BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024011
(274 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 243 bits (620), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/253 (51%), Positives = 166/253 (65%), Gaps = 2/253 (0%)
Query: 10 GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTI 69
G P+V + + P + EVL++ EA +NR D QR+GSYPPPK ASP GLE SG I
Sbjct: 38 GGPDVXVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEI 97
Query: 70 LSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS 129
+ VG VS + VGD+VC L GG YAE +PAGQ+LP P G AAA PE TVW+
Sbjct: 98 VGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWA 157
Query: 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 189
+F + L+ GES L+HGG+SGIGT AIQ+ + G V+ TAGS K C+ LGA I
Sbjct: 158 NLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGI 217
Query: 190 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE-LN 248
NY++EDF A +K ET G+GVD+ILD +GA+YF+RN+ SL DG L II GGA E +N
Sbjct: 218 NYRSEDFAAVIKAET-GQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEKVN 276
Query: 249 ITSLFAKRLTVQG 261
++ + KRLTV G
Sbjct: 277 LSPIXVKRLTVTG 289
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 158/262 (60%), Gaps = 4/262 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L ++EV P + EVL+KV A+ALNRAD +QR+G Y PP GAS
Sbjct: 23 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 82
Query: 61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG + +G WK+GD ALL GGG A+ V VP G ++P+P G++L AAA
Sbjct: 83 LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 142
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
PE T + + + ++ G+ L+H G SG+GT AIQ+ + G VTAGS++KL +
Sbjct: 143 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 202
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
+ LGA NYK EDF + T G GV++ILDC+G SY+++N+ L +DGR + G
Sbjct: 203 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 262
Query: 240 QGGAKTELNITSLFAKRLTVQG 261
GG LF+K L +G
Sbjct: 263 MGGGDIN---GPLFSKLLFKRG 281
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 158/262 (60%), Gaps = 4/262 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L ++EV P + EVL+KV A+ALNRAD +QR+G Y PP GAS
Sbjct: 7 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 66
Query: 61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG + +G WK+GD ALL GGG A+ V VP G ++P+P G++L AAA
Sbjct: 67 LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 126
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
PE T + + + ++ G+ L+H G SG+GT AIQ+ + G VTAGS++KL +
Sbjct: 127 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM 186
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
+ LGA NYK EDF + T G GV++ILDC+G SY+++N+ L +DGR + G
Sbjct: 187 AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGL 246
Query: 240 QGGAKTELNITSLFAKRLTVQG 261
GG LF+K L +G
Sbjct: 247 MGGGDIN---GPLFSKLLFKRG 265
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 139/288 (48%), Gaps = 27/288 (9%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+V+ G PEVL++ ++ P+ EV ++++A ALN D RKG P
Sbjct: 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG---GGG 93
G + SG + +VG V + GD+V +LG G
Sbjct: 61 LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120
Query: 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
YAE V +P + P P +S ++AAA P T W V + PG+ LV SG+
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS 180
Query: 154 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213
AIQ+ K G RV TAGSE+KL K LGAD +NY D+ V+ TGGKG D ++
Sbjct: 181 VAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVV 240
Query: 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
D GA YF+ + + GR+ I G G + L +F ++L++ G
Sbjct: 241 DHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILG 288
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 144/265 (54%), Gaps = 6/265 (2%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+A+ + + G PEVL+L+ ++ P KD +VLIKV A +N +T R G+Y K P
Sbjct: 30 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLP 88
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
Y PG + +G I +VG N S +K GD+V + GGYAE V +P + K
Sbjct: 89 YTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 148
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
AA T + + ++ + GES LVHG S G+G A Q+ + G+++ TAG+EE
Sbjct: 149 AAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ 208
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
+ GA N++ +++ ++K+ G KG+D+I++ + ++L L+ GR+ ++
Sbjct: 209 KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 268
Query: 238 GTQGGAKTELNITSLFAKRLTVQGI 262
G++G E+N AK ++ G+
Sbjct: 269 GSRG--TIEINPRDTMAKESSIIGV 291
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 130/267 (48%), Gaps = 8/267 (2%)
Query: 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL 63
I + G PEVLQ E ++E+ ++ +A +N DT R G YPPP S G
Sbjct: 5 IEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGL-GT 63
Query: 64 ECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
E +G + VG V K GD+V A G Y+ + A + +P+ +S + AAA
Sbjct: 64 EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL 123
Query: 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
TV+ + T + P E FL H + G+G A Q K G ++ T G+ +K
Sbjct: 124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG 242
GA INY+ ED V R+KE TGGK V V+ D +G ++R+L L G + G G
Sbjct: 184 AGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSG 243
Query: 243 AKTELNI------TSLFAKRLTVQGIV 263
A T +N+ SL+ R ++QG +
Sbjct: 244 AVTGVNLGILNQKGSLYVTRPSLQGYI 270
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 137/263 (52%), Gaps = 9/263 (3%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
K I+I + G +V++ ++ P I ++E+LIK + T +N ++ RKG YP K PY
Sbjct: 10 KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PYV 66
Query: 62 -GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVSLKDAAA 119
G E SGT+++ GK V+ ++VGDQV A + +A+ + + G V+ +P G S ++
Sbjct: 67 LGREASGTVVAKGKGVTNFEVGDQV-AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL 125
Query: 120 FPEVACTVWSTVFMTS---HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
+ V + + T+ H+ G+ L+ + G+G Q+ K +G A ++EK
Sbjct: 126 YAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEK 185
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
L + K+ GA+ IN ED + +V + T GKGVD D +G F+ +L +L G
Sbjct: 186 LKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVS 245
Query: 237 IGTQGGAKTELNITSLFAKRLTV 259
G G +IT L K +T+
Sbjct: 246 FGNASGLIPPFSITRLSPKNITL 268
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 135/270 (50%), Gaps = 24/270 (8%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ + G P L+L ++ +P+ ++ EV+++VEA LN AD L R G+Y
Sbjct: 1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG+E G + G + AL+ GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59 PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
P T + + PGE LV + +GT A+Q+ + G+RV A EKLA+
Sbjct: 108 PVSFLTAY-LALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP 166
Query: 181 KDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
LGA+ Y A V E G+D++L+ G + +LG L GRL IG
Sbjct: 167 LALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLAHGGRLVYIGA 219
Query: 240 QGGAKTELNITSLFAKRLTVQG--IVPLIS 267
G + L + L V G + PL+
Sbjct: 220 AEGEVAPIPPLRLMRRNLAVLGFWLTPLLR 249
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
K I + G PEVL+ + E V+++ +A LN DT R G YP P S
Sbjct: 3 KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGL- 61
Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
G E +G + +VG V+R+KVGD+V G G Y+E +P ++ + VS + AAA
Sbjct: 62 GAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAAL 121
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
TV + T + PGE L H + G+G+ A Q K G ++ T S EK A
Sbjct: 122 MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA 181
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
K LGA I+Y ED RV E T GK V+ D +G + +L S+ G + G
Sbjct: 182 KALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNA 241
Query: 241 GGAKTELNITSLFAK 255
G + +N+ L K
Sbjct: 242 SGPVSGVNLGILAQK 256
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 7 TQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECS 66
T+ +P L+L E P+ + +++++ A +LN D L + P + S
Sbjct: 33 TETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXS 92
Query: 67 GTILSVGKNVSRWKVGDQVCAL---------------------LGG---GGYAEKVAVPA 102
G + +VGK+V+R++ GD+V + LGG G +E V +P
Sbjct: 93 GVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPE 152
Query: 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC 162
G + P + +A+ P T W + HL G+ +V G + G+ F +Q+ K
Sbjct: 153 GWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKA 211
Query: 163 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 222
G V VT+ S EKL LGAD IN ED+V RV TG +G D IL+ G +
Sbjct: 212 TGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLG 271
Query: 223 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
++L ++ DGR+ +IG G + + L K VQGI
Sbjct: 272 QSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGI 311
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+V+ G L+L P+ +D E+ I+V+A LN D + R+G+ P
Sbjct: 4 MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLV 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG ECSG + ++G +V +++GD+V A + +AE V P V +P +S +AAAF
Sbjct: 64 PGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAF 123
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM-GKCQGVRVFVTAGSEEKLAV 179
P T + +F ++L G S LVH G+G Q+ V VF TA + + A+
Sbjct: 124 PMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAI 183
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
KD + + + D+V VK +GVD++LDC+ + L L G + G+
Sbjct: 184 -KD--SVTHLFDRNADYVQEVK-RISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGS 239
Query: 240 QGGAKTELNITSLFAK 255
E FAK
Sbjct: 240 SNMVTGETKSFFSFAK 255
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ + G P L+L ++ +P+ ++ EV+++VEA LN AD L R G+Y
Sbjct: 1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG+E G + G + AL+ GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59 PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
P T + + PGE LV + +GT A+Q+ + G+RV A EKLA+
Sbjct: 108 PVSFLTAY-LALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP 166
Query: 181 KDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
LGA+ Y A V E G+D++L+ G + +LG L GRL I
Sbjct: 167 LALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLAHGGRLVYI 217
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 120/266 (45%), Gaps = 12/266 (4%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYPPPKGASPYP 61
A VI + G P+ +EV+ +V ++ A +N DT R G +P G P
Sbjct: 4 AAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIV 63
Query: 62 -GLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDA-- 117
G E + + VG V+ + VG++VC L G Y+++ PA +++ VP + L D
Sbjct: 64 VGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHL 123
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
A T + T + PG+ L+H + G+G + + G V T +EEK
Sbjct: 124 AGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA 183
Query: 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237
+ LG INY T+DF V+E TGGKGVDV+ D +G Q++L L G
Sbjct: 184 ETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAY 243
Query: 238 GTQGGAKTELNIT-------SLFAKR 256
G G + + SLF R
Sbjct: 244 GHASGVADPIRVVEDLGVRGSLFITR 269
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 15/224 (6%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-YPPPKGASPY 60
KAI Q G P+VL+L + P+ + ++ LIKV A +LN D R GS + K +
Sbjct: 8 KAIQFDQFGPPKVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQVCALLGGGG----YAEKVAVPAGQVLPVPSGVS 113
P G + SG ++ +G +V+ +GD+V + G YAE V ++ +S
Sbjct: 68 PSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLS 127
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173
AA+ P T + + + G+ L+H G+ G+G AIQ+ K +G V TA S
Sbjct: 128 FLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-S 185
Query: 174 EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
+ A K LGA+ CINY EDF+ + VD ++D +G
Sbjct: 186 KRNHAFLKALGAEQCINYHEEDFLLAISTP-----VDAVIDLVG 224
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 131/269 (48%), Gaps = 24/269 (8%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + G P L+L ++ +P+ ++ EV+++VEA LN AD L R G+Y
Sbjct: 2 KAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLXRLGAY---------- 49
Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121
L G V G + AL+ GG AE+VAVP G +LP+P G+S ++AAAFP
Sbjct: 50 -LTRLHPPFIPGXEVVGVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFP 108
Query: 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181
T + + PGE LV + +GT A+Q+ + G+RV A EKLA+
Sbjct: 109 VSFLTAY-LALKRAQARPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLALPL 167
Query: 182 DLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
LGA+ Y A V E G+D++L+ G + +LG L GRL IG
Sbjct: 168 ALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLAHGGRLVYIGAA 220
Query: 241 GGAKTELNITSLFAKRLTVQG--IVPLIS 267
G + L + L V G + PL+
Sbjct: 221 EGEVAPIPPLRLXRRNLAVLGFWLTPLLR 249
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 128/263 (48%), Gaps = 4/263 (1%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAI PE L +VE P + V++ V+A + D L KG Y K P+
Sbjct: 22 MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL-KMEPPF 80
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
PG+E +G + S + S K GD+V A GGYAE+VAV +LP P + +A A
Sbjct: 81 VPGIETAGVVRSAPEG-SGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVA 139
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179
T++ L GE+ LV G + GIGT AIQ+ K G +V
Sbjct: 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF 199
Query: 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239
K +GAD+ + + E + V+E TGG GVD+++D +G F + +L +GRL ++G
Sbjct: 200 VKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGF 258
Query: 240 QGGAKTELNITSLFAKRLTVQGI 262
G + + L + ++ G+
Sbjct: 259 AAGGIPTIKVNRLLLRNASLIGV 281
