BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024010
(274 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VK9|A Chain A, Crystal Structure Of Delta-Class Glutathione Transferase
From Silkmoth
pdb|3VK9|B Chain B, Crystal Structure Of Delta-Class Glutathione Transferase
From Silkmoth
pdb|3VK9|C Chain C, Crystal Structure Of Delta-Class Glutathione Transferase
From Silkmoth
pdb|3VK9|D Chain D, Crystal Structure Of Delta-Class Glutathione Transferase
From Silkmoth
Length = 216
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 173 RNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIKYLVGKYGDGS 221
+G +P+ L++ + P +VD G+S++ES II YLV KY GS
Sbjct: 36 HHGEQLKPEYLKLNPQHTVPTLVDD--GLSIWESRAIITYLVNKYAKGS 82
>pdb|1Z9H|A Chain A, Microsomal Prostaglandin E Synthase Type-2
pdb|1Z9H|B Chain B, Microsomal Prostaglandin E Synthase Type-2
pdb|1Z9H|C Chain C, Microsomal Prostaglandin E Synthase Type-2
pdb|1Z9H|D Chain D, Microsomal Prostaglandin E Synthase Type-2
pdb|2PBJ|A Chain A, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
pdb|2PBJ|B Chain B, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
pdb|2PBJ|C Chain C, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
pdb|2PBJ|D Chain D, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
Length = 290
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 141 IEIYEYESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKV 182
+ +Y+Y++CPFC KVR A LD L Y P R ++
Sbjct: 15 LTLYQYKTCPFCSKVR---AFLDFHALPYQVVEVNPVLRAEI 53
>pdb|3G7J|A Chain A, Crystal Structure Of A Genetically Modified Delta Class
Gst (adgstd4- 4) From Anopheles Dirus, Y119e, In Complex
With S-hexyl Glutathione
pdb|3G7J|B Chain B, Crystal Structure Of A Genetically Modified Delta Class
Gst (adgstd4- 4) From Anopheles Dirus, Y119e, In Complex
With S-hexyl Glutathione
Length = 219
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 152 CRKVREIVAVLDLDV-LYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNII 210
CR V+ A + +++ L G + +P+ L++ + P +VD + G ++ES I
Sbjct: 12 CRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKLNPQHCIPTLVDED-GFVLWESRAIQ 70
Query: 211 KYLVGKYG 218
YLV KYG
Sbjct: 71 IYLVEKYG 78
>pdb|3F6D|A Chain A, Crystal Structure Of A Genetically Modified Delta Class
Gst (Adgstd4- 4) From Anopheles Dirus, F123a, In Complex
With S-Hexyl Glutathione
pdb|3F6D|B Chain B, Crystal Structure Of A Genetically Modified Delta Class
Gst (Adgstd4- 4) From Anopheles Dirus, F123a, In Complex
With S-Hexyl Glutathione
Length = 219
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 152 CRKVREIVAVLDLDV-LYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNII 210
CR V+ A + +++ L G + +P+ L++ + P +VD + G ++ES I
Sbjct: 12 CRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKLNPQHCIPTLVDED-GFVLWESRAIQ 70
Query: 211 KYLVGKYG 218
YLV KYG
Sbjct: 71 IYLVEKYG 78
>pdb|1JLV|A Chain A, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|B Chain B, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|C Chain C, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|D Chain D, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|E Chain E, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|F Chain F, Anopheles Dirus Species B Glutathione S-transferases 1-3
Length = 209
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 152 CRKVREIVAVLDLDV-LYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNII 210
CR V+ A + +++ L G + +P+ L++ + P +VD G +++ES I
Sbjct: 12 CRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKINPQHCIPTLVD--NGFALWESRAIC 69
