~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
.+++.++++++||+++.+...
T Consensus 199 ~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 199 PDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHHHHTCEEEECCCB
T ss_pred HHHHHHHHHHCCCeeEEEEEe
Confidence 999999999999999988886
No 77
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.75 E-value=1.2e-17 Score=147.00 Aligned_cols=141 Identities=21% Similarity=0.270 Sum_probs=112.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcC-----C-C-CcceEEEEcccCC-------C
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSL-----P-N-AKFVSFLKADFFT-------W 169 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~-----~-~-~~~v~~~~~d~~~-------~ 169 (274)
.++.+|||+|||+|..+..+++ ++.+|+|+|+++.+++.|++++... + . ..+++|+.+|+.+ .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 3567999999999999998887 5679999999999999999987532 1 1 2579999999987 3
Q ss_pred CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC------------CCCCcccCHHHHHHHHh
Q 024008 170 CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV------------GGPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 170 ~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 237 (274)
.++++||+|+++.+++++++ ...++.++.++|+|||++++.+....... ......++.+++.++++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 239 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVA 239 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHH
T ss_pred CCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHH
Confidence 45679999999999999853 57899999999999999999775443210 01112357899999999
Q ss_pred cCCCcEEEEeec
Q 024008 238 PMGFQAISIVDN 249 (274)
Q Consensus 238 ~~Gf~~~~~~~~ 249 (274)
++||..+.+...
T Consensus 240 ~aGF~~v~~~~~ 251 (383)
T 4fsd_A 240 EAGFRDVRLVSV 251 (383)
T ss_dssp HTTCCCEEEEEE
T ss_pred HCCCceEEEEec
Confidence 999998876653
No 78
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.74 E-value=2.2e-17 Score=128.97 Aligned_cols=125 Identities=15% Similarity=0.126 Sum_probs=103.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|..+..+++.+ +|+|+|+++.+++. .++++++.+|+.+..++++||+|+++.+++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVDVVVFNPPYVP 90 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCSEEEECCCCBT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCCEEEECCCCcc
Confidence 566799999999999999999988 99999999999987 1468999999988666689999999988875
Q ss_pred cChh-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeeccccc
Q 024008 187 IEPE-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAI 253 (274)
Q Consensus 187 ~~~~-------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~~ 253 (274)
.++. ....++.++.+.+ |||.+++..... ...+++.++++++||+.+.+.......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~----------~~~~~l~~~l~~~gf~~~~~~~~~~~~ 153 (170)
T 3q87_B 91 DTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA----------NRPKEVLARLEERGYGTRILKVRKILG 153 (170)
T ss_dssp TCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG----------GCHHHHHHHHHHTTCEEEEEEEEECSS
T ss_pred CCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC----------CCHHHHHHHHHHCCCcEEEEEeeccCC
Confidence 4322 2345778888888 999999877433 267899999999999998888765443
No 79
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.74 E-value=5.1e-17 Score=132.40 Aligned_cols=137 Identities=17% Similarity=0.118 Sum_probs=111.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---CCCCCCeeEEEeccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---WCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~fD~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++. .++..+|+.. ..++++||+|++..+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGDV 102 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEESC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECCh
Confidence 45689999999999999999988889999999999999998765 3688899875 234578999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-------------------CCCCCcccCHHHHHHHHhcCCCcEE
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-------------------VGGPPYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~Gf~~~ 244 (274)
++++++. ..++.++.++|+|||.+++........ .......++.+++.++++++||+++
T Consensus 103 l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 180 (230)
T 3cc8_A 103 LEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSIS 180 (230)
T ss_dssp GGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEE
T ss_pred hhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEE
Confidence 9998643 588999999999999999876442210 0011234689999999999999999
Q ss_pred EEeeccccc
Q 024008 245 SIVDNKLAI 253 (274)
Q Consensus 245 ~~~~~~~~~ 253 (274)
.+.......
T Consensus 181 ~~~~~~~~~ 189 (230)
T 3cc8_A 181 KVDRVYVDH 189 (230)
T ss_dssp EEEEEECCC
T ss_pred EEEecccCh
Confidence 998866554
No 80
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.74 E-value=1.2e-18 Score=143.42 Aligned_cols=156 Identities=19% Similarity=0.146 Sum_probs=110.7
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---CCC
Q 024008 96 PIIVHLHQSGALPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---WCP 171 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~ 171 (274)
+.+..+......++++|||||||+|..+..+++. +.++++||+++.+++.|+++....+ .+++++.+|+.. ..+
T Consensus 48 ~~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~ 125 (236)
T 3orh_A 48 PYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSC
T ss_pred HHHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhccccc
Confidence 3444444444567789999999999999999884 4689999999999999999988765 568899988765 456
Q ss_pred CCCeeEEEeccc-----ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCc----ccCHHHHHHHHhcCCCc
Q 024008 172 TELFDLIFDYTF-----FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPY----KVSVSDYEEVLQPMGFQ 242 (274)
Q Consensus 172 ~~~fD~v~~~~~-----~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Gf~ 242 (274)
+++||.|+...+ .+++ .+...+++++.++|||||++++.............+ ....+.+...|.++||+
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~ 203 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFR 203 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCC
T ss_pred ccCCceEEEeeeecccchhhh--cchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCe
Confidence 788999985432 2333 466789999999999999988754221111001111 12345666778889999
Q ss_pred EEEEeecccccCC
Q 024008 243 AISIVDNKLAIGP 255 (274)
Q Consensus 243 ~~~~~~~~~~~~~ 255 (274)
+..+........+
T Consensus 204 ~~~i~~~~~~l~p 216 (236)
T 3orh_A 204 RENIRTEVMALVP 216 (236)
T ss_dssp GGGEEEEEEECCC
T ss_pred EEEEEEEeeccCC
Confidence 8776665444444
No 81
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.74 E-value=1.1e-17 Score=134.42 Aligned_cols=127 Identities=19% Similarity=0.167 Sum_probs=107.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
..++.+|||+|||+|..+..+++.+. +++++|+++.+++.|+++....+..+ ++++.+|+.+.. +++||+|+++.++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV-DGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC-CSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC-CCCceEEEECCcH
Confidence 34668999999999999999988655 99999999999999999998877654 999999998744 4789999998776
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
++ ...+++++.++|+|||++++..+... +.+++.++++++||+++.+...
T Consensus 136 ~~-----~~~~l~~~~~~L~~gG~l~~~~~~~~----------~~~~~~~~~~~~Gf~~~~~~~~ 185 (205)
T 3grz_A 136 EI-----LLDLIPQLDSHLNEDGQVIFSGIDYL----------QLPKIEQALAENSFQIDLKMRA 185 (205)
T ss_dssp HH-----HHHHGGGSGGGEEEEEEEEEEEEEGG----------GHHHHHHHHHHTTEEEEEEEEE
T ss_pred HH-----HHHHHHHHHHhcCCCCEEEEEecCcc----------cHHHHHHHHHHcCCceEEeecc
Confidence 54 36788999999999999999764332 5788999999999999887663
No 82
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.74 E-value=2.6e-17 Score=143.70 Aligned_cols=142 Identities=15% Similarity=0.114 Sum_probs=117.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....++.++++++.+|+.+..+. .||+|++..++
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~vl 259 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR-KADAIILSFVL 259 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS-CEEEEEEESCG
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC-CccEEEEcccc
Confidence 3457999999999999999887 5679999999 999999999988877767899999999874443 49999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEcc-CCCCCCC--------------CCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFP-ISDHVGG--------------PPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~-~~~~~~~--------------~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
++++++....+++++.++|+|||++++.+.. ..+.... .....+.+++.++++++||+++.+...
T Consensus 260 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 339 (360)
T 1tw3_A 260 LNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQL 339 (360)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeC
Confidence 9998777778999999999999999998865 3221100 012358999999999999999988765
Q ss_pred c
Q 024008 250 K 250 (274)
Q Consensus 250 ~ 250 (274)
.
T Consensus 340 ~ 340 (360)
T 1tw3_A 340 P 340 (360)
T ss_dssp E
T ss_pred C
Confidence 3
No 83
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=5.7e-17 Score=134.36 Aligned_cols=116 Identities=22% Similarity=0.317 Sum_probs=96.0
Q ss_pred HHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCC
Q 024008 96 PIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTEL 174 (274)
Q Consensus 96 ~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 174 (274)
..+..++.... .++.+|||+|||+|..+..+++.+.+++|+|+++.+++.|+++....+. +++++.+|+.+....++
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~ 105 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFKNE 105 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCCSC
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccCCC
Confidence 33455555443 3557999999999999999999899999999999999999999876653 69999999988655678
Q ss_pred eeEEEec-ccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 175 FDLIFDY-TFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 fD~v~~~-~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
||+|++. ..+++++.+....+++++.++|+|||.+++..
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 9999987 45666776778899999999999999988743
No 84
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.73 E-value=4.5e-17 Score=141.58 Aligned_cols=136 Identities=13% Similarity=0.125 Sum_probs=108.8
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
++.+|||||||+|..+..+++ ++.+++++|+ +.++. +.+....+..++++++.+|++...| +||+|++..+++
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p--~~D~v~~~~vlh 258 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREVP--HADVHVLKRILH 258 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCCC--CCSEEEEESCGG
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCCC--CCcEEEEehhcc
Confidence 347999999999999999988 6678999999 55554 3333334455689999999986554 899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC--------------CCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG--------------PPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
+++++....++++++++|+|||++++.+......... .....+.+++.++++++||+++++..
T Consensus 259 ~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 259 NWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp GSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 9988877899999999999999999988654332111 11135899999999999999999876
No 85
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.73 E-value=5.2e-17 Score=138.19 Aligned_cols=142 Identities=19% Similarity=0.171 Sum_probs=109.0
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhh---CCCCeEEEEeCChHHHHHHHHHhhcC-CCCcceEEEEcccCC-CCCC
Q 024008 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMA---SPERYVVGLEISDIAIKKAEELSSSL-PNAKFVSFLKADFFT-WCPT 172 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~---~~~~~v~~iD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~-~~~~ 172 (274)
...+......++.+|||+|||+|..+..++ ..+.+|+|+|+++.+++.|+++.... +...+++|+++|+.+ ..+.
T Consensus 26 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 105 (299)
T 3g5t_A 26 YKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG 105 (299)
T ss_dssp HHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC
T ss_pred HHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc
Confidence 333434334567899999999999999999 67889999999999999999998765 334689999999988 3334
Q ss_pred ------CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC---------------C--CCCCcc--c
Q 024008 173 ------ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH---------------V--GGPPYK--V 227 (274)
Q Consensus 173 ------~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~---------------~--~~~~~~--~ 227 (274)
++||+|++..+++++ +...++.++.++|+|||.+++..+..... . ...++. .
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p 182 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQP 182 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTT
T ss_pred cccccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhch
Confidence 689999999999998 44688999999999999998855432110 0 011122 3
Q ss_pred CHHHHHHHHhcCCCc
Q 024008 228 SVSDYEEVLQPMGFQ 242 (274)
Q Consensus 228 ~~~~~~~~~~~~Gf~ 242 (274)
..+.+.+++++.||.
T Consensus 183 ~~~~~~~~l~~~gfp 197 (299)
T 3g5t_A 183 GRSRLRNMLKDSHLD 197 (299)
T ss_dssp HHHHHHTTTTTCCCC
T ss_pred hhHHHHHhhhccCCC
Confidence 456678999999994
No 86
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.73 E-value=7.6e-17 Score=131.83 Aligned_cols=136 Identities=16% Similarity=0.084 Sum_probs=107.4
Q ss_pred HhcCCCCCCeEEEEcCC-cchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC--CCCCCCeeE
Q 024008 102 HQSGALPKGRALVPGCG-TGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT--WCPTELFDL 177 (274)
Q Consensus 102 ~~~~~~~~~~vLDiG~G-~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~fD~ 177 (274)
+.....++.+|||+||| +|..+..+++. +.+|+|+|+++.+++.|+++....+. +++++.+|+.. ..++++||+
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEE
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeE
Confidence 34444567899999999 99999999886 88999999999999999999988875 79999999643 344589999
Q ss_pred EEecccccccCh-----------------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC
Q 024008 178 IFDYTFFCAIEP-----------------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 178 v~~~~~~~~~~~-----------------~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 240 (274)
|+++.++...+. .....+++.+.++|+|||++++..... ....+++.++++++|
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~~~l~~~g 197 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK---------EKLLNVIKERGIKLG 197 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC---------HHHHHHHHHHHHHTT
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc---------HhHHHHHHHHHHHcC
Confidence 999987765432 123678999999999999999865221 124678999999999
Q ss_pred CcEEEEee
Q 024008 241 FQAISIVD 248 (274)
Q Consensus 241 f~~~~~~~ 248 (274)
|.+..+..
T Consensus 198 ~~~~~~~~ 205 (230)
T 3evz_A 198 YSVKDIKF 205 (230)
T ss_dssp CEEEEEEE
T ss_pred CceEEEEe
Confidence 98776644
No 87
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.73 E-value=2.6e-17 Score=140.15 Aligned_cols=143 Identities=15% Similarity=0.157 Sum_probs=106.6
Q ss_pred CCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCc-----ceEEEEcccCC---------CCCC
Q 024008 108 PKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAK-----FVSFLKADFFT---------WCPT 172 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~-----~v~~~~~d~~~---------~~~~ 172 (274)
++.+|||+|||+|..+..++. .+.+|+|+|+|+.+++.|+++....+... +++|.+.|+.. ..++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 357999999999987765554 45799999999999999999876543211 26788888732 2356
Q ss_pred CCeeEEEeccccccc-ChhHHHHHHHHHHhcccCCcEEEEEEccCCC-------------------C-------------
Q 024008 173 ELFDLIFDYTFFCAI-EPEMRAAWAQKIKDFLKPDGELITLMFPISD-------------------H------------- 219 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~-~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~-------------------~------------- 219 (274)
++||+|+|..+++++ +.++...+++++.++|+|||++++...+... .
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 207 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRI 207 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccccc
Confidence 799999999999875 3345578999999999999999886642110 0
Q ss_pred ----CCC-----CCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 220 ----VGG-----PPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 220 ----~~~-----~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
..+ +.+.++.+++.++++++||+++......
T Consensus 208 ~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~ 247 (302)
T 2vdw_A 208 VVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFA 247 (302)
T ss_dssp EEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHH
T ss_pred ceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChH
Confidence 000 1134577999999999999999987644
No 88
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=5.4e-18 Score=139.43 Aligned_cols=136 Identities=17% Similarity=0.096 Sum_probs=101.0
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEe-
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFD- 180 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~fD~v~~- 180 (274)
..++.+|||+|||+|..+..+++.+. +|+|+|+++.+++.|+++....+ .+++++.+|+.+. .++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEEC
Confidence 44567999999999999999988554 99999999999999999987765 5799999998763 55689999998
Q ss_pred cccc--cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcc----cCHHHHHHHHhcCCCcE
Q 024008 181 YTFF--CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYK----VSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 181 ~~~~--~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Gf~~ 243 (274)
...+ ..........++.++.++|||||++++.++..........+. ...+.....+.++||..
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 4443 223334566789999999999999998764421110011111 12345567788999985
No 89
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.72 E-value=6.7e-17 Score=131.29 Aligned_cols=128 Identities=22% Similarity=0.239 Sum_probs=105.7
Q ss_pred CCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEeccccccc
Q 024008 109 KGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFFCAI 187 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~~~~ 187 (274)
+.+|||+|||+|..+..++.. +++|+++.+++.++++ +++++.+|+.. ..+.++||+|++..+++++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICFV 115 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGGS
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhhc
Confidence 789999999999999988776 9999999999999887 37899999877 3445789999999999998
Q ss_pred ChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-------------CCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 188 EPEMRAAWAQKIKDFLKPDGELITLMFPISDH-------------VGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 188 ~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
+ +...+++++.++|+|||.+++........ .......++.+++.++++++||+++.+....
T Consensus 116 ~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 116 D--DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred c--CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEeccc
Confidence 5 34678999999999999999987654311 0111233689999999999999999888754
No 90
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.72 E-value=7.3e-17 Score=135.79 Aligned_cols=140 Identities=16% Similarity=0.167 Sum_probs=110.3
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCC
Q 024008 97 IIVHLHQSGALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTEL 174 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 174 (274)
.+..++.....++.+|||+|||+|..+..+++ ++.+++++|+|+.+++.|+++....+.. +++++.+|+.+..+.++
T Consensus 98 l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~ 176 (276)
T 2b3t_A 98 LVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQ 176 (276)
T ss_dssp HHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGTTCC
T ss_pred HHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhcccCC
Confidence 34444444334567999999999999999986 5789999999999999999998876654 69999999988665678
Q ss_pred eeEEEecccccccCh-----------------------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHH
Q 024008 175 FDLIFDYTFFCAIEP-----------------------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSD 231 (274)
Q Consensus 175 fD~v~~~~~~~~~~~-----------------------~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~ 231 (274)
||+|+++.++..... .....++..+.++|+|||++++... ....++
T Consensus 177 fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~-----------~~~~~~ 245 (276)
T 2b3t_A 177 FAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG-----------WQQGEA 245 (276)
T ss_dssp EEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------SSCHHH
T ss_pred ccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------chHHHH
Confidence 999999866543211 3457889999999999999988641 125789
Q ss_pred HHHHHhcCCCcEEEEee
Q 024008 232 YEEVLQPMGFQAISIVD 248 (274)
Q Consensus 232 ~~~~~~~~Gf~~~~~~~ 248 (274)
+.++++++||..+.+..
T Consensus 246 ~~~~l~~~Gf~~v~~~~ 262 (276)
T 2b3t_A 246 VRQAFILAGYHDVETCR 262 (276)
T ss_dssp HHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHCCCcEEEEEe
Confidence 99999999998765543
No 91
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.72 E-value=2.4e-17 Score=137.08 Aligned_cols=133 Identities=19% Similarity=0.238 Sum_probs=109.1
Q ss_pred HHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEE
Q 024008 100 HLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIF 179 (274)
Q Consensus 100 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~ 179 (274)
+.+.....++.+|||+|||+|..+..+++.+.+|+++|+++.+++.++++...++.. +++..+|+....+.++||+|+
T Consensus 112 ~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~~~fD~Vv 189 (254)
T 2nxc_A 112 KALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPFGPFDLLV 189 (254)
T ss_dssp HHHHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGGCCEEEEE
T ss_pred HHHHHhcCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcCCCCCEEE
Confidence 333333456789999999999999999988889999999999999999999887654 899999987754567899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
++...+ ....++..+.++|+|||++++..... .+.+++.+.++++||+++.+...
T Consensus 190 ~n~~~~-----~~~~~l~~~~~~LkpgG~lils~~~~----------~~~~~v~~~l~~~Gf~~~~~~~~ 244 (254)
T 2nxc_A 190 ANLYAE-----LHAALAPRYREALVPGGRALLTGILK----------DRAPLVREAMAGAGFRPLEEAAE 244 (254)
T ss_dssp EECCHH-----HHHHHHHHHHHHEEEEEEEEEEEEEG----------GGHHHHHHHHHHTTCEEEEEEEE
T ss_pred ECCcHH-----HHHHHHHHHHHHcCCCCEEEEEeecc----------CCHHHHHHHHHHCCCEEEEEecc
Confidence 875543 34678899999999999999876433 25789999999999999887653
No 92
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.72 E-value=2.5e-16 Score=127.02 Aligned_cols=129 Identities=19% Similarity=0.194 Sum_probs=104.2
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCee
Q 024008 99 VHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFD 176 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD 176 (274)
.+++.....++.+|||+|||+|..+..+ +. +++++|+++.+++.++++. .+++++.+|+.+ ..++++||
T Consensus 27 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD 97 (211)
T 2gs9_A 27 ERALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFD 97 (211)
T ss_dssp HHHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEE
T ss_pred HHHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEE
Confidence 3455544446789999999999999888 66 9999999999999999987 358999999987 44567899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC----------CCC----CCcccCHHHHHHHHhcCC
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH----------VGG----PPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~----------~~~----~~~~~~~~~~~~~~~~~G 240 (274)
+|++..++++++ +...++.++.++|+|||.+++........ ... ....++.+++.++++ |
T Consensus 98 ~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 98 VVLLFTTLEFVE--DVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EEEEESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred EEEEcChhhhcC--CHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 999999999986 34688999999999999999988655321 111 123479999999999 7
No 93
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.72 E-value=1.5e-16 Score=127.83 Aligned_cols=132 Identities=11% Similarity=0.012 Sum_probs=105.5
Q ss_pred HHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-CCCC
Q 024008 99 VHLHQSG-ALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-PTEL 174 (274)
Q Consensus 99 ~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~ 174 (274)
..++... ..++.+|||+|||+|..+..+++.+ .+++++|+++.+++.|+++....+. ++++++.+|+.+.. ..++
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~ 108 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLPD 108 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSCC
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCCC
Confidence 3344443 3456799999999999999998844 7999999999999999999887766 67999999997643 3378
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
||+|++..+++ ....+++++.++|+|||++++..... .+.+++.++++++|| .+++.
T Consensus 109 ~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~~~~~~l~~~g~-~~~~~ 165 (204)
T 3e05_A 109 PDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL----------DTLTKAVEFLEDHGY-MVEVA 165 (204)
T ss_dssp CSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH----------HHHHHHHHHHHHTTC-EEEEE
T ss_pred CCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc----------ccHHHHHHHHHHCCC-ceeEE
Confidence 99999887765 33578999999999999999976432 257889999999999 44433
No 94
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.71 E-value=9.8e-17 Score=125.73 Aligned_cols=126 Identities=15% Similarity=0.034 Sum_probs=104.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC--CCeeEEEecc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT--ELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~fD~v~~~~ 182 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++....+...++ ++.+|.....+. ++||+|++..
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECC
Confidence 45579999999999999999884 679999999999999999999888776678 888988664433 7899999998
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
++++ ..+++++.++|+|||++++..... .+...+.++++..|+.+..+...
T Consensus 103 ~~~~------~~~l~~~~~~L~~gG~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 153 (178)
T 3hm2_A 103 GLTA------PGVFAAAWKRLPVGGRLVANAVTV----------ESEQMLWALRKQFGGTISSFAIS 153 (178)
T ss_dssp -TTC------TTHHHHHHHTCCTTCEEEEEECSH----------HHHHHHHHHHHHHCCEEEEEEEE
T ss_pred cccH------HHHHHHHHHhcCCCCEEEEEeecc----------ccHHHHHHHHHHcCCeeEEEEee
Confidence 8876 357899999999999999877433 25678888999999888776553
No 95
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.71 E-value=7.4e-17 Score=130.61 Aligned_cols=131 Identities=14% Similarity=0.035 Sum_probs=103.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEec
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~fD~v~~~ 181 (274)
.++.+|||+|||+|..+..+++ ++.+++|+|+++.+++.|+++....++ .++.++.+|+... .+.++||+|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 4567999999999999999987 467999999999999999999887665 5799999999873 456789999988
Q ss_pred ccccccChh------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 182 TFFCAIEPE------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 182 ~~~~~~~~~------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
....+.... ....++..+.++|+|||.+++..... -..+++.+.++++||..+.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR----------GLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH----------HHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH----------HHHHHHHHHHHHCCCeeeeccc
Confidence 654322110 12468999999999999998875211 0236777889999999888764
No 96
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.71 E-value=1.9e-16 Score=132.05 Aligned_cols=132 Identities=15% Similarity=0.153 Sum_probs=108.5
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---CCCCeeEEEeccc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---PTELFDLIFDYTF 183 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~fD~v~~~~~ 183 (274)
++.+|||+|||+|..+..+++.+. +|+|+|+++.+++.|++++...++.++++++.+|+.+.. +.++||+|+++.+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 578999999999999999998655 999999999999999999998888778999999998843 4689999999877
Q ss_pred cccc------C------------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 184 FCAI------E------------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 184 ~~~~------~------------~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
+... . ......++..+.++|+|||++++.... ....++.+.++++||....
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-----------~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP-----------ERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-----------TTHHHHHHHHHHTTEEEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-----------HHHHHHHHHHHHCCCceEE
Confidence 6433 0 123467999999999999999986522 1577899999999999888
Q ss_pred Eeecc
Q 024008 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
+....
T Consensus 198 ~~~v~ 202 (259)
T 3lpm_A 198 IQFVH 202 (259)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 77643
No 97
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.71 E-value=1e-16 Score=127.92 Aligned_cols=148 Identities=16% Similarity=0.110 Sum_probs=108.6
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCCC
Q 024008 99 VHLHQSGALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPTE 173 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~ 173 (274)
..++.....++.+|||+|||+|..+..+++ +..+++++|+++.+++.|+++....++.++++++.+|+... ..++
T Consensus 13 ~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 92 (197)
T 3eey_A 13 HDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDC 92 (197)
T ss_dssp HHHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCS
T ss_pred HHHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccC
Confidence 333333345678999999999999998887 34699999999999999999998887767899999998773 4557
Q ss_pred CeeEEEecccccc-------cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH---hcCCCcE
Q 024008 174 LFDLIFDYTFFCA-------IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL---QPMGFQA 243 (274)
Q Consensus 174 ~fD~v~~~~~~~~-------~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Gf~~ 243 (274)
+||+|+++..+.. ........++.++.++|+|||++++..+...... ......+.+++ ...+|.+
T Consensus 93 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~v 167 (197)
T 3eey_A 93 PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTG-----FEEKEKVLEFLKGVDQKKFIV 167 (197)
T ss_dssp CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTB-----SHHHHHHHHHHTTSCTTTEEE
T ss_pred CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCc-----HHHHHHHHHHHHhCCCCcEEE
Confidence 8999998875511 1223456799999999999999999886542211 11233344444 4567888
Q ss_pred EEEeeccc
Q 024008 244 ISIVDNKL 251 (274)
Q Consensus 244 ~~~~~~~~ 251 (274)
........
T Consensus 168 ~~~~~~~~ 175 (197)
T 3eey_A 168 QRTDFINQ 175 (197)
T ss_dssp EEEEETTC
T ss_pred EEEEeccC
Confidence 77766544
No 98
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.71 E-value=3.3e-16 Score=124.11 Aligned_cols=133 Identities=17% Similarity=0.158 Sum_probs=106.7
Q ss_pred HHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCc-ceEEEEcccCCCCCCC
Q 024008 96 PIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAK-FVSFLKADFFTWCPTE 173 (274)
Q Consensus 96 ~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~~~ 173 (274)
.....++.... .++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....+..+ +++++.+|+.+..+.+
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 44445555443 356799999999999999998888899999999999999999988776543 4999999998866677
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM 239 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (274)
+||+|+++.++++ ..+....+++++.++|+|||.+++...... ...++.+.+++.
T Consensus 119 ~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------~~~~~~~~l~~~ 173 (194)
T 1dus_A 119 KYNKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ----------GAKSLAKYMKDV 173 (194)
T ss_dssp CEEEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTH----------HHHHHHHHHHHH
T ss_pred CceEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCC----------ChHHHHHHHHHH
Confidence 9999999888775 235667899999999999999999875432 244577777776
No 99
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.70 E-value=3.2e-16 Score=137.16 Aligned_cols=132 Identities=16% Similarity=0.203 Sum_probs=108.7
Q ss_pred CCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 109 KGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
..+|||||||+|..+..+++ ++.+++++|+ +.+++.+++. ++++|+.+|+++..+.+ |+|++..++|+
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~p~~--D~v~~~~vlh~ 273 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFDGVPKG--DAIFIKWICHD 273 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCCC--SEEEEESCGGG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCCCCCCC--CEEEEechhhc
Confidence 47999999999999999988 7789999999 8888766532 47999999998855543 99999999999
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC-------------------CCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG-------------------PPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
++++....++++++++|+|||++++.+......... .....+.+++.++++++||+.+++.
T Consensus 274 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 353 (368)
T 3reo_A 274 WSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVA 353 (368)
T ss_dssp BCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEE
Confidence 998888899999999999999999988654332111 1123478999999999999999987
Q ss_pred ecc
Q 024008 248 DNK 250 (274)
Q Consensus 248 ~~~ 250 (274)
...
T Consensus 354 ~~~ 356 (368)
T 3reo_A 354 SCA 356 (368)
T ss_dssp EEE
T ss_pred EeC
Confidence 754
No 100
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.69 E-value=1.6e-16 Score=125.67 Aligned_cols=126 Identities=21% Similarity=0.170 Sum_probs=104.7
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC-CCeeEEEecccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT-ELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~ 184 (274)
..++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....+...++++..+|+....+. ++||+|++..++
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 110 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSG 110 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCT
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCch
Confidence 3456899999999999999999977999999999999999999988777656899999998763333 689999998876
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 246 (274)
+++ ..+++.+.++|+|||.+++..... .+..++.++++++||.+..+
T Consensus 111 ~~~-----~~~l~~~~~~l~~gG~l~~~~~~~----------~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 111 GEL-----QEILRIIKDKLKPGGRIIVTAILL----------ETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp TCH-----HHHHHHHHHTEEEEEEEEEEECBH----------HHHHHHHHHHHHTTCCCEEE
T ss_pred HHH-----HHHHHHHHHhcCCCcEEEEEecCc----------chHHHHHHHHHHCCCceEEE
Confidence 543 578899999999999999887432 25678889999999955443
No 101
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.69 E-value=3.7e-16 Score=125.60 Aligned_cols=123 Identities=13% Similarity=0.153 Sum_probs=100.9
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
++.+|||+|||+|..+..++. ++.+++++|+++.+++.++++....+..+ ++++.+|+....+.++||+|+++.+ .
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~D~i~~~~~-~ 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPSEPPFDGVISRAF-A 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCCCSCEEEEECSCS-S
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCccCCcCEEEEecc-C
Confidence 468999999999999998887 57899999999999999999988776644 9999999988666678999997643 2
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
....++..+.++|+|||.+++.... ...+++.++++ ||.++.+....
T Consensus 143 -----~~~~~l~~~~~~L~~gG~l~~~~~~-----------~~~~~~~~~~~--g~~~~~~~~~~ 189 (207)
T 1jsx_A 143 -----SLNDMVSWCHHLPGEQGRFYALKGQ-----------MPEDEIALLPE--EYQVESVVKLQ 189 (207)
T ss_dssp -----SHHHHHHHHTTSEEEEEEEEEEESS-----------CCHHHHHTSCT--TEEEEEEEEEE
T ss_pred -----CHHHHHHHHHHhcCCCcEEEEEeCC-----------CchHHHHHHhc--CCceeeeeeec
Confidence 2357899999999999999987521 14677777776 99988876544
No 102
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.69 E-value=2.2e-16 Score=133.96 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=100.3
Q ss_pred CCCeEEEEcCCcchhHHHh----hC--CCCeE--EEEeCChHHHHHHHHHhhcCCCCcceEE--EEcccCCC-------C
Q 024008 108 PKGRALVPGCGTGYDVVAM----AS--PERYV--VGLEISDIAIKKAEELSSSLPNAKFVSF--LKADFFTW-------C 170 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l----~~--~~~~v--~~iD~s~~~~~~a~~~~~~~~~~~~v~~--~~~d~~~~-------~ 170 (274)
++.+|||||||+|..+..+ +. ++..+ +++|+|+++++.|++++...+...++.+ ..++..+. .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 4579999999999765433 22 45544 9999999999999999765321134544 45555432 3
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----------CC--CCCcccCHHHHHHHHh
Q 024008 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----------VG--GPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~ 237 (274)
++++||+|++..++++++ +...++.+++++|||||++++........ .. .....++.+++.++++
T Consensus 132 ~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp CCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred CCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 468899999999999996 34678999999999999999876543210 00 1123468999999999
Q ss_pred cCCCcEEEEe
Q 024008 238 PMGFQAISIV 247 (274)
Q Consensus 238 ~~Gf~~~~~~ 247 (274)
++||+++...
T Consensus 210 ~aGf~~~~~~ 219 (292)
T 2aot_A 210 NLGLKYECYD 219 (292)
T ss_dssp HHTCCEEEEE
T ss_pred HCCCceEEEE
Confidence 9999987643
No 103
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.69 E-value=8e-17 Score=125.73 Aligned_cols=135 Identities=10% Similarity=-0.024 Sum_probs=100.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|.++..++. ++++|+++|+|+.+++.+++++...+...++++ .|.....++++||+|++..++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKML 125 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETCH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhHH
Confidence 4468999999999999999977 577999999999999999999988876556666 666555667889999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
|++ ++.+..+.++.+.|+|||+++...-..-..........-...+.+.+.+-++.+.+
T Consensus 126 HlL--~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~ 184 (200)
T 3fzg_A 126 PVL--KQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDS 184 (200)
T ss_dssp HHH--HHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEE
T ss_pred Hhh--hhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeee
Confidence 999 45556677999999999998876622211111111222356667777554444433
No 104
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.69 E-value=8.3e-17 Score=135.04 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=86.2
Q ss_pred CCCCCeEEEEcCCcchhH-HHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024008 106 ALPKGRALVPGCGTGYDV-VAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~-~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 183 (274)
..++.+|||||||+|..+ ..+++ .+++|+|+|+++++++.|++++...++ ++++|+++|+.+.. +++||+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~-d~~FDvV~~~a~ 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID-GLEFDVLMVAAL 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG-GCCCSEEEECTT
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC-CCCcCEEEECCC
Confidence 456689999999998765 44555 789999999999999999999988777 78999999998754 688999997654
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
. ++...+++++.++|+|||++++...+
T Consensus 198 ---~--~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 198 ---A--EPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp ---C--SCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ---c--cCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 2 34467899999999999999997743
No 105
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.69 E-value=2.8e-16 Score=134.53 Aligned_cols=142 Identities=17% Similarity=0.151 Sum_probs=110.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCC------CCcceEEEEcccCCCC-------CC
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLP------NAKFVSFLKADFFTWC-------PT 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~------~~~~v~~~~~d~~~~~-------~~ 172 (274)
.++.+|||+|||+|..+..+++ .+.+++++|+++.+++.|+++....+ ...+++++++|+.... +.
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3567999999999999998886 46699999999999999999875431 1246999999998742 24
Q ss_pred CCeeEEEeccccccc--ChhHHHHHHHHHHhcccCCcEEEEEEccCC---------------C--------CC-C-----
Q 024008 173 ELFDLIFDYTFFCAI--EPEMRAAWAQKIKDFLKPDGELITLMFPIS---------------D--------HV-G----- 221 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~--~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~---------------~--------~~-~----- 221 (274)
++||+|++..+++++ +.+....++.++.++|+|||.+++...+.. . .. .
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 589999999999987 446678999999999999999998765321 0 00 0
Q ss_pred ------------CCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 222 ------------GPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 222 ------------~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.+.+.++.+++.+++++.||+++....
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~ 231 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKT 231 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEE
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecC
Confidence 011235788999999999999998876
No 106
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.69 E-value=2.1e-16 Score=133.17 Aligned_cols=133 Identities=12% Similarity=0.035 Sum_probs=108.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
..++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|++++..+++.++++++.+|+.+..+.++||+|++....
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch
Confidence 34578999999999999999998666 69999999999999999999888877799999999986667899999986553
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.. ..++..+.++|+|||.+++..+...... ..-..+++.+.++++||.+..+..
T Consensus 203 ~~------~~~l~~~~~~LkpgG~l~~~~~~~~~~~----~~~~~~~i~~~~~~~G~~~~~~~~ 256 (278)
T 2frn_A 203 RT------HEFIPKALSIAKDGAIIHYHNTVPEKLM----PREPFETFKRITKEYGYDVEKLNE 256 (278)
T ss_dssp SG------GGGHHHHHHHEEEEEEEEEEEEEEGGGT----TTTTHHHHHHHHHHTTCEEEEEEE
T ss_pred hH------HHHHHHHHHHCCCCeEEEEEEeeccccc----cccHHHHHHHHHHHcCCeeEEeee
Confidence 32 3577899999999999999887642211 112568889999999999877433
No 107
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.69 E-value=1.7e-16 Score=130.78 Aligned_cols=130 Identities=16% Similarity=0.183 Sum_probs=103.1
Q ss_pred CCCeEEEEcCCcchhHHHhh--CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEec
Q 024008 108 PKGRALVPGCGTGYDVVAMA--SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~--~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~~~ 181 (274)
++.+|||+|||+|..+..++ .++.+|+++|+++.+++.|+++....++. +++++.+|+.+... .++||+|++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEEEe
Confidence 46799999999999999888 57889999999999999999998877664 59999999876331 4789999987
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
.+ .....+++.+.++|+|||.+++.... .......++.+.++.+||.++.+.....+
T Consensus 149 ~~------~~~~~~l~~~~~~LkpgG~l~~~~g~--------~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 205 (240)
T 1xdz_A 149 AV------ARLSVLSELCLPLVKKNGLFVALKAA--------SAEEELNAGKKAITTLGGELENIHSFKLP 205 (240)
T ss_dssp CC------SCHHHHHHHHGGGEEEEEEEEEEECC---------CHHHHHHHHHHHHHTTEEEEEEEEEECT
T ss_pred cc------CCHHHHHHHHHHhcCCCCEEEEEeCC--------CchHHHHHHHHHHHHcCCeEeEEEEEecC
Confidence 63 23467899999999999999886421 11123456778889999999888765433
No 108
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.68 E-value=4.3e-16 Score=130.88 Aligned_cols=132 Identities=15% Similarity=0.123 Sum_probs=106.5
Q ss_pred CCeEEEEcCCc---chhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC------------CC
Q 024008 109 KGRALVPGCGT---GYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW------------CP 171 (274)
Q Consensus 109 ~~~vLDiG~G~---G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------------~~ 171 (274)
..+|||||||+ |..+..+.+ ++.+|+++|+|+.+++.|++++... ++++++.+|+.+. .+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCCCchhhhccchhhccCC
Confidence 37999999999 988766654 6789999999999999999998543 5799999999752 22
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------------CCCCCcccCHHHHHHHHhcC
Q 024008 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------------VGGPPYKVSVSDYEEVLQPM 239 (274)
Q Consensus 172 ~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 239 (274)
..+||+|++..++++++++....+++++.++|+|||++++..+..... ...+....+.+++.++| .
T Consensus 155 ~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l--~ 232 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQF--G 232 (274)
T ss_dssp TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT--T
T ss_pred CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh--C
Confidence 358999999999999987667889999999999999999988765320 01123346899999999 4
Q ss_pred CCcEEE
Q 024008 240 GFQAIS 245 (274)
Q Consensus 240 Gf~~~~ 245 (274)
||++++
T Consensus 233 G~~l~~ 238 (274)
T 2qe6_A 233 DFELVE 238 (274)
T ss_dssp TCEECT
T ss_pred CCeEcc
Confidence 998765
No 109
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.68 E-value=5e-16 Score=135.74 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=108.9
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
+..+|||||||+|..+..+++ ++.+++++|+ +.+++.|++. ++++|+.+|+++..+.+ |+|++..++|
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~~~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFKEVPSG--DTILMKWILH 270 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCCC--SEEEEESCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCCCCCCC--CEEEehHHhc
Confidence 347999999999999999987 7789999999 8887766532 57999999998855543 9999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC-------------------CCcccCHHHHHHHHhcCCCcEEEE
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG-------------------PPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~Gf~~~~~ 246 (274)
+++++....++++++++|+|||++++.+....+.... .....+.+++.++++++||+.+++
T Consensus 271 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~ 350 (364)
T 3p9c_A 271 DWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKS 350 (364)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEE
Confidence 9998888899999999999999999988654332111 112247899999999999999998
Q ss_pred eecc
Q 024008 247 VDNK 250 (274)
Q Consensus 247 ~~~~ 250 (274)
....
T Consensus 351 ~~~~ 354 (364)
T 3p9c_A 351 TYIY 354 (364)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 7653
No 110
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.68 E-value=7.7e-17 Score=131.66 Aligned_cols=134 Identities=15% Similarity=0.166 Sum_probs=105.4
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC--CCC-
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT--WCP- 171 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~- 171 (274)
...+..++.....++.+|||+|||+|..+..+++.+.+|+++|+++.+++.++++. ++++++.+|+.. +.+
T Consensus 35 ~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~ 108 (226)
T 3m33_A 35 ELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANA------PHADVYEWNGKGELPAGL 108 (226)
T ss_dssp THHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHC------TTSEEEECCSCSSCCTTC
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhC------CCceEEEcchhhccCCcC
Confidence 44455555443456789999999999999999998899999999999999999983 469999999965 333
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024008 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 172 ~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~ 251 (274)
+++||+|+++. ....++.++.++|+|||.++... ...+..++.+.++++||..+.+.....
T Consensus 109 ~~~fD~v~~~~--------~~~~~l~~~~~~LkpgG~l~~~~-----------~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 169 (226)
T 3m33_A 109 GAPFGLIVSRR--------GPTSVILRLPELAAPDAHFLYVG-----------PRLNVPEVPERLAAVGWDIVAEDHVSV 169 (226)
T ss_dssp CCCEEEEEEES--------CCSGGGGGHHHHEEEEEEEEEEE-----------SSSCCTHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCEEEEEeCC--------CHHHHHHHHHHHcCCCcEEEEeC-----------CcCCHHHHHHHHHHCCCeEEEEEeeee
Confidence 67999999872 12356789999999999998221 112567899999999999988877654
Q ss_pred cc
Q 024008 252 AI 253 (274)
Q Consensus 252 ~~ 253 (274)
..
T Consensus 170 ~~ 171 (226)
T 3m33_A 170 LA 171 (226)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 111
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.68 E-value=9.6e-16 Score=142.72 Aligned_cols=159 Identities=10% Similarity=0.109 Sum_probs=117.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC---CeEEEEeCChHHHHHHHHHhhc------CCCCcceEEEEcccCC-CCCCCCee
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPE---RYVVGLEISDIAIKKAEELSSS------LPNAKFVSFLKADFFT-WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~iD~s~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~-~~~~~~fD 176 (274)
.++.+|||+|||+|..+..+++.+ .+|+|+|+++.+++.|++++.. .+. .+++|+++|+.. ....++||
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~~d~sFD 798 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDSRLHDVD 798 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCTTSCSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCcccCCee
Confidence 367899999999999999999966 7999999999999999986542 222 479999999988 44558999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCC------------------------CCCCCCcccCHHHH
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISD------------------------HVGGPPYKVSVSDY 232 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~------------------------~~~~~~~~~~~~~~ 232 (274)
+|++..+++|++++....+++++.++|+|| .+++....... ......+..+.+++
T Consensus 799 lVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEF 877 (950)
T 3htx_A 799 IGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQF 877 (950)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHHHH
T ss_pred EEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcceeecHHHH
Confidence 999999999999877778999999999999 66665533210 00111233567777
Q ss_pred HH----HHhcCCCcEEEEeecccccCCccchhHHHHhhh
Q 024008 233 EE----VLQPMGFQAISIVDNKLAIGPRKGREKLGRWKR 267 (274)
Q Consensus 233 ~~----~~~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (274)
.. +++..||.+.-...-..+........++++|.|
T Consensus 878 r~Wae~LAer~GYsVefvGVGDg~ep~vG~~TQiAVFtR 916 (950)
T 3htx_A 878 NQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRR 916 (950)
T ss_dssp HHHHHHHHHHTTEEEEEEEESSCSSSTTCCSEEEEEEEE
T ss_pred HHHHHHHHHhcCcEEEEEccCCCCCCCCCCccEEEEEEE
Confidence 77 777889976544433222222233566777776
No 112
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.68 E-value=3.6e-16 Score=129.77 Aligned_cols=115 Identities=10% Similarity=0.018 Sum_probs=89.2
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC-CCCCCCCe
Q 024008 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF-TWCPTELF 175 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~f 175 (274)
+..++.... .++.+|||+|||+|..+..+++.+.+|+|+|+|+.+++.|+++..... ....+...+.. .....++|
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~~~~~~f 111 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPKELAGHF 111 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCGGGTTCC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccccccccCCCc
Confidence 344444443 455799999999999999999999999999999999999999986541 12233322220 11225689
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
|+|+++.+++++..+....++.++.++| |||++++....
T Consensus 112 D~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 112 DFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred cEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 9999999999998778888999999999 99999987643
No 113
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.68 E-value=3.2e-16 Score=123.10 Aligned_cols=124 Identities=12% Similarity=0.082 Sum_probs=103.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....+. .+++++.+|+.+..+.++||+|++..+ .
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~D~i~~~~~-~- 110 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVLDKLEFNKAFIGGT-K- 110 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHGGGCCCSEEEECSC-S-
T ss_pred CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccccccCCCCcEEEECCc-c-
Confidence 4567999999999999999999888999999999999999999987765 469999999987555578999999888 2
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
....++..+.++ |||.+++...... ...++.+.++++||.+..+...
T Consensus 111 ----~~~~~l~~~~~~--~gG~l~~~~~~~~----------~~~~~~~~l~~~g~~~~~~~~~ 157 (183)
T 2yxd_A 111 ----NIEKIIEILDKK--KINHIVANTIVLE----------NAAKIINEFESRGYNVDAVNVF 157 (183)
T ss_dssp ----CHHHHHHHHHHT--TCCEEEEEESCHH----------HHHHHHHHHHHTTCEEEEEEEE
T ss_pred ----cHHHHHHHHhhC--CCCEEEEEecccc----------cHHHHHHHHHHcCCeEEEEEee
Confidence 335678888888 9999999874332 4678999999999987776543
No 114
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.67 E-value=1.3e-15 Score=124.08 Aligned_cols=136 Identities=16% Similarity=0.134 Sum_probs=101.7
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----CCCCCCeeEE
Q 024008 106 ALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----WCPTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~fD~v 178 (274)
..++.+|||+|||+|..+..+++ +..+|+++|+++++++.+++++... .++..+.+|... ....+.+|+|
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccceEEEE
Confidence 45678999999999999999987 5679999999999999999988765 478899998876 2345789999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
++... +. ++...++.++.+.|||||++++...........++.. .-.+..+.++++||++++..+.
T Consensus 152 f~d~~--~~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~-~~~~ev~~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 152 YADVA--QP--EQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSE-VYKREIKTLMDGGLEIKDVVHL 217 (233)
T ss_dssp EECCC--CT--THHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCH-HHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEecc--CC--hhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHH-HHHHHHHHHHHCCCEEEEEEcc
Confidence 86432 22 3556789999999999999998753332111112211 2244567788899999887663
No 115
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.67 E-value=1.7e-15 Score=122.69 Aligned_cols=134 Identities=13% Similarity=-0.008 Sum_probs=108.6
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC-
Q 024008 97 IIVHLHQSGALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE- 173 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~- 173 (274)
.+..+... ..++.+|||||||+|..++.+++.+ .+|+++|+++.+++.|++++..+++.+++++..+|..+..+.+
T Consensus 5 RL~~l~~~-v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~ 83 (225)
T 3kr9_A 5 RLELVASF-VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETD 83 (225)
T ss_dssp HHHHHHTT-SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG
T ss_pred HHHHHHHh-CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCc
Confidence 34444443 3456799999999999999999854 4899999999999999999999998888999999998755444
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
+||+|+..+. ..+....+++.....|+++|++++... .....+.+++.++||.+++..
T Consensus 84 ~~D~IviaG~----Gg~~i~~Il~~~~~~L~~~~~lVlq~~------------~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 84 QVSVITIAGM----GGRLIARILEEGLGKLANVERLILQPN------------NREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp CCCEEEEEEE----CHHHHHHHHHHTGGGCTTCCEEEEEES------------SCHHHHHHHHHHTTEEEEEEE
T ss_pred CCCEEEEcCC----ChHHHHHHHHHHHHHhCCCCEEEEECC------------CCHHHHHHHHHHCCCEEEEEE
Confidence 6999986443 334567889999999999999888652 157899999999999988764
No 116
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.67 E-value=1.7e-15 Score=132.69 Aligned_cols=135 Identities=16% Similarity=0.134 Sum_probs=106.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-CCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-TELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+.+|+++|+++.+++.|++++..++. +++++.+|+.+... .++||+|+++.+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhccccCCCeEEEEECCchh
Confidence 3567999999999999999999889999999999999999999988764 38999999988544 47999999999988
Q ss_pred c---cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH------hcCCCcEEEEeecccc
Q 024008 186 A---IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL------QPMGFQAISIVDNKLA 252 (274)
Q Consensus 186 ~---~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Gf~~~~~~~~~~~ 252 (274)
+ ...+....++.++.++|+|||.++++..... + -...+.+.+ +..||++.....+..+
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l------~---~~~~l~~~f~~v~~l~~~gF~Vl~a~~~~~~ 376 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL------K---YEPLLEEKFGAFQTLKVAEYKVLFAEKRGRH 376 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS------C---HHHHHHHHHSCCEEEEESSSEEEEEECC---
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC------C---hHHHHHHhhccEEEEeCCCEEEEEEEEeccc
Confidence 7 3346678899999999999999999874321 1 122233322 6678888777665543
No 117
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.67 E-value=1.5e-15 Score=123.18 Aligned_cols=136 Identities=13% Similarity=0.021 Sum_probs=110.8
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 172 (274)
...+..+... ..++.+|||||||+|..++.+++.+ .+|+++|+++.+++.|++++..+++.+++++..+|..+...+
T Consensus 9 s~RL~~i~~~-v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 9 SKRLQKVANY-VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE 87 (230)
T ss_dssp CHHHHHHHTT-SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred HHHHHHHHHh-CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc
Confidence 4455555443 3456799999999999999999865 389999999999999999999999888999999999985544
Q ss_pred -CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 173 -ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 173 -~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
++||+|+..+. ..+....++....+.|+++|++++... ...+.+.+++.++||.+++..
T Consensus 88 ~~~~D~IviaGm----Gg~lI~~IL~~~~~~l~~~~~lIlqp~------------~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 88 ADNIDTITICGM----GGRLIADILNNDIDKLQHVKTLVLQPN------------NREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp GGCCCEEEEEEE----CHHHHHHHHHHTGGGGTTCCEEEEEES------------SCHHHHHHHHHHTTEEEEEEE
T ss_pred ccccCEEEEeCC----chHHHHHHHHHHHHHhCcCCEEEEECC------------CChHHHHHHHHHCCCEEEEEE
Confidence 37999885443 334567788999999999999888762 147899999999999988866
No 118
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.66 E-value=7.3e-16 Score=135.12 Aligned_cols=132 Identities=17% Similarity=0.244 Sum_probs=106.7
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
+..+|||+|||+|..+..+++ ++.+++++|+ +.+++.|++. ++++++.+|+++..+. ||+|++..+++
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~~~--~D~v~~~~~lh 278 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFASVPQ--GDAMILKAVCH 278 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCC--EEEEEEESSGG
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCcccCCCC--CCEEEEecccc
Confidence 457999999999999999987 5678999999 8888776541 4699999999874433 99999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC------------------CCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG------------------PPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
+++++....++++++++|+|||++++.++........ .....+.+++.++++++||+++++.
T Consensus 279 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 358 (372)
T 1fp1_D 279 NWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVA 358 (372)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 9987777799999999999999999986543322111 0123479999999999999999887
Q ss_pred ec
Q 024008 248 DN 249 (274)
Q Consensus 248 ~~ 249 (274)
..
T Consensus 359 ~~ 360 (372)
T 1fp1_D 359 CR 360 (372)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 119
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.66 E-value=2.8e-16 Score=130.15 Aligned_cols=130 Identities=15% Similarity=0.119 Sum_probs=104.1
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEec
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~~~ 181 (274)
++.+|||+|||+|..+..++. ++.+|+++|+++.+++.|+++....++. +++++.+|+.+... .++||+|++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEEEC
Confidence 457999999999999988876 5789999999999999999999887764 49999999987432 4789999987
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
.+- ....+++.+.++|+|||++++.... ...-...++.+.++..||.+..+.....+
T Consensus 159 a~~------~~~~ll~~~~~~LkpgG~l~~~~g~--------~~~~e~~~~~~~l~~~G~~~~~~~~~~~p 215 (249)
T 3g89_A 159 AVA------PLCVLSELLLPFLEVGGAAVAMKGP--------RVEEELAPLPPALERLGGRLGEVLALQLP 215 (249)
T ss_dssp SSC------CHHHHHHHHGGGEEEEEEEEEEECS--------CCHHHHTTHHHHHHHHTEEEEEEEEEECT
T ss_pred CcC------CHHHHHHHHHHHcCCCeEEEEEeCC--------CcHHHHHHHHHHHHHcCCeEEEEEEeeCC
Confidence 642 2357889999999999999887621 11223456777888899999998876444
No 120
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.66 E-value=7.9e-16 Score=125.97 Aligned_cols=133 Identities=19% Similarity=0.213 Sum_probs=99.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-C-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----CCCCCCeeEEEec
Q 024008 108 PKGRALVPGCGTGYDVVAMASP-E-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----WCPTELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~fD~v~~~ 181 (274)
++.+|||+|||+|..+..+++. + .+|+|+|+++.+++.++++.... .++.++.+|+.. ....+.||+|+.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~- 149 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIVEKVDVIYE- 149 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTSCCEEEEEE-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccCccEEEEEE-
Confidence 4579999999999999999874 3 69999999999999999997655 579999999986 333478999992
Q ss_pred cccccc-ChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 182 TFFCAI-EPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 182 ~~~~~~-~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
++ ++.....++.++.++|+|||++++...........++..+..+++. +++++||+++.+...
T Consensus 150 ----~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~ 213 (230)
T 1fbn_A 150 ----DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDI 213 (230)
T ss_dssp ----CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEEC
T ss_pred ----ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEcc
Confidence 22 2334567799999999999999987322111111111122346777 889999998887753
No 121
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.66 E-value=6.1e-16 Score=125.21 Aligned_cols=131 Identities=13% Similarity=0.039 Sum_probs=100.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEec
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~fD~v~~~ 181 (274)
.++.+|||+|||+|..+..+++ ++.+++|+|+++.+++.|++++...++ .++.++.+|+... .+++.||.|+++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 3467999999999999999987 578999999999999999999887765 4699999999872 456789999876
Q ss_pred ccccccChh------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 182 TFFCAIEPE------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 182 ~~~~~~~~~------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
....+.... ....+++.+.++|+|||.+++..... ...+++.+.++.+||....+..
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~----------~~~~~~~~~~~~~g~~~~~~~~ 178 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR----------GLFEYSLKSFSEYGLLLTYVSL 178 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH----------HHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCccccccc
Confidence 443221110 02578999999999999999876211 0235667788888998876543
No 122
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.66 E-value=5.5e-16 Score=134.89 Aligned_cols=131 Identities=14% Similarity=0.174 Sum_probs=107.0
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
+..+|||+|||+|..+..+++ ++.+++++|+ +.+++.|++. .+++++.+|+++..+ .||+|++..+++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~p--~~D~v~~~~~lh 257 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFTSIP--NADAVLLKYILH 257 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTTCCC--CCSEEEEESCGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccCCCC--CccEEEeehhhc
Confidence 457999999999999999987 5779999999 9988877642 359999999987444 399999999999
Q ss_pred ccChhHHHHHHHHHHhcccC---CcEEEEEEccCCCCCCC-----------------CCcccCHHHHHHHHhcCCCcEEE
Q 024008 186 AIEPEMRAAWAQKIKDFLKP---DGELITLMFPISDHVGG-----------------PPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~---gG~l~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
+++++....++++++++|+| ||++++.+......... .....+.+++.++++++||+.++
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 337 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYK 337 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeE
Confidence 99877777999999999999 99999987654322111 01235789999999999999988
Q ss_pred Eee
Q 024008 246 IVD 248 (274)
Q Consensus 246 ~~~ 248 (274)
+..
