Query 024011
Match_columns 274
No_of_seqs 174 out of 2332
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 08:16:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024011.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024011hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 2.2E-52 4.8E-57 347.0 26.9 257 1-267 4-289 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 6.8E-50 1.5E-54 339.3 31.0 265 1-265 1-269 (326)
3 KOG1197 Predicted quinone oxid 100.0 5.8E-45 1.3E-49 284.1 23.5 250 2-252 10-259 (336)
4 KOG0023 Alcohol dehydrogenase, 100.0 7.8E-45 1.7E-49 292.9 23.8 258 2-265 11-305 (360)
5 KOG0024 Sorbitol dehydrogenase 100.0 7.6E-45 1.7E-49 293.6 22.9 264 1-271 5-305 (354)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 1.7E-42 3.8E-47 301.6 30.4 261 1-265 1-318 (371)
7 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.9E-41 6.3E-46 292.6 30.7 259 1-264 2-303 (358)
8 COG1062 AdhC Zn-dependent alco 100.0 7.6E-42 1.7E-46 278.6 25.2 258 1-265 3-312 (366)
9 cd08239 THR_DH_like L-threonin 100.0 4.5E-41 9.7E-46 289.5 30.4 257 1-265 1-288 (339)
10 PLN02740 Alcohol dehydrogenase 100.0 1.1E-40 2.5E-45 291.0 30.5 260 1-265 11-327 (381)
11 cd08291 ETR_like_1 2-enoyl thi 100.0 3.8E-40 8.3E-45 282.0 31.1 263 1-265 1-270 (324)
12 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.9E-39 4.1E-44 282.0 31.0 257 1-263 2-312 (368)
13 KOG0025 Zn2+-binding dehydroge 100.0 4E-40 8.7E-45 261.4 24.1 264 2-265 21-290 (354)
14 cd08292 ETR_like_2 2-enoyl thi 100.0 3.8E-39 8.2E-44 275.7 31.8 263 1-264 1-264 (324)
15 PLN02827 Alcohol dehydrogenase 100.0 3E-39 6.5E-44 281.4 30.8 256 1-265 13-322 (378)
16 cd08301 alcohol_DH_plants Plan 100.0 6.4E-39 1.4E-43 279.1 31.2 259 1-265 3-316 (369)
17 cd08277 liver_alcohol_DH_like 100.0 2E-38 4.2E-43 275.6 31.0 258 1-265 3-312 (365)
18 cd08300 alcohol_DH_class_III c 100.0 2.2E-38 4.8E-43 275.5 31.0 257 1-263 3-313 (368)
19 PRK09880 L-idonate 5-dehydroge 100.0 1.4E-38 3.1E-43 274.2 29.2 252 1-265 5-292 (343)
20 PLN02586 probable cinnamyl alc 100.0 1.7E-38 3.8E-43 275.0 29.0 257 1-265 11-304 (360)
21 TIGR02819 fdhA_non_GSH formald 100.0 1.1E-38 2.4E-43 278.5 27.8 234 1-241 3-302 (393)
22 cd08230 glucose_DH Glucose deh 100.0 2.4E-38 5.1E-43 274.2 28.2 254 1-265 1-301 (355)
23 cd08233 butanediol_DH_like (2R 100.0 8.7E-38 1.9E-42 270.3 30.9 258 1-265 1-298 (351)
24 TIGR02822 adh_fam_2 zinc-bindi 100.0 8.7E-38 1.9E-42 267.6 29.0 250 3-265 1-281 (329)
25 PLN02178 cinnamyl-alcohol dehy 100.0 1.2E-37 2.7E-42 270.6 29.5 256 2-265 6-299 (375)
26 COG1063 Tdh Threonine dehydrog 100.0 1.5E-37 3.3E-42 267.1 28.9 258 1-264 1-295 (350)
27 KOG0022 Alcohol dehydrogenase, 100.0 8E-38 1.7E-42 251.3 24.6 258 1-264 8-320 (375)
28 PRK10309 galactitol-1-phosphat 100.0 3.8E-37 8.2E-42 265.9 30.6 255 1-265 1-289 (347)
29 cd08295 double_bond_reductase_ 100.0 6.4E-37 1.4E-41 263.6 29.9 258 2-264 9-282 (338)
30 TIGR03201 dearomat_had 6-hydro 100.0 3.5E-37 7.7E-42 266.2 27.8 256 4-265 2-298 (349)
31 PTZ00354 alcohol dehydrogenase 100.0 1.6E-36 3.4E-41 260.4 31.6 264 1-264 2-267 (334)
32 cd08290 ETR 2-enoyl thioester 100.0 8.8E-37 1.9E-41 263.0 29.8 263 1-264 1-277 (341)
33 cd08237 ribitol-5-phosphate_DH 100.0 3E-37 6.4E-42 265.7 26.8 244 2-265 4-282 (341)
34 cd08231 MDR_TM0436_like Hypoth 100.0 2.3E-36 5E-41 262.4 31.2 260 2-265 2-308 (361)
35 cd08296 CAD_like Cinnamyl alco 100.0 2.9E-36 6.3E-41 259.0 30.9 255 1-264 1-284 (333)
36 cd08244 MDR_enoyl_red Possible 100.0 6.6E-36 1.4E-40 255.6 32.9 263 1-264 1-267 (324)
37 TIGR01202 bchC 2-desacetyl-2-h 100.0 5.9E-37 1.3E-41 260.2 25.5 242 1-265 2-257 (308)
38 PLN02514 cinnamyl-alcohol dehy 100.0 2.7E-36 5.9E-41 261.2 30.0 255 1-265 10-301 (357)
39 cd08238 sorbose_phosphate_red 100.0 2.9E-36 6.2E-41 265.5 29.6 261 1-265 3-317 (410)
40 cd05284 arabinose_DH_like D-ar 100.0 5.4E-36 1.2E-40 258.0 30.2 258 1-264 1-290 (340)
41 cd08278 benzyl_alcohol_DH Benz 100.0 7.7E-36 1.7E-40 259.3 31.1 258 1-264 3-312 (365)
42 cd05276 p53_inducible_oxidored 100.0 1.1E-35 2.3E-40 253.3 31.1 265 1-265 1-265 (323)
43 cd08294 leukotriene_B4_DH_like 100.0 9.5E-36 2.1E-40 255.3 30.6 253 1-264 3-273 (329)
44 cd08293 PTGR2 Prostaglandin re 100.0 3.7E-36 7.9E-41 259.6 27.9 226 12-240 20-256 (345)
45 cd08274 MDR9 Medium chain dehy 100.0 1E-35 2.3E-40 257.2 30.5 260 1-264 1-299 (350)
46 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.4E-35 2.9E-40 253.8 30.9 260 1-264 1-269 (325)
47 cd08297 CAD3 Cinnamyl alcohol 100.0 1.8E-35 3.8E-40 254.9 31.5 262 1-264 1-291 (341)
48 cd08289 MDR_yhfp_like Yhfp put 100.0 1.6E-35 3.4E-40 253.6 30.1 259 1-263 1-268 (326)
49 cd08246 crotonyl_coA_red croto 100.0 1.4E-35 3.1E-40 260.1 30.5 264 1-264 13-341 (393)
50 PLN03154 putative allyl alcoho 100.0 4.1E-35 8.8E-40 252.9 32.4 260 1-265 9-290 (348)
51 PRK10754 quinone oxidoreductas 100.0 2.2E-35 4.7E-40 252.9 29.9 240 1-241 2-242 (327)
52 TIGR02825 B4_12hDH leukotriene 100.0 3.4E-35 7.3E-40 251.6 29.4 242 11-263 15-268 (325)
53 cd08283 FDH_like_1 Glutathione 100.0 5.1E-35 1.1E-39 255.8 31.0 257 1-263 1-331 (386)
54 cd08285 NADP_ADH NADP(H)-depen 100.0 6.4E-35 1.4E-39 252.4 31.2 257 1-263 1-294 (351)
55 TIGR02817 adh_fam_1 zinc-bindi 100.0 3.6E-35 7.8E-40 252.4 29.1 253 2-261 1-266 (336)
56 cd08299 alcohol_DH_class_I_II_ 100.0 6.3E-35 1.4E-39 254.1 30.7 257 1-264 8-318 (373)
57 cd08263 Zn_ADH10 Alcohol dehyd 100.0 7.8E-35 1.7E-39 253.3 30.8 258 1-263 1-313 (367)
58 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.2E-34 2.5E-39 246.1 30.9 261 1-266 1-292 (306)
59 cd08250 Mgc45594_like Mgc45594 100.0 1.5E-34 3.2E-39 248.0 31.6 258 1-263 2-271 (329)
60 cd08286 FDH_like_ADH2 formalde 100.0 1.4E-34 3E-39 249.7 30.9 257 1-263 1-290 (345)
61 TIGR02823 oxido_YhdH putative 100.0 1.3E-34 2.9E-39 247.6 30.4 258 2-264 1-267 (323)
62 cd05278 FDH_like Formaldehyde 100.0 9.2E-35 2E-39 251.0 29.3 257 1-263 1-292 (347)
63 cd05282 ETR_like 2-enoyl thioe 100.0 1.3E-34 2.8E-39 247.6 29.9 260 6-265 3-264 (323)
64 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.8E-34 4E-39 249.0 31.1 259 1-264 1-292 (345)
65 cd08276 MDR7 Medium chain dehy 100.0 3.9E-34 8.4E-39 245.7 32.7 263 1-264 1-285 (336)
66 PRK10083 putative oxidoreducta 100.0 2.1E-34 4.6E-39 248.0 30.3 253 1-263 1-283 (339)
67 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.3E-34 5.1E-39 248.8 30.2 260 1-265 1-300 (350)
68 cd08253 zeta_crystallin Zeta-c 100.0 4.2E-34 9E-39 243.9 31.1 262 1-263 1-267 (325)
69 cd08279 Zn_ADH_class_III Class 100.0 3.9E-34 8.5E-39 248.5 31.2 257 1-262 1-307 (363)
70 TIGR01751 crot-CoA-red crotony 100.0 3.2E-34 6.9E-39 251.9 30.3 263 1-263 8-335 (398)