Query: 211 KYLVGKYG 218
YL KYG
Sbjct: 70 TYLAEKYG 77
>pdb|1JLW|A Chain A, Anopheles Dirus Species B Glutathione S-Transferases 1-4
pdb|1JLW|B Chain B, Anopheles Dirus Species B Glutathione S-Transferases 1-4
pdb|3F63|A Chain A, Crystal Structure Of A Delta Class Gst (Adgstd4-4) From
Anopheles Dirus, In Complex With S-Hexyl Glutathione
pdb|3F63|B Chain B, Crystal Structure Of A Delta Class Gst (Adgstd4-4) From
Anopheles Dirus, In Complex With S-Hexyl Glutathione
pdb|3G7I|A Chain A, Crystal Structure Of A Delta Class Gst (Adgstd4-4) From
Anopheles Dirus, With Glutathione Complexed In One
Subunit
pdb|3G7I|B Chain B, Crystal Structure Of A Delta Class Gst (Adgstd4-4) From
Anopheles Dirus, With Glutathione Complexed In One
Subunit
Length = 219
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 152 CRKVREIVAVLDLDV-LYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNII 210
CR V+ A + +++ L G + +P+ L++ + P +VD + G ++ES I
Sbjct: 12 CRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKLNPQHCIPTLVDED-GFVLWESRAIQ 70
Query: 211 KYLVGKYG 218
YLV KYG
Sbjct: 71 IYLVEKYG 78
>pdb|3EIN|A Chain A, Delta Class Gst
pdb|3MAK|A Chain A, Crystal Structure Of Glutathione Transferase Dmgstd1 From
Drosophila Melanogaster, In Complex With Glutathione
Length = 209
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 175 GPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIKYLVGKYG 218
G + +P+ L++ + P +VD G +++ES I YLV KYG
Sbjct: 37 GEHLKPEFLKINPQHTIPTLVD--NGFALWESRAIQVYLVEKYG 78
>pdb|1PN9|A Chain A, Crystal Structure Of An Insect Delta-class Glutathione S-
Transferase From A Ddt-resistant Strain Of The Malaria
Vector Anopheles Gambiae
pdb|1PN9|B Chain B, Crystal Structure Of An Insect Delta-class Glutathione S-
Transferase From A Ddt-resistant Strain Of The Malaria
Vector Anopheles Gambiae
Length = 209
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 152 CRKVREIVAVLDLDV-LYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNII 210
CR V+ A + +++ L G + +P+ L++ + P +VD G +++ES I
Sbjct: 12 CRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVD--NGFALWESRAIQ 69
Query: 211 KYLVGKYG 218
YL KYG
Sbjct: 70 IYLAEKYG 77
>pdb|1R5A|A Chain A, Glutathione S-Transferase
Length = 218
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 143 IYEYESCPFCRKV----REIVAVLDLDVLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPN 198
+Y + P CR V + I LDL VL G +P +++ + P M D
Sbjct: 5 LYYLPASPPCRSVLLLAKMIGVELDLKVLNI---MEGEQLKPDFVELNPQHCIPTMDDH- 60
Query: 199 TGVSMYESDNIIKYLVGKYG 218
G+ ++ES I+ YLV YG
Sbjct: 61 -GLVLWESRVILSYLVSAYG 79
>pdb|2IL3|A Chain A, Structures Of An Insect Epsilon-Class Glutathione S-
Transferase From The Malaria Vector Anopheles Gambiae:
Evidence For High Ddt-Detoxifying Activity
pdb|2IL3|B Chain B, Structures Of An Insect Epsilon-Class Glutathione S-
Transferase From The Malaria Vector Anopheles Gambiae:
Evidence For High Ddt-Detoxifying Activity
pdb|2IMI|A Chain A, Structures Of An Insect Epsilon-Class Glutathione S-
Transferase From The Malaria Vector Anopheles Gambiae:
Evidence For High Ddt-Detoxifying Activity
pdb|2IMI|B Chain B, Structures Of An Insect Epsilon-Class Glutathione S-
Transferase From The Malaria Vector Anopheles Gambiae:
Evidence For High Ddt-Detoxifying Activity
pdb|2IMK|A Chain A, Structures Of An Insect Epsilon-Class Glutathione S-
Transferase From The Malaria Vector Anopheles Gambiae:
Evidence For High Ddt-Detoxifying Activity
pdb|2IMK|B Chain B, Structures Of An Insect Epsilon-Class Glutathione S-