T Consensus 338 ~~~ 340 (352)
T 1fp2_A 338 ISP 340 (352)
T ss_dssp EEE
T ss_pred EEe
Confidence 876
No 123
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.65 E-value=1.7e-16 Score=141.20 Aligned_cols=147 Identities=17% Similarity=0.176 Sum_probs=108.9
Q ss_pred HHHHHhcCCC-CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceE-EEEcccCC-CCCCCC
Q 024008 98 IVHLHQSGAL-PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVS-FLKADFFT-WCPTEL 174 (274)
Q Consensus 98 ~~~~~~~~~~-~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~-~~~~d~~~-~~~~~~ 174 (274)
...++..... ++.+|||+|||+|.++..+++.+.+++|+|+++.+++.|+++. ...... +...+... ..++++
T Consensus 96 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~~~~~~~l~~~~~~ 171 (416)
T 4e2x_A 96 ARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKG----IRVRTDFFEKATADDVRRTEGP 171 (416)
T ss_dssp HHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTT----CCEECSCCSHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcC----CCcceeeechhhHhhcccCCCC
Confidence 3444444433 4579999999999999999999999999999999999998762 111111 22223222 233578
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCC--------C-CCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS--------D-HVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
||+|++.++++|++ +...+++++.++|+|||++++...... . ........++.+++.++++++||+++.
T Consensus 172 fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~ 249 (416)
T 4e2x_A 172 ANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVD 249 (416)
T ss_dssp EEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEE
T ss_pred EEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEE
Confidence 99999999999995 567899999999999999998764311 0 011223346899999999999999999
Q ss_pred Eeecc
Q 024008 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
+....
T Consensus 250 ~~~~~ 254 (416)
T 4e2x_A 250 VQRLP 254 (416)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 88854
No 124
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.65 E-value=1.3e-15 Score=120.86 Aligned_cols=108 Identities=11% Similarity=-0.044 Sum_probs=91.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEecc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~fD~v~~~~ 182 (274)
.++.+|||+|||+|..+..++..+. +|+++|+++.+++.|++++...+. ++++++++|+.+. .+.++||+|+++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 5678999999999999997777655 899999999999999999988766 5799999999873 3367899999998
Q ss_pred cccccChhHHHHHHHHHHh--cccCCcEEEEEEccC
Q 024008 183 FFCAIEPEMRAAWAQKIKD--FLKPDGELITLMFPI 216 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~~--~L~~gG~l~~~~~~~ 216 (274)
++++. .+....++..+.+ +|+|||++++.....
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 87754 3566788999999 999999999977543
No 125
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.65 E-value=1.7e-16 Score=129.62 Aligned_cols=146 Identities=13% Similarity=0.092 Sum_probs=97.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhh--CCCCeEEEEeCC-hHHHHHH---HHHhhcCCCCcceEEEEcccCCCCC--CCCeeE
Q 024008 106 ALPKGRALVPGCGTGYDVVAMA--SPERYVVGLEIS-DIAIKKA---EELSSSLPNAKFVSFLKADFFTWCP--TELFDL 177 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~--~~~~~v~~iD~s-~~~~~~a---~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~ 177 (274)
..++.+|||||||+|..+..++ .++.+|+|+|+| +.+++.| +++....++ .++.++.+|+..... .+.+|.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~~~~d~v~~ 100 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPFELKNIADS 100 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCGGGTTCEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhhhccCeEEE
Confidence 4567899999999999999998 477899999999 5566555 777766665 469999999987521 245666
Q ss_pred EEecccccccCh---hHHHHHHHHHHhcccCCcEEEEEEccCCCC------CCCCCcc----cCHHHHHHHHhcCCCcEE
Q 024008 178 IFDYTFFCAIEP---EMRAAWAQKIKDFLKPDGELITLMFPISDH------VGGPPYK----VSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 178 v~~~~~~~~~~~---~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~------~~~~~~~----~~~~~~~~~~~~~Gf~~~ 244 (274)
|+++..+..... .....++.++.++|||||.+++........ ..+.+.. +..+++.++++++||++.
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~ 180 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRID 180 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEE
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCee
Confidence 665544332100 011467899999999999998833111110 0111111 122248999999999999
Q ss_pred EEeecccc
Q 024008 245 SIVDNKLA 252 (274)
Q Consensus 245 ~~~~~~~~ 252 (274)
.+......
T Consensus 181 ~~~~~~~~ 188 (225)
T 3p2e_A 181 DVKELDNE 188 (225)
T ss_dssp EEEEECHH
T ss_pred eeeecCHH
Confidence 98876643
No 126
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.64 E-value=2.8e-15 Score=122.58 Aligned_cols=136 Identities=11% Similarity=0.011 Sum_probs=109.5
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 172 (274)
...+..+... ..++.+|||||||+|..++.+++.+ .+|+++|+++.+++.|++++..+++.+++++..+|..+...+
T Consensus 9 s~RL~~i~~~-v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 9 SKRLEKVASY-ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp CHHHHHHHTT-CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred hHHHHHHHHh-CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc
Confidence 4445555443 3456799999999999999999865 389999999999999999999999888899999999985554
Q ss_pred C-CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 173 E-LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 173 ~-~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
+ +||+|+..+. ..+....+++...+.|++++++++.-. ...+.+.+++.+.||.+++..
T Consensus 88 ~~~~D~Iviagm----Gg~lI~~IL~~~~~~L~~~~~lIlq~~------------~~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 88 KDAIDTIVIAGM----GGTLIRTILEEGAAKLAGVTKLILQPN------------IAAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp GGCCCEEEEEEE----CHHHHHHHHHHTGGGGTTCCEEEEEES------------SCHHHHHHHHHHHTEEEEEEE
T ss_pred cccccEEEEeCC----chHHHHHHHHHHHHHhCCCCEEEEEcC------------CChHHHHHHHHHCCCEEEEEE
Confidence 4 6999986433 334567788999999999999888752 147899999999999985544
No 127
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.64 E-value=6.5e-17 Score=130.41 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC-----CCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT-----ELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~fD~v~ 179 (274)
.++.+|||+|||+|..+..+++. +.+++|+|+++.+++.|+++....+. +++++.+|+.+..+. ++||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhhhhhhccCcccEEE
Confidence 45679999999999999999884 66999999999999999999887764 689999999874444 8999999
Q ss_pred ecccccccC------hhH------------------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHH
Q 024008 180 DYTFFCAIE------PEM------------------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEV 235 (274)
Q Consensus 180 ~~~~~~~~~------~~~------------------~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (274)
++.++.... +.. ...+++++.++|+|||++++...+. ...+++.++
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~~~~~~ 176 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH----------NQADEVARL 176 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT----------SCHHHHHHH
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC----------ccHHHHHHH
Confidence 987664321 111 1678899999999999955555332 257889999
Q ss_pred Hh--cCCCcEEEEee
Q 024008 236 LQ--PMGFQAISIVD 248 (274)
Q Consensus 236 ~~--~~Gf~~~~~~~ 248 (274)
++ ++||..+.+..
T Consensus 177 l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 177 FAPWRERGFRVRKVK 191 (215)
T ss_dssp TGGGGGGTEECCEEE
T ss_pred HHHhhcCCceEEEEE
Confidence 99 99997766554
No 128
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=2.5e-15 Score=125.35 Aligned_cols=130 Identities=18% Similarity=0.157 Sum_probs=101.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhc---CCCCcceEEEEcccCCC--------CCCC
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSS---LPNAKFVSFLKADFFTW--------CPTE 173 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~--------~~~~ 173 (274)
.++.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|++++.. .++.++++++.+|+.+. .+.+
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 3457999999999999999887 357999999999999999999988 77777899999999875 3467
Q ss_pred CeeEEEecccccccC----------------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHh
Q 024008 174 LFDLIFDYTFFCAIE----------------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~----------------~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (274)
+||+|+++.++.... ......+++.+.++|+|||.+++..... ...++.+.++
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------~~~~~~~~l~ 183 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ-----------SVAEIIAACG 183 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG-----------GHHHHHHHHT
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH-----------HHHHHHHHHH
Confidence 899999997665321 1125678999999999999998865221 4567888888
Q ss_pred cCCCcEEEEee
Q 024008 238 PMGFQAISIVD 248 (274)
Q Consensus 238 ~~Gf~~~~~~~ 248 (274)
.. |..+.+..
T Consensus 184 ~~-~~~~~i~~ 193 (260)
T 2ozv_A 184 SR-FGGLEITL 193 (260)
T ss_dssp TT-EEEEEEEE
T ss_pred hc-CCceEEEE
Confidence 74 77665554
No 129
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.63 E-value=6.5e-15 Score=124.16 Aligned_cols=135 Identities=10% Similarity=0.041 Sum_probs=99.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeC-ChHHHHHHHHHh-----hcCCCC----cceEEEEcccCCC---C--
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEI-SDIAIKKAEELS-----SSLPNA----KFVSFLKADFFTW---C-- 170 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~-s~~~~~~a~~~~-----~~~~~~----~~v~~~~~d~~~~---~-- 170 (274)
.++.+|||+|||+|..+..+++.+. +|+++|+ ++.+++.|+++. ...++. +++++...|..+. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 4567999999999999999988777 9999999 899999999998 444433 4688887665541 1
Q ss_pred --CCCCeeEEEecccccccChhHHHHHHHHHHhccc---C--CcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC-Cc
Q 024008 171 --PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLK---P--DGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG-FQ 242 (274)
Q Consensus 171 --~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~---~--gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-f~ 242 (274)
+.++||+|++..++++. +....+++.+.++|+ | ||.+++....... .......++.+.++++| |+
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~-----~~~~~~~~~~~~l~~~G~f~ 230 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVTFTHHRP-----HLAERDLAFFRLVNADGALI 230 (281)
T ss_dssp HHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-------------CTHHHHHHHHSTTEE
T ss_pred hccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeec-----ccchhHHHHHHHHHhcCCEE
Confidence 35789999998888875 456788999999999 9 9988775432211 11113467778899999 99
Q ss_pred EEEEee
Q 024008 243 AISIVD 248 (274)
Q Consensus 243 ~~~~~~ 248 (274)
+..+..
T Consensus 231 v~~~~~ 236 (281)
T 3bzb_A 231 AEPWLS 236 (281)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 988854
No 130
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.63 E-value=8.3e-16 Score=127.64 Aligned_cols=125 Identities=20% Similarity=0.112 Sum_probs=104.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|++++...++.++++++.+|+.+..+.++||+|++...
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~ 171 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDLP 171 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECSS
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECCC
Confidence 45679999999999999999874 779999999999999999999887776679999999998777788999997422
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC--CcEEEEee
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG--FQAISIVD 248 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--f~~~~~~~ 248 (274)
....+++++.++|+|||.+++..... ....++.+.++++| |..+.+.+
T Consensus 172 -------~~~~~l~~~~~~L~~gG~l~~~~~~~----------~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 172 -------QPERVVEHAAKALKPGGFFVAYTPCS----------NQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp -------CGGGGHHHHHHHEEEEEEEEEEESSH----------HHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred -------CHHHHHHHHHHHcCCCCEEEEEECCH----------HHHHHHHHHHHHcCCCccccEEEE
Confidence 22457899999999999999876322 24678889999999 98877665
No 131
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.62 E-value=4.9e-15 Score=119.34 Aligned_cols=101 Identities=23% Similarity=0.196 Sum_probs=87.8
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~ 184 (274)
..++.+|||+|||+|..+..+++.+.+|+++|+++.+++.|+++....+.. +++++.+|+.+ ....++||+|++..++
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQARAPFDAIIVTAAP 153 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEESSBC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccCCCccEEEEccch
Confidence 345689999999999999999988889999999999999999999877654 69999999987 3345789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
+++++ .+.++|+|||++++....
T Consensus 154 ~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 154 PEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred hhhhH--------HHHHhcccCcEEEEEEcC
Confidence 98863 578999999999998754
No 132
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.62 E-value=2.2e-15 Score=121.80 Aligned_cols=112 Identities=14% Similarity=0.094 Sum_probs=93.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..++ .+++++|+++. +++++.+|+.+ ..++++||+|++..+++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 126 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR---NPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLSLM 126 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESCCC
T ss_pred CCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehhcc
Confidence 456799999999999998883 69999999986 36788999987 34567899999999997
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
+ .+...++.++.++|+|||.+++.++... ..+.+++.++++++||+++....
T Consensus 127 ~---~~~~~~l~~~~~~L~~gG~l~i~~~~~~--------~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 127 G---TNIRDFLEEANRVLKPGGLLKVAEVSSR--------FEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp S---SCHHHHHHHHHHHEEEEEEEEEEECGGG--------CSCHHHHHHHHHHTTEEEEEEEC
T ss_pred c---cCHHHHHHHHHHhCCCCeEEEEEEcCCC--------CCCHHHHHHHHHHCCCEEEEEec
Confidence 4 3456889999999999999999875432 12789999999999999988654
No 133
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.61 E-value=1.3e-15 Score=127.99 Aligned_cols=124 Identities=18% Similarity=0.168 Sum_probs=102.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcC-CCCcceEEEEcccCCCCCCCCeeEEEecc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSL-PNAKFVSFLKADFFTWCPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 182 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++.... +. ++++++.+|+.+..++++||+|++.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~~fD~Vi~~- 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFISDQMYDAVIAD- 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCCSCCEEEEEEC-
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCcCCCccEEEEc-
Confidence 45579999999999999998874 789999999999999999998776 53 5799999999886666789999972
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
++ ....+++++.++|+|||++++..... ...+++.+.++++||..+++.+
T Consensus 187 ----~~--~~~~~l~~~~~~LkpgG~l~i~~~~~----------~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 187 ----IP--DPWNHVQKIASMMKPGSVATFYLPNF----------DQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp ----CS--CGGGSHHHHHHTEEEEEEEEEEESSH----------HHHHHHHHHSGGGTEEEEEEEE
T ss_pred ----Cc--CHHHHHHHHHHHcCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCeEEEEEE
Confidence 22 22467899999999999999987322 1356788889999999888776
No 134
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.61 E-value=2e-15 Score=123.80 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=97.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC----CCCCCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW----CPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~fD~v~ 179 (274)
.++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.+.++.... .+++++.+|+.+. ...++||+|+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVDVIF 152 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEEEEE
Confidence 34579999999999999999873 479999999999888887777654 4699999999873 2357899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
+..+ .++....++.++.++|+|||++++...........++...-..+ .++++++||+++....
T Consensus 153 ~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~~~~ 216 (233)
T 2ipx_A 153 ADVA----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQEQLT 216 (233)
T ss_dssp ECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEEEEE
T ss_pred EcCC----CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEEEEe
Confidence 8654 22444567889999999999999966442111111111111123 5889999999988655
No 135
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.61 E-value=4.1e-15 Score=123.93 Aligned_cols=143 Identities=20% Similarity=0.179 Sum_probs=107.8
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCee
Q 024008 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFD 176 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD 176 (274)
+..++.....++.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++.. . .++.+|+.. ..++++||
T Consensus 44 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~~~~~~fD 116 (260)
T 2avn_A 44 IGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLPFPSGAFE 116 (260)
T ss_dssp HHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCCSCTTCEE
T ss_pred HHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCCCCCCCEE
Confidence 344443332367899999999999999999999999999999999999998864 1 288899887 34567899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCC---------C--------CCC------C-----CcccC
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISD---------H--------VGG------P-----PYKVS 228 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~---------~--------~~~------~-----~~~~~ 228 (274)
+|++..++.++.++ ...+++++.++|+|||.+++...+... . ..+ . ...++
T Consensus 117 ~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (260)
T 2avn_A 117 AVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFK 195 (260)
T ss_dssp EEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBC
T ss_pred EEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccC
Confidence 99998877666333 678999999999999999987654320 0 000 0 01467
Q ss_pred HHHHHHHHhcCCCcEEEEeeccc
Q 024008 229 VSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 229 ~~~~~~~~~~~Gf~~~~~~~~~~ 251 (274)
.+++.++ +||+++.+.....
T Consensus 196 ~~~l~~l---aGf~~~~~~~~~~ 215 (260)
T 2avn_A 196 PEDLDSL---EGFETVDIRGIGV 215 (260)
T ss_dssp GGGGSSC---TTEEEEEEEEECS
T ss_pred HHHHHHh---cCceEEEEECCCC
Confidence 8888777 8999988876443
No 136
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.61 E-value=2.3e-15 Score=123.38 Aligned_cols=102 Identities=19% Similarity=0.200 Sum_probs=87.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC---CCCeeEEEec
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---TELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~fD~v~~~ 181 (274)
.++.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|++++...++.++++++.+|+.+..+ .++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 3568999999999999999998 6789999999999999999999888877789999999987543 6899999976
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.... ....+++.+.++|+|||++++..
T Consensus 150 ~~~~-----~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 150 AAKA-----QSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TTSS-----SHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CcHH-----HHHHHHHHHHHhcCCCeEEEEee
Confidence 4432 34578999999999999998844
No 137
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.61 E-value=1.1e-14 Score=118.67 Aligned_cols=133 Identities=17% Similarity=0.178 Sum_probs=98.7
Q ss_pred CCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC----CCCCCeeEEEe
Q 024008 108 PKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW----CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~fD~v~~ 180 (274)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++... .+++++.+|+... ...++||+|++
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceEEEE
Confidence 4579999999999999999863 479999999999999999988765 5799999999872 22468999997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
..+ .+.....++.++.++|+|||.+++...........++..+..+++.++ .++ |++++....
T Consensus 150 ~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~ 212 (227)
T 1g8a_A 150 DVA----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNL 212 (227)
T ss_dssp CCC----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEEC
T ss_pred CCC----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEecc
Confidence 654 223444568999999999999998732222111112223445677776 777 998877664
No 138
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=6.5e-15 Score=128.92 Aligned_cols=120 Identities=15% Similarity=0.117 Sum_probs=94.7
Q ss_pred cHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCc--ceEEEEcccCCC
Q 024008 95 APIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAK--FVSFLKADFFTW 169 (274)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~--~v~~~~~d~~~~ 169 (274)
......++.... .++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++...+++.+ +++|..+|+.+.
T Consensus 208 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~ 287 (375)
T 4dcm_A 208 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 287 (375)
T ss_dssp CHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT
T ss_pred cHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc
Confidence 333333444443 33479999999999999999884 7899999999999999999998776532 588899999987
Q ss_pred CCCCCeeEEEecccccc---cChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 170 CPTELFDLIFDYTFFCA---IEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 170 ~~~~~fD~v~~~~~~~~---~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.+.++||+|+++.++++ +.......++.++.++|+|||+++++..
T Consensus 288 ~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 288 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 77789999999999875 3334456789999999999999999763
No 139
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.61 E-value=1.8e-15 Score=121.35 Aligned_cols=106 Identities=14% Similarity=0.148 Sum_probs=87.2
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCC-cceEEEEcccCCCC---CCCC-eeEEEec
Q 024008 108 PKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNA-KFVSFLKADFFTWC---PTEL-FDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~---~~~~-fD~v~~~ 181 (274)
++.+|||+|||+|..+..++..+. +|+++|+++.+++.|++++...+.. ++++++.+|+.+.. +.++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 567999999999999998776664 8999999999999999999887764 57999999987632 2468 9999998
Q ss_pred ccccccChhHHHHHHHHH--HhcccCCcEEEEEEccC
Q 024008 182 TFFCAIEPEMRAAWAQKI--KDFLKPDGELITLMFPI 216 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l--~~~L~~gG~l~~~~~~~ 216 (274)
.+++ . .....++..+ .++|+|||.+++.....
T Consensus 133 ~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8855 2 3556778888 67899999999877544
No 140
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.61 E-value=2.3e-14 Score=116.88 Aligned_cols=136 Identities=18% Similarity=0.159 Sum_probs=93.9
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC----CCCCeeEE
Q 024008 106 ALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----PTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~fD~v 178 (274)
..++.+|||+|||+|..+..+++ +..+|+++|+++.++....+..... .++.++.+|+..+. ..++||+|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D~I 150 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVDVL 150 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceEEE
Confidence 34568999999999999988887 4569999999998875554444332 46999999997632 24689999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
++..+. ++....+...+.+.|+|||++++............+.. ..++..+.++++||++++....
T Consensus 151 ~~d~a~----~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e-~~~~~~~~L~~~gf~~~~~~~l 216 (232)
T 3id6_C 151 YVDIAQ----PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKE-IYKTEVEKLENSNFETIQIINL 216 (232)
T ss_dssp EECCCC----TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSS-STTHHHHHHHHTTEEEEEEEEC
T ss_pred EecCCC----hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHH-HHHHHHHHHHHCCCEEEEEecc
Confidence 987554 23434455666779999999999865443222222222 2245667788889999887764
No 141
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.60 E-value=5.2e-15 Score=126.11 Aligned_cols=139 Identities=14% Similarity=0.105 Sum_probs=101.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhc---CCCCcceEEEEcccCCCC---CCCCeeEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSS---LPNAKFVSFLKADFFTWC---PTELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~---~~~~~~v~~~~~d~~~~~---~~~~fD~v 178 (274)
.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.|+++++. ....++++++.+|+.+.. +.++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 34579999999999999999874 56999999999999999998742 112357999999998732 46789999
Q ss_pred EecccccccChhHH--HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024008 179 FDYTFFCAIEPEMR--AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 179 ~~~~~~~~~~~~~~--~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~ 251 (274)
++.......+...+ ..+++.+.++|+|||++++...+... ......++.+.++++||..+.+.....
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~------~~~~~~~~~~~l~~~GF~~v~~~~~~v 242 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL------DLELIEKMSRFIRETGFASVQYALMHV 242 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT------CHHHHHHHHHHHHHHTCSEEEEEECCC
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc------chHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 99765543322222 57899999999999999987532210 112467888999999999887765433
No 142
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.60 E-value=4.2e-15 Score=119.99 Aligned_cols=131 Identities=19% Similarity=0.125 Sum_probs=93.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC----CCCCCeeEEEe
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW----CPTELFDLIFD 180 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~fD~v~~ 180 (274)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+.+..... .++.++.+|+... ...++||+|++
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 132 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDLIYQ 132 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeEEEE
Confidence 35679999999999999988873 369999999999877666655433 3688899998763 23478999998
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHH----HHHhcCCCcEEEEeecc
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYE----EVLQPMGFQAISIVDNK 250 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~Gf~~~~~~~~~ 250 (274)
... .+.....++.++.++|||||++++....... ....+.+++. +.++++ |++++.....
T Consensus 133 ~~~----~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~ 196 (210)
T 1nt2_A 133 DIA----QKNQIEILKANAEFFLKEKGEVVIMVKARSI-----DSTAEPEEVFKSVLKEMEGD-FKIVKHGSLM 196 (210)
T ss_dssp CCC----STTHHHHHHHHHHHHEEEEEEEEEEEEHHHH-----CTTSCHHHHHHHHHHHHHTT-SEEEEEEECT
T ss_pred ecc----ChhHHHHHHHHHHHHhCCCCEEEEEEecCCc-----cccCCHHHHHHHHHHHHHhh-cEEeeeecCC
Confidence 731 2234456689999999999999988533210 0112344442 337888 9998887753
No 143
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.60 E-value=5.8e-15 Score=128.74 Aligned_cols=131 Identities=15% Similarity=0.189 Sum_probs=106.1
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
+..+|||||||+|..+..+++ ++.+++++|+ +.+++.+++ . .+++++.+|+++..+ .||+|++..+++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~---~~v~~~~~d~~~~~~--~~D~v~~~~vlh 262 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----N---ENLNFVGGDMFKSIP--SADAVLLKWVLH 262 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----C---SSEEEEECCTTTCCC--CCSEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----C---CCcEEEeCccCCCCC--CceEEEEccccc
Confidence 347999999999999999987 5679999999 788876653 1 359999999987433 499999999999
Q ss_pred ccChhHHHHHHHHHHhcccC---CcEEEEEEccCCCCCCC------------------CCcccCHHHHHHHHhcCCCcEE
Q 024008 186 AIEPEMRAAWAQKIKDFLKP---DGELITLMFPISDHVGG------------------PPYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~---gG~l~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~Gf~~~ 244 (274)
+++++....+++++.++|+| ||++++.++........ .....+.+++.++++++||+++
T Consensus 263 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 342 (358)
T 1zg3_A 263 DWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSY 342 (358)
T ss_dssp GSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCee
Confidence 99877777999999999999 99999987654332211 0112489999999999999999
Q ss_pred EEee
Q 024008 245 SIVD 248 (274)
Q Consensus 245 ~~~~ 248 (274)
++..
T Consensus 343 ~~~~ 346 (358)
T 1zg3_A 343 KITP 346 (358)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8876
No 144
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.60 E-value=3.4e-15 Score=124.90 Aligned_cols=137 Identities=20% Similarity=0.248 Sum_probs=97.9
Q ss_pred cccchhHhhhc---CCCCcc-CCCccHHHHH-HHhcCCCCCCeEEEEcCCcch----hHHHhhC--C----CCeEEEEeC
Q 024008 74 SSGGWEKCWEE---GLTPWD-IGQPAPIIVH-LHQSGALPKGRALVPGCGTGY----DVVAMAS--P----ERYVVGLEI 138 (274)
Q Consensus 74 ~~~~w~~~~~~---~~~~~~-~~~~~~~~~~-~~~~~~~~~~~vLDiG~G~G~----~~~~l~~--~----~~~v~~iD~ 138 (274)
....|...+.. +.+.|. .......+.. ++.. .++.+|+|+|||||. .++.+++ . +++|+|+|+
T Consensus 68 ~~~e~~~l~~~lt~~~t~FfRd~~~f~~l~~~llp~--~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDi 145 (274)
T 1af7_A 68 NSAEWQAFINALTTNLTAFFREAHHFPILAEHARRR--HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDI 145 (274)
T ss_dssp TCTHHHHHHHHHCCCCCCTTTTTTHHHHHHHHHHHS--CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEES
T ss_pred CHHHHHHHHHHHhhcCccccCChHHHHHHHHHccCC--CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEEC
Confidence 45566665554 233222 1222333333 3443 234699999999998 4444544 2 469999999
Q ss_pred ChHHHHHHHHHhhc-----------------------CC-------CCcceEEEEcccCCC-CC-CCCeeEEEecccccc
Q 024008 139 SDIAIKKAEELSSS-----------------------LP-------NAKFVSFLKADFFTW-CP-TELFDLIFDYTFFCA 186 (274)
Q Consensus 139 s~~~~~~a~~~~~~-----------------------~~-------~~~~v~~~~~d~~~~-~~-~~~fD~v~~~~~~~~ 186 (274)
|+.+++.|+++... .+ +..+|.|.++|+.+. .+ .++||+|+|.++++|
T Consensus 146 s~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliy 225 (274)
T 1af7_A 146 DTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIY 225 (274)
T ss_dssp CHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGG
T ss_pred CHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHh
Confidence 99999999987521 00 013699999999883 33 478999999999999
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEE
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~ 212 (274)
++++....++.+++++|+|||++++.
T Consensus 226 f~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 226 FDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp SCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 99888899999999999999999874
No 145
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.60 E-value=6.3e-15 Score=126.91 Aligned_cols=134 Identities=14% Similarity=0.034 Sum_probs=101.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCc-ceEEEEcccCCCCC-----CCCeeEEEec
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAK-FVSFLKADFFTWCP-----TELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~-----~~~fD~v~~~ 181 (274)
++.+|||+|||+|..+..+++.+++|+++|+|+.+++.|++++..+++.+ +++++.+|+.+..+ .++||+|++.
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 45799999999999999999988899999999999999999998877655 59999999987432 4689999997
Q ss_pred ccccccC--------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH----hcCCCcEEEEeec
Q 024008 182 TFFCAIE--------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL----QPMGFQAISIVDN 249 (274)
Q Consensus 182 ~~~~~~~--------~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Gf~~~~~~~~ 249 (274)
....... ......++..+.++|+|||.+++...... ..+.+.+.+++ ..+|+.+. ..+.
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~--------~~~~~~~~~~l~~a~~~~g~~v~-~~e~ 303 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSI--------RASFYSMHELMRETMRGAGGVVA-SGEL 303 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT--------TSCHHHHHHHHHHHTTTSCSEEE-EEEE
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC--------CCCHHHHHHHHHHHHHHcCCeEE-EEEE
Confidence 6532211 13557889999999999999777653321 12444544444 47898876 4443
Q ss_pred c
Q 024008 250 K 250 (274)
Q Consensus 250 ~ 250 (274)
.
T Consensus 304 ~ 304 (332)
T 2igt_A 304 V 304 (332)
T ss_dssp E
T ss_pred e
Confidence 3
No 146
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.60 E-value=6.7e-15 Score=122.09 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=102.0
Q ss_pred CeEEEEcCCc--chhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----C--CCCee-
Q 024008 110 GRALVPGCGT--GYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----P--TELFD- 176 (274)
Q Consensus 110 ~~vLDiG~G~--G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~--~~~fD- 176 (274)
.+|||+|||+ +.++..+++ ++.+|+++|.|+.+++.|+.++...+ ..+++|+++|+.++. + .+.||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhcccccccccCc
Confidence 6899999997 444444433 78899999999999999999987643 247999999998731 1 23455
Q ss_pred ----EEEecccccccChhH-HHHHHHHHHhcccCCcEEEEEEccCCCC------------CCCCC-cccCHHHHHHHHhc
Q 024008 177 ----LIFDYTFFCAIEPEM-RAAWAQKIKDFLKPDGELITLMFPISDH------------VGGPP-YKVSVSDYEEVLQP 238 (274)
Q Consensus 177 ----~v~~~~~~~~~~~~~-~~~~l~~l~~~L~~gG~l~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~ 238 (274)
.|+++.++|++++.. ...++.++.+.|+|||+|++........ ..+.+ ...+.+++..+|.
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~- 237 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE- 237 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT-
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC-
Confidence 688999999998754 5789999999999999999988765421 12223 3468999999995
Q ss_pred CCCcEEE
Q 024008 239 MGFQAIS 245 (274)
Q Consensus 239 ~Gf~~~~ 245 (274)
||++++
T Consensus 238 -Glelve 243 (277)
T 3giw_A 238 -GLELVE 243 (277)
T ss_dssp -TSEECT
T ss_pred -CCcccC
Confidence 998643
No 147
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.60 E-value=1.1e-15 Score=128.41 Aligned_cols=159 Identities=11% Similarity=0.030 Sum_probs=109.5
Q ss_pred HHHHHHhcC--CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEE-EEcccCCC---
Q 024008 97 IIVHLHQSG--ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSF-LKADFFTW--- 169 (274)
Q Consensus 97 ~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~~--- 169 (274)
.+...+... ..++.+|||+|||||.++..+++.++ +|+|+|+++.+++.+.++. .++.. ...|+...
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecchh
Confidence 344555443 23457999999999999999988775 9999999999998865432 22322 22343321
Q ss_pred -CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC---C---CCC---C--cccCHHHHHHHHh
Q 024008 170 -CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH---V---GGP---P--YKVSVSDYEEVLQ 237 (274)
Q Consensus 170 -~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~---~---~~~---~--~~~~~~~~~~~~~ 237 (274)
.+...||+|++..+|+++ ..++.++.++|+|||.+++...+.... . .|. + +....+++.++++
T Consensus 146 ~l~~~~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~ 220 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL-----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAV 220 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHH
Confidence 233459999998888765 467899999999999999874322111 1 121 0 1246888999999
Q ss_pred cCCCcEEEEeecccccCCccchhHHHHhhhh
Q 024008 238 PMGFQAISIVDNKLAIGPRKGREKLGRWKRS 268 (274)
Q Consensus 238 ~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (274)
++||.+..+... ++.+..++.++..|.+.
T Consensus 221 ~~Gf~v~~~~~s--pi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 221 DYGFSVKGLDFS--PIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp HTTEEEEEEEEC--SSCCGGGCCCEEEEEEE
T ss_pred HCCCEEEEEEEC--CCCCCCcCHHHHHHhhh
Confidence 999999888774 44455566666666554
No 148
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.59 E-value=4.7e-15 Score=117.02 Aligned_cols=107 Identities=17% Similarity=0.089 Sum_probs=86.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----CCCeeEEEe
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----TELFDLIFD 180 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD~v~~ 180 (274)
.++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.|+++....++.++++++.+|+.+..+ .++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 356899999999999999887755 59999999999999999999877665689999999977322 578999999
Q ss_pred cccccccChhHHHHHHHHH--HhcccCCcEEEEEEccC
Q 024008 181 YTFFCAIEPEMRAAWAQKI--KDFLKPDGELITLMFPI 216 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l--~~~L~~gG~l~~~~~~~ 216 (274)
+.+++... ....+..+ .++|+|||.+++.....
T Consensus 123 ~~~~~~~~---~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 123 DPPYAKQE---IVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CCCGGGCC---HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCCchh---HHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 88865322 23455666 88999999999876443
No 149
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.59 E-value=3.1e-15 Score=121.41 Aligned_cols=105 Identities=17% Similarity=0.161 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC----CCCCCeeEEEec
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW----CPTELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~~fD~v~~~ 181 (274)
++.+|||||||+|..+..+++ ++..|+|+|+++.+++.|++++...++. ++.++.+|+.+. .++++||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 567999999999999999987 5679999999999999999998877664 699999998773 567899999987
Q ss_pred ccccccChhHH------HHHHHHHHhcccCCcEEEEEE
Q 024008 182 TFFCAIEPEMR------AAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 182 ~~~~~~~~~~~------~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.+..+...... ..+++.+.++|+|||.+++..
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 44332211111 258999999999999999876
No 150
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.58 E-value=5.7e-15 Score=128.28 Aligned_cols=104 Identities=21% Similarity=0.231 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|+++....++.++++++.+|+.+. .+.++||+|++..+.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 3568999999999999999998766 999999995 9999999999888878899999999984 556899999998765
Q ss_pred ccc-ChhHHHHHHHHHHhcccCCcEEEE
Q 024008 185 CAI-EPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 185 ~~~-~~~~~~~~l~~l~~~L~~gG~l~~ 211 (274)
+.+ .......++..+.++|+|||+++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 444 234567889999999999999873
No 151
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.58 E-value=5.2e-15 Score=115.92 Aligned_cols=107 Identities=19% Similarity=0.114 Sum_probs=87.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCCCCeeEEEeccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++.+ .+++++|+++.+++.|+++....++.++++++.+|+.+. ...++||+|++..+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 456799999999999999888865 599999999999999999998887767899999999772 23467999999877
Q ss_pred ccccChhHHHHHHHHHH--hcccCCcEEEEEEccC
Q 024008 184 FCAIEPEMRAAWAQKIK--DFLKPDGELITLMFPI 216 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~--~~L~~gG~l~~~~~~~ 216 (274)
++. .....++..+. ++|+|||.+++.....
T Consensus 110 ~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 110 YAK---ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCc---chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 642 34456667776 9999999999877544
No 152
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.58 E-value=3.5e-15 Score=123.60 Aligned_cols=107 Identities=14% Similarity=0.110 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCcchhHHHhhCC----CCeEEEEeCChHHHHHHHHHhhcC---CCCcc----------------------
Q 024008 108 PKGRALVPGCGTGYDVVAMASP----ERYVVGLEISDIAIKKAEELSSSL---PNAKF---------------------- 158 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~----~~~v~~iD~s~~~~~~a~~~~~~~---~~~~~---------------------- 158 (274)
++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|++++... ++.++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4579999999999999988764 569999999999999999887665 33222
Q ss_pred ---eE-------------EEEcccCCCC------CCCCeeEEEecccccccCh-------hHHHHHHHHHHhcccCCcEE
Q 024008 159 ---VS-------------FLKADFFTWC------PTELFDLIFDYTFFCAIEP-------EMRAAWAQKIKDFLKPDGEL 209 (274)
Q Consensus 159 ---v~-------------~~~~d~~~~~------~~~~fD~v~~~~~~~~~~~-------~~~~~~l~~l~~~L~~gG~l 209 (274)
++ |..+|+.+.. ..++||+|+++.++.+... +....++.++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 66 9999998854 3458999999988766532 55678999999999999999
Q ss_pred EEEEc
Q 024008 210 ITLMF 214 (274)
Q Consensus 210 ~~~~~ 214 (274)
++...
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 98553
No 153
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.58 E-value=3.5e-15 Score=115.98 Aligned_cols=103 Identities=18% Similarity=0.125 Sum_probs=83.7
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----CCCeeEEEecc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----TELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD~v~~~~ 182 (274)
++.+|||+|||+|..+..+++.+.+++|+|+++.+++.|+++....+. +++++.+|+.+..+ .++||+|+++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 568999999999999999999888899999999999999999887654 69999999876321 24799999998
Q ss_pred cccccChhHHHHHHHHHH--hcccCCcEEEEEEccC
Q 024008 183 FFCAIEPEMRAAWAQKIK--DFLKPDGELITLMFPI 216 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~--~~L~~gG~l~~~~~~~ 216 (274)
+++ -.. ..+++.+. ++|+|||.+++.....
T Consensus 119 ~~~-~~~---~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 119 PYA-MDL---AALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CTT-SCT---THHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCc-hhH---HHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 775 211 23445555 9999999999877544
No 154
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.58 E-value=5.7e-15 Score=119.66 Aligned_cols=142 Identities=12% Similarity=0.051 Sum_probs=96.9
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHH----hhcCCCCcceEEEEcccCCCC-CCCCeeEE
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEEL----SSSLPNAKFVSFLKADFFTWC-PTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~----~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v 178 (274)
..++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.+.+. ....+. ++++++++|+.+.. +.+. |.|
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-EEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-CEE
Confidence 345679999999999999999884 78999999999988864333 223333 47999999998843 3344 777
Q ss_pred Eeccccc-----ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----CCCCCcc---cCHHHHHHHHhcCCCcEEE
Q 024008 179 FDYTFFC-----AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----VGGPPYK---VSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 179 ~~~~~~~-----~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~Gf~~~~ 245 (274)
+....+. +++ +...+++++.++|+|||.+++........ ....+.. ...+++.++++++||++..
T Consensus 103 ~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EEESCCHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EEEccchhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 6333222 221 12678999999999999999854322111 1111111 1244578899999999999
Q ss_pred Eeeccc
Q 024008 246 IVDNKL 251 (274)
Q Consensus 246 ~~~~~~ 251 (274)
+.....
T Consensus 181 ~~~~~~ 186 (218)
T 3mq2_A 181 CRYLEP 186 (218)
T ss_dssp EEEECH
T ss_pred eeccch
Confidence 887553
No 155
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.58 E-value=9.9e-15 Score=126.74 Aligned_cols=105 Identities=20% Similarity=0.193 Sum_probs=90.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+. +|+|+|+++ +++.|++++..+++.++++++.+|+.+...+++||+|++..+++
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBT
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchh
Confidence 4668999999999999999988765 999999997 88999999988887778999999998855457899999998888
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEE
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~ 212 (274)
++..+.....+.++.++|+|||.+++.
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 776555566778899999999999853
No 156
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.58 E-value=8e-15 Score=123.31 Aligned_cols=125 Identities=19% Similarity=0.115 Sum_probs=102.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++....++.++++++.+|+.+..+.++||+|++...
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~~ 190 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVP 190 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECCS
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECCc
Confidence 45679999999999999988874 679999999999999999999887765689999999988766678999997421
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
....++..+.++|+|||.+++..... ....++.+.++++||..+++.+
T Consensus 191 -------~~~~~l~~~~~~L~pgG~l~~~~~~~----------~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 191 -------DPWNYIDKCWEALKGGGRFATVCPTT----------NQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp -------CGGGTHHHHHHHEEEEEEEEEEESSH----------HHHHHHHHHHHHSSEEEEEEEC
T ss_pred -------CHHHHHHHHHHHcCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCceeEEEE
Confidence 22467899999999999999987321 1356778888889998877665
No 157
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.57 E-value=1.7e-16 Score=130.71 Aligned_cols=136 Identities=18% Similarity=0.196 Sum_probs=105.5
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAI 187 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~ 187 (274)
++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.|++++...++.++++++.+|+.+..+.++||+|+++.++++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGP 157 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSSG
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCCc
Confidence 67899999999999999999989999999999999999999998887766899999999886667899999999999886
Q ss_pred ChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--CCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 188 EPEMRAAWAQKIKDFLKPDGELITLMFPISDH--VGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 188 ~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
+.. ...+.++.++|+|||.+++........ ....+.....+++..++...|...+.
T Consensus 158 ~~~--~~~~~~~~~~L~pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~ 215 (241)
T 3gdh_A 158 DYA--TAETFDIRTMMSPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIE 215 (241)
T ss_dssp GGG--GSSSBCTTTSCSSCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEE
T ss_pred chh--hhHHHHHHhhcCCcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEE
Confidence 432 235667899999999966543211100 00011224678888888887755444
No 158
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.57 E-value=9.2e-15 Score=121.35 Aligned_cols=124 Identities=19% Similarity=0.155 Sum_probs=100.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcC-CCCcceEEEEcccCCC-CCCCCeeEEEec
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSL-PNAKFVSFLKADFFTW-CPTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~~-~~~~~fD~v~~~ 181 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++.... + .+++++..+|+.+. .+.++||+|++.
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEEAAYDGVALD 173 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCTTCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCCCCcCEEEEC
Confidence 45679999999999999998874 679999999999999999998665 4 35799999999885 566789999973
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.+ ....+++++.++|+|||.+++..... ....++.+.++++||..+.+.+
T Consensus 174 -----~~--~~~~~l~~~~~~L~~gG~l~~~~~~~----------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 174 -----LM--EPWKVLEKAALALKPDRFLVAYLPNI----------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp -----SS--CGGGGHHHHHHHEEEEEEEEEEESCH----------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred -----Cc--CHHHHHHHHHHhCCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCceEEEEE
Confidence 22 22367899999999999999987322 1356778888999999877765
No 159
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.57 E-value=1.6e-14 Score=118.01 Aligned_cols=106 Identities=19% Similarity=0.130 Sum_probs=88.3
Q ss_pred HHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeE
Q 024008 100 HLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDL 177 (274)
Q Consensus 100 ~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~ 177 (274)
.++... ..++.+|||+|||+|..+..+++.+.+|+++|+++.+++.++++....+ +++++.+|+.. ....++||+
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~fD~ 137 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEEKPYDR 137 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGGCCEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccCCCccE
Confidence 344433 3456799999999999999999877899999999999999999987664 69999999987 334578999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~ 216 (274)
|++..+++++. +.+.++|+|||++++.....
T Consensus 138 v~~~~~~~~~~--------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 138 VVVWATAPTLL--------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp EEESSBBSSCC--------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH--------HHHHHHcCCCcEEEEEEcCC
Confidence 99999999885 35888999999999987543
No 160
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.57 E-value=6.6e-15 Score=119.69 Aligned_cols=127 Identities=15% Similarity=0.161 Sum_probs=95.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CC----CCCee
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CP----TELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~----~~~fD 176 (274)
.++.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|++++...++.++++++.+|+.+. .. .++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 3568999999999999999988 37899999999999999999998887777899999998652 11 16899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC-CcEEEE
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG-FQAISI 246 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-f~~~~~ 246 (274)
+|++....++.. ....++..+ ++|+|||++++.+.... ...++.+.+.... |....+
T Consensus 137 ~V~~d~~~~~~~--~~~~~~~~~-~~LkpgG~lv~~~~~~~----------~~~~~~~~l~~~~~~~~~~~ 194 (221)
T 3u81_A 137 MVFLDHWKDRYL--PDTLLLEKC-GLLRKGTVLLADNVIVP----------GTPDFLAYVRGSSSFECTHY 194 (221)
T ss_dssp EEEECSCGGGHH--HHHHHHHHT-TCCCTTCEEEESCCCCC----------CCHHHHHHHHHCTTEEEEEE
T ss_pred EEEEcCCcccch--HHHHHHHhc-cccCCCeEEEEeCCCCc----------chHHHHHHHhhCCCceEEEc
Confidence 999887666542 233556666 99999999988553211 2245555665544 554444
No 161
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.57 E-value=1.1e-14 Score=127.76 Aligned_cols=106 Identities=17% Similarity=0.126 Sum_probs=91.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++.|. +|+|+|++ .+++.|++++..+++.++++++.+|+.+...+++||+|++..+.+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGY 140 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCBT
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChhh
Confidence 4568999999999999999999887 99999999 999999999998888888999999998855458999999977655
Q ss_pred ccCh-hHHHHHHHHHHhcccCCcEEEEEE
Q 024008 186 AIEP-EMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 186 ~~~~-~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.+.. .....++..+.++|+|||+++...
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 5532 456788999999999999997643
No 162
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.57 E-value=5.2e-14 Score=113.02 Aligned_cols=130 Identities=13% Similarity=0.074 Sum_probs=101.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+. +++|+|+++.+++.++++....+. +++++.+|+.+.. ++||+|+++.+++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--SRVDIVIMNPPFG 123 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC--CCCSEEEECCCCS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC--CCCCEEEEcCCCc
Confidence 4568999999999999999988765 799999999999999999987764 6999999998753 5899999999888
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
.........+++.+.+.+ |+ +++..... ..+.+.+.+.+++.||++..+......
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~-~~~~~~~~---------~~~~~~~~~~l~~~g~~~~~~~~~~~~ 178 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DV-VYSIHLAK---------PEVRRFIEKFSWEHGFVVTHRLTTKIE 178 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SE-EEEEEECC---------HHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCchHHHHHHHHHhc--Cc-EEEEEeCC---------cCCHHHHHHHHHHCCCeEEEEEEEecC
Confidence 765444456788888888 44 44433111 114667888899999998877765443
No 163
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.57 E-value=9.5e-15 Score=127.16 Aligned_cols=104 Identities=22% Similarity=0.136 Sum_probs=89.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||||||+|.+++.+++.|+ +|++||.++ +++.|++++..+++.++|+++.+|+.+...+++||+|++-..-.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGY 160 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBT
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccc
Confidence 3578999999999999999999887 899999986 88999999999999999999999999876668999999865443
Q ss_pred cc-ChhHHHHHHHHHHhcccCCcEEEE
Q 024008 186 AI-EPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 186 ~~-~~~~~~~~l~~l~~~L~~gG~l~~ 211 (274)
.+ ....+..++....++|+|||.++-
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 33 334677888999999999999873
No 164
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.57 E-value=2.2e-14 Score=119.99 Aligned_cols=133 Identities=12% Similarity=0.030 Sum_probs=106.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
..++.+|||+|||+|.+++.+++.| .+|+++|++|.+++.+++|+..+++.++++++.+|..+..+.+.||.|+++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~ 202 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCC
Confidence 4567899999999999999988865 599999999999999999999999989999999999988778899999976543
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.. ..++....++|++||++.+..+....... .-..+.+.++++..|+.+..+..
T Consensus 203 ~~------~~~l~~a~~~lk~gG~ih~~~~~~e~~~~----~~~~e~i~~~~~~~g~~v~~~~~ 256 (278)
T 3k6r_A 203 RT------HEFIPKALSIAKDGAIIHYHNTVPEKLMP----REPFETFKRITKEYGYDVEKLNE 256 (278)
T ss_dssp SG------GGGHHHHHHHEEEEEEEEEEEEEEGGGTT----TTTHHHHHHHHHHTTCEEEEEEE
T ss_pred cH------HHHHHHHHHHcCCCCEEEEEeeecccccc----hhHHHHHHHHHHHcCCcEEEEEE
Confidence 32 24567788999999998876654432211 12457788889999998765543
No 165
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.56 E-value=1.7e-14 Score=124.80 Aligned_cols=103 Identities=18% Similarity=0.210 Sum_probs=87.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|++++..+++.++++++.+|+.+. .+.++||+|++..+.
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 4567999999999999999998776 999999997 9999999998888777899999999884 445789999998743
Q ss_pred ccc-ChhHHHHHHHHHHhcccCCcEEE
Q 024008 185 CAI-EPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 185 ~~~-~~~~~~~~l~~l~~~L~~gG~l~ 210 (274)
..+ .......++..+.++|+|||.++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 332 23466789999999999999987
No 166
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.56 E-value=9.4e-15 Score=117.20 Aligned_cols=105 Identities=10% Similarity=-0.003 Sum_probs=85.5
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC--CCCCCCeeEEEecccc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT--WCPTELFDLIFDYTFF 184 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~fD~v~~~~~~ 184 (274)
++.+|||+|||+|..+..++..+. +|+++|+++.+++.|+++....+. ++++++.+|+.+ ....++||+|++..++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 567999999999999998777664 999999999999999999988776 579999999877 2345689999998775
Q ss_pred cccChhHHHHHHHHHHh--cccCCcEEEEEEccC
Q 024008 185 CAIEPEMRAAWAQKIKD--FLKPDGELITLMFPI 216 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~--~L~~gG~l~~~~~~~ 216 (274)
+. .....+++.+.+ +|+|||++++.....
T Consensus 133 ~~---~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 133 RR---GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp ST---TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CC---CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 52 234566777765 599999999877544
No 167
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=2.6e-14 Score=118.34 Aligned_cols=103 Identities=18% Similarity=0.126 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--C--CCCCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--C--PTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~--~~~~fD~v~ 179 (274)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...++.++++++.+|+.+. . ..++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 35689999999999999999984 7899999999999999999999888877899999998762 1 234899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+... ......+++.+.++|+|||++++...
T Consensus 142 ~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 142 IDAD-----KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ECSC-----GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 7553 23446789999999999999988653
No 168
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.56 E-value=1e-14 Score=118.62 Aligned_cols=102 Identities=20% Similarity=0.072 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC------CCCeeE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP------TELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~fD~ 177 (274)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...++.++++++.+|+.+..+ .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 35689999999999999999984 789999999999999999999888887789999999976322 167999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
|++.... .....+++.+.++|+|||++++..
T Consensus 137 v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 137 IFIDADK-----QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEECSCG-----GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 9976552 344578899999999999888754
No 169
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.55 E-value=7.1e-15 Score=119.64 Aligned_cols=103 Identities=13% Similarity=0.113 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC---C----CCee
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---T----ELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~----~~fD 176 (274)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...++.++++++.+|+.+..+ . ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 35679999999999999999984 789999999999999999999888887789999999866321 1 7899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|++... ......+++.+.++|+|||++++.+.
T Consensus 143 ~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 143 LIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9996553 23456788999999999999998654
No 170
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.55 E-value=1e-14 Score=118.66 Aligned_cols=99 Identities=13% Similarity=0.085 Sum_probs=84.2
Q ss_pred CeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCC-cceEEEEcccCCC---CCCCCeeEEEecc
Q 024008 110 GRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNA-KFVSFLKADFFTW---CPTELFDLIFDYT 182 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~---~~~~~fD~v~~~~ 182 (274)
.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|++++...++. ++++++.+|+.+. .+.++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 4999999999999999987 3789999999999999999999998887 7899999998763 2257899999765
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.. .....+++.+.++|+|||++++.+
T Consensus 138 ~~-----~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 138 SP-----MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CT-----TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cH-----HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 43 234568999999999999999843
No 171
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.54 E-value=2.9e-13 Score=112.24 Aligned_cols=143 Identities=15% Similarity=0.125 Sum_probs=94.7
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----CCC---CCCeeEE
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----WCP---TELFDLI 178 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~---~~~fD~v 178 (274)
++.+|||+|||+|..+..++. ++.+|+|+|+++.+++.|++++...++.++++++.+|+.+ ..+ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 457999999999999988877 4789999999999999999999888777779999999654 233 2589999
Q ss_pred EecccccccCh-------------hHHHHHHHHHHhcccCCcEEEEEEccCC-----CCCCC-----CCcccCHHHHHHH
Q 024008 179 FDYTFFCAIEP-------------EMRAAWAQKIKDFLKPDGELITLMFPIS-----DHVGG-----PPYKVSVSDYEEV 235 (274)
Q Consensus 179 ~~~~~~~~~~~-------------~~~~~~l~~l~~~L~~gG~l~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~ 235 (274)
+++.+++.... .....++..+.++|+|||.+.+...-.. ....+ .....+.+++.++
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 224 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEE 224 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHH
Confidence 99977765430 0112344556666666665443210000 00000 0011134789999
Q ss_pred HhcCCCcEEEEeecc
Q 024008 236 LQPMGFQAISIVDNK 250 (274)
Q Consensus 236 ~~~~Gf~~~~~~~~~ 250 (274)
++++||..+.+....
T Consensus 225 l~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 225 LRIQGVPKVTYTEFC 239 (254)
T ss_dssp HHHTTCSEEEEEEEE
T ss_pred HHHcCCCceEEEEEe
Confidence 999999988876643
No 172
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=3e-14 Score=115.12 Aligned_cols=100 Identities=23% Similarity=0.162 Sum_probs=84.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC---CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-CCCeeEEEecc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPE---RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-TELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~ 182 (274)
.++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.++++....+. .++++..+|+....+ .++||+|++..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCcccCCCCCCCeeEEEECC
Confidence 456799999999999999998843 7999999999999999999876554 359999999866433 57899999999
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
++++++ +++.++|+|||++++....
T Consensus 155 ~~~~~~--------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 155 AGPKIP--------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BBSSCC--------HHHHHTEEEEEEEEEEESS
T ss_pred chHHHH--------HHHHHHcCCCcEEEEEECC
Confidence 999875 4789999999999998743
No 173
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.54 E-value=2.2e-14 Score=129.33 Aligned_cols=104 Identities=21% Similarity=0.216 Sum_probs=89.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+ .+|+|+|+++ +++.|++++..+++.++++++.+|+.+...+++||+|++..+++
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 235 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchH
Confidence 356899999999999999998865 4999999998 99999999988888788999999998854457899999988877
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEE
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~ 211 (274)
++..+.....+..+.++|+|||++++
T Consensus 236 ~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 76655556677789999999999985
No 174
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.53 E-value=1e-13 Score=121.43 Aligned_cols=129 Identities=17% Similarity=0.211 Sum_probs=102.5
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYT 182 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~ 182 (274)
..++.+|||+|||+|..+..++..+. +++|+|+++.+++.|++++...++.+++++.++|+.+. .+.++||+|+++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 34568999999999999999998766 99999999999999999999988877899999999984 4457899999988
Q ss_pred cccccC------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 183 FFCAIE------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 183 ~~~~~~------~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
++.... .+....+++.+.++| +|.+++... +.+.+.+.+...||+.......