71 cd08266 Zn_ADH_like1 Alcohol d 100.0 6.9E-34 1.5E-38 244.5 31.8 264 1-264 1-291 (342)
72 cd08256 Zn_ADH2 Alcohol dehydr 100.0 6.8E-34 1.5E-38 245.9 31.1 256 1-263 1-299 (350)
73 cd05279 Zn_ADH1 Liver alcohol 100.0 6E-34 1.3E-38 247.4 30.3 256 2-264 2-311 (365)
74 cd08270 MDR4 Medium chain dehy 100.0 7E-34 1.5E-38 241.2 30.1 249 1-265 1-251 (305)
75 cd08235 iditol_2_DH_like L-idi 100.0 1.1E-33 2.3E-38 244.0 31.6 256 1-263 1-291 (343)
76 PRK09422 ethanol-active dehydr 100.0 6.1E-34 1.3E-38 245.0 30.0 254 1-263 1-285 (338)
77 TIGR02824 quinone_pig3 putativ 100.0 1.2E-33 2.5E-38 241.3 31.4 264 1-264 1-264 (325)
78 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.3E-33 2.8E-38 243.0 31.4 253 1-262 1-281 (337)
79 cd08284 FDH_like_2 Glutathione 100.0 1.3E-33 2.9E-38 243.5 30.9 254 1-262 1-290 (344)
80 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.3E-33 2.9E-38 242.7 30.7 260 1-264 1-288 (338)
81 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.9E-33 4.2E-38 241.1 30.7 254 1-263 1-281 (332)
82 cd08243 quinone_oxidoreductase 100.0 2.2E-33 4.8E-38 239.3 30.4 235 1-241 1-241 (320)
83 cd08249 enoyl_reductase_like e 100.0 3.5E-34 7.5E-39 246.7 25.4 237 1-242 1-258 (339)
84 cd08252 AL_MDR Arginate lyase 100.0 2.5E-33 5.5E-38 240.9 30.3 257 1-263 1-270 (336)
85 cd08236 sugar_DH NAD(P)-depend 100.0 3.7E-33 7.9E-38 240.7 30.7 255 1-264 1-286 (343)
86 PRK13771 putative alcohol dehy 100.0 1.9E-33 4.2E-38 241.6 28.3 253 1-263 1-281 (334)
87 cd08272 MDR6 Medium chain dehy 100.0 5.9E-33 1.3E-37 237.1 30.7 257 1-263 1-262 (326)
88 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.7E-33 5.8E-38 239.8 28.6 251 1-263 1-278 (325)
89 cd08268 MDR2 Medium chain dehy 100.0 9.1E-33 2E-37 236.1 31.5 263 1-263 1-268 (328)
90 cd05283 CAD1 Cinnamyl alcohol 100.0 3.7E-33 7.9E-38 240.1 28.8 253 2-265 1-289 (337)
91 PRK05396 tdh L-threonine 3-deh 100.0 6E-33 1.3E-37 239.2 29.9 256 1-263 1-287 (341)
92 cd08282 PFDH_like Pseudomonas 100.0 9.5E-33 2.1E-37 240.7 30.9 254 1-263 1-322 (375)
93 cd08288 MDR_yhdh Yhdh putative 100.0 1E-32 2.2E-37 236.0 30.6 258 1-263 1-267 (324)
94 cd08262 Zn_ADH8 Alcohol dehydr 100.0 9E-33 2E-37 238.1 30.4 255 1-263 1-288 (341)
95 cd05286 QOR2 Quinone oxidoredu 100.0 1.7E-32 3.7E-37 233.4 31.4 259 2-262 1-259 (320)
96 cd08234 threonine_DH_like L-th 100.0 1.3E-32 2.9E-37 236.3 30.3 253 1-263 1-283 (334)
97 cd05285 sorbitol_DH Sorbitol d 100.0 1.8E-32 3.9E-37 236.4 29.2 254 3-263 1-289 (343)
98 cd08287 FDH_like_ADH3 formalde 100.0 3E-32 6.5E-37 235.2 30.1 255 1-263 1-292 (345)
99 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.5E-32 7.6E-37 237.9 30.7 247 15-264 39-332 (384)
100 cd08248 RTN4I1 Human Reticulon 100.0 9.5E-33 2.1E-37 238.7 26.7 236 1-240 1-259 (350)
101 cd08241 QOR1 Quinone oxidoredu 100.0 8.9E-32 1.9E-36 229.3 31.5 263 1-264 1-264 (323)
102 KOG1198 Zinc-binding oxidoredu 100.0 1.5E-32 3.3E-37 233.5 24.5 239 4-243 9-260 (347)
103 cd08273 MDR8 Medium chain dehy 100.0 7.4E-32 1.6E-36 231.3 28.4 237 1-242 1-237 (331)
104 cd08271 MDR5 Medium chain dehy 100.0 1.3E-31 2.8E-36 228.9 29.5 239 1-241 1-242 (325)
105 cd05288 PGDH Prostaglandin deh 100.0 2.1E-31 4.6E-36 228.4 30.5 257 2-264 3-275 (329)
106 PLN02702 L-idonate 5-dehydroge 100.0 2.3E-31 4.9E-36 231.3 30.8 257 1-264 18-310 (364)
107 cd08242 MDR_like Medium chain 100.0 1E-31 2.2E-36 229.5 28.0 240 1-263 1-269 (319)
108 cd08298 CAD2 Cinnamyl alcohol 100.0 1.8E-31 3.8E-36 228.9 29.5 249 1-263 1-280 (329)
109 cd05188 MDR Medium chain reduc 100.0 9.6E-32 2.1E-36 223.8 27.0 237 29-267 1-261 (271)
110 cd08245 CAD Cinnamyl alcohol d 100.0 3.1E-31 6.8E-36 227.5 28.9 253 2-264 1-282 (330)
111 COG2130 Putative NADP-dependen 100.0 1.5E-31 3.3E-36 214.6 24.9 244 13-265 25-282 (340)
112 cd05281 TDH Threonine dehydrog 100.0 4.8E-31 1E-35 227.4 29.6 255 1-263 1-287 (341)
113 cd08247 AST1_like AST1 is a cy 100.0 3.4E-31 7.3E-36 229.3 28.7 237 1-238 1-259 (352)
114 TIGR00692 tdh L-threonine 3-de 100.0 4.7E-31 1E-35 227.3 29.0 250 7-263 5-286 (340)
115 cd08269 Zn_ADH9 Alcohol dehydr 100.0 6.2E-31 1.3E-35 223.7 29.1 246 13-263 5-254 (312)
116 cd08232 idonate-5-DH L-idonate 100.0 8.7E-31 1.9E-35 225.5 28.9 248 5-263 2-286 (339)
117 cd05289 MDR_like_2 alcohol deh 100.0 2E-30 4.4E-35 219.7 28.3 236 1-241 1-241 (309)
118 cd08275 MDR3 Medium chain dehy 100.0 7E-30 1.5E-34 219.3 31.5 260 2-263 1-277 (337)
119 cd08251 polyketide_synthase po 100.0 4.6E-30 1E-34 217.1 29.0 219 22-241 2-222 (303)
120 TIGR03366 HpnZ_proposed putati 100.0 9.9E-31 2.1E-35 219.3 22.4 202 60-265 1-246 (280)
121 cd08267 MDR1 Medium chain dehy 100.0 3E-29 6.5E-34 213.8 26.0 233 5-241 2-243 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 1.8E-28 3.9E-33 205.8 26.9 210 28-241 1-212 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 1.4E-27 3E-32 200.2 26.0 205 32-241 2-208 (288)
124 KOG1196 Predicted NAD-dependen 99.9 5.4E-25 1.2E-29 176.4 24.6 239 23-267 33-287 (343)
125 cd08255 2-desacetyl-2-hydroxye 99.9 2.8E-23 6.1E-28 173.9 21.7 194 56-264 19-215 (277)
126 KOG1202 Animal-type fatty acid 99.9 6.8E-24 1.5E-28 194.3 15.0 244 10-264 1424-1681(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.8 5.8E-19 1.3E-23 126.8 9.1 82 27-108 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 4.7E-17 1E-21 120.7 12.4 117 151-267 1-118 (130)
129 PRK09424 pntA NAD(P) transhydr 99.3 5.5E-11 1.2E-15 105.9 14.4 129 137-266 162-316 (509)
130 COG4221 Short-chain alcohol de 99.2 3.2E-12 7E-17 101.4 3.1 78 139-218 5-91 (246)
131 COG0300 DltE Short-chain dehyd 99.1 1.4E-09 3E-14 88.8 9.8 81 138-218 4-94 (265)
132 cd00401 AdoHcyase S-adenosyl-L 99.0 1.7E-08 3.6E-13 88.0 15.1 122 128-265 189-313 (413)
133 KOG1205 Predicted dehydrogenas 99.0 6.5E-10 1.4E-14 91.4 5.3 78 139-218 11-101 (282)
134 COG3967 DltE Short-chain dehyd 98.8 3.4E-08 7.4E-13 76.3 8.7 78 139-218 4-88 (245)
135 KOG1201 Hydroxysteroid 17-beta 98.7 3.9E-09 8.5E-14 86.3 1.2 78 139-218 37-124 (300)
136 PRK08324 short chain dehydroge 98.6 1.4E-07 3.1E-12 88.6 9.6 114 93-217 386-507 (681)
137 PRK05993 short chain dehydroge 98.6 1.8E-07 3.9E-12 78.4 9.3 80 139-218 3-86 (277)
138 KOG1209 1-Acyl dihydroxyaceton 98.6 1.2E-07 2.6E-12 73.7 6.4 80 139-219 6-92 (289)
139 PRK12742 oxidoreductase; Provi 98.6 1.2E-06 2.7E-11 71.3 12.4 78 139-218 5-85 (237)
140 PRK06505 enoyl-(acyl carrier p 98.6 1.1E-06 2.4E-11 73.3 11.7 78 139-218 6-95 (271)
141 PRK06079 enoyl-(acyl carrier p 98.5 8E-07 1.7E-11 73.4 10.1 78 139-218 6-93 (252)
142 PRK08306 dipicolinate synthase 98.5 1.1E-05 2.3E-10 68.1 16.8 114 139-265 151-265 (296)
143 PRK08339 short chain dehydroge 98.5 9.5E-07 2.1E-11 73.4 10.3 80 139-218 7-95 (263)