Transferase From The Malaria Vector Anopheles Gambiae:
Evidence For High Ddt-Detoxifying Activity
Length = 221
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 143 IYEYESCPFCRKVREIVAVLDLDVLYYPCPR-NGPNFRPKVLQMGGKKQFPYMVDPNTGV 201
+Y P CR V L L++ G + +P+ +++ + P + D T +
Sbjct: 6 LYTLHLSPPCRAVELTAKALGLELEQKTINLLTGDHLKPEFVKLNPQHTIPVLDDNGTII 65
Query: 202 SMYESDNIIKYLVGKYG 218
+ ES I+ YLV KYG
Sbjct: 66 T--ESHAIMIYLVTKYG 80
>pdb|3VR6|A Chain A, Crystal Structure Of Amp-pnp Bound Enterococcus Hirae
V1-atpase [bv1]
pdb|3VR6|B Chain B, Crystal Structure Of Amp-pnp Bound Enterococcus Hirae
V1-atpase [bv1]
pdb|3VR6|C Chain C, Crystal Structure Of Amp-pnp Bound Enterococcus Hirae
V1-atpase [bv1]
Length = 600
Score = 30.8 bits (68), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 156 REIVAVLDLD-VLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNII 210
+I D+D V+Y C G V +FP ++DPNTG S+ E +I
Sbjct: 250 HQIAKWSDVDLVVYVGCGERGNEMTDVV------NEFPELIDPNTGESLMERTVLI 299
>pdb|2KLX|A Chain A, Solution Structure Of Glutaredoxin From Bartonella
Henselae Str. Houston
Length = 89
Score = 30.4 bits (67), Expect = 1.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 134 GPRPEKPIEIYEYESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVLQMG-GKKQFP 192
GP K I +Y +CP+C++ R++ LD + Y + R +++Q G+ FP
Sbjct: 1 GPGSMKEIILYTRPNCPYCKRARDL---LDKKGVKYTDIDASTSLRQEMVQRANGRNTFP 57
>pdb|1G7O|A Chain A, Nmr Solution Structure Of Reduced E. Coli Glutaredoxin 2
Length = 215
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 141 IEIYEYESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTG 200
+++Y Y+ CP+C K R I + ++ V + + + M G+KQ P ++ +
Sbjct: 1 MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTR---MVGQKQVP-ILQKDDS 56
Query: 201 VSMYESDNIIKYL 213
M ES +I+ Y+
Sbjct: 57 RYMPESMDIVHYV 69
>pdb|3F6F|A Chain A, Crystal Structure Of Glutathione Transferase Dmgstd10 From
Drosophila Melanogaster
pdb|3GH6|A Chain A, Crystal Structure Of Glutathione Transferase Dmgstd10 From
Drosophila Melanogaster, In Complex With Glutathione
Length = 210
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 152 CRKVREIVAVL--DLDVLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNI 209
CR V L + D R F P+ L++ + P + D G +++ES I
Sbjct: 12 CRSVLMTAKALGVEFDKKTIINTRAREQFTPEYLKINPQHTIPTLHDH--GFALWESRAI 69
Query: 210 IKYLVGKYGDGSVPF 224
+ YLV KYG F
Sbjct: 70 MVYLVEKYGKDDKLF 84
>pdb|3VR2|A Chain A, Crystal Structure Of Nucleotide-free A3b3 Complex From
Enterococcus Hirae V-atpase [ea3b3]
pdb|3VR2|B Chain B, Crystal Structure Of Nucleotide-free A3b3 Complex From
Enterococcus Hirae V-atpase [ea3b3]
pdb|3VR2|C Chain C, Crystal Structure Of Nucleotide-free A3b3 Complex From
Enterococcus Hirae V-atpase [ea3b3]
pdb|3VR3|A Chain A, Crystal Structure Of Amp-pnp Bound A3b3 Complex From
Enterococcus Hirae V-atpase [ba3b3]
pdb|3VR3|B Chain B, Crystal Structure Of Amp-pnp Bound A3b3 Complex From
Enterococcus Hirae V-atpase [ba3b3]
pdb|3VR3|C Chain C, Crystal Structure Of Amp-pnp Bound A3b3 Complex From
Enterococcus Hirae V-atpase [ba3b3]
pdb|3VR4|A Chain A, Crystal Structure Of Enterococcus Hirae V1-atpase [ev1]
pdb|3VR4|B Chain B, Crystal Structure Of Enterococcus Hirae V1-atpase [ev1]
pdb|3VR4|C Chain C, Crystal Structure Of Enterococcus Hirae V1-atpase [ev1]
pdb|3VR5|A Chain A, Crystal Structure Of Nucleotide-free Enterococcus Hirae
V1-atpase [ev1(l)]
pdb|3VR5|B Chain B, Crystal Structure Of Nucleotide-free Enterococcus Hirae
V1-atpase [ev1(l)]