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-------------~~~~~~~~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-------------EKKAIEEAIAENGFEIIHHRVI 352 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-------------CHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-------------CHHHHHHHHHHcCCEEEEEEEE
Confidence 866421 122367888899988 444444431 5788889999999998776543
No 175
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.53 E-value=3.1e-14 Score=122.59 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=87.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|.++..+++.+. +|+|+|++ .+++.|++++..+++.++++++.+|+.+. .+.++||+|++..+.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 3567999999999999999998776 99999999 58999999998888878899999999884 445789999998665
Q ss_pred ccc-ChhHHHHHHHHHHhcccCCcEEE
Q 024008 185 CAI-EPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 185 ~~~-~~~~~~~~l~~l~~~L~~gG~l~ 210 (274)
+.+ .......++..+.++|+|||+++
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 544 23456678899999999999987
No 176
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.53 E-value=2.9e-14 Score=123.58 Aligned_cols=115 Identities=19% Similarity=0.180 Sum_probs=92.8
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC
Q 024008 97 IIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE 173 (274)
Q Consensus 97 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 173 (274)
....++... ..++.+|||+|||+|..+..+++. ..+++++|+++.+++.++++....+.. ++++.+|+.... .+
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~-~~ 260 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV-KG 260 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC-CS
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc-cC
Confidence 334444443 334579999999999999999873 469999999999999999999877643 677899987644 67
Q ss_pred CeeEEEeccccccc---ChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 174 LFDLIFDYTFFCAI---EPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 174 ~fD~v~~~~~~~~~---~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+||+|+++.++++. +.+....++.++.++|+|||.+++...
T Consensus 261 ~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 261 RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 89999999998862 335668899999999999999998764
No 177
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.53 E-value=7.1e-14 Score=116.81 Aligned_cols=141 Identities=22% Similarity=0.186 Sum_probs=101.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEeccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++. .++.+..+|+.. ..++++||+|++..+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 45689999999999999999884 789999999999999999886 458899999987 345678999998665
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC------CCCCcccCHHHHHHHHhcCCCcEEEEeecccccCCcc
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV------GGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAIGPRK 257 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~~~~~~ 257 (274)
.. .+.++.++|+|||.+++......... ......... ..+..+||+++........... +
T Consensus 158 ~~---------~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~gf~~~~~~~~~~~~~~-~ 223 (269)
T 1p91_A 158 PC---------KAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAP----HAEQLEGFTLQQSAELCYPMRL-R 223 (269)
T ss_dssp CC---------CHHHHHHHEEEEEEEEEEEECTTTTHHHHTTTCSSCCCCCC----CCCCCTTEEEEEEEEEEEEEEE-E
T ss_pred hh---------hHHHHHHhcCCCcEEEEEEcCHHHHHHHHHHhhcccccccc----hhhHhcCCcEEEEEEEEEEEEc-C
Confidence 32 36889999999999999876543210 000000000 3456789999888776655443 1
Q ss_pred chhHHHHhhhh
Q 024008 258 GREKLGRWKRS 268 (274)
Q Consensus 258 ~~~~~~~~~~~ 268 (274)
.+.+..+.++
T Consensus 224 -~~~~~~~~~~ 233 (269)
T 1p91_A 224 -GDEAVALLQM 233 (269)
T ss_dssp -HHHHHHHHHT
T ss_pred -HHHHHHHhcc
Confidence 2334445444
No 178
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.53 E-value=6.5e-14 Score=114.93 Aligned_cols=126 Identities=13% Similarity=0.095 Sum_probs=90.9
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhc------CCCCcceEEEEcccCC-C---CCCCCe
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSS------LPNAKFVSFLKADFFT-W---CPTELF 175 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~-~---~~~~~f 175 (274)
++.+|||||||+|..+..+++ ++..++|+|+++.+++.|++++.. .+. .++.++.+|+.. . .+.++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcCe
Confidence 446899999999999999987 467999999999999999887642 222 579999999986 2 457899
Q ss_pred eEEEecccccccChh--H----HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC-CcEE
Q 024008 176 DLIFDYTFFCAIEPE--M----RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG-FQAI 244 (274)
Q Consensus 176 D~v~~~~~~~~~~~~--~----~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-f~~~ 244 (274)
|.|++...-.+.... . ...+++.+.++|+|||.+++..... .-...+.+.+..+| |..+
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~----------~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL----------ELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCH----------HHHHHHHHHHHTSTTEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCcccc
Confidence 999865432211000 0 1368999999999999999876211 12345666777776 5443
No 179
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.53 E-value=3.1e-14 Score=117.78 Aligned_cols=102 Identities=15% Similarity=0.182 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--C-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--------CCCe
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--P-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--------TELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~~~f 175 (274)
.++.+|||+|||+|..+..+++ + +.+++++|+++.+++.|++++...++.++++++.+|..+..+ .++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 4567999999999999999887 3 789999999999999999999888877789999999876311 5789
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
|+|++.... .....+++.+.++|+|||++++..
T Consensus 158 D~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADK-----DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCS-----TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCch-----HHHHHHHHHHHHhCCCCeEEEEec
Confidence 999976442 234678899999999999998754
No 180
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.53 E-value=4.4e-14 Score=115.28 Aligned_cols=139 Identities=11% Similarity=0.022 Sum_probs=107.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
.++.+|||+|||+|-++..++. +..+|+++|+++.+++.+++++..++. +.++...|.....+.++||+++++-++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCCCCCcchHHHHHHH
Confidence 3467999999999999988877 566999999999999999999988875 388999999987788999999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
++++.......+ ++.+.|+++|+++......-..........-...|.+.+.+.|+.+.+++-
T Consensus 209 ~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~ 271 (281)
T 3lcv_B 209 PCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEI 271 (281)
T ss_dssp HHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeee
Confidence 999755444555 899999999998876532211111111223467888888888996655543
No 181
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.53 E-value=1.5e-13 Score=109.75 Aligned_cols=123 Identities=14% Similarity=0.070 Sum_probs=92.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+. +++|+|+++.+++.|+++.. +++++.+|+.+.. ++||+|+++.+++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~~~D~v~~~~p~~ 121 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS--GKYDTWIMNPPFG 121 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC--CCEEEEEECCCC-
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC--CCeeEEEECCCch
Confidence 3567999999999999999988765 79999999999999999974 5899999998743 7899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
++.......+++++.+.+ |.+++.... .+...+.+.++.+| .+..+......
T Consensus 122 ~~~~~~~~~~l~~~~~~~---g~~~~~~~~-----------~~~~~~~~~~~~~g-~~~~~~~~~~~ 173 (200)
T 1ne2_A 122 SVVKHSDRAFIDKAFETS---MWIYSIGNA-----------KARDFLRREFSARG-DVFREEKVYIT 173 (200)
T ss_dssp ------CHHHHHHHHHHE---EEEEEEEEG-----------GGHHHHHHHHHHHE-EEEEEEEEEEE
T ss_pred hccCchhHHHHHHHHHhc---CcEEEEEcC-----------chHHHHHHHHHHCC-CEEEEEEEecC
Confidence 886544457888888888 444444411 14677888899989 66666554433
No 182
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.53 E-value=1e-13 Score=120.66 Aligned_cols=127 Identities=20% Similarity=0.154 Sum_probs=102.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecc
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~ 182 (274)
.++.+|||+|||+|..+..++. +..+++|+|+++.+++.|++++...++. +++|.++|+.+. .+.+.||+|+++.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCccccCCCCEEEECC
Confidence 4557999999999999999988 3489999999999999999999988876 899999999884 4456789999998
Q ss_pred cccccCh------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 183 FFCAIEP------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 183 ~~~~~~~------~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
++..... .....+++.+.++|+|||.+++... +.+.+.++++ .||+......
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~-------------~~~~~~~~~~-~g~~~~~~~~ 338 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL-------------RPALLKRALP-PGFALRHARV 338 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES-------------CHHHHHHHCC-TTEEEEEEEE
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC-------------CHHHHHHHhh-cCcEEEEEEE
Confidence 8764211 1236788999999999999998862 3455666666 8988766544
No 183
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.53 E-value=6.4e-15 Score=121.50 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-------CCCee
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-------TELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD 176 (274)
.++.+|||+|||+|..+..+++ .+.+|+++|+++.+++.|++++...++.++++++.+|+.+..+ .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 3567999999999999999987 3679999999999999999999988887889999999976322 47899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|++... ......+++.+.++|+|||++++.+.
T Consensus 139 ~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 139 FIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 9997654 23456789999999999999998653
No 184
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.52 E-value=5.4e-14 Score=118.65 Aligned_cols=120 Identities=14% Similarity=0.159 Sum_probs=93.9
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe---eEEEeccc
Q 024008 108 PKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF---DLIFDYTF 183 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~f---D~v~~~~~ 183 (274)
++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++....++.++++|+.+|+.+..+ ++| |+|+++..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK-EKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-GGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-cccCCCCEEEEcCC
Confidence 4579999999999999999874 889999999999999999999988877779999999987443 478 99999865
Q ss_pred cccc-----------ChhH------HHHHHHHHH-hcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC
Q 024008 184 FCAI-----------EPEM------RAAWAQKIK-DFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM 239 (274)
Q Consensus 184 ~~~~-----------~~~~------~~~~l~~l~-~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (274)
+... +... ...+++++. +.|+|||.+++.. +.. ..+++.++++..
T Consensus 202 yi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~-~~~----------q~~~v~~~~~~~ 264 (284)
T 1nv8_A 202 YVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI-GED----------QVEELKKIVSDT 264 (284)
T ss_dssp CBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC-CTT----------CHHHHTTTSTTC
T ss_pred CCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE-Cch----------HHHHHHHHHHhC
Confidence 4421 1100 116789999 9999999999754 111 355677777664
No 185
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.52 E-value=3.6e-14 Score=123.49 Aligned_cols=117 Identities=16% Similarity=0.117 Sum_probs=88.9
Q ss_pred cHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhh-------cCCC-CcceEEEE
Q 024008 95 APIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSS-------SLPN-AKFVSFLK 163 (274)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~-------~~~~-~~~v~~~~ 163 (274)
...+..++.... .++.+|||+|||+|..++.++. .+. +++|||+++.+++.|+++.. ..++ ..+++|++
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 344555665543 4568999999999999998886 555 59999999999999987642 2333 25799999
Q ss_pred cccCCCCC-C--CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 164 ADFFTWCP-T--ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 164 ~d~~~~~~-~--~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+.+... . ..||+|+++.++. . ++....+.++.+.|+|||+|++.+.
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~F--~-pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFAF--G-PEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTTC--C-HHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred CcccCCccccccCCccEEEEccccc--C-chHHHHHHHHHHcCCCCcEEEEeec
Confidence 99988322 1 4799999987753 3 4556677899999999999998654
No 186
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.51 E-value=7.5e-14 Score=115.13 Aligned_cols=124 Identities=19% Similarity=0.186 Sum_probs=99.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-CCCCeeEEEeccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-PTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.|+++....++.+++++..+|+.+.. +.++||+|++...
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-- 167 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR-- 167 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS--
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc--
Confidence 4567999999999999999888778999999999999999999887776668999999998865 6678999997422
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
....+++.+.++|+|||.+++..... ....++.+.+++. |..+.+.+
T Consensus 168 -----~~~~~l~~~~~~L~~gG~l~~~~~~~----------~~~~~~~~~l~~~-f~~~~~~~ 214 (248)
T 2yvl_A 168 -----EPWHYLEKVHKSLMEGAPVGFLLPTA----------NQVIKLLESIENY-FGNLEVVE 214 (248)
T ss_dssp -----CGGGGHHHHHHHBCTTCEEEEEESSH----------HHHHHHHHHSTTT-EEEEEEEE
T ss_pred -----CHHHHHHHHHHHcCCCCEEEEEeCCH----------HHHHHHHHHHHhh-CCcceEEE
Confidence 22457899999999999999987322 1345677777776 77665554
No 187
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.51 E-value=1.4e-13 Score=121.02 Aligned_cols=141 Identities=9% Similarity=-0.057 Sum_probs=104.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCc-ceEEEEcccCCCCC-----CCCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAK-FVSFLKADFFTWCP-----TELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~-----~~~fD~v~ 179 (274)
.++.+|||+|||+|..+..+++.++ +|+++|+++.+++.|++++..+++.+ +++|+.+|+.+..+ ..+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 4568999999999999999998776 89999999999999999999888765 89999999977321 35899999
Q ss_pred eccccc-----ccCh--hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 180 DYTFFC-----AIEP--EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 180 ~~~~~~-----~~~~--~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
+..... .... .....++..+.++|+|||++++.+.+.... ...-.+.+.+.+..+|..++........
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-----~~~~~~~i~~~~~~~g~~~~~~~~~~~D 365 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-----VSQFKKQIEKGFGKQKHTYLDLQQLPSD 365 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-----HHHHHHHHHHHHTTCCCEEEEEECCCTT
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-----HHHHHHHHHHHHHHcCCcEEEeCCCCCC
Confidence 976552 2221 334567888899999999999987544211 0011344556677888885554444433
No 188
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.51 E-value=4.9e-14 Score=115.40 Aligned_cols=102 Identities=21% Similarity=0.282 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEe
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFD 180 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~~ 180 (274)
.++.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|++++...+..++++++.+|+....+ .++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 3567999999999999999987 3789999999999999999999888776789999999987321 478999998
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
..... ....+++.+.++|+|||++++.+
T Consensus 133 ~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKG-----QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGS-----CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHH-----HHHHHHHHHHHHcCCCeEEEEEc
Confidence 76643 33578899999999999999864
No 189
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.51 E-value=6.4e-14 Score=120.12 Aligned_cols=110 Identities=22% Similarity=0.150 Sum_probs=89.2
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCC
Q 024008 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPT 172 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 172 (274)
...++... ..++.+|||+|||+|..+..+++. ..+|+++|+++++++.|+++....+.. +++++.+|+.+ ....
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~~~ 142 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVPEF 142 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccccC
Confidence 33444443 345689999999999999999883 346999999999999999999877764 49999999987 3345
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024008 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~ 216 (274)
++||+|++..+++++. +.+.++|+|||++++...+.
T Consensus 143 ~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp CCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCBG
T ss_pred CCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECCC
Confidence 7899999999999885 46788999999999976443
No 190
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.50 E-value=1.1e-13 Score=113.39 Aligned_cols=101 Identities=19% Similarity=0.118 Sum_probs=84.1
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-CCCeeEEEeccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-TELFDLIFDYTF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 183 (274)
..++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.|+++....+.. ++++..+|+....+ ..+||+|++..+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGFPPKAPYDVIIVTAG 167 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCCCCCCCccEEEECCc
Confidence 3456799999999999999998854 89999999999999999998877654 49999999844333 345999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
++++. +.+.+.|+|||++++....
T Consensus 168 ~~~~~--------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 168 APKIP--------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp BSSCC--------HHHHHTEEEEEEEEEEECS
T ss_pred HHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 88875 3678999999999998743
No 191
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.50 E-value=5e-14 Score=113.47 Aligned_cols=100 Identities=17% Similarity=0.130 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCCCCeeEEEecc
Q 024008 108 PKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPTELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~ 182 (274)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++....++.++++++.+|..+. ..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 5679999999999999999873 7799999999999999999988776667899999999762 2345 99999764
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.. .....+++.+.++|+|||++++..
T Consensus 135 ~~-----~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 DV-----FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT-----SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred Ch-----hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 32 234678999999999999998754
No 192
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.50 E-value=1.8e-13 Score=115.83 Aligned_cols=108 Identities=15% Similarity=0.111 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCC----CCcceEEEEcccCCCC--CCCCeeEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLP----NAKFVSFLKADFFTWC--PTELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~----~~~~v~~~~~d~~~~~--~~~~fD~v 178 (274)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.|+++++..+ ..++++++.+|..+.. ..++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 34689999999999999999883 4689999999999999999876431 1358999999998743 35789999
Q ss_pred EecccccccChhHH--HHHHHHHHhcccCCcEEEEEEc
Q 024008 179 FDYTFFCAIEPEMR--AAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 179 ~~~~~~~~~~~~~~--~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
++.......+...+ ..+++.+.++|+|||++++...
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 98654332222222 6789999999999999998763
No 193
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.49 E-value=4.3e-13 Score=117.46 Aligned_cols=129 Identities=15% Similarity=0.096 Sum_probs=101.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC---CCCeeEEEec
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---TELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~fD~v~~~ 181 (274)
.++.+|||+| |+|..+..++..+ .+|+++|+++.+++.|++++...++. +++++.+|+.+..+ .++||+|+++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEEC
Confidence 4568999999 9999999998744 59999999999999999999887765 79999999988332 3589999999
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEE-EEEEccCCCCCCCCCcccCH---HHHHHHHh-cCCCcEEEEeec
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGEL-ITLMFPISDHVGGPPYKVSV---SDYEEVLQ-PMGFQAISIVDN 249 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~Gf~~~~~~~~ 249 (274)
.+++.. ....++.++.++|+|||.+ ++...... .+. .++.+.+. ..||.+..+...
T Consensus 249 ~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~g~~~~~~~~~ 309 (373)
T 2qm3_A 249 PPETLE---AIRAFVGRGIATLKGPRCAGYFGITRRE---------SSLDKWREIQKLLLNEFNVVITDIIRN 309 (373)
T ss_dssp CCSSHH---HHHHHHHHHHHTBCSTTCEEEEEECTTT---------CCHHHHHHHHHHHHHTSCCEEEEEEEE
T ss_pred CCCchH---HHHHHHHHHHHHcccCCeEEEEEEecCc---------CCHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 876643 2478899999999999954 44443210 134 67778888 889988766543
No 194
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.49 E-value=2.8e-13 Score=109.58 Aligned_cols=135 Identities=14% Similarity=-0.014 Sum_probs=97.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+. +..+|+++|+++.+++.++++....+ .+..+..+|.....++++||+|++.-++++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 456899999999999999888 77899999999999999999987776 568999999998777789999999999898
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
++.......+ ++.+.|+++|+++...-..-..........-...|.+.+.+.++.+.+
T Consensus 181 LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~ 238 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDK 238 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEE
T ss_pred hhhhchhhHH-HHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhh
Confidence 8654444444 888899999887765511111111111112355666666554444433
No 195
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.49 E-value=5.1e-14 Score=115.74 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=85.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--C-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--------CCCCe
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--P-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--------PTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~f 175 (274)
.++.+|||+|||+|..+..+++ + +.+++++|+++.+++.|++++...++.++++++.+|..+.. +.++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 4567999999999999999987 3 78999999999999999999988888778999999987621 15789
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
|+|++... ......+++.+.++|+|||++++..
T Consensus 149 D~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99997533 2345678999999999999998754
No 196
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.49 E-value=1e-13 Score=113.99 Aligned_cols=102 Identities=20% Similarity=0.122 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC------------
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP------------ 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------ 171 (274)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...+..++++++.+|+.+..+
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 35679999999999999999873 679999999999999999999887776679999999865211
Q ss_pred -----C-CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 172 -----T-ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 -----~-~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
. ++||+|++.... .....+++.+.++|+|||++++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 789999987543 334578899999999999999865
No 197
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.49 E-value=9.8e-15 Score=119.51 Aligned_cols=147 Identities=13% Similarity=0.079 Sum_probs=95.7
Q ss_pred HHHHHHhcCC--CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCC--CcceEEEE-cccCCCC
Q 024008 97 IIVHLHQSGA--LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPN--AKFVSFLK-ADFFTWC 170 (274)
Q Consensus 97 ~~~~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~--~~~v~~~~-~d~~~~~ 170 (274)
.+...+.... .++.+|||+|||+|.++..+++.++ +|+|+|+++.+++.++++...... ..++.+.. .|+..
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~-- 101 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ-- 101 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--
Confidence 3455555442 3456999999999999999998875 999999999999998876532110 01122222 22211
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------CCCC-----CcccCHHHHHHHHhcC
Q 024008 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------VGGP-----PYKVSVSDYEEVLQPM 239 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~------~~~~-----~~~~~~~~~~~~~~~~ 239 (274)
..||.+.+..++..+ ..++.++.++|+|||.+++...+.... ..+. .+..+.+++.++++++
T Consensus 102 --~~~d~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~a 174 (232)
T 3opn_A 102 --GRPSFTSIDVSFISL-----DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQL 174 (232)
T ss_dssp --CCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHC
Confidence 124555554455444 467899999999999999864211100 0111 1124788999999999
Q ss_pred CCcEEEEeecccc
Q 024008 240 GFQAISIVDNKLA 252 (274)
Q Consensus 240 Gf~~~~~~~~~~~ 252 (274)
||.++.+...+..
T Consensus 175 Gf~v~~~~~~pi~ 187 (232)
T 3opn_A 175 GFSVKGLTFSPIK 187 (232)
T ss_dssp TEEEEEEEECSSC
T ss_pred CCEEEEEEEccCC
Confidence 9999988875543
No 198
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.48 E-value=7e-14 Score=109.44 Aligned_cols=119 Identities=14% Similarity=0.028 Sum_probs=92.3
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-C---CCCCeeEEEec
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-C---PTELFDLIFDY 181 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~---~~~~fD~v~~~ 181 (274)
..++.+|||+|||. +++|+++.+++.|+++... ++++..+|+.+. . ++++||+|++.
T Consensus 10 ~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp CCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred CCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEeEEEEC
Confidence 34568999999986 2389999999999998643 389999999873 3 57889999999
Q ss_pred cccccc-ChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 182 TFFCAI-EPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 182 ~~~~~~-~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.+++++ ++ ...++++++++|||||++++....... .....+..+.+++.++++++|| +. +.+
T Consensus 71 ~~l~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGf-i~-~~~ 133 (176)
T 2ld4_A 71 LVPGSTTLH--SAEILAEIARILRPGGCLFLKEPVETA-VDNNSKVKTASKLCSALTLSGL-VE-VKE 133 (176)
T ss_dssp CSTTCCCCC--CHHHHHHHHHHEEEEEEEEEEEEEESS-SCSSSSSCCHHHHHHHHHHTTC-EE-EEE
T ss_pred ChhhhcccC--HHHHHHHHHHHCCCCEEEEEEcccccc-cccccccCCHHHHHHHHHHCCC-cE-eec
Confidence 999998 43 367899999999999999985432211 1113345578999999999999 44 444
No 199
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.48 E-value=3.6e-13 Score=115.29 Aligned_cols=134 Identities=12% Similarity=0.085 Sum_probs=101.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-CCCCeeEEEec
Q 024008 106 ALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-PTELFDLIFDY 181 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~ 181 (274)
..++.+|||+|||+|..+..+++ .+.+|+++|+++.+++.+++++...+.. +++++.+|+.... ..++||+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccCCEEEEe
Confidence 45568999999999999999886 3479999999999999999999877653 6999999998743 35689999985
Q ss_pred cc------ccccC-------hh-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCC
Q 024008 182 TF------FCAIE-------PE-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 182 ~~------~~~~~-------~~-------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf 241 (274)
.. +...+ .. ....+++++.++|+|||++++....... .-....+.++++..||
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~-------~Ene~~v~~~l~~~~~ 267 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP-------EENEFVIQWALDNFDV 267 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG-------GGTHHHHHHHHHHSSE
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh-------HHhHHHHHHHHhcCCC
Confidence 43 22111 11 1257899999999999999987754421 1145567788899998
Q ss_pred cEEEEe
Q 024008 242 QAISIV 247 (274)
Q Consensus 242 ~~~~~~ 247 (274)
+.+.+.
T Consensus 268 ~~~~~~ 273 (315)
T 1ixk_A 268 ELLPLK 273 (315)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 877654
No 200
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.48 E-value=1.1e-13 Score=113.38 Aligned_cols=103 Identities=17% Similarity=0.109 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCC--CCee
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPT--ELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~--~~fD 176 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++....++.++++++.+|+.+. ... ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 35679999999999999999883 6799999999999999999988777767899999997652 112 7899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|++... ......+++.+.++|+|||++++.+.
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 9997654 23456789999999999999998653
No 201
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.47 E-value=2.5e-13 Score=117.31 Aligned_cols=123 Identities=9% Similarity=-0.044 Sum_probs=98.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++.. ++.+.+|+++|+++.+++.|++++..+++.++++++.+|+.+.. ++||+|++......
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~~~ 270 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPKFA 270 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTTTG
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcHhH
Confidence 4568999999999999999 88666999999999999999999998887678999999998865 88999998644322
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC-CCcEEEEeec
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM-GFQAISIVDN 249 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gf~~~~~~~~ 249 (274)
..++..+.++|+|||.+++..+... .+.+.+.++++ ||.+..+...
T Consensus 271 ------~~~l~~~~~~L~~gG~l~~~~~~~~-----------~~~~~~~l~~~~~~~i~~~~~v 317 (336)
T 2yx1_A 271 ------HKFIDKALDIVEEGGVIHYYTIGKD-----------FDKAIKLFEKKCDCEVLEKRIV 317 (336)
T ss_dssp ------GGGHHHHHHHEEEEEEEEEEEEESS-----------SHHHHHHHHHHSEEEEEEEEEE
T ss_pred ------HHHHHHHHHHcCCCCEEEEEEeecC-----------chHHHHHHHHhcCCcEEEEEEE
Confidence 2578889999999999998876553 34555666666 7776555443
No 202
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.47 E-value=3.6e-13 Score=119.16 Aligned_cols=114 Identities=21% Similarity=0.138 Sum_probs=87.6
Q ss_pred HHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC-C-CeEEEEeCChHHHHHH-------HHHhhcCCCC-cceEEEEcc
Q 024008 97 IIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP-E-RYVVGLEISDIAIKKA-------EELSSSLPNA-KFVSFLKAD 165 (274)
Q Consensus 97 ~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~iD~s~~~~~~a-------~~~~~~~~~~-~~v~~~~~d 165 (274)
.+..++.... .++.+|||+|||+|..+..+++. + .+|+|+|+++.+++.| ++++...++. .+++++.+|
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD 309 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 309 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC
Confidence 3445555543 35579999999999999999882 4 4899999999999999 8888777643 579999886
Q ss_pred cCCC---C--CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 166 FFTW---C--PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 166 ~~~~---~--~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.... . ..++||+|+++.++. . +....++.++.++|+|||++++..
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l~--~-~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFLF--D-EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTTC--C-HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccccccccccccCCCCEEEEeCccc--c-ccHHHHHHHHHHhCCCCeEEEEee
Confidence 5421 1 246899999876652 2 455678899999999999999864
No 203
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=3.9e-13 Score=109.37 Aligned_cols=102 Identities=21% Similarity=0.166 Sum_probs=83.5
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCC----CcceEEEEcccCCC-CCCCCeeE
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPN----AKFVSFLKADFFTW-CPTELFDL 177 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~-~~~~~fD~ 177 (274)
..++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++....+. .++++++.+|+... ...++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 345689999999999999988873 36999999999999999998876432 24799999998763 33568999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
|++..++.++. +.+.++|+|||++++....
T Consensus 155 i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 99998887663 5788999999999998743
No 204
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.47 E-value=1.7e-13 Score=115.17 Aligned_cols=132 Identities=16% Similarity=0.188 Sum_probs=98.8
Q ss_pred HHHhcC-CCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcC-C-CCcceEEEEcccCCC-CCC
Q 024008 100 HLHQSG-ALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSL-P-NAKFVSFLKADFFTW-CPT 172 (274)
Q Consensus 100 ~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~-~-~~~~v~~~~~d~~~~-~~~ 172 (274)
.++... ..++.+|||+|||+|..+..+++ ++.+++++|+++.+++.|+++.... + +.++++++.+|+.+. .+.
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~ 169 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPD 169 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCT
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCC
Confidence 344433 34567999999999999999887 3679999999999999999998765 3 346799999999874 446
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhc-CCCcEEEEee
Q 024008 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQP-MGFQAISIVD 248 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gf~~~~~~~ 248 (274)
++||+|++... ....++.++.++|+|||.+++...... ...++.+.++. .||..+++.+
T Consensus 170 ~~~D~v~~~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~----------~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 170 GSVDRAVLDML-------APWEVLDAVSRLLVAGGVLMVYVATVT----------QLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp TCEEEEEEESS-------CGGGGHHHHHHHEEEEEEEEEEESSHH----------HHHHHHHHHHHHSSBCCCEEEC
T ss_pred CceeEEEECCc-------CHHHHHHHHHHhCCCCCEEEEEeCCHH----------HHHHHHHHHHhcCCcCCcEEEE
Confidence 78999997321 223678999999999999999874221 24455566666 7887655544
No 205
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.47 E-value=2.7e-13 Score=113.84 Aligned_cols=143 Identities=17% Similarity=0.083 Sum_probs=104.2
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC--CC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMAS--PE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC- 170 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~--~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 170 (274)
...+..++. ..++.+|||+|||+|..+..+++ .+ .+|+++|+++.+++.+++++...+.. +++++.+|+....
T Consensus 72 s~l~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~ 148 (274)
T 3ajd_A 72 SMIPPIVLN--PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKD 148 (274)
T ss_dssp GGHHHHHHC--CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHH
T ss_pred HHHHHHHhC--CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcch
Confidence 344444554 45668999999999999998887 45 79999999999999999999887764 7999999997733
Q ss_pred ----CCCCeeEEEecccccccC---------h-------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHH
Q 024008 171 ----PTELFDLIFDYTFFCAIE---------P-------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVS 230 (274)
Q Consensus 171 ----~~~~fD~v~~~~~~~~~~---------~-------~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 230 (274)
..++||+|++...+.... . .....+++.+.++|+|||++++........ -..+
T Consensus 149 ~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~-------ene~ 221 (274)
T 3ajd_A 149 YLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVE-------ENEE 221 (274)
T ss_dssp HHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTT-------SSHH
T ss_pred hhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChH-------HhHH
Confidence 257899999874433210 0 123678999999999999999887544321 1355
Q ss_pred HHHHHHhcC-CCcEEEEe
Q 024008 231 DYEEVLQPM-GFQAISIV 247 (274)
Q Consensus 231 ~~~~~~~~~-Gf~~~~~~ 247 (274)
.+.++++.+ +|+++.+.
T Consensus 222 ~v~~~l~~~~~~~~~~~~ 239 (274)
T 3ajd_A 222 VIKYILQKRNDVELIIIK 239 (274)
T ss_dssp HHHHHHHHCSSEEEECCC
T ss_pred HHHHHHHhCCCcEEecCc
Confidence 666667554 57665543
No 206
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.47 E-value=1.6e-13 Score=111.80 Aligned_cols=102 Identities=25% Similarity=0.286 Sum_probs=84.3
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCC-------CeEEEEeCChHHHHHHHHHhhcCCC----CcceEEEEcccCCC-----
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPE-------RYVVGLEISDIAIKKAEELSSSLPN----AKFVSFLKADFFTW----- 169 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~-------~~v~~iD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~----- 169 (274)
..++.+|||+|||+|..+..+++.. .+|+++|+++.+++.|+++....+. ..+++++.+|+...
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 3456899999999999999888733 4999999999999999999876542 35799999999873
Q ss_pred CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 170 CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 170 ~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
...++||+|++..+++++. +.+.++|+|||++++....
T Consensus 158 ~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 KELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEcc
Confidence 3457899999998887653 6788999999999987743
No 207
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.47 E-value=9.3e-14 Score=113.29 Aligned_cols=102 Identities=21% Similarity=0.192 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----C---CCee
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----T---ELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~---~~fD 176 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|++++...+..++++++.+|+.+..+ . ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 45689999999999999999883 679999999999999999999888777789999999865211 1 6899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+|++.... .....+++.+.++|+|||.+++.+
T Consensus 148 ~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 148 VAVVDADK-----ENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEECSCS-----TTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEEC
Confidence 99986542 334578899999999999999865
No 208
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.46 E-value=2.5e-13 Score=119.97 Aligned_cols=137 Identities=17% Similarity=0.011 Sum_probs=103.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCC-CcceEEEEcccCCCCC-----CCCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPN-AKFVSFLKADFFTWCP-----TELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~-----~~~fD~v~ 179 (274)
.++.+|||+|||+|..+..+++.|+ +|+++|+++.+++.|++++..+++ .++++++.+|+.+..+ .++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4568999999999999999999765 999999999999999999998877 5589999999987432 46899999
Q ss_pred ecccccccC-------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 180 DYTFFCAIE-------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 180 ~~~~~~~~~-------~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
+..+..... ......++..+.+.|+|||++++.+.+.... .....+.+.+.+..+|+....+..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~~i~~~~~~~g~~~~~i~~ 369 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT-----SDLFQKIIADAAIDAGRDVQFIEQ 369 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC-----HHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-----HHHHHHHHHHHHHHcCCeEEEEEE
Confidence 876542211 0345678899999999999999987544211 000133445567778866655544
No 209
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=2.9e-13 Score=113.50 Aligned_cols=105 Identities=16% Similarity=0.007 Sum_probs=87.0
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 183 (274)
..++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..+++. ++.++.+|+.+....++||+|++..+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVELKDVADRVIMGYV 195 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCCTTCEEEEEECCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCccCCceEEEECCc
Confidence 345679999999999999999884 459999999999999999999888764 58899999987622468999998766
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCC
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS 217 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~ 217 (274)
.. ...++..+.+.|+|||++++.++...
T Consensus 196 ~~------~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 196 HK------THKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp SS------GGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred cc------HHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 42 23567889999999999998886553
No 210
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.46 E-value=4.2e-13 Score=118.50 Aligned_cols=144 Identities=16% Similarity=0.001 Sum_probs=104.8
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----CC
Q 024008 99 VHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----PT 172 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~ 172 (274)
..++.....++.+|||+|||+|..+..++..|+ +|+++|+++.+++.|++++..+++.++++++.+|+.+.. ..
T Consensus 208 ~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~ 287 (396)
T 2as0_A 208 RLALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKG 287 (396)
T ss_dssp HHHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhC
Confidence 334443333678999999999999999998765 999999999999999999998887658999999998732 25
Q ss_pred CCeeEEEecccccccCh-------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 173 ELFDLIFDYTFFCAIEP-------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~~~-------~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
++||+|++......... .....++..+.++|+|||.+++..+..... ...-.+.+.+.+...|.....
T Consensus 288 ~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~ 362 (396)
T 2as0_A 288 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD-----LQMFKDMIIAAGAKAGKFLKM 362 (396)
T ss_dssp CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC-----HHHHHHHHHHHHHHTTEEEEE
T ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC-----HHHHHHHHHHHHHHcCCeEEE
Confidence 68999998765432221 345678899999999999998887543211 000123344566667766655
Q ss_pred Ee
Q 024008 246 IV 247 (274)
Q Consensus 246 ~~ 247 (274)
+.
T Consensus 363 i~ 364 (396)
T 2as0_A 363 LE 364 (396)
T ss_dssp SS
T ss_pred Ee
Confidence 54
No 211
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.46 E-value=7.7e-14 Score=128.64 Aligned_cols=107 Identities=18% Similarity=0.210 Sum_probs=87.6
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEecccc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDYTFF 184 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~fD~v~~~~~~ 184 (274)
.+.+|||||||.|.++..+++.|++|+|||+++.+++.|+.++...+. .+++|.++++.+. ..+++||+|+|..++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 457999999999999999999999999999999999999999887653 2699999999773 456789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
+|++++..-..+..+.+.|+++|..++....
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 9996544333345677778888876665543
No 212
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.45 E-value=1.8e-13 Score=111.65 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=83.8
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC-CC-------CeEEEEeCChHHHHHHHHHhhcCCC----CcceEEEEcccCCCCCC-
Q 024008 106 ALPKGRALVPGCGTGYDVVAMAS-PE-------RYVVGLEISDIAIKKAEELSSSLPN----AKFVSFLKADFFTWCPT- 172 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~-~~-------~~v~~iD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~- 172 (274)
..++.+|||+|||+|..+..+++ .+ .+|+++|+++.+++.|+++....+. ..+++++.+|.....+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 34567999999999999998887 33 5999999999999999998765431 14699999999874443
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
++||+|++..+++++. +.+.+.|+|||++++....
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred CCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 7899999999988764 5789999999999998754
No 213
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.44 E-value=1.2e-12 Score=116.91 Aligned_cols=143 Identities=18% Similarity=0.172 Sum_probs=105.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----CCCCeeEEEec
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----PTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~fD~v~~~ 181 (274)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|++++..++.. +++|+.+|+.+.. +.++||+|+++
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 34579999999999999999998889999999999999999999887764 7999999998732 24689999987
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccccCCccchhH
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAIGPRKGREK 261 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~~~~~~~~~~ 261 (274)
....... .+++.+.+ ++|++++++.+.+. +...-...+.+.||.+..+...+. ++.-...|.
T Consensus 364 PPr~g~~-----~~~~~l~~-~~p~~ivyvsc~p~-----------tlard~~~l~~~Gy~~~~~~~~d~-Fp~t~HvE~ 425 (433)
T 1uwv_A 364 PARAGAA-----GVMQQIIK-LEPIRIVYVSCNPA-----------TLARDSEALLKAGYTIARLAMLDM-FPHTGHLES 425 (433)
T ss_dssp CCTTCCH-----HHHHHHHH-HCCSEEEEEESCHH-----------HHHHHHHHHHHTTCEEEEEEEECC-STTSSCCEE
T ss_pred CCCccHH-----HHHHHHHh-cCCCeEEEEECChH-----------HHHhhHHHHHHCCcEEEEEEEecc-CCCCCeEEE
Confidence 7665442 34455543 78999888876222 333445667778999988776432 333345677
Q ss_pred HHHhhhh
Q 024008 262 LGRWKRS 268 (274)
Q Consensus 262 ~~~~~~~ 268 (274)
+.++.|.
T Consensus 426 v~ll~r~ 432 (433)
T 1uwv_A 426 MVLFSRV 432 (433)
T ss_dssp EEEEEC-
T ss_pred EEEEEEC
Confidence 6666543
No 214
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.44 E-value=1.2e-13 Score=119.63 Aligned_cols=128 Identities=14% Similarity=0.143 Sum_probs=100.2
Q ss_pred CCCeEEEEcCCcchhHHHhhCC---C----CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEe
Q 024008 108 PKGRALVPGCGTGYDVVAMASP---E----RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~---~----~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 180 (274)
++.+|||+|||+|.++..+++. . .+++|+|+++.+++.|+.+....+. ++++..+|.....+.++||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCccccCCccEEEE
Confidence 4579999999999999888762 1 6899999999999999999876654 58999999988666688999999
Q ss_pred cccccccChhHH----------------HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024008 181 YTFFCAIEPEMR----------------AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 181 ~~~~~~~~~~~~----------------~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~ 243 (274)
+.++++++.+.. ..++.++.+.|+|||+++++....... + -...++.+++.+.|+..
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~--~----~~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFG--T----SDFAKVDKFIKKNGHIE 280 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGG--S----TTHHHHHHHHHHHEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcC--C----chHHHHHHHHHhCCeEE
Confidence 999877643321 258999999999999988877432111 1 13578888888878744
No 215
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.44 E-value=5.2e-13 Score=114.44 Aligned_cols=133 Identities=19% Similarity=0.202 Sum_probs=94.8
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcC--CC-CcceEEEEcccCCC--CCCCCeeEEEe
Q 024008 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSL--PN-AKFVSFLKADFFTW--CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~~~~~fD~v~~ 180 (274)
++.+|||+|||+|..+..+++. +.+++++|+++.+++.|++++... +. .++++++.+|+.+. ...++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4579999999999999999884 579999999999999999998652 22 35799999998763 23578999998
Q ss_pred cccccccCh-hHH--HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 181 YTFFCAIEP-EMR--AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 181 ~~~~~~~~~-~~~--~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
...- .+.+ ... ..+++.+.++|+|||++++...+.... .-...++.+.+++. |..+....
T Consensus 196 d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~------~~~~~~~~~~l~~~-F~~v~~~~ 258 (321)
T 2pt6_A 196 DSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIH------VGTIKNMIGYAKKL-FKKVEYAN 258 (321)
T ss_dssp ECCC-SSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTC------HHHHHHHHHHHHTT-CSEEEEEE
T ss_pred CCcC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC------HHHHHHHHHHHHHH-CCCeEEEE
Confidence 6532 1211 111 578999999999999999875322100 01234555666665 55554443
No 216
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.44 E-value=5.2e-13 Score=125.54 Aligned_cols=135 Identities=19% Similarity=0.191 Sum_probs=104.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCC-cceEEEEcccCCC--CCCCCeeEEEecc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNA-KFVSFLKADFFTW--CPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~--~~~~~fD~v~~~~ 182 (274)
.++.+|||+|||+|..+..++..|+ +|+++|+|+.+++.|++++..+++. ++++++++|+++. ...++||+|++..
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 3578999999999999999988777 6999999999999999999988876 5899999999873 2357899999876
Q ss_pred cccc--------cC-hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024008 183 FFCA--------IE-PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 183 ~~~~--------~~-~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~ 252 (274)
.... +. ......++..+.++|+|||++++.+.... +... .+.++..||+...+.....+
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~-------~~~~----~~~l~~~g~~~~~i~~~~lp 685 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG-------FRMD----LDGLAKLGLKAQEITQKTLS 685 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTT-------CCCC----HHHHHHTTEEEEECTTTTCC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcc-------cccC----HHHHHHcCCceeeeeeccCC
Confidence 5321 11 13556789999999999999998774321 1112 45677889886666654443
No 217
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.43 E-value=5.7e-13 Score=117.06 Aligned_cols=135 Identities=21% Similarity=0.055 Sum_probs=101.2
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----CCCeeEEEecc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----TELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD~v~~~~ 182 (274)
++.+|||+|||+|..+..++..+.+|+++|+++.+++.|++++..++..+ ++++.+|+.+..+ .++||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 66799999999999999998876699999999999999999998887754 9999999987322 56899999876
Q ss_pred cccccCh-------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 183 FFCAIEP-------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 183 ~~~~~~~-------~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.....+. .....++..+.++|+|||.+++...+.... ...-.+.+.+.+..+|.....+..
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~~i~~~~~~~g~~~~~i~~ 355 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT-----EPLFYAMVAEAAQDAHRLLRVVEK 355 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-----HHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC-----HHHHHHHHHHHHHHcCCeEEEEEc
Confidence 5432221 345678899999999999999987544211 000134455567778865554443
No 218
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.43 E-value=1.5e-12 Score=114.34 Aligned_cols=143 Identities=11% Similarity=-0.012 Sum_probs=100.9
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--CCCCee
Q 024008 99 VHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--PTELFD 176 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD 176 (274)
..++.....++.+|||+|||+|..+..++..|+.|+++|+|+.+++.|++++..+++. .++..+|+++.. ..+.||
T Consensus 205 r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~l~~~~~~fD 282 (393)
T 4dmg_A 205 RRLFEAMVRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPTLRGLEGPFH 282 (393)
T ss_dssp HHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHHHHTCCCCEE
T ss_pred HHHHHHHhcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHHHHHhcCCCC
Confidence 4444444445789999999999999999998889999999999999999999887765 356689988732 134499
Q ss_pred EEEecccccccCh-------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 177 LIFDYTFFCAIEP-------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 177 ~v~~~~~~~~~~~-------~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
+|++......-.. .....++..+.++|+|||.+++........ ...-.+.+.+.+..+|.....+..
T Consensus 283 ~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~-----~~~f~~~v~~a~~~~g~~~~i~~~ 356 (393)
T 4dmg_A 283 HVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLR-----LEDLLEVARRAAADLGRRLRVHRV 356 (393)
T ss_dssp EEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-----HHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC-----HHHHHHHHHHHHHHhCCeEEEEEE
Confidence 9998765421111 234678899999999999999776544211 000123445556666766555544
No 219
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.43 E-value=1.2e-12 Score=110.37 Aligned_cols=134 Identities=17% Similarity=0.146 Sum_probs=94.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCC--C-CcceEEEEcccCCC--CCCCCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLP--N-AKFVSFLKADFFTW--CPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~--~-~~~v~~~~~d~~~~--~~~~~fD~v~ 179 (274)
.++.+|||+|||+|..+..+++. ..+++++|+++.+++.|+++++..+ + .++++++.+|+.+. ...++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 34579999999999999999883 4699999999999999999986532 1 36899999998762 2357899999
Q ss_pred ecccccccChhHH--HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 180 DYTFFCAIEPEMR--AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 180 ~~~~~~~~~~~~~--~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
+.......+.... ..+++.+.++|+|||++++...+.... .-....+.+.+++. |..+.+.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~------~~~~~~~~~~l~~~-F~~v~~~ 219 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIH------VGTIKNMIGYAKKL-FKKVEYA 219 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTC------HHHHHHHHHHHHTT-CSEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccC------HHHHHHHHHHHHHH-CCceEEE
Confidence 8644322222222 578999999999999999875322100 01234455555554 6655443
No 220
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.43 E-value=8.2e-13 Score=109.05 Aligned_cols=123 Identities=15% Similarity=0.135 Sum_probs=88.3
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcC--------CCCcceEEEEcccCCC----CCCC
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSL--------PNAKFVSFLKADFFTW----CPTE 173 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~--------~~~~~v~~~~~d~~~~----~~~~ 173 (274)
++.+|||+|||+|..+..+++ ++.+++|+|+++.+++.+++++... +. .++.++.+|+.+. .+.+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhcccc
Confidence 457999999999999999988 4568999999999999999887643 44 4799999999862 3467
Q ss_pred CeeEEEecccccccChh------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCC
Q 024008 174 LFDLIFDYTFFCAIEPE------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf 241 (274)
.+|.|+....-...... ....++..+.++|+|||.+++..-.. .-.+.+.+.+..+|+
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~----------~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVK----------DLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCH----------HHHHHHHHHHHHSTT
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccH----------HHHHHHHHHHHhCcC
Confidence 89999854321111000 00478999999999999999865111 012445556677774
No 221
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.43 E-value=7.3e-13 Score=111.16 Aligned_cols=134 Identities=14% Similarity=0.086 Sum_probs=95.6
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-C-CeEEEEeCChHHHHHHHHHhhc--CCC-CcceEEEEcccCCC--CCCCCeeEEEe
Q 024008 108 PKGRALVPGCGTGYDVVAMASP-E-RYVVGLEISDIAIKKAEELSSS--LPN-AKFVSFLKADFFTW--CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~iD~s~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~--~~~~~fD~v~~ 180 (274)
.+.+|||+|||+|..+..+++. + .+++++|+++.+++.|++++.. .++ .++++++.+|.... ...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4689999999999999999884 4 6999999999999999998753 122 36899999998762 23578999998
Q ss_pred cccccccChh--HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 181 YTFFCAIEPE--MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 181 ~~~~~~~~~~--~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.......+.. ....+++.+.++|+|||++++...++.. ..-....+.+.+++. |..+....
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~------~~~~~~~~~~~l~~~-F~~v~~~~ 217 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF------TPELITNVQRDVKEI-FPITKLYT 217 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT------CHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc------cHHHHHHHHHHHHHh-CCCeEEEE
Confidence 6543222111 1246889999999999999887532210 011245566667776 66555443
No 222
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.43 E-value=8e-13 Score=114.15 Aligned_cols=103 Identities=16% Similarity=0.087 Sum_probs=79.2
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCC-C--CeEEEEeCChHHHHHHHHHhhcCC----------CCcceEEEEcccCCC---
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASP-E--RYVVGLEISDIAIKKAEELSSSLP----------NAKFVSFLKADFFTW--- 169 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~-~--~~v~~iD~s~~~~~~a~~~~~~~~----------~~~~v~~~~~d~~~~--- 169 (274)
..++.+|||+|||+|..+..+++. + .+|+++|+++.+++.|+++....+ ...++++..+|+.+.
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 456689999999999999999874 3 799999999999999999986421 235799999999874
Q ss_pred CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 170 CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 170 ~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
.+.++||+|++..... ..++.++.++|+|||.+++....
T Consensus 183 ~~~~~fD~V~~~~~~~-------~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 183 IKSLTFDAVALDMLNP-------HVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp -----EEEEEECSSST-------TTTHHHHGGGEEEEEEEEEEESS
T ss_pred cCCCCeeEEEECCCCH-------HHHHHHHHHhcCCCcEEEEEeCC
Confidence 2456899999754321 23678999999999999987643
No 223
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.42 E-value=4.9e-13 Score=104.02 Aligned_cols=118 Identities=13% Similarity=0.162 Sum_probs=91.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---------CCCCC
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---------CPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~~~~ 174 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++ ++.. .+++++.+|+.+. .++++
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDSK 88 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCCc
Confidence 45679999999999999988873 57999999998 5422 4689999999874 55678
Q ss_pred eeEEEecccccccChh---HH------HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 175 FDLIFDYTFFCAIEPE---MR------AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~---~~------~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
||+|+++.++++.... .. ..++..+.++|+|||.+++..+... ...++.+.++.. |..+.
T Consensus 89 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------~~~~~~~~~~~~-~~~~~ 157 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE----------GFDEYLREIRSL-FTKVK 157 (180)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST----------THHHHHHHHHHH-EEEEE
T ss_pred eeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC----------cHHHHHHHHHHh-hhhEE
Confidence 9999998887765322 11 5789999999999999998775432 456777777774 77666
Q ss_pred Ee
Q 024008 246 IV 247 (274)
Q Consensus 246 ~~ 247 (274)
+.
T Consensus 158 ~~ 159 (180)
T 1ej0_A 158 VR 159 (180)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 224
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.41 E-value=5.9e-13 Score=112.10 Aligned_cols=106 Identities=20% Similarity=0.172 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcC--CC--------CcceEEEEcccCCCCC-CCC
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSL--PN--------AKFVSFLKADFFTWCP-TEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~--~~--------~~~v~~~~~d~~~~~~-~~~ 174 (274)
..+.+|||+|||+|..+..+++. ..+++++|+++.+++.|++++ .. ++ .++++++.+|..+..+ .++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 34579999999999999999885 459999999999999999988 33 21 3689999999866211 578
Q ss_pred eeEEEecccccccChhH--HHHHHHHHHhcccCCcEEEEEE
Q 024008 175 FDLIFDYTFFCAIEPEM--RAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~--~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
||+|++......-+... ...+++.+.++|+|||++++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999865532211122 2678899999999999998875
No 225
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=8.1e-13 Score=112.18 Aligned_cols=104 Identities=18% Similarity=0.080 Sum_probs=83.4
Q ss_pred CeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEecccc
Q 024008 110 GRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDYTFF 184 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~fD~v~~~~~~ 184 (274)
.+|||||||+|..+..+++ ++.+++++|+++.+++.|++++... ..++++++.+|..+. .+.++||+|++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 4999999999999999987 6789999999999999999998653 246899999999873 245789999986433
Q ss_pred cccChhH--HHHHHHHHHhcccCCcEEEEEEc
Q 024008 185 CAIEPEM--RAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 185 ~~~~~~~--~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
....+.. ...+++.++++|+|||++++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2211111 25789999999999999988764
No 226
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.41 E-value=1.4e-12 Score=111.53 Aligned_cols=134 Identities=13% Similarity=0.071 Sum_probs=95.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhc--CC-C-CcceEEEEcccCCC--CCCCCeeEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSS--LP-N-AKFVSFLKADFFTW--CPTELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~--~~-~-~~~v~~~~~d~~~~--~~~~~fD~v 178 (274)
..+.+|||||||+|..+..+++. +.+++++|+++.+++.|++++.. .+ + .++++++.+|+.+. ...++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 34579999999999999999884 56999999999999999998754 21 1 36899999999763 245789999
Q ss_pred Eecccccc---cChhH--HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024008 179 FDYTFFCA---IEPEM--RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 179 ~~~~~~~~---~~~~~--~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 246 (274)
++....+. -+... ...+++.+.++|+|||++++...++... . .-....+.+.+++. |..+..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--~---~~~~~~~~~~l~~~-F~~v~~ 222 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLT--H---HRVHPVVHRTVREA-FRYVRS 222 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC--------CHHHHHHHHHHTT-CSEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcccc--C---HHHHHHHHHHHHHH-CCceEE
Confidence 99765543 11111 3678999999999999999865332100 0 01245566666665 554443
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.40 E-value=4.8e-13 Score=114.21 Aligned_cols=105 Identities=22% Similarity=0.254 Sum_probs=80.6
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcC--CC-CcceEEEEcccCCC--CCCCCeeEEEe
Q 024008 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSL--PN-AKFVSFLKADFFTW--CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~~~~~fD~v~~ 180 (274)
.+.+|||||||+|..+..+++. ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. ...++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4579999999999999999883 569999999999999999998653 22 46899999998763 24578999998
Q ss_pred cccccccCh-hHH--HHHHHHHHhcccCCcEEEEEE
Q 024008 181 YTFFCAIEP-EMR--AAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~-~~~--~~~l~~l~~~L~~gG~l~~~~ 213 (274)
...- ++.+ ... ..+++.+.++|+|||++++..
T Consensus 188 d~~~-~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSD-PVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCC-CCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 6532 2221 111 678999999999999999865
No 228
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.40 E-value=1.1e-12 Score=112.94 Aligned_cols=107 Identities=15% Similarity=0.138 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcC--CC-CcceEEEEcccCCC---CCCCCeeEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSL--PN-AKFVSFLKADFFTW---CPTELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~---~~~~~fD~v 178 (274)
..+.+|||||||+|..+..+++. ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. .+.++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 34579999999999999999884 569999999999999999987642 22 25799999998763 235789999
Q ss_pred EecccccccChhH--HHHHHHHHHhcccCCcEEEEEE
Q 024008 179 FDYTFFCAIEPEM--RAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 179 ~~~~~~~~~~~~~--~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
++...-..-.... ...+++.+.++|+|||++++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9865421111111 3678999999999999999864
No 229
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.40 E-value=9.7e-13 Score=111.90 Aligned_cols=107 Identities=21% Similarity=0.213 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhc--CCC-CcceEEEEcccCCC--CCCCCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSS--LPN-AKFVSFLKADFFTW--CPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~--~~~~~fD~v~ 179 (274)
..+.+|||+|||+|..+..+++. ..+++++|+++.+++.|++++.. .++ .++++++.+|+.+. ...++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 34579999999999999999884 46999999999999999998764 222 36899999998762 3457899999
Q ss_pred ecccccccChh--HHHHHHHHHHhcccCCcEEEEEE
Q 024008 180 DYTFFCAIEPE--MRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 180 ~~~~~~~~~~~--~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+.......+.. ....+++++.++|+|||++++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 86543221111 12568899999999999999866
No 230
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.40 E-value=9.3e-13 Score=111.68 Aligned_cols=134 Identities=13% Similarity=0.012 Sum_probs=91.9
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhc--CCC-CcceEEEEcccCCC--CCCCCeeEEEe
Q 024008 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSS--LPN-AKFVSFLKADFFTW--CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~--~~~-~~~v~~~~~d~~~~--~~~~~fD~v~~ 180 (274)
.+.+|||+|||+|..+..+++. ..+|+++|+++.+++.|++++.. .+. .++++++.+|+... ...++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999999884 46999999999999999998753 122 35799999998762 23578999997
Q ss_pred cccccccCh-h--HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 181 YTFFCAIEP-E--MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 181 ~~~~~~~~~-~--~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
........+ . ....+++.+.++|+|||++++...++.. ..-....+.+.+++. |..+....