144 TIGR00561 pntA NAD(P) transhyd 98.5 1.8E-06 4E-11 77.1 12.1 127 138-265 162-314 (511)
145 KOG1014 17 beta-hydroxysteroid 98.5 9.4E-07 2E-11 72.9 9.1 82 138-219 47-137 (312)
146 PRK05693 short chain dehydroge 98.5 3.2E-06 7E-11 70.6 12.5 78 141-218 2-82 (274)
147 PRK08265 short chain dehydroge 98.5 2E-06 4.3E-11 71.4 10.7 78 139-218 5-90 (261)
148 PRK08415 enoyl-(acyl carrier p 98.4 3.5E-06 7.5E-11 70.5 12.1 80 139-218 4-93 (274)
149 PRK06182 short chain dehydroge 98.4 3.7E-06 8E-11 70.2 11.9 80 139-218 2-84 (273)
150 PRK06603 enoyl-(acyl carrier p 98.4 4.4E-06 9.6E-11 69.3 11.8 80 139-218 7-96 (260)
151 PRK07533 enoyl-(acyl carrier p 98.4 3.9E-06 8.5E-11 69.5 11.4 78 139-218 9-98 (258)
152 PRK06398 aldose dehydrogenase; 98.4 4.1E-07 8.9E-12 75.3 5.2 76 139-218 5-82 (258)
153 PRK08594 enoyl-(acyl carrier p 98.4 2.3E-06 5.1E-11 70.8 9.5 80 139-218 6-97 (257)
154 PRK06128 oxidoreductase; Provi 98.4 4.8E-06 1E-10 70.6 10.9 78 139-218 54-144 (300)
155 PRK06484 short chain dehydroge 98.4 3.4E-06 7.5E-11 77.0 10.8 79 138-218 267-353 (520)
156 PRK07984 enoyl-(acyl carrier p 98.3 4.3E-06 9.4E-11 69.4 10.3 80 139-218 5-94 (262)
157 PRK05476 S-adenosyl-L-homocyst 98.3 1.3E-05 2.8E-10 70.4 13.4 104 125-241 196-302 (425)
158 PRK07370 enoyl-(acyl carrier p 98.3 5.7E-06 1.2E-10 68.5 10.4 78 139-218 5-97 (258)
159 PRK05786 fabG 3-ketoacyl-(acyl 98.3 1.1E-05 2.3E-10 65.8 11.5 103 139-241 4-138 (238)
160 PRK06484 short chain dehydroge 98.3 7E-06 1.5E-10 75.0 11.0 78 139-218 4-89 (520)
161 KOG1610 Corticosteroid 11-beta 98.3 1.6E-05 3.4E-10 65.8 11.7 81 137-217 26-115 (322)
162 KOG1207 Diacetyl reductase/L-x 98.3 5.8E-06 1.3E-10 62.4 8.3 81 139-220 6-89 (245)
163 KOG1200 Mitochondrial/plastidi 98.3 2.1E-07 4.4E-12 71.4 0.6 78 140-219 14-101 (256)
164 PLN02780 ketoreductase/ oxidor 98.3 5.7E-06 1.2E-10 70.8 9.3 80 139-218 52-142 (320)
165 PRK06139 short chain dehydroge 98.3 6.1E-06 1.3E-10 70.9 9.4 80 139-218 6-94 (330)
166 PRK07109 short chain dehydroge 98.2 1.3E-05 2.8E-10 69.1 11.2 78 139-218 7-95 (334)
167 PRK12747 short chain dehydroge 98.2 5.5E-06 1.2E-10 68.2 8.4 104 139-242 3-148 (252)
168 KOG0725 Reductases with broad 98.2 4.4E-06 9.6E-11 69.4 7.7 81 138-218 6-99 (270)
169 PLN03209 translocon at the inn 98.2 1.8E-05 3.8E-10 71.7 11.9 107 133-242 73-211 (576)
170 PRK05872 short chain dehydroge 98.2 3.4E-06 7.5E-11 71.3 7.1 78 139-218 8-95 (296)
171 PRK07985 oxidoreductase; Provi 98.2 7.3E-06 1.6E-10 69.3 8.9 78 139-218 48-138 (294)
172 PRK08177 short chain dehydroge 98.2 1.1E-05 2.4E-10 65.3 9.4 78 141-218 2-81 (225)
173 PRK07806 short chain dehydroge 98.2 3.3E-05 7.3E-10 63.3 12.0 102 139-240 5-136 (248)
174 KOG4169 15-hydroxyprostaglandi 98.2 2.1E-06 4.5E-11 67.7 4.3 77 140-218 5-93 (261)
175 TIGR03325 BphB_TodD cis-2,3-di 98.2 1.6E-05 3.5E-10 65.9 9.9 78 139-218 4-89 (262)
176 PRK07060 short chain dehydroge 98.2 2.4E-05 5.1E-10 64.0 10.6 78 139-218 8-87 (245)
177 PF13460 NAD_binding_10: NADH( 98.2 5.2E-05 1.1E-09 59.2 12.1 93 143-241 1-100 (183)
178 PRK06200 2,3-dihydroxy-2,3-dih 98.2 1.8E-05 4E-10 65.6 9.9 78 139-218 5-90 (263)
179 PRK06196 oxidoreductase; Provi 98.1 1.3E-05 2.9E-10 68.3 9.1 80 139-218 25-109 (315)
180 KOG1199 Short-chain alcohol de 98.1 2.4E-05 5.2E-10 59.0 9.2 81 139-219 8-94 (260)
181 PRK12937 short chain dehydroge 98.1 3.8E-05 8.2E-10 62.8 11.1 78 139-218 4-93 (245)
182 PLN02494 adenosylhomocysteinas 98.1 5.8E-05 1.3E-09 66.7 12.6 101 128-241 241-344 (477)
183 PRK05866 short chain dehydroge 98.1 1.1E-05 2.4E-10 68.1 7.8 80 139-218 39-127 (293)
184 PRK12939 short chain dehydroge 98.1 5.3E-05 1.1E-09 62.1 11.6 80 139-218 6-94 (250)
185 PRK05854 short chain dehydroge 98.1 2.2E-05 4.7E-10 67.0 9.4 80 139-218 13-103 (313)
186 PRK12367 short chain dehydroge 98.1 3.3E-05 7.1E-10 63.5 10.0 74 139-218 13-89 (245)
187 PRK06953 short chain dehydroge 98.1 3.3E-05 7.2E-10 62.3 9.9 78 141-218 2-80 (222)
188 PLN02730 enoyl-[acyl-carrier-p 98.1 4.5E-05 9.8E-10 64.6 11.0 40 139-179 8-49 (303)
189 PRK06077 fabG 3-ketoacyl-(acyl 98.1 4E-05 8.7E-10 63.0 10.4 102 139-242 5-144 (252)
190 PRK05867 short chain dehydroge 98.1 3.3E-05 7.1E-10 63.7 9.8 78 139-218 8-96 (253)
191 PRK07825 short chain dehydroge 98.1 2.2E-05 4.8E-10 65.5 8.7 77 140-218 5-88 (273)
192 TIGR02853 spore_dpaA dipicolin 98.1 0.00015 3.3E-09 60.8 13.6 109 139-260 150-259 (287)
193 TIGR00936 ahcY adenosylhomocys 98.1 9.9E-05 2.1E-09 64.5 12.8 102 127-241 181-285 (406)
194 PRK06180 short chain dehydroge 98.0 2.8E-05 6.1E-10 65.1 9.0 80 139-218 3-88 (277)
195 PRK08862 short chain dehydroge 98.0 1.9E-05 4.2E-10 64.1 7.8 78 139-217 4-92 (227)
196 PRK07062 short chain dehydroge 98.0 2E-05 4.4E-10 65.3 8.0 78 139-218 7-97 (265)
197 PRK07832 short chain dehydroge 98.0 9.7E-05 2.1E-09 61.6 12.0 78 141-218 1-88 (272)
198 PRK07063 short chain dehydroge 98.0 2.5E-05 5.4E-10 64.6 8.3 78 139-218 6-96 (260)
199 PRK06057 short chain dehydroge 98.0 5.2E-05 1.1E-09 62.5 10.1 80 139-218 6-89 (255)
200 PRK07478 short chain dehydroge 98.0 2.3E-05 5E-10 64.6 8.0 78 139-218 5-93 (254)
201 KOG1210 Predicted 3-ketosphing 98.0 7.5E-05 1.6E-09 61.9 10.6 83 136-218 29-122 (331)
202 TIGR00518 alaDH alanine dehydr 98.0 0.00015 3.2E-09 63.2 13.1 120 140-265 167-300 (370)
203 PRK07831 short chain dehydroge 98.0 4.1E-05 8.8E-10 63.5 9.3 82 137-218 14-107 (262)
204 PRK12481 2-deoxy-D-gluconate 3 98.0 4.2E-05 9.1E-10 63.0 9.2 80 139-218 7-93 (251)
205 PRK07904 short chain dehydroge 98.0 5E-05 1.1E-09 62.7 9.7 82 137-218 5-97 (253)
206 PRK12829 short chain dehydroge 98.0 3.6E-05 7.9E-10 63.7 8.9 81 136-218 7-96 (264)
207 PRK08017 oxidoreductase; Provi 98.0 4.5E-05 9.8E-10 62.8 9.3 77 141-218 3-84 (256)
208 TIGR01832 kduD 2-deoxy-D-gluco 98.0 5.3E-05 1.2E-09 62.1 9.6 80 139-218 4-90 (248)
209 PF01488 Shikimate_DH: Shikima 98.0 3E-05 6.5E-10 57.6 7.3 94 139-241 11-112 (135)
210 PRK06720 hypothetical protein; 98.0 9.8E-05 2.1E-09 57.0 10.4 79 139-219 15-104 (169)
211 PRK08589 short chain dehydroge 98.0 3.5E-05 7.7E-10 64.3 8.6 77 139-218 5-92 (272)
212 PRK07453 protochlorophyllide o 98.0 3.2E-05 6.9E-10 66.2 8.5 79 139-217 5-92 (322)
213 PRK05876 short chain dehydroge 98.0 4.4E-05 9.6E-10 63.9 9.1 78 139-218 5-93 (275)
214 PRK06194 hypothetical protein; 98.0 5.1E-05 1.1E-09 63.7 9.5 80 139-218 5-93 (287)
215 PRK08261 fabG 3-ketoacyl-(acyl 98.0 9.4E-05 2E-09 66.4 11.7 80 139-218 209-294 (450)
216 PRK08690 enoyl-(acyl carrier p 98.0 6.4E-05 1.4E-09 62.3 9.8 78 139-218 5-94 (261)
217 PRK07814 short chain dehydroge 98.0 4.6E-05 1E-09 63.2 9.0 80 139-218 9-97 (263)