pdb|3VR5|C Chain C, Crystal Structure Of Nucleotide-free Enterococcus Hirae
V1-atpase [ev1(l)]
Length = 600
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 156 REIVAVLDLD-VLYYPCPRNGPNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNII 210
+I D+D V+Y C G V +FP ++DPNTG S+ E +I
Sbjct: 250 HQIAKWSDVDLVVYVGCGERGNEXTDVV------NEFPELIDPNTGESLXERTVLI 299
>pdb|1FOV|A Chain A, Glutaredoxin 3 From Escherichia Coli In The Fully Oxidized
Form
Length = 82
Score = 28.9 bits (63), Expect = 2.8, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 141 IEIYEYESCPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVLQMGGKKQFP 192
+EIY E+CP+C + + +++ + P N R ++++ G+ P
Sbjct: 3 VEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAK-REEMIKRSGRTTVP 53
>pdb|3GX0|A Chain A, Crystal Structure Of Gsh-Dependent Disulfide Bond
Oxidoreductase
Length = 215
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 175 GPNFRPKVLQMGGKKQFPYMVD--PNTG---VSMYESDNIIKYLVGKYG 218
G FRP+ L++ + P +VD P G +S++ES I+ YL K G
Sbjct: 36 GGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTG 84
>pdb|2E0P|A Chain A, The Crystal Structure Of Cel44a
pdb|2E4T|A Chain A, Crystal Structure Of Cel44a, Gh Family 44 Endoglucanase
From Clostridium Thermocellum
pdb|2EO7|A Chain A, Crystal Structure Of Cel44a, Gh Family 44 Endoglucanase
From Clostridium Thermocellum
Length = 519
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 176 PNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIKYLVGKYGDGSVP 223
P+ R K ++ +K P+ + P+T D + YLV KYG+ S P
Sbjct: 130 PSSRWKEVKF--EKGAPFSLTPDTEDDYVYMDEFVNYLVNKYGNASTP 175
>pdb|2EEX|A Chain A, Crystal Structure Of Cel44a, Gh Family 44 Endoglucanase
From Clostridium Thermocellum
pdb|2EJ1|A Chain A, Crystal Structure Of Cel44a, Gh Family 44 Endoglucanase
From Clostridium Thermocellum
pdb|2EQD|A Chain A, Crystal Structure Of Cel44a, Gh Family 44 Endoglucanase
From Clostridium Thermocellum
Length = 519
Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 176 PNFRPKVLQMGGKKQFPYMVDPNTGVSMYESDNIIKYLVGKYGDGSVP 223
P+ R K ++ +K P+ + P+T D + YLV KYG+ S P
Sbjct: 130 PSSRWKEVKF--EKGAPFSLTPDTEDDYVYMDEFVNYLVNKYGNASTP 175
>pdb|3QAG|A Chain A, Human Glutathione Transferase O2 With Glutathione -New
Crystal Form
pdb|3Q18|A Chain A, Human Glutathione Transferase O2
pdb|3Q18|B Chain B, Human Glutathione Transferase O2
pdb|3Q19|A Chain A, Human Glutathione Transferase O2
pdb|3Q19|B Chain B, Human Glutathione Transferase O2
Length = 239
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 134 GPRPEKPIEIYEYESCPFCRKVREIVAVLDL 164
GP PE I IY CP+ + R ++ D+
Sbjct: 17 GPVPEGLIRIYSMRFCPYSHRTRLVLKAKDI 47
>pdb|3IR4|A Chain A, 1.2 Angstrom Crystal Structure Of The Glutaredoxin 2
(Grxb) From Salmonella Typhimurium In Complex With
Glutathione
Length = 218
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 142 EIYEYESCPFCRKVREI 158
++Y Y+ CPFC K R I
Sbjct: 5 KLYIYDHCPFCVKARXI 21
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.141 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,946,483
Number of Sequences: 62578
Number of extensions: 311815
Number of successful extensions: 847
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 838
Number of HSP's gapped (non-prelim): 23
length of query: 274
length of database: 14,973,337
effective HSP length: 97
effective length of query: 177
effective length of database: 8,903,271
effective search space: 1575878967
effective search space used: 1575878967
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)