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~------~~~~~~~~~~~l~~~-F~~v~~~~ 233 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFY------DIGWFKLAYRRISKV-FPITRVYL 233 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTT------THHHHHHHHHHHHHH-CSEEEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCccc------CHHHHHHHHHHHHHH-CCceEEEE
Confidence 543220111 1 1257889999999999999987532210 001234555666665 55555433
No 231
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.40 E-value=3.9e-12 Score=101.43 Aligned_cols=117 Identities=15% Similarity=0.190 Sum_probs=85.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--C--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC------------
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS--P--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC------------ 170 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------------ 170 (274)
.++.+|||+|||+|..+..+++ + +.+|+|+|+++.. . ..+++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~---~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P---IPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C---CTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C---CCCceEEEccccchhhhhhcccccccc
Confidence 3557999999999999999987 3 5799999999831 1 146899999998743
Q ss_pred --------------CCCCeeEEEecccccccC---hhH------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCccc
Q 024008 171 --------------PTELFDLIFDYTFFCAIE---PEM------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKV 227 (274)
Q Consensus 171 --------------~~~~fD~v~~~~~~~~~~---~~~------~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~ 227 (274)
+.++||+|++..++++.. .+. ...++..+.++|+|||.+++..+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~---------- 158 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS---------- 158 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST----------
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC----------
Confidence 457899999987766531 111 12478899999999999998665331
Q ss_pred CHHHHHHHHhcCCCcEEEE
Q 024008 228 SVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 228 ~~~~~~~~~~~~Gf~~~~~ 246 (274)
+..++.+.++. .|..+.+
T Consensus 159 ~~~~l~~~l~~-~f~~v~~ 176 (201)
T 2plw_A 159 QTNNLKTYLKG-MFQLVHT 176 (201)
T ss_dssp THHHHHHHHHT-TEEEEEE
T ss_pred CHHHHHHHHHH-HHheEEE
Confidence 35677777766 4665554
No 232
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.39 E-value=9.7e-13 Score=111.00 Aligned_cols=111 Identities=19% Similarity=0.176 Sum_probs=83.3
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCee
Q 024008 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFD 176 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 176 (274)
+..++.... .++.+|||+|||+|..+..+++.+.+|+++|+++.+++.++++....+..++++++.+|+.+... ..||
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-~~fD 95 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-PFFD 95 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC-CCCS
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc-hhhc
Confidence 444444443 35579999999999999999998889999999999999999998766554689999999987433 3799
Q ss_pred EEEecccccccChhHHHHHHHH--------------H--HhcccCCcEEE
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQK--------------I--KDFLKPDGELI 210 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~--------------l--~~~L~~gG~l~ 210 (274)
+|+++.+++..+ +....+++. + +.+++|||.++
T Consensus 96 ~vv~nlpy~~~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 96 TCVANLPYQISS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEEEECCGGGHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEEEecCcccch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 999987766432 233333321 1 35889999764
No 233
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.38 E-value=6.7e-12 Score=99.59 Aligned_cols=119 Identities=13% Similarity=0.208 Sum_probs=87.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--------C----CC
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--------T----EL 174 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------~----~~ 174 (274)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.. . ..+++++++|+.+... . ++
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---------~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---------E---IAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---------C---CTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---------c---CCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 456899999999999999999988899999999741 1 1469999999987321 1 48
Q ss_pred eeEEEecccccccC---h------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 175 FDLIFDYTFFCAIE---P------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 175 fD~v~~~~~~~~~~---~------~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
||+|++........ . .....++..+.++|+|||.+++..+... ...++.+.++. .|..+.
T Consensus 92 ~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~----------~~~~~~~~l~~-~F~~v~ 160 (191)
T 3dou_A 92 VDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD----------MTNDFIAIWRK-NFSSYK 160 (191)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST----------HHHHHHHHHGG-GEEEEE
T ss_pred ceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC----------CHHHHHHHHHH-hcCEEE
Confidence 99999976432211 0 1235778889999999999998776442 34577777766 577666
Q ss_pred Eee
Q 024008 246 IVD 248 (274)
Q Consensus 246 ~~~ 248 (274)
+..
T Consensus 161 ~~k 163 (191)
T 3dou_A 161 ISK 163 (191)
T ss_dssp EEC
T ss_pred EEC
Confidence 544
No 234
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.36 E-value=3.8e-13 Score=110.45 Aligned_cols=120 Identities=12% Similarity=0.018 Sum_probs=89.6
Q ss_pred CCCeEEEEcCCcchhHHHhhCC------CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---C-CC-CCee
Q 024008 108 PKGRALVPGCGTGYDVVAMASP------ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---C-PT-ELFD 176 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~------~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~-~~-~~fD 176 (274)
++.+|||||||+|..+..+++. +.+|+++|+++.+++.|+. ..++++++.+|+.+. . .. .+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cCCceEEEECcchhHHHHHhhccCCCC
Confidence 4679999999999999988764 6799999999999888872 125799999999873 1 22 3799
Q ss_pred EEEecccccccChhHHHHHHHHHHh-cccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC--CCcEE
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKD-FLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM--GFQAI 244 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~-~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Gf~~~ 244 (274)
+|++... +. ....++.++.+ +|+|||++++.+..+.. .....+.+.++++.+ +|.+.
T Consensus 155 ~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d~~~~~------~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 155 LIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIEDMIPYW------YRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp EEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECSCHHHH------HHHCHHHHHHHHHTTTTTEEEE
T ss_pred EEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEeCcccc------cccCHHHHHHHHHhCcccEEEc
Confidence 9997654 22 34568899997 99999999997541100 012456888889888 56654
No 235
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.35 E-value=1.6e-12 Score=113.73 Aligned_cols=145 Identities=11% Similarity=0.030 Sum_probs=101.8
Q ss_pred HHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---CC-----
Q 024008 101 LHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---PT----- 172 (274)
Q Consensus 101 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~----- 172 (274)
+++.....+.+|||+|||+|.++..+++...+|+|+|+++.+++.|++++..+++ ++++|+.+|+.+.. ..
T Consensus 206 ~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 206 ALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp HHHHTTTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHHHHHHSSCCCCT
T ss_pred HHHHhhcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHHHHHHhhccccc
Confidence 3444444467899999999999999998777999999999999999999988876 47999999987621 11
Q ss_pred ---------CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccC-HHHHHHHHhcCCCc
Q 024008 173 ---------ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVS-VSDYEEVLQPMGFQ 242 (274)
Q Consensus 173 ---------~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Gf~ 242 (274)
.+||+|+.......+. .++.+.|+++|.++++..++. + ..++..+ .. ||+
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g~~--------~~~~~~l~~~g~ivyvsc~p~----------t~ard~~~l-~~-~y~ 344 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSGLD--------SETEKMVQAYPRILYISCNPE----------TLCKNLETL-SQ-THK 344 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTCCC--------HHHHHHHTTSSEEEEEESCHH----------HHHHHHHHH-HH-HEE
T ss_pred cccccccccCCCCEEEECcCccccH--------HHHHHHHhCCCEEEEEECCHH----------HHHHHHHHH-hh-CcE
Confidence 3799999765544332 345556668888877764331 2 2344433 33 799
Q ss_pred EEEEeecccccCCccchhHHHHhhh
Q 024008 243 AISIVDNKLAIGPRKGREKLGRWKR 267 (274)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (274)
+..+...+. ++.-...|++.++.|
T Consensus 345 ~~~~~~~D~-FP~T~HvE~v~ll~r 368 (369)
T 3bt7_A 345 VERLALFDQ-FPYTHHMQCGVLLTA 368 (369)
T ss_dssp EEEEEEECC-STTSSCCEEEEEEEE
T ss_pred EEEEEeecc-CCCCCcEEEEEEEEe
Confidence 888877553 333445666665543
No 236
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.35 E-value=3.1e-12 Score=114.22 Aligned_cols=142 Identities=13% Similarity=0.103 Sum_probs=104.7
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC- 170 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 170 (274)
...+..++. ..++.+|||+|||+|..+..+++ ...+|+++|+++.+++.+++++...++. +.++.+|+....
T Consensus 90 s~l~a~~L~--~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~ 165 (464)
T 3m6w_A 90 AQAVGVLLD--PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAE 165 (464)
T ss_dssp THHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHH
T ss_pred HHHHHHhcC--cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhh
Confidence 444445554 45678999999999999999886 2359999999999999999999888764 899999987632
Q ss_pred -CCCCeeEEEecccc------cc-------cChh-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCH
Q 024008 171 -PTELFDLIFDYTFF------CA-------IEPE-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSV 229 (274)
Q Consensus 171 -~~~~fD~v~~~~~~------~~-------~~~~-------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 229 (274)
..++||+|++.... .. +.++ ....+++.+.++|+|||+++...++... .-..
T Consensus 166 ~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~-------eEne 238 (464)
T 3m6w_A 166 AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP-------EENE 238 (464)
T ss_dssp HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG-------GGTH
T ss_pred hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch-------hcCH
Confidence 35789999974332 11 1111 1267899999999999999987754421 1246
Q ss_pred HHHHHHHhcC-CCcEEEEe
Q 024008 230 SDYEEVLQPM-GFQAISIV 247 (274)
Q Consensus 230 ~~~~~~~~~~-Gf~~~~~~ 247 (274)
+.+..+++.+ +|+++.+.
T Consensus 239 ~vv~~~l~~~~~~~l~~~~ 257 (464)
T 3m6w_A 239 GVVAHFLKAHPEFRLEDAR 257 (464)
T ss_dssp HHHHHHHHHCTTEEEECCC
T ss_pred HHHHHHHHHCCCcEEEecc
Confidence 6777777777 58776654
No 237
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.35 E-value=1.2e-11 Score=110.94 Aligned_cols=134 Identities=13% Similarity=0.135 Sum_probs=100.7
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC--CC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---CCCCeeEEE
Q 024008 106 ALPKGRALVPGCGTGYDVVAMAS--PE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---PTELFDLIF 179 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~--~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~fD~v~ 179 (274)
..++.+|||+|||+|..+..++. .+ .+++++|+++.+++.+++++...+. .+++++.+|+.... +.++||+|+
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcchhhccCCCCEEE
Confidence 45567999999999999999887 44 6999999999999999999988776 36999999998743 336899999
Q ss_pred ecc------cccccChh-------H-------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC
Q 024008 180 DYT------FFCAIEPE-------M-------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM 239 (274)
Q Consensus 180 ~~~------~~~~~~~~-------~-------~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (274)
+.. ++...++. . ...++..+.++|+|||.+++.++..... -..+.+.++++.+
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~-------ene~~v~~~l~~~ 408 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE-------ENEKNIRWFLNVH 408 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG-------GTHHHHHHHHHHC
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh-------hHHHHHHHHHHhC
Confidence 742 22221111 0 1578999999999999999887654311 1355677778877
Q ss_pred -CCcEEEEe
Q 024008 240 -GFQAISIV 247 (274)
Q Consensus 240 -Gf~~~~~~ 247 (274)
||..+.+.
T Consensus 409 ~~~~~~~~~ 417 (450)
T 2yxl_A 409 PEFKLVPLK 417 (450)
T ss_dssp SSCEECCCC
T ss_pred CCCEEeecc
Confidence 68876543
No 238
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.35 E-value=1.9e-12 Score=112.40 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=83.8
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCC------cchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc
Q 024008 95 APIIVHLHQSGALPKGRALVPGCG------TGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD 165 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G------~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 165 (274)
...+..++.....++.+||||||| +|..+..+++ ++.+|+|+|+++.+. . ..++++|+++|
T Consensus 203 ~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~----~~~rI~fv~GD 272 (419)
T 3sso_A 203 TPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V----DELRIRTIQGD 272 (419)
T ss_dssp HHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G----CBTTEEEEECC
T ss_pred HHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h----cCCCcEEEEec
Confidence 456667776555667899999999 7776666654 578999999999862 1 12579999999
Q ss_pred cCCC-CC------CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024008 166 FFTW-CP------TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 166 ~~~~-~~------~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~ 216 (274)
+.+. .. .++||+|++... +++ .+...++++++++|||||++++.+...
T Consensus 273 a~dlpf~~~l~~~d~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 273 QNDAEFLDRIARRYGPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp TTCHHHHHHHHHHHCCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred ccccchhhhhhcccCCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 9873 22 478999998754 333 456788999999999999999987653
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.34 E-value=4.4e-12 Score=113.08 Aligned_cols=143 Identities=15% Similarity=0.052 Sum_probs=106.9
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC- 170 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 170 (274)
...+..++. ..++.+|||+|||+|..+..++. ...+|+++|+++.+++.+++++...++. ++.++.+|.....
T Consensus 94 s~l~~~~L~--~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~ 170 (456)
T 3m4x_A 94 AMIVGTAAA--AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVP 170 (456)
T ss_dssp THHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHH
T ss_pred HHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhh
Confidence 444455554 45678999999999999998886 2469999999999999999999888764 6999999987632
Q ss_pred -CCCCeeEEEecccccc---c--Chh---------------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCH
Q 024008 171 -PTELFDLIFDYTFFCA---I--EPE---------------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSV 229 (274)
Q Consensus 171 -~~~~fD~v~~~~~~~~---~--~~~---------------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 229 (274)
.++.||.|++...... + +++ ....++..+.++|+|||+++....+... .-..
T Consensus 171 ~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~-------eEne 243 (456)
T 3m4x_A 171 HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP-------EENE 243 (456)
T ss_dssp HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG-------GGTH
T ss_pred hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc-------ccCH
Confidence 3578999998654211 1 111 1137889999999999999987755421 1256
Q ss_pred HHHHHHHhcCCCcEEEEe
Q 024008 230 SDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 230 ~~~~~~~~~~Gf~~~~~~ 247 (274)
+.+..+++.+||+++.+.
T Consensus 244 ~vv~~~l~~~~~~l~~~~ 261 (456)
T 3m4x_A 244 EIISWLVENYPVTIEEIP 261 (456)
T ss_dssp HHHHHHHHHSSEEEECCC
T ss_pred HHHHHHHHhCCCEEEecc
Confidence 778888899898776654
No 240
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.34 E-value=2.8e-11 Score=107.45 Aligned_cols=99 Identities=15% Similarity=0.043 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|++++..+++. ++|+.+|+.+..+. +||+|++......
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~~-~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSVK-GFDTVIVDPPRAG 365 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCCT-TCSEEEECCCTTC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCcc-CCCEEEEcCCccc
Confidence 45679999999999999999998889999999999999999999877654 99999999986544 8999998776544
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+. ..+++.+. .|+|+|++++.+
T Consensus 366 ~~----~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 LH----PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp SC----HHHHHHHH-HHCCSEEEEEES
T ss_pred hH----HHHHHHHH-hcCCCcEEEEEC
Confidence 43 23445554 489999999876
No 241
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.28 E-value=1.1e-11 Score=110.21 Aligned_cols=132 Identities=25% Similarity=0.356 Sum_probs=96.6
Q ss_pred ccHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC
Q 024008 94 PAPIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW 169 (274)
Q Consensus 94 ~~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 169 (274)
+......++.... .++.+|||+|||+|.++..+++ .+.+++|+|+++.+++.| .+++++.+|+...
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLW 93 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGC
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhc
Confidence 3444444444443 3457999999999999999887 467999999999988766 3589999999887
Q ss_pred CCCCCeeEEEeccccccc----------ChhHH-----------------HHHHHHHHhcccCCcEEEEEEccCCCCCCC
Q 024008 170 CPTELFDLIFDYTFFCAI----------EPEMR-----------------AAWAQKIKDFLKPDGELITLMFPISDHVGG 222 (274)
Q Consensus 170 ~~~~~fD~v~~~~~~~~~----------~~~~~-----------------~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~ 222 (274)
.+.++||+|+++.++... +.+.. ..+++++.++|+|||.+++........
T Consensus 94 ~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~--- 170 (421)
T 2ih2_A 94 EPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLV--- 170 (421)
T ss_dssp CCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGT---
T ss_pred CccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhc---
Confidence 666799999998776432 12221 266899999999999988877432110
Q ss_pred CCcccCHHHHHHHHhcCCC
Q 024008 223 PPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 223 ~~~~~~~~~~~~~~~~~Gf 241 (274)
.-..+.+.+.+.+.|+
T Consensus 171 ---~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 171 ---LEDFALLREFLAREGK 186 (421)
T ss_dssp ---CGGGHHHHHHHHHHSE
T ss_pred ---CccHHHHHHHHHhcCC
Confidence 0135678888888887
No 242
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.28 E-value=3.6e-12 Score=106.83 Aligned_cols=114 Identities=15% Similarity=0.042 Sum_probs=78.8
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHh-hcCCCCcceEEE--EcccCCCCCCC
Q 024008 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELS-SSLPNAKFVSFL--KADFFTWCPTE 173 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~~~~~~ 173 (274)
+..+.+.. ..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.. .......++.++ ++|+..+. ++
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~ 147 (276)
T 2wa2_A 71 LAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PF 147 (276)
T ss_dssp HHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CC
T ss_pred HHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CC
Confidence 44444443 235679999999999999999888 7999999998 433332211 111111268999 89998744 67
Q ss_pred CeeEEEecccccccCh---hHH--HHHHHHHHhcccCCc--EEEEEEcc
Q 024008 174 LFDLIFDYTFFCAIEP---EMR--AAWAQKIKDFLKPDG--ELITLMFP 215 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~---~~~--~~~l~~l~~~L~~gG--~l~~~~~~ 215 (274)
+||+|++..+ ++... +.. ..++..+.++|+||| .+++..+.
T Consensus 148 ~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 148 QADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 8999999876 33211 111 137899999999999 98887764
No 243
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.27 E-value=3.2e-11 Score=102.32 Aligned_cols=78 Identities=17% Similarity=0.159 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.++++....+. ++++++.+|+.+... .+||+|+++.+++.
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-PKFDVCTANIPYKI 118 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-CCCSEEEEECCGGG
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-ccCCEEEEcCCccc
Confidence 4567999999999999999999888999999999999999999876554 579999999987543 47999999877664
No 244
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.27 E-value=1.9e-11 Score=102.72 Aligned_cols=115 Identities=16% Similarity=0.123 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCCc------chhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEE-EEcccCCCCCCCCee
Q 024008 107 LPKGRALVPGCGT------GYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSF-LKADFFTWCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~------G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~fD 176 (274)
.++.+|||+|||+ |. ..+++ .+.+|+|+|+++. + .++++ +++|+.+....++||
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v------~~v~~~i~gD~~~~~~~~~fD 125 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V------SDADSTLIGDCATVHTANKWD 125 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B------CSSSEEEESCGGGCCCSSCEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C------CCCEEEEECccccCCccCccc
Confidence 4567999999944 65 22332 3579999999997 1 25888 999998855557899
Q ss_pred EEEecccccc--------c-ChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 177 LIFDYTFFCA--------I-EPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 177 ~v~~~~~~~~--------~-~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
+|+++..... . .......+++.+.++|+|||.+++..+... ...++.++++..||..+.+.
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~----------~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----------WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS----------CCHHHHHHHTTEEEEEEEEE
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC----------CHHHHHHHHHHcCCcEEEEE
Confidence 9999754221 1 013346789999999999999999775432 34588899999999876664
No 245
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.26 E-value=4.7e-12 Score=105.50 Aligned_cols=117 Identities=15% Similarity=0.108 Sum_probs=80.0
Q ss_pred cHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHh-hcCCCCcceEEE--EcccCCCC
Q 024008 95 APIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELS-SSLPNAKFVSFL--KADFFTWC 170 (274)
Q Consensus 95 ~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~-~~~~~~~~v~~~--~~d~~~~~ 170 (274)
...+..+.+.. ..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.. .......++.++ ++|+....
T Consensus 60 a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 60 TAKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP 137 (265)
T ss_dssp HHHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC
Confidence 33445555443 335679999999999999999888 8999999998 432222111 001111268999 89998754
Q ss_pred CCCCeeEEEecccccccCh---hHH--HHHHHHHHhcccCCc--EEEEEEcc
Q 024008 171 PTELFDLIFDYTFFCAIEP---EMR--AAWAQKIKDFLKPDG--ELITLMFP 215 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~~~~~---~~~--~~~l~~l~~~L~~gG--~l~~~~~~ 215 (274)
+++||+|++..+ ++... +.. ..++..+.++|+||| .+++..+.
T Consensus 138 -~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 -VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 678999999876 33221 111 137899999999999 98887764
No 246
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.26 E-value=4.6e-11 Score=107.53 Aligned_cols=125 Identities=15% Similarity=0.108 Sum_probs=93.9
Q ss_pred CCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--CCCCeeEEEecc
Q 024008 108 PKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--PTELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~ 182 (274)
++.+|||+|||+|..+..+++ ....|+++|+++.+++.+++++...+.. ++.++.+|+.... ..+.||.|++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccccCCEEEECC
Confidence 678999999999999999887 2469999999999999999999877653 6999999998732 457899999843
Q ss_pred cc------cc-------cChh-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC
Q 024008 183 FF------CA-------IEPE-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 183 ~~------~~-------~~~~-------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 240 (274)
.. .. +.++ ....++..+.++|+|||++++..++.... -+.+.+..+++.++
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~-------Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQE-------ENEAVCLWLKETYP 266 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSST-------TTHHHHHHHHHHST
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcc-------cCHHHHHHHHHHCC
Confidence 22 11 1111 12468899999999999999887654311 13455666666665
No 247
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.25 E-value=9.6e-12 Score=103.48 Aligned_cols=97 Identities=13% Similarity=0.045 Sum_probs=78.4
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC--CC-CcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSL--PN-AKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
.+.+|||||||+|..+..+++.+.+++++|+++.+++.|+++++.. +. .++++++.+|..+.. ++||+|++...
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~~- 148 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQE- 148 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESSC-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECCC-
Confidence 4579999999999999988775579999999999999999876431 11 357999999998755 78999997621
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+ + ..+++.+.++|+|||++++..
T Consensus 149 ---d-p--~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 149 ---P-D--IHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ---C-C--HHHHHHHHTTEEEEEEEEEEE
T ss_pred ---C-h--HHHHHHHHHhcCCCcEEEEEc
Confidence 2 2 237899999999999998864
No 248
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.24 E-value=7.8e-11 Score=104.98 Aligned_cols=131 Identities=15% Similarity=0.090 Sum_probs=97.8
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEe
Q 024008 106 ALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFD 180 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~fD~v~~ 180 (274)
..++.+|||+|||+|..+..+++ ++.+|+++|+++.+++.+++++...+. ++.++.+|+... .+.++||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcccCCCCEEEE
Confidence 45668999999999999999987 347999999999999999999988775 478999999874 34478999997
Q ss_pred cccc------cccCh-------hH-------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC-
Q 024008 181 YTFF------CAIEP-------EM-------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM- 239 (274)
Q Consensus 181 ~~~~------~~~~~-------~~-------~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (274)
.... .+.++ .. ...++.++.++|+|||++++..++.... .....+.++++.+
T Consensus 322 D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~-------ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE-------ENSLQIKAFLQRTA 394 (429)
T ss_dssp ECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG-------GTHHHHHHHHHHCT
T ss_pred eCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh-------hHHHHHHHHHHhCC
Confidence 4332 22111 11 1478999999999999999987544211 1355677777776
Q ss_pred CCcEEE
Q 024008 240 GFQAIS 245 (274)
Q Consensus 240 Gf~~~~ 245 (274)
+|+++.
T Consensus 395 ~~~~~~ 400 (429)
T 1sqg_A 395 DAELCE 400 (429)
T ss_dssp TCEECS
T ss_pred CCEEeC
Confidence 576543
No 249
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.23 E-value=5.6e-11 Score=94.21 Aligned_cols=117 Identities=22% Similarity=0.243 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC-C----------CeEEEEeCChHHHHHHHHHhhcCCCCcceEEE-EcccCCC-----
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP-E----------RYVVGLEISDIAIKKAEELSSSLPNAKFVSFL-KADFFTW----- 169 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~-~----------~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~----- 169 (274)
.++.+|||+|||+|..+..+++. + .+|+++|+++.. .. .+++++ .+|+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHH
Confidence 45689999999999999999873 3 789999999831 11 358888 8898762
Q ss_pred ----CCCCCeeEEEecccccccC---hhH------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH
Q 024008 170 ----CPTELFDLIFDYTFFCAIE---PEM------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL 236 (274)
Q Consensus 170 ----~~~~~fD~v~~~~~~~~~~---~~~------~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (274)
.+.++||+|++...++... .+. ...++.++.++|+|||.+++..+... ...++.+.+
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~----------~~~~~~~~l 158 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS----------QSRRLQRRL 158 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG----------GGHHHHHHH
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc----------cHHHHHHHH
Confidence 2345899999976544311 111 14788999999999999999875331 235666666
Q ss_pred hcCCCcEEEE
Q 024008 237 QPMGFQAISI 246 (274)
Q Consensus 237 ~~~Gf~~~~~ 246 (274)
.. .|..+.+
T Consensus 159 ~~-~f~~v~~ 167 (196)
T 2nyu_A 159 TE-EFQNVRI 167 (196)
T ss_dssp HH-HEEEEEE
T ss_pred HH-HhcceEE
Confidence 65 3655444
No 250
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.23 E-value=1.5e-11 Score=110.04 Aligned_cols=122 Identities=16% Similarity=0.186 Sum_probs=91.7
Q ss_pred CccHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC---------------CCCeEEEEeCChHHHHHHHHHhhcCCCC
Q 024008 93 QPAPIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS---------------PERYVVGLEISDIAIKKAEELSSSLPNA 156 (274)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~---------------~~~~v~~iD~s~~~~~~a~~~~~~~~~~ 156 (274)
.|......+++.. ..++.+|||+|||+|.++..+++ .+.+++|+|+++.++..|+.++...+..
T Consensus 155 TP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 155 TPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 3444333333332 34457999999999999987765 2368999999999999999998776653
Q ss_pred c-ceEEEEcccCCCCCCCCeeEEEecccccccChh---------------HHHHHHHHHHhcccCCcEEEEEEc
Q 024008 157 K-FVSFLKADFFTWCPTELFDLIFDYTFFCAIEPE---------------MRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 157 ~-~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~---------------~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
. ++++..+|........+||+|+++.++...... ....++.++.+.|+|||++.++..
T Consensus 235 ~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 235 TDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp SSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 2 688999999875555689999999888764211 113689999999999999887763
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.23 E-value=5.4e-11 Score=104.53 Aligned_cols=113 Identities=14% Similarity=0.161 Sum_probs=87.0
Q ss_pred HHhcC-CCCCCeEEEEcCCcchhHHHhhC--CC--------------------------------------CeEEEEeCC
Q 024008 101 LHQSG-ALPKGRALVPGCGTGYDVVAMAS--PE--------------------------------------RYVVGLEIS 139 (274)
Q Consensus 101 ~~~~~-~~~~~~vLDiG~G~G~~~~~l~~--~~--------------------------------------~~v~~iD~s 139 (274)
++... ..++..|||++||+|.+++.++. .+ .+|+|+|++
T Consensus 193 ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 272 (393)
T 3k0b_A 193 LVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDID 272 (393)
T ss_dssp HHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESC
T ss_pred HHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECC
Confidence 34433 34557999999999999887765 11 469999999
Q ss_pred hHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc-cC-hhHHHHHHHHHHhcccC--CcEEEEEE
Q 024008 140 DIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA-IE-PEMRAAWAQKIKDFLKP--DGELITLM 213 (274)
Q Consensus 140 ~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~-~~-~~~~~~~l~~l~~~L~~--gG~l~~~~ 213 (274)
+.+++.|++++...++.+++++.++|+.+..+..+||+|+++..+.. +. ......+...+.+.|++ ||.+++..
T Consensus 273 ~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 273 ARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99999999999999887789999999998666679999999988753 21 13444555666666655 88888776
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.23 E-value=9.2e-11 Score=102.65 Aligned_cols=113 Identities=10% Similarity=0.167 Sum_probs=89.5
Q ss_pred HHhcC-CCCCCeEEEEcCCcchhHHHhhC--CC--------------------------------------CeEEEEeCC
Q 024008 101 LHQSG-ALPKGRALVPGCGTGYDVVAMAS--PE--------------------------------------RYVVGLEIS 139 (274)
Q Consensus 101 ~~~~~-~~~~~~vLDiG~G~G~~~~~l~~--~~--------------------------------------~~v~~iD~s 139 (274)
++... ..++..|||++||+|.+++.++. .+ .+++|+|++
T Consensus 186 ll~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid 265 (384)
T 3ldg_A 186 IILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFD 265 (384)
T ss_dssp HHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESC
T ss_pred HHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECC
Confidence 34433 34557999999999999887775 21 459999999
Q ss_pred hHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc-c-ChhHHHHHHHHHHhcccC--CcEEEEEE
Q 024008 140 DIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA-I-EPEMRAAWAQKIKDFLKP--DGELITLM 213 (274)
Q Consensus 140 ~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~-~-~~~~~~~~l~~l~~~L~~--gG~l~~~~ 213 (274)
+.+++.|++|+...++.++++|.++|+.+.....+||+|+++..+.. + +......+...+.+.|++ ||.+++..
T Consensus 266 ~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 266 GRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 99999999999999888889999999998666678999999988764 3 234556666777777766 88888876
No 253
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.23 E-value=7.9e-11 Score=103.29 Aligned_cols=113 Identities=14% Similarity=0.168 Sum_probs=88.2
Q ss_pred HHhcCC-CCCCeEEEEcCCcchhHHHhhCCC----------------------------------------CeEEEEeCC
Q 024008 101 LHQSGA-LPKGRALVPGCGTGYDVVAMASPE----------------------------------------RYVVGLEIS 139 (274)
Q Consensus 101 ~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~----------------------------------------~~v~~iD~s 139 (274)
++.... .++.+|||++||+|.+++.++..+ .+|+|+|++
T Consensus 187 ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 266 (385)
T 3ldu_A 187 LIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDID 266 (385)
T ss_dssp HHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESC
T ss_pred HHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECC
Confidence 344333 345799999999999998876521 479999999
Q ss_pred hHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc-cC-hhHHHHHHHHHHhcccC--CcEEEEEE
Q 024008 140 DIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA-IE-PEMRAAWAQKIKDFLKP--DGELITLM 213 (274)
Q Consensus 140 ~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~-~~-~~~~~~~l~~l~~~L~~--gG~l~~~~ 213 (274)
+.+++.|++++...++.++++|.++|+.+..++.+||+|+++..+.. +. .+....+...+.+.|++ |+.+++..
T Consensus 267 ~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 267 EESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 99999999999988877789999999998766679999999988753 22 23455666667777766 88877776
No 254
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.20 E-value=9.5e-12 Score=105.78 Aligned_cols=115 Identities=13% Similarity=0.084 Sum_probs=77.5
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeC----ChHHHHHHHHHhhcCCCCcceEEEEc-ccCCCC
Q 024008 97 IIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEI----SDIAIKKAEELSSSLPNAKFVSFLKA-DFFTWC 170 (274)
Q Consensus 97 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~----s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~ 170 (274)
.+..+.+.. ..++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. ....+ .++++++.+ |+....
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 70 KLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP 145 (305)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC
T ss_pred HHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC
Confidence 344444433 334579999999999999999988 68999999 554332110 11111 156999999 887653
Q ss_pred CCCCeeEEEeccccc--ccChhH--HHHHHHHHHhcccCCcEEEEEEccC
Q 024008 171 PTELFDLIFDYTFFC--AIEPEM--RAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~--~~~~~~--~~~~l~~l~~~L~~gG~l~~~~~~~ 216 (274)
.++||+|++..++. +...+. ...++..+.++|+|||.+++..+..
T Consensus 146 -~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 -PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp -CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred -cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 56899999987653 111111 1157888999999999988866544
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.18 E-value=1.1e-10 Score=96.23 Aligned_cols=87 Identities=15% Similarity=0.153 Sum_probs=66.6
Q ss_pred cHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC-
Q 024008 95 APIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT- 172 (274)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 172 (274)
...+..++.... .++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.++++.... ++++++.+|+.+....
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFPK 92 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCCS
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCccc
Confidence 344455555543 34579999999999999999998899999999999999999998643 5799999999884332
Q ss_pred -CCeeEEEeccccc
Q 024008 173 -ELFDLIFDYTFFC 185 (274)
Q Consensus 173 -~~fD~v~~~~~~~ 185 (274)
..| .|+++..++
T Consensus 93 ~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 93 NQSY-KIFGNIPYN 105 (244)
T ss_dssp SCCC-EEEEECCGG
T ss_pred CCCe-EEEEeCCcc
Confidence 345 466665554
No 256
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.14 E-value=9.9e-10 Score=95.38 Aligned_cols=162 Identities=17% Similarity=0.187 Sum_probs=110.9
Q ss_pred CCeEEEEcCCcchhHHHhhC-----------------CCCeEEEEeCChHHHHHHHHHhhcCC-----------CCcceE
Q 024008 109 KGRALVPGCGTGYDVVAMAS-----------------PERYVVGLEISDIAIKKAEELSSSLP-----------NAKFVS 160 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~-----------------~~~~v~~iD~s~~~~~~a~~~~~~~~-----------~~~~v~ 160 (274)
+.+|+|+|||+|.++..+.. +..+|..-|+.....+..-+.++... ...+.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 36899999999999877621 34689999988777666655554321 001122
Q ss_pred EEE---cccCC-CCCCCCeeEEEecccccccCh------------------------------------hHHHHHHHHHH
Q 024008 161 FLK---ADFFT-WCPTELFDLIFDYTFFCAIEP------------------------------------EMRAAWAQKIK 200 (274)
Q Consensus 161 ~~~---~d~~~-~~~~~~fD~v~~~~~~~~~~~------------------------------------~~~~~~l~~l~ 200 (274)
|+. +.+.. .+|+++||+|+++.++|+++. .++..+++..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 34433 678899999999999999851 14566789999
Q ss_pred hcccCCcEEEEEEccCCCC------------------------------------CCCCCcccCHHHHHHHHh-cCCCcE
Q 024008 201 DFLKPDGELITLMFPISDH------------------------------------VGGPPYKVSVSDYEEVLQ-PMGFQA 243 (274)
Q Consensus 201 ~~L~~gG~l~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~-~~Gf~~ 243 (274)
+.|+|||++++...+.... ..-+.|+.+.+++.++++ +.||++
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 9999999999877654321 012455679999999998 589999
Q ss_pred EEEeecccccCCccc--------hhHHHHhhhhhc
Q 024008 244 ISIVDNKLAIGPRKG--------REKLGRWKRSVR 270 (274)
Q Consensus 244 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 270 (274)
..++....+.....+ -+.+..+.|+..
T Consensus 293 ~~le~~~~~~~~~~~~~~~~~~~g~~~a~~~Ra~~ 327 (374)
T 3b5i_A 293 DKLVVYKGGSPLVVNEPDDASEVGRAFASSCRSVA 327 (374)
T ss_dssp EEEEEEECCCCCCCSSTTCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeecCCccccccchhHHHHHHHHHHHHHhc
Confidence 988876544322211 255666666643
No 257
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.13 E-value=1.9e-10 Score=96.97 Aligned_cols=88 Identities=15% Similarity=0.085 Sum_probs=71.1
Q ss_pred HHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCC
Q 024008 96 PIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTE 173 (274)
Q Consensus 96 ~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 173 (274)
..+..++.... .++.+|||||||+|.++..+++.+.+|+++|+++.+++.++++.... ++++++.+|+.+ ..+..
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGGGS
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCcccC
Confidence 34445555443 35579999999999999999998889999999999999999998633 579999999988 34445
Q ss_pred CeeEEEecccccc
Q 024008 174 LFDLIFDYTFFCA 186 (274)
Q Consensus 174 ~fD~v~~~~~~~~ 186 (274)
.||.|+++..++.
T Consensus 114 ~fD~Iv~NlPy~i 126 (295)
T 3gru_A 114 DFNKVVANLPYQI 126 (295)
T ss_dssp CCSEEEEECCGGG
T ss_pred CccEEEEeCcccc
Confidence 7999998877653
No 258
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.12 E-value=1.6e-09 Score=92.11 Aligned_cols=141 Identities=11% Similarity=0.106 Sum_probs=98.0
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC
Q 024008 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP 171 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 171 (274)
...+..++. ..++.+|||+|||+|..+..++. ...+|+++|+++.+++.+++++...+. .+++++.+|+....+
T Consensus 91 s~l~~~~l~--~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~ 167 (309)
T 2b9e_A 91 SCLPAMLLD--PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSP 167 (309)
T ss_dssp GGHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCT
T ss_pred HHHHHHHhC--CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCc
Confidence 344444554 45678999999999999998887 346999999999999999999988876 469999999987433
Q ss_pred C----CCeeEEEecccccc---c---Ch---------h-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCc
Q 024008 172 T----ELFDLIFDYTFFCA---I---EP---------E-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPY 225 (274)
Q Consensus 172 ~----~~fD~v~~~~~~~~---~---~~---------~-------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~ 225 (274)
. .+||.|++...... + ++ + ....++....++++ ||+++....+...
T Consensus 168 ~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~------- 239 (309)
T 2b9e_A 168 SDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ------- 239 (309)
T ss_dssp TCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG-------
T ss_pred cccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh-------
Confidence 2 57999997533211 1 00 0 01346777777786 8988877654421
Q ss_pred ccCHHHHHHHHhcC-C-CcEEEE
Q 024008 226 KVSVSDYEEVLQPM-G-FQAISI 246 (274)
Q Consensus 226 ~~~~~~~~~~~~~~-G-f~~~~~ 246 (274)
.-+.+.+.++++++ + |+.+.+
T Consensus 240 ~Ene~~v~~~l~~~~~~~~~~~~ 262 (309)
T 2b9e_A 240 EENEDVVRDALQQNPGAFRLAPA 262 (309)
T ss_dssp GGTHHHHHHHHTTSTTTEEECCC
T ss_pred HHhHHHHHHHHHhCCCcEEEecc
Confidence 12456677777776 4 666543
No 259
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.11 E-value=5.7e-10 Score=88.52 Aligned_cols=96 Identities=15% Similarity=0.006 Sum_probs=76.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCC--CcceEEEEcccCCC---------------
Q 024008 108 PKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPN--AKFVSFLKADFFTW--------------- 169 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~--------------- 169 (274)
+..+|||+|| |+.+..+++. +.+|+.+|.+++..+.|++++...++ .++++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 4689999998 5788888874 78999999999999999999999887 78999999996542
Q ss_pred ---------C-CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024008 170 ---------C-PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 170 ---------~-~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~ 212 (274)
. ..++||+|+.-+- .....+..+.+.|+|||+|++-
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~-------k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR-------FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS-------SHHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeCC-------CchhHHHHHHHhcCCCeEEEEe
Confidence 1 2368999995432 2235566778999999999653
No 260
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.09 E-value=1.3e-10 Score=101.71 Aligned_cols=100 Identities=13% Similarity=-0.024 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CC-CeEEEEeCChHHHHHHHHHhhcCCCCcc-eEEEEcccCCCC---CCCCeeEEEe
Q 024008 108 PKGRALVPGCGTGYDVVAMAS--PE-RYVVGLEISDIAIKKAEELSSSLPNAKF-VSFLKADFFTWC---PTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~-v~~~~~d~~~~~---~~~~fD~v~~ 180 (274)
++.+|||++||+|..++.++. .| .+|+++|+++.+++.+++|+..+++.++ ++++.+|+.... ..++||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 457999999999999998887 45 4899999999999999999999988766 999999997632 2467999997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.. +... ..+++.+.+.|++||+++++.
T Consensus 132 DP-~g~~-----~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP-FGTP-----VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC-SSCC-----HHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-CcCH-----HHHHHHHHHHhCCCCEEEEEe
Confidence 65 2211 347888899999999888876
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.09 E-value=3e-10 Score=97.64 Aligned_cols=108 Identities=18% Similarity=0.153 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCC---CC----cceEEEEcccCCCC-----CCCC
Q 024008 108 PKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLP---NA----KFVSFLKADFFTWC-----PTEL 174 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~---~~----~~v~~~~~d~~~~~-----~~~~ 174 (274)
.+.+||+||||+|..+..+++.+ .+|+++|+++.+++.|+++++..+ +. ++++++.+|..... ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 45799999999999999888743 589999999999999999986432 22 27999999998833 3578
Q ss_pred eeEEEecccc---cccChh-HHHHHHHHH----HhcccCCcEEEEEEcc
Q 024008 175 FDLIFDYTFF---CAIEPE-MRAAWAQKI----KDFLKPDGELITLMFP 215 (274)
Q Consensus 175 fD~v~~~~~~---~~~~~~-~~~~~l~~l----~~~L~~gG~l~~~~~~ 215 (274)
||+|+....- ...+.. ....+++.+ .++|+|||++++...+
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 9999986532 111100 113444444 9999999999987643
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.07 E-value=2.1e-09 Score=88.81 Aligned_cols=84 Identities=8% Similarity=0.019 Sum_probs=65.9
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----
Q 024008 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----- 171 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----- 171 (274)
+..++... ..++.+|||||||+|..+..+++.+.+|+++|+++.+++.++++.... ++++++.+|+.+...
T Consensus 18 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~---~~v~~i~~D~~~~~~~~~~~ 94 (255)
T 3tqs_A 18 LQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQ---KNITIYQNDALQFDFSSVKT 94 (255)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTC---TTEEEEESCTTTCCGGGSCC
T ss_pred HHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhC---CCcEEEEcchHhCCHHHhcc
Confidence 33344433 345679999999999999999998899999999999999999998652 579999999988422
Q ss_pred CCCeeEEEeccccc
Q 024008 172 TELFDLIFDYTFFC 185 (274)
Q Consensus 172 ~~~fD~v~~~~~~~ 185 (274)
.++|| |+++..+.
T Consensus 95 ~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 95 DKPLR-VVGNLPYN 107 (255)
T ss_dssp SSCEE-EEEECCHH
T ss_pred CCCeE-EEecCCcc
Confidence 34688 66665554
No 263
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.07 E-value=7.2e-10 Score=92.40 Aligned_cols=96 Identities=14% Similarity=0.034 Sum_probs=72.4
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC--C
Q 024008 97 IIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT--E 173 (274)
Q Consensus 97 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~ 173 (274)
.+..+++.. ..++ +|||||||+|..+..+++.+.+|+++|+++.+++.++++... .+++++.+|+.+.... .
T Consensus 35 i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~~~~ 109 (271)
T 3fut_A 35 HLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWEEVP 109 (271)
T ss_dssp HHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGGGSC
T ss_pred HHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChhhcc
Confidence 344444433 3445 999999999999999999889999999999999999999863 4799999999874332 3
Q ss_pred CeeEEEecccccccChhHHHHHHHH
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQK 198 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~ 198 (274)
.+|.|+++..++ +..+....++..
T Consensus 110 ~~~~iv~NlPy~-iss~il~~ll~~ 133 (271)
T 3fut_A 110 QGSLLVANLPYH-IATPLVTRLLKT 133 (271)
T ss_dssp TTEEEEEEECSS-CCHHHHHHHHHH
T ss_pred CccEEEecCccc-ccHHHHHHHhcC
Confidence 689999887766 443444444433
No 264
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.05 E-value=1.9e-11 Score=100.74 Aligned_cols=111 Identities=14% Similarity=0.139 Sum_probs=81.3
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-C-CCC
Q 024008 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-P-TEL 174 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~-~~~ 174 (274)
+..++.... .++.+|||+|||+|..+..+++.+.+++|+|+++.+++.++++... .++++++.+|+.+.. + .++
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~~~~~~~~ 94 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL---NTRVTLIHQDILQFQFPNKQR 94 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT---CSEEEECCSCCTTTTCCCSSE
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhcc---CCceEEEECChhhcCcccCCC
Confidence 344444443 3457999999999999999998889999999999999999887652 257999999998843 3 257
Q ss_pred eeEEEecccccccChhHHHHHH--------------HHHHhcccCCcEEEEEE
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWA--------------QKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l--------------~~l~~~L~~gG~l~~~~ 213 (274)
| .|+++..+.. .......++ +.+.++|+|||.+.+..
T Consensus 95 f-~vv~n~Py~~-~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 95 Y-KIVGNIPYHL-STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp E-EEEEECCSSS-CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred c-EEEEeCCccc-cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 8 6777665543 223333333 56889999999876643
No 265
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.04 E-value=3.1e-09 Score=92.39 Aligned_cols=142 Identities=11% Similarity=0.106 Sum_probs=97.2
Q ss_pred CCeEEEEcCCcchhHHHhhC-------------------CCCeEEEEeCC-----------hHHHHHHHHHhhcCCCCcc
Q 024008 109 KGRALVPGCGTGYDVVAMAS-------------------PERYVVGLEIS-----------DIAIKKAEELSSSLPNAKF 158 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~-------------------~~~~v~~iD~s-----------~~~~~~a~~~~~~~~~~~~ 158 (274)
..+|+|+||++|.++..+.. +..+|+.-|+. +...+.+++.. +...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~---g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN---GRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT---CCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc---cCCCC
Confidence 46899999999999876543 12478888987 44333332221 11112
Q ss_pred eEEEEcccCC----CCCCCCeeEEEecccccccChh-------------------------------------HHHHHHH
Q 024008 159 VSFLKADFFT----WCPTELFDLIFDYTFFCAIEPE-------------------------------------MRAAWAQ 197 (274)
Q Consensus 159 v~~~~~d~~~----~~~~~~fD~v~~~~~~~~~~~~-------------------------------------~~~~~l~ 197 (274)
.-|+.+.... ++|.+++|+|+++.++|+++.. ++..+++
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4555554433 6788999999999999997421 1123367
Q ss_pred HHHhcccCCcEEEEEEccCCCC--C----------------------------CCCCcccCHHHHHHHHhcCC-CcEEEE
Q 024008 198 KIKDFLKPDGELITLMFPISDH--V----------------------------GGPPYKVSVSDYEEVLQPMG-FQAISI 246 (274)
Q Consensus 198 ~l~~~L~~gG~l~~~~~~~~~~--~----------------------------~~~~~~~~~~~~~~~~~~~G-f~~~~~ 246 (274)
...+.|+|||++++...+.... . .-|.++.+.+|+.++++..| |++..+
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 7799999999999988766443 1 12456679999999999985 888888
Q ss_pred eeccccc
Q 024008 247 VDNKLAI 253 (274)
Q Consensus 247 ~~~~~~~ 253 (274)
+......
T Consensus 290 e~~~~~~ 296 (384)
T 2efj_A 290 ETFNAPY 296 (384)
T ss_dssp EEEEEET
T ss_pred EEEeecc
Confidence 7655433
No 266
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.03 E-value=4.2e-10 Score=98.35 Aligned_cols=99 Identities=15% Similarity=-0.031 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcC---------------CCCcceEEEEcccCCCC
Q 024008 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSL---------------PNAKFVSFLKADFFTWC 170 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~---------------~~~~~v~~~~~d~~~~~ 170 (274)
++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..+ ++. +++++.+|+....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 5679999999999999988873 458999999999999999999877 654 3999999997632
Q ss_pred --CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 171 --PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 171 --~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
..+.||+|+... +... ..+++.+.+.|++||++++..
T Consensus 126 ~~~~~~fD~I~lDP-~~~~-----~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDP-FGSP-----MEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECC-SSCC-----HHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCC-CCCH-----HHHHHHHHHhcCCCCEEEEEe
Confidence 135799999543 3321 367888999999999888765
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.03 E-value=9.5e-11 Score=97.21 Aligned_cols=79 Identities=14% Similarity=0.064 Sum_probs=65.2
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCCh-------HHHHHHHHHhhcCCCCcceEEEEcccCCCC---CC--CCe
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISD-------IAIKKAEELSSSLPNAKFVSFLKADFFTWC---PT--ELF 175 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~-------~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~--~~f 175 (274)
++.+|||+|||+|..+..++..+.+|+++|+++ .+++.|+++...++..++++++.+|+.+.. ++ ++|
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 457999999999999999999889999999999 999999988766554456999999998732 22 689
Q ss_pred eEEEecccccc
Q 024008 176 DLIFDYTFFCA 186 (274)
Q Consensus 176 D~v~~~~~~~~ 186 (274)
|+|++...+.+
T Consensus 163 D~V~~dP~~~~ 173 (258)
T 2r6z_A 163 DIVYLDPMYPE 173 (258)
T ss_dssp SEEEECCCC--
T ss_pred cEEEECCCCCC
Confidence 99999877655
No 268
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.02 E-value=3.4e-09 Score=91.39 Aligned_cols=161 Identities=14% Similarity=0.164 Sum_probs=112.1
Q ss_pred CeEEEEcCCcchhHHHhhCC------------------CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEE---cccCC
Q 024008 110 GRALVPGCGTGYDVVAMASP------------------ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLK---ADFFT 168 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~------------------~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~ 168 (274)
.+|+|+||++|.+++.+... ..+|+.-|+.....+.+.+.++......+.-|+. +.+..
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 68999999999988655432 3589999999888888887776421101234444 44443
Q ss_pred -CCCCCCeeEEEecccccccCh-------------------------------hHHHHHHHHHHhcccCCcEEEEEEccC
Q 024008 169 -WCPTELFDLIFDYTFFCAIEP-------------------------------EMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 169 -~~~~~~fD~v~~~~~~~~~~~-------------------------------~~~~~~l~~l~~~L~~gG~l~~~~~~~ 216 (274)
++|.+++|+|+++.++|+++. .++..+++...+.|+|||++++...+.
T Consensus 133 rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 133 RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 788899999999999998742 134566899999999999999877655
Q ss_pred CCCC----------------------------------CCCCcccCHHHHHHHHhcCC-CcEEEEeecccccCCc-----
Q 024008 217 SDHV----------------------------------GGPPYKVSVSDYEEVLQPMG-FQAISIVDNKLAIGPR----- 256 (274)
Q Consensus 217 ~~~~----------------------------------~~~~~~~~~~~~~~~~~~~G-f~~~~~~~~~~~~~~~----- 256 (274)
.... .-|.++.+.+|+.+.++..| |++..++.......+.
T Consensus 213 ~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d 292 (359)
T 1m6e_X 213 RSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGD 292 (359)
T ss_dssp SSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTT
T ss_pred CCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhh
Confidence 3320 12456678999999999996 5877776544333221
Q ss_pred ------cchhHHHHhhhhhc
Q 024008 257 ------KGREKLGRWKRSVR 270 (274)
Q Consensus 257 ------~~~~~~~~~~~~~~ 270 (274)
..-+.+..|.|+..
T Consensus 293 ~~~~~~~~g~~~a~~~Ra~~ 312 (359)
T 1m6e_X 293 GGGSVEEEGYNVARCMRAVA 312 (359)
T ss_dssp CCSSTTTTTTHHHHHHHHHH
T ss_pred hhhhhhHhHhHhhhhhhhhc
Confidence 11256777777643
No 269
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.99 E-value=6.4e-10 Score=97.56 Aligned_cols=88 Identities=20% Similarity=0.133 Sum_probs=70.4
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC--CCCcceEEEEcccCCCCC--
Q 024008 96 PIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSL--PNAKFVSFLKADFFTWCP-- 171 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~-- 171 (274)
..+..+......++.+|||+|||+|..+..+++.+.+|+++|+++.+++.|++++... ++ ++++++++|+.+..+
T Consensus 81 e~vA~~~a~~l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~ 159 (410)
T 3ll7_A 81 AVTSSYKSRFIREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLI 159 (410)
T ss_dssp HHHHHHGGGGSCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhc
Confidence 3344443332234789999999999999999998899999999999999999999866 65 679999999987422
Q ss_pred -CCCeeEEEecccc
Q 024008 172 -TELFDLIFDYTFF 184 (274)
Q Consensus 172 -~~~fD~v~~~~~~ 184 (274)
.++||+|++....
T Consensus 160 ~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 160 KTFHPDYIYVDPAR 173 (410)
T ss_dssp HHHCCSEEEECCEE
T ss_pred cCCCceEEEECCCC
Confidence 3589999997554
No 270
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.97 E-value=1.3e-09 Score=100.35 Aligned_cols=100 Identities=22% Similarity=0.206 Sum_probs=78.1
Q ss_pred CeEEEEcCCcchhHHHhhC----CCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024008 110 GRALVPGCGTGYDVVAMAS----PER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~----~~~--~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 183 (274)
..|||+|||+|.+....++ .+. +|++||.++ +...+++....+++.++|+++.+|+.+...++++|+|++=..
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwM 437 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELL 437 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCC
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcC
Confidence 4799999999999544333 233 789999998 566788888888888999999999999777799999998544
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEE
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~ 210 (274)
=..+..+....++....+.|||||+++
T Consensus 438 G~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 438 GSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp BTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cccccccCCHHHHHHHHHhcCCCcEEc
Confidence 333333334468888899999999976
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.94 E-value=4.5e-09 Score=96.06 Aligned_cols=108 Identities=14% Similarity=0.064 Sum_probs=84.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhC----C----------------CCeEEEEeCChHHHHHHHHHhhcCCCCc----ceEEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS----P----------------ERYVVGLEISDIAIKKAEELSSSLPNAK----FVSFL 162 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~----~----------------~~~v~~iD~s~~~~~~a~~~~~~~~~~~----~v~~~ 162 (274)
.++.+|||++||+|.++..+++ . ..+++|+|+++.++..|+.++...+... ++.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 3457999999999999877764 1 1379999999999999999987766543 27899
Q ss_pred EcccCCC--CCCCCeeEEEecccccccCh------------hHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 163 KADFFTW--CPTELFDLIFDYTFFCAIEP------------EMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 163 ~~d~~~~--~~~~~fD~v~~~~~~~~~~~------------~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.+|.... ....+||+|+++.++..... ..-..++.++.+.|+|||++.++..
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 9998762 33568999999988765321 1123689999999999999888763
No 272
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.93 E-value=8.2e-10 Score=100.84 Aligned_cols=145 Identities=20% Similarity=0.139 Sum_probs=99.4
Q ss_pred CccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCC-----------------CCeEEEEeCChHHHHHHHHHhhcCCC
Q 024008 93 QPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASP-----------------ERYVVGLEISDIAIKKAEELSSSLPN 155 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-----------------~~~v~~iD~s~~~~~~a~~~~~~~~~ 155 (274)
+|......++........+|||.+||+|.++..+++. ...++|+|+++.++..|+.++...+.
T Consensus 229 TP~~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 308 (544)
T 3khk_A 229 TPKSIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI 308 (544)
T ss_dssp CCHHHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC
Confidence 4444444444443333459999999999998776430 45899999999999999999887776
Q ss_pred CcceEEEEcccCCC--CCCCCeeEEEeccccccc-------------------------Chh--HHHHHHHHHHhcccCC
Q 024008 156 AKFVSFLKADFFTW--CPTELFDLIFDYTFFCAI-------------------------EPE--MRAAWAQKIKDFLKPD 206 (274)
Q Consensus 156 ~~~v~~~~~d~~~~--~~~~~fD~v~~~~~~~~~-------------------------~~~--~~~~~l~~l~~~L~~g 206 (274)
..++.+..+|.... .+..+||+|+++.++..- ++. .--.++.++.+.|+||
T Consensus 309 ~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g 388 (544)
T 3khk_A 309 DFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPT 388 (544)
T ss_dssp CCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEE
T ss_pred CcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccC
Confidence 55555588887752 345789999999888641 110 0125889999999999
Q ss_pred cEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCC
Q 024008 207 GELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 207 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf 241 (274)
|++.++......... ......+++.+.+.+.