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 8/237 (3%)
Query: 31 LIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90
L V T+LN D + G P + +C + G++ S G +V ++
Sbjct: 1563 LCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDAS----GRRVMGMVP 1618
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
G A V + VPS +L++AA+ P V T + ++ + + PGES L+H GS
Sbjct: 1619 AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSG 1678
Query: 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGG 206
G+G AI + +G RVF T GS EK A + L N + F V T G
Sbjct: 1679 GVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAG 1738
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
KGVD++L+ + Q ++ L GR IG + ++F K +T GI+
Sbjct: 1739 KGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGIL 1795
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 17/224 (7%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP- 61
A V+ + P V L+++ PQ +VL+++EA+ N D R G P P P
Sbjct: 10 AAVVEEANGPFV--LRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGE--APHAQQPLPA 65
Query: 62 --GLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
G + +GT+++VG V ++VGD V L GG G +A+ AV A + P+ ++
Sbjct: 66 ILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTX 125
Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174
+ A+ P V T W + + + G++ L+ GG G+G AIQ+ +G RVF TA
Sbjct: 126 RQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGS 185
Query: 175 EKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217
+ L +DLGA + + + ED+ A E T G+G D++ D +G
Sbjct: 186 D-LEYVRDLGATPIDASREPEDYAA---EHTAGQGFDLVYDTLG 225
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 17/275 (6%)
Query: 1 MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
M+ +V+T+ P E + L ++ P D ++L++ +N +D G Y P
Sbjct: 3 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 62
Query: 58 SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
G E G ++++G + S R+ VG Q A + G +AE VPA PVPS +
Sbjct: 63 PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 119
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
T + ++ LS G+ LV + G G FA+Q+ K V T S+EK
Sbjct: 120 YLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEK 179
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
A K LG D INYKTE +K+E +GVDV+ + +G + F + +L GRL +
Sbjct: 180 SAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVDALATKGRLIV 238
Query: 237 IGTQGGAKTELNIT---------SLFAKRLTVQGI 262
IG G +T ++ L K +VQG
Sbjct: 239 IGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGF 273
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 17/275 (6%)
Query: 1 MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
M+ +V+T+ P E + L ++ P D ++L++ +N +D G Y P
Sbjct: 32 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 91
Query: 58 SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
G E G ++++G + S R+ VG Q A + G +AE VPA PVPS +
Sbjct: 92 PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 148
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
T + ++ LS G+ LV + G G FA+Q+ K V T S+EK
Sbjct: 149 YLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEK 208
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
A K LG D INYKTE +K+E +GVDV+ + +G + F + +L GRL +
Sbjct: 209 SAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVDALATKGRLIV 267
Query: 237 IGTQGGAKTELNIT---------SLFAKRLTVQGI 262
IG G +T ++ L K +VQG
Sbjct: 268 IGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGF 302
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 17/275 (6%)
Query: 1 MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
M+ +V+T+ P E + L ++ P D ++L++ +N +D G Y P
Sbjct: 24 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 83
Query: 58 SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
G E G ++++G + S R+ VG Q A + G +AE VPA PVPS +
Sbjct: 84 PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 140
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176
T + ++ LS G+ LV + G G FA+Q+ K V T S+EK
Sbjct: 141 YLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEK 200
Query: 177 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236
A K LG D INYKTE +K+E +GVDV+ + +G + F + +L GRL +
Sbjct: 201 SAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVDALATKGRLIV 259
Query: 237 IGTQGGAKTELNIT---------SLFAKRLTVQGI 262
IG G +T ++ L K +VQG
Sbjct: 260 IGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGF 294
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 7 TQPGSPEVLQLQEVEDPQ----IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPG 62
T+PGS + L L V++P + D EV I + A +N D L G YP G + G
Sbjct: 216 TRPGSLDGLAL--VDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASL-G 269
Query: 63 LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
E +G ++ G V+ GD+V ++ + V +P+G S AA+ P
Sbjct: 270 SEGAGVVVETGPGVTGLAPGDRVMGMIPKA-FGPLAVADHRMVTRIPAGWSFARAASVPI 328
Query: 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
V T + + + L PGES LVH + G+G AIQ+ + G V+ TA ++ AV +
Sbjct: 329 VFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAV--E 386
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
L + + +T DF + TGG+GVDV+L+ + + +L L GR +G
Sbjct: 387 LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELG 442
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 117/266 (43%), Gaps = 33/266 (12%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ Q P L+++EVE P I EVL++++A + D G +P
Sbjct: 1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
PG E G + VG V+ KVGD+V C L G G
Sbjct: 59 PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
GYAE A V+ +P +S ++AA T + + +T PGE ++ G G+
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIY-GIGGL 176
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
G A+Q K G+ V +EKL + K+LGAD+ +N ED +KE+ GG V+
Sbjct: 177 GHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVV 236
Query: 213 LDCMGASYFQRNLGSLNIDGRLFIIG 238
+ FQ S+ G ++G
Sbjct: 237 -TAVSKPAFQSAYNSIRRGGACVLVG 261
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 116/266 (43%), Gaps = 33/266 (12%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ Q P L+++EVE P I EVL++++A + D G +P
Sbjct: 1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
PG E G + VG V+ KVGD+V C L G G
Sbjct: 59 PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
GYAE A V+ +P +S ++AA T + + +T PGE ++ G G
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIY-GIGGF 176
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
G A+Q K G+ V +EKL + K+LGAD+ +N ED +KE+ GG V+
Sbjct: 177 GHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVV 236
Query: 213 LDCMGASYFQRNLGSLNIDGRLFIIG 238
+ FQ S+ G ++G
Sbjct: 237 -TAVSKPAFQSAYNSIRRGGACVLVG 261
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 2 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
K I + G+P +VLQ++ +KD+EV +++ +N +D + G+Y
Sbjct: 6 KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNI 65
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG E G + +VG VSR +G +V L G G + E V A V+P+P + AA
Sbjct: 66 PGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQM 125
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180
T W T T +L + LV+ S IG Q+ + R+ + +
Sbjct: 126 YINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL 185
Query: 181 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240
LGA I+ T V E T G G D +D +G SL +G IG
Sbjct: 186 LRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLL 245
Query: 241 GGAK 244
G +
Sbjct: 246 SGIQ 249
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%)
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG 164
V+P+P ++ +AA F T W ++ LSPGE L+H + G+G A+ + K G
Sbjct: 4 VVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIG 63
Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 224
R++ TAGS+ K + LG + + ++ DF + E T G GVDV+L+ + QR
Sbjct: 64 ARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRG 123
Query: 225 LGSLNIDGRLFIIGTQ 240
+ L GR +G +
Sbjct: 124 VQILAPGGRFIELGKK 139
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 113/241 (46%), Gaps = 29/241 (12%)
Query: 3 AIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGS---------- 50
A VI + G EVL+ Q + P I +EV++KV A ++N D R G
Sbjct: 24 AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83
Query: 51 --YPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPA 102
+ KG +P G + SG ++ G +V +K GD+V A + G +E V V
Sbjct: 84 PLHVKIKGEE-FPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSG 142
Query: 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS----PGESFLVHGGSSGIGTFAIQ 158
+V P ++ AA+ P VA T WS + L+ G+ L+ G S G+GTFAIQ
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQ 202
Query: 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218
+ K V S++ + + LGAD I+YK+ ++K K D ILD +G
Sbjct: 203 VMKAWDAHV-TAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSL---KPFDFILDNVGG 258
Query: 219 S 219
S
Sbjct: 259 S 259
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 1 MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
+KAI QP + + ++ P+ K E+L+K+++ ++N DT QR A
Sbjct: 3 LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSK---A 59
Query: 58 SPYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSL 114
G + G + SVG V+ + GD V + G AE + V P +S
Sbjct: 60 PRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISA 119
Query: 115 KDAAAFPEVACTVWSTVF------MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF 168
+ A + P T + T+F + + G++ L+ G+ G+G+ A Q+ K G+RV
Sbjct: 120 EQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVI 179
Query: 169 VTAGSEEKLAVCKDLGADVCINYK 192
TA E + K +GAD+ +N+K
Sbjct: 180 TTASRNETIEWTKKMGADIVLNHK 203
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 109/249 (43%), Gaps = 38/249 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L+L+++ P+ K +VLIK+EA + +D R+G + +
Sbjct: 1 MRAMRLVEIGKP--LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 -------PGLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
G E +G I VG V + GD V C + L
Sbjct: 59 GVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90 G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
G G YAE V VP + L +S +AA T + V S L P ++ +V
Sbjct: 119 GINYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKAS-LDPSKTLVVI 177
Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
G G+GT AIQ+ K G + EE L K GAD IN ++D V+ ++ T
Sbjct: 178 GAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQ 237
Query: 206 GKGVDVILD 214
GKG D ++D
Sbjct: 238 GKGADAVID 246
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 30/276 (10%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
L+ +++ P+ K +E+LI V+ + + D G +P P G E +G ++ +G+
Sbjct: 18 LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGE 77
Query: 75 NVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVL 106
NV WK+GD + C L L G G + + A Q
Sbjct: 78 NVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAA 137
Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR 166
+P G L A TV+ +++L G + G + G+G+ A+Q K G R
Sbjct: 138 HIPQGTDLAQVAPILCAGITVYKA-LKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYR 196
Query: 167 VFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 225
V G E K + + +G +V I++ K +D V V + T G VI + + + +
Sbjct: 197 VLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEAST 256
Query: 226 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
+ +G ++G GAK ++ + K +++ G
Sbjct: 257 RYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVG 292
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ G+P L+++EV+ P +VL+K+EA+ + D +G +P
Sbjct: 7 MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFI 64
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------CA-----LLG---------------GG 92
PG E G + +VG V+R K GD+V C L G G
Sbjct: 65 PGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNG 124
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
GYAE V V +P V + A TV+ + T+ PG+ ++ G G+
Sbjct: 125 GYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTN-ARPGQ-WVAISGIGGL 182
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
G A+Q + G+ V + KL + + LGA + +N + ED V ++ + GG V+
Sbjct: 183 GHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAH-GVL 241
Query: 213 LDCMGASYFQRNLGSLNIDGRLFIIG 238
+ + S F + +G G + ++G
Sbjct: 242 VTAVSNSAFGQAIGMARRGGTIALVG 267
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ G P L + EV PQ ++ + ++A+ + D +G +P
Sbjct: 26 MKAAVVRAFGKP--LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFI 83
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
PG E G + +VG V K GD+V C LGG G
Sbjct: 84 PGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVNG 143
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
G+AE V V +P + + A TV+ + +T PG+ ++V G G+
Sbjct: 144 GFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVTD-TKPGD-WVVISGIGGL 201
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDV 211
G A+Q + G+ V + KL + + LGA V +N KT D A +++ET G V
Sbjct: 202 GHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTVNAKTVADPAAYIRKETDGGAQGV 261
Query: 212 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263
++ + F++ LG + G + + G G L+I ++ +TV+G +
Sbjct: 262 LVTAVSPKAFEQALGMVARGGTVSLNGLPPG-DFPLSIFNMVLNGVTVRGSI 312
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ G+P L + EV PQ +V +K+EA+ + D G +P
Sbjct: 3 MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------CA-----LLG---------------GG 92
PG E G + +VG VSR K GD+V C L G G
Sbjct: 61 PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNG 120
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152
GY E V V +P V + A TV+ + +T PG+ ++V G G+
Sbjct: 121 GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTD-TRPGQ-WVVISGIGGL 178
Query: 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
G A+Q + G+RV + KL + + LGA+V +N + D A +++E GG V+
Sbjct: 179 GHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAH-GVL 237
Query: 213 LDCMGASYFQRNLGSLNIDGRLFIIG 238
+ + F + +G + G + + G
Sbjct: 238 VTAVSPKAFSQAIGMVRRGGTIALNG 263