218 KOG1208 Dehydrogenases with di 98.0 3.6E-05 7.8E-10 65.2 8.3 79 138-218 33-124 (314)
219 PRK06841 short chain dehydroge 98.0 4.4E-05 9.6E-10 62.9 8.7 78 139-218 14-99 (255)
220 PRK08220 2,3-dihydroxybenzoate 98.0 8.1E-05 1.8E-09 61.2 10.2 75 139-218 7-86 (252)
221 PRK07024 short chain dehydroge 98.0 4.6E-05 1E-09 63.0 8.7 79 140-218 2-88 (257)
222 PRK07890 short chain dehydroge 98.0 6.2E-05 1.4E-09 62.1 9.5 78 139-218 4-92 (258)
223 PRK08303 short chain dehydroge 97.9 7.8E-05 1.7E-09 63.4 10.0 36 139-174 7-42 (305)
224 PRK06125 short chain dehydroge 97.9 7.3E-05 1.6E-09 61.8 9.6 78 139-218 6-91 (259)
225 PRK07677 short chain dehydroge 97.9 7.6E-05 1.6E-09 61.5 9.6 79 140-218 1-88 (252)
226 PRK08217 fabG 3-ketoacyl-(acyl 97.9 4.5E-05 9.7E-10 62.6 8.2 80 139-218 4-92 (253)
227 PRK09291 short chain dehydroge 97.9 8.9E-05 1.9E-09 61.1 10.0 75 140-218 2-83 (257)
228 PRK07523 gluconate 5-dehydroge 97.9 4.7E-05 1E-09 62.8 8.3 80 139-218 9-97 (255)
229 PRK06483 dihydromonapterin red 97.9 7.2E-05 1.6E-09 60.9 9.3 79 140-218 2-84 (236)
230 PRK06500 short chain dehydroge 97.9 7.6E-05 1.7E-09 61.2 9.4 78 139-218 5-90 (249)
231 PRK06949 short chain dehydroge 97.9 8.7E-05 1.9E-09 61.2 9.8 81 138-218 7-96 (258)
232 PRK08159 enoyl-(acyl carrier p 97.9 8.4E-05 1.8E-09 62.1 9.7 81 138-218 8-98 (272)
233 PRK07231 fabG 3-ketoacyl-(acyl 97.9 5.8E-05 1.3E-09 61.9 8.6 80 139-218 4-91 (251)
234 PRK07576 short chain dehydroge 97.9 9.1E-05 2E-09 61.5 9.8 79 139-217 8-95 (264)
235 PRK05884 short chain dehydroge 97.9 8.7E-05 1.9E-09 60.0 9.3 75 142-217 2-78 (223)
236 PRK07424 bifunctional sterol d 97.9 9.8E-05 2.1E-09 64.9 10.1 75 139-218 177-255 (406)
237 PRK06181 short chain dehydroge 97.9 0.00012 2.6E-09 60.7 10.3 79 140-218 1-88 (263)
238 PRK09186 flagellin modificatio 97.9 8.4E-05 1.8E-09 61.2 9.3 79 139-217 3-92 (256)
239 PRK06701 short chain dehydroge 97.9 0.00021 4.5E-09 60.3 11.8 79 138-218 44-134 (290)
240 PRK06101 short chain dehydroge 97.9 0.0001 2.2E-09 60.3 9.6 77 141-218 2-81 (240)
241 PRK08267 short chain dehydroge 97.9 6.1E-05 1.3E-09 62.3 8.4 78 141-218 2-87 (260)
242 PRK07791 short chain dehydroge 97.9 0.00011 2.5E-09 61.8 10.1 79 138-218 4-102 (286)
243 PRK09072 short chain dehydroge 97.9 8.4E-05 1.8E-09 61.6 9.2 80 139-218 4-90 (263)
244 PRK08628 short chain dehydroge 97.9 8.4E-05 1.8E-09 61.4 9.1 80 139-218 6-93 (258)
245 PRK08340 glucose-1-dehydrogena 97.9 0.00012 2.6E-09 60.5 10.1 77 142-218 2-86 (259)
246 PRK12823 benD 1,6-dihydroxycyc 97.9 7.5E-05 1.6E-09 61.7 8.8 78 139-218 7-94 (260)
247 PRK13394 3-hydroxybutyrate deh 97.9 0.00011 2.3E-09 60.8 9.7 78 139-218 6-94 (262)
248 PRK08643 acetoin reductase; Va 97.9 3.6E-05 7.8E-10 63.5 6.8 77 140-218 2-89 (256)
249 PRK06114 short chain dehydroge 97.9 0.00011 2.4E-09 60.6 9.5 78 139-218 7-96 (254)
250 PLN02253 xanthoxin dehydrogena 97.9 7.1E-05 1.5E-09 62.7 8.4 78 139-218 17-104 (280)
251 PRK06138 short chain dehydroge 97.9 5.5E-05 1.2E-09 62.1 7.6 80 139-218 4-91 (252)
252 PRK07035 short chain dehydroge 97.9 4.2E-05 9E-10 63.0 6.9 78 139-218 7-95 (252)
253 PRK06172 short chain dehydroge 97.9 0.0001 2.2E-09 60.7 9.1 78 139-218 6-94 (253)
254 PRK05717 oxidoreductase; Valid 97.9 0.00019 4.2E-09 59.2 10.8 78 139-218 9-94 (255)
255 PRK06179 short chain dehydroge 97.9 4.1E-05 8.9E-10 63.7 6.8 78 139-218 3-83 (270)
256 PRK06197 short chain dehydroge 97.9 6.2E-05 1.3E-09 64.0 7.9 80 139-218 15-105 (306)
257 PRK08264 short chain dehydroge 97.9 7.4E-05 1.6E-09 60.9 8.0 75 139-218 5-83 (238)
258 PRK00517 prmA ribosomal protei 97.8 0.00059 1.3E-08 56.2 13.2 143 77-241 65-216 (250)
259 PRK08213 gluconate 5-dehydroge 97.8 0.00011 2.3E-09 60.8 8.9 78 139-218 11-99 (259)
260 PRK12828 short chain dehydroge 97.8 0.00011 2.3E-09 59.7 8.8 78 139-218 6-92 (239)
261 PRK08085 gluconate 5-dehydroge 97.8 0.00014 3E-09 59.9 9.6 80 139-218 8-96 (254)
262 PRK08993 2-deoxy-D-gluconate 3 97.8 0.00014 2.9E-09 60.0 9.5 78 139-218 9-95 (253)
263 PF00106 adh_short: short chai 97.8 0.00011 2.4E-09 56.3 8.4 78 141-218 1-90 (167)
264 PRK07067 sorbitol dehydrogenas 97.8 0.00014 3.1E-09 60.0 9.6 80 139-218 5-90 (257)
265 PRK07774 short chain dehydroge 97.8 0.00014 3E-09 59.7 9.4 78 139-218 5-93 (250)
266 PRK08251 short chain dehydroge 97.8 0.00013 2.8E-09 59.9 9.2 79 140-218 2-91 (248)
267 PRK07889 enoyl-(acyl carrier p 97.8 9.8E-05 2.1E-09 61.1 8.3 80 139-218 6-95 (256)
268 PRK09242 tropinone reductase; 97.8 7.8E-05 1.7E-09 61.5 7.7 78 139-218 8-98 (257)
269 PRK06124 gluconate 5-dehydroge 97.8 0.00011 2.3E-09 60.7 8.4 78 139-218 10-98 (256)
270 PRK08277 D-mannonate oxidoredu 97.8 0.00015 3.3E-09 60.6 9.5 77 139-217 9-96 (278)
271 cd05213 NAD_bind_Glutamyl_tRNA 97.8 0.00019 4.2E-09 61.1 9.9 108 103-221 139-251 (311)
272 PRK07856 short chain dehydroge 97.8 9.6E-05 2.1E-09 60.8 7.8 74 139-218 5-85 (252)
273 TIGR01289 LPOR light-dependent 97.8 0.00012 2.6E-09 62.4 8.7 79 140-218 3-91 (314)
274 PRK06198 short chain dehydroge 97.8 0.00012 2.5E-09 60.6 8.3 80 139-218 5-94 (260)
275 PRK07454 short chain dehydroge 97.8 0.00025 5.4E-09 57.9 10.1 81 138-218 4-93 (241)
276 PRK08703 short chain dehydroge 97.8 0.0002 4.4E-09 58.4 9.5 79 139-218 5-97 (239)
277 PRK10538 malonic semialdehyde 97.8 0.00013 2.9E-09 59.9 8.5 78 141-218 1-84 (248)
278 PRK06482 short chain dehydroge 97.8 0.0002 4.3E-09 59.8 9.6 78 141-218 3-86 (276)
279 PRK06935 2-deoxy-D-gluconate 3 97.8 0.00017 3.7E-09 59.5 9.2 77 139-218 14-101 (258)
280 PRK08226 short chain dehydroge 97.8 0.00019 4.2E-09 59.4 9.4 78 139-218 5-92 (263)
281 PRK08263 short chain dehydroge 97.8 0.00021 4.6E-09 59.6 9.6 77 140-218 3-87 (275)
282 PRK06463 fabG 3-ketoacyl-(acyl 97.8 0.00016 3.6E-09 59.6 8.8 80 139-218 6-89 (255)
283 PRK12384 sorbitol-6-phosphate 97.8 0.00032 7E-09 57.9 10.5 77 140-218 2-91 (259)
284 PRK08278 short chain dehydroge 97.8 0.00015 3.3E-09 60.5 8.7 78 139-218 5-100 (273)
285 PTZ00075 Adenosylhomocysteinas 97.8 0.00062 1.3E-08 60.4 12.6 92 137-241 251-344 (476)
286 PRK07097 gluconate 5-dehydroge 97.8 0.00022 4.7E-09 59.2 9.5 78 139-218 9-97 (265)
287 PRK05650 short chain dehydroge 97.8 0.00021 4.6E-09 59.5 9.4 78 141-218 1-87 (270)
288 PRK07326 short chain dehydroge 97.7 0.00014 3.1E-09 59.1 8.2 80 139-218 5-92 (237)
289 PRK12826 3-ketoacyl-(acyl-carr 97.7 0.00019 4.1E-09 58.8 8.9 78 139-218 5-93 (251)
290 PRK07792 fabG 3-ketoacyl-(acyl 97.7 0.00022 4.9E-09 60.6 9.5 80 139-218 11-99 (306)
291 COG2518 Pcm Protein-L-isoaspar 97.7 0.0004 8.7E-09 54.7 10.0 113 118-239 53-170 (209)
292 PRK05653 fabG 3-ketoacyl-(acyl 97.7 0.00026 5.6E-09 57.7 9.5 78 139-218 4-92 (246)
293 PRK12771 putative glutamate sy 97.7 5.4E-05 1.2E-09 69.9 6.0 78 136-219 133-233 (564)