T Consensus 389 Gr~aiVlP~g~L~~~----~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 389 GSMALLLANGSMSSN----TNNEGEIRKTLVEQDL 419 (544)
T ss_dssp EEEEEEEETHHHHCC----GGGHHHHHHHHHHTTC
T ss_pred ceEEEEecchhhhcC----cchHHHHHHHHHhCCc
Confidence 998877632210000 0135677777777665
No 273
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.92 E-value=5.8e-09 Score=98.14 Aligned_cols=108 Identities=14% Similarity=0.117 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--------------------------------------------CCeEEEEeCChHH
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--------------------------------------------ERYVVGLEISDIA 142 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--------------------------------------------~~~v~~iD~s~~~ 142 (274)
.++..|||++||+|.+++.++.. ..+++|+|+++.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 35579999999999998876641 1479999999999
Q ss_pred HHHHHHHhhcCCCCcceEEEEcccCCCCCC---CCeeEEEecccccc-c-ChhHHHHHH---HHHHhcccCCcEEEEEEc
Q 024008 143 IKKAEELSSSLPNAKFVSFLKADFFTWCPT---ELFDLIFDYTFFCA-I-EPEMRAAWA---QKIKDFLKPDGELITLMF 214 (274)
Q Consensus 143 ~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~fD~v~~~~~~~~-~-~~~~~~~~l---~~l~~~L~~gG~l~~~~~ 214 (274)
++.|+.|+...++.+.++|.++|+.+..++ ++||+|+++.++.. + +......+. .++.+.+.|||.+++...
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 999999999999888899999999874322 38999999988864 2 122333333 444555568999888763
No 274
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.88 E-value=4.1e-09 Score=89.17 Aligned_cols=75 Identities=19% Similarity=0.119 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---C---CCCeeEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---P---TELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~---~~~fD~v 178 (274)
.++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|++++...+ ++++++++|+.... . .++||.|
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 45689999999999999999883 6799999999999999999988765 57999999987632 1 1579999
Q ss_pred Eeccc
Q 024008 179 FDYTF 183 (274)
Q Consensus 179 ~~~~~ 183 (274)
++...
T Consensus 103 l~D~g 107 (301)
T 1m6y_A 103 LMDLG 107 (301)
T ss_dssp EEECS
T ss_pred EEcCc
Confidence 97554
No 275
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.87 E-value=1.5e-09 Score=89.87 Aligned_cols=127 Identities=21% Similarity=0.236 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCcchhHHHhhC---------C-----CCeEEEEeCCh---HHHH-----------HHHHHhhcCC-----
Q 024008 108 PKGRALVPGCGTGYDVVAMAS---------P-----ERYVVGLEISD---IAIK-----------KAEELSSSLP----- 154 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~---------~-----~~~v~~iD~s~---~~~~-----------~a~~~~~~~~----- 154 (274)
++.+|||+|+|+|.++..+++ + ..+++++|..| +.+. .|+++...+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 446999999999999876532 2 14899999876 3333 5565544311
Q ss_pred -----C---CcceEEEEcccCCCCC---C---CCeeEEEecccccccChhH-HHHHHHHHHhcccCCcEEEEEEccCCCC
Q 024008 155 -----N---AKFVSFLKADFFTWCP---T---ELFDLIFDYTFFCAIEPEM-RAAWAQKIKDFLKPDGELITLMFPISDH 219 (274)
Q Consensus 155 -----~---~~~v~~~~~d~~~~~~---~---~~fD~v~~~~~~~~~~~~~-~~~~l~~l~~~L~~gG~l~~~~~~~~~~ 219 (274)
+ ..+++++.+|+.+..+ . ..||+|+.-..-..-.++. ...+++.+.++|+|||+++...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys------ 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------ 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC------
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe------
Confidence 1 1467899999876222 2 2799999643111111111 2568899999999999988633
Q ss_pred CCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 220 VGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
....+...+..+||.+..+..
T Consensus 214 --------aa~~vrr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 214 --------SAGFVRRGLQEAGFTMQKRKG 234 (257)
T ss_dssp --------CBHHHHHHHHHHTEEEEEECC
T ss_pred --------CCHHHHHHHHHCCCEEEeCCC
Confidence 235788889999999876544
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.86 E-value=2.3e-09 Score=98.72 Aligned_cols=100 Identities=17% Similarity=0.083 Sum_probs=75.2
Q ss_pred CeEEEEcCCcchhHHHhhC----CC-----------CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC---
Q 024008 110 GRALVPGCGTGYDVVAMAS----PE-----------RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--- 171 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~----~~-----------~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--- 171 (274)
..|||+|||+|.+....++ .+ .+|++||.++.++...+.... +++.++|+++.+|+.+...
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhcccccc
Confidence 5799999999999643221 22 399999999988766666554 6677889999999998433
Q ss_pred ---CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEE
Q 024008 172 ---TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 172 ---~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~ 210 (274)
.+++|+|++=..=..++.+.....+..+.+.|+|||+++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 689999998655333344445567777889999999876
No 277
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.82 E-value=1.1e-08 Score=84.33 Aligned_cols=83 Identities=7% Similarity=0.085 Sum_probs=62.3
Q ss_pred HHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC-
Q 024008 97 IIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE- 173 (274)
Q Consensus 97 ~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~- 173 (274)
.+..+++... .++.+|||+|||+|..+..+++.+ .+++++|+++.+++.++++ . ..+++++.+|+.+.....
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~~~ 93 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFCSL 93 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGGGS
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChhHc
Confidence 3444555443 356799999999999999999985 7999999999999999887 2 257999999998843222
Q ss_pred --CeeEEEeccccc
Q 024008 174 --LFDLIFDYTFFC 185 (274)
Q Consensus 174 --~fD~v~~~~~~~ 185 (274)
.+ .|+++..++
T Consensus 94 ~~~~-~vv~NlPy~ 106 (249)
T 3ftd_A 94 GKEL-KVVGNLPYN 106 (249)
T ss_dssp CSSE-EEEEECCTT
T ss_pred cCCc-EEEEECchh
Confidence 33 566555544
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.80 E-value=1.7e-08 Score=92.03 Aligned_cols=130 Identities=13% Similarity=-0.016 Sum_probs=94.4
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-----CCeEEEEeCChHHHHHHHHHhhcCCCC-cceEEEEcccCCC----CCCCCeeE
Q 024008 108 PKGRALVPGCGTGYDVVAMASP-----ERYVVGLEISDIAIKKAEELSSSLPNA-KFVSFLKADFFTW----CPTELFDL 177 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-----~~~v~~iD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~----~~~~~fD~ 177 (274)
++.+|||.+||+|.++..+++. ...++|+|+++.++..|+.++...+.. +++.+..+|.... ....+||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 4579999999999998777652 468999999999999999998777764 4688999998864 23578999
Q ss_pred EEeccccccc-Ch------h--------------HHHHHHHHHHhccc-CCcEEEEEEccCCCCCCCCCcccCHHHHHHH
Q 024008 178 IFDYTFFCAI-EP------E--------------MRAAWAQKIKDFLK-PDGELITLMFPISDHVGGPPYKVSVSDYEEV 235 (274)
Q Consensus 178 v~~~~~~~~~-~~------~--------------~~~~~l~~l~~~L~-~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (274)
|+++.++..- .. + .--.++.++.+.|+ +||++.++..+...... .....+++.
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~-----~~~~~iRk~ 375 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRG-----NAEGTIRKA 375 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCC-----THHHHHHHH
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCC-----chhHHHHHH
Confidence 9999877421 00 0 00248899999999 99998877643211000 024667777
Q ss_pred HhcCCCc
Q 024008 236 LQPMGFQ 242 (274)
Q Consensus 236 ~~~~Gf~ 242 (274)
+.+.+.-
T Consensus 376 Lle~~~l 382 (542)
T 3lkd_A 376 LLEEGAI 382 (542)
T ss_dssp HHHTTCE
T ss_pred HHhCCce
Confidence 7776553
No 279
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.80 E-value=2.2e-08 Score=83.85 Aligned_cols=83 Identities=13% Similarity=0.014 Sum_probs=61.3
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCe----EEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC
Q 024008 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERY----VVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT 172 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~----v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 172 (274)
+..++... ..++.+|||||||+|.++..+++.+.. |+++|+++.+++.++++. ..+++++.+|+.+....
T Consensus 31 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 31 IDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFDFG 105 (279)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCCGG
T ss_pred HHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCChh
Confidence 33444433 345679999999999999999986665 999999999999999984 25799999999873321
Q ss_pred C-------CeeEEEeccccc
Q 024008 173 E-------LFDLIFDYTFFC 185 (274)
Q Consensus 173 ~-------~fD~v~~~~~~~ 185 (274)
. ....|+++..+.
T Consensus 106 ~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 106 SIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp GGSCSSSSCCEEEEEECCHH
T ss_pred HhcccccCCceEEEEccCcc
Confidence 1 234566655544
No 280
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.78 E-value=2.7e-08 Score=83.22 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhC-C-CCeEEEEeCChHHHHHHHHHhhcC--C--CCcceEEEEcccCCCC--CCCCeeEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS-P-ERYVVGLEISDIAIKKAEELSSSL--P--NAKFVSFLKADFFTWC--PTELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~-~-~~~v~~iD~s~~~~~~a~~~~~~~--~--~~~~v~~~~~d~~~~~--~~~~fD~v 178 (274)
..+.+||-||.|.|..+..+++ + ..+|+.+|+++.+++.+++.++.. + ..++++++.+|..... ..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4468999999999999999988 3 459999999999999999987531 1 2478999999999843 35689999
Q ss_pred EecccccccChh--HHHHHHHHHHhcccCCcEEEEEE
Q 024008 179 FDYTFFCAIEPE--MRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 179 ~~~~~~~~~~~~--~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+.-..=..-+.. ....+++.+.+.|+|||+++.-.
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 964321100000 11467899999999999998865
No 281
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.76 E-value=1.2e-08 Score=75.58 Aligned_cols=97 Identities=13% Similarity=0.003 Sum_probs=68.0
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcc-hhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC--
Q 024008 97 IIVHLHQSGALPKGRALVPGCGTG-YDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT-- 172 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~vLDiG~G~G-~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-- 172 (274)
.+.+++.....++.+|||+|||.| ..+..|++ .|..|+++|+++.+++ +++.|++++...
T Consensus 24 ~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~~~Y 87 (153)
T 2k4m_A 24 DLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRMEIY 87 (153)
T ss_dssp HHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCHHHH
T ss_pred HHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCccccc
Confidence 455555444455689999999999 69999997 9999999999987444 899999985543
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024008 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~ 216 (274)
..||+|++...-. ++...+-++.+.+ |.-+++..++.
T Consensus 88 ~~~DLIYsirPP~-----El~~~i~~lA~~v--~adliI~pL~~ 124 (153)
T 2k4m_A 88 RGAALIYSIRPPA-----EIHSSLMRVADAV--GARLIIKPLTG 124 (153)
T ss_dssp TTEEEEEEESCCT-----TTHHHHHHHHHHH--TCEEEEECBTT
T ss_pred CCcCEEEEcCCCH-----HHHHHHHHHHHHc--CCCEEEEcCCC
Confidence 5899998765433 2233344444433 56666665544
No 282
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.72 E-value=3.5e-09 Score=87.47 Aligned_cols=78 Identities=15% Similarity=0.058 Sum_probs=61.2
Q ss_pred CeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhc-------CC-CCcceEEEEcccCCCCC--CCCeeEEE
Q 024008 110 GRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSS-------LP-NAKFVSFLKADFFTWCP--TELFDLIF 179 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~-------~~-~~~~v~~~~~d~~~~~~--~~~fD~v~ 179 (274)
.+|||+|||+|..+..++..|.+|+++|.++.+++.+++++.. ++ ...+++++.+|..+..+ ..+||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 7999999999999999999888999999999876666655432 11 22479999999877322 24799999
Q ss_pred eccccccc
Q 024008 180 DYTFFCAI 187 (274)
Q Consensus 180 ~~~~~~~~ 187 (274)
+...+..-
T Consensus 170 lDP~y~~~ 177 (258)
T 2oyr_A 170 LDPMFPHK 177 (258)
T ss_dssp ECCCCCCC
T ss_pred EcCCCCCc
Confidence 99888653
No 283
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.69 E-value=1.3e-08 Score=83.95 Aligned_cols=74 Identities=11% Similarity=-0.029 Sum_probs=57.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCe--EEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC------CCeeEE
Q 024008 107 LPKGRALVPGCGTGYDVVAMASPERY--VVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT------ELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~--v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~fD~v 178 (274)
.++.+|||||||+|..+. +.+ +.+ |+++|+++.+++.++++.... ++++++.+|+.+.... +..+.|
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~~~~~~~~~v 94 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELAEKMGQPLRV 94 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHHHHHTSCEEE
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhhcccCCceEE
Confidence 455799999999999999 654 456 999999999999999887543 4799999999874221 234678
Q ss_pred Eeccccc
Q 024008 179 FDYTFFC 185 (274)
Q Consensus 179 ~~~~~~~ 185 (274)
+++..+.
T Consensus 95 vsNlPY~ 101 (252)
T 1qyr_A 95 FGNLPYN 101 (252)
T ss_dssp EEECCTT
T ss_pred EECCCCC
Confidence 8776654
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.62 E-value=2.4e-07 Score=86.79 Aligned_cols=137 Identities=10% Similarity=0.066 Sum_probs=89.1
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-----CCeEEEEeCChHHHHHH--HHHhhcCCCC---cceEEEEcccCC--CCCCCCe
Q 024008 108 PKGRALVPGCGTGYDVVAMASP-----ERYVVGLEISDIAIKKA--EELSSSLPNA---KFVSFLKADFFT--WCPTELF 175 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-----~~~v~~iD~s~~~~~~a--~~~~~~~~~~---~~v~~~~~d~~~--~~~~~~f 175 (274)
++.+|||+|||+|.++..+++. ..+++|+|+++.++..| +.++..+... ....+...|+.. .....+|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 4679999999999999988762 24799999999999999 6665442221 123556666665 2245689
Q ss_pred eEEEecccccc-cC-hh-------------------------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccC
Q 024008 176 DLIFDYTFFCA-IE-PE-------------------------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVS 228 (274)
Q Consensus 176 D~v~~~~~~~~-~~-~~-------------------------~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~ 228 (274)
|+|+++.++.. .. +. ....++.++.+.|++||++.++.........+ ..
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg----~~ 476 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQG----NE 476 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCS----HH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCC----hH
Confidence 99999998843 11 11 12347888999999999988877332110000 01
Q ss_pred HHHHHHHHhcCCCcEEEEeec
Q 024008 229 VSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 229 ~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
...+.+.+.+. +.+..+...
T Consensus 477 ~kkLRk~LLe~-~~I~aIIdL 496 (878)
T 3s1s_A 477 SKAFREFLVGN-FGLEHIFLY 496 (878)
T ss_dssp HHHHHHHHTTT-TCEEEEEEC
T ss_pred HHHHHHHHHhC-CCeEEEEEC
Confidence 45677766654 344444443
No 285
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.50 E-value=3e-07 Score=76.75 Aligned_cols=125 Identities=12% Similarity=0.027 Sum_probs=90.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhC-------CCCeEEEEeCCh--------------------------HHHHHHHHHhhcC
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS-------PERYVVGLEISD--------------------------IAIKKAEELSSSL 153 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~-------~~~~v~~iD~s~--------------------------~~~~~a~~~~~~~ 153 (274)
..++.|||+|+..|..+..++. ++.+++++|... ..++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 4568999999999999988765 267899999642 1467789999888
Q ss_pred CC-CcceEEEEcccCCCC---CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCH
Q 024008 154 PN-AKFVSFLKADFFTWC---PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSV 229 (274)
Q Consensus 154 ~~-~~~v~~~~~d~~~~~---~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 229 (274)
++ .++++++.+|+.+.. +.++||+|+.-.-. ......+++.+...|+|||+|++-++.. +.-..
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~----y~~~~~~Le~~~p~L~pGGiIv~DD~~~--------~~G~~ 252 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL----YESTWDTLTNLYPKVSVGGYVIVDDYMM--------CPPCK 252 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS----HHHHHHHHHHHGGGEEEEEEEEESSCTT--------CHHHH
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc----cccHHHHHHHHHhhcCCCEEEEEcCCCC--------CHHHH
Confidence 87 388999999997732 34689999954321 1234578899999999999988866421 11135
Q ss_pred HHHHHHHhcCCCcE
Q 024008 230 SDYEEVLQPMGFQA 243 (274)
Q Consensus 230 ~~~~~~~~~~Gf~~ 243 (274)
.-+.++.+..|+..
T Consensus 253 ~Av~Ef~~~~~i~~ 266 (282)
T 2wk1_A 253 DAVDEYRAKFDIAD 266 (282)
T ss_dssp HHHHHHHHHTTCCS
T ss_pred HHHHHHHHhcCCce
Confidence 56677777777553
No 286
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.50 E-value=2.6e-07 Score=79.76 Aligned_cols=131 Identities=18% Similarity=0.181 Sum_probs=90.3
Q ss_pred CCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCC-------CCcceEEEEcccCCCC-----CCCC
Q 024008 108 PKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLP-------NAKFVSFLKADFFTWC-----PTEL 174 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~-------~~~~v~~~~~d~~~~~-----~~~~ 174 (274)
++.+||=||.|.|..+..+++ +..+++.+|+++.+++.+++.++... ..++++++.+|..... ..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 457999999999999999988 55689999999999999999875421 1246899999987632 3468
Q ss_pred eeEEEeccccc-------ccCh-hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024008 175 FDLIFDYTFFC-------AIEP-EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 175 fD~v~~~~~~~-------~~~~-~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 246 (274)
||+|+.-..-. .... --...+++.+.+.|+|||+++.-.-.+ .+.-....+.+.+++. |..+.+
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~-------~~~~~~~~i~~tl~~v-F~~v~~ 356 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV-------NLTEALSLYEEQLGRL-YCPVEF 356 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET-------TCHHHHHHHHHHHTTS-SSCEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCC-------cchhHHHHHHHHHHHh-CCcceE
Confidence 99999642211 0111 123577899999999999988754222 1111245666777776 444443
No 287
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.46 E-value=1.5e-06 Score=71.34 Aligned_cols=121 Identities=17% Similarity=0.112 Sum_probs=74.7
Q ss_pred CccHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC-CC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-
Q 024008 93 QPAPIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP-ER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT- 168 (274)
Q Consensus 93 ~~~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 168 (274)
...-.+.++.+... .++.+|||+|||+|.++..+++. +. .++++|+.-......... ...+ .++..+..++..
T Consensus 58 RaA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~dv~ 134 (277)
T 3evf_A 58 RGTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKTDIH 134 (277)
T ss_dssp THHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSCCTT
T ss_pred cHHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC--CCeEEEeccceeh
Confidence 34455666665543 34579999999999999988763 44 788888874321000000 0001 134445555432
Q ss_pred CCCCCCeeEEEeccccc----ccChhHHHHHHHHHHhcccCC-cEEEEEEccC
Q 024008 169 WCPTELFDLIFDYTFFC----AIEPEMRAAWAQKIKDFLKPD-GELITLMFPI 216 (274)
Q Consensus 169 ~~~~~~fD~v~~~~~~~----~~~~~~~~~~l~~l~~~L~~g-G~l~~~~~~~ 216 (274)
..+.++||+|++..+.. ..+....-.+++.+.++|+|| |.+++-.|.+
T Consensus 135 ~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 135 RLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp TSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred hcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 34567899999987665 222111123468889999999 9999987763
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.40 E-value=1.6e-06 Score=71.74 Aligned_cols=82 Identities=16% Similarity=0.104 Sum_probs=64.4
Q ss_pred CccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---
Q 024008 93 QPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--- 169 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--- 169 (274)
.....+.+.+. ..+++.+||++||.|..+..+++.+.+|+|+|.++.+++.|++ +.. ++++++.+|+.+.
T Consensus 9 VLl~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~ 81 (285)
T 1wg8_A 9 VLYQEALDLLA--VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRH 81 (285)
T ss_dssp TTHHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHH
T ss_pred HHHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHH
Confidence 33344444443 4567899999999999999999888899999999999999998 644 4799999999873
Q ss_pred ---CCCCCeeEEEec
Q 024008 170 ---CPTELFDLIFDY 181 (274)
Q Consensus 170 ---~~~~~fD~v~~~ 181 (274)
...+++|.|++.
T Consensus 82 L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 82 LAALGVERVDGILAD 96 (285)
T ss_dssp HHHTTCSCEEEEEEE
T ss_pred HHHcCCCCcCEEEeC
Confidence 122579999964
No 289
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.38 E-value=2.2e-06 Score=74.04 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=90.4
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCC-----CcceEEEEcccCCC--CCCCCee
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPN-----AKFVSFLKADFFTW--CPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~iD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~--~~~~~fD 176 (274)
..++.+|||+.+|.|.=+..++..+ ..++++|+++..+...++++...+. ..++.+...|.... ...+.||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 5667899999999999998888744 3799999999999999988865432 24688888888763 3457899
Q ss_pred EEEecccccc---------------cChhH-------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHH
Q 024008 177 LIFDYTFFCA---------------IEPEM-------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEE 234 (274)
Q Consensus 177 ~v~~~~~~~~---------------~~~~~-------~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (274)
.|++-..... ..+.. -..++....+.|||||+|+.++.+.... -+.+.+..
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~-------ENE~vV~~ 298 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL-------QNEYVVQG 298 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT-------TTHHHHHH
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh-------hCHHHHHH
Confidence 9997433211 11111 1467888999999999999888766432 13455555
Q ss_pred HHhc
Q 024008 235 VLQP 238 (274)
Q Consensus 235 ~~~~ 238 (274)
+++.
T Consensus 299 ~L~~ 302 (359)
T 4fzv_A 299 AIEL 302 (359)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5554
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.36 E-value=3.6e-06 Score=72.32 Aligned_cols=125 Identities=14% Similarity=0.083 Sum_probs=81.7
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-CCCeeEEEecccc
Q 024008 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-TELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~ 184 (274)
..++.+|||+||++|.++..+++.|.+|++||+.+- -... ... ++|+++.+|.+...+ .++||+|+|-.+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l-~~~l----~~~---~~V~~~~~d~~~~~~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPM-AQSL----MDT---GQVTWLREDGFKFRPTRSNISWMVCDMVE 280 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCC-CHHH----HTT---TCEEEECSCTTTCCCCSSCEEEEEECCSS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhc-Chhh----ccC---CCeEEEeCccccccCCCCCcCEEEEcCCC
Confidence 456789999999999999999999999999998642 1111 111 579999999998554 4689999987664
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~ 243 (274)
. +......+.++......++.++............ ..-....+.+.|+.+||..
T Consensus 281 ~---p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~--l~~~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 281 K---PAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEE--VSHNLAYIQAQLDEHGINA 334 (375)
T ss_dssp C---HHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHH--HHHHHHHHHHHHHHTTCCE
T ss_pred C---hHHhHHHHHHHHhccccceEEEEEEecccchHHH--HHHHHHHHHHHHHhcCcch
Confidence 3 2333344455444444456666665443211000 0012456677888888863
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.23 E-value=6.2e-06 Score=75.11 Aligned_cols=121 Identities=18% Similarity=0.178 Sum_probs=82.9
Q ss_pred CccHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC----C-----------CCeEEEEeCChHHHHHHHHHhhcCCCC
Q 024008 93 QPAPIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS----P-----------ERYVVGLEISDIAIKKAEELSSSLPNA 156 (274)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~----~-----------~~~v~~iD~s~~~~~~a~~~~~~~~~~ 156 (274)
+|...+.-+.+.. ..++.+|+|..||+|.++..+.+ . ...++|+|+++.+...|+-+..-.+.
T Consensus 201 TP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~- 279 (530)
T 3ufb_A 201 TPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL- 279 (530)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC-
T ss_pred CcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC-
Confidence 4444444444433 34456999999999999876653 1 24699999999999999988765554
Q ss_pred cceEEEEcccCCC-----CCCCCeeEEEecccccccCh--------------hHHHHHHHHHHhccc-------CCcEEE
Q 024008 157 KFVSFLKADFFTW-----CPTELFDLIFDYTFFCAIEP--------------EMRAAWAQKIKDFLK-------PDGELI 210 (274)
Q Consensus 157 ~~v~~~~~d~~~~-----~~~~~fD~v~~~~~~~~~~~--------------~~~~~~l~~l~~~L~-------~gG~l~ 210 (274)
+..++..+|.... ....+||+|+++.+|..-.. ..-..++.++.+.|+ +||++.
T Consensus 280 ~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~a 359 (530)
T 3ufb_A 280 EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAA 359 (530)
T ss_dssp SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEE
T ss_pred ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEE
Confidence 2356777877642 12357999999999853211 111356788888886 699988
Q ss_pred EEEc
Q 024008 211 TLMF 214 (274)
Q Consensus 211 ~~~~ 214 (274)
++..
T Consensus 360 vVlP 363 (530)
T 3ufb_A 360 VVVP 363 (530)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7764
No 292
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.21 E-value=7.5e-07 Score=73.30 Aligned_cols=120 Identities=18% Similarity=0.107 Sum_probs=73.9
Q ss_pred CccHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc--ccC
Q 024008 93 QPAPIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA--DFF 167 (274)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~--d~~ 167 (274)
...-.+.++.+.. ..++.+|||+|||.|.++..+++ .+. .++|+|+.......+... ...+ .++..... |+.
T Consensus 74 RAAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~dv~ 150 (282)
T 3gcz_A 74 RGSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTDVF 150 (282)
T ss_dssp THHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCCGG
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcchh
Confidence 3344555555544 34557999999999999998875 444 789999976422111110 0011 22333332 333
Q ss_pred CCCCCCCeeEEEeccccc----ccChhHHHHHHHHHHhcccCC--cEEEEEEccC
Q 024008 168 TWCPTELFDLIFDYTFFC----AIEPEMRAAWAQKIKDFLKPD--GELITLMFPI 216 (274)
Q Consensus 168 ~~~~~~~fD~v~~~~~~~----~~~~~~~~~~l~~l~~~L~~g--G~l~~~~~~~ 216 (274)
..+.+++|+|++..+.. ..+....-.+++-+.++|+|| |.+++-.|.+
T Consensus 151 -~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 151 -NMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp -GSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred -hcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 33457899999987766 122111123577778999999 9999988753
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.14 E-value=4.3e-06 Score=70.59 Aligned_cols=61 Identities=23% Similarity=0.178 Sum_probs=52.4
Q ss_pred CccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC
Q 024008 93 QPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSL 153 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~ 153 (274)
.+...+..++.....++..|||++||+|..+..+++.|.+++|+|+++.+++.|++++...
T Consensus 220 ~p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 220 FPLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp SCHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3456667777665667789999999999999999999999999999999999999998653
No 294
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.10 E-value=2.4e-05 Score=65.66 Aligned_cols=126 Identities=19% Similarity=0.177 Sum_probs=79.4
Q ss_pred CCeEEEEcCCcchhHHHhh------CCCC--eEEEEeCCh------------HHHHHHHHHhhcC-CCCcceEEEEcccC
Q 024008 109 KGRALVPGCGTGYDVVAMA------SPER--YVVGLEISD------------IAIKKAEELSSSL-PNAKFVSFLKADFF 167 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~------~~~~--~v~~iD~s~------------~~~~~a~~~~~~~-~~~~~v~~~~~d~~ 167 (274)
.-+|||+|-|+|.+..... .+.. +++.+|..+ +.........+.. +..-.+++..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 3589999999999864322 1333 567777521 1122222222211 11124567888887
Q ss_pred CC---CCCCCeeEEEecccccccChhHH-HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024008 168 TW---CPTELFDLIFDYTFFCAIEPEMR-AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 168 ~~---~~~~~fD~v~~~~~~~~~~~~~~-~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~ 243 (274)
+. ....+||+|+.-+.-..-.++.. ..++.+++++++|||.+...+ ....++..|+++||.+
T Consensus 177 ~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt--------------aag~VRR~L~~aGF~V 242 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS--------------SSLSVRKSLLTLGFKV 242 (308)
T ss_dssp HHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC--------------CCHHHHHHHHHTTCEE
T ss_pred HHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe--------------CcHHHHHHHHHCCCEE
Confidence 62 23357999996432111122221 578999999999999988755 5678999999999999
Q ss_pred EEEee
Q 024008 244 ISIVD 248 (274)
Q Consensus 244 ~~~~~ 248 (274)
.++.-
T Consensus 243 ~k~~G 247 (308)
T 3vyw_A 243 GSSRE 247 (308)
T ss_dssp EEEEC
T ss_pred EecCC
Confidence 87764
No 295
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.99 E-value=2.2e-05 Score=65.05 Aligned_cols=118 Identities=23% Similarity=0.232 Sum_probs=70.4
Q ss_pred cHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCC-CC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-ccCCCC
Q 024008 95 APIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASP-ER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-DFFTWC 170 (274)
Q Consensus 95 ~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~ 170 (274)
.-.+.++.+.. ..++.+|||+||++|.++..+++. +. .|+|+|+.......... ....+. +-+.+..+ |+.. .
T Consensus 67 a~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~-l 143 (300)
T 3eld_A 67 AAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFT-M 143 (300)
T ss_dssp HHHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTT-S
T ss_pred HHHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeee-c
Confidence 34444444433 345679999999999999999973 44 78899986532100000 000010 12333322 3332 3
Q ss_pred CCCCeeEEEeccccc----ccChhHHHHHHHHHHhcccCC-cEEEEEEcc
Q 024008 171 PTELFDLIFDYTFFC----AIEPEMRAAWAQKIKDFLKPD-GELITLMFP 215 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~----~~~~~~~~~~l~~l~~~L~~g-G~l~~~~~~ 215 (274)
..+++|+|++..+.. .++......+++-+.++|+|| |.+++-.|.
T Consensus 144 ~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 144 PTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 357899999976655 111111124477778999999 999998876
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.96 E-value=7e-05 Score=61.85 Aligned_cols=119 Identities=18% Similarity=0.151 Sum_probs=76.1
Q ss_pred ccHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-ccCCC
Q 024008 94 PAPIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-DFFTW 169 (274)
Q Consensus 94 ~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~ 169 (274)
..-.+..+.+.. ..++++|||+||++|.++.+.+. .+. .|+|+|+...--+.-+ ..+..++ +-+.|..+ |+...
T Consensus 79 ~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w-~lV~~~~~~Dv~~l 156 (321)
T 3lkz_A 79 GTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGW-NIVTMKSGVDVFYR 156 (321)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTG-GGEEEECSCCTTSS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCC-cceEEEeccCHhhC
Confidence 344455555443 34557999999999999997776 555 7999999654111000 0011222 23788887 88765
Q ss_pred CCCCCeeEEEecccccccChh-----HHHHHHHHHHhcccCC-cEEEEEEccC
Q 024008 170 CPTELFDLIFDYTFFCAIEPE-----MRAAWAQKIKDFLKPD-GELITLMFPI 216 (274)
Q Consensus 170 ~~~~~fD~v~~~~~~~~~~~~-----~~~~~l~~l~~~L~~g-G~l~~~~~~~ 216 (274)
.+ .++|+|+|-.. ..-+.. ..-.+|+-+.++|++| |-+++-.+.+
T Consensus 157 ~~-~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 157 PS-ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CC-CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CC-CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 54 67999998655 322211 1124778888999999 8888876655
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.95 E-value=2.7e-05 Score=62.27 Aligned_cols=119 Identities=17% Similarity=0.183 Sum_probs=76.8
Q ss_pred cHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-ccCCCC
Q 024008 95 APIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-DFFTWC 170 (274)
Q Consensus 95 ~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~ 170 (274)
.-.+.++.+.. ..++++|||+||++|.++.+.+. .+. +|+|+|+-..-.+.-+ ..+..|+ +.++|..+ |++...
T Consensus 64 ~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~gw-n~v~fk~gvDv~~~~ 141 (267)
T 3p8z_A 64 SAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYGW-NIVKLMSGKDVFYLP 141 (267)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTTT-TSEEEECSCCGGGCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcCc-CceEEEeccceeecC
Confidence 33444444433 44567999999999999997776 454 7999999764221100 1122333 46999999 987644
Q ss_pred CCCCeeEEEecccccccCh----hHHHHHHHHHHhcccCCcEEEEEEccCC
Q 024008 171 PTELFDLIFDYTFFCAIEP----EMRAAWAQKIKDFLKPDGELITLMFPIS 217 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~~~~~----~~~~~~l~~l~~~L~~gG~l~~~~~~~~ 217 (274)
+ .++|+|+|-..-..-.+ ...-.+++-+.++|++ |-+++-.+.+.
T Consensus 142 ~-~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 142 P-EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp C-CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred C-ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 4 67999998755432221 1113477888899998 77777665553
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.93 E-value=0.00019 Score=58.22 Aligned_cols=111 Identities=18% Similarity=0.114 Sum_probs=66.7
Q ss_pred HHHHHhc-CCCCCCeEEEEcCCcchhHHHhhCC-CC-eEEEEeCChHHHHHHHHHhhcCCCCcc---eEEEEc-ccCCCC
Q 024008 98 IVHLHQS-GALPKGRALVPGCGTGYDVVAMASP-ER-YVVGLEISDIAIKKAEELSSSLPNAKF---VSFLKA-DFFTWC 170 (274)
Q Consensus 98 ~~~~~~~-~~~~~~~vLDiG~G~G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~---v~~~~~-d~~~~~ 170 (274)
+.++-+. +..++.+|||+||+.|.++.+.++. +. .|.|.++.... ...+....... +.|.++ |++...
T Consensus 62 L~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-----~~~P~~~~~~Gv~~i~~~~G~Df~~~~ 136 (269)
T 2px2_A 62 LRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-----HEEPMLMQSYGWNIVTMKSGVDVFYKP 136 (269)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-----SCCCCCCCSTTGGGEEEECSCCGGGSC
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-----ccCCCcccCCCceEEEeeccCCccCCC
Confidence 4444333 3456789999999999999999884 22 44454443321 00111100012 355557 998743
Q ss_pred CCCCeeEEEecccccccCh---hH--HHHHHHHHHhcccCCc-EEEEEEcc
Q 024008 171 PTELFDLIFDYTFFCAIEP---EM--RAAWAQKIKDFLKPDG-ELITLMFP 215 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~~~~~---~~--~~~~l~~l~~~L~~gG-~l~~~~~~ 215 (274)
..++|+|+|-..-. -.. +. .-.+++-+.++|+||| -+++=.|.
T Consensus 137 -~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 137 -SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp -CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred -CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 45799999976543 211 11 1125677779999999 88887765
No 299
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.89 E-value=0.00026 Score=60.55 Aligned_cols=141 Identities=12% Similarity=0.161 Sum_probs=100.4
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCC--------------------C
Q 024008 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLP--------------------N 155 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~--------------------~ 155 (274)
+.+++.. .+...|+.+|||.......+.. ++..++-+|. |++++.-++.+...+ .
T Consensus 89 v~~fl~~--~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~ 165 (334)
T 1rjd_A 89 ILEFLVA--NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLID 165 (334)
T ss_dssp HHHHHHH--CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEE
T ss_pred HHHHHHH--CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccC
Confidence 4444442 3347899999999999988876 4567777887 888887777765531 1
Q ss_pred CcceEEEEcccCCC---------C-CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCC----CC--
Q 024008 156 AKFVSFLKADFFTW---------C-PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS----DH-- 219 (274)
Q Consensus 156 ~~~v~~~~~d~~~~---------~-~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~----~~-- 219 (274)
+++..++.+|+.+. . ..+...++++-+++.+++++....+++.+.+.. |+|.+++.+.-.. +.
T Consensus 166 ~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg 244 (334)
T 1rjd_A 166 QGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFG 244 (334)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHH
T ss_pred CCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHH
Confidence 35789999999871 1 235678999999999999999999999999877 6777765553222 10
Q ss_pred --------C-CCCCc-----ccCHHHHHHHHhcCCCc
Q 024008 220 --------V-GGPPY-----KVSVSDYEEVLQPMGFQ 242 (274)
Q Consensus 220 --------~-~~~~~-----~~~~~~~~~~~~~~Gf~ 242 (274)
. .+.++ ..+.++..+.|.++||.
T Consensus 245 ~~m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 245 AIMQSNLKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred HHHHHHhhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 0 11111 23788899999999996
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.82 E-value=3.6e-05 Score=63.56 Aligned_cols=63 Identities=16% Similarity=0.241 Sum_probs=52.7
Q ss_pred CCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC
Q 024008 92 GQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLP 154 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~ 154 (274)
..+...+..++.....++..|||..||+|..+....+.|.+++|+|+++..++.+++++...+
T Consensus 196 ~~p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 196 PKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CCCHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 344566667776656778899999999999999999999999999999999999999987553
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.79 E-value=0.0013 Score=55.61 Aligned_cols=135 Identities=7% Similarity=-0.006 Sum_probs=99.8
Q ss_pred CeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCC--CCcceEEEEcccCCC---------CCCCCeeE
Q 024008 110 GRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLP--NAKFVSFLKADFFTW---------CPTELFDL 177 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~---------~~~~~fD~ 177 (274)
..|+++|||-=.....+.. .+.+++-+| .|.+++..++.+...+ -..+..++.+|+.+. ...+..-+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEE
Confidence 5799999998777666664 357899999 5999999998886432 136788999999751 11234567
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC---------------CCC-------CCccc--C-HHHH
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH---------------VGG-------PPYKV--S-VSDY 232 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~---------------~~~-------~~~~~--~-~~~~ 232 (274)
+++-++++|++++....+++.+...+.||+.+++........ ..+ .++.. + .+++
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 262 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRAVV 262 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTCCCH
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChHHH
Confidence 888899999999888999999999999999988876554311 112 12222 5 7899
Q ss_pred HHHHhcCCCcEEE
Q 024008 233 EEVLQPMGFQAIS 245 (274)
Q Consensus 233 ~~~~~~~Gf~~~~ 245 (274)
.+.|.++||+.+.
T Consensus 263 ~~~f~~~G~~~~~ 275 (310)
T 2uyo_A 263 ADWLNRHGWRATA 275 (310)
T ss_dssp HHHHTTTTEEEEE
T ss_pred HHHHHHCcCcccc
Confidence 9999999998873
No 302
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.65 E-value=7.4e-05 Score=61.80 Aligned_cols=124 Identities=15% Similarity=0.067 Sum_probs=88.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-----CCCCCCeeEEEecc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-----WCPTELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~~~~fD~v~~~~ 182 (274)
.+..+||+-+|||.+++.+.+.+.+++.+|.++..+...++++... .+++++..|... ..+..+||+|+.-.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~---~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFN---KKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTT---SCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcC---CcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 3567999999999999999997779999999999999999998653 579999999765 23445799999888
Q ss_pred cccccChhHHHHHHHHHHh--cccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEE
Q 024008 183 FFCAIEPEMRAAWAQKIKD--FLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~~--~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~ 244 (274)
.+..- +....+++.+.+ .+.++|++++-- +... .-..+.+.+.++..|.+..
T Consensus 168 PYe~k--~~~~~vl~~L~~~~~r~~~Gi~v~WY-Pi~~-------~~~~~~~~~~l~~~~~~~l 221 (283)
T 2oo3_A 168 SYERK--EEYKEIPYAIKNAYSKFSTGLYCVWY-PVVN-------KAWTEQFLRKMREISSKSV 221 (283)
T ss_dssp CCCST--THHHHHHHHHHHHHHHCTTSEEEEEE-EESS-------HHHHHHHHHHHHHHCSSEE
T ss_pred CCCCC--cHHHHHHHHHHHhCccCCCeEEEEEE-eccc-------hHHHHHHHHHHHhcCCCeE
Confidence 87732 244555665655 456788776632 2111 0134556666666666333
No 303
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.61 E-value=0.00012 Score=62.90 Aligned_cols=129 Identities=16% Similarity=0.047 Sum_probs=81.3
Q ss_pred CeEEEEcCCcchhHHHhhCCC--C-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC----CCeeEEEecc
Q 024008 110 GRALVPGCGTGYDVVAMASPE--R-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT----ELFDLIFDYT 182 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~--~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD~v~~~~ 182 (274)
.+|+|+.||.|.+...+...| + .+.++|+++.+++..+.|.+. ..++.+|+.+.... ..+|+++...
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 589999999999999998877 3 699999999999999999843 45778888774321 2689999987
Q ss_pred cccccCh--------hHHHHHHH---HHHhccc--CCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024008 183 FFCAIEP--------EMRAAWAQ---KIKDFLK--PDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 183 ~~~~~~~--------~~~~~~l~---~l~~~L~--~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
....++. +.+..++. ++.+.++ |. +++.+....-. ..-+...+.+.|++.||.+....-.
T Consensus 77 PCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~l~-----~~~~~~~i~~~l~~~GY~v~~~vl~ 149 (343)
T 1g55_A 77 PCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKGFE-----VSSTRDLLIQTIENCGFQYQEFLLS 149 (343)
T ss_dssp C------------------CHHHHHHHHGGGCSSCCS--EEEEEEETTGG-----GSHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred CCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCcccc-----CHHHHHHHHHHHHHCCCeeEEEEEE
Confidence 7555432 11222333 3444445 54 33333211100 0124678889999999987664333
Q ss_pred cc
Q 024008 250 KL 251 (274)
Q Consensus 250 ~~ 251 (274)
..
T Consensus 150 a~ 151 (343)
T 1g55_A 150 PT 151 (343)
T ss_dssp GG
T ss_pred HH
Confidence 33
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.57 E-value=0.00066 Score=59.01 Aligned_cols=123 Identities=12% Similarity=-0.058 Sum_probs=81.4
Q ss_pred CeEEEEcCCcchhHHHhhCCCCe-EEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---------CCCCeeEEE
Q 024008 110 GRALVPGCGTGYDVVAMASPERY-VVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---------PTELFDLIF 179 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~~-v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~fD~v~ 179 (274)
.+++|+-||.|.++..+.+.|++ +.++|+++.+++..+.|.+ +..++.+|+.+.. ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 57999999999999999888885 6699999999999998873 4667888887642 245799999
Q ss_pred ecccccccCh-------hHHHHHH---HHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024008 180 DYTFFCAIEP-------EMRAAWA---QKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 180 ~~~~~~~~~~-------~~~~~~l---~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~ 243 (274)
.......++. +.+..++ -++.+.++|. +++.+....-.. .......+.+. .|++.||.+
T Consensus 77 ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~--~~v~ENV~gl~s--~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 77 GGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL--FFLAENVPGIMQ--EKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp ECCCCCTTC-------CHHHHHHHHHHHHHHHHHCCS--EEEEEECTTTTC--GGGHHHHHHHH-HHHHTTEEE
T ss_pred ecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCC--EEEEecchHhhc--cCcHHHHHHHH-HHHcCCCcc
Confidence 8877655531 2222232 3344455663 444442221110 00111245666 888999988
No 305
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.48 E-value=0.00069 Score=57.37 Aligned_cols=71 Identities=18% Similarity=0.106 Sum_probs=56.3
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CC----CCCe
Q 024008 106 ALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CP----TELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~----~~~f 175 (274)
..+++.++|..||.|..+..+++ +..+|+|+|.++.+++.++ ++ . .++++++.+++.+. .. .+++
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~--~~Rv~lv~~nF~~l~~~L~~~g~~~~v 129 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D--DPRFSIIHGPFSALGEYVAERDLIGKI 129 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C--CTTEEEEESCGGGHHHHHHHTTCTTCE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c--CCcEEEEeCCHHHHHHHHHhcCCCCcc
Confidence 35678999999999999999987 3469999999999999995 44 1 36899999998772 11 1369
Q ss_pred eEEEec
Q 024008 176 DLIFDY 181 (274)
Q Consensus 176 D~v~~~ 181 (274)
|.|+..
T Consensus 130 DgILfD 135 (347)
T 3tka_A 130 DGILLD 135 (347)
T ss_dssp EEEEEE
T ss_pred cEEEEC
Confidence 999974
No 306
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.39 E-value=0.0018 Score=53.50 Aligned_cols=126 Identities=17% Similarity=0.118 Sum_probs=80.4
Q ss_pred HHHHHhcC--C-CCCCeEEEEcC------CcchhHH-HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC
Q 024008 98 IVHLHQSG--A-LPKGRALVPGC------GTGYDVV-AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF 167 (274)
Q Consensus 98 ~~~~~~~~--~-~~~~~vLDiG~------G~G~~~~-~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 167 (274)
+.+++... . ..+++|||+|+ -.|.... .+...|..++++|+.+-. . +.-.++++|+.
T Consensus 96 lcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~---------s----da~~~IqGD~~ 162 (344)
T 3r24_A 96 LCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFV---------S----DADSTLIGDCA 162 (344)
T ss_dssp HHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCB---------C----SSSEEEESCGG
T ss_pred HHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccc---------c----CCCeEEEcccc
Confidence 45555432 2 23479999996 5666432 222245799999997731 1 11255999987
Q ss_pred CCCCCCCeeEEEeccccc---ccCh------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhc
Q 024008 168 TWCPTELFDLIFDYTFFC---AIEP------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQP 238 (274)
Q Consensus 168 ~~~~~~~fD~v~~~~~~~---~~~~------~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (274)
......+||+|++-.+-. +.+. ...+.+++-+.+.|+|||-+++=.|... ..+++.++.+
T Consensus 163 ~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs----------g~~~L~~lrk- 231 (344)
T 3r24_A 163 TVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----------WNADLYKLMG- 231 (344)
T ss_dssp GEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS----------CCHHHHHHHT-
T ss_pred ccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC----------CHHHHHHHHh-
Confidence 755568899999864421 1111 2456777888999999999999776443 1245555554
Q ss_pred CCCcEEEEee
Q 024008 239 MGFQAISIVD 248 (274)
Q Consensus 239 ~Gf~~~~~~~ 248 (274)
-|..+.+..
T Consensus 232 -~F~~VK~fK 240 (344)
T 3r24_A 232 -HFSWWTAFV 240 (344)
T ss_dssp -TEEEEEEEE
T ss_pred -hCCeEEEEC
Confidence 588777764
No 307
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.37 E-value=5.6e-05 Score=80.12 Aligned_cols=135 Identities=14% Similarity=0.073 Sum_probs=67.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---C----CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCCCCeeE
Q 024008 107 LPKGRALVPGCGTGYDVVAMAS---P----ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~----~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~fD~ 177 (274)
.+..+|||||.|+|..+..+.+ . -..++..|+++...+.+++++... +++....|...+ .....||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeE
Confidence 3457999999999987554332 1 127899999988887777765432 133322243321 12457999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCC----CC---CC----CCcccCHHHHHHHHhcCCCcEEEE
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISD----HV---GG----PPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~----~~---~~----~~~~~~~~~~~~~~~~~Gf~~~~~ 246 (274)
|++.++++.. ......+.+++++|+|||++++.+..... .. .. .....+.++|.+++..+||..+..
T Consensus 1315 via~~vl~~t--~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf~~~~~ 1392 (2512)
T 2vz8_A 1315 LVCNCALATL--GDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGASLHLVAL 1392 (2512)
T ss_dssp EEEECC----------------------CCEEEEEEC--------------------------CTTTTSSTTTTEEEEEE
T ss_pred EEEccccccc--ccHHHHHHHHHHhcCCCcEEEEEeccccccccccccccccccccCCcccCHHHHHHHHHhCCCceeee
Confidence 9999998754 34456789999999999998886532100 00 00 001246778888899999988765
Q ss_pred e
Q 024008 247 V 247 (274)
Q Consensus 247 ~ 247 (274)
.
T Consensus 1393 ~ 1393 (2512)
T 2vz8_A 1393 K 1393 (2512)
T ss_dssp E
T ss_pred c
Confidence 3
No 308
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.27 E-value=0.002 Score=54.84 Aligned_cols=132 Identities=14% Similarity=-0.012 Sum_probs=84.7
Q ss_pred CCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--CCCeeEEEeccccc
Q 024008 109 KGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--TELFDLIFDYTFFC 185 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~~~ 185 (274)
+.+++|+.||.|.+...+...|+ .+.++|+++.+++..+.+.+... .+|+.+... -..+|+|+......
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~--------~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP--------EGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC--------BSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC--------cCCHHHcCHhhCCCCCEEEECCCCC
Confidence 46899999999999999999888 57789999999999999985431 577766322 13589999987765
Q ss_pred ccCh--------h----HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeeccccc
Q 024008 186 AIEP--------E----MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAI 253 (274)
Q Consensus 186 ~~~~--------~----~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~~ 253 (274)
.++. + ....+ -++.+.++|. +++.+....-... ......+.+.+.|++.||.+....-....+
T Consensus 83 ~fS~ag~~~g~~d~r~~L~~~~-~r~i~~~~P~--~~~~ENV~gl~~~--~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~ 157 (327)
T 2c7p_A 83 AFSISGKQKGFEDSRGTLFFDI-ARIVREKKPK--VVFMENVKNFASH--DNGNTLEVVKNTMNELDYSFHAKVLNALDY 157 (327)
T ss_dssp TTCTTSCCCGGGSTTSCHHHHH-HHHHHHHCCS--EEEEEEEGGGGTG--GGGHHHHHHHHHHHHTTBCCEEEEEEGGGG
T ss_pred CcchhcccCCCcchhhHHHHHH-HHHHHhccCc--EEEEeCcHHHHhc--cccHHHHHHHHHHHhCCCEEEEEEEEHHHc
Confidence 5431 1 12233 3344556774 3343322211100 011235678888999999876544433333
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.25 E-value=0.00048 Score=59.19 Aligned_cols=57 Identities=19% Similarity=0.104 Sum_probs=49.6
Q ss_pred CCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC
Q 024008 109 KGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW 169 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 169 (274)
+..|||||.|.|.++..|++. +.+++++|+++..+...++.. .. ++++++.+|+.+.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~---~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG---SPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT---SSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC---CCEEEEECCccch
Confidence 478999999999999999974 569999999999999998877 22 5799999999763
No 310
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.15 E-value=0.0013 Score=55.96 Aligned_cols=133 Identities=11% Similarity=-0.037 Sum_probs=87.2
Q ss_pred CCeEEEEcCCcchhHHHhhCCCC---eE-EEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEe
Q 024008 109 KGRALVPGCGTGYDVVAMASPER---YV-VGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFD 180 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~~~---~v-~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~~ 180 (274)
..+++|+.||.|.....+.+.|. .+ .++|+++.+++..+.|.+.. ++.+|+.+..+ ...+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhccCCCCEEEe
Confidence 45899999999999999988873 45 69999999999999987432 45678776432 236899998
Q ss_pred ccccccc--C--------hhHHHHHHHHHHh-cccC---CcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024008 181 YTFFCAI--E--------PEMRAAWAQKIKD-FLKP---DGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 181 ~~~~~~~--~--------~~~~~~~l~~l~~-~L~~---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 246 (274)
......+ + .+.+..++.++.+ +++. .-.+++.+....-.. .-+.+.+.+.|++.||.+...
T Consensus 83 gpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~-----~~~~~~i~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 83 SPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKE-----SLVFKEIYNILIKNQYYIKDI 157 (327)
T ss_dssp CCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGG-----SHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcC-----hHHHHHHHHHHHhCCCEEEEE
Confidence 8775555 1 1222334455555 4432 234555553322110 114678889999999987665
Q ss_pred eeccccc
Q 024008 247 VDNKLAI 253 (274)
Q Consensus 247 ~~~~~~~ 253 (274)
.-....+
T Consensus 158 vl~a~~y 164 (327)
T 3qv2_A 158 ICSPIDI 164 (327)
T ss_dssp EECGGGG
T ss_pred EEeHHHc
Confidence 5444444
No 311
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.12 E-value=0.005 Score=50.36 Aligned_cols=138 Identities=15% Similarity=0.082 Sum_probs=88.6
Q ss_pred HHhcCCCCCCeEEEEcCCcchhHHHhhC---------CCCeEEEEe-----CCh----------------------HHHH
Q 024008 101 LHQSGALPKGRALVPGCGTGYDVVAMAS---------PERYVVGLE-----ISD----------------------IAIK 144 (274)
Q Consensus 101 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~---------~~~~v~~iD-----~s~----------------------~~~~ 144 (274)
+.+....-++.|+|+||-.|..+..++. ...+++++| ..+ +.+.
T Consensus 62 l~~~i~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~ 141 (257)
T 3tos_A 62 LYRQVLDVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLK 141 (257)
T ss_dssp HHHHTTTSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHH
T ss_pred HHHHhhCCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHH
Confidence 3333334467999999999998887653 246899999 321 1122
Q ss_pred HH---HHHhhcCCC-CcceEEEEcccCCC-------CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 145 KA---EELSSSLPN-AKFVSFLKADFFTW-------CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 145 ~a---~~~~~~~~~-~~~v~~~~~d~~~~-------~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.. .++....+. .++++++.+++.+. .+..+||+|+.-.-. ......+++.+...|+|||+|++-+
T Consensus 142 ~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 142 EVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----YEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp HHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----cchHHHHHHHHHHHhCCCcEEEEcC
Confidence 11 112223333 37899999999872 234579999965421 1334567899999999999999877
Q ss_pred ccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024008 214 FPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
+.... +.--..-+.+.+...|.++.....
T Consensus 218 ~~~~~------w~G~~~A~~ef~~~~~~~i~~~p~ 246 (257)
T 3tos_A 218 LDNPK------WPGENIAMRKVLGLDHAPLRLLPG 246 (257)
T ss_dssp TTCTT------CTHHHHHHHHHTCTTSSCCEECTT
T ss_pred CCCCC------ChHHHHHHHHHHhhCCCeEEEccC
Confidence 53211 112356677888888877655433
No 312
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.01 E-value=0.027 Score=47.93 Aligned_cols=140 Identities=15% Similarity=0.146 Sum_probs=93.9
Q ss_pred CCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCC----------------------CCcceEEEE
Q 024008 109 KGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLP----------------------NAKFVSFLK 163 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~---~~~v~~iD~s~~~~~~a~~~~~~~~----------------------~~~~v~~~~ 163 (274)
...|+-+|||-=.....+... +.+++=||. |+.++.=++.+...+ -+.+..++.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 468999999987766666553 557777887 555554433333210 135788999
Q ss_pred cccCCC-----------CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc-cCCCC----------CC
Q 024008 164 ADFFTW-----------CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF-PISDH----------VG 221 (274)
Q Consensus 164 ~d~~~~-----------~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~-~~~~~----------~~ 221 (274)
+|+.+. ...+..-++++-+++.|++++....+++.+.+...+ |.+++.+. .+.+. ..