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 113/271 (41%), Gaps = 65/271 (23%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP----------------KGAS 58
L+L EV P++ DEVL+ V A+++N +T+ P P +
Sbjct: 50 LRLGEVPMPELAPDEVLVAVMASSINY-NTVWSAMFEPIPTFHFLKQNARQGGWATRHDQ 108
Query: 59 PYP--GLECSGTILSVGKNVSRWKVGDQVCA----------------LLGG--------- 91
PY G +CSG ++ G V RWK GD V +LG
Sbjct: 109 PYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFET 168
Query: 92 --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGESFLVHG 147
GG AE V A Q+LP P+ ++ ++AA P A T + + + + G+ L+ G
Sbjct: 169 NFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWG 228
Query: 148 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK----TEDF------- 196
S G+G++AIQ K G S +K A + LG D+ IN T+D
Sbjct: 229 ASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRV 288
Query: 197 ------VARVKEETGGKGVDVILDCMGASYF 221
+A++ E G+ D++ + G F
Sbjct: 289 VETGRKLAKLVVEKAGREPDIVFEHTGRVTF 319
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 63/270 (23%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADT-------------LQRKGSYPP--PKGASP 59
+ L EV P++ E L+ V A+++N L+R G P + P
Sbjct: 76 IHLDEVPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLP 135
Query: 60 YP--GLECSGTILSVGKNVSRWKVGDQVCAL---------------------------LG 90
Y G + +G +L G V+ W+ GD+V A
Sbjct: 136 YHIIGSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETN 195
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVHGG 148
GG AE V Q++P P ++ ++AAA V T + + + + G++ L+ G
Sbjct: 196 FGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGA 255
Query: 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-----YK------TED-- 195
S G+G++A Q G S +K +C+ +GA+ I+ YK T+D
Sbjct: 256 SGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYKFWKDEHTQDPK 315
Query: 196 ----FVARVKEETGGKGVDVILDCMGASYF 221
F R++E TGG+ +D++ + G F
Sbjct: 316 EWKRFGKRIRELTGGEDIDIVFEHPGRETF 345
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 63/270 (23%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADT-------------LQRKG--SYPPPKGASP 59
+ L +V P++ E L+ V A+++N L+R G S + P
Sbjct: 58 IHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLP 117
Query: 60 YP--GLECSGTILSVGKNVSRWKVGDQVCAL---------------------------LG 90
Y G + +G +L G V+ W+ GD+V A
Sbjct: 118 YHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETN 177
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVHGG 148
GG AE V + Q++P P +S ++AAA V T + + + + G++ L+ G
Sbjct: 178 FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGA 237
Query: 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN--------YKTED----- 195
S G+G++A Q G S +K +C+ +GA+ I+ +K E+
Sbjct: 238 SGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPK 297
Query: 196 ----FVARVKEETGGKGVDVILDCMGASYF 221
F R++E TGG+ +D++ + G F
Sbjct: 298 EWKRFGKRIRELTGGEDIDIVFEHPGRETF 327
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 40/249 (16%)
Query: 23 PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG 82
P + D+V ++VEA A+N +DT R G + P + G + +GT+++VG +V+ +VG
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDTSMR-GQFATPWA---FLGTDYAGTVVAVGSDVTHIQVG 87
Query: 83 DQV-------CALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACTVWSTVFMT 134
D+V C G + V G+V +P G+S + AAA P T + +
Sbjct: 88 DRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLL 147
Query: 135 SHLSPGES------------FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
P S LV+GGS+ T +QM + G + + S + K
Sbjct: 148 GLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATCSPHNFDLAKS 206
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF---IIGT 239
GA+ +Y+ + ++ T + LDC+ N++ F IG
Sbjct: 207 RGAEEVFDYRAPNLAQTIRTYT-KNNLRYALDCI-----------TNVESTTFCFAAIGR 254
Query: 240 QGGAKTELN 248
GG LN
Sbjct: 255 AGGHYVSLN 263
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 40/249 (16%)
Query: 23 PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG 82
P + D+V ++VEA A+N +DT R G + P + G + +GT+++VG +V+ +VG
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDTKMR-GQFATPWA---FLGTDYAGTVVAVGSDVTHIQVG 87
Query: 83 DQV-------CALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACTVWSTVFMT 134
D+V C G + V G+V +P G+S + AAA P T + +
Sbjct: 88 DRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLL 147
Query: 135 SHLSPGES------------FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182
P S LV+GGS+ T +QM + G + + S + K
Sbjct: 148 GLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATCSPHNFDLAKS 206
Query: 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF---IIGT 239
GA+ +Y+ + ++ T + LDC+ N++ F IG
Sbjct: 207 RGAEEVFDYRAPNLAQTIRTYT-KNNLRYALDCI-----------TNVESTTFCFAAIGR 254
Query: 240 QGGAKTELN 248
GG LN
Sbjct: 255 AGGHYVSLN 263
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 12/271 (4%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
++A+V G P +V++L+ +E ++ +V +K+ A +N +D +G+Y
Sbjct: 27 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 86
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAA 118
G E +++VG NV+ K GD V G G AV + + L VPS + L+ AA
Sbjct: 87 VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 146
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---E 175
CT + + L PG+S + + +SG+G IQ+ G+R +
Sbjct: 147 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ 206
Query: 176 KLA-VCKDLGADVCINYKTEDFVARVKEETGGKGV---DVILDCMGASYFQRNLGSLNID 231
KL+ K LGA+ I TE+ + R + + K + + L+C+G L L
Sbjct: 207 KLSDRLKSLGAEHVI---TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARG 263
Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G + G +++ L K L ++G
Sbjct: 264 GTMVTYGGMAKQPVVASVSLLIFKDLKLRGF 294
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 12/271 (4%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
++A+V G P +V++L+ +E ++ +V +K+ A +N +D +G+Y
Sbjct: 14 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 73
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAA 118
G E +++VG NV+ K GD V G G AV + + L VPS + L+ AA
Sbjct: 74 VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 133
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---E 175
CT + + L PG+S + + +SG+G IQ+ G+R +
Sbjct: 134 TLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ 193
Query: 176 KLA-VCKDLGADVCINYKTEDFVARVKEETGGKGV---DVILDCMGASYFQRNLGSLNID 231
KL+ K LGA+ I TE+ + R + + K + + L+C+G L L
Sbjct: 194 KLSDRLKSLGAEHVI---TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARG 250
Query: 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G + G +++ L K L ++G
Sbjct: 251 GTMVTYGGMAKQPVVASVSLLIFKDLKLRGF 281
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 120/281 (42%), Gaps = 45/281 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 -------PGLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
G E +G I VG V + GD V C + L
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90 G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
G G YAE V VP + + ++ +AA T + V S L P ++ LV
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
G G+GT A+Q+ K G + EE + K GAD IN +D +A ++ T
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 206 GKGVDVILDCMGASYFQRNLG----SLNIDGRLFIIGTQGG 242
KGVD ++D +Y ++ L +L G+ ++G G
Sbjct: 238 SKGVDAVIDL---NYSEKTLSVYPKALAKQGKYVMVGLFGA 275
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 120/281 (42%), Gaps = 45/281 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 -------PGLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
G E +G I VG V + GD V C + L
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90 G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
G G YAE V VP + + ++ +AA T + V S L P ++ LV
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
G G+GT A+Q+ K G + EE + K GAD IN +D +A ++ T
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 206 GKGVDVILDCMGASYFQRNLG----SLNIDGRLFIIGTQGG 242
KGVD ++D +Y ++ L +L G+ ++G G
Sbjct: 238 SKGVDAVIDL---NYSEKTLSVYPKALAKQGKYVMVGLFGA 275
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 1 MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MKA V+ +P+ L E E IK +E L+ +E + D G Y G
Sbjct: 1 MKAAVVRH--NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYGNKAGT-- 56
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY--- 94
G E G + +G +VS +VGD+V C + GY
Sbjct: 57 VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD 116
Query: 95 ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
AE+ V A + VP G+ +A++ T + + S + PG+ ++ G+ G
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIF-GAGG 174
Query: 152 IGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
+G AIQ K G +V +++KL + K +GADV IN + V +K+ TGG GV
Sbjct: 175 LGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDEIKKITGGLGVQ 234
Query: 211 VILDCMGASY-FQRNLGSLNIDGRLFII 237
+ C A F++ + SL G++ +
Sbjct: 235 SAIVCAVARIAFEQAVASLKPMGKMVAV 262
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 107/249 (42%), Gaps = 38/249 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 -------PGLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
G E +G I VG V + GD V C + L
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90 G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146
G G YAE V VP + + ++ +AA T + V S L P ++ LV
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 GGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205
G G+GT A+Q+ K G + EE + K GAD IN +D +A ++ T
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 206 GKGVDVILD 214
KGVD ++D
Sbjct: 238 SKGVDAVID 246
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 15/247 (6%)
Query: 27 DDEVLIKVEATALNRADT--LQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQ 84
+ ++L+K E +L+ A + SY PP G G +L V K+ ++ GD
Sbjct: 38 EGQILVKNEYLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVL-VSKHPG-FQAGDY 95
Query: 85 VCALLGGGGYAEKVAVPAGQVLPVPSGVSL-KDAAAFPEVACTVWSTVFMTSHLSPGESF 143
V LG Y + P G PS L + +A T + + GE+
Sbjct: 96 VNGALGVQDYF--IGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETV 153
Query: 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKE 202
++ G + +G+ A Q+ + +G RV AG EK + ++LG D I+YK ED A +K
Sbjct: 154 VISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKR 213
Query: 203 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG------TQGGAKTELNITSLFAKR 256
E KG+DV D +G L + R+ + G + + N SL R
Sbjct: 214 EC-PKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNR 272
Query: 257 LTVQGIV 263
++G+V
Sbjct: 273 ARMEGMV 279
>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2
pdb|1H0K|B Chain B, Enoyl Thioester Reductase 2
Length = 364
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G YP P K
Sbjct: 5 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKT 64
Query: 57 A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 65 TGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
PA + P+G+++ A T + + L+PG+ F+ +GG+S +G +A
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 184
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARVKE---ETGG 206
Q+GK + +E +A K+LGA I +++F +KE ++GG
Sbjct: 185 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGG 244
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
+ + L+C+G LN +G + G
Sbjct: 245 EA-KLALNCVGGKSSTGIARKLNNNGLMLTYG 275
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 1 MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MKA V+ +P+ L E E IK +E L+ +E + D G + G
Sbjct: 1 MKAAVVRH--NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGT-- 56
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY--- 94
G E G + +G +VS +VGD+V C + GY
Sbjct: 57 VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD 116
Query: 95 ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
AE+ V A + VP G+ +A++ T + + S + PG+ ++ G+ G
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIF-GAGG 174
Query: 152 IGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
+G AIQ K G +V +++KL + K +GADV IN + V +K+ TGG GV
Sbjct: 175 LGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQ 234
Query: 211 VILDCMGASY-FQRNLGSLNIDGRLFII 237
+ C A F++ + SL G++ +
Sbjct: 235 SAIVCAVARIAFEQAVASLKPMGKMVAV 262
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G YP P K
Sbjct: 27 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKT 86
Query: 57 A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 87 TGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 146
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
PA + P+G+++ A T + + L+PG+ F+ +GG+S +G +A
Sbjct: 147 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 206
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARVKE---ETGG 206
Q+GK + +E +A K+LGA I +++F +KE ++GG
Sbjct: 207 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGG 266
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
+ + L+C+G LN +G + G
Sbjct: 267 EA-KLALNCVGGKSSTGIARKLNNNGLMLTYG 297
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G YP P K
Sbjct: 27 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 86
Query: 57 A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 87 TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 146
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
PA + P+G+++ A T + + L+PG+ F+ +GG+S +G +A
Sbjct: 147 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 206
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARVKE---ETGG 206
Q+GK + +E +A K+LGA I + +F +KE ++GG
Sbjct: 207 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGG 266
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
+ + L+C+G LN +G + G
Sbjct: 267 EA-KLALNCVGGKSSTGIARKLNNNGLMLTYG 297
>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GU7|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
Length = 364
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G YP P K
Sbjct: 5 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 64
Query: 57 A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 65 TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
PA + P+G+++ A T + + L+PG+ F+ +GG+S +G +A
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 184