294 TIGR02632 RhaD_aldol-ADH rhamn 97.7 0.00017 3.7E-09 67.9 9.3 114 94-218 379-503 (676)
295 COG1748 LYS9 Saccharopine dehy 97.7 0.00075 1.6E-08 58.5 12.4 97 141-243 2-104 (389)
296 PRK06523 short chain dehydroge 97.7 8.9E-05 1.9E-09 61.3 6.5 73 139-218 8-87 (260)
297 PRK05875 short chain dehydroge 97.7 0.00022 4.7E-09 59.5 8.9 80 139-218 6-96 (276)
298 PRK12936 3-ketoacyl-(acyl-carr 97.7 0.0003 6.4E-09 57.5 9.5 78 139-218 5-90 (245)
299 PRK12743 oxidoreductase; Provi 97.7 0.00028 6E-09 58.3 9.4 77 140-218 2-90 (256)
300 PRK06997 enoyl-(acyl carrier p 97.7 0.00028 6E-09 58.5 9.3 78 139-218 5-94 (260)
301 PRK12429 3-hydroxybutyrate deh 97.7 0.00015 3.2E-09 59.8 7.5 80 139-218 3-91 (258)
302 PRK05599 hypothetical protein; 97.7 0.0002 4.4E-09 58.8 8.2 75 141-218 1-87 (246)
303 PRK07074 short chain dehydroge 97.7 0.00035 7.6E-09 57.6 9.6 79 140-218 2-87 (257)
304 PRK06940 short chain dehydroge 97.7 0.00048 1E-08 57.6 10.5 77 140-218 2-86 (275)
305 PRK08416 7-alpha-hydroxysteroi 97.7 0.00011 2.4E-09 60.8 6.6 79 139-217 7-96 (260)
306 CHL00194 ycf39 Ycf39; Provisio 97.7 0.00046 9.9E-09 59.0 10.4 94 142-240 2-111 (317)
307 PRK07666 fabG 3-ketoacyl-(acyl 97.7 0.00039 8.4E-09 56.7 9.6 80 139-218 6-94 (239)
308 PRK06113 7-alpha-hydroxysteroi 97.7 0.00037 8.1E-09 57.4 9.4 78 139-218 10-98 (255)
309 TIGR03206 benzo_BadH 2-hydroxy 97.7 0.00038 8.2E-09 57.0 9.4 80 139-218 2-90 (250)
310 PRK07102 short chain dehydroge 97.7 0.00031 6.8E-09 57.4 8.8 77 141-218 2-86 (243)
311 PRK06914 short chain dehydroge 97.7 0.00059 1.3E-08 57.1 10.6 80 139-218 2-91 (280)
312 PRK07578 short chain dehydroge 97.6 0.0007 1.5E-08 53.6 10.5 64 142-218 2-65 (199)
313 PRK12938 acetyacetyl-CoA reduc 97.6 0.00029 6.2E-09 57.7 8.2 78 139-218 2-91 (246)
314 PRK08063 enoyl-(acyl carrier p 97.6 0.00045 9.8E-09 56.6 9.2 78 139-218 3-92 (250)
315 COG2230 Cfa Cyclopropane fatty 97.6 0.00051 1.1E-08 56.8 9.3 118 110-241 49-179 (283)
316 PRK07577 short chain dehydroge 97.6 0.00031 6.8E-09 57.0 8.2 75 139-218 2-78 (234)
317 PRK06171 sorbitol-6-phosphate 97.6 6.3E-05 1.4E-09 62.4 3.9 75 139-218 8-87 (266)
318 cd01078 NAD_bind_H4MPT_DH NADP 97.6 0.0018 3.8E-08 51.2 11.8 77 139-220 27-109 (194)
319 PRK08945 putative oxoacyl-(acy 97.6 0.00085 1.8E-08 55.0 10.4 80 137-218 9-102 (247)
320 PRK11873 arsM arsenite S-adeno 97.6 0.00027 5.8E-09 59.0 7.4 101 135-241 73-186 (272)
321 PLN00141 Tic62-NAD(P)-related 97.6 0.00067 1.5E-08 55.9 9.6 100 139-241 16-134 (251)
322 PRK07775 short chain dehydroge 97.6 0.00073 1.6E-08 56.4 9.8 80 139-218 9-97 (274)
323 PRK06550 fabG 3-ketoacyl-(acyl 97.5 0.00049 1.1E-08 55.9 8.3 72 139-217 4-76 (235)
324 PRK08219 short chain dehydroge 97.5 0.0012 2.5E-08 53.2 10.4 76 140-218 3-81 (227)
325 TIGR01963 PHB_DH 3-hydroxybuty 97.5 0.00091 2E-08 54.9 9.9 77 140-218 1-88 (255)
326 COG2910 Putative NADH-flavin r 97.5 0.0005 1.1E-08 52.7 7.4 94 142-241 2-107 (211)
327 TIGR02622 CDP_4_6_dhtase CDP-g 97.5 0.0006 1.3E-08 59.0 9.1 77 139-218 3-85 (349)
328 TIGR02415 23BDH acetoin reduct 97.5 0.00064 1.4E-08 55.9 8.9 78 141-218 1-87 (254)
329 PRK05557 fabG 3-ketoacyl-(acyl 97.5 0.00084 1.8E-08 54.8 9.4 80 139-218 4-93 (248)
330 PRK08936 glucose-1-dehydrogena 97.5 0.00084 1.8E-08 55.5 9.5 78 139-218 6-95 (261)
331 PRK12746 short chain dehydroge 97.5 0.00083 1.8E-08 55.2 9.3 80 139-218 5-100 (254)
332 PRK05855 short chain dehydroge 97.5 0.00063 1.4E-08 62.9 9.5 80 139-218 314-402 (582)
333 PRK12935 acetoacetyl-CoA reduc 97.5 0.00089 1.9E-08 54.8 9.4 78 139-218 5-94 (247)
334 PRK09134 short chain dehydroge 97.5 0.00099 2.1E-08 55.0 9.6 80 139-218 8-97 (258)
335 PRK05565 fabG 3-ketoacyl-(acyl 97.5 0.00072 1.6E-08 55.2 8.7 77 140-218 5-93 (247)
336 PRK13656 trans-2-enoyl-CoA red 97.5 0.0015 3.2E-08 56.6 10.6 79 138-219 39-142 (398)
337 PRK12745 3-ketoacyl-(acyl-carr 97.5 0.0013 2.9E-08 54.0 10.1 77 140-218 2-90 (256)
338 PRK09135 pteridine reductase; 97.5 0.0012 2.6E-08 53.9 9.8 80 139-218 5-95 (249)
339 TIGR01829 AcAcCoA_reduct aceto 97.4 0.00065 1.4E-08 55.3 7.8 76 141-218 1-88 (242)
340 PLN02989 cinnamyl-alcohol dehy 97.4 0.001 2.3E-08 56.9 9.2 75 139-218 4-87 (325)
341 PLN02986 cinnamyl-alcohol dehy 97.4 0.001 2.2E-08 56.9 9.1 75 139-218 4-87 (322)
342 PRK12744 short chain dehydroge 97.4 0.0011 2.4E-08 54.6 9.1 80 139-218 7-99 (257)
343 PRK08642 fabG 3-ketoacyl-(acyl 97.4 0.0013 2.7E-08 54.0 9.4 79 139-218 4-91 (253)
344 PF00670 AdoHcyase_NAD: S-aden 97.4 0.0026 5.6E-08 48.2 10.1 103 136-254 19-123 (162)
345 PLN00015 protochlorophyllide r 97.4 0.00072 1.6E-08 57.5 8.1 75 144-218 1-85 (308)
346 PRK11705 cyclopropane fatty ac 97.4 0.0017 3.6E-08 57.0 10.4 109 122-238 150-267 (383)
347 PRK07069 short chain dehydroge 97.4 0.00072 1.6E-08 55.4 7.8 74 143-218 2-89 (251)
348 PRK07201 short chain dehydroge 97.4 0.00079 1.7E-08 63.4 8.8 77 140-218 371-458 (657)
349 TIGR03589 PseB UDP-N-acetylglu 97.4 0.0015 3.3E-08 56.0 9.8 77 139-218 3-84 (324)
350 cd01080 NAD_bind_m-THF_DH_Cycl 97.4 0.0031 6.7E-08 48.5 10.5 98 118-241 22-119 (168)
351 PRK00045 hemA glutamyl-tRNA re 97.4 0.0018 4E-08 57.6 10.6 141 60-219 91-253 (423)
352 PRK07041 short chain dehydroge 97.4 0.0017 3.6E-08 52.6 9.6 73 144-218 1-79 (230)
353 PRK12825 fabG 3-ketoacyl-(acyl 97.4 0.0013 2.7E-08 53.7 8.9 79 139-217 5-93 (249)
354 TIGR02685 pter_reduc_Leis pter 97.4 0.00093 2E-08 55.5 8.2 78 141-218 2-94 (267)
355 PRK07023 short chain dehydroge 97.4 0.0014 3E-08 53.5 9.1 77 141-218 2-87 (243)
356 PLN02896 cinnamyl-alcohol dehy 97.4 0.002 4.3E-08 55.9 10.5 79 137-218 7-89 (353)
357 TIGR01500 sepiapter_red sepiap 97.4 0.0009 2E-08 55.2 8.0 39 142-180 2-44 (256)
358 PRK12827 short chain dehydroge 97.4 0.0017 3.6E-08 53.1 9.5 80 139-218 5-97 (249)
359 PLN02653 GDP-mannose 4,6-dehyd 97.4 0.00074 1.6E-08 58.2 7.6 37 139-175 5-41 (340)
360 COG1028 FabG Dehydrogenases wi 97.3 0.0016 3.5E-08 53.4 9.2 78 139-218 4-96 (251)
361 TIGR00507 aroE shikimate 5-deh 97.3 0.0038 8.2E-08 52.1 11.3 94 137-241 114-217 (270)
362 PRK12859 3-ketoacyl-(acyl-carr 97.3 0.0021 4.5E-08 53.1 9.6 34 139-172 5-40 (256)
363 PF02826 2-Hacid_dh_C: D-isome 97.3 0.0028 6.1E-08 49.4 9.7 89 138-239 34-128 (178)
364 COG0686 Ald Alanine dehydrogen 97.3 0.016 3.5E-07 48.3 14.2 211 26-244 29-274 (371)
365 PLN02214 cinnamoyl-CoA reducta 97.3 0.0021 4.5E-08 55.6 9.7 78 138-218 8-91 (342)
366 PRK09730 putative NAD(P)-bindi 97.3 0.0014 2.9E-08 53.6 8.2 78 141-218 2-89 (247)
367 PRK08261 fabG 3-ketoacyl-(acyl 97.3 0.00078 1.7E-08 60.5 7.1 95 133-241 27-126 (450)
368 PRK12748 3-ketoacyl-(acyl-carr 97.3 0.002 4.3E-08 53.1 9.1 35 139-173 4-40 (256)