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~-~~~i~yE~i~p~d~fg~~M~~~l~~~ 248 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER-AMFINYEQVNMGDRFGQIMIENLRRR 248 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS-EEEEEEEECCTTSHHHHHHHHHHHTT
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC-ceEEEEeccCCCCHHHHHHHHHHHHh
Confidence 999761 233456688888999999999999999999987754 55444443 22211 11
Q ss_pred CCC-----cccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 222 GPP-----YKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 222 ~~~-----~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
|.+ ...+.+...+.|.++||..+...+..
T Consensus 249 g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~~ 282 (334)
T 3iei_A 249 QCDLAGVETCKSLESQKERLLSNGWETASAVDMM 282 (334)
T ss_dssp TCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEHH
T ss_pred CCCCcccccCCCHHHHHHHHHHcCCCcceeecHH
Confidence 221 12478888999999999987766543
No 313
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.00 E-value=0.0014 Score=55.77 Aligned_cols=64 Identities=9% Similarity=-0.045 Sum_probs=55.3
Q ss_pred CCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC
Q 024008 91 IGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLP 154 (274)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~ 154 (274)
...+...+..++.....++..|||.-||+|..+.+..+.|.+++|+|+++..++.+++++...+
T Consensus 235 ~~kp~~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 235 ARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp SCCCTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CcCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 3455677777777666778999999999999999999999999999999999999999987664
No 314
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.89 E-value=0.00077 Score=63.37 Aligned_cols=125 Identities=20% Similarity=0.232 Sum_probs=80.1
Q ss_pred CCeEEEEcCCcchhHHHhhC------------CC--CeEEEEeC---ChHHHHHHHH-----------HhhcCC------
Q 024008 109 KGRALVPGCGTGYDVVAMAS------------PE--RYVVGLEI---SDIAIKKAEE-----------LSSSLP------ 154 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~------------~~--~~v~~iD~---s~~~~~~a~~-----------~~~~~~------ 154 (274)
.-+|+|+|.|+|.+.+...+ .. .+++.+|. +.+.+..+-. ....+.
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 35999999999998765533 11 47999998 4444443221 111111
Q ss_pred ----C---CcceEEEEcccCCCCC------CCCeeEEEecccccccChhH-HHHHHHHHHhcccCCcEEEEEEccCCCCC
Q 024008 155 ----N---AKFVSFLKADFFTWCP------TELFDLIFDYTFFCAIEPEM-RAAWAQKIKDFLKPDGELITLMFPISDHV 220 (274)
Q Consensus 155 ----~---~~~v~~~~~d~~~~~~------~~~fD~v~~~~~~~~~~~~~-~~~~l~~l~~~L~~gG~l~~~~~~~~~~~ 220 (274)
+ .-.+++..+|+.+..+ ...+|.++.-..-..-.+++ ...++..+.++++|||.+....
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------- 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------- 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC-------
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc-------
Confidence 0 1256778888876221 36899999643211111111 1467899999999999876543
Q ss_pred CCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 221 GGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
....+.+.+.++||.+..+.
T Consensus 212 -------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 -------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp -------CCHHHHHHHHHTTCEEEEEE
T ss_pred -------CcHHHHHHHHhCCeEEEecc
Confidence 34688999999999988766
No 315
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.81 E-value=0.0095 Score=50.57 Aligned_cols=133 Identities=14% Similarity=0.014 Sum_probs=85.4
Q ss_pred CeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--CCCeeEEEecccccc
Q 024008 110 GRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--TELFDLIFDYTFFCA 186 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~~~~ 186 (274)
++|+|+-||.|.+...+.+.|+ .+.++|+++.+++.-+.|.+ -.++.+|+.+... -..+|+++.....+.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~ 73 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDEFPKCDGIIGGPPSQS 73 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGGSCCCSEEECCCCGGG
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhhCCcccEEEecCCCCC
Confidence 4799999999999999988898 46689999999998888863 3567889887432 246899998766554
Q ss_pred cCh--------hHHHHH---HHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeeccccc
Q 024008 187 IEP--------EMRAAW---AQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAI 253 (274)
Q Consensus 187 ~~~--------~~~~~~---l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~~~ 253 (274)
++. +.+..+ +-++.+.++|. +++.+....-.. ....-....+.+.|++.||.+....-....+
T Consensus 74 fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~~--~~~~~~~~~i~~~l~~~GY~v~~~vlna~~y 147 (331)
T 3ubt_Y 74 WSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMMA--QRHNKAVQEFIQEFDNAGYDVHIILLNANDY 147 (331)
T ss_dssp TEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGGG--CTTSHHHHHHHHHHHHHTEEEEEEEEEGGGT
T ss_pred cCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeeccccc--ccccchhhhhhhhhccCCcEEEEEecccccC
Confidence 311 111122 23455556774 444442221110 0111246778888999999876554444333
No 316
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.76 E-value=0.0039 Score=58.42 Aligned_cols=124 Identities=19% Similarity=0.193 Sum_probs=80.2
Q ss_pred CeEEEEcCCcchhHHHhhC------------CC--CeEEEEeC---ChHHHHHHHHH-----------hhcCCC------
Q 024008 110 GRALVPGCGTGYDVVAMAS------------PE--RYVVGLEI---SDIAIKKAEEL-----------SSSLPN------ 155 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~------------~~--~~v~~iD~---s~~~~~~a~~~-----------~~~~~~------ 155 (274)
-+|||+|.|+|.+.....+ .. .+++++|. +++.+..+-.. ...+..
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 5899999999998754432 11 37999998 77766643321 111110
Q ss_pred -------CcceEEEEcccCCCCC------CCCeeEEEecccccccChhH-HHHHHHHHHhcccCCcEEEEEEccCCCCCC
Q 024008 156 -------AKFVSFLKADFFTWCP------TELFDLIFDYTFFCAIEPEM-RAAWAQKIKDFLKPDGELITLMFPISDHVG 221 (274)
Q Consensus 156 -------~~~v~~~~~d~~~~~~------~~~fD~v~~~~~~~~~~~~~-~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~ 221 (274)
...+++..+|+.+..+ ...||+++.-..-....+++ ...++..+.++++|||.+....
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~-------- 219 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT-------- 219 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC--------
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc--------
Confidence 0234566677765221 36799999644222222222 1467899999999999877543
Q ss_pred CCCcccCHHHHHHHHhcCCCcEEEEe
Q 024008 222 GPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~Gf~~~~~~ 247 (274)
....+.+.+.++||.+....
T Consensus 220 ------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 ------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp ------CCHHHHHHHHHHTCEEEEEE
T ss_pred ------CcHHHHHHHHhCCeEEEecc
Confidence 34688899999999987765
No 317
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.72 E-value=0.0021 Score=54.49 Aligned_cols=63 Identities=16% Similarity=0.108 Sum_probs=51.9
Q ss_pred CCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCCh---HHHHHHHHHhhcCC
Q 024008 92 GQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISD---IAIKKAEELSSSLP 154 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~---~~~~~a~~~~~~~~ 154 (274)
..+...+..++.....++..|||.-||+|..+.+..+.|.+++|+|+++ ..++.+++++...+
T Consensus 226 ~kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 226 QKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4456667777776667789999999999999999999999999999999 99999999986543
No 318
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.72 E-value=0.0014 Score=55.91 Aligned_cols=131 Identities=14% Similarity=0.027 Sum_probs=85.0
Q ss_pred CeEEEEcCCcchhHHHhhCCCC---eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEecc
Q 024008 110 GRALVPGCGTGYDVVAMASPER---YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFDYT 182 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~---~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~fD~v~~~~ 182 (274)
.+++|+-||.|.....+.+.|. .+.++|+++.+++..+.|.+. ..+..+|+.+..+ ...+|+++...
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhccCCCCEEEecC
Confidence 4799999999999999988774 578999999999999888743 3466788876332 23689999876
Q ss_pred cccccCh--------hHHHHHHH---HHHhccc-CCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 183 FFCAIEP--------EMRAAWAQ---KIKDFLK-PDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 183 ~~~~~~~--------~~~~~~l~---~l~~~L~-~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
....++. +.+..++. ++.+.++ | .+++.+....-.. ....+.+.+.|++.||.+....-..
T Consensus 78 PCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl~~-----~~~~~~i~~~l~~~GY~v~~~vl~a 150 (333)
T 4h0n_A 78 PCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGFEN-----STVRNLFIDKLKECNFIYQEFLLCP 150 (333)
T ss_dssp CCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTGGG-----SHHHHHHHHHHHHTTEEEEEEEECT
T ss_pred CCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhhhh-----hhHHHHHHHHHHhCCCeEEEEEecH
Confidence 6554421 11112223 3334444 4 4555553332110 1135788999999999886655444
Q ss_pred ccc
Q 024008 251 LAI 253 (274)
Q Consensus 251 ~~~ 253 (274)
..+
T Consensus 151 ~~~ 153 (333)
T 4h0n_A 151 STV 153 (333)
T ss_dssp TTT
T ss_pred HHc
Confidence 444
No 319
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.54 E-value=0.033 Score=40.81 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=69.8
Q ss_pred CeEEEEcCCc-chhH-HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEEecc
Q 024008 110 GRALVPGCGT-GYDV-VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIFDYT 182 (274)
Q Consensus 110 ~~vLDiG~G~-G~~~-~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~~~~ 182 (274)
.+|+=+|||. |... ..|.+.|..|+++|.+++.++.+++. .+.++.+|..+. ..-..+|+|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~--------g~~~i~gd~~~~~~l~~a~i~~ad~vi~~- 78 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER--------GVRAVLGNAANEEIMQLAHLECAKWLILT- 78 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEESCTTSHHHHHHTTGGGCSEEEEC-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc--------CCCEEECCCCCHHHHHhcCcccCCEEEEE-
Confidence 5899999865 3222 23334789999999999988877642 267788988762 122468888843
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
.+.+.....+-...+.+.|+..++... ...+..+.+++.|-..+-
T Consensus 79 ----~~~~~~n~~~~~~a~~~~~~~~iiar~--------------~~~~~~~~l~~~G~d~vi 123 (140)
T 3fwz_A 79 ----IPNGYEAGEIVASARAKNPDIEIIARA--------------HYDDEVAYITERGANQVV 123 (140)
T ss_dssp ----CSCHHHHHHHHHHHHHHCSSSEEEEEE--------------SSHHHHHHHHHTTCSEEE
T ss_pred ----CCChHHHHHHHHHHHHHCCCCeEEEEE--------------CCHHHHHHHHHCCCCEEE
Confidence 222222233344566677888777655 234555777888876544
No 320
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.24 E-value=0.012 Score=49.16 Aligned_cols=93 Identities=12% Similarity=0.122 Sum_probs=59.3
Q ss_pred cceEEEEcccCC---CCCCCCeeEEEecccccccCh------------------hHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 157 KFVSFLKADFFT---WCPTELFDLIFDYTFFCAIEP------------------EMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 157 ~~v~~~~~d~~~---~~~~~~fD~v~~~~~~~~~~~------------------~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
.+++++++|..+ ..++++||+|+++..+..... ..+..++.++.++|+|||.+++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 457899999987 345689999999988753210 11345778999999999999887532
Q ss_pred CCCCC--CCCCcccC-HHHHHHHHhcCCCcEEEEeec
Q 024008 216 ISDHV--GGPPYKVS-VSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 216 ~~~~~--~~~~~~~~-~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
..... .+....++ ...+..+++++||......-+
T Consensus 100 ~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~iiW 136 (297)
T 2zig_A 100 VAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPIIW 136 (297)
T ss_dssp EEEECC----EEEECHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CccccccCCcccccccHHHHHHHHHHcCCeeeccEEE
Confidence 11000 00000011 356888899999987765443
No 321
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.17 E-value=0.026 Score=50.47 Aligned_cols=128 Identities=12% Similarity=-0.013 Sum_probs=80.0
Q ss_pred CeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------------
Q 024008 110 GRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----------------- 171 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------------- 171 (274)
.+++|+-||.|.....+.+.|+ .+.++|+++.+++..+.+.... +...++.+|+.+...
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~---p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD---PATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC---TTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC---CCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 5899999999999999999888 4889999999998888887432 224566778765221
Q ss_pred -CCCeeEEEecccccccChhH-----------------HHHHH---HHHHhcccCCcEEEEEEccCCCCCCCCCcccCHH
Q 024008 172 -TELFDLIFDYTFFCAIEPEM-----------------RAAWA---QKIKDFLKPDGELITLMFPISDHVGGPPYKVSVS 230 (274)
Q Consensus 172 -~~~fD~v~~~~~~~~~~~~~-----------------~~~~l---~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 230 (274)
...+|+++.......++..- +..++ -++.+.++|. +++.+....-.. ........
T Consensus 166 ~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk--~fvlENV~gl~s--~~~g~~f~ 241 (482)
T 3me5_A 166 HIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPA--MFVLENVKNLKS--HDKGKTFR 241 (482)
T ss_dssp HSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCS--EEEEEEETTTTT--GGGGHHHH
T ss_pred cCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCc--EEEEeCcHHHhc--ccCCcHHH
Confidence 13689999877665543210 00122 2334445663 444443222111 01112356
Q ss_pred HHHHHHhcCCCcEE
Q 024008 231 DYEEVLQPMGFQAI 244 (274)
Q Consensus 231 ~~~~~~~~~Gf~~~ 244 (274)
.+.+.|++.||.+.
T Consensus 242 ~i~~~L~~lGY~v~ 255 (482)
T 3me5_A 242 IIMQTLDELGYDVA 255 (482)
T ss_dssp HHHHHHHHTTEEET
T ss_pred HHHHHHhcCCcEEE
Confidence 78889999999863
No 322
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.92 E-value=0.018 Score=48.17 Aligned_cols=73 Identities=12% Similarity=-0.020 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCe---EEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----CCCeeEEE
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERY---VVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----TELFDLIF 179 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~---v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD~v~ 179 (274)
.+.+++|+-||.|.....+.+.|.+ +.++|+++.+++..+.+.+ ...+..+|+.+... ...+|+++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~~~~~Dll~ 88 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQEWGPFDLVI 88 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHHTCCCSEEE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcccCCcCEEE
Confidence 3469999999999999999888885 4899999999988887763 34577888877432 13699999
Q ss_pred ecccccc
Q 024008 180 DYTFFCA 186 (274)
Q Consensus 180 ~~~~~~~ 186 (274)
.......
T Consensus 89 ggpPCQ~ 95 (295)
T 2qrv_A 89 GGSPCND 95 (295)
T ss_dssp ECCCCGG
T ss_pred ecCCCcc
Confidence 8765444
No 323
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.91 E-value=0.16 Score=36.98 Aligned_cols=106 Identities=15% Similarity=0.023 Sum_probs=64.7
Q ss_pred CCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024008 109 KGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~ 179 (274)
..+|+=+|||. .+..++ +.|.+|+++|.+++.++.+++. .+.++.+|..+. .....+|+|+
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 35799999854 544443 4789999999999988777642 256788888762 1235689888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~ 244 (274)
.... ++.....+....+.+. ...++... +..+..+.++..|-..+
T Consensus 76 ~~~~-----~~~~n~~~~~~a~~~~-~~~iia~~--------------~~~~~~~~l~~~G~~~v 120 (141)
T 3llv_A 76 ITGS-----DDEFNLKILKALRSVS-DVYAIVRV--------------SSPKKKEEFEEAGANLV 120 (141)
T ss_dssp ECCS-----CHHHHHHHHHHHHHHC-CCCEEEEE--------------SCGGGHHHHHHTTCSEE
T ss_pred EecC-----CHHHHHHHHHHHHHhC-CceEEEEE--------------cChhHHHHHHHcCCCEE
Confidence 5432 1222333344444455 55555544 22234456677786543
No 324
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.80 E-value=0.015 Score=50.97 Aligned_cols=60 Identities=10% Similarity=0.045 Sum_probs=46.7
Q ss_pred CCCCeEEEEcCCcchhHHHhh-C-C--CCeEEEEeCChHHHHHHHHHhhc--CCCC-cceEEEEccc
Q 024008 107 LPKGRALVPGCGTGYDVVAMA-S-P--ERYVVGLEISDIAIKKAEELSSS--LPNA-KFVSFLKADF 166 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~-~-~--~~~v~~iD~s~~~~~~a~~~~~~--~~~~-~~v~~~~~d~ 166 (274)
.++..++|+|++.|..+..++ + . ..+|+++|++|...+..+++... ++.. ++++++..-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 456899999999999999877 3 2 26999999999999999999876 3222 5666665443
No 325
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.66 E-value=0.05 Score=46.42 Aligned_cols=91 Identities=19% Similarity=0.104 Sum_probs=62.2
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 183 (274)
..++.+||-+|+|. |..+..+++ .|++|+++|.+++..+.+++.- . + . ++ .|.... ...+|+|+..-.
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lG----a-~-~-v~-~~~~~~--~~~~D~vid~~g 243 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMG----V-K-H-FY-TDPKQC--KEELDFIISTIP 243 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTT----C-S-E-EE-SSGGGC--CSCEEEEEECCC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcC----C-C-e-ec-CCHHHH--hcCCCEEEECCC
Confidence 44668999999875 677777777 7889999999999888887632 1 1 1 12 332212 127999985422
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
-. ..+....++|+++|.++....
T Consensus 244 ~~--------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 244 TH--------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SC--------CCHHHHHTTEEEEEEEEECCC
T ss_pred cH--------HHHHHHHHHHhcCCEEEEECC
Confidence 11 135678899999999988654
No 326
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.65 E-value=0.018 Score=48.90 Aligned_cols=91 Identities=18% Similarity=0.170 Sum_probs=60.6
Q ss_pred cceEEEEcccCC---CCCCCCeeEEEecccccccC------------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC
Q 024008 157 KFVSFLKADFFT---WCPTELFDLIFDYTFFCAIE------------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVG 221 (274)
Q Consensus 157 ~~v~~~~~d~~~---~~~~~~fD~v~~~~~~~~~~------------~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~ 221 (274)
....++.+|..+ ..++++||+|++...+.... ......++..+.++|+|||.+++..-.... .
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~--~ 90 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYM--K 90 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEE--T
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEec--C
Confidence 457889999875 35678999999998875321 024567889999999999999887632200 0
Q ss_pred CCCcc--cCHHHHHHHHhcCCCcEEEEeec
Q 024008 222 GPPYK--VSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 222 ~~~~~--~~~~~~~~~~~~~Gf~~~~~~~~ 249 (274)
+.++. +....+.++++..||......-+
T Consensus 91 g~~~~~~~~~~~i~~~~~~~Gf~~~~~iiW 120 (323)
T 1boo_A 91 GVPARSIYNFRVLIRMIDEVGFFLAEDFYW 120 (323)
T ss_dssp TEEEECCHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCcccccchHHHHHHHHHhCCCEEEEEEEE
Confidence 11111 12445667788999987764443
No 327
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.55 E-value=0.0062 Score=52.64 Aligned_cols=93 Identities=14% Similarity=0.151 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC---CCCCCCeeE
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT---WCPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~---~~~~~~fD~ 177 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-. + .++.. |+.+ ....+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-----~--~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-----T--HVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-----S--EEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-----C--EEecCCccCHHHHHHHhcCCCCcE
Confidence 4568999999876 777777777 677 79999999999999876531 1 11211 1111 011237999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
|+....- ...+....++|+++|++++...
T Consensus 262 vid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 262 ALESTGS--------PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEECSCC--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEECCCC--------HHHHHHHHHHHhcCCEEEEeCC
Confidence 9853221 2346788999999999887654
No 328
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.38 E-value=0.0087 Score=51.31 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEE---cccCC----CCCCCCe
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLK---ADFFT----WCPTELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~----~~~~~~f 175 (274)
..++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-.. .++. .|+.+ ......+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-------~vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT-------DIINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC-------EEECGGGSCHHHHHHHHTTTCCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc-------eEEcCCCcCHHHHHHHHcCCCCC
Confidence 34568999999875 666777776 788 899999999989888775311 1121 11111 1223479
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
|+|+....- ...+....++|++||+++....
T Consensus 237 D~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 237 DKVVIAGGD--------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp EEEEECSSC--------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCC--------hHHHHHHHHHHhcCCEEEEecc
Confidence 999953221 1246788899999999987654
No 329
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.30 E-value=0.057 Score=46.22 Aligned_cols=93 Identities=19% Similarity=0.136 Sum_probs=62.1
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc------ccCC----CCCC
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA------DFFT----WCPT 172 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~------d~~~----~~~~ 172 (274)
..++.+||-+|+|. |..+..+++ .|+ +|+++|.+++..+.+++.- . + .++.. +..+ ...
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG----a-~--~vi~~~~~~~~~~~~~i~~~~~- 240 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIG----A-D--LVLQISKESPQEIARKVEGQLG- 240 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT----C-S--EEEECSSCCHHHHHHHHHHHHT-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC----C-C--EEEcCcccccchHHHHHHHHhC-
Confidence 34568999999875 777777777 788 8999999999888887542 1 1 11211 1111 112
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
..+|+|+..-.- ...+....++|+++|+++....
T Consensus 241 ~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 241 CKPEVTIECTGA--------EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCCCEEEECCCC--------hHHHHHHHHHhcCCCEEEEEec
Confidence 569999853221 1345778899999999887653
No 330
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.29 E-value=0.071 Score=45.70 Aligned_cols=96 Identities=15% Similarity=0.036 Sum_probs=64.4
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCe-EEEEeCChHHHHHHHHHhhcCCCCcceEEEE-----cccCC----CCCCC
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PERY-VVGLEISDIAIKKAEELSSSLPNAKFVSFLK-----ADFFT----WCPTE 173 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~-v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~-----~d~~~----~~~~~ 173 (274)
..++.+||-+|+|. |..+..+++ .|++ |+++|.+++..+.+++. ... -+.+.. .|+.+ .....
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~----~~~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE----VVTHKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT----CEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh----cccccccccchHHHHHHHHHHhCCC
Confidence 34567899999865 667777777 7886 99999999999999877 221 122221 12111 12245
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.+|+|+..-. . ...+....++|++||++++...
T Consensus 252 g~Dvvid~~g-----~---~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 252 EPAVALECTG-----V---ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CCSEEEECSC-----C---HHHHHHHHHHSCTTCEEEECCC
T ss_pred CCCEEEECCC-----C---hHHHHHHHHHhcCCCEEEEEcc
Confidence 7999985322 1 1346788899999999988654
No 331
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.27 E-value=0.014 Score=45.41 Aligned_cols=90 Identities=20% Similarity=0.136 Sum_probs=58.4
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||..|+ |.|..+..+++ .|++|+++|.+++..+.+++. +. .. .+ |..+ ......
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~--~~-~~--d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL----GV--EY-VG--DSRSVDFADEILELTDGYG 107 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT----CC--SE-EE--ETTCSTHHHHHHHHTTTCC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC--CE-Ee--eCCcHHHHHHHHHHhCCCC
Confidence 45679999994 55666665555 788999999998877766532 21 11 11 2221 112246
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+++.+.. . ..+....++|+++|+++....
T Consensus 108 ~D~vi~~~g----~-----~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 108 VDVVLNSLA----G-----EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEEEECCC----T-----HHHHHHHHTEEEEEEEEECSC
T ss_pred CeEEEECCc----h-----HHHHHHHHHhccCCEEEEEcC
Confidence 999996432 1 246788899999999887643
No 332
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.19 E-value=0.51 Score=38.47 Aligned_cols=128 Identities=11% Similarity=-0.090 Sum_probs=76.0
Q ss_pred CeEEEEcCCcchhHHHhhC----CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024008 110 GRALVPGCGTGYDVVAMAS----PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~----~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 185 (274)
++||=.|+ |..+..+++ .|.+|++++-++........ .+++++.+|+.+.. -..+|+|+......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~-~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS-LDGVTHLLISTAPD 74 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC-CTTCCEEEECCCCB
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc-cCCCCEEEECCCcc
Confidence 58999994 877765554 78999999998865443322 24889999998755 56799999766544
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEE-EEEccCCCCCCC------------CCcccCHHHHHHHHhcC-CCcEEEEee
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELI-TLMFPISDHVGG------------PPYKVSVSDYEEVLQPM-GFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-Gf~~~~~~~ 248 (274)
.........+++.+.+.-..-..++ +..........+ .+|..++...++++... |+..+-+..
T Consensus 75 ~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp 151 (286)
T 3ius_A 75 SGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL 151 (286)
T ss_dssp TTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred ccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence 3322333445454444312223444 443222111110 12334566667777776 877766665
No 333
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.17 E-value=0.42 Score=35.21 Aligned_cols=92 Identities=11% Similarity=0.047 Sum_probs=58.3
Q ss_pred CeEEEEcCCcchhHHHhhC----CCCeEEEEeCC-hHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024008 110 GRALVPGCGTGYDVVAMAS----PERYVVGLEIS-DIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~----~~~~v~~iD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~ 179 (274)
.+|+=+|+ |..+..+++ .|..|+++|.+ ++.++....... ..+.++.+|..+. ..-...|+|+
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 56787876 566655544 78999999997 455555444332 2378899998762 1235688888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+.. +++.....+....+.+.|...++...
T Consensus 77 ~~~-----~~d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 77 ALS-----DNDADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp ECS-----SCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred Eec-----CChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 542 22344455566677777777777654
No 334
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.16 E-value=0.031 Score=48.26 Aligned_cols=92 Identities=23% Similarity=0.232 Sum_probs=60.9
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEE---cccCCCCCCCCeeEEEe
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLK---ADFFTWCPTELFDLIFD 180 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~fD~v~~ 180 (274)
..++.+||-+|+|. |..+..+++ .|++|+++|.+++.++.+++.-. + .++. .|..... .+.+|+|+.
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa-----~--~vi~~~~~~~~~~~-~~g~Dvvid 263 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA-----D--EVVNSRNADEMAAH-LKSFDFILN 263 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-----S--EEEETTCHHHHHTT-TTCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-----c--EEeccccHHHHHHh-hcCCCEEEE
Confidence 34568999999874 677777777 78899999999998888876321 1 1111 1111111 157999985
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
...-. ..++...++|+++|.++...
T Consensus 264 ~~g~~--------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 264 TVAAP--------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CCSSC--------CCHHHHHTTEEEEEEEEECC
T ss_pred CCCCH--------HHHHHHHHHhccCCEEEEec
Confidence 43211 12467789999999988754
No 335
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.16 E-value=0.1 Score=45.41 Aligned_cols=101 Identities=15% Similarity=0.040 Sum_probs=63.5
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---cc-CC----CCCCCC
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DF-FT----WCPTEL 174 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~-~~----~~~~~~ 174 (274)
..++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++. + .+.+.. |. .+ ......
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~~i~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----G----FETIDLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----T----CEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----C----CcEEcCCCcchHHHHHHHHhCCCC
Confidence 34568999999976 777888877 688 999999999988887643 2 122221 11 11 111236
Q ss_pred eeEEEecccccccC--h----hHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 175 FDLIFDYTFFCAIE--P----EMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 fD~v~~~~~~~~~~--~----~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+|+..-.-.... . ......+....++|++||++++...
T Consensus 255 ~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 255 VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 99998653321100 0 0011346788899999999886543
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.14 E-value=0.66 Score=43.43 Aligned_cols=151 Identities=12% Similarity=0.120 Sum_probs=95.4
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCC----------CCeEEEEeCChHHHHHHHHHhhcCC-----------
Q 024008 97 IIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASP----------ERYVVGLEISDIAIKKAEELSSSLP----------- 154 (274)
Q Consensus 97 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~----------~~~v~~iD~s~~~~~~a~~~~~~~~----------- 154 (274)
.+.+++... ..+...|+-+|||-=.....+... +..++=+|. |+.++.=++.+...+
T Consensus 95 ~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~ 173 (695)
T 2zwa_A 95 RLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSED 173 (695)
T ss_dssp HHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSS
T ss_pred HHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccc
Confidence 345555543 223468999999987777777553 335555665 455544444443110
Q ss_pred --C----------CcceEEEEcccCCC-----------C-CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEE
Q 024008 155 --N----------AKFVSFLKADFFTW-----------C-PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 155 --~----------~~~v~~~~~d~~~~-----------~-~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~ 210 (274)
. +.+..++.+|+.+. . ..+..-++++-.++.|++++....+++.+.+. +++.++
T Consensus 174 ~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~ 251 (695)
T 2zwa_A 174 KDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFI 251 (695)
T ss_dssp CSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEE
T ss_pred cccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEE
Confidence 0 13688999999862 1 33445677778999999999999999988864 577666
Q ss_pred EEEccCCC-C-------------CCCCC-----cccCHHHHHHHHhcCCCcEEEEeecc
Q 024008 211 TLMFPISD-H-------------VGGPP-----YKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 211 ~~~~~~~~-~-------------~~~~~-----~~~~~~~~~~~~~~~Gf~~~~~~~~~ 250 (274)
+.+.-... . ..+.+ ...+.++..+.|.++||..+...+..
T Consensus 252 ~~e~~~~~~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~ 310 (695)
T 2zwa_A 252 ILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMF 310 (695)
T ss_dssp EEEECCTTCTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHH
T ss_pred EEEeecCCCCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHH
Confidence 65532221 0 01111 22368899999999999877666533
No 337
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.07 E-value=0.0096 Score=51.30 Aligned_cols=93 Identities=16% Similarity=0.044 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCeeE
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------~~~~~~fD~ 177 (274)
.++.+||-+|+|. |..+..+++ .|++|+++|.+++.++.+++.-. ..++..+..+ ......+|+
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA-------DHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC-------CEEEcCCcccHHHHHHHHhCCCCceE
Confidence 4567999999775 666667766 88999999999999988876531 1122211111 112347999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
|+.... . ..+....++|+++|.+++....
T Consensus 261 vid~~g-~--------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 261 ILEIAG-G--------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEEETT-S--------SCHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCC-h--------HHHHHHHHHhhcCCEEEEEecC
Confidence 986433 1 1356788899999999887543
No 338
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.06 E-value=0.03 Score=47.66 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=62.6
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC-C-CCCCCeeEE
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT-W-CPTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~-~-~~~~~fD~v 178 (274)
..++.+||-.|+|. |..+..+++ .|++|+++|.+++..+.+++.-. + ..+.. |+.+ . ...+.+|+|
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGA-----E--VAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC-----S--EEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCC-----C--EEEeCCCcCHHHHHHHhCCCCCEE
Confidence 34567999999875 777888877 78999999999999998876421 1 11211 1111 0 011368998
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+.... . ...++...++|+++|.+++...
T Consensus 237 id~~g----~----~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 237 LVTAV----S----PKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EESSC----C----HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEeCC----C----HHHHHHHHHHhccCCEEEEeCC
Confidence 85322 1 2356788899999999987643
No 339
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.94 E-value=0.66 Score=33.12 Aligned_cols=106 Identities=15% Similarity=0.130 Sum_probs=61.6
Q ss_pred CeEEEEcCCcchhHHHh----hCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEEe
Q 024008 110 GRALVPGCGTGYDVVAM----ASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIFD 180 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l----~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~~ 180 (274)
++|+=+|+| ..+..+ .+.|.+|+++|.+++.++..++.. .+.++.+|..+. .....+|+|+.
T Consensus 5 m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-------~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 5 MYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-------CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 578888874 444433 347889999999998776665432 245667776541 11346899886
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEE
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~ 244 (274)
... .+.....+..+.+.+.++ .+++...+ .+..+.++..|...+
T Consensus 76 ~~~-----~~~~~~~~~~~~~~~~~~-~ii~~~~~--------------~~~~~~l~~~g~~~v 119 (140)
T 1lss_A 76 VTG-----KEEVNLMSSLLAKSYGIN-KTIARISE--------------IEYKDVFERLGVDVV 119 (140)
T ss_dssp CCS-----CHHHHHHHHHHHHHTTCC-CEEEECSS--------------TTHHHHHHHTTCSEE
T ss_pred eeC-----CchHHHHHHHHHHHcCCC-EEEEEecC--------------HhHHHHHHHcCCCEE
Confidence 522 122233445556667775 44443311 123456677886543
No 340
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.94 E-value=0.032 Score=48.77 Aligned_cols=98 Identities=16% Similarity=0.145 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEE---cccCC----CCCCCCee
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLK---ADFFT----WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~----~~~~~~fD 176 (274)
.++.+||=+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-.. .++. .|+.+ ......+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-------~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD-------HVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS-------EEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC-------EEEcCCCCCHHHHHHHHhCCCCCC
Confidence 4567999999854 566666666 788 999999999999998765311 1111 11111 12234799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+..-.-. .......++.+.++++++|.+++...
T Consensus 285 ~vid~~g~~---~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 285 LFLEATGVP---QLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp EEEECSSCH---HHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred EEEECCCCc---HHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 998532111 01222333333455599999988653
No 341
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.83 E-value=0.63 Score=35.34 Aligned_cols=110 Identities=16% Similarity=0.128 Sum_probs=63.5
Q ss_pred CCeEEEEcCCc-chhH-HHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----C-CCCCeeEEE
Q 024008 109 KGRALVPGCGT-GYDV-VAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----C-PTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~-G~~~-~~l~~~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~fD~v~ 179 (274)
+.+|+=+|+|. |... ..|.+. |..|+++|.+++.++.+++. + +..+.+|..+. . .-..+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~----g----~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE----G----RNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT----T----CCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC----C----CCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 46899998764 2222 233346 89999999999887776532 1 45667776541 1 235689888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
... +.+.....+-...+.+.|++.++.... ..+..+.+++.|-..+.
T Consensus 111 ~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~~--------------~~~~~~~l~~~G~~~vi 157 (183)
T 3c85_A 111 LAM-----PHHQGNQTALEQLQRRNYKGQIAAIAE--------------YPDQLEGLLESGVDAAF 157 (183)
T ss_dssp ECC-----SSHHHHHHHHHHHHHTTCCSEEEEEES--------------SHHHHHHHHHHTCSEEE
T ss_pred EeC-----CChHHHHHHHHHHHHHCCCCEEEEEEC--------------CHHHHHHHHHcCCCEEE
Confidence 532 112222223345555667777776541 12334466666766543
No 342
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.82 E-value=0.22 Score=43.13 Aligned_cols=43 Identities=21% Similarity=0.155 Sum_probs=34.0
Q ss_pred CeEEEEcCCcchhHHHhhC---------CCCeEEEEeCChHHHHHHHHHhhc
Q 024008 110 GRALVPGCGTGYDVVAMAS---------PERYVVGLEISDIAIKKAEELSSS 152 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~---------~~~~v~~iD~s~~~~~~a~~~~~~ 152 (274)
-.|+|+|+|.|.++..+.+ ...+++.||+|+...+.-++++..
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 4799999999999876653 224899999999988877766644
No 343
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.74 E-value=0.033 Score=48.04 Aligned_cols=97 Identities=16% Similarity=0.127 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---C---CCCCCee
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---W---CPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~---~~~~~fD 176 (274)
..++.+||-.|+|. |..+..+++ .|+ +|+++|.+++..+.+++.-.. .-++....|+.+ . ...+.+|
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----~vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT----ATVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS----EEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC----EEECCCCcCHHHHHHhhhhccCCCCC
Confidence 34568999999865 666777776 788 899999999999988775311 001111112111 0 1224799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+..-.- ...+....++|++||.+++...
T Consensus 256 vvid~~G~--------~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 256 VVIECAGV--------AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp EEEECSCC--------HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEEECCCC--------HHHHHHHHHHhccCCEEEEEec
Confidence 99953210 2356788899999999988654
No 344
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.62 E-value=0.36 Score=42.26 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=62.4
Q ss_pred CCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024008 109 KGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~ 179 (274)
..+|+=+|+|. .+..++ ..|..|+++|.+++.++.++.. .+.++.+|..+. ..-...|+|+
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~--------g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSSGVKMVVLDHDPDHIETLRKF--------GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT--------TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC--------CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 35788888854 444433 3789999999999999888743 256788998872 2235788887
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+. ++++.....+-...+.+.|+..+++..
T Consensus 74 v~-----~~~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 74 NA-----IDDPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EC-----CSSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EC-----CCChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 53 233444555666777788888887765
No 345
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.57 E-value=0.17 Score=43.91 Aligned_cols=101 Identities=16% Similarity=0.117 Sum_probs=63.6
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---c-cCC----CCCCCC
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---D-FFT----WCPTEL 174 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d-~~~----~~~~~~ 174 (274)
..++.+||-+|+|. |..+.++++ .|+ +|+++|.+++.++.+++.- .+.+.. + +.+ ......
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG--------a~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG--------FEIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT--------CEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC--------CcEEccCCcchHHHHHHHHhCCCC
Confidence 34568999999865 777778877 788 7999999999999887542 122221 1 111 112246
Q ss_pred eeEEEecccccccC-------hhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 175 FDLIFDYTFFCAIE-------PEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 fD~v~~~~~~~~~~-------~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+|+..-.-.... .......+....++|++||.+++...
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 99999653321000 00012356788899999999887543
No 346
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.46 E-value=0.11 Score=44.21 Aligned_cols=94 Identities=17% Similarity=0.094 Sum_probs=61.5
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEE----cccCC----CCC---C
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLK----ADFFT----WCP---T 172 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~----~d~~~----~~~---~ 172 (274)
..++.+||-+|+|. |..+..+++ .|++|+++|.+++.++.+++.- . + ..+. .|..+ ... .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lG----a-~--~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCG----A-D--VTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----C-S--EEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhC----C-C--EEEcCcccccHHHHHHHHhccccC
Confidence 34568999999864 666777776 7889999999999988887532 1 1 1121 11111 011 2
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
..+|+|+....- ...++...++|+++|.++....
T Consensus 239 ~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 239 DLPNVTIDCSGN--------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEec
Confidence 469999854221 1245778899999999887643
No 347
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.32 E-value=0.013 Score=50.02 Aligned_cols=92 Identities=13% Similarity=0.168 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCC--cchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCee
Q 024008 107 LPKGRALVPGCG--TGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G--~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~----~~~~~~fD 176 (274)
.++.+||-+|+| .|..+..+++ .|++|+++|.+++.++.+++.-. .. .+.. |+.+ ......+|
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga------~~-~~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA------AY-VIDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC------SE-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC------cE-EEeCCcccHHHHHHHHhCCCCCc
Confidence 456899999987 5677777776 78899999999988888876421 11 1111 1111 12234799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+.... ... .....++|+++|.++....
T Consensus 216 vvid~~g-----~~~----~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 216 AAIDSIG-----GPD----GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEESSC-----HHH----HHHHHHTEEEEEEEEECCC
T ss_pred EEEECCC-----Chh----HHHHHHHhcCCCEEEEEee
Confidence 9985322 111 2334589999999988654
No 348
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.29 E-value=0.066 Score=43.77 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=56.1
Q ss_pred eEEEEcccCC---CCCCCCeeEEEeccccccc--------Ch----hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCC
Q 024008 159 VSFLKADFFT---WCPTELFDLIFDYTFFCAI--------EP----EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGP 223 (274)
Q Consensus 159 v~~~~~d~~~---~~~~~~fD~v~~~~~~~~~--------~~----~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~ 223 (274)
.+++.+|..+ ..++++||+|++...+..- +. .....++..+.++|+|||.+++....
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d-------- 76 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP-------- 76 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH--------
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc--------
Confidence 4577888765 3456789999998876532 11 23467788899999999999886411
Q ss_pred CcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024008 224 PYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 224 ~~~~~~~~~~~~~~~~Gf~~~~~~~~~~ 251 (274)
.....+..++.+.||.......+..
T Consensus 77 ---~~~~~~~~~~~~~gf~~~~~iiW~K 101 (260)
T 1g60_A 77 ---FNCAFICQYLVSKGMIFQNWITWDK 101 (260)
T ss_dssp ---HHHHHHHHHHHHTTCEEEEEEEECC
T ss_pred ---HHHHHHHHHHHhhccceeEEEEEEe
Confidence 1234566678888998777555443
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.25 E-value=0.03 Score=47.81 Aligned_cols=92 Identities=17% Similarity=0.209 Sum_probs=60.4
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCeeE
Q 024008 108 PKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELFDL 177 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~----~~~~~~fD~ 177 (274)
++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-. + .++.. |+.+ ......+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga-----~--~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA-----D--YVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC-----S--EEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-----C--EEECCCCcCHHHHHHHHcCCCCCCE
Confidence 678999999853 566666666 788 99999999998888875421 1 11111 1111 112246999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
|+..... ...+....++|+++|.++....
T Consensus 240 vid~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 240 FLEFSGA--------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEECSCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCC--------HHHHHHHHHHHhcCCEEEEEcc
Confidence 9854321 2346778899999999887643
No 350
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.23 E-value=0.053 Score=45.88 Aligned_cols=90 Identities=20% Similarity=0.134 Sum_probs=59.2
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.|| |.|..+..+++ .|++|+++|.+++.++.+++. +. ...+ |..+ ....+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~--~~~~---d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GF--DAAF---NYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC--SEEE---ETTSCSCHHHHHHHHCTTC
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CC--cEEE---ecCCHHHHHHHHHHHhCCC
Confidence 45679999998 56666666655 889999999999888877433 11 1111 2221 001247
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+++.+..- ..+....++|++||++++...
T Consensus 215 ~d~vi~~~g~---------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 215 YDCYFDNVGG---------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEEEESSCH---------HHHHHHHTTEEEEEEEEECCC
T ss_pred CeEEEECCCh---------HHHHHHHHHHhcCCEEEEEec
Confidence 9999855331 236778899999999887543
No 351
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.20 E-value=0.059 Score=45.24 Aligned_cols=87 Identities=17% Similarity=0.179 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCC-cchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024008 107 LPKGRALVPGCG-TGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G-~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 184 (274)
.++.+||-+|+| .|..+..+++ .|++|++++ +++..+.+++.-. ..++ .| .+.. ...+|+|+..-.
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa-------~~v~-~d-~~~v-~~g~Dvv~d~~g- 208 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGV-------RHLY-RE-PSQV-TQKYFAIFDAVN- 208 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTE-------EEEE-SS-GGGC-CSCEEEEECC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCC-------CEEE-cC-HHHh-CCCccEEEECCC-
Confidence 456899999985 3677777777 788999999 9988888876431 1112 24 2222 568999984321
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
. + .+....++|+++|+++...
T Consensus 209 -~---~----~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 -S---Q----NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -------------TTGGGEEEEEEEEEEC
T ss_pred -c---h----hHHHHHHHhcCCCEEEEEe
Confidence 1 1 1256789999999988874
No 352
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.09 E-value=0.2 Score=42.32 Aligned_cols=94 Identities=12% Similarity=0.000 Sum_probs=61.2
Q ss_pred CCCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC---CCCCCCee
Q 024008 106 ALPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT---WCPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~---~~~~~~fD 176 (274)
..++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+.+.+ +. ...+.. |+.+ ....+.+|
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~---~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GF---DGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CC---SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC---CEEEECCCHHHHHHHHHhcCCCce
Confidence 345689999998 56777777766 8899999999998888774333 11 111111 1111 01134799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+.+.. . ..+....++|+++|.+++...
T Consensus 221 ~vi~~~g-----~----~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 221 VFFDNVG-----G----EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEESSC-----H----HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCC-----c----chHHHHHHHHhhCCEEEEEee
Confidence 9985322 1 256788899999999887653
No 353
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.09 E-value=0.3 Score=47.53 Aligned_cols=132 Identities=12% Similarity=-0.026 Sum_probs=80.5
Q ss_pred CeEEEEcCCcchhHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEccc------------CC-----CC
Q 024008 110 GRALVPGCGTGYDVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADF------------FT-----WC 170 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~--~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~------------~~-----~~ 170 (274)
.+++|+-||.|.+..-|.+.|. .+.++|+++.+++..+.|.+. ..++.+|+ .. ..
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~------~~~~~~DI~~l~~~~~~~di~~~~~~~lp 614 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPG------STVFTEDCNILLKLVMAGETTNSRGQRLP 614 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTT------SEEECSCHHHHHHHHHHTCSBCTTCCBCC
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC------CccccccHHHHhhhccchhhhhhhhhhcc
Confidence 5899999999999999988887 578999999999988888743 34444443 21 11
Q ss_pred CCCCeeEEEecccccccChh----------HH---HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHh
Q 024008 171 PTELFDLIFDYTFFCAIEPE----------MR---AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~~~~~~----------~~---~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (274)
..+.+|+|+.......++.. .+ -..+-++.+.++|. +++.+....... .........+.+.|+
T Consensus 615 ~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk--~~llENV~glls--~~~~~~~~~i~~~L~ 690 (1002)
T 3swr_A 615 QKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR--FFLLENVRNFVS--FKRSMVLKLTLRCLV 690 (1002)
T ss_dssp CTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCS--EEEEEEEGGGGT--TGGGHHHHHHHHHHH
T ss_pred cCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCC--EEEEeccHHHhc--cCcchHHHHHHHHHH
Confidence 23579999988765554310 01 11123445556664 344332221110 001123567788888
Q ss_pred cCCCcEEEEeeccc
Q 024008 238 PMGFQAISIVDNKL 251 (274)
Q Consensus 238 ~~Gf~~~~~~~~~~ 251 (274)
..||.+....-...
T Consensus 691 ~lGY~v~~~vLnA~ 704 (1002)
T 3swr_A 691 RMGYQCTFGVLQAG 704 (1002)
T ss_dssp HHTCEEEEEEEEGG
T ss_pred hcCCeEEEEEEEHH
Confidence 99998755444333
No 354
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.07 E-value=0.41 Score=37.62 Aligned_cols=89 Identities=8% Similarity=-0.031 Sum_probs=57.6
Q ss_pred eEEEEcCCcchhHHHhhC----CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEEec
Q 024008 111 RALVPGCGTGYDVVAMAS----PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIFDY 181 (274)
Q Consensus 111 ~vLDiG~G~G~~~~~l~~----~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~~~ 181 (274)
+|+=+|+ |..+..+++ .|..|+++|.+++.++...+.. .+.++.+|..+. ..-..+|+|++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 5666776 556555544 7899999999999887765432 267889998762 123568988853
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.+.+.....+..+.+.+.+...++...
T Consensus 73 -----~~~d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 73 -----TPRDEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp -----CSCHHHHHHHHHHHHHTSCCCEEEECC
T ss_pred -----cCCcHHHHHHHHHHHHHcCCCeEEEEE
Confidence 223344455566666666666666544
No 355
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.04 E-value=0.017 Score=48.86 Aligned_cols=93 Identities=14% Similarity=0.044 Sum_probs=61.7
Q ss_pred CCCCeEEEEc--CCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024008 107 LPKGRALVPG--CGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG--~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------~~~~~~fD 176 (274)
.++.+||-.| +|.|..+..+++ .|++|++++.+++.++.+++.-. + ..+..+-.+ ......+|
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga-----~--~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA-----W--ETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC-----S--EEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-----C--EEEeCCCccHHHHHHHHhCCCCce
Confidence 4567999998 355777777766 78899999999999988876421 1 112111111 12234799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
+|+....- ..+....++|+++|.+++....
T Consensus 212 vvid~~g~---------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 212 VVYDGVGQ---------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp EEEESSCG---------GGHHHHHTTEEEEEEEEECCCT
T ss_pred EEEECCCh---------HHHHHHHHHhcCCCEEEEEecC
Confidence 99864321 2356788999999999886543
No 356
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.94 E-value=0.071 Score=45.36 Aligned_cols=95 Identities=14% Similarity=0.125 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-C--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEE-cccCC-CCCCCCeeEEEec
Q 024008 108 PKGRALVPGCGT-GYDVVAMAS-P--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLK-ADFFT-WCPTELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~--~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~-~d~~~-~~~~~~fD~v~~~ 181 (274)
++.+||-+|+|. |..+..+++ . |++|+++|.+++.++.+++.-.. .-++... .|... ......+|+|+..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~~~~~g~g~D~vid~ 245 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD----YVSEMKDAESLINKLTDGLGASIAIDL 245 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS----EEECHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC----EEeccccchHHHHHhhcCCCccEEEEC
Confidence 678999999864 666677776 5 89999999999999888764211 0011001 11111 1112379999854
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
-.- ...++...++|+++|.++....
T Consensus 246 ~g~--------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 246 VGT--------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp SCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC--------hHHHHHHHHHhhcCCEEEEeCC
Confidence 221 1346788899999999887653
No 357
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.93 E-value=0.02 Score=48.66 Aligned_cols=92 Identities=15% Similarity=0.078 Sum_probs=60.8
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------~~~~~~fD 176 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.- . ...+..+-.+ ......+|
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g----a---~~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYG----A---EYLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT----C---SEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC----C---cEEEeCCCchHHHHHHHHhCCCCce
Confidence 45689999994 55666666666 8899999999999888886632 1 1122111111 11234799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+....- ..+....++|+++|.++....
T Consensus 220 ~vid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 220 ASFDSVGK---------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEECCGG---------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCh---------HHHHHHHHHhccCCEEEEEcC
Confidence 99864321 235678889999999888653
No 358
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.71 E-value=0.11 Score=44.09 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=61.3
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.- . + ..+ |..+ ......
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g----a-~--~~~--d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALG----A-D--ETV--NYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT----C-S--EEE--ETTSTTHHHHHHHHTTTTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC----C-C--EEE--cCCcccHHHHHHHHhCCCC
Confidence 35689999998 66777777766 7899999999999888887531 1 1 111 2211 112247
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+|+.... . ..+....++|+++|+++....
T Consensus 236 ~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 236 ADKVVDHTG-A--------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EEEEEESSC-S--------SSHHHHHHHEEEEEEEEESSC
T ss_pred ceEEEECCC-H--------HHHHHHHHhhccCCEEEEEec
Confidence 999996543 2 135678889999999887543
No 359
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.55 E-value=1.6 Score=35.42 Aligned_cols=74 Identities=20% Similarity=0.195 Sum_probs=55.1
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 172 (274)
++++.+|=-|++.|. .+..|++.|++|+.+|.+++.++...+.+...+ .++.++.+|+.+... -
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 457788888887774 345666799999999999999988888776665 468889999976211 1
Q ss_pred CCeeEEEecc
Q 024008 173 ELFDLIFDYT 182 (274)
Q Consensus 173 ~~fD~v~~~~ 182 (274)
++.|+++.+.
T Consensus 83 G~iDiLVNNA 92 (254)
T 4fn4_A 83 SRIDVLCNNA 92 (254)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4677777664
No 360
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.52 E-value=0.92 Score=37.02 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=68.3
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC------------hHHHHHHHHHhhcCCCCcceEEEEcccCCCCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS------------DIAIKKAEELSSSLPNAKFVSFLKADFFTWCP 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 171 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+ .+.++.+.......+ .++.++.+|+.+...
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 446788888887653 244556689999999987 666666655554443 568999999987211
Q ss_pred -----------CCCeeEEEecccccc----cChhHHH-----------HHHHHHHhcccCCcEEEEEE
Q 024008 172 -----------TELFDLIFDYTFFCA----IEPEMRA-----------AWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 -----------~~~fD~v~~~~~~~~----~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~ 213 (274)
.++.|+++.+..+.. .+.+.+. .+++.+...++.+|.++...
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 137899998765432 2223322 34466677777788877644
No 361
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.43 E-value=0.02 Score=48.83 Aligned_cols=92 Identities=16% Similarity=0.148 Sum_probs=60.8
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc--cCC----CCCCCCeeE
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD--FFT----WCPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~----~~~~~~fD~ 177 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++..+.+++.-. + .++..+ +.+ ......+|+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga-----~--~v~~~~~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA-----D--IVLPLEEGWAKAVREATGGAGVDM 230 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-----S--EEEESSTTHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-----c--EEecCchhHHHHHHHHhCCCCceE
Confidence 45679999997 55777777776 88999999999988888876421 1 122222 111 122347999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
|+....- ..+....++|+++|.+++...
T Consensus 231 vid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 231 VVDPIGG---------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEESCC-----------CHHHHHHTEEEEEEEEEC--
T ss_pred EEECCch---------hHHHHHHHhhcCCCEEEEEEc
Confidence 9864321 135678899999999987653
No 362
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.31 E-value=0.29 Score=41.29 Aligned_cols=90 Identities=10% Similarity=0.080 Sum_probs=58.3
Q ss_pred ceEEE-EcccCC---CCCCCCeeEEEeccccccc------C---hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCC
Q 024008 158 FVSFL-KADFFT---WCPTELFDLIFDYTFFCAI------E---PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPP 224 (274)
Q Consensus 158 ~v~~~-~~d~~~---~~~~~~fD~v~~~~~~~~~------~---~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~ 224 (274)
...++ .+|..+ ..++++||+|++...+..- . ......++..+.++|+|||.+++..-.... +..
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~---~~~ 114 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQ---GEA 114 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCC---CCT
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccc---ccc
Confidence 46677 899876 4566789999998887532 0 124567788899999999999886532211 000
Q ss_pred cccCHHHHHHHHhcCC-CcEEEEeecc
Q 024008 225 YKVSVSDYEEVLQPMG-FQAISIVDNK 250 (274)
Q Consensus 225 ~~~~~~~~~~~~~~~G-f~~~~~~~~~ 250 (274)
.......+...+...| |......-+.
T Consensus 115 ~~~~l~~l~~~i~~~G~~~~~~~IIW~ 141 (319)
T 1eg2_A 115 GSGDLISIISHMRQNSKMLLANLIIWN 141 (319)
T ss_dssp TBCCHHHHHHHHHHHCCCEEEEEEEEE
T ss_pred ccccHHHHHHHHhCcccceeEEEEEEE
Confidence 1113356666667777 8877655443
No 363
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.28 E-value=0.4 Score=40.57 Aligned_cols=94 Identities=16% Similarity=0.075 Sum_probs=60.8
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC---CCCCCCeeE
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT---WCPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~---~~~~~~fD~ 177 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.+ +. ...+-.. ++.+ ....+.+|+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~~~d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GF--DDAFNYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CC--SEEEETTSCSCSHHHHHHHCTTCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC--ceEEecCCHHHHHHHHHHHhCCCCcE
Confidence 45679999997 56777777666 7899999999998888876433 21 1111101 1111 001246999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
|+.+.. . ..+....++|+++|.+++...
T Consensus 229 vi~~~g------~---~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 229 YFENVG------G---KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEESSC------H---HHHHHHHTTEEEEEEEEECCC
T ss_pred EEECCC------H---HHHHHHHHHHhcCCEEEEEcc
Confidence 985432 1 246788899999999887643
No 364
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.20 E-value=1.3 Score=35.69 Aligned_cols=107 Identities=14% Similarity=0.124 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCC--cch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024008 107 LPKGRALVPGCG--TGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G--~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++ .|. .+..|++.|++|+.++.++...+.+.+.....+. .++.++.+|+.+...
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHH
Confidence 446788888876 332 3456666899999999887665665555544331 368999999986321
Q ss_pred -CCCeeEEEecccccc----------cChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024008 172 -TELFDLIFDYTFFCA----------IEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 -~~~fD~v~~~~~~~~----------~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.++.|+++.+..+.. .+.+... .+++.+...++++|.++....