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARVKE---ETGG 206
Q+GK + +E +A K+LGA I + +F +KE ++GG
Sbjct: 185 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGG 244
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
+ + L+C+G LN +G + G
Sbjct: 245 EA-KLALNCVGGKSSTGIARKLNNNGLMLTYG 275
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 39/292 (13%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD-TLQRKGSYPPPKGASP-Y 60
AI T+PG +L EV+ P+ EVLIKV AT++ D + + + P
Sbjct: 6 AIXKTKPGYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQI 63
Query: 61 PGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG---GGG 93
G E +G ++ +G V +VGD VC + G G
Sbjct: 64 XGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGV 123
Query: 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
+AE VPA + P + + A E TV + +S G+S L+ G +G
Sbjct: 124 FAEYAVVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPIS-GKSVLITGAGP-LG 179
Query: 154 TFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
I + K G V V+ S+ + + K +GAD IN ED V V + T G GVDV
Sbjct: 180 LLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDGNGVDVF 239
Query: 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQGI 262
L+ GA ++ L ++ GR+ ++G G T + N +F K LT+ GI
Sbjct: 240 LEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF-KALTIYGI 290
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 39/292 (13%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD-TLQRKGSYPPPKGASP-Y 60
AI T+PG +L EV+ P+ EVLIKV AT++ D + + + P
Sbjct: 7 AIXKTKPGYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQI 64
Query: 61 PGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG---GGG 93
G E +G ++ +G V +VGD VC + G G
Sbjct: 65 XGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGV 124
Query: 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153
+AE VPA + P + + A E TV + +S G+S L+ G +G
Sbjct: 125 FAEYAVVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPIS-GKSVLITGAGP-LG 180
Query: 154 TFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212
I + K G V V+ S+ + + K +GAD IN ED V V + T G GVDV
Sbjct: 181 LLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDGNGVDVF 240
Query: 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQGI 262
L+ GA ++ L ++ GR+ ++G G T + N +F K LT+ GI
Sbjct: 241 LEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF-KALTIYGI 291
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 19 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS-PYPGLECSGTILSVGKNVS 77
E+ P ++L++V+A ++N D R+ + PP G G + +G + +VG +V+
Sbjct: 44 ELPKPAPAGHDILVEVKAVSVNPVDYKVRRST--PPDGTDWKVIGYDAAGIVSAVGPDVT 101
Query: 78 RWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
++ GD+V +++ G AE V V P + +AAA P + T W F
Sbjct: 102 LFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDR 161
Query: 135 SHLS---PGES--FLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVC 188
++ PG + L+ GG+ G+G+ A+Q+ + + + V TA E K LGA
Sbjct: 162 LDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHV 221
Query: 189 INY 191
I++
Sbjct: 222 IDH 224
>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
(Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
Length = 349
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 11/195 (5%)
Query: 29 EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKN-VSRWKVGDQVC- 86
+VLIKV ++N +D KG Y P+ G E GTI++ G ++ VG +V
Sbjct: 51 QVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAF 110
Query: 87 --ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF---PEVACTVWSTVFMTSHLSPGE 141
L G +AE A +P+ V +D AA P A + V +
Sbjct: 111 ATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAXIVNPLTAIAXFDIVKQEGE----K 166
Query: 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201
+F+ G+S + I + K +G R VT +E++A+ KD+GA +N K DF A ++
Sbjct: 167 AFVXTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLR 226
Query: 202 EETGGKGVDVILDCM 216
E + + LD +
Sbjct: 227 EVXKAEQPRIFLDAV 241
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 119/283 (42%), Gaps = 27/283 (9%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
+A+++ Q + +Q +E+ Q+ +V + V ++LN D L G + P
Sbjct: 2 QALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPXIP 61
Query: 62 GLECSGTI-------LSVGKNV--SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGV 112
G++ +GT+ G+ V + W VG+ GG AE+ V ++ +P+G+
Sbjct: 62 GIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHW-----GGLAERARVKGDWLVALPAGL 116
Query: 113 SLKDA-----AAFPEVACTVWSTVFMTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQGVR 166
S ++A A F C + + P + +V G S G+G+ A+ + G +
Sbjct: 117 SSRNAXIIGTAGFTAXLCV---XALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQ 173
Query: 167 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 226
V +G E K LGA+ ++ + E +R E+ G +D +G + L
Sbjct: 174 VAAVSGRESTHGYLKSLGANRILS-RDEFAESRPLEKQLWAGA---IDTVGDKVLAKVLA 229
Query: 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLISGP 269
N G + G GG + + + +QG+ + + P
Sbjct: 230 QXNYGGCVAACGLAGGFALPTTVXPFILRNVRLQGVDSVXTPP 272
>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|B Chain B, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|C Chain C, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
Length = 364
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 36/272 (13%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G P P K
Sbjct: 5 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAKT 64
Query: 57 A---SPYPGLECSGT----ILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 65 TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES-FLVHGGSSGIGTFA 156
PA + P+G+++ A T + + L+PG+ F+ +GG+S +G +A
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYA 184
Query: 157 IQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARVKE---ETGG 206
Q+GK + +E +A K+LGA I + +F +KE ++GG
Sbjct: 185 SQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGG 244
Query: 207 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
+ + L+C+G LN +G + G
Sbjct: 245 EA-KLALNCVGGKSSTGIARKLNNNGLMLTYG 275
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199
GE+ LV + +G+ Q+ K +G +V AGS+EK+A K +G D NYKT + +
Sbjct: 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEE 205
Query: 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
++ G D D +G + L + G++ I G
Sbjct: 206 ALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICG 244
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199
GE+ +V+ + +G+ Q+ K +G +V GS+EK+A + LG DV NYKT + +
Sbjct: 141 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTVESLEE 200
Query: 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
++ G D D +G + +G + GR+ I G
Sbjct: 201 TLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 239
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199
GE+ +V+ + +G+ Q+ K +G +V GS+EK+A + LG DV NYKT + +
Sbjct: 162 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTVESLEE 221
Query: 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
++ G D D +G + +G + GR+ I G
Sbjct: 222 TLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 260
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 118/274 (43%), Gaps = 19/274 (6%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GAS 58
+A V+ + + +Q + + + +VL++V +++N D L S P K
Sbjct: 4 FQAFVVNKTETEFTAGVQTISXDDLPEGDVLVRVHYSSVNYKDGL---ASIPDGKIVKTX 60
Query: 59 PY-PGLECSGTILSVGKNVSRWKVGDQVCA------LLGGGGYAEKVAVPAGQVLPVPSG 111
P+ PG++ +G ++S R++ GD+V A + GGY+E + ++P+P G
Sbjct: 61 PFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKG 118
Query: 112 VSLKDAAAFPEVACTVWSTVF-MTSH-LSPGES-FLVHGGSSGIGTFAIQMGKCQGVRVF 168
++LK+A A T ++ + H L+P LV G + G+G+ A+ +G V
Sbjct: 119 LTLKEAXAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSXLAKRGYTVE 178
Query: 169 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 228
+ G + + LGA + ED A + +D +G L
Sbjct: 179 ASTGKAAEHDYLRVLGAKEVL--AREDVXAERIRPLDKQRWAAAVDPVGGRTLATVLSRX 236
Query: 229 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
G + + G GGA+ + + +++ GI
Sbjct: 237 RYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI 270
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 120/284 (42%), Gaps = 27/284 (9%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
++A+++ Q + +Q +++ ++ + +V + V ++LN D L G +
Sbjct: 22 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI 81
Query: 61 PGLECSGTI-------LSVGKNV--SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG 111
PG++ +GT+ G+ V + W VG+ GG AE+ V ++ +P G
Sbjct: 82 PGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHW-----GGLAEQARVKGDWLVAMPQG 136
Query: 112 VSLKDA-----AAFPEVACTVWSTVFMTSHLSPGE-SFLVHGGSSGIGTFAIQMGKCQGV 165
+ + A A F + C + + + P + +V G S G+G+ A+ + G
Sbjct: 137 LDARKAMIIGTAGFTAMLCVM---ALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY 193
Query: 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 225
+V +G E K LGA + + E +R E+ G +D +G + L
Sbjct: 194 QVVAVSGRESTHEYLKSLGASRVLP-RDEFAESRPLEKQVWAGA---IDTVGDKVLAKVL 249
Query: 226 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLISGP 269
+N G + G GG + + + +QG+ +++ P
Sbjct: 250 AQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPP 293
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVA 198
GE+ V S +G Q+ K G V +AGS+EK+ + K G D NYK E +
Sbjct: 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLT 215
Query: 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE-----LNITSLF 253
+ G+D+ + +G L ++N+ GR+ + G E N++++
Sbjct: 216 AALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNII 275
Query: 254 AKRLTVQGIV 263
KR +QG V
Sbjct: 276 YKRNRIQGFV 285
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 105/248 (42%), Gaps = 38/248 (15%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY- 60
+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 2 RAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLG 59
Query: 61 ------PGLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG 90
G E +G I VG V + GD V C + LG
Sbjct: 60 VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 91 ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
G YAE V VP + ++ +AA T + V S L P ++ LV G
Sbjct: 120 INFDGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVVG 178
Query: 148 GSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
G+GT A+Q+ K G + EE + K GAD IN +D +A ++ T
Sbjct: 179 AGGGLGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES 238
Query: 207 KGVDVILD 214
KGVD ++D
Sbjct: 239 KGVDAVID 246
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 123/294 (41%), Gaps = 39/294 (13%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD-TLQRKGSYPPPKGASP 59
M+AI+ T+P +L EV+ P+ EVLIKV AT++ D + + + P
Sbjct: 5 MQAIMKTKPAYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62
Query: 60 -YPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG---G 91
G E +G ++ VG V +VGD VC + G
Sbjct: 63 QIMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMD 122
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151
G +A VPA P + + AA E TV G S L+ G+
Sbjct: 123 GVFAHYAIVPAKNAWKNPKDMP-PEYAALQEPLGNAVDTVLAGP--IAGRSTLI-TGAGP 178
Query: 152 IGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210
+G I + K G V V+ SE + + K +GAD +N ED V V + T G GV+
Sbjct: 179 LGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDPVKFVMDITDGAGVE 238
Query: 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQGI 262
V L+ GA ++ L ++ GR+ ++G T + N +F K L V GI
Sbjct: 239 VFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIF-KALEVHGI 291
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 119/293 (40%), Gaps = 56/293 (19%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+ T+ GS V+ ++ P E+L+KV A L +D P + A
Sbjct: 1 MKAVQYTEIGSEPVVV--DIPTPTPGPGEILLKVTAAGLCHSDIFVMD--MPAAQYAYGL 56
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
P G E GT+ +G+ V+ + VGD V CA
Sbjct: 57 PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116
Query: 88 --LLGGGGYAE-------KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138
L G AE + VP G + PV + L DA P A + + L
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPV-AAAPLTDAGLTPYHAIS-----RVLPLLG 170
Query: 139 PGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197
PG + +V G G+G IQ+ + RV +++LA+ +++GAD +
Sbjct: 171 PGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAAD 229
Query: 198 ARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNI 249
A ++E TGG+G + D +GA S + +DG + ++G GA ++
Sbjct: 230 A-IRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF 281
>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
pdb|3IUP|B Chain B, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
Length = 379
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 93/235 (39%), Gaps = 37/235 (15%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRAD-----------TLQRKGSYPPPKGASPYP-- 61
L L ++ P DEVLI++EA+ LN +D T + G+ P + P
Sbjct: 20 LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADXSTAKASGTAERPIVTARVPEG 79
Query: 62 ---------------GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL 106
G E +G ++ G + + + + A +GG Y++ +PA Q L
Sbjct: 80 AXRSXAGRLDASXPVGNEGAGVVVEAGSSPAAQALXGKTVAAIGGAXYSQYRCIPADQCL 139
Query: 107 PVPSGVSLKD-AAAF--PEVACTVWSTVFMTSHLSPGESFLVH-GGSSGIGTFAIQMGKC 162
+P G + D A++F P A T + H S LVH +S +G Q+
Sbjct: 140 VLPEGATPADGASSFVNPLTALGXVETXRLEGH-----SALVHTAAASNLGQXLNQICLK 194
Query: 163 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
G+++ +E+ + K GA N + F + E G + D G
Sbjct: 195 DGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFXQDLTEALVSTGATIAFDATG 249
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 56/257 (21%)
Query: 12 PEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL------- 63
PEV +++EV +P+I K E++IKV+A + +D + +G YPGL
Sbjct: 40 PEV-RVEEVPEPRIEKPTEIIIKVKACGICGSDVHXAQTD---EEGYILYPGLTGFPVTL 95
Query: 64 --ECSGTILSVG------KNVSRWKVGDQVCAL------------------------LG- 90
E SG ++ G + R+++G+ VCA LG
Sbjct: 96 GHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGF 155