369 KOG1502 Flavonol reductase/cin 97.3 0.0014 2.9E-08 55.4 7.9 75 139-218 5-88 (327)
370 PRK14175 bifunctional 5,10-met 97.3 0.0045 9.7E-08 51.6 10.8 97 119-241 137-233 (286)
371 PLN02657 3,8-divinyl protochlo 97.2 0.0026 5.6E-08 56.0 9.9 105 136-241 56-184 (390)
372 TIGR01472 gmd GDP-mannose 4,6- 97.2 0.0017 3.6E-08 56.1 8.6 35 141-175 1-35 (343)
373 PRK06123 short chain dehydroge 97.2 0.0016 3.5E-08 53.3 7.9 79 140-218 2-90 (248)
374 PRK12548 shikimate 5-dehydroge 97.2 0.0055 1.2E-07 51.7 11.1 97 138-240 124-238 (289)
375 PRK06947 glucose-1-dehydrogena 97.2 0.0026 5.6E-08 52.1 8.9 78 141-218 3-90 (248)
376 PF13602 ADH_zinc_N_2: Zinc-bi 97.2 0.00034 7.3E-09 51.1 3.1 49 183-239 1-52 (127)
377 PRK14192 bifunctional 5,10-met 97.2 0.0068 1.5E-07 50.7 11.1 79 137-241 156-234 (283)
378 PF11017 DUF2855: Protein of u 97.2 0.039 8.4E-07 46.6 15.4 167 59-241 32-234 (314)
379 PRK06300 enoyl-(acyl carrier p 97.2 0.0016 3.5E-08 55.1 7.4 34 139-172 7-42 (299)
380 PLN02662 cinnamyl-alcohol dehy 97.1 0.002 4.3E-08 55.0 8.1 38 139-176 3-40 (322)
381 COG2242 CobL Precorrin-6B meth 97.1 0.005 1.1E-07 47.6 9.2 101 133-241 28-138 (187)
382 PLN02686 cinnamoyl-CoA reducta 97.1 0.0039 8.5E-08 54.4 9.7 45 137-181 50-94 (367)
383 PLN02650 dihydroflavonol-4-red 97.1 0.003 6.5E-08 54.7 8.7 74 139-217 4-86 (351)
384 PRK00377 cbiT cobalt-precorrin 97.1 0.015 3.3E-07 46.1 12.0 100 133-237 34-144 (198)
385 PLN00198 anthocyanidin reducta 97.1 0.0036 7.8E-08 53.9 9.1 76 139-217 8-89 (338)
386 TIGR01830 3oxo_ACP_reduc 3-oxo 97.1 0.0032 6.9E-08 51.1 8.3 76 143-218 1-86 (239)
387 PRK06924 short chain dehydroge 97.1 0.004 8.6E-08 51.1 8.9 40 141-180 2-42 (251)
388 PRK03369 murD UDP-N-acetylmura 97.1 0.0027 5.8E-08 57.6 8.4 74 136-219 8-81 (488)
389 PLN02427 UDP-apiose/xylose syn 97.1 0.0039 8.4E-08 54.8 9.2 77 138-217 12-95 (386)
390 PRK12824 acetoacetyl-CoA reduc 97.1 0.0045 9.7E-08 50.4 8.9 35 141-175 3-37 (245)
391 PF12847 Methyltransf_18: Meth 97.0 0.0015 3.2E-08 46.5 5.3 92 139-237 1-110 (112)
392 TIGR01035 hemA glutamyl-tRNA r 97.0 0.011 2.3E-07 52.6 11.7 140 60-219 89-251 (417)
393 cd01065 NAD_bind_Shikimate_DH 97.0 0.0085 1.8E-07 45.3 9.8 95 138-240 17-118 (155)
394 PF02353 CMAS: Mycolic acid cy 97.0 0.00046 1E-08 57.5 2.9 100 128-237 51-165 (273)
395 PRK00258 aroE shikimate 5-dehy 97.0 0.0054 1.2E-07 51.4 9.2 95 138-240 121-223 (278)
396 cd01075 NAD_bind_Leu_Phe_Val_D 97.0 0.042 9.1E-07 43.6 13.7 88 138-239 26-115 (200)
397 PF03435 Saccharop_dh: Sacchar 97.0 0.0096 2.1E-07 52.4 11.1 90 143-236 1-96 (386)
398 PRK11908 NAD-dependent epimera 97.0 0.0058 1.2E-07 52.9 9.5 75 141-217 2-77 (347)
399 PRK13940 glutamyl-tRNA reducta 97.0 0.014 3.1E-07 51.6 11.9 74 138-220 179-254 (414)
400 TIGR01809 Shik-DH-AROM shikima 97.0 0.0038 8.1E-08 52.4 7.8 74 139-218 124-200 (282)
401 PRK08125 bifunctional UDP-gluc 97.0 0.0046 1E-07 58.3 9.3 78 138-217 313-391 (660)
402 PLN02240 UDP-glucose 4-epimera 97.0 0.0056 1.2E-07 53.0 9.1 76 140-218 5-91 (352)
403 PLN00016 RNA-binding protein; 97.0 0.0044 9.5E-08 54.3 8.5 97 140-241 52-167 (378)
404 PF05368 NmrA: NmrA-like famil 96.9 0.0069 1.5E-07 49.2 9.1 71 143-217 1-73 (233)
405 PRK09009 C factor cell-cell si 96.9 0.0025 5.3E-08 51.8 6.4 72 141-218 1-77 (235)
406 PRK05579 bifunctional phosphop 96.9 0.0024 5.2E-08 56.1 6.6 75 139-219 187-278 (399)
407 COG0169 AroE Shikimate 5-dehyd 96.9 0.0052 1.1E-07 51.3 8.2 98 138-240 124-228 (283)
408 PLN02583 cinnamoyl-CoA reducta 96.9 0.01 2.2E-07 50.2 10.1 37 138-174 4-40 (297)
409 PF01262 AlaDh_PNT_C: Alanine 96.9 0.0048 1E-07 47.6 7.3 101 140-243 20-144 (168)
410 COG1090 Predicted nucleoside-d 96.9 0.0018 3.9E-08 53.0 4.9 67 143-219 1-67 (297)
411 PF02719 Polysacc_synt_2: Poly 96.9 0.013 2.8E-07 49.0 9.9 76 143-218 1-87 (293)
412 PF13561 adh_short_C2: Enoyl-( 96.8 0.0053 1.2E-07 50.1 7.7 70 147-218 1-83 (241)
413 PRK06718 precorrin-2 dehydroge 96.8 0.019 4.1E-07 45.7 10.5 114 139-262 9-124 (202)
414 TIGR03466 HpnA hopanoid-associ 96.8 0.0034 7.3E-08 53.6 6.7 72 142-218 2-74 (328)
415 PF02670 DXP_reductoisom: 1-de 96.8 0.026 5.7E-07 41.2 10.2 93 143-235 1-118 (129)
416 PRK10792 bifunctional 5,10-met 96.8 0.021 4.5E-07 47.6 10.9 97 119-241 138-234 (285)
417 smart00822 PKS_KR This enzymat 96.8 0.0086 1.9E-07 45.7 8.3 78 141-218 1-91 (180)
418 TIGR01831 fabG_rel 3-oxoacyl-( 96.8 0.0084 1.8E-07 48.7 8.5 76 143-218 1-86 (239)
419 PF01370 Epimerase: NAD depend 96.8 0.0041 8.9E-08 50.3 6.7 73 143-218 1-75 (236)
420 PRK14189 bifunctional 5,10-met 96.8 0.02 4.3E-07 47.8 10.6 97 119-241 137-233 (285)
421 PRK14027 quinate/shikimate deh 96.8 0.017 3.7E-07 48.5 10.4 43 138-181 125-168 (283)
422 PRK04148 hypothetical protein; 96.8 0.023 4.9E-07 41.8 9.5 76 137-221 14-90 (134)
423 PRK12549 shikimate 5-dehydroge 96.8 0.017 3.6E-07 48.6 10.1 93 139-240 126-229 (284)
424 PRK06719 precorrin-2 dehydroge 96.7 0.021 4.5E-07 43.5 9.7 83 139-232 12-94 (157)
425 TIGR03649 ergot_EASG ergot alk 96.7 0.0082 1.8E-07 50.3 8.3 96 142-240 1-106 (285)
426 PRK10217 dTDP-glucose 4,6-dehy 96.7 0.0056 1.2E-07 53.0 7.5 75 141-218 2-84 (355)
427 TIGR00406 prmA ribosomal prote 96.7 0.015 3.3E-07 49.0 9.6 96 137-241 157-262 (288)
428 TIGR00715 precor6x_red precorr 96.7 0.0059 1.3E-07 50.3 7.0 73 142-217 2-74 (256)
429 PRK14191 bifunctional 5,10-met 96.7 0.028 6.1E-07 46.8 10.9 97 119-241 136-232 (285)
430 TIGR01214 rmlD dTDP-4-dehydror 96.7 0.0057 1.2E-07 51.2 7.1 60 142-218 1-60 (287)
431 TIGR00438 rrmJ cell division p 96.7 0.033 7.1E-07 43.7 10.9 100 134-239 27-147 (188)
432 PRK13942 protein-L-isoaspartat 96.7 0.046 1E-06 43.8 11.8 97 133-237 70-175 (212)
433 PF02882 THF_DHG_CYH_C: Tetrah 96.7 0.025 5.4E-07 43.1 9.6 98 118-241 14-111 (160)
434 COG1086 Predicted nucleoside-d 96.7 0.014 3.1E-07 52.6 9.4 78 138-218 248-335 (588)
435 PF08659 KR: KR domain; Inter 96.7 0.015 3.2E-07 45.4 8.7 77 142-218 2-91 (181)
436 COG4122 Predicted O-methyltran 96.7 0.036 7.7E-07 44.4 10.7 107 133-242 53-170 (219)
437 TIGR02813 omega_3_PfaA polyket 96.7 0.01 2.2E-07 63.3 9.7 37 137-173 1994-2031(2582)
438 PLN02695 GDP-D-mannose-3',5'-e 96.6 0.0099 2.1E-07 52.0 8.3 77 137-217 18-94 (370)
439 TIGR02197 heptose_epim ADP-L-g 96.6 0.0066 1.4E-07 51.5 7.1 74 143-218 1-76 (314)
440 COG0373 HemA Glutamyl-tRNA red 96.6 0.052 1.1E-06 47.7 12.4 94 138-241 176-277 (414)
441 TIGR01181 dTDP_gluc_dehyt dTDP 96.6 0.012 2.5E-07 50.0 8.4 74 142-218 1-83 (317)
442 PRK14176 bifunctional 5,10-met 96.6 0.038 8.1E-07 46.1 10.9 97 119-241 143-239 (287)
443 PRK14188 bifunctional 5,10-met 96.6 0.032 7E-07 46.9 10.6 96 119-241 137-233 (296)