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 146899988754332 2323322 345667777788888776653
No 365
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.18 E-value=0.047 Score=46.82 Aligned_cols=95 Identities=14% Similarity=0.118 Sum_probs=60.4
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc----ccCCCCCCCCeeEEE
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA----DFFTWCPTELFDLIF 179 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~----d~~~~~~~~~fD~v~ 179 (274)
..++.+||-+|+|. |..+..+++ .|++|+++|.+++.++.+++.-. + .++.. |+.+... +.+|+|+
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~v~~~~~~~~~~~~~~-~~~D~vi 248 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA-----D--HYIATLEEGDWGEKYF-DTFDLIV 248 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC-----S--EEEEGGGTSCHHHHSC-SCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC-----C--EEEcCcCchHHHHHhh-cCCCEEE
Confidence 34568999999853 666677766 78899999999988888876421 1 12221 1111111 5799999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
....-. +. ..+....++|+++|.++....
T Consensus 249 d~~g~~--~~----~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 249 VCASSL--TD----IDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ECCSCS--TT----CCTTTGGGGEEEEEEEEECCC
T ss_pred ECCCCC--cH----HHHHHHHHHhcCCCEEEEecC
Confidence 653320 00 123567789999999887543
No 366
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=93.12 E-value=0.83 Score=43.40 Aligned_cols=43 Identities=9% Similarity=-0.028 Sum_probs=36.4
Q ss_pred CCeEEEEcCCcchhHHHhhCCC------C-eEEEEeCChHHHHHHHHHhh
Q 024008 109 KGRALVPGCGTGYDVVAMASPE------R-YVVGLEISDIAIKKAEELSS 151 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~~------~-~v~~iD~s~~~~~~a~~~~~ 151 (274)
..+|+|+-||.|+++.-|.+.| + .+.++|+++.+++--+.|.+
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 3689999999999998887655 3 57899999999999888864
No 367
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.06 E-value=0.099 Score=44.85 Aligned_cols=93 Identities=22% Similarity=0.139 Sum_probs=61.9
Q ss_pred CCCCCeEEEEc--CCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC---CCCCCCee
Q 024008 106 ALPKGRALVPG--CGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT---WCPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG--~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~---~~~~~~fD 176 (274)
..++.+||-.| .|.|..+..+++ .|++|++++.+++.++.+++. +. + .++.. |+.+ ......+|
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga-~--~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL----GC-D--RPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC-S--EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc----CC-c--EEEecCChhHHHHHHHhcCCCCC
Confidence 34568999999 567777777776 788999999999888888763 21 1 11211 1111 01124699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+.... . ..+..+.++|+++|.++....
T Consensus 234 ~vid~~g-----~----~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 234 VVYESVG-----G----AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEECSC-----T----HHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCC-----H----HHHHHHHHHHhcCCEEEEEeC
Confidence 9985432 1 246788899999999887654
No 368
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.04 E-value=0.26 Score=42.54 Aligned_cols=93 Identities=18% Similarity=0.100 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc------ccCC----CCCCC
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA------DFFT----WCPTE 173 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~------d~~~----~~~~~ 173 (274)
.++.+||-+|+|. |..+..+++ .| .+|++++.+++.++.+++.- . + .++.. |+.+ .....
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG----a-~--~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG----A-D--LTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTT----C-S--EEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcC----C-c--EEEeccccCcchHHHHHHHHhCCC
Confidence 3567999999653 566667776 78 59999999999988887532 1 1 12221 1111 12223
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.+|+|+....- ...+....++|+++|.++....
T Consensus 267 g~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 267 GADFILEATGD--------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp CEEEEEECSSC--------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEEec
Confidence 69999854321 1245778899999999887653
No 369
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=92.88 E-value=0.85 Score=45.72 Aligned_cols=130 Identities=13% Similarity=0.007 Sum_probs=80.0
Q ss_pred CCeEEEEcCCcchhHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC------------C-----C
Q 024008 109 KGRALVPGCGTGYDVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF------------T-----W 169 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~~~--~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~------------~-----~ 169 (274)
..+++|+-||.|++..-+...|. .+.++|+++.+++.-+.|.+. ..++.+|+. . .
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~------~~~~~~DI~~l~~~~~~gdi~~~~~~~l 924 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPG------TTVFTEDCNVLLKLVMAGEVTNSLGQRL 924 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTT------SEEECSCHHHHHHHHTTTCSBCSSCCBC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC------CcEeeccHHHHhHhhhccchhhhhhhhc
Confidence 46899999999999999998997 588999999999988888642 334444432 1 1
Q ss_pred CCCCCeeEEEecccccccCh----------hHHHHH---HHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH
Q 024008 170 CPTELFDLIFDYTFFCAIEP----------EMRAAW---AQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL 236 (274)
Q Consensus 170 ~~~~~fD~v~~~~~~~~~~~----------~~~~~~---l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (274)
...+.+|+|+.......++. +.+..+ +-++.+.++|. +++.+........ ........+.+.|
T Consensus 925 p~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk--~fv~ENV~glls~--~~g~~~~~il~~L 1000 (1330)
T 3av4_A 925 PQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR--FFLLENVRNFVSY--RRSMVLKLTLRCL 1000 (1330)
T ss_dssp CCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCS--EEEEEEEGGGGTT--TTTHHHHHHHHHH
T ss_pred cccCccceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCc--EEEEeccHHHhcc--CccHHHHHHHHHH
Confidence 11346899998766555431 111111 23444556775 4444422211100 0112356788888
Q ss_pred hcCCCcEEEEee
Q 024008 237 QPMGFQAISIVD 248 (274)
Q Consensus 237 ~~~Gf~~~~~~~ 248 (274)
+..||.+....-
T Consensus 1001 ~~lGY~v~~~vL 1012 (1330)
T 3av4_A 1001 VRMGYQCTFGVL 1012 (1330)
T ss_dssp HHHTCEEEEEEE
T ss_pred HhcCCeeeEEEe
Confidence 899998765433
No 370
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.82 E-value=0.83 Score=33.97 Aligned_cols=99 Identities=15% Similarity=0.061 Sum_probs=57.4
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC------CCCeeE
Q 024008 106 ALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP------TELFDL 177 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~fD~ 177 (274)
....+-|||+|-|.|..--.+.+ ++..|+++|-.-. .......+.-.++.+|+.+..+ ..+.-+
T Consensus 38 ~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~--------~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~L 109 (174)
T 3iht_A 38 AGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVA--------SHPDSTPPEAQLILGDIRETLPATLERFGATASL 109 (174)
T ss_dssp TTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCC--------CCGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEE
T ss_pred cCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeec--------cCCCCCCchHheecccHHHHHHHHHHhcCCceEE
Confidence 34457899999999999988888 8889999996311 0000011234677777766221 122222
Q ss_pred EEecccccccCh--hHHHHHHHHHHhcccCCcEEEEE
Q 024008 178 IFDYTFFCAIEP--EMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 178 v~~~~~~~~~~~--~~~~~~l~~l~~~L~~gG~l~~~ 212 (274)
+.+-.-.++-+. .....+-..+..+|+|||+++..
T Consensus 110 aHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 110 VHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred EEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 322222221111 12234446677889999988763
No 371
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.69 E-value=0.048 Score=46.69 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=58.9
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------~~~~~~fD 176 (274)
.++.+||-.|+ |.|..+..+++ .|++|+++|.+++.++.+++.-. + . .+..+-.+ ......+|
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~-----~-~-~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA-----A-A-GFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC-----S-E-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC-----c-E-EEecCChHHHHHHHHHhcCCCce
Confidence 35679999984 55666666665 78999999999998888854421 1 1 11111111 11224699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+++.+..-. .+....++|+++|.++....
T Consensus 234 ~vi~~~G~~---------~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 234 LILDCIGGS---------YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEESSCGG---------GHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCch---------HHHHHHHhccCCCEEEEEec
Confidence 998654311 24667889999999887653
No 372
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.66 E-value=0.053 Score=46.85 Aligned_cols=93 Identities=15% Similarity=0.175 Sum_probs=60.6
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-----ccCC---CCCCCCe
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-----DFFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~---~~~~~~f 175 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++. |. ..++.. |+.+ ....+.+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----Ga---~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----GV---NEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----TC---CEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CC---cEEEccccCchhHHHHHHHhcCCCC
Confidence 4567999999863 667777776 687 899999999988888643 21 111211 1111 0112379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~g-G~l~~~~~ 214 (274)
|+|+..-. . ...+....++|++| |++++...
T Consensus 265 D~vid~~g-----~---~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 265 DYSFECIG-----N---VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp SEEEECSC-----C---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CEEEECCC-----C---HHHHHHHHHHhhccCCEEEEEcc
Confidence 99985322 1 23567889999997 99887654
No 373
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=92.64 E-value=1.1 Score=36.47 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=53.7
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------C
Q 024008 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------P 171 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~ 171 (274)
.+.++.+|=-|++.|. .+..|++.|++|+..|.+++.++.+.+.+...+ .++.++.+|+.+.. .
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 3567788888877763 345666699999999999998888777776655 46788888887521 1
Q ss_pred CCCeeEEEeccc
Q 024008 172 TELFDLIFDYTF 183 (274)
Q Consensus 172 ~~~fD~v~~~~~ 183 (274)
.++.|+++.+.-
T Consensus 84 ~G~iDiLVNNAG 95 (255)
T 4g81_D 84 GIHVDILINNAG 95 (255)
T ss_dssp TCCCCEEEECCC
T ss_pred CCCCcEEEECCC
Confidence 245676666543
No 374
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.63 E-value=0.023 Score=48.45 Aligned_cols=90 Identities=13% Similarity=0.159 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCeeE
Q 024008 108 PKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELFDL 177 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~----~~~~~~fD~ 177 (274)
++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++. . + .++.. |+.+ .. ...+|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~-~~g~D~ 234 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVT-GSGVEV 234 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHH-SSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhc-CCCCCE
Confidence 678999999853 566667766 788 999999999877776543 1 1 11111 1111 11 346999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
|+....- ...++...++|+++|.++....
T Consensus 235 vid~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 235 LLEFSGN--------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEECSCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCC--------HHHHHHHHHHHhcCCEEEEEec
Confidence 9854221 1346788899999999887643
No 375
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.57 E-value=0.4 Score=40.89 Aligned_cols=87 Identities=24% Similarity=0.200 Sum_probs=57.8
Q ss_pred CeEEEEcCCc-chhH-HHhh-C-CCCe-EEEEeCChH---HHHHHHHHhhcCCCCcceEEEEcccCCCCC------CCCe
Q 024008 110 GRALVPGCGT-GYDV-VAMA-S-PERY-VVGLEISDI---AIKKAEELSSSLPNAKFVSFLKADFFTWCP------TELF 175 (274)
Q Consensus 110 ~~vLDiG~G~-G~~~-~~l~-~-~~~~-v~~iD~s~~---~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------~~~f 175 (274)
.+||-+|+|. |..+ ..++ + .|++ |+++|.+++ ..+.+++.- .+.+ |..+... .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lG--------a~~v--~~~~~~~~~i~~~~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELD--------ATYV--DSRQTPVEDVPDVYEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTT--------CEEE--ETTTSCGGGHHHHSCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcC--------Cccc--CCCccCHHHHHHhCCCC
Confidence 8999999753 6677 7788 6 7886 999999887 788876532 1222 2221000 1379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
|+|+..-. . ...+....++|+++|+++....
T Consensus 244 Dvvid~~g-----~---~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 244 DFIYEATG-----F---PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEEEECSC-----C---HHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCC-----C---hHHHHHHHHHHhcCCEEEEEeC
Confidence 99984321 1 1246788899999999887653
No 376
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.56 E-value=0.3 Score=41.47 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=60.6
Q ss_pred CCCCCeEEEEcCC--cchhHHHhhC-C-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc--c----CCCCCCCCe
Q 024008 106 ALPKGRALVPGCG--TGYDVVAMAS-P-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD--F----FTWCPTELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G--~G~~~~~l~~-~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~~~~~~~f 175 (274)
..++.+||-.|+| .|..+..+++ . |++|+++|.+++.++.+++.- . + ..+-..+ . .+....+.+
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g----~-~-~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAG----A-D-YVINASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHT----C-S-EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC----C-C-EEecCCCccHHHHHHHHhcCCCc
Confidence 3456899999997 4555566655 5 899999999999888886542 1 1 1111111 1 001111479
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
|+|+....- ...++...++|+++|.++....
T Consensus 242 d~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 242 DAVIDLNNS--------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEEEESCCC--------HHHHTTGGGGEEEEEEEEECCS
T ss_pred eEEEECCCC--------HHHHHHHHHHHhcCCEEEEECC
Confidence 999854321 1346778899999999887653
No 377
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.54 E-value=0.084 Score=45.45 Aligned_cols=93 Identities=13% Similarity=0.150 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-c----cCC---CCCCCCe
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-D----FFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d----~~~---~~~~~~f 175 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.- . + .++.. + +.+ ....+.+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG----a-~--~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG----A-T--DFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT----C-C--EEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhC----C-c--eEEeccccchhHHHHHHHHhCCCC
Confidence 4567999999864 666777776 788 8999999999888887532 1 1 11111 1 111 0011379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~g-G~l~~~~~ 214 (274)
|+|+..-.- ...+....++|+++ |.+++...
T Consensus 264 D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 264 DFSLECVGN--------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp SEEEECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CEEEECCCC--------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 999853221 23467888999999 99887643
No 378
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.43 E-value=1.8 Score=35.61 Aligned_cols=105 Identities=16% Similarity=0.126 Sum_probs=67.3
Q ss_pred CCCCeEEEEcCCcc-----hhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------
Q 024008 107 LPKGRALVPGCGTG-----YDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----------- 170 (274)
Q Consensus 107 ~~~~~vLDiG~G~G-----~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------- 170 (274)
..++++|=.|++.| ..+..|++.|++|+.++.++...+.+++..... .++.++.+|+.+..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL---GAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH---TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHH
Confidence 45678999997633 234566679999999999876555555444333 25788999998721
Q ss_pred CCCCeeEEEeccccc----------ccChhHH-----------HHHHHHHHhcccCCcEEEEEEc
Q 024008 171 PTELFDLIFDYTFFC----------AIEPEMR-----------AAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~----------~~~~~~~-----------~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
..++.|+++.+..+. ..+.+.+ -.+++.+...++.+|.|+....
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 124789999875543 1222322 2344566667777888776553
No 379
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.43 E-value=0.17 Score=42.43 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=60.0
Q ss_pred eEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEccc--CCCCCCCCeeEEEeccccc
Q 024008 111 RALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADF--FTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 111 ~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~~~~~fD~v~~~~~~~ 185 (274)
+||=.|+ |.|..+..+++ .|++|++++.+++..+.+++.-. + ..+-..+. ......+.+|+|+..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~-~vi~~~~~~~~~~~~~~~~d~v~d~---- 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGA-----N-RILSRDEFAESRPLEKQLWAGAIDT---- 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTC-----S-EEEEGGGSSCCCSSCCCCEEEEEES----
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-----C-EEEecCCHHHHHhhcCCCccEEEEC----
Confidence 5999986 56778888877 88999999999999998876421 1 11111111 111223579998743
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
... ..+....++|+++|+++....
T Consensus 219 -~g~----~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 219 -VGD----KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp -SCH----HHHHHHHHTEEEEEEEEECCC
T ss_pred -CCc----HHHHHHHHHHhcCCEEEEEec
Confidence 221 257888999999999987653
No 380
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.41 E-value=0.086 Score=45.38 Aligned_cols=93 Identities=15% Similarity=0.125 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-----ccCC---CCCCCCe
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-----DFFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~---~~~~~~f 175 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.- . + .++.. |+.+ ....+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG----a-~--~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELG----A-T--ECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTT----C-S--EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcC----C-c--EEEecccccchHHHHHHHHhCCCC
Confidence 4567999999864 666677776 687 8999999999888887532 1 1 11111 1111 0112379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~g-G~l~~~~~ 214 (274)
|+|+..-.- ...+....++|+++ |.+++...
T Consensus 263 Dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 263 DYAVECAGR--------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp SEEEECSCC--------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred CEEEECCCC--------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 999853211 23467888999999 99887653
No 381
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.40 E-value=0.11 Score=44.04 Aligned_cols=92 Identities=17% Similarity=0.097 Sum_probs=60.4
Q ss_pred CCCCCeEEEEcCC-cchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-------CCCCee
Q 024008 106 ALPKGRALVPGCG-TGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-------PTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~G-~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~fD 176 (274)
..++.+||-+|+| .|..+..+++ .|++|+++|.+++.++.+++. +. + .. .|..+.. ..+.+|
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga-~--~~--~d~~~~~~~~~~~~~~~~~d 232 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL----GA-D--LV--VNPLKEDAAKFMKEKVGGVH 232 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TC-S--EE--ECTTTSCHHHHHHHHHSSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC----CC-C--EE--ecCCCccHHHHHHHHhCCCC
Confidence 4456899999985 3666666666 788999999999988888653 11 1 11 1222100 004699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+..... ...++...++|+++|.++....
T Consensus 233 ~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 233 AAVVTAVS--------KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EEEESSCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCC--------HHHHHHHHHHhhcCCEEEEecc
Confidence 99854321 1346788899999999887543
No 382
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.38 E-value=0.08 Score=45.03 Aligned_cols=94 Identities=16% Similarity=0.208 Sum_probs=62.5
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-C-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc--ccCC----CCCCCCee
Q 024008 106 ALPKGRALVPGCGT-GYDVVAMAS-P-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA--DFFT----WCPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~-~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~--d~~~----~~~~~~fD 176 (274)
..++.+||-+|+|. |..+..+++ . +.+|+++|.+++.++.+++.-. + .++.. |..+ ......+|
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-----~--~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-----D--AAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-----S--EEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-----C--EEEcCCCcHHHHHHHHhCCCCCe
Confidence 34568999999865 677777776 4 7799999999999998876421 1 11211 1111 11123799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+..-. . ...++...++|+++|.+++...
T Consensus 242 ~v~d~~G-----~---~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 242 AVFDFVG-----A---QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp EEEESSC-----C---HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEEECCC-----C---HHHHHHHHHHHhcCCEEEEECC
Confidence 9985321 1 2356888999999999988654
No 383
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.36 E-value=0.47 Score=40.21 Aligned_cols=92 Identities=13% Similarity=0.152 Sum_probs=60.7
Q ss_pred CCCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---C------CCCC
Q 024008 106 ALPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---W------CPTE 173 (274)
Q Consensus 106 ~~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~------~~~~ 173 (274)
..++.+||-.|+ |.|..+..+++ .|++|+++|.+++..+.+++. +. . ..+ |..+ . ...+
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~----g~--~-~~~--d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI----GG--E-VFI--DFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT----TC--C-EEE--ETTTCSCHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc----CC--c-eEE--ecCccHhHHHHHHHHhCC
Confidence 345689999998 56677766666 789999999988887777653 21 1 111 3221 0 0012
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.+|+|+.+... ...++.+.++|+++|+++....
T Consensus 238 ~~D~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 238 GAHGVINVSVS--------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp CEEEEEECSSC--------HHHHHHHTTSEEEEEEEEECCC
T ss_pred CCCEEEECCCc--------HHHHHHHHHHHhcCCEEEEEeC
Confidence 69999865321 1356888999999999887643
No 384
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.36 E-value=0.044 Score=46.93 Aligned_cols=91 Identities=20% Similarity=0.139 Sum_probs=60.1
Q ss_pred CCCCeEEEEc--CCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024008 107 LPKGRALVPG--CGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG--~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------~~~~~~fD 176 (274)
.++.+||-.| .|.|..+..+++ .|++|++++.+++.++.+++.-. + ..+..+-.+ .. ...+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~~~~~~~~~~~~~~~~~~-~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA-----K--RGINYRSEDFAAVIKAET-GQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC-----S--EEEETTTSCHHHHHHHHH-SSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-----C--EEEeCCchHHHHHHHHHh-CCCce
Confidence 3567999985 345677777766 88999999999999988876421 1 112111111 11 35799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+....- + .+....++|+++|.+++...
T Consensus 238 vvid~~g~-----~----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 238 IILDMIGA-----A----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEESCCG-----G----GHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCCH-----H----HHHHHHHHhccCCEEEEEEe
Confidence 99864331 1 35678889999999887653
No 385
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.35 E-value=0.062 Score=44.83 Aligned_cols=90 Identities=16% Similarity=0.088 Sum_probs=59.2
Q ss_pred CCCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEE----cccCCCCCCCCeeEE
Q 024008 106 ALPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLK----ADFFTWCPTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~----~d~~~~~~~~~fD~v 178 (274)
..++.+||-.|+ |.|..+..+++ .|++|++++.+++..+.+++. +. + ..+. .|+.+.. +.+|+|
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga-~--~~~~~~~~~~~~~~~--~~~d~v 193 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GA-E--EAATYAEVPERAKAW--GGLDLV 193 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TC-S--EEEEGGGHHHHHHHT--TSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CC-C--EEEECCcchhHHHHh--cCceEE
Confidence 345689999997 55777777776 788999999999888887653 21 1 1121 1111111 579999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+. ..- ..+....++|+++|.++....
T Consensus 194 id-~g~---------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 194 LE-VRG---------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp EE-CSC---------TTHHHHHTTEEEEEEEEEC--
T ss_pred EE-CCH---------HHHHHHHHhhccCCEEEEEeC
Confidence 86 221 135778899999999887543
No 386
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.33 E-value=0.1 Score=44.95 Aligned_cols=93 Identities=15% Similarity=0.172 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-c----cCC---CCCCCCe
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-D----FFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d----~~~---~~~~~~f 175 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-. + .++.. + +.+ ....+.+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-----~--~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-----T--ECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-----S--EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-----c--eEeccccccccHHHHHHHHhCCCC
Confidence 4567999999764 566667766 687 89999999998888875421 1 11111 1 111 0112379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~g-G~l~~~~~ 214 (274)
|+|+..-.- ...+....++|+++ |.+++...
T Consensus 262 D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 262 DYSFECIGN--------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp SEEEECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CEEEECCCc--------HHHHHHHHHhhccCCcEEEEEec
Confidence 999853221 23467888999999 99887653
No 387
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.31 E-value=0.38 Score=41.28 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-----ccCC---CCCCCCe
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-----DFFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~---~~~~~~f 175 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-. + .++.. |+.+ ....+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-----~--~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA-----T--ECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-----S--EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-----c--eEecccccchhHHHHHHHHhCCCC
Confidence 4567999999865 666677776 788 89999999998888865321 1 11211 1111 0112379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~g-G~l~~~~~ 214 (274)
|+|+..-.- ...+....++|+++ |.+++...
T Consensus 263 D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 263 DFSFEVIGR--------LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp SEEEECSCC--------HHHHHHHHHHBCTTTCEEEECSC
T ss_pred cEEEECCCC--------HHHHHHHHHHhhcCCcEEEEecc
Confidence 999853221 13467888999999 99887543
No 388
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.26 E-value=0.096 Score=45.13 Aligned_cols=93 Identities=16% Similarity=0.129 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-----ccCC---CCCCCCe
Q 024008 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-----DFFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~---~~~~~~f 175 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-. + ..+.. |+.+ ....+.+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-----~--~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-----T--DCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-----S--EEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-----c--EEEccccccchHHHHHHHHhCCCc
Confidence 4567999999864 666677776 788 89999999998888865321 1 11111 1111 0011379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~g-G~l~~~~~ 214 (274)
|+|+..-.- ...+....++|+++ |.+++...
T Consensus 267 Dvvid~~G~--------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 267 DYSLDCAGT--------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SEEEESSCC--------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred cEEEECCCC--------HHHHHHHHHHhhcCCCEEEEECC
Confidence 999843211 23467889999999 99887543
No 389
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.23 E-value=0.049 Score=46.58 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=58.7
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++. +. + ..+ |..+ ......
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga-~--~~~--d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GA-H--EVF--NHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC-S--EEE--ETTSTTHHHHHHHHHCTTC
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc----CC-C--EEE--eCCCchHHHHHHHHcCCCC
Confidence 45679999997 55666666665 889999999999888877543 11 1 111 2211 111237
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+|+|+.+.. . ..+....++|+++|.++...
T Consensus 240 ~D~vi~~~G------~---~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 240 IDIIIEMLA------N---VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEEESCH------H---HHHHHHHHHEEEEEEEEECC
T ss_pred cEEEEECCC------h---HHHHHHHHhccCCCEEEEEe
Confidence 999985432 1 23567889999999988765
No 390
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.17 E-value=0.99 Score=36.35 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=67.4
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 172 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+... .++.++.+|+.+... .
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-----PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 456788888877653 234555689999999999988777665542 468899999986211 1
Q ss_pred CCeeEEEecccccc------cChhHHH-----------HHHHHHHhcccCCcEEEEEE
Q 024008 173 ELFDLIFDYTFFCA------IEPEMRA-----------AWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 173 ~~fD~v~~~~~~~~------~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~ 213 (274)
++.|+++.+..... .+.+... .+.+.+...++++|.++...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 47899998754322 2333322 23456666677788776654
No 391
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=92.16 E-value=0.61 Score=38.30 Aligned_cols=81 Identities=14% Similarity=0.139 Sum_probs=53.7
Q ss_pred eEEE-EcccCCCCCCCCeeEEEeccccccc--------Ch-hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccC
Q 024008 159 VSFL-KADFFTWCPTELFDLIFDYTFFCAI--------EP-EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVS 228 (274)
Q Consensus 159 v~~~-~~d~~~~~~~~~fD~v~~~~~~~~~--------~~-~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~ 228 (274)
.++. .+|+..+...+++|+|++...-..- |. .....++....++|+|||.+++-.|...+. .
T Consensus 190 At~~~~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr--------~ 261 (320)
T 2hwk_A 190 ATFRARLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADR--------A 261 (320)
T ss_dssp CSEECCGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSH--------H
T ss_pred ceeecccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcc--------c
Confidence 3444 6777765555789999997553221 11 123346778889999999999988766432 3
Q ss_pred HHHHHHHHhcCCCcEEEEee
Q 024008 229 VSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 229 ~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.+++...+++ -|+.+.+..
T Consensus 262 se~lv~~LaR-~F~~Vr~vK 280 (320)
T 2hwk_A 262 SESIIGAIAR-QFKFSRVCK 280 (320)
T ss_dssp HHHHHHHHHT-TEEEEEEEC
T ss_pred HHHHHHHHHH-hcceeeeeC
Confidence 5667676766 487776665
No 392
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=92.12 E-value=0.35 Score=42.17 Aligned_cols=43 Identities=19% Similarity=0.063 Sum_probs=36.9
Q ss_pred CeEEEEcCCcchhHHHhhCCCC---e----EEEEeCChHHHHHHHHHhhc
Q 024008 110 GRALVPGCGTGYDVVAMASPER---Y----VVGLEISDIAIKKAEELSSS 152 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~---~----v~~iD~s~~~~~~a~~~~~~ 152 (274)
.+|+|+-||.|.....+.+.|. . |.++|+++.++..-+.+...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 5899999999999999988662 3 78899999999988888764
No 393
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.11 E-value=0.049 Score=45.99 Aligned_cols=90 Identities=12% Similarity=0.114 Sum_probs=59.7
Q ss_pred CCCCeEEEEc--CCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024008 107 LPKGRALVPG--CGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG--~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.| +|.|..+..+++ .|++|+++|.+++.++.+++.- . .. .+ |..+ ......
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g----~--~~-~~--~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAG----A--WQ-VI--NYREEDLVERLKEITGGKK 209 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHT----C--SE-EE--ETTTSCHHHHHHHHTTTCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC----C--CE-EE--ECCCccHHHHHHHHhCCCC
Confidence 3567999999 455666666655 7889999999998888887631 1 11 11 2211 111246
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+++.+.. . ..++...++|+++|.++....
T Consensus 210 ~D~vi~~~g-~--------~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 210 VRVVYDSVG-R--------DTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEEECSC-G--------GGHHHHHHTEEEEEEEEECCC
T ss_pred ceEEEECCc-h--------HHHHHHHHHhcCCCEEEEEec
Confidence 999986543 1 235778899999999887653
No 394
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.10 E-value=0.32 Score=42.71 Aligned_cols=43 Identities=16% Similarity=0.113 Sum_probs=34.1
Q ss_pred CCeEEEEcCCcchhHHHhhC----C---CCeEEEEeCChHHHHHHHHHhh
Q 024008 109 KGRALVPGCGTGYDVVAMAS----P---ERYVVGLEISDIAIKKAEELSS 151 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~----~---~~~v~~iD~s~~~~~~a~~~~~ 151 (274)
+..|+|+|+|+|.++..+++ . ..+++.||+|+...+.-++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 46999999999998876654 1 2389999999988777776654
No 395
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.92 E-value=4.4 Score=33.10 Aligned_cols=57 Identities=14% Similarity=0.005 Sum_probs=42.5
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
++++.+|=-|++.|. .+..|++.|++|+.+|.+++.++.+.+.+. .++.++.+|+.+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g-----~~~~~~~~Dv~~ 86 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG-----GGAVGIQADSAN 86 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTCEEEECCTTC
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-----CCeEEEEecCCC
Confidence 567888888887773 345666699999999999998877765542 346777888754
No 396
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.90 E-value=0.07 Score=45.15 Aligned_cols=90 Identities=21% Similarity=0.203 Sum_probs=60.1
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.|+ |.|..+..+++ .|++|+++|.+++.++.+++.- . + . .+ |..+ ......
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g----~-~-~-~~--d~~~~~~~~~i~~~~~~~~ 214 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLG----C-H-H-TI--NYSTQDFAEVVREITGGKG 214 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT----C-S-E-EE--ETTTSCHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC----C-C-E-EE--ECCCHHHHHHHHHHhCCCC
Confidence 45679999995 66777766665 7899999999998888886531 1 1 1 11 2211 111246
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+|+++.+..- ..++...++|+++|.++....
T Consensus 215 ~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 215 VDVVYDSIGK---------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEEEEECSCT---------TTHHHHHHTEEEEEEEEECCC
T ss_pred CeEEEECCcH---------HHHHHHHHhhccCCEEEEEec
Confidence 9999865331 235778899999999887653
No 397
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.71 E-value=3.1 Score=33.26 Aligned_cols=60 Identities=10% Similarity=-0.111 Sum_probs=44.0
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 67 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARN 67 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCC
Confidence 345788888887663 344555689999999999888777776665543 468888888864
No 398
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.71 E-value=0.83 Score=33.68 Aligned_cols=95 Identities=16% Similarity=0.214 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCc-chhH-HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---C--CCCCCeeEEE
Q 024008 107 LPKGRALVPGCGT-GYDV-VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---W--CPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~-~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~--~~~~~fD~v~ 179 (274)
.++.+|+=+|||. |... ..|...|..|+++|.+++.++.++. .. ...++.+|... . ..-..+|+|+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~----g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF----SGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC----CSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC----CCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 4567999998854 2222 2333478899999999875543321 11 24556666543 1 1124689888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
..-. .+.....+..+.+.+.+...++...
T Consensus 90 ~~~~-----~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 90 AFTN-----DDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp ECSS-----CHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEeC-----CcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 5422 2223334444555555555555544
No 399
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.63 E-value=2.5 Score=34.30 Aligned_cols=113 Identities=13% Similarity=-0.008 Sum_probs=70.5
Q ss_pred HHHhcCCCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC-hHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----
Q 024008 100 HLHQSGALPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS-DIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---- 171 (274)
Q Consensus 100 ~~~~~~~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---- 171 (274)
.++......++++|=.|++.|. .+..|++.|++|+.++.. .+..+...+.+...+ .++.++.+|+.+...
T Consensus 22 ~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~ 99 (271)
T 3v2g_A 22 SMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQA 99 (271)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHH
T ss_pred hhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHH
Confidence 3444345667889999987663 345566689999998754 455555555444433 468899999986211
Q ss_pred -------CCCeeEEEecccccc------cChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024008 172 -------TELFDLIFDYTFFCA------IEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 -------~~~fD~v~~~~~~~~------~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.++.|+++.+..+.. .+.+.+. .+++.+...++++|.++....
T Consensus 100 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 100 IRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 137899998754322 2333322 345666777778888776643
No 400
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.53 E-value=0.6 Score=39.91 Aligned_cols=90 Identities=17% Similarity=0.214 Sum_probs=59.9
Q ss_pred CCCeEEEEc--CCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc--ccCC---CCCCCCeeEE
Q 024008 108 PKGRALVPG--CGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA--DFFT---WCPTELFDLI 178 (274)
Q Consensus 108 ~~~~vLDiG--~G~G~~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~--d~~~---~~~~~~fD~v 178 (274)
++.+||=.| .|.|..+..+++ .+++|++++.+++.++.+++.- . + .++.. |+.+ ....+.+|+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lG----a-d--~vi~~~~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLG----A-H--HVIDHSKPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTT----C-S--EEECTTSCHHHHHHTTCSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcC----C-C--EEEeCCCCHHHHHHHhcCCCceEE
Confidence 456899988 345788888887 4789999999999888887632 1 1 11111 1111 1133579999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024008 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~ 212 (274)
+.... ....++.+.++|+++|.+++.
T Consensus 244 id~~g--------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 244 FSTTH--------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EECSC--------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EECCC--------chhhHHHHHHHhcCCCEEEEE
Confidence 84311 123567888999999999876
No 401
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.50 E-value=2.4 Score=34.76 Aligned_cols=105 Identities=12% Similarity=0.073 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChH-HHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDI-AIKKAEELSSSLPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~-~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------- 171 (274)
..++++|=.|++.|. .+..|++.|++|+.++.++. ..+...+.....+ .++.++.+|+.+...
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 456788988877653 23455568999999998765 3444444444443 468999999986211
Q ss_pred CCCeeEEEeccccc-------ccChhHH-----------HHHHHHHHhcccCCcEEEEEE
Q 024008 172 TELFDLIFDYTFFC-------AIEPEMR-----------AAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 ~~~fD~v~~~~~~~-------~~~~~~~-----------~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.++.|+++.+.... .++.+.+ -.+++.+...++.+|.++...
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 14789999874332 1233332 234566777778888776654
No 402
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.16 E-value=0.62 Score=39.87 Aligned_cols=93 Identities=23% Similarity=0.134 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-ccCC-CCCCCCeeEEEeccc
Q 024008 108 PKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-DFFT-WCPTELFDLIFDYTF 183 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~~~~~~fD~v~~~~~ 183 (274)
++.+||-+|+|. |..+..+++ .|++|++++.+++..+.+++.+.. + .++.. +... ....+.+|+|+....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa----~--~v~~~~~~~~~~~~~~~~D~vid~~g 260 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA----D--SFLVSRDQEQMQAAAGTLDGIIDTVS 260 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC----S--EEEETTCHHHHHHTTTCEEEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC----c--eEEeccCHHHHHHhhCCCCEEEECCC
Confidence 678999998753 455556655 788999999999887777643311 1 11111 1000 001247999996533
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
... .++...++|+++|.++....
T Consensus 261 ~~~--------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 261 AVH--------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp SCC--------CSHHHHHHEEEEEEEEECCC
T ss_pred cHH--------HHHHHHHHHhcCCEEEEEcc
Confidence 221 13456788999999887543
No 403
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.07 E-value=0.1 Score=44.41 Aligned_cols=90 Identities=17% Similarity=0.227 Sum_probs=58.7
Q ss_pred CCCeEEEEc-C-CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc--ccCC---CCCCCCeeEEE
Q 024008 108 PKGRALVPG-C-GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA--DFFT---WCPTELFDLIF 179 (274)
Q Consensus 108 ~~~~vLDiG-~-G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~--d~~~---~~~~~~fD~v~ 179 (274)
++.+||-.| + |.|..+..+++ .|++|++++.+++.++.+++.-. + .++.. |+.+ ......+|+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~vi~~~~~~~~~~~~~~~~g~Dvv~ 222 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA-----D--IVLNHKESLLNQFKTQGIELVDYVF 222 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC-----S--EEECTTSCHHHHHHHHTCCCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-----c--EEEECCccHHHHHHHhCCCCccEEE
Confidence 567999884 3 34666677766 78999999999999998887421 1 11111 1111 11235799998
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~ 212 (274)
.... ....+..+.++|+++|.++..
T Consensus 223 d~~g--------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 223 CTFN--------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ESSC--------HHHHHHHHHHHEEEEEEEEES
T ss_pred ECCC--------chHHHHHHHHHhccCCEEEEE
Confidence 5321 123567888999999998764
No 404
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.02 E-value=1.4 Score=35.41 Aligned_cols=105 Identities=17% Similarity=0.068 Sum_probs=65.4
Q ss_pred CCCCCeEEEEcCC-cchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC----------
Q 024008 106 ALPKGRALVPGCG-TGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---------- 170 (274)
Q Consensus 106 ~~~~~~vLDiG~G-~G~~~----~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------- 170 (274)
..++++||=.|++ +|..+ ..|++.|++|+.++.+....+.+++.....+ ++.++.+|+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHH
Confidence 3456789999975 23333 4555589999999988655555555444432 4788999998721
Q ss_pred -CCCCeeEEEecccccc-----------cChhHHH-----------HHHHHHHhcccCCcEEEEEE
Q 024008 171 -PTELFDLIFDYTFFCA-----------IEPEMRA-----------AWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 171 -~~~~fD~v~~~~~~~~-----------~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~ 213 (274)
..++.|+++.+..+.. .+.+... .+++.+...++++|.++...
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 1247899998754432 3333322 34455666677778776654
No 405
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.96 E-value=1.4 Score=35.24 Aligned_cols=76 Identities=16% Similarity=0.063 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 172 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+... .
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 446788888876652 345555689999999999988887777665543 568899999987211 1
Q ss_pred CCeeEEEecccc
Q 024008 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~fD~v~~~~~~ 184 (274)
++.|+++.+..+
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987644
No 406
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.94 E-value=6.3 Score=32.97 Aligned_cols=94 Identities=13% Similarity=0.106 Sum_probs=58.7
Q ss_pred CCCCCeEEEEcCCcc-hhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCe
Q 024008 106 ALPKGRALVPGCGTG-YDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G-~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~----~~~~~~f 175 (274)
..++.+||=.|+|.. ..+..+++ .|+ .++++|.+++.++.+++.-. ...+.. |..+ ......+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-------~~~i~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-------MQTFNSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHGGGCSS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-------eEEEeCCCCCHHHHHHhhcccCCc
Confidence 456689999998753 44455555 676 57899999999888876531 111211 1111 1123467
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
|+|+.... . ...++...++|++||.+++...
T Consensus 231 d~v~d~~G----~----~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 231 QLILETAG----V----PQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp EEEEECSC----S----HHHHHHHHHHCCTTCEEEECCC
T ss_pred cccccccc----c----cchhhhhhheecCCeEEEEEec
Confidence 88874321 0 2346778899999999887653
No 407
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.80 E-value=1.2 Score=37.91 Aligned_cols=92 Identities=11% Similarity=0.004 Sum_probs=59.9
Q ss_pred CCCC--CeEEEEcC--CcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--------CC
Q 024008 106 ALPK--GRALVPGC--GTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--------CP 171 (274)
Q Consensus 106 ~~~~--~~vLDiG~--G~G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------~~ 171 (274)
..++ .+||-.|+ |.|..+..+++ .|+ +|++++.+++.++.+++.+ +. + . .+ |..+. ..
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~-~-~-~~--d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GF-D-A-AI--NYKKDNVAEQLRESC 227 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CC-S-E-EE--ETTTSCHHHHHHHHC
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CC-c-e-EE--ecCchHHHHHHHHhc
Confidence 3456 89999997 55566666655 888 9999999988887776533 11 1 1 11 22110 01
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 ~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.+.+|+++.+.. ...+....++|+++|++++...
T Consensus 228 ~~~~d~vi~~~G---------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 228 PAGVDVYFDNVG---------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp TTCEEEEEESCC---------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCCEEEECCC---------HHHHHHHHHHhccCcEEEEECC
Confidence 126999985433 1346788899999999887653
No 408
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.66 E-value=6 Score=32.88 Aligned_cols=62 Identities=19% Similarity=0.091 Sum_probs=44.8
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..+++||=.|++.|. .+..|++.|++|++++.+++.++.+...+...+...++.++.+|+.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 345788988887663 23455558999999999998888777666544322368888999875
No 409
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.65 E-value=1.7 Score=34.44 Aligned_cols=90 Identities=10% Similarity=-0.043 Sum_probs=57.9
Q ss_pred CCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024008 109 KGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~ 179 (274)
..+|+=+|+| ..+..++ +.|. |+++|.+++.++.++ . .+.++.+|..+. ..-...|.|+
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKANVRGARAVI 76 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence 3689989885 4544443 3677 999999998776664 1 267899998762 1235688888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
+.. +++.....+....+.+.|+..++.....
T Consensus 77 ~~~-----~~d~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 77 VDL-----ESDSETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp ECC-----SCHHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred EcC-----CCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 532 2233344455666667887777765533
No 410
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.64 E-value=0.25 Score=41.57 Aligned_cols=91 Identities=12% Similarity=-0.020 Sum_probs=56.9
Q ss_pred eEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc--cCCCCCCCCeeEEEeccccc
Q 024008 111 RALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD--FFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 111 ~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~fD~v~~~~~~~ 185 (274)
+||-.|+ |.|..+..+++ .|+++++++.+++.++.+++.- ...-++....+ .......+.+|+|+....-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lG----a~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~- 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLG----AKEVLAREDVMAERIRPLDKQRWAAAVDPVGG- 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTT----CSEEEECC---------CCSCCEEEEEECSTT-
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC----CcEEEecCCcHHHHHHHhcCCcccEEEECCcH-
Confidence 8999997 66777777777 7889999999988888886532 11111111111 1111123479999854221
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
..+....++++++|.+++...
T Consensus 227 --------~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 227 --------RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp --------TTHHHHHHTEEEEEEEEECSC
T ss_pred --------HHHHHHHHhhccCCEEEEEee
Confidence 135678889999999887643
No 411
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=90.57 E-value=1.9 Score=36.29 Aligned_cols=90 Identities=10% Similarity=-0.045 Sum_probs=60.1
Q ss_pred CCeEEEEcCCcchhHHHhhC----CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024008 109 KGRALVPGCGTGYDVVAMAS----PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~----~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~ 179 (274)
.++|+=+|+ |..+..+++ .|. ++++|.+++.++ +++ . .+.++.+|..+. ..-+.+|.++
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~----~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----S----GANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----T----TCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----C----CcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 357888887 566665554 577 999999999887 543 1 378999998862 2235788888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~ 215 (274)
+.. +++......-...+.+.|...++.....
T Consensus 183 ~~~-----~~d~~n~~~~~~ar~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 183 VDL-----ESDSETIHCILGIRKIDESVRIIAEAER 213 (336)
T ss_dssp ECC-----SSHHHHHHHHHHHHTTCTTSEEEEECSS
T ss_pred EcC-----CccHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 532 2234444555666777887777765543
No 412
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.53 E-value=3 Score=33.75 Aligned_cols=106 Identities=20% Similarity=0.087 Sum_probs=67.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeC-ChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEI-SDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~-s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------- 171 (274)
..++++|=.|++.|. .+..|++.|++|+.++. +.+..+...+.+...+ .++.++.+|+.+...
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456788888877653 23455668999999876 4555555555554443 468899999987211
Q ss_pred CCCeeEEEecccccc------cChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024008 172 TELFDLIFDYTFFCA------IEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 ~~~fD~v~~~~~~~~------~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.++.|+++.+..... .+.+.+. .+.+.+...++++|.++....
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 146899998754432 2333322 344667777788888776654
No 413
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.40 E-value=2.7 Score=33.02 Aligned_cols=133 Identities=11% Similarity=-0.039 Sum_probs=73.5
Q ss_pred CCCCeEEEEcCCcchhHHH----hhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcce-EEEEcccCCC--CCCCCeeEEE
Q 024008 107 LPKGRALVPGCGTGYDVVA----MASPERYVVGLEISDIAIKKAEELSSSLPNAKFV-SFLKADFFTW--CPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~----l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v-~~~~~d~~~~--~~~~~fD~v~ 179 (274)
..+++||=.|+ +|..+.. |++.|++|++++-++........ .++ .++.+|+.+. ..-+..|+|+
T Consensus 19 l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 19 FQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVV 89 (236)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEE
T ss_pred cCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEE
Confidence 44678988885 4444444 44489999999998876554332 137 8899998631 1124689999
Q ss_pred ecccccccCh-h--------HHHHHHHHHHhcccCCcEEEE-EEccCCCCC----CCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 180 DYTFFCAIEP-E--------MRAAWAQKIKDFLKPDGELIT-LMFPISDHV----GGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 180 ~~~~~~~~~~-~--------~~~~~l~~l~~~L~~gG~l~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
.+........ . ....+++.+.+. . .+.++. ..++..... ....|..++...+++++..|+...-
T Consensus 90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~gi~~~~ 167 (236)
T 3e8x_A 90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKR-G-IKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTI 167 (236)
T ss_dssp ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHH-T-CCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHHSSSEEEE
T ss_pred ECCCCCCCCCccccchhhHHHHHHHHHHHHHc-C-CCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHHCCCCEEE
Confidence 7765432111 1 112233333221 2 244444 333322211 1112334677778888888988776
Q ss_pred Eeecc
Q 024008 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
+..-.
T Consensus 168 lrpg~ 172 (236)
T 3e8x_A 168 VRPGP 172 (236)
T ss_dssp EEECS
T ss_pred EeCCc
Confidence 66533
No 414
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.36 E-value=0.46 Score=40.53 Aligned_cols=93 Identities=20% Similarity=0.121 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-ccCC-CCCCCCeeEEEeccc
Q 024008 108 PKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-DFFT-WCPTELFDLIFDYTF 183 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~~~~~~fD~v~~~~~ 183 (274)
++.+||-+|+|. |..+..+++ .|++|++++.+++..+.+++.+ +. +. ++.. +... ....+.+|+|+..-.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga-~~--vi~~~~~~~~~~~~~g~D~vid~~g 253 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GA-DD--YVIGSDQAKMSELADSLDYVIDTVP 253 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CC-SC--EEETTCHHHHHHSTTTEEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CC-ce--eeccccHHHHHHhcCCCCEEEECCC
Confidence 678999998753 455566665 6889999999988777776332 21 11 1111 1000 001246999985432
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
-.. .++...++|+++|.++....
T Consensus 254 ~~~--------~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 254 VHH--------ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp SCC--------CSHHHHTTEEEEEEEEECSC
T ss_pred ChH--------HHHHHHHHhccCCEEEEeCC
Confidence 211 13567789999999887643
No 415
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=90.25 E-value=2.3 Score=34.24 Aligned_cols=73 Identities=23% Similarity=0.185 Sum_probs=49.0
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC------CCCCCeeE
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW------CPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~fD~ 177 (274)
+.++.+|=-|++.|. .+..|++.|++|+..|.+.. +.+.+.+...+ .++.++.+|+.+. ...++.|+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 567788888877774 34566669999999998743 22223333333 4688899998762 23467999
Q ss_pred EEeccc
Q 024008 178 IFDYTF 183 (274)
Q Consensus 178 v~~~~~ 183 (274)
++.+.-
T Consensus 83 LVNNAG 88 (247)
T 4hp8_A 83 LVNNAG 88 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998754
No 416
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.19 E-value=0.11 Score=44.21 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=58.7
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------~~~~~~fD 176 (274)
.++.+||-+|+ |.|..+..+++ .|++|+++ .+++.++.+++.- .+.+. +-.+ ......+|
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lG--------a~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLG--------ATPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHT--------SEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcC--------CCEec-cCCCHHHHHHHHhcCCCce
Confidence 35679999994 45777777776 78999999 8888888886642 11122 1111 11234799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+|+.... . ..+....++|+++|.+++..
T Consensus 219 ~vid~~g-----~----~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 219 LVYDTLG-----G----PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEESSC-----T----HHHHHHHHHEEEEEEEEESC
T ss_pred EEEECCC-----c----HHHHHHHHHHhcCCeEEEEc
Confidence 9985322 1 24677888999999988754
No 417
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.18 E-value=2.7 Score=33.36 Aligned_cols=75 Identities=21% Similarity=0.111 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------CCC
Q 024008 108 PKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------PTE 173 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~~~ 173 (274)
.++++|=.|++.|. .+..|++.|++|+.++.+++..+...+.....+ .++.++.+|+.+.. ..+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45678888876552 344555689999999999988877777665554 46899999998621 124
Q ss_pred CeeEEEecccc
Q 024008 174 LFDLIFDYTFF 184 (274)
Q Consensus 174 ~fD~v~~~~~~ 184 (274)
+.|+++.+..+
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987554
No 418
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.09 E-value=0.86 Score=38.50 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=60.0
Q ss_pred CCCCCeEEEEcCCcch-hHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----CCCCCCeeEE
Q 024008 106 ALPKGRALVPGCGTGY-DVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----WCPTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~-~~~~l~~--~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~fD~v 178 (274)
..++.+||=+|+|.+. .+..+++ .+.+|+++|.+++.++.+++.-.. .-++....|..+ ......+|.+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~----~~i~~~~~~~~~~v~~~t~g~g~d~~ 236 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITGGLGVQSA 236 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS----EEEEC-CCCHHHHHHHHTTSSCEEEE
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe----EEEeCCCCCHHHHhhhhcCCCCceEE
Confidence 4567899999998754 3444444 477999999999988888765421 112222222221 1223457777
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
+.... . ...+....++|+++|.+++...
T Consensus 237 ~~~~~----~----~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 237 IVCAV----A----RIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EECCS----C----HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEecc----C----cchhheeheeecCCceEEEEec
Confidence 64322 1 2356788899999999887653
No 419
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.86 E-value=1.8 Score=38.21 Aligned_cols=94 Identities=12% Similarity=0.054 Sum_probs=60.7
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC----------------
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF---------------- 167 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---------------- 167 (274)
.++.+||=+|+ |.|..+..+++ .|+++++++.+++.++.+++.-.. .-+.....|+.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~----~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE----AIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC----EEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc----EEEecCcCcccccccccccchHHHHHH
Confidence 45679999996 45677777777 889999999999999988764211 00111011110
Q ss_pred -C----CCCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 168 -T----WCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 168 -~----~~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+ ......+|+|+..-. . ..+....++|+++|.++++.
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G-----~----~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG-----R----ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC-----H----HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHhCCCCCcEEEEcCC-----c----hhHHHHHHHhhCCcEEEEEe
Confidence 0 112357999985321 1 34677888999999998754
No 420
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.84 E-value=2.5 Score=34.77 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCc--c--h-hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024008 107 LPKGRALVPGCGT--G--Y-DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~--G--~-~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++. | . .+..|++.|++|+.++.++...+.+.+..... .++.++.+|+.+...
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467888888753 3 2 34566668999999999876555554444333 246789999987211
Q ss_pred -CCCeeEEEeccccc----------ccChhHH-----------HHHHHHHHhcccCCcEEEEEEc
Q 024008 172 -TELFDLIFDYTFFC----------AIEPEMR-----------AAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 -~~~fD~v~~~~~~~----------~~~~~~~-----------~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.++.|+++.+..+. ..+.+.+ -.+++.+...++.+|.++....
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 14789999876543 1232332 2344566667777888776553
No 421
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=89.80 E-value=5.2 Score=31.97 Aligned_cols=59 Identities=14% Similarity=0.122 Sum_probs=43.4
Q ss_pred CCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 108 PKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
.++++|=.|++.|. .+..|++.|++|+.++.+++.++.+...+...+ .++.++.+|+.+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 66 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRN 66 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCC
Confidence 45678888876552 234555689999999999998888777765543 468888888875
No 422
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=89.75 E-value=2.4 Score=34.39 Aligned_cols=76 Identities=17% Similarity=0.039 Sum_probs=51.6
Q ss_pred CCCeEEEEcCCcchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024008 108 PKGRALVPGCGTGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~----~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 172 (274)
.++++|=.|++.| .+ ..|++.|++|++++.++..++...+.+...+...++.++.+|+.+... .
T Consensus 31 ~~k~vlVTGasgg-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGASGG-IGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 3567888876544 43 344458999999999988777666655544433468889999986211 1
Q ss_pred CCeeEEEecccc
Q 024008 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~fD~v~~~~~~ 184 (274)
+++|+|+.+...
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999987543
No 423
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.72 E-value=0.74 Score=39.35 Aligned_cols=90 Identities=19% Similarity=0.139 Sum_probs=56.5
Q ss_pred CCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCCh---HHHHHHHHHhhcCCCCcceEEEEc-ccCCCC--CCCCeeEEEe
Q 024008 109 KGRALVPGCGT-GYDVVAMAS-PERYVVGLEISD---IAIKKAEELSSSLPNAKFVSFLKA-DFFTWC--PTELFDLIFD 180 (274)
Q Consensus 109 ~~~vLDiG~G~-G~~~~~l~~-~~~~v~~iD~s~---~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~--~~~~fD~v~~ 180 (274)
+.+||-+|+|. |..+..+++ .|++|+++|.++ +..+.+++.- .+.+.. |+.+.. ....+|+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~g--------a~~v~~~~~~~~~~~~~~~~d~vid 252 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK--------TNYYNSSNGYDKLKDSVGKFDVIID 252 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHT--------CEEEECTTCSHHHHHHHCCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhC--------CceechHHHHHHHHHhCCCCCEEEE
Confidence 78999999832 444555555 688999999988 7777776542 111211 111100 0146999986
Q ss_pred cccccccChhHHHHHH-HHHHhcccCCcEEEEEEc
Q 024008 181 YTFFCAIEPEMRAAWA-QKIKDFLKPDGELITLMF 214 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l-~~l~~~L~~gG~l~~~~~ 214 (274)
..... ..+ +...++|+++|.++....
T Consensus 253 ~~g~~--------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 253 ATGAD--------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCCCC--------THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCCh--------HHHHHHHHHHHhcCCEEEEEec
Confidence 53321 134 778899999999887643
No 424
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.66 E-value=1.8 Score=34.86 Aligned_cols=76 Identities=14% Similarity=0.002 Sum_probs=53.8
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 172 (274)
..+++||=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+... .
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 446788888876552 234455589999999999988877776665543 468999999986211 1
Q ss_pred CCeeEEEecccc
Q 024008 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~fD~v~~~~~~ 184 (274)
++.|+++.+...