Query: 91 --GGGYAEKVAVPAG------QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH-LSPGE 141
G +AE V V A ++ V G L A + E ++ V + + PG+
Sbjct: 156 NVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGD 215
Query: 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 200
+ ++ GG IG A+ + K G +V ++ SE + + K+LGAD I+ E+FV V
Sbjct: 216 NVVILGGGP-IGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAV 274
Query: 201 KEETGGKGVDVILDCMG 217
+ T G G + L+ G
Sbjct: 275 LDYTNGLGAKLFLEATG 291
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTED 195
++P SF V G+ +G A+ K G + + E +L + K LGA IN KT+D
Sbjct: 188 VTPASSF-VTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQD 246
Query: 196 FVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGT-QGGAKTELNITSLF 253
VA +KE T G GV+ L+ G+ ++ + +L I G++ ++G Q G + ++ L
Sbjct: 247 PVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLL 305
Query: 254 AKRLTVQGIV 263
T+ G+V
Sbjct: 306 LGGKTILGVV 315
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
+LQ ++ Q + DEVL+KV AT + D + R YP P A G E SG I ++G
Sbjct: 19 FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPA--VLGHEGSGIIEAIGP 76
Query: 75 NVSRWKVGDQV 85
NV+ +VGD V
Sbjct: 77 NVTELQVGDHV 87
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
+ ++ + + D VLIKV + +N D L K + G++ +GT++S
Sbjct: 19 VHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--S 76
Query: 75 NVSRWKVGDQVCAL---LG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
N R+ GD+V A LG GG +E +VP ++P+P +SLK+A + T
Sbjct: 77 NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXVYGTAGFTAA 136
Query: 129 STVFMTSH--LSPGE-SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185
+V LSP + S LV G + G+G A+ +G V + G+ E K LGA
Sbjct: 137 LSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXLNKRGYDVVASTGNREAADYLKQLGA 196
Query: 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT 245
I+ ED + + +D +G L + G + + G GG +
Sbjct: 197 SEVIS--REDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEV 254
Query: 246 ELNITSLFAKRLTVQGI 262
+ + +++ GI
Sbjct: 255 PATVYPFILRGVSLLGI 271
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVA 198
GE+ V S +G Q K G V +AGS+EK+ + K G D NYK E ++
Sbjct: 154 GETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLS 213
Query: 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE-----LNITSLF 253
+ G+D+ + +G L ++ + GR+ + G E N+ L
Sbjct: 214 AALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLI 273
Query: 254 AKRLTVQGIV 263
KR+ ++G +
Sbjct: 274 TKRIRMEGFL 283
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 104/251 (41%), Gaps = 45/251 (17%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT------LQRKGSYPPP 54
M+A+ P E L L + P+ E+L++VEA ++ D +G PP
Sbjct: 1 MRALAKLAP--EEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58
Query: 55 KGASPYPGLECSGTILSVGKNVSRWKVGDQV------------------------CALLG 90
G E SG + +VG V R +VGD V +LG
Sbjct: 59 L----VTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILG 114
Query: 91 ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHG 147
GG+AE V VPA P + + AA V TV+ S +S G+S L+ G
Sbjct: 115 VDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV-HTVYAGSGVS-GKSVLITG 172
Query: 148 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206
IG A + + G + V+ + +LA + AD +N ED + V+ T G
Sbjct: 173 AGP-IGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-G 229
Query: 207 KGVDVILDCMG 217
GV+V+L+ G
Sbjct: 230 SGVEVLLEFSG 240
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MK+I+I +P L + E E P EV +KV+ + +D+ +G P K Y
Sbjct: 21 MKSILIEKPNQ---LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAK----Y 73
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG--- 90
P G E G I +VG+ V +VG++V A+LG
Sbjct: 74 PRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHA 133
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGE--SFLVHG- 147
GG++E VPA +P V+ D A T+ + V T H P E + LV+G
Sbjct: 134 DGGFSEYAVVPAKNAWKIPEAVA--DQYAVMIEPFTIAANV--TGHGQPTENDTVLVYGA 189
Query: 148 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 190
G G+ + G V V +E+L K+ GAD IN
Sbjct: 190 GPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAIN 232
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 109/284 (38%), Gaps = 49/284 (17%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASPYP-GLECSGTILSV 72
L+L++ P+ K+DEVL+++ + +D G P G E SGT++ V
Sbjct: 16 LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75
Query: 73 GKNVSRWKVGDQV----------CALLGGGGY------------------AEKVAVPAGQ 104
GKNV K GD+V C G Y A A
Sbjct: 76 GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF 135
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG 164
+P VSL++ A ++ V + L G + LV G IG ++ K G
Sbjct: 136 CHKLPDNVSLEEGALLEPLSVGVHACRRAGVQL--GTTVLVIGAGP-IGLVSVLAAKAYG 192
Query: 165 VRVFVTAGSEEKLAVCKDLGADVCI-----NYKTEDFVARVKEETGGKGVDVILDCMGAS 219
V TA S +L V K+ GADV + + + R++ G +V +DC G
Sbjct: 193 AFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP-NVTIDCSGNE 251
Query: 220 -------YFQRNLGSLNIDG---RLFIIGTQGGAKTELNITSLF 253
R G+L + G ++ + E++I S+F
Sbjct: 252 KCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF 295
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINY 191
H+S G ++ +V G + G+ A Q+G G RV G++EK L + +LG D +NY
Sbjct: 151 HISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNY 210
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
KT + +++E G GVDV D +G + +N + + + G
Sbjct: 211 KTGNVAEQLREACPG-GVDVYFDNVGGDISNAVISQMNENSHIILCG 256
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 106/276 (38%), Gaps = 62/276 (22%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V + G P L ++E+E K EV IK+ ATA+ D G+ P+G P
Sbjct: 8 KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
G E +G + SVG+ V++ K GD V L +K+ V G+ L +
Sbjct: 64 LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 122
Query: 109 PSGVS-----------LKDAAAFPE-----------------------VAC---TVWSTV 131
P G S + F E + C T +
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190
T+ L PG V G G+G I K G R+ +++K A K+ GA CIN
Sbjct: 183 VNTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 241
Query: 191 YKTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 223
+DF ++E E GVD +C+G R
Sbjct: 242 --PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 275
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 106/276 (38%), Gaps = 62/276 (22%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V + G P L ++E+E K EV IK+ ATA+ D G+ P+G P
Sbjct: 9 KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 64
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
G E +G + SVG+ V++ K GD V L +K+ V G+ L +
Sbjct: 65 LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 123
Query: 109 PSGVS-----------LKDAAAFPE-----------------------VAC---TVWSTV 131
P G S + F E + C T +
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190
T+ L PG V G G+G I K G R+ +++K A K+ GA CIN
Sbjct: 184 VNTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242
Query: 191 YKTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 223
+DF ++E E GVD +C+G R
Sbjct: 243 --PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 276
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 106/276 (38%), Gaps = 62/276 (22%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V + G P L ++E+E K EV IK+ ATA+ D G+ P+G P
Sbjct: 9 KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 64
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
G E +G + SVG+ V++ K GD V L +K+ V G+ L +
Sbjct: 65 LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 123
Query: 109 PSGVS-----------LKDAAAFPE-----------------------VAC---TVWSTV 131
P G S + F E + C T +
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190
T+ L PG V G G+G I K G R+ +++K A K+ GA CIN
Sbjct: 184 VNTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242
Query: 191 YKTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 223
+DF ++E E GVD +C+G R
Sbjct: 243 --PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 276
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINY 191
H+S G ++ +V G + G+ A Q+G G RV G++EK L + +LG D +NY
Sbjct: 161 HISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNY 220
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
KT + +++E G GVDV D +G + N + + + G
Sbjct: 221 KTGNVAEQLREACPG-GVDVYFDNVGGDISNTVISQXNENSHIILCG 266
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 17 LQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV 76
L V+ P + D++L++ +A +N D K + P PG++ +G I+ VG V
Sbjct: 19 LNSVDIPALAADDILVQNQAIGINPVDWKFIKAN-PINWSNGHVPGVDGAGVIVKVGAKV 77
Query: 77 SRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
+G +V +L G +AE + +V +P +S + AAA P T W
Sbjct: 78 DSKXLGRRVAYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAW 132
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 42/265 (15%)
Query: 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILS 71
E L +++V P+ + +EVLI++ + R D KG P G E +GTI+
Sbjct: 14 EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVE 73
Query: 72 VGKNVSRWKVGDQVCAL---------------------------LGGGGYAEKVAVPAGQ 104
VG+ +++ K GD V GG++E + V + +
Sbjct: 74 VGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSR 132
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTV-----FMTSHLSPGESFLVHGGSSGIGTFAIQM 159
L + +S +AA + T + F++ P ++ G G+ + IQ+
Sbjct: 133 WLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEP---VVIVNGIGGLAVYTIQI 189
Query: 160 GKC--QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217
K + + + + S++ +LGAD K D + + + T G G + +D +G
Sbjct: 190 LKALMKNITIVGISRSKKHRDFALELGADYVSEMK--DAESLINKLTDGLGASIAIDLVG 247
Query: 218 ASYFQRNLGS-LNIDGRLFIIGTQG 241
NLG L +G + ++G +G
Sbjct: 248 TEETTYNLGKLLAQEGAIILVGMEG 272
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 108/281 (38%), Gaps = 41/281 (14%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSV 72
+ ++ V P+ D++L+KVEA + D G +P PP G E G ++
Sbjct: 35 ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTPPVTL----GHEFCGIVVEA 90
Query: 73 GKNVSRWKVGDQV---------------------CALLGG------GGYAEKVAVPAGQV 105
G V G ++ C L GG+AE V VP Q
Sbjct: 91 GSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQA 150
Query: 106 LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG- 164
+P + A +AC + S + G + + GG IG +Q+ + G
Sbjct: 151 FEIPLTLDPVHGAFCEPLACCLHGVDL--SGIKAGSTVAILGGGV-IGLLTVQLARLAGA 207
Query: 165 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG--GKGVDVILDCMG-ASYF 221
V ++ K + +++GA ++ D V + G GVDV+++C G A
Sbjct: 208 TTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETV 267
Query: 222 QRNLGSLNIDGRLFIIGT-QGGAKTELNITSLFAKRLTVQG 261
+++ G + I+G G K E+ + + L V G
Sbjct: 268 KQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLG 308
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 105/276 (38%), Gaps = 62/276 (22%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V + G P L ++E+E K EV IK+ ATA+ D G+ P+G P
Sbjct: 8 KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
G +G + SVG+ V++ K GD V L +K+ V G+ L +
Sbjct: 64 LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 122
Query: 109 PSGVS-----------LKDAAAFPE-----------------------VAC---TVWSTV 131
P G S + F E + C T +
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190
T+ L PG V G G+G I K G R+ +++K A K+ GA CIN
Sbjct: 183 VNTAKLEPGSVCAVF-GLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 241
Query: 191 YKTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 223
+DF ++E E GVD +C+G R
Sbjct: 242 --PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 275
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 94/224 (41%), Gaps = 47/224 (20%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MK++V G ++++ E P+IK DEV +K+ ++ L +D L R GA
Sbjct: 1 MKSVVNDTDG---IVRVAESVIPEIKHQDEVRVKIASSGLCGSD-LPRIFK----NGAHY 52
Query: 60 YP---GLECSGTILSVGKNVSRWKVGDQV---------------------CA---LLGG- 91
YP G E SG I +VG V GD V CA +G
Sbjct: 53 YPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR 112
Query: 92 --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPG--ESFLVHG 147
GG+AE + V V +P+ + ++D A + TV F HL+ G ++
Sbjct: 113 RDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPI--TVGLHAF---HLAQGCENKNVIII 167
Query: 148 GSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCIN 190
G+ IG AIQ G + V S EKLA+ K GA N
Sbjct: 168 GAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFN 211
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINY 191
H++ G ++ +V G + G+ A Q+G G RV G+ EK + + +LG D INY
Sbjct: 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINY 214
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
K +D VA E+ GVDV D +G + + +N + + + G
Sbjct: 215 K-KDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCG 260
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 136 HLSPG--ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINY 191
H++ G ++ +V G + G+ A Q+G G RV G+ EK + + +LG D INY
Sbjct: 150 HITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINY 209
Query: 192 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238
K +D VA E+ GVDV D +G + + +N + + + G
Sbjct: 210 K-KDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCG 255
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESF----LVHGGSSGIGTFAIQMGKCQGVR- 166
VS KD +A +T + P ESF +V G+ +G F + + + G
Sbjct: 164 VSEKDDLDVLAMAMCSGATAYHAFDEYP-ESFAGKTVVIQGAGPLGLFGVVIARSLGAEN 222
Query: 167 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK---EETGGKGVDVILDCMGAS 219
V V AGS +L + +++GAD+ +N + R K + T G+G D IL+ G S
Sbjct: 223 VIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDS 278
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA + + GSP L ++E+E K EV I+V AT + D + PK + +P
Sbjct: 10 KAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCHTDI-----NATDPKKKALFP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV 85
G EC+G + SVG V+ +K GD+V
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKV 89
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V +P P V++ +V PQ EV IK+ TAL D G P+G P