444 PLN02572 UDP-sulfoquinovose sy 96.6 0.017 3.7E-07 51.8 9.5 35 138-172 45-79 (442)
445 TIGR01777 yfcH conserved hypot 96.6 0.0026 5.6E-08 53.4 4.0 67 143-218 1-67 (292)
446 PF03807 F420_oxidored: NADP o 96.6 0.026 5.6E-07 38.9 8.5 85 142-237 1-93 (96)
447 cd05311 NAD_bind_2_malic_enz N 96.6 0.076 1.6E-06 43.0 12.3 99 129-238 14-128 (226)
448 PRK15181 Vi polysaccharide bio 96.6 0.015 3.2E-07 50.4 8.8 49 126-175 2-50 (348)
449 PRK10675 UDP-galactose-4-epime 96.6 0.016 3.4E-07 49.8 8.9 74 142-218 2-83 (338)
450 TIGR01470 cysG_Nterm siroheme 96.5 0.054 1.2E-06 43.2 11.2 114 139-262 8-124 (205)
451 cd05212 NAD_bind_m-THF_DH_Cycl 96.5 0.054 1.2E-06 40.3 10.4 96 120-241 8-103 (140)
452 KOG1611 Predicted short chain- 96.5 0.0056 1.2E-07 48.6 5.3 78 141-218 4-94 (249)
453 cd01079 NAD_bind_m-THF_DH NAD 96.5 0.04 8.7E-07 43.1 9.9 118 119-241 32-159 (197)
454 PRK14106 murD UDP-N-acetylmura 96.5 0.016 3.4E-07 52.1 8.9 70 139-218 4-78 (450)
455 PRK02472 murD UDP-N-acetylmura 96.5 0.011 2.5E-07 53.0 8.0 71 139-218 4-78 (447)
456 PRK08618 ornithine cyclodeamin 96.5 0.094 2E-06 45.0 13.2 101 138-249 125-232 (325)
457 PRK12550 shikimate 5-dehydroge 96.5 0.027 5.8E-07 47.0 9.5 91 136-240 118-218 (272)
458 TIGR01179 galE UDP-glucose-4-e 96.5 0.013 2.9E-07 49.8 8.0 74 142-218 1-80 (328)
459 PRK14194 bifunctional 5,10-met 96.5 0.044 9.5E-07 46.1 10.7 96 119-241 138-234 (301)
460 PRK13943 protein-L-isoaspartat 96.5 0.057 1.2E-06 46.1 11.6 99 133-237 74-179 (322)
461 PF04321 RmlD_sub_bind: RmlD s 96.5 0.0071 1.5E-07 50.9 6.0 60 142-218 2-61 (286)
462 PF01135 PCMT: Protein-L-isoas 96.4 0.015 3.2E-07 46.5 7.3 97 133-237 66-171 (209)
463 PLN02260 probable rhamnose bio 96.4 0.04 8.7E-07 52.1 11.3 77 139-218 5-90 (668)
464 PRK12749 quinate/shikimate deh 96.4 0.037 8E-07 46.6 9.7 36 139-175 123-159 (288)
465 PRK14982 acyl-ACP reductase; P 96.4 0.019 4.1E-07 49.3 8.0 93 138-241 153-249 (340)
466 PRK08309 short chain dehydroge 96.4 0.042 9.2E-07 42.7 9.4 78 142-220 2-87 (177)
467 PF02558 ApbA: Ketopantoate re 96.3 0.0071 1.5E-07 45.6 4.9 90 143-239 1-102 (151)
468 PRK09987 dTDP-4-dehydrorhamnos 96.3 0.012 2.7E-07 49.7 6.9 63 142-218 2-64 (299)
469 COG0569 TrkA K+ transport syst 96.3 0.047 1E-06 44.2 9.8 80 141-224 1-82 (225)
470 PRK07502 cyclohexadienyl dehyd 96.3 0.044 9.5E-07 46.6 10.2 89 141-239 7-101 (307)
471 PF03446 NAD_binding_2: NAD bi 96.3 0.078 1.7E-06 40.6 10.6 44 141-185 2-45 (163)
472 PRK13944 protein-L-isoaspartat 96.3 0.04 8.6E-07 43.9 9.1 98 133-238 66-173 (205)
473 PRK09620 hypothetical protein; 96.3 0.016 3.5E-07 47.0 6.7 82 139-220 2-99 (229)
474 TIGR00080 pimt protein-L-isoas 96.2 0.014 3E-07 46.9 6.1 97 133-237 71-176 (215)
475 COG2227 UbiG 2-polyprenyl-3-me 96.2 0.063 1.4E-06 43.3 9.6 95 138-238 58-161 (243)
476 PF02254 TrkA_N: TrkA-N domain 96.2 0.23 4.9E-06 35.4 11.9 92 143-238 1-96 (116)
477 PRK14172 bifunctional 5,10-met 96.2 0.075 1.6E-06 44.2 10.2 97 119-241 137-233 (278)
478 PRK14169 bifunctional 5,10-met 96.1 0.1 2.2E-06 43.5 11.0 97 119-241 135-231 (282)
479 PRK10084 dTDP-glucose 4,6 dehy 96.1 0.032 7E-07 48.2 8.5 74 142-218 2-83 (352)
480 COG1179 Dinucleotide-utilizing 96.1 0.083 1.8E-06 42.6 9.8 100 140-241 30-156 (263)
481 PRK14190 bifunctional 5,10-met 96.1 0.1 2.3E-06 43.5 10.9 97 119-241 137-233 (284)
482 PLN02166 dTDP-glucose 4,6-dehy 96.1 0.016 3.4E-07 51.9 6.5 36 138-173 118-153 (436)
483 TIGR02356 adenyl_thiF thiazole 96.1 0.064 1.4E-06 42.7 9.3 33 140-173 21-54 (202)
484 PLN02781 Probable caffeoyl-CoA 96.1 0.11 2.4E-06 42.4 10.9 106 133-240 62-180 (234)
485 PRK07574 formate dehydrogenase 96.1 0.11 2.3E-06 45.6 11.3 89 139-239 191-285 (385)
486 PRK07340 ornithine cyclodeamin 96.1 0.09 1.9E-06 44.7 10.7 99 138-250 123-229 (304)
487 TIGR01746 Thioester-redct thio 96.1 0.037 8E-07 47.8 8.6 34 142-175 1-36 (367)
488 PRK14177 bifunctional 5,10-met 96.1 0.083 1.8E-06 44.0 10.0 97 119-241 138-234 (284)
489 COG1088 RfbB dTDP-D-glucose 4, 96.1 0.084 1.8E-06 43.9 9.8 77 141-218 1-84 (340)
490 PRK14170 bifunctional 5,10-met 96.0 0.12 2.6E-06 43.1 10.8 97 119-241 136-232 (284)
491 PRK14178 bifunctional 5,10-met 96.0 0.1 2.2E-06 43.5 10.4 97 119-241 131-227 (279)
492 PLN02928 oxidoreductase family 96.0 0.13 2.7E-06 44.6 11.5 93 139-239 158-263 (347)
493 TIGR02469 CbiT precorrin-6Y C5 96.0 0.15 3.3E-06 36.5 10.5 99 133-238 13-122 (124)
494 PRK11207 tellurite resistance 96.0 0.026 5.6E-07 44.7 6.7 96 135-238 26-134 (197)
495 PRK05562 precorrin-2 dehydroge 96.0 0.11 2.4E-06 41.8 10.2 115 139-263 24-141 (223)
496 PLN02520 bifunctional 3-dehydr 96.0 0.03 6.6E-07 51.3 7.9 93 139-240 378-477 (529)
497 PRK14173 bifunctional 5,10-met 96.0 0.11 2.5E-06 43.3 10.5 97 119-241 134-230 (287)
498 PRK05447 1-deoxy-D-xylulose 5- 96.0 0.099 2.2E-06 45.5 10.5 94 141-235 2-119 (385)
499 PLN02778 3,5-epimerase/4-reduc 96.0 0.033 7.1E-07 47.2 7.6 32 139-170 8-39 (298)
500 PRK14180 bifunctional 5,10-met 96.0 0.1 2.2E-06 43.5 10.2 97 119-241 137-233 (282)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.2e-52 Score=346.99 Aligned_cols=257 Identities=37% Similarity=0.560 Sum_probs=237.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.+.|+|+++||+|+|++||+|++|++.++|.++... +|++||||.+|+|+++|++|+.|+
T Consensus 4 mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 4 MKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred eEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcceEEEEEEecCCCccCC
Confidence 899999999988 99999999999999999999999999999999999998765 899999999999999999999999
Q ss_pred CCCEEEE----------------------------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||||.. +..+|+|+||+++|+++++++|+++++++||++.|++.|.|++|+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk 160 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALK 160 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehh
Confidence 9999964 224799999999999999999999999999999999999999995
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+ .+++||++|+|+|+ ||+|.+++|+|+.+|++|+++++++++++.++++|++++++..+.+..+.+.+. +|++
T Consensus 161 ~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~-----~d~i 233 (339)
T COG1064 161 K-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEI-----ADAI 233 (339)
T ss_pred h-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhh-----CcEE
Confidence 5 89999999999998 699999999999999999999999999999999999999997777777766653 8999
Q ss_pred EECCChhhHHHhhhccccCCEEEEEecCC-CCccccchhhHhhcceEEEEeecccc
Q 024011 213 LDCMGASYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 213 i~~~g~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~ 267 (274)
+++++...++..++.|+++|+++++|... .....++...++.++++|.|+...+.