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987654
No 425
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.52 E-value=1.9 Score=36.08 Aligned_cols=88 Identities=17% Similarity=0.118 Sum_probs=55.5
Q ss_pred CeEEEEcCCc-c-hhHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024008 110 GRALVPGCGT-G-YDVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 110 ~~vLDiG~G~-G-~~~~~l~~~~~--~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~v~~~~~~ 184 (274)
.+|.=||+|. | .++..+++.|. +|+++|.+++.++.+++. +. +.-...|..+ . -...|+|+..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G~---~~~~~~~~~~~~--~~~aDvVila--- 101 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI---IDEGTTSIAKVE--DFSPDFVMLS--- 101 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS---CSEEESCTTGGG--GGCCSEEEEC---
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----CC---cchhcCCHHHHh--hccCCEEEEe---
Confidence 6899998764 2 23344555787 999999999888777643 21 1112233322 1 2357988854
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEE
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~gG~l~~ 211 (274)
+++.....++.++...+++|.+++-
T Consensus 102 --vp~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 102 --SPVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp --SCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred --CCHHHHHHHHHHHhhccCCCcEEEE
Confidence 3334456778888888988876543
No 426
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.37 E-value=1.8 Score=34.68 Aligned_cols=102 Identities=13% Similarity=-0.017 Sum_probs=63.0
Q ss_pred CCeEEEEcCCcchhH----HHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024008 109 KGRALVPGCGTGYDV----VAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~----~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 172 (274)
+++||=.|++ |..+ ..|++ .|++|++++.++.......+.+...+ .++.++.+|+.+... .
T Consensus 4 ~k~vlITGas-ggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4577766654 5444 34555 78999999999877766665554433 468899999986210 1
Q ss_pred CCeeEEEeccccccc-----C-hhHH-----------HHHHHHHHhcccCCcEEEEEE
Q 024008 173 ELFDLIFDYTFFCAI-----E-PEMR-----------AAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 173 ~~fD~v~~~~~~~~~-----~-~~~~-----------~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+++|+|+.+...... + .+.. ..+++.+.+.++++|.++...
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 378999977543211 1 1221 234455666666677776644
No 427
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.36 E-value=3.4 Score=29.34 Aligned_cols=106 Identities=11% Similarity=-0.004 Sum_probs=58.2
Q ss_pred CCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024008 109 KGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~ 179 (274)
..+|+=+|+ |..+..++ +.|.+|+++|.+++.++.++ .. ...++.+|..+. .....+|+|+
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY----ATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT----CSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh----CCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 457999997 55554443 37889999999887554332 11 135566776541 1124689988
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~ 243 (274)
....-. ......+....+.+.+. .++... +.....+.++..|...
T Consensus 76 ~~~~~~----~~~~~~~~~~~~~~~~~-~ii~~~--------------~~~~~~~~l~~~g~~~ 120 (144)
T 2hmt_A 76 VAIGAN----IQASTLTTLLLKELDIP-NIWVKA--------------QNYYHHKVLEKIGADR 120 (144)
T ss_dssp ECCCSC----HHHHHHHHHHHHHTTCS-EEEEEC--------------CSHHHHHHHHHHTCSE
T ss_pred ECCCCc----hHHHHHHHHHHHHcCCC-eEEEEe--------------CCHHHHHHHHHcCCCE
Confidence 643211 12222334444455665 555443 2223345666677653
No 428
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.32 E-value=7.3 Score=31.23 Aligned_cols=60 Identities=10% Similarity=0.035 Sum_probs=45.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 71 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITD 71 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCC
Confidence 446788988887763 345566689999999999988887777665544 468888888875
No 429
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=89.31 E-value=2.9 Score=34.36 Aligned_cols=105 Identities=17% Similarity=0.092 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC--hHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS--DIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s--~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+ ....+...+.....+ .++.++.+|+.+...
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 456788988876653 234555689999999886 344444444444443 468899999986210
Q ss_pred -CCCeeEEEecccccc-------cChhHHH-----------HHHHHHHhcccCCcEEEEEE
Q 024008 172 -TELFDLIFDYTFFCA-------IEPEMRA-----------AWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 -~~~fD~v~~~~~~~~-------~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~ 213 (274)
.++.|+++.+..... ++.+.+. .+++.+...++++|.|+...
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 147899998755422 2333322 34566777788888877654
No 430
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=89.26 E-value=5.8 Score=32.17 Aligned_cols=59 Identities=17% Similarity=0.077 Sum_probs=42.8
Q ss_pred CCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 108 PKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
.++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d 84 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTS 84 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCC
Confidence 35688888877653 234556689999999999988877777665543 468888888865
No 431
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=88.66 E-value=2.8 Score=33.57 Aligned_cols=76 Identities=17% Similarity=0.044 Sum_probs=51.5
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 172 (274)
..++++|=.|++.|. .+..|++.|++|++++.+++.++...+.+...+ .++.++.+|+.+... .
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 345778888875542 234455589999999999887766655544333 468889999986210 1
Q ss_pred -CCeeEEEecccc
Q 024008 173 -ELFDLIFDYTFF 184 (274)
Q Consensus 173 -~~fD~v~~~~~~ 184 (274)
++.|+++.+...
T Consensus 85 ~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 85 HGKLNILVNNAGI 97 (260)
T ss_dssp TTCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 578999987543
No 432
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=88.47 E-value=6.7 Score=31.65 Aligned_cols=58 Identities=9% Similarity=-0.056 Sum_probs=42.1
Q ss_pred CCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 109 KGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 109 ~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d 64 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTD 64 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCC
Confidence 4678888876653 234555689999999999988887777665543 467888888865
No 433
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=88.35 E-value=6.5 Score=31.47 Aligned_cols=103 Identities=22% Similarity=0.145 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCc-chhHH----HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------C
Q 024008 108 PKGRALVPGCGT-GYDVV----AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------P 171 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~----~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~ 171 (274)
.++++|=.|++. |..+. .|++.|++|+.++.++...+.+.+.....+ ...++.+|+.+.. .
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHHHH
Confidence 456788888752 44443 445589999999987621122222211111 2467888987621 1
Q ss_pred CCCeeEEEecccccc-----------cChhHHH-----------HHHHHHHhcccCCcEEEEEE
Q 024008 172 TELFDLIFDYTFFCA-----------IEPEMRA-----------AWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 ~~~fD~v~~~~~~~~-----------~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~ 213 (274)
.++.|+++.+..+.. .+.+... .+++.+...++++|.++...
T Consensus 85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 247899998765432 3333322 23345556665567776654
No 434
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=88.15 E-value=5.6 Score=31.77 Aligned_cols=73 Identities=15% Similarity=0.071 Sum_probs=51.3
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------CC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------PT 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~~ 172 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+++..+....... .++.++.+|+.+.. ..
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG-----PAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 346788888876552 344556689999999999887776655542 35889999998621 12
Q ss_pred CCeeEEEecccc
Q 024008 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~fD~v~~~~~~ 184 (274)
++.|+++.+...
T Consensus 81 g~id~lv~~Ag~ 92 (259)
T 4e6p_A 81 GGLDILVNNAAL 92 (259)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987554
No 435
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=88.13 E-value=2.7 Score=33.94 Aligned_cols=78 Identities=14% Similarity=0.045 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-------CCCCee
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-------PTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~fD 176 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+....+.++.+|+.+.. .-++.|
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 446788888876552 2345556899999999998877766655544322246788899987621 124789
Q ss_pred EEEecccc
Q 024008 177 LIFDYTFF 184 (274)
Q Consensus 177 ~v~~~~~~ 184 (274)
+++.+...
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99987543
No 436
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.11 E-value=0.95 Score=37.94 Aligned_cols=94 Identities=16% Similarity=0.086 Sum_probs=59.0
Q ss_pred CCC-eEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc--cCCCCCCCCeeEEEec
Q 024008 108 PKG-RALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD--FFTWCPTELFDLIFDY 181 (274)
Q Consensus 108 ~~~-~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~fD~v~~~ 181 (274)
++. +||-.|+ |.|..+..+++ .|+++++++.+++.++.+++.-. ..-++....+ .........+|+|+..
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa----~~v~~~~~~~~~~~~~~~~~~~d~vid~ 224 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGA----SEVISREDVYDGTLKALSKQQWQGAVDP 224 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTC----SEEEEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC----cEEEECCCchHHHHHHhhcCCccEEEEC
Confidence 343 8999996 56677777776 78899999998888888875321 1101110111 1111223469999854
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~ 214 (274)
.. . ..+....++++++|++++...
T Consensus 225 ~g-----~----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 225 VG-----G----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp CC-----T----HHHHHHHTTEEEEEEEEECCC
T ss_pred Cc-----H----HHHHHHHHhhcCCCEEEEEec
Confidence 22 1 246788899999999887643
No 437
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=88.02 E-value=5.4 Score=32.06 Aligned_cols=67 Identities=12% Similarity=0.131 Sum_probs=45.1
Q ss_pred CeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------CCCCe
Q 024008 110 GRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------PTELF 175 (274)
Q Consensus 110 ~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~~~~f 175 (274)
++||=-|++.|. .+..|++.|++|+.+|.+++..+...+. . .++.++.+|+.+.. .-++.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---R---PNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---C---TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---c---CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 467777877773 3456667999999999998766554332 1 45788888987621 11467
Q ss_pred eEEEecc
Q 024008 176 DLIFDYT 182 (274)
Q Consensus 176 D~v~~~~ 182 (274)
|+++.+.
T Consensus 77 DiLVNNA 83 (247)
T 3ged_A 77 DVLVNNA 83 (247)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 7777654
No 438
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=87.77 E-value=8.4 Score=30.86 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=43.3
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhc-CCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSS-LPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++.+.+.+.. .+ ..++.++.+|+.+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP-GARLFASVCDVLD 70 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCC
Confidence 456788888887663 2445566899999999999888777666543 22 1347888888865
No 439
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=87.59 E-value=5.4 Score=32.36 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=44.5
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
...++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d 92 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQ 92 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence 4567788988887653 344556689999999999887777666655443 468888888875
No 440
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=87.54 E-value=2.6 Score=32.70 Aligned_cols=127 Identities=9% Similarity=-0.001 Sum_probs=70.8
Q ss_pred eEEEEcCCcc--h-hHHHhh-CCCCeEEEEeCChH-HHHHHHHHhhcCCCCcceEEEEcccCCCC----CCCCeeEEEec
Q 024008 111 RALVPGCGTG--Y-DVVAMA-SPERYVVGLEISDI-AIKKAEELSSSLPNAKFVSFLKADFFTWC----PTELFDLIFDY 181 (274)
Q Consensus 111 ~vLDiG~G~G--~-~~~~l~-~~~~~v~~iD~s~~-~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~fD~v~~~ 181 (274)
+||=.|++.| . .+..|+ +.|++|++++.+++ .++.... .. .++.++.+|+.+.. .-..+|+|+.+
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~---~~---~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ 80 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII---DH---ERVTVIEGSFQNPGXLEQAVTNAEVVFVG 80 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH---TS---TTEEEEECCTTCHHHHHHHHTTCSEEEES
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc---CC---CceEEEECCCCCHHHHHHHHcCCCEEEEc
Confidence 4887874332 2 234555 58999999999876 4443321 11 46899999998621 11468999977
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEE-EEEccCCCCCCCC-----------CcccCHHHHHHHHhcCCCcEEEEee
Q 024008 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELI-TLMFPISDHVGGP-----------PYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~l~~~L~~gG~l~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
.....+ . ...+++.+.+. ..|.++ +..........+. .|..++....++++..|+...-+..
T Consensus 81 ag~~n~--~-~~~~~~~~~~~--~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrp 154 (221)
T 3r6d_A 81 AMESGS--D-MASIVKALSRX--NIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRL 154 (221)
T ss_dssp CCCCHH--H-HHHHHHHHHHT--TCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CCCCCh--h-HHHHHHHHHhc--CCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 654322 1 23333333321 124444 4433322211110 2334567788888888988766655
No 441
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.45 E-value=4.2 Score=32.94 Aligned_cols=86 Identities=17% Similarity=0.174 Sum_probs=52.8
Q ss_pred eEEEEcCCc-ch-hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccccC
Q 024008 111 RALVPGCGT-GY-DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIE 188 (274)
Q Consensus 111 ~vLDiG~G~-G~-~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~ 188 (274)
+|.=||||. |. ++..+.+.|.+|+++|.+++.++.+.+. +... . ...|..+. ...|+|+.. .+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~~--~-~~~~~~~~---~~~D~vi~a-----v~ 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER----QLVD--E-AGQDLSLL---QTAKIIFLC-----TP 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TSCS--E-EESCGGGG---TTCSEEEEC-----SC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC----CCCc--c-ccCCHHHh---CCCCEEEEE-----CC
Confidence 577788765 22 2234445788999999999887766432 2111 1 12333222 457988853 34
Q ss_pred hhHHHHHHHHHHhcccCCcEEEE
Q 024008 189 PEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 189 ~~~~~~~l~~l~~~L~~gG~l~~ 211 (274)
+.....++..+...++++..++-
T Consensus 67 ~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 67 IQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp HHHHHHHHHHHGGGSCTTCEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEEE
Confidence 44556778888888888776543
No 442
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=87.43 E-value=10 Score=30.75 Aligned_cols=60 Identities=22% Similarity=0.238 Sum_probs=43.6
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
.+++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d 88 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSD 88 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCC
Confidence 446788888877653 234555689999999999988887777665543 468888888865
No 443
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=87.36 E-value=5.3 Score=32.44 Aligned_cols=105 Identities=17% Similarity=0.110 Sum_probs=61.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHH-HHHHHHHhhcCCCCcceEEEEcccCCCCC-----------
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIA-IKKAEELSSSLPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~-~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------- 171 (274)
..++++|=.|++.|. .+..|++.|++|++++.++.. .+...+.+...+ .++.++.+|+.+...
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 345678877776552 233445589999999987643 343333333332 458889999876210
Q ss_pred CCCeeEEEecccccc------cChhHHH-----------HHHHHHHhcccCCcEEEEEE
Q 024008 172 TELFDLIFDYTFFCA------IEPEMRA-----------AWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 ~~~fD~v~~~~~~~~------~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~ 213 (274)
.++.|+++.+..... .+.+... .+++.+.+.++.+|.++...
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 146899998754332 2223322 23455666666678777654
No 444
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.27 E-value=10 Score=30.57 Aligned_cols=60 Identities=17% Similarity=0.183 Sum_probs=43.3
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeC-------------ChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEI-------------SDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~-------------s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+++|. +++.++...+.....+ .++.++.+|+.+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRD 88 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence 456788888887663 34556668999999997 6777777666665544 468888888875
No 445
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=87.01 E-value=3.5 Score=32.96 Aligned_cols=72 Identities=10% Similarity=-0.010 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------CC
Q 024008 108 PKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------TE 173 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~~ 173 (274)
.++++|=.|++.|. .+..|++.|++|+.++.+++..+...+.+ + .++.++.+|+.+... .+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---G--DAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---G--GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45678888876552 23445558999999999987666554433 1 458889999876211 13
Q ss_pred CeeEEEecccc
Q 024008 174 LFDLIFDYTFF 184 (274)
Q Consensus 174 ~fD~v~~~~~~ 184 (274)
+.|+++.+..+
T Consensus 79 ~iD~lv~nAg~ 89 (254)
T 1hdc_A 79 SVDGLVNNAGI 89 (254)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987543
No 446
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=86.88 E-value=11 Score=32.24 Aligned_cols=98 Identities=13% Similarity=0.008 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCc-ceEEEEcccCCCCCCCCeeEEEecccccc
Q 024008 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAK-FVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~-~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 186 (274)
.+.+||.++.+.|-++..++.. .++.+.-|--.....+.|+..+++.+ .+++... .+ .....||+|+....=
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~--~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~-~~~~~~~~v~~~lpk-- 110 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH--KPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TA-DYPQQPGVVLIKVPK-- 110 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG--CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TS-CCCSSCSEEEEECCS--
T ss_pred CCCCEEEECCCCCHHHHhhccC--CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--cc-ccccCCCEEEEEcCC--
Confidence 4468999999999999888754 33444435555556677777777643 3665433 22 234679998853221
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 187 IEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 187 ~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
........+..+...|++|+.+++..
T Consensus 111 -~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 111 -TLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp -CHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred -CHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 22456778899999999999987765
No 447
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=86.78 E-value=2.8 Score=36.71 Aligned_cols=93 Identities=13% Similarity=0.020 Sum_probs=59.5
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC----------------
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF---------------- 167 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---------------- 167 (274)
.++.+||-.|+ |.|..+..+++ .|+++++++.+++.++.+++.- ...-+.....|+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lG----a~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALG----CDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT----CCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC----CCEEEecccccccccccccccccchhhhH
Confidence 45679999996 45666777766 8899999999999888886532 1111111111210
Q ss_pred ------CCCCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 168 ------TWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 168 ------~~~~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
+.. ...+|+|+.... . ..+....++++++|.++...
T Consensus 295 ~~~~v~~~~-g~g~Dvvid~~G-----~----~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 295 LAKLVVEKA-GREPDIVFEHTG-----R----VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHH-SSCCSEEEECSC-----H----HHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHHh-CCCceEEEECCC-----c----hHHHHHHHHHhcCCEEEEEe
Confidence 011 346999985422 1 24577788999999988754
No 448
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.68 E-value=11 Score=30.12 Aligned_cols=61 Identities=18% Similarity=0.115 Sum_probs=44.5
Q ss_pred CCCCeEEEEcC-Ccch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGC-GTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~-G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|+ |.|. .+..|++.|++|+.++.+++.++...+.+...+ ..++.++.+|+.+
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTS 84 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCC
Confidence 44678888887 5543 345666799999999999988877777664432 2468889999875
No 449
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=86.06 E-value=0.46 Score=40.79 Aligned_cols=94 Identities=11% Similarity=0.034 Sum_probs=57.6
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---CCCCCCeeEEEe
Q 024008 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---WCPTELFDLIFD 180 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~fD~v~~ 180 (274)
.++.+||=+|+ |.|..+..+++ .|++|+++. +++.++.+++.- -..-++....|+.+ ....+.+|+|+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lG----a~~vi~~~~~~~~~~v~~~t~g~~d~v~d 237 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRG----AEEVFDYRAPNLAQTIRTYTKNNLRYALD 237 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTT----CSEEEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcC----CcEEEECCCchHHHHHHHHccCCccEEEE
Confidence 55679999998 37888888887 888999885 888888776542 11101111112111 011245999984
Q ss_pred cccccccChhHHHHHHHHHHhcc-cCCcEEEEEE
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFL-KPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L-~~gG~l~~~~ 213 (274)
.-. . ...+....++| +++|+++...
T Consensus 238 ~~g-----~---~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 238 CIT-----N---VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp SSC-----S---HHHHHHHHHHSCTTCEEEEESS
T ss_pred CCC-----c---hHHHHHHHHHhhcCCCEEEEEe
Confidence 321 1 13456777888 5999988754
No 450
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=85.91 E-value=12 Score=30.07 Aligned_cols=60 Identities=18% Similarity=0.221 Sum_probs=41.9
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeC-------------ChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEI-------------SDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~-------------s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.+|. +++.++...+.....+ .++.++.+|+.+
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~ 84 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRD 84 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCC
Confidence 456788888887663 34555668999999998 5666666655554443 468888888865
No 451
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=85.80 E-value=2.5 Score=36.06 Aligned_cols=67 Identities=19% Similarity=0.195 Sum_probs=42.0
Q ss_pred CCCCeEEEEcCC-cchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC----CCCCeeEEEec
Q 024008 107 LPKGRALVPGCG-TGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----PTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G-~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~fD~v~~~ 181 (274)
...++||=+||| .|......+.....|+..|.+.+.++.+++. +..+..|+.+.. .-..+|+|+..
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF---------ATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT---------SEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc---------CCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 345789999985 3333333334567999999999887766432 455667776511 11468999865
Q ss_pred c
Q 024008 182 T 182 (274)
Q Consensus 182 ~ 182 (274)
.
T Consensus 85 ~ 85 (365)
T 3abi_A 85 L 85 (365)
T ss_dssp C
T ss_pred c
Confidence 3
No 452
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=85.79 E-value=12 Score=30.98 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=41.0
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC------------hHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS------------DIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+++|.+ ++.++...+.....+ .++.++.+|+.+
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d 118 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG--RRIIARQADVRD 118 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCC
Confidence 445788888877663 344556689999999976 555655555444443 468888889865
No 453
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=85.79 E-value=2.6 Score=35.05 Aligned_cols=91 Identities=14% Similarity=0.118 Sum_probs=55.8
Q ss_pred CCCCCeEEEEc--CCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-C-CCCCCeeEEEe
Q 024008 106 ALPKGRALVPG--CGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-W-CPTELFDLIFD 180 (274)
Q Consensus 106 ~~~~~~vLDiG--~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~~~fD~v~~ 180 (274)
..++.+||=+| .|.|..+..+++ .|++|++++ +++..+.+++.- . + ..+..+-.+ . ..-..+|+|+.
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lG----a-~--~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALG----A-E--QCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHT----C-S--EEEETTTSCHHHHCCSCEEEEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcC----C-C--EEEeCCCcchhhhhccCCCEEEE
Confidence 34567999886 445777777777 788999997 555577666532 1 1 122111111 0 01146999984
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
.- ..+ .+....++|+++|.++...
T Consensus 222 ~~-----g~~----~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 222 LV-----GGD----VGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp SS-----CHH----HHHHHGGGEEEEEEEEECC
T ss_pred CC-----CcH----HHHHHHHhccCCCEEEEeC
Confidence 32 111 2377889999999988753
No 454
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.74 E-value=10 Score=28.97 Aligned_cols=92 Identities=15% Similarity=0.139 Sum_probs=52.4
Q ss_pred eEEEEcCCcchhHHHh----hCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--CCCeeEEEecccc
Q 024008 111 RALVPGCGTGYDVVAM----ASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--TELFDLIFDYTFF 184 (274)
Q Consensus 111 ~vLDiG~G~G~~~~~l----~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~~ 184 (274)
+||=.|+ +|..+..+ ++.|.+|++++-++....... .+++++.+|+.+... -..+|+|+.....
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5676664 45444444 448999999999886544321 358899999976321 1468999976544
Q ss_pred cccChhHHHHHHHHHHhcccCC--cEEEEE
Q 024008 185 CAIEPEMRAAWAQKIKDFLKPD--GELITL 212 (274)
Q Consensus 185 ~~~~~~~~~~~l~~l~~~L~~g--G~l~~~ 212 (274)
..-...........+.+.++.. +.+++.
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 3211111122334444445443 455543
No 455
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=85.68 E-value=13 Score=30.31 Aligned_cols=60 Identities=10% Similarity=0.199 Sum_probs=42.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC------------hHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS------------DIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+++|.+ ++.++...+.+...+ .++.++.+|+.+
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRD 100 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCC
Confidence 456788988887763 345566689999999987 566665555554443 468888888865
No 456
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=85.58 E-value=0.66 Score=39.79 Aligned_cols=92 Identities=16% Similarity=0.048 Sum_probs=55.9
Q ss_pred CCCCeEEEEc--CCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC-CCCCCCeeEEE
Q 024008 107 LPKGRALVPG--CGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT-WCPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG--~G~G~~~~~l~~-~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~-~~~~~~fD~v~ 179 (274)
.++.+||=.| .|.|..+..+++ .|++|++++ +++..+.+++. +. + ..+.. |+.+ ......+|+|+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~l----Ga-~--~v~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKL----GA-D--DVIDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----TC-S--EEEETTSSCHHHHHHTSCCBSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHc----CC-C--EEEECCchHHHHHHhhcCCCCEEE
Confidence 3567999998 356777777776 788999998 67767766543 21 1 11111 1111 11124699998
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
....-. ...+....++++++|.++...
T Consensus 254 d~~g~~-------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 254 DNVGGS-------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ESSCTT-------HHHHGGGGBCSSSCCEEEESC
T ss_pred ECCCCh-------hhhhHHHHHhhcCCcEEEEeC
Confidence 542211 123466778899999988754
No 457
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=85.56 E-value=4.4 Score=32.65 Aligned_cols=76 Identities=17% Similarity=0.073 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhc-CCCCcceEEEEcccCCCCC-----------
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSS-LPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~----------- 171 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++.+.+.+.. .+ .++.++.+|+.+...
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 456788888876653 2345556899999999998887776655543 22 468999999987321
Q ss_pred CCCeeEEEecccc
Q 024008 172 TELFDLIFDYTFF 184 (274)
Q Consensus 172 ~~~fD~v~~~~~~ 184 (274)
.++.|+++.+...
T Consensus 96 ~g~id~lv~nAg~ 108 (266)
T 4egf_A 96 FGGLDVLVNNAGI 108 (266)
T ss_dssp HTSCSEEEEECCC
T ss_pred cCCCCEEEECCCc
Confidence 1478999987543
No 458
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.55 E-value=4.6 Score=32.71 Aligned_cols=76 Identities=14% Similarity=0.087 Sum_probs=50.8
Q ss_pred CCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCC-CcceEEEEcccCCCCC-----------C
Q 024008 108 PKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPN-AKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~-----------~ 172 (274)
.++++|=.|++.|. .+..|++.|++|++++.+++.++...+.+...+. ..++.++.+|+.+... .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45678877765552 2344555899999999998877766655544321 1268899999986210 1
Q ss_pred CCeeEEEeccc
Q 024008 173 ELFDLIFDYTF 183 (274)
Q Consensus 173 ~~fD~v~~~~~ 183 (274)
++.|+++.+..
T Consensus 85 g~iD~lv~nAg 95 (280)
T 1xkq_A 85 GKIDVLVNNAG 95 (280)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36899998754
No 459
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=85.55 E-value=11 Score=29.51 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCCcchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-------CCCCCe
Q 024008 107 LPKGRALVPGCGTGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-------CPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~----~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------~~~~~f 175 (274)
..+++||=.|++. ..+ ..|++.|++|++++.++...+...+.. ..++++.+|+.+. ...+++
T Consensus 5 ~~~~~vlVTGasg-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 1cyd_A 5 FSGLRALVTGAGK-GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALGGIGPV 77 (244)
T ss_dssp CTTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCCcEEecCCCHHHHHHHHHHcCCC
Confidence 3456788887654 444 344458999999999887665544432 2366778898762 112468
Q ss_pred eEEEecccc
Q 024008 176 DLIFDYTFF 184 (274)
Q Consensus 176 D~v~~~~~~ 184 (274)
|+++.+...
T Consensus 78 d~vi~~Ag~ 86 (244)
T 1cyd_A 78 DLLVNNAAL 86 (244)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999987553
No 460
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=85.43 E-value=5.7 Score=32.22 Aligned_cols=60 Identities=17% Similarity=0.080 Sum_probs=42.8
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++..+...+.+...+ .++.++.+|+.+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 93 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSE 93 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCC
Confidence 456788888876653 234555689999999998877766666554443 468888888865
No 461
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.34 E-value=4.3 Score=33.52 Aligned_cols=113 Identities=9% Similarity=0.062 Sum_probs=65.0
Q ss_pred CeEEEEcCCcch--hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccccc
Q 024008 110 GRALVPGCGTGY--DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAI 187 (274)
Q Consensus 110 ~~vLDiG~G~G~--~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~ 187 (274)
.+|.=||+|.=. .+..|++.|.+|+++|.+++.++.+.+. + ......+..+.. ...|+|+..-.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g----~~~~~~~~~e~~--~~aDvvi~~vp---- 73 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE----G----ACGAAASAREFA--GVVDALVILVV---- 73 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----T----CSEEESSSTTTT--TTCSEEEECCS----
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc----C----CccccCCHHHHH--hcCCEEEEECC----
Confidence 578889876422 2334455889999999999888776543 2 111233443322 34688885322
Q ss_pred ChhHHHHHH---HHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024008 188 EPEMRAAWA---QKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 188 ~~~~~~~~l---~~l~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~~ 245 (274)
++.....++ +.+...+++|..++-.. .. ...+..++.+.+.+.|...+.
T Consensus 74 ~~~~~~~v~~~~~~l~~~l~~g~ivv~~s-t~--------~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 74 NAAQVRQVLFGEDGVAHLMKPGSAVMVSS-TI--------SSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp SHHHHHHHHC--CCCGGGSCTTCEEEECS-CC--------CHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHhChhhHHhhCCCCCEEEecC-CC--------CHHHHHHHHHHHHHcCCeEEe
Confidence 122344555 56667788877654322 11 112345666777777765544
No 462
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=85.33 E-value=13 Score=32.83 Aligned_cols=95 Identities=19% Similarity=0.195 Sum_probs=59.1
Q ss_pred CeEEEEcCCc-c-hhHHHhhCCCCeEEEEeCChHHHHHHHHHhhc-------------CCC-CcceEEEEcccCCCCCCC
Q 024008 110 GRALVPGCGT-G-YDVVAMASPERYVVGLEISDIAIKKAEELSSS-------------LPN-AKFVSFLKADFFTWCPTE 173 (274)
Q Consensus 110 ~~vLDiG~G~-G-~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~-------------~~~-~~~v~~~~~d~~~~~~~~ 173 (274)
.+|.-||+|. | ..+..++..|..|+++|.+++.++.++..... ... .....+ ..|.. . -.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~-~--~~ 113 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK-E--LS 113 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGG-G--GT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHH-H--HC
Confidence 5799999987 3 34456667899999999999988877653210 000 011222 44442 1 24
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEE
Q 024008 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 174 ~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~ 211 (274)
..|+|+..-. . +.+....++.++...++++.+++.
T Consensus 114 ~aDlVIeaVp-e--~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 114 TVDLVVEAVF-E--DMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp TCSEEEECCC-S--CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEcCC-C--CHHHHHHHHHHHHhhCCCCeEEEe
Confidence 5798885432 2 112346778888888988877664
No 463
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=85.29 E-value=3.6 Score=32.58 Aligned_cols=74 Identities=11% Similarity=0.052 Sum_probs=51.9
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-------CCCCCe
Q 024008 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-------CPTELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------~~~~~f 175 (274)
..++++||=.|++.|. .+..|++.|++|+.++.+++.++...+... .++.+..+|+.+. ...++.
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 3456788988876652 234555589999999999988777666553 3588899998761 122478
Q ss_pred eEEEecccc
Q 024008 176 DLIFDYTFF 184 (274)
Q Consensus 176 D~v~~~~~~ 184 (274)
|+++.+...
T Consensus 86 d~li~~Ag~ 94 (249)
T 3f9i_A 86 DILVCNAGI 94 (249)
T ss_dssp SEEEECCC-
T ss_pred CEEEECCCC
Confidence 999987654
No 464
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=85.16 E-value=11 Score=30.64 Aligned_cols=60 Identities=18% Similarity=0.094 Sum_probs=43.3
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 68 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG--GEAAALAGDVGD 68 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT--CCEEECCCCTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCC
Confidence 346778888877653 334556689999999999988877776665443 467888888765
No 465
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=85.12 E-value=6.8 Score=31.18 Aligned_cols=72 Identities=19% Similarity=0.125 Sum_probs=48.3
Q ss_pred CeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------CCCCe
Q 024008 110 GRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------PTELF 175 (274)
Q Consensus 110 ~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~~~~f 175 (274)
+++|=.|++.|. .+..|++.|++|++++.+++..+...+.+...+ .++.++.+|+.+.. ..+++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 467777765542 234455589999999999887766655554333 45888999998621 01478
Q ss_pred eEEEeccc
Q 024008 176 DLIFDYTF 183 (274)
Q Consensus 176 D~v~~~~~ 183 (274)
|+++.+..
T Consensus 81 d~lv~nAg 88 (256)
T 1geg_A 81 DVIVNNAG 88 (256)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998754
No 466
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=85.10 E-value=7.8 Score=31.29 Aligned_cols=61 Identities=13% Similarity=0.061 Sum_probs=43.8
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
...++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d 86 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTS 86 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCC
Confidence 3556788888876652 334555689999999999988877776665543 457888888765
No 467
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.01 E-value=3.4 Score=34.04 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCC-CcceEEEEcccCCCCC-----------
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPN-AKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~----------- 171 (274)
..++++|=.|++.|. .+..|++.|++|++++.+++.++...+.+...+. ..++.++.+|+.+...
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 445678877765542 2344555899999999998877766555543321 1268899999986211
Q ss_pred CCCeeEEEeccc
Q 024008 172 TELFDLIFDYTF 183 (274)
Q Consensus 172 ~~~fD~v~~~~~ 183 (274)
.++.|+++.+..
T Consensus 104 ~g~iD~lvnnAG 115 (297)
T 1xhl_A 104 FGKIDILVNNAG 115 (297)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 136899998754
No 468
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=84.91 E-value=10 Score=30.62 Aligned_cols=60 Identities=15% Similarity=0.073 Sum_probs=41.4
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|++++.+++..+.....+...+ .++.++.+|+.+
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d 88 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG--LEGRGAVLNVND 88 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT--CCCEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEEeCCC
Confidence 345678877766552 234555689999999999888777666654433 357778888764
No 469
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.36 E-value=3.6 Score=33.88 Aligned_cols=76 Identities=14% Similarity=0.054 Sum_probs=55.5
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 172 (274)
..+++||=.|++.|. .+..|++.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+... .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 456789988887663 334555689999999999988888777665543 468999999987211 1
Q ss_pred CCeeEEEecccc
Q 024008 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~fD~v~~~~~~ 184 (274)
++.|+++.+..+
T Consensus 107 g~id~lvnnAg~ 118 (301)
T 3tjr_A 107 GGVDVVFSNAGI 118 (301)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478999987554
No 470
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=84.20 E-value=4.6 Score=31.89 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=47.4
Q ss_pred CeEEEEcCCcchhH----HHhhCCCCeEEEEeCChHHHHHHHHHh-hcCCCCcceEEEEcccCCCCC-----------CC
Q 024008 110 GRALVPGCGTGYDV----VAMASPERYVVGLEISDIAIKKAEELS-SSLPNAKFVSFLKADFFTWCP-----------TE 173 (274)
Q Consensus 110 ~~vLDiG~G~G~~~----~~l~~~~~~v~~iD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~-----------~~ 173 (274)
+++|=.|++. ..+ ..|++.|++|++++.++..++...+.. ...+ .++.++.+|+.+... .+
T Consensus 3 k~vlItGasg-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 3 RVAIVTGASS-GNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA--DKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG--GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4677777654 444 344558999999999987776655544 2222 468999999986211 13
Q ss_pred CeeEEEeccc
Q 024008 174 LFDLIFDYTF 183 (274)
Q Consensus 174 ~fD~v~~~~~ 183 (274)
++|+++.+..
T Consensus 80 ~id~li~~Ag 89 (250)
T 2cfc_A 80 AIDVLVNNAG 89 (250)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998754
No 471
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.08 E-value=15 Score=29.38 Aligned_cols=61 Identities=18% Similarity=0.055 Sum_probs=43.3
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++.+.+.+...+ ..++.++.+|+.+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~ 71 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSD 71 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCC
Confidence 446778888876552 234555689999999999988877776665443 1368888888875
No 472
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.94 E-value=7.1 Score=33.19 Aligned_cols=97 Identities=10% Similarity=-0.014 Sum_probs=60.5
Q ss_pred CCeEEEEcCCcch--hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC------CCCcceEEEEcccCCCCCCCCeeEEEe
Q 024008 109 KGRALVPGCGTGY--DVVAMASPERYVVGLEISDIAIKKAEELSSSL------PNAKFVSFLKADFFTWCPTELFDLIFD 180 (274)
Q Consensus 109 ~~~vLDiG~G~G~--~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~------~~~~~v~~~~~d~~~~~~~~~fD~v~~ 180 (274)
..+|.=||+|.=. ++..|++.|..|+.+|.+++.++..++..... .+..++.+ ..|..+.. ...|+|+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea~--~~aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKASL--EGVTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHHH--TTCCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHHH--hcCCEEEE
Confidence 3589999987522 33455668889999999999888777653211 11112222 12222111 34688884
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
. ++......+++++...++++..++...
T Consensus 106 a-----Vp~~~~~~vl~~i~~~l~~~~ivvs~~ 133 (356)
T 3k96_A 106 V-----VPSFAFHEVITRMKPLIDAKTRIAWGT 133 (356)
T ss_dssp C-----CCHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred C-----CCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 3 344566788899999999887766543
No 473
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=83.84 E-value=15 Score=29.44 Aligned_cols=61 Identities=21% Similarity=0.080 Sum_probs=41.6
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeC-ChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEI-SDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~-s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
...++++|=.|++.|. .+..|++.|++|+.++. ++...+...+.....+ .++.++.+|+.+
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d 89 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG--GEAFAVKADVSQ 89 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC--CcEEEEECCCCC
Confidence 3456788888876552 23455568999999988 6666666655554443 468888888875
No 474
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=83.68 E-value=16 Score=29.39 Aligned_cols=60 Identities=20% Similarity=0.115 Sum_probs=40.9
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~ 81 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLS 81 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCC
Confidence 446788888876552 234455589999999999887766655544333 357788888764
No 475
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=83.66 E-value=15 Score=29.87 Aligned_cols=98 Identities=12% Similarity=0.047 Sum_probs=55.0
Q ss_pred CeEEEEcCCcchh--HHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCC---CCeeEEEeccc
Q 024008 110 GRALVPGCGTGYD--VVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPT---ELFDLIFDYTF 183 (274)
Q Consensus 110 ~~vLDiG~G~G~~--~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~---~~fD~v~~~~~ 183 (274)
++|.=||+|.=.. +..|++.|.+|+++|.+++.++..++.-..............+... .... ..+|+|+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~-- 81 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL-- 81 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC--
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE--
Confidence 4788899874322 2344557889999999998887766542100000000000000001 0111 268988853
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024008 184 FCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~l~~~L~~gG~l~~~ 212 (274)
+++.....+++.+...++++..++..
T Consensus 82 ---v~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 82 ---TKAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp ---SCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred ---eccccHHHHHHHHHHhcCCCCEEEEe
Confidence 33345577888888888888766654
No 476
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=83.56 E-value=13 Score=30.36 Aligned_cols=61 Identities=18% Similarity=0.066 Sum_probs=42.9
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+. .++.++.+|+.+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d 102 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSD 102 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCC
Confidence 456778888876553 3345556899999999998877777666654431 368888888865
No 477
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=83.48 E-value=16 Score=29.46 Aligned_cols=60 Identities=15% Similarity=0.233 Sum_probs=42.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC----------------hHHHHHHHHHhhcCCCCcceEEEEcccC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS----------------DIAIKKAEELSSSLPNAKFVSFLKADFF 167 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s----------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 167 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+ ++.++...+.....+ .++.++.+|+.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~ 86 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVDVR 86 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTT
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcCCC
Confidence 456788988887763 345566689999999987 666666655554443 46888888987
Q ss_pred C
Q 024008 168 T 168 (274)
Q Consensus 168 ~ 168 (274)
+
T Consensus 87 ~ 87 (286)
T 3uve_A 87 D 87 (286)
T ss_dssp C
T ss_pred C
Confidence 5
No 478
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=83.35 E-value=16 Score=29.38 Aligned_cols=62 Identities=15% Similarity=0.148 Sum_probs=44.5
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCC-CcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPN-AKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+++.++.+.+.+...+. ..++.++.+|+.+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~ 74 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC
Confidence 456788888876652 3445566899999999999888777766655432 1268888888865
No 479
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.16 E-value=3.8 Score=36.28 Aligned_cols=90 Identities=7% Similarity=0.006 Sum_probs=58.2
Q ss_pred CeEEEEcCCcchhHHHh----hCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEEe
Q 024008 110 GRALVPGCGTGYDVVAM----ASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIFD 180 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l----~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~fD~v~~ 180 (274)
++|+=+|||. .+..+ ...|..|+.+|.+++.++.+.+.+ .+..+.||..++ ..-+..|++++
T Consensus 4 M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 4 MKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 5788887764 44333 347889999999999998887765 377899999872 22357898885
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024008 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~ 213 (274)
. .+.+...-+...+.+.+-+.-..+...
T Consensus 75 ~-----t~~De~Nl~~~~~Ak~~~~~~~~iar~ 102 (461)
T 4g65_A 75 V-----TNTDETNMAACQVAFTLFNTPNRIARI 102 (461)
T ss_dssp C-----CSCHHHHHHHHHHHHHHHCCSSEEEEC
T ss_pred E-----cCChHHHHHHHHHHHHhcCCccceeEe
Confidence 2 122333444455556555554444433
No 480
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=83.10 E-value=16 Score=29.01 Aligned_cols=60 Identities=15% Similarity=0.143 Sum_probs=38.9
Q ss_pred CCCeEEEEcCCcch---hHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC
Q 024008 108 PKGRALVPGCGTGY---DVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF 167 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~---~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 167 (274)
.++++|=.|++.|. .+..|++ .|++|++++.+++.++...+.+.......++.++.+|+.
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~ 70 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG 70 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTT
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCC
Confidence 34577877776652 3445666 699999999998877766555432211135777777775
No 481
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=82.93 E-value=16 Score=28.87 Aligned_cols=59 Identities=17% Similarity=0.108 Sum_probs=41.0
Q ss_pred CCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 108 PKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
.++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~ 67 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG--AKVHVLELDVAD 67 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCC
Confidence 45678888876552 234455589999999999887776665554433 357888888865
No 482
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=82.91 E-value=3.9 Score=27.85 Aligned_cols=64 Identities=14% Similarity=-0.015 Sum_probs=42.8
Q ss_pred CCeEEEEcCCcchhHHHh----hCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC----CCCCeeEEE
Q 024008 109 KGRALVPGCGTGYDVVAM----ASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----PTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l----~~~~-~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~fD~v~ 179 (274)
..+|+=+|+ |..+..+ .+.| .+|+++|.+++.++... . ..+.+...|+.+.. .-..+|+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 357999998 5555444 3477 79999999998776655 1 23677788876511 113689888
Q ss_pred ecc
Q 024008 180 DYT 182 (274)
Q Consensus 180 ~~~ 182 (274)
...
T Consensus 75 ~~~ 77 (118)
T 3ic5_A 75 SAA 77 (118)
T ss_dssp ECS
T ss_pred ECC
Confidence 654
No 483
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=82.82 E-value=17 Score=29.23 Aligned_cols=60 Identities=17% Similarity=0.125 Sum_probs=41.0
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC------------hHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS------------DIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s------------~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+ .+.++.........+ .++.++.+|+.+
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 82 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCISAKVDVKD 82 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC--CeEEEEeCCCCC
Confidence 456788988887663 344555689999999986 555555554444433 468888888865
No 484
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=82.74 E-value=14 Score=29.74 Aligned_cols=103 Identities=12% Similarity=0.082 Sum_probs=59.0
Q ss_pred CCCeEEEEcCC-cchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------C
Q 024008 108 PKGRALVPGCG-TGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------P 171 (274)
Q Consensus 108 ~~~~vLDiG~G-~G~~~----~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~ 171 (274)
.++++|=.|++ +|..+ ..|++.|++|+.++.+++.-+.+.+.....+ ++.++.+|+.+.. .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45688888875 23333 4555689999999988752122222222121 3678889987621 1
Q ss_pred CCCeeEEEeccccc----------ccChhHHH-----------HHHHHHHhcccCCcEEEEEE
Q 024008 172 TELFDLIFDYTFFC----------AIEPEMRA-----------AWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 ~~~fD~v~~~~~~~----------~~~~~~~~-----------~~l~~l~~~L~~gG~l~~~~ 213 (274)
.++.|+++.+..+. ..+.+... .+++.+...++++|.++...
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 24789999875432 22333222 23345556666577777655
No 485
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=82.56 E-value=5.5 Score=32.49 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=51.0
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-------CCCCee
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-------PTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~fD 176 (274)
..++++|=.|++.|. .+..|++.|++|++++.++...+.+.+.. ..++.++.+|+.+.. .-++.|
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 456788888876552 23445558999999999988776665443 257899999998621 124789
Q ss_pred EEEecccc
Q 024008 177 LIFDYTFF 184 (274)
Q Consensus 177 ~v~~~~~~ 184 (274)
+++.+..+
T Consensus 89 ~lv~nAg~ 96 (291)
T 3rd5_A 89 VLINNAGI 96 (291)
T ss_dssp EEEECCCC
T ss_pred EEEECCcC
Confidence 99987554
No 486
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=82.52 E-value=5.4 Score=32.53 Aligned_cols=96 Identities=16% Similarity=0.089 Sum_probs=56.9
Q ss_pred CeEEEEcCCcc--hhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC---------CCC--------cceEEEEcccCCCC
Q 024008 110 GRALVPGCGTG--YDVVAMASPERYVVGLEISDIAIKKAEELSSSL---------PNA--------KFVSFLKADFFTWC 170 (274)
Q Consensus 110 ~~vLDiG~G~G--~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~---------~~~--------~~v~~~~~d~~~~~ 170 (274)
.+|.=||+|.= ..+..++..|.+|+++|.+++.++.+++..... +.. .++.+ ..|..+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~~ 83 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQAV 83 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHHh
Confidence 46788888752 223444558999999999999988887653110 000 11222 22322211
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEE
Q 024008 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 171 ~~~~fD~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~ 211 (274)
...|+|+..-. . +.+....++.++...++++.+++.
T Consensus 84 --~~aDlVi~av~-~--~~~~~~~v~~~l~~~~~~~~il~s 119 (283)
T 4e12_A 84 --KDADLVIEAVP-E--SLDLKRDIYTKLGELAPAKTIFAT 119 (283)
T ss_dssp --TTCSEEEECCC-S--CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --ccCCEEEEecc-C--cHHHHHHHHHHHHhhCCCCcEEEE
Confidence 35688885322 1 113556778889999988876653
No 487
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=82.49 E-value=9 Score=30.96 Aligned_cols=87 Identities=17% Similarity=0.136 Sum_probs=51.5
Q ss_pred eEEEEcCCc-ch-hHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC-CeeEEEeccccc
Q 024008 111 RALVPGCGT-GY-DVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE-LFDLIFDYTFFC 185 (274)
Q Consensus 111 ~vLDiG~G~-G~-~~~~l~~~~~--~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~fD~v~~~~~~~ 185 (274)
+|.=||+|. |. .+..+++.|. +|+++|.+++.++.+++. +... . ...|..+.. . ..|+|+..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~~~--~-~~~~~~~~~--~~~aDvVila---- 69 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIID--E-GTTSIAKVE--DFSPDFVMLS---- 69 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCS--E-EESCGGGGG--GTCCSEEEEC----
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CCcc--c-ccCCHHHHh--cCCCCEEEEc----
Confidence 577788764 22 2233444676 899999999887776532 2111 1 122332222 2 57888843
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEE
Q 024008 186 AIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 186 ~~~~~~~~~~l~~l~~~L~~gG~l~~ 211 (274)
.++.....++.++...++++..++.
T Consensus 70 -vp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 70 -SPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp -SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 3444556777888888888875553
No 488
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=82.37 E-value=19 Score=29.36 Aligned_cols=60 Identities=18% Similarity=0.064 Sum_probs=40.8
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|++++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d 94 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG--INAHGYVCDVTD 94 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEecCCC
Confidence 446788888876552 233455589999999999887766555554333 357788888764
No 489
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=82.35 E-value=3.6 Score=32.97 Aligned_cols=76 Identities=12% Similarity=-0.005 Sum_probs=54.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 172 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+++..+...+.+...+ .++.++.+|+.+... .
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 456788888877653 234555589999999999988877776665544 468999999987211 1
Q ss_pred CCeeEEEecccc
Q 024008 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~fD~v~~~~~~ 184 (274)
++.|+++.+...
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987544
No 490
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=82.26 E-value=9.3 Score=29.74 Aligned_cols=69 Identities=7% Similarity=0.008 Sum_probs=46.9
Q ss_pred eEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--------CCCCCeeEEE
Q 024008 111 RALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--------CPTELFDLIF 179 (274)
Q Consensus 111 ~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------~~~~~fD~v~ 179 (274)
+||=.|++.|. .+..|++.|++|+.++.+++.++.+.+.. ..++.++.+|+.+. .....+|+++
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence 46777776552 23445558999999999998877666554 24588899999862 1124469998
Q ss_pred ecccc
Q 024008 180 DYTFF 184 (274)
Q Consensus 180 ~~~~~ 184 (274)
.+...
T Consensus 78 ~~Ag~ 82 (230)
T 3guy_A 78 HSAGS 82 (230)
T ss_dssp ECCCC
T ss_pred EeCCc
Confidence 77543
No 491
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=82.20 E-value=11 Score=29.47 Aligned_cols=74 Identities=14% Similarity=-0.044 Sum_probs=50.0
Q ss_pred CCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhh-cCCCCcceEEEEcccCCCC-----CC------C
Q 024008 109 KGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSS-SLPNAKFVSFLKADFFTWC-----PT------E 173 (274)
Q Consensus 109 ~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~-----~~------~ 173 (274)
++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+. ..+ .++.++.+|+.+.. .. +
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 3567777776542 234555589999999999887776665543 222 46889999998721 11 3
Q ss_pred CeeEEEecccc
Q 024008 174 LFDLIFDYTFF 184 (274)
Q Consensus 174 ~fD~v~~~~~~ 184 (274)
+.|+++.+..+
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 78999987654
No 492
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.13 E-value=17 Score=28.75 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=42.9
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC-CCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLP-NAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+.... ...++.++.+|+.+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC
Confidence 345788888887653 234555689999999999988877766554321 11457888888875
No 493
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=82.06 E-value=14 Score=29.95 Aligned_cols=75 Identities=15% Similarity=0.057 Sum_probs=45.5
Q ss_pred CCCCeEEEEcCCc-chhHH----HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------
Q 024008 107 LPKGRALVPGCGT-GYDVV----AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----------- 170 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~----~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------- 170 (274)
..++++|=.|++. |..+. .|++.|++|++++.++..-+.+.+.....+ ++.++.+|+.+..
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG---SDLVVKCDVSLDEDIKNLKKFLEE 95 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 3457888888752 44443 445589999999988752222222222221 3678889987621
Q ss_pred CCCCeeEEEecccc
Q 024008 171 PTELFDLIFDYTFF 184 (274)
Q Consensus 171 ~~~~fD~v~~~~~~ 184 (274)
..++.|+++.+...
T Consensus 96 ~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 96 NWGSLDIIVHSIAY 109 (285)
T ss_dssp HTSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 01478999987643
No 494
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=81.91 E-value=18 Score=28.80 Aligned_cols=60 Identities=18% Similarity=0.125 Sum_probs=41.1
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEE-eCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGL-EISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~i-D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.+ +.+++..+.........+ .++.++.+|+.+
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 69 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTN 69 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCC
Confidence 456788988887663 344556689999988 667766666665555443 457788888764
No 495
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=81.90 E-value=19 Score=29.07 Aligned_cols=58 Identities=19% Similarity=0.218 Sum_probs=41.3
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
...++++|=.|++.|. .+..|++.|++|+.+|.+++.++...+... .++.++.+|+.+
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d 84 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG-----SKAFGVRVDVSS 84 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-----TTEEEEECCTTC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CceEEEEecCCC
Confidence 4556788888877653 334555689999999999887766555431 357888888865
No 496
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=81.86 E-value=4.1 Score=34.11 Aligned_cols=130 Identities=15% Similarity=0.073 Sum_probs=72.3
Q ss_pred CeEEEEcCCcchhHHHhh----CCCCeEEEEeCCh----HHHHHHHHHhhcCCCCcceEEEEcccCCC------CCCCCe
Q 024008 110 GRALVPGCGTGYDVVAMA----SPERYVVGLEISD----IAIKKAEELSSSLPNAKFVSFLKADFFTW------CPTELF 175 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~----~~~~~v~~iD~s~----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~~f 175 (274)
++||=.|+ +|..+..++ +.|.+|++++-++ .......... . .+++++.+|+.+. .....+
T Consensus 11 ~~IlVtGa-tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~-~----~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 11 GRVLIAGA-TGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE-D----KGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp CCEEEECT-TSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH-H----TTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CeEEEECC-CcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH-h----CCcEEEEeecCCHHHHHHHHhhCCC
Confidence 57888875 566655544 3788999998765 4333332222 1 3589999999762 111278
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCC-----CcccCHHHHHHHHhcCCCcEEEEee
Q 024008 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGP-----PYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~l~~~L~~gG~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Gf~~~~~~~ 248 (274)
|+|+.......+. ....+++.+.+. ..-.+++...++.......+ ++..++...++++++.|+...-+..
T Consensus 85 d~Vi~~a~~~n~~--~~~~l~~aa~~~-g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrp 159 (346)
T 3i6i_A 85 DIVVSTVGGESIL--DQIALVKAMKAV-GTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICC 159 (346)
T ss_dssp CEEEECCCGGGGG--GHHHHHHHHHHH-CCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEEC
T ss_pred CEEEECCchhhHH--HHHHHHHHHHHc-CCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 9999876654432 223444444332 10124554444332111111 2234567778888888877666553
No 497
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=81.65 E-value=18 Score=28.75 Aligned_cols=58 Identities=24% Similarity=0.138 Sum_probs=40.1
Q ss_pred CCeEEEEcCCcch---hHHHhhCCCCeEEEE-eCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024008 109 KGRALVPGCGTGY---DVVAMASPERYVVGL-EISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 109 ~~~vLDiG~G~G~---~~~~l~~~~~~v~~i-D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 168 (274)
++++|=.|++.|. .+..|++.|++|+.+ +.+++..+...+.+...+ .++.++.+|+.+
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 65 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG--VKVLVVKANVGQ 65 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCC
Confidence 4577777766552 234555589999886 788877777766665543 468888888875
No 498
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=80.95 E-value=20 Score=28.80 Aligned_cols=60 Identities=17% Similarity=0.018 Sum_probs=42.1
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhc-CCCCcceEEEEcccCC
Q 024008 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSS-LPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+.+....+...+.. .+ .++.++.+|+.+
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 88 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG--RRCLPLSMDVRA 88 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEcCCCC
Confidence 456788988887663 3455666899999999998776665554422 12 458888888865
No 499
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=80.95 E-value=8.3 Score=31.47 Aligned_cols=77 Identities=9% Similarity=0.016 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCcchh---HHHhhCCCC---eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024008 108 PKGRALVPGCGTGYD---VVAMASPER---YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~---~~~l~~~~~---~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------- 171 (274)
.++++|=.|++.|.- +..|++.|+ +|+.++.+.+.++.+.+.+.......++.++.+|+.+...
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 357889888766532 234444565 9999999998887776665442112468899999986221
Q ss_pred -CCCeeEEEecccc
Q 024008 172 -TELFDLIFDYTFF 184 (274)
Q Consensus 172 -~~~fD~v~~~~~~ 184 (274)
.++.|+++.+...
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 1479999987553
No 500
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=80.70 E-value=17 Score=29.33 Aligned_cols=72 Identities=11% Similarity=0.024 Sum_probs=49.6
Q ss_pred CeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------CCCCe
Q 024008 110 GRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------PTELF 175 (274)
Q Consensus 110 ~~vLDiG~G~G~---~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----------~~~~f 175 (274)
+++|=.|++.|. .+..|++.|++|++++.+++.++...+.+... .++.++.+|+.+.. ..++.
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 578878876552 23455568999999999988777666555332 35888999998621 11468
Q ss_pred eEEEecccc
Q 024008 176 DLIFDYTFF 184 (274)
Q Consensus 176 D~v~~~~~~ 184 (274)
|+++.+..+
T Consensus 99 D~lvnnAG~ 107 (272)
T 2nwq_A 99 RGLINNAGL 107 (272)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987543
Done!