Sbjct: 10 KAAVAYEPNKPLVIEDVQVAPPQA--GEVRIKILYTALCHTDAYTWSGK--DPEGLFPCI 65
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV 85
G E +G + SVG+ V+ + GD V
Sbjct: 66 LGHEAAGIVESVGEGVTEVQAGDHV 90
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 86/239 (35%), Gaps = 45/239 (18%)
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGG------- 91
PG E G +++VG V ++ GD V C + G
Sbjct: 80 PGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTP 139
Query: 92 -------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPG-ESF 143
GGY++++ V VL + + AA + C +T H G
Sbjct: 140 DEPGHTLGGYSQQIVVHERYVLRIRH--PQEQLAAVAPLLCAGITTYSPLRHWQAGPGKK 197
Query: 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 203
+ G G+G I++ G V SE K K LGAD +N + D +A
Sbjct: 198 VGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMA----- 252
Query: 204 TGGKGVDVILDCMGASYFQRNLGS-LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261
K D IL+ + A + + + L DG + ++G + +L KR + G
Sbjct: 253 AHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAG 311
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P+ K EV IK+ AT + R D KG+ S +P
Sbjct: 10 KAAVLWEQKQPFSIEEIEVAPPKTK--EVRIKILATGICRTDDHVIKGTM-----VSKFP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ K GD+V L
Sbjct: 63 VIVGHEATGIVESIGEGVTTVKPGDKVIPLF 93
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P+ K EV IK+ AT + R D KG+ S +P
Sbjct: 10 KAAVLWEQKQPFSIEEIEVAPPKTK--EVRIKILATGICRTDDHVIKGTM-----VSKFP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ K GD+V L
Sbjct: 63 VIVGHEATGIVESIGEGVTTVKPGDKVIPLF 93
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
And Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
And Inhibitor
Length = 376
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA + + GSP L ++E+E K EV I+V AT + D + PK + +P
Sbjct: 10 KAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDI-----NATDPKKKALFP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV 85
G EC+G + SVG V+ +K GD+V
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKV 89
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V +P P V++ +V PQ EV +KV TAL D G P+G P
Sbjct: 28 KAAVAWEPNKPLVIEDVQVAPPQA--GEVRVKVLYTALCHTDAYTWSGK--DPEGLFPCV 83
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV 85
G E +G + SVG+ V+ + GD V
Sbjct: 84 LGHEAAGIVESVGEGVTEVQPGDHV 108
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol
Dehydrogenase- Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol
Dehydrogenase- Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase
Complexed With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase
Complexed With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues
Bound To Alcohol Dehydrogenase: Specificity And
Substrate Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues
Bound To Alcohol Dehydrogenase: Specificity And
Substrate Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues
Bound To Alcohol Dehydrogenase: Specificity And
Substrate Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues
Bound To Alcohol Dehydrogenase: Specificity And
Substrate Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh
And R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh
And R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh
And R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh
And R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated
Liver Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2,2,2- Trifluoroethanol
Length = 374
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad
Double Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double
Mutant Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG
MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl
Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG
MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl
Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG
MUTANT Complexed With Nad+ And 2,3-Difluorobenzyl
Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG
MUTANT Complexed With Nad+ And 2,3-Difluorobenzyl
Alcohol
Length = 374
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 35/185 (18%)
Query: 62 GLECSGTILSVGKNVSRWKVGDQVC----------------------ALLGGGGYAE--- 96
G E G I+ VG V R KVGD+V +LGG ++
Sbjct: 58 GHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKD 117
Query: 97 -------KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
V + +P + +DA ++ T + + +++ G++ V G
Sbjct: 118 GVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAEL-ANIKLGDTVCVIG-I 175
Query: 150 SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
+G ++ G R+F + + + GA INYK D V ++ + T GKG
Sbjct: 176 GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKG 235
Query: 209 VDVIL 213
VD ++
Sbjct: 236 VDKVV 240
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 35/185 (18%)
Query: 62 GLECSGTILSVGKNVSRWKVGDQVC----------------------ALLGGGGYAE--- 96
G E G I+ VG V R KVGD+V +LGG ++
Sbjct: 58 GHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKD 117
Query: 97 -------KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGS 149
V + +P + +DA ++ T + + +++ G++ V G
Sbjct: 118 GVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAEL-ANIKLGDTVCVIG-I 175
Query: 150 SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208
+G ++ G R+F + + + GA INYK D V ++ + T GKG
Sbjct: 176 GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKG 235
Query: 209 VDVIL 213
VD ++
Sbjct: 236 VDKVV 240
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp
Of Horse Liver Alcohol Dehydrogenase In Complex With
Nad And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp
Of Horse Liver Alcohol Dehydrogenase In Complex With
Nad And Inhibitor Trifluoroethanol
Length = 374
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPL 92
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala)
Of Horse Liver Alcohol Dehydrogenase In Complex With
The Isosteric Nad Analog Cpad
Length = 374
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPL 92
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPL 92
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 118/296 (39%), Gaps = 45/296 (15%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ----RKGSYPPPKGAS 58
++V+ PG L+L+ P+ +EVL+++ + + +D R G++ K
Sbjct: 10 SLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPM- 65
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------------------------- 91
G E SGT+ VG +V K GD+V G
Sbjct: 66 -VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124
Query: 92 -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
G A +P V+ ++ A ++ + + ++ G LV G+
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHAC--RRGGVTLGHKVLV-CGAG 181
Query: 151 GIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTE--DFVARVKEETGGK 207
IG + + K G +V VT S +L+ K++GAD+ + E +AR E G
Sbjct: 182 PIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGC 241
Query: 208 GVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
+V ++C GA + Q + + G L ++G G T + + + + ++G+
Sbjct: 242 KPEVTIECTGAEASIQAGIYATRSGGTLVLVGL-GSEMTTVPLLHAAIREVDIKGV 296
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH--LSPGESFLVHGGS 149
GG+A+ V V+ +P G++++ AA TV+S + SH L G
Sbjct: 133 GGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPL---SHFGLKQPGLRGGILGL 189
Query: 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVA---RVKEETG 205
G+G +++ K G V V + S +K +DLGAD D+V + K
Sbjct: 190 GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGAD--------DYVIGSDQAKMSEL 241
Query: 206 GKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG 238
+D ++D + + + L L +DG+L ++G
Sbjct: 242 ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMG 275
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 117/296 (39%), Gaps = 45/296 (15%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ----RKGSYPPPKGAS 58
++V+ PG L+L+ P+ +EVL++ + + +D R G++ K
Sbjct: 10 SLVVHGPGD---LRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPX- 65
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------------------------- 91
G E SGT+ VG +V K GD+V G
Sbjct: 66 -VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPD 124
Query: 92 -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
G A +P V+ ++ A ++ + + ++ G LV G+
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHAC--RRGGVTLGHKVLV-CGAG 181
Query: 151 GIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTE--DFVARVKEETGGK 207
IG + + K G +V VT S +L+ K++GAD+ + E +AR E G
Sbjct: 182 PIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGC 241
Query: 208 GVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
+V ++C GA + Q + + G L ++G G T + + + + ++G+
Sbjct: 242 KPEVTIECTGAEASIQAGIYATRSGGTLVLVGL-GSEXTTVPLLHAAIREVDIKGV 296
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase
Gamma-2- Gamma-2 Isoform Complexed With
N-1-Methylheptylformamide Determined To 1.45 Angstrom
Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase
Gamma-2- Gamma-2 Isoform Complexed With
N-1-Methylheptylformamide Determined To 1.45 Angstrom
Resolution
Length = 374
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ A + R+D G+ +P P
Sbjct: 10 KAAVLWELKKP--FSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + SVG+ V+ K GD+V L
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLF 93
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 110 SGVSLKDAAAFPEVACTV-------WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC 162
+ V+ DAA+ E C + + + + ++PG + V G G+G + K
Sbjct: 155 NAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFG-LGGVGLSVVMGCKA 213
Query: 163 QGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF---VARVKEETGGKGVDVILDCMG 217
G R+ +++K A K+LGA CIN +D+ + V +E GVD + +G
Sbjct: 214 AGAARIIAVDINKDKFAKAKELGATECIN--PQDYKKPIQEVLKEMTDGGVDFSFEVIG 270
>pdb|2DUL|A Chain A, Crystal Structure Of Trna G26 Methyltransferase Trm1 In
Apo Form From Pyrococcus Horikoshii
pdb|2EJT|A Chain A, Complex Structure Of Trm1 From Pyrococcus Horikoshii With
S-Adenosyl- L-Methionine
pdb|2EJU|A Chain A, Complex Structure Of Trm1 From Pyrococcus Horikoshii With
S-Adenosyl- L-Homocystein
pdb|2YTZ|A Chain A, Complex Structure Of Trm1 From Pyrococcus Horikoshii With
S- Adenosyl-l-homocystein In The Orthorhombic
Crystal-lattice
pdb|2YTZ|B Chain B, Complex Structure Of Trm1 From Pyrococcus Horikoshii With
S- Adenosyl-l-homocystein In The Orthorhombic
Crystal-lattice
Length = 378
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 162 CQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGASY 220
C V + G + A DLG DV + YK F A VK + G + D L+ +G Y
Sbjct: 192 CHEVGTRILVGVIARYAAKYDLGIDVILAYYKDHYFRAFVKLKDGARKGDETLEKLGYIY 251
Query: 221 FQRNLGSLNID 231
F G ++
Sbjct: 252 FDDKTGKFELE 262
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 120/296 (40%), Gaps = 45/296 (15%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ----RKGSYPPPKGAS 58
++V+ PG L+L+ P+ +EVL+K+ + + +D R G + K
Sbjct: 9 SLVVHGPGD---LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPM- 64
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKV---------------AVP-- 101
G E SGT++ VG V + GD+V G ++ A P
Sbjct: 65 -VLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPD 123
Query: 102 -----------AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSS 150
A +P V+ ++ A ++ + + + ++ G LV G+
Sbjct: 124 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHAC--RRAGVTLGNKVLV-CGAG 180
Query: 151 GIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTE--DFVARVKEETGGK 207
IG + K G +V VT S +L+ K++GAD + E + +A+ E G
Sbjct: 181 PIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGLLGS 240
Query: 208 GVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262
+V ++C G + Q + + + G L ++G G T + + + + ++G+
Sbjct: 241 KPEVTIECTGVETSIQAGIYATHSGGTLVLVGL-GSEMTSVPLVHAATREVDIKGV 295
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ A + R+D G+ +P P
Sbjct: 10 KAAVLWEQKKP--FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-----VAPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ A + R+D G+ +P P
Sbjct: 10 KAAVLWEQKKP--FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-----VAPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 59/153 (38%), Gaps = 41/153 (26%)
Query: 135 SHLSP-----GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 189
SH+ P G LV GGS GIG Q G RVF+ A E C D +
Sbjct: 19 SHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAE---ACADTATRLSA 75
Query: 190 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII----GTQGGAKT 245
+ A + E GA + LG L+ RL I+ GT GA
Sbjct: 76 YGDCQAIPADLSSEA------------GARRLAQALGELS--ARLDILVNNAGTSWGAAL 121
Query: 246 E------------LNITSLFAKRLTVQGIVPLI 266
E LN+TS+F+ +Q ++PL+
Sbjct: 122 ESYPVSGWEKVMQLNVTSVFS---CIQQLLPLL 151
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRV 167
+P + L+ A P++ T + + + G S +V G +G I K +G
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELAD-IQMGSSVVVIG-IGAVGLMGIAGAKLRGAGR 193
Query: 168 FVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219
+ GS + K GA +NYK V +V + T GKGVD ++ G S
Sbjct: 194 IIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 100/271 (36%), Gaps = 65/271 (23%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P K EV IK+ A + R D G+ +P P
Sbjct: 10 KAAVLWEVKKPFSIEDVEVAPP--KAYEVRIKMVAVGICRTDDHVVSGNL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL------------------------------ 88
G E +G + SVG+ V+ K GD+V L
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT 122
Query: 89 ------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130
LG +++ V V + + L+ T + +
Sbjct: 123 LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGS 182
Query: 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189
+ ++PG + V G G+G A+ K G R+ +++K A K+LGA CI
Sbjct: 183 AVNVAKVTPGSTCAVFG-LGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI 241
Query: 190 NYKTEDF---VARVKEETGGKGVDVILDCMG 217
N +D+ + V +E GVD + +G
Sbjct: 242 N--PQDYKKPIQEVLKEMTDGGVDFSFEVIG 270
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRV 167
+P + L+ A P++ T + + + G S +V G +G I K +G
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELAD-IEMGSSVVVIG-IGAVGLMGIAGAKLRGAGR 193
Query: 168 FVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219
+ GS + K GA +NYK V +V + T GKGVD ++ G S
Sbjct: 194 IIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 93/253 (36%), Gaps = 61/253 (24%)
Query: 29 EVLIKVEATALNRADTLQ-----RKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD 83
+VLI + + +D ++G YP PG E +G I VGK V ++K+GD
Sbjct: 31 DVLIDILYAGICHSDIHSAYSEWKEGIYPM------IPGHEIAGIIKEVGKGVKKFKIGD 84
Query: 84 ----------------------QVCALL---------------GGGGYAEKVAVPAGQVL 106
Q C + GGY+ + V V+
Sbjct: 85 VVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVI 144
Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR 166
V L+ A T +S + S ++ G V G G+G+ A++ G
Sbjct: 145 SVDKNAPLEKVAPLLCAGITTYSPL-KFSKVTKGTKVGV-AGFGGLGSMAVKYAVAMGAE 202
Query: 167 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNL 225
V V A +E K +G ++ T+ + KEE +D I+ + Y + L
Sbjct: 203 VSVFARNEHKKQDALSMGVK---HFYTDP--KQCKEE-----LDFIISTIPTHYDLKDYL 252
Query: 226 GSLNIDGRLFIIG 238
L +G L ++G
Sbjct: 253 KLLTYNGDLALVG 265
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 100/271 (36%), Gaps = 65/271 (23%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P K EV IK+ A + R D G+ +P P
Sbjct: 10 KAAVLWEVKKPFSIEDVEVAPP--KAYEVRIKMVAVGICRTDDHVVSGNL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL------------------------------ 88
G E +G + SVG+ V+ K GD+V L
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT 122
Query: 89 ------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130
LG +++ V V + + L+ T + +
Sbjct: 123 LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGS 182
Query: 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189
+ ++PG + V G G+G A+ K G R+ +++K A K+LGA CI
Sbjct: 183 AVNVAKVTPGSTCAVFG-LGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI 241
Query: 190 NYKTEDF---VARVKEETGGKGVDVILDCMG 217
N +D+ + V +E GVD + +G
Sbjct: 242 N--PQDYKKPIQEVLKEMTDGGVDFSFEVIG 270
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213
R+F + + + GA INYK D V ++ + T GKGVD ++
Sbjct: 193 RIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVV 240
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 107/271 (39%), Gaps = 65/271 (23%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ A + D G+ +P P
Sbjct: 10 KAAVLWELKKP--FSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTM-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV----------CALLGG--GGYAEK--VAVPAGQ 104
G E +G + SVG+ V+ K GD+V C + Y K V+ P G
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGT 122
Query: 105 VL-----------PV----------------PSGVSLKDAAAFPEVACTV-------WST 130
+ P+ + V+ DAA+ E C + + +
Sbjct: 123 LQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGS 182
Query: 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189
+ ++PG + V G G+G AI K G R+ +++K A K+LGA CI
Sbjct: 183 AVNVAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI 241
Query: 190 NYKTEDF---VARVKEETGGKGVDVILDCMG 217
N +D+ + V +E GVD + +G
Sbjct: 242 N--PQDYKKPIQEVLKEMTDGGVDFSFEVIG 270
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199
G++ L+ G SSGIG+ ++ G +V ++ +EEKL K LG + NY E
Sbjct: 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKL---KSLGNALKDNYTIEVCNLA 70
Query: 200 VKEE 203
KEE
Sbjct: 71 NKEE 74
>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|B Chain B, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|C Chain C, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|D Chain D, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|E Chain E, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|F Chain F, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|G Chain G, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|H Chain H, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
Length = 265
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 158 QMGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVD 210
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D
Sbjct: 3 HMGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD 61
Query: 211 VILDC 215
++L C
Sbjct: 62 IVLQC 66
>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex
pdb|3PJE|B Chain B, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex
Length = 270
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 159 MGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDV 211
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D+
Sbjct: 1 MGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 59
Query: 212 ILDC 215
+L C
Sbjct: 60 VLQC 63
>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex
pdb|3PJD|B Chain B, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex
Length = 270
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 159 MGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDV 211
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D+
Sbjct: 1 MGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 59
Query: 212 ILDC 215
+L C
Sbjct: 60 VLQC 63
>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex
pdb|3PJF|B Chain B, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex
Length = 270
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 159 MGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDV 211
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D+
Sbjct: 1 MGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 59
Query: 212 ILDC 215
+L C
Sbjct: 60 VLQC 63
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 110 SGVSLKDAAAFPEVACTV-------WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKC 162
+ V+ DAA+ E C + + + + ++PG + V G G+G A+ K
Sbjct: 155 NAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFG-LGGVGLSAVMGCKA 213
Query: 163 QGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF---VARVKEETGGKGVDVILDCMG 217
G R+ +++K A K+LGA CIN +D+ + V +E GVD + +G
Sbjct: 214 AGAARIIAVDINKDKFAKAKELGATECIN--PQDYKKPIQEVLKEMTDGGVDFSFEVIG 270
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 102/278 (36%), Gaps = 79/278 (28%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P K EV IK+ A + D G+ +P P
Sbjct: 10 KAAVLWEVKKPFSIEDVEVAPP--KAYEVRIKMVAVGICHTDDHVVSGNL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL------------------------------ 88
G E +G + SVG+ V+ K GD+V L
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGT 122
Query: 89 ------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV--- 127
LG +++ V V + DAA+ E C +
Sbjct: 123 LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKI-------DAASPLEKVCLIGCG 175
Query: 128 ----WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD 182
+ + + ++PG + V G G+G A+ K G R+ +++K A K+
Sbjct: 176 FSTGYGSAVNVAKVTPGSTCAVFG-LGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKE 234
Query: 183 LGADVCINYKTEDF---VARVKEETGGKGVDVILDCMG 217
LGA CIN +D+ + V +E GVD + +G
Sbjct: 235 LGATECIN--PQDYKKPIQEVLKEMTDGGVDFSFEVIG 270
>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan
Complex
pdb|1C14|B Chain B, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan
Complex
pdb|1I2Z|A Chain A, E. Coli Enoyl Reductase In Complex With Nad And Brl-12654
pdb|1I2Z|B Chain B, E. Coli Enoyl Reductase In Complex With Nad And Brl-12654
pdb|1I30|A Chain A, E. Coli Enoyl Reductase +nad+sb385826
pdb|1I30|B Chain B, E. Coli Enoyl Reductase +nad+sb385826
pdb|1LX6|A Chain A, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Benzamide Inhibitor
pdb|1LX6|B Chain B, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Benzamide Inhibitor
pdb|1LXC|A Chain A, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Acrylamide Inhibitor
pdb|1LXC|B Chain B, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Acrylamide Inhibitor
pdb|1MFP|A Chain A, E. Coli Enoyl Reductase In Complex With Nad And Sb611113
pdb|1MFP|B Chain B, E. Coli Enoyl Reductase In Complex With Nad And Sb611113
pdb|2FHS|A Chain A, Structure Of Acyl Carrier Protein Bound To Fabi, The Enoyl
Reductase From Escherichia Coli
pdb|2FHS|B Chain B, Structure Of Acyl Carrier Protein Bound To Fabi, The Enoyl
Reductase From Escherichia Coli
Length = 262
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 159 MGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDV 211
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D+
Sbjct: 1 MGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 59
Query: 212 ILDC 215
+L C
Sbjct: 60 VLQC 63
>pdb|2JGV|A Chain A, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase In Complex With Adp
pdb|2JGV|B Chain B, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase In Complex With Adp
pdb|2JGV|C Chain C, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase In Complex With Adp
pdb|2JGV|D Chain D, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase In Complex With Adp
pdb|2Q5R|A Chain A, Structure Of Apo Staphylococcus Aureus
D-Tagatose-6-Phosphate Kinase
pdb|2Q5R|B Chain B, Structure Of Apo Staphylococcus Aureus
D-Tagatose-6-Phosphate Kinase
pdb|2Q5R|C Chain C, Structure Of Apo Staphylococcus Aureus
D-Tagatose-6-Phosphate Kinase
pdb|2Q5R|D Chain D, Structure Of Apo Staphylococcus Aureus
D-Tagatose-6-Phosphate Kinase
Length = 330
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 193 TEDFVARVKEETGGKGVDVILDCMGAS 219
+D+ A++ E KGV VILDC GA+
Sbjct: 162 NQDYYAQIIERCQNKGVPVILDCSGAT 188
>pdb|2JG1|A Chain A, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase With Cofactor And Substrate
pdb|2JG1|B Chain B, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase With Cofactor And Substrate
pdb|2JG1|C Chain C, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase With Cofactor And Substrate
pdb|2JG1|D Chain D, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase With Cofactor And Substrate
Length = 330
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 193 TEDFVARVKEETGGKGVDVILDCMGAS 219
+D+ A++ E KGV VILDC GA+
Sbjct: 162 NQDYYAQIIERCQNKGVPVILDCSGAT 188
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
Length = 381
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA + + G P L ++EVE K EV I++ AT+L D + +P
Sbjct: 12 KAAIAWEAGKP--LCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFE----GLAFP 65
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + S+G V+ K GD+V L
Sbjct: 66 VIVGHEAAGIVESIGPGVTNVKPGDKVIPL 95
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG 184
T + + ++PG + V G G+G A+ K G R+ + EK K LG
Sbjct: 185 TGYGAAINNAKVTPGSTCAVFG-LGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 185 ADVCINYKTEDFVARVKE---ETGGKGVDVILDCMGAS 219
A C+N + D ++E E GVD LDC G S
Sbjct: 244 ATDCLNPR--DLHKPIQEVIIELTKGGVDFALDCAGGS 279
>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|B Chain B, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|C Chain C, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|D Chain D, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
Length = 285
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 15/87 (17%)
Query: 159 MGKCQGVRVFVTAGSEEK---LAVCKDL---GADVCINYKTEDFVARVKEETGGKGVDVI 212
MG +G R +T + E+ + K GA + Y T RV+E G G D++
Sbjct: 16 MGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV 75
Query: 213 LDCMGA---------SYFQRNLGSLNI 230
+ C + + + N GSL+I
Sbjct: 76 VKCDVSLDEDIKNLKKFLEENWGSLDI 102
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex:
Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase
(Adh8) With The Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex:
Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase
(Adh8) With The Cofactor Nadp
Length = 373
Score = 30.8 bits (68), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V +P P L+ V P K EV IK+ A+ + +D+ K P S +P
Sbjct: 11 KAAVAWEPHKPLSLETITVAPP--KAHEVRIKILASGICGSDSSVLKEIIP-----SKFP 63
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E G + S+G V+ K GD+V L
Sbjct: 64 VILGHEAVGVVESIGAGVTCVKPGDKVIPLF 94
>pdb|3QZU|A Chain A, Crystal Structure Of Bacillus Subtilis Lipase A 7-Fold
Mutant; The Outcome Of Directed Evolution Towards
Thermostability
pdb|3QZU|B Chain B, Crystal Structure Of Bacillus Subtilis Lipase A 7-Fold
Mutant; The Outcome Of Directed Evolution Towards
Thermostability
Length = 181
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 17/72 (23%)
Query: 196 FVARVKEETGGKGVDVILDCMGAS---YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 252
FV +V +ETG K VD++ MG + Y+ +NL GG K +T
Sbjct: 58 FVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL--------------DGGNKVANVVTLG 103
Query: 253 FAKRLTVQGIVP 264
A RLT +P
Sbjct: 104 GANRLTTGDALP 115
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRV 167
+P + L++A ++ T + + + G S +V G +G I K +G
Sbjct: 136 LPKDMPLENAVMITDMMTTGFHGAELAD-IQMGSSVVVIG-IGAVGLMGIAGAKLRGAGR 193
Query: 168 FVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219
+ GS + K GA +NYK V +V + T GKGVD ++ G S
Sbjct: 194 IIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRV 167
+P + L++A ++ T + + + G S +V G +G I K +G
Sbjct: 136 LPKDMPLENAVMITDMMTTGFHGAELAD-IQMGSSVVVIG-IGAVGLMGIAGAKLRGAGR 193
Query: 168 FVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219
+ GS + K GA +NYK V +V + T GKGVD ++ G S
Sbjct: 194 IIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|1I6W|A Chain A, The Crystal Structure Of Bacillus Subtilis Lipase: A
Minimal AlphaBETA HYDROLASE ENZYME
pdb|1I6W|B Chain B, The Crystal Structure Of Bacillus Subtilis Lipase: A
Minimal AlphaBETA HYDROLASE ENZYME
pdb|1ISP|A Chain A, Crystal Structure Of Bacillus Subtilis Lipase At 1.3a
Resolution
pdb|1R4Z|A Chain A, Bacillus Subtilis Lipase A With Covalently Bound Rc-Ipg-
Phosphonate-Inhibitor
pdb|1R4Z|B Chain B, Bacillus Subtilis Lipase A With Covalently Bound Rc-Ipg-
Phosphonate-Inhibitor
pdb|1R50|A Chain A, Bacillus Subtilis Lipase A With Covalently Bound Sc-Ipg-
Phosphonate-Inhibitor
pdb|1R50|B Chain B, Bacillus Subtilis Lipase A With Covalently Bound Sc-Ipg-
Phosphonate-Inhibitor
Length = 181
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 173 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGAS---YFQRNL 225
S +KL D NY FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 32 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 90
>pdb|2QXT|A Chain A, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 4.5
pdb|2QXT|B Chain B, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 4.5
pdb|2QXU|A Chain A, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|B Chain B, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|C Chain C, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|D Chain D, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|E Chain E, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|F Chain F, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|G Chain G, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|H Chain H, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
Length = 179
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 173 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGAS---YFQRNL 225
S +KL D NY FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 30 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 88
>pdb|3D2A|A Chain A, Structure Of 1-17a4, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 173 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGAS---YFQRNL 225
S +KL D NY FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 32 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 90
>pdb|1T2N|A Chain A, Structure Of A Thermostable Triple Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 173 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGAS---YFQRNL 225
S +KL D NY FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 32 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 90
>pdb|1T4M|A Chain A, Structure Of A Thermostable Double Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 196 FVARVKEETGGKGVDVILDCMGAS---YFQRNL 225
FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 58 FVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 90
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 135 SHLSPGES--FLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL 177
SH++ +S LV G +SGIG A ++GK +G+RVFV A EE L
Sbjct: 19 SHMATQDSEVALVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGL 63
>pdb|2FFH|A Chain A, The Signal Sequence Binding Protein Ffh From Thermus
Aquaticus
pdb|2FFH|B Chain B, The Signal Sequence Binding Protein Ffh From Thermus
Aquaticus
pdb|2FFH|C Chain C, The Signal Sequence Binding Protein Ffh From Thermus
Aquaticus
Length = 425
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 183 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 234
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 39 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 93
Query: 235 --------FIIGTQGGAKT 245
F++G QG KT
Sbjct: 94 VLKDRNLWFLVGLQGSGKT 112
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 135 SHLSPGES--FLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL 177
SH++ +S LV G +SGIG A ++GK +G+RVFV A EE L
Sbjct: 19 SHMATQDSEVALVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGL 63
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 135 SHLSPGES--FLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL 177
SH++ +S LV G +SGIG A ++GK +G+RVFV A EE L
Sbjct: 15 SHMATQDSEVALVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGL 59
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 135 SHLSPGES--FLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL 177
SH++ +S LV G +SGIG A ++GK +G+RVFV A EE L
Sbjct: 19 SHMATQDSEVALVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGL 63
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 135 SHLSPGES--FLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL 177
SH++ +S LV G +SGIG A ++GK +G+RVFV A EE L
Sbjct: 19 SHMATQDSEVALVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGL 63
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 135 SHLSPGES--FLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL 177
SH++ +S LV G +SGIG A ++GK +G+RVFV A EE L
Sbjct: 15 SHMATQDSEVALVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGL 59
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 135 SHLSPGES--FLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL 177
SH++ +S LV G +SGIG A ++GK +G+RVFV A EE L
Sbjct: 19 SHMATQDSEVALVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGL 63
>pdb|1RJ9|B Chain B, Structure Of The Heterodimer Of The Conserved Gtpase
Domains Signal Recognition Particle (Ffh) And Its
Receptor (Ftsy)
Length = 300
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 183 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 234
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 39 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 93
Query: 235 --------FIIGTQGGAKT 245
F++G QG KT
Sbjct: 94 VLKDRNLWFLVGLQGSGKT 112
>pdb|2C03|A Chain A, Gdp Complex Of Srp Gtpase Ffh Ng Domain
pdb|2C03|B Chain B, Gdp Complex Of Srp Gtpase Ffh Ng Domain
Length = 297
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 183 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 234
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 39 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 93
Query: 235 --------FIIGTQGGAKT 245
F++G QG KT
Sbjct: 94 VLKDRNLWFLVGLQGSGKT 112
>pdb|2NG1|A Chain A, N And Gtpase Domains Of The Signal Sequence Recognition
Protein Ffh From Thermus Aquaticus
Length = 293
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 183 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 234
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 38 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 92
Query: 235 --------FIIGTQGGAKT 245
F++G QG KT
Sbjct: 93 VLKDRNLWFLVGLQGSGKT 111
>pdb|1FFH|A Chain A, N And Gtpase Domains Of The Signal Sequence Recognition
Protein Ffh From Thermus Aquaticus
Length = 294
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 183 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 234
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 38 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 92
Query: 235 --------FIIGTQGGAKT 245
F++G QG KT
Sbjct: 93 VLKDRNLWFLVGLQGSGKT 111
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE--DFV 197
G + LV GGS GIG ++ G RV+ + +E++L C ++ + +N + D +
Sbjct: 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLL 80
Query: 198 ARVKEETGGKGVDVILD 214
+R + + + V + D
Sbjct: 81 SRTERDKLMQTVAHVFD 97
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCI---NYKTED 195
G LV G + GIG + QG V + E+KL + DLG DV + N
Sbjct: 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRK 86
Query: 196 FVARVKE--ETGGKGVDVILDCMGAS---YFQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250
+ ++ E E +G+D++++ G + F R + + D L + T T I
Sbjct: 87 SIKQLAEVAEREMEGIDILVNNAGITRDGLFVR-MQDQDWDDVLAVNLTAASTLTRELIH 145
Query: 251 SLFAKR----LTVQGIVPLISGP----WCSSK 274
S+ +R + + IV ++ P +C++K
Sbjct: 146 SMMRRRYGRIINITSIVGVVGNPGQTNYCAAK 177
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 141 ESFLVHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKL 177
E LV G +SGIG A ++GK +G+RVFV A EE L
Sbjct: 7 EVALVTGATSGIGLEIARRLGK-EGLRVFVCARGEEGL 43
>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Benzo-Diazaborine
pdb|1DFG|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Benzo-Diazaborine
pdb|1DFH|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Thieno-Diazaborine
pdb|1DFH|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Thieno-Diazaborine
pdb|1DFI|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|C Chain C, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|D Chain D, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1QG6|A Chain A, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|B Chain B, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|C Chain C, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|D Chain D, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1D8A|A Chain A, E. Coli Enoyl ReductaseNAD+TRICLOSAN COMPLEX
pdb|1D8A|B Chain B, E. Coli Enoyl ReductaseNAD+TRICLOSAN COMPLEX
Length = 261
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 160 GKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDVI 212
G G R+ VT G KL++ + GA++ Y+ + RV+E G D++
Sbjct: 1 GFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV 59
Query: 213 LDC 215
L C
Sbjct: 60 LQC 62
>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From
Pseudomonas Sp. Lb400
Length = 277
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178
GE+ L+ GG+SG+G + +G +V V S E+LA
Sbjct: 5 GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLA 43
>pdb|3QMM|A Chain A, Structure Of 6b, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3QMM|B Chain B, Structure Of 6b, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 20/111 (18%)
Query: 161 KCQGVRVFVTAG--SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILD 214
+G++ ++ + S +KL D NY FV +V +ETG K VD++
Sbjct: 18 NFEGIKSYLVSQGWSRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAH 76
Query: 215 CMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQGIVP 264
MG + L+ I G N+ +L A RLT P
Sbjct: 77 SMGGA------------NTLYYIKYLDGGNKVANVVTLGGANRLTTDKAPP 115
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Query: 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRV 167
+P + L++A ++ T + + + G S +V G +G I K +G
Sbjct: 136 LPKDMPLENAVMITDMMTTGFHGAELAD-IEMGSSVVVIG-IGAVGLMGIAGAKLRGAGR 193
Query: 168 FVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219
+ GS + K GA +NYK +V + T GKGVD ++ G S
Sbjct: 194 IIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 135 SHLS--PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD--LGADVCIN 190
SH++ G+S ++ G S+GIG A + +G +V +T +E++L K L A V
Sbjct: 19 SHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV--- 75
Query: 191 YKTEDFVARVKEETGGKGVDVILDCMGASY 220
E A V + T G D I++ A +
Sbjct: 76 -PAEKINAVVADVTEASGQDDIINTTLAKF 104
>pdb|3D2B|A Chain A, Structure Of 2d9, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2B|B Chain B, Structure Of 2d9, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAG--SEEKLAVCKDLGADVCINYKT----EDFV 197
+VHG FA G++ ++ + S +KL D NY FV
Sbjct: 8 MVHGIGGASSNFA-------GIKSYLVSQGWSRDKLYAV-DFWDKTGTNYNNGPVLSRFV 59
Query: 198 ARVKEETGGKGVDVILDCMGAS 219
+V +ETG K VD++ MG +
Sbjct: 60 QKVLDETGAKKVDIVAHSMGGA 81
>pdb|3D2C|A Chain A, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|B Chain B, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|C Chain C, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|D Chain D, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|E Chain E, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|F Chain F, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|G Chain G, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|H Chain H, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|I Chain I, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|J Chain J, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|K Chain K, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|L Chain L, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 161 KCQGVRVFVTAG--SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILD 214
+G++ ++ + S +KL D NY FV +V +ETG K VD++
Sbjct: 18 NFEGIKSYLVSQGWSRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAH 76
Query: 215 CMGAS 219
MG +
Sbjct: 77 SMGGA 81
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 110/281 (39%), Gaps = 45/281 (16%)
Query: 10 GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASPYP-GLECSG 67
SP + +Q+ E ++K+ EV + V +T + +D + G P + G E +G
Sbjct: 25 ASPSLESVQKGE--ELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAG 82
Query: 68 TILSVGKNVSRWKVGDQV----------CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
+++V +V KVGD+V C G Y V PVP L+
Sbjct: 83 EVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPG--LLRRY 140
Query: 118 AAFPEVAC-----TVWSTVFMTSHLSP------------GESFLVHGGSSGIGTFAIQMG 160
P V C + M LS G+ L+ G+ IG +
Sbjct: 141 VNHPAVWCHKIGNMSYENGAMLEPLSVALAGLQRAGVRLGDPVLI-CGAGPIGLITMLCA 199
Query: 161 KCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA-----RVKEETGGKGVDVILD 214
K G + +T E +L K++ +V + +K E A ++ E GG V L+
Sbjct: 200 KAAGACPLVITDIDEGRLKFAKEICPEV-VTHKVERLSAEESAKKIVESFGGIEPAVALE 258
Query: 215 CMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA 254
C G S + ++ G++F+IG K E+ I + A
Sbjct: 259 CTGVESSIAAAIWAVKFGGKVFVIGV---GKNEIQIPFMRA 296
>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y93|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y99|A Chain A, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|2Y99|B Chain B, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|3ZV3|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV3|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV4|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV4|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV5|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV5|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV6|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
pdb|3ZV6|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
Length = 281
Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177
GE L+ GG+SG+G + +G RV V S E+L
Sbjct: 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERL 42
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,737,519
Number of Sequences: 62578
Number of extensions: 384210
Number of successful extensions: 1194
Number of sequences better than 100.0: 185
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 915
Number of HSP's gapped (non-prelim): 229
length of query: 274
length of database: 14,973,337
effective HSP length: 97
effective length of query: 177
effective length of database: 8,903,271
effective search space: 1575878967
effective search space used: 1575878967
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)