T Consensus 234 i~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~ 289 (339)
T COG1064 234 IDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR 289 (339)
T ss_pred EECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH
Confidence 99999666999999999999999999984 56567888889999999999997643
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=6.8e-50 Score=339.31 Aligned_cols=265 Identities=45% Similarity=0.752 Sum_probs=247.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++.++++..+++++.|.|.|++|||+|||+++|||+.|...+.|..+.....|++||.|++|+|+++|++++.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 99999999999877999999999999999999999999999999999997555556899999999999999999999999
Q ss_pred CCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHH
Q 024011 81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (274)
Q Consensus 81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~ 157 (274)
+||||+... .+|+|+||..+|++.++++|+++|+++||++++.++|||+++....++++|++|||+||+|++|.+++
T Consensus 81 ~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~ai 160 (326)
T COG0604 81 VGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAI 160 (326)
T ss_pred CCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHH
Confidence 999999986 67999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred HHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEE
Q 024011 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 158 ~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~ 237 (274)
|+++..|+++++++.++++.+.++++|+++++++.+.++.+++++.++++++|+|+|+.|+..+...++.++++|+++.+
T Consensus 161 QlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~i 240 (326)
T COG0604 161 QLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSI 240 (326)
T ss_pred HHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEE
Confidence 99999998877878788888899999999999999999999999999988999999999999999999999999999999
Q ss_pred ecCC-CCccccchhhHhhcceEEEEeecc
Q 024011 238 GTQG-GAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 238 g~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
|... .....++...++.+.+++.|+...
T Consensus 241 g~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 241 GALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred ecCCCCCccccCHHHHhhccEEEEEecce
Confidence 9988 455567777888888888888765
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=5.8e-45 Score=284.11 Aligned_cols=250 Identities=36% Similarity=0.573 Sum_probs=236.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
|-+++++.|..+++++++.|.|+|.|+|++||..++|+|..|..++.|-+. +...|++||.|.+|+|+.+|++++++++
T Consensus 10 k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gvtdrkv 88 (336)
T KOG1197|consen 10 KCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGVTDRKV 88 (336)
T ss_pred eEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCcccccc
Confidence 568899999999999999999999999999999999999999999999885 3457999999999999999999999999
Q ss_pred CCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHH
Q 024011 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (274)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~ 161 (274)
||||.-+.+.|.|+|+..+|...++++|+.+++++|+++....+|||..+++...+++|++||++.|.||+|++++|+++
T Consensus 89 GDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~r 168 (336)
T KOG1197|consen 89 GDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLR 168 (336)
T ss_pred ccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHH
Confidence 99999998999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..|++++.+..+.++.+.+++.|+.+.++++.+|+.+++.+.++++|+|+++|..|.+.+...+.+|++.|.++.+|...
T Consensus 169 a~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~as 248 (336)
T KOG1197|consen 169 AVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNAS 248 (336)
T ss_pred hcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCccccchhhH
Q 024011 242 GAKTELNITSL 252 (274)
Q Consensus 242 ~~~~~~~~~~~ 252 (274)
+....+++..+
T Consensus 249 gl~~p~~l~~l 259 (336)
T KOG1197|consen 249 GLIDPIPLNQL 259 (336)
T ss_pred CCCCCeehhhc
Confidence 76555554443
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.8e-45 Score=292.88 Aligned_cols=258 Identities=26% Similarity=0.411 Sum_probs=229.0
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
++|.+..++++..+++.+++.|+|+++||+|++++||||++|++.+.|.++. ..+|.++|||++|+|+++|++|+.|++
T Consensus 11 ~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs~V~~~ki 89 (360)
T KOG0023|consen 11 FGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGSNVTGFKI 89 (360)
T ss_pred EEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECCCcccccc
Confidence 5788888888767888999999999999999999999999999999999987 679999999999999999999999999
Q ss_pred CCEEEE-------------------Ee-----------c-----CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHH
Q 024011 82 GDQVCA-------------------LL-----------G-----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 82 Gd~V~~-------------------~~-----------~-----~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
||||-. +| . .|+|++|+++++..++++|++++.+.||++.|+..|
T Consensus 90 GD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGIT 169 (360)
T KOG0023|consen 90 GDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGIT 169 (360)
T ss_pred cCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceE
Confidence 999832 01 1 356999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCC-CCcHHHHHHHHh
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYK-TEDFVARVKEET 204 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~ 204 (274)
.|.+| ...++.||+++.|.|+ ||+|.+++|+++++|.+|++++++.+ +.+.++.+|++..++.. +.++.+.+.+.+
T Consensus 170 vYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~ 247 (360)
T KOG0023|consen 170 VYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTT 247 (360)
T ss_pred Eeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhh
Confidence 99999 5567889999999998 56999999999999999999999884 55666789999999887 788888888876
Q ss_pred CCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++ ++|.|.+. ....++.++++++.+|+++++|.... ...++..+++.+.++|.|+...
T Consensus 248 dg-~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG 305 (360)
T KOG0023|consen 248 DG-GIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVG 305 (360)
T ss_pred cC-cceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccc
Confidence 54 56777766 44568899999999999999999887 6789999999999999999865
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.6e-45 Score=293.63 Aligned_cols=264 Identities=24% Similarity=0.349 Sum_probs=229.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCC--CCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
|+|+++.++++ +++++.|.|++ .|+||+|++.++|||+||+|.+....... ...|+++|||.+|+|.++|++|+
T Consensus 5 ~~A~vl~g~~d---i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 5 NLALVLRGKGD---IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cceeEEEccCc---eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 78999999887 88999999987 99999999999999999999997654432 24699999999999999999999
Q ss_pred CCCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHH
Q 024011 78 RWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS 129 (274)
Q Consensus 78 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~ 129 (274)
++++||||+.-. .+|++++|++.+++++++||+++|++++| |..+++++|+
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~H 160 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVH 160 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhh
Confidence 999999997411 36999999999999999999999999998 6677999999
Q ss_pred HHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCC----cHHHHHHHHh
Q 024011 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE----DFVARVKEET 204 (274)
Q Consensus 130 ~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~ 204 (274)
|. +++.++.|.++||+|| |++|+.+...|+..|+ +|++++..+.+++.++++|++.+.+.... ++.+.+....
T Consensus 161 Ac-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~ 238 (354)
T KOG0024|consen 161 AC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKAL 238 (354)
T ss_pred hh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhc
Confidence 98 7789999999999998 9999999999999999 89999999999999999999998765543 3344445555
Q ss_pred CCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeeccccccCc
Q 024011 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLISGPWC 271 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~y~ 271 (274)
+...+|+.|||+|... .+.++..++.+|++++++. +.....++......+++.+.|++.+....|.
T Consensus 239 g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~-g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~ 305 (354)
T KOG0024|consen 239 GKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGM-GAEEIQFPIIDVALKEVDLRGSFRYCNGDYP 305 (354)
T ss_pred cccCCCeEEEccCchHHHHHHHHHhccCCEEEEecc-CCCccccChhhhhhheeeeeeeeeeccccHH
Confidence 5556999999999854 7889999999999888875 4556799999999999999999988655443
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.7e-42 Score=301.55 Aligned_cols=261 Identities=29% Similarity=0.376 Sum_probs=231.6
Q ss_pred CEEEEEcCCCC------CcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecC
Q 024011 1 MKAIVITQPGS------PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74 (274)
Q Consensus 1 m~a~~~~~~~~------~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~ 74 (274)
|||+++.++|+ ++.+++++.|.|+|+++||+|||.+++||++|++.+.|.++. ..|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~ 78 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE 78 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence 99999999875 367999999999999999999999999999999999886542 3588999999999999999
Q ss_pred CCCCCCCCCEEEEEec------------------------------------------------CCeeeeEEeeeCCCeE
Q 024011 75 NVSRWKVGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVL 106 (274)
Q Consensus 75 ~~~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~ 106 (274)
+++++++||+|+.... +|+|+||+.+|.+.++
T Consensus 79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 9999999999986310 2689999999999999
Q ss_pred ECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCC
Q 024011 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGA 185 (274)
Q Consensus 107 ~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~ 185 (274)
++|+++++++++.+.++..++|+++.+..++++|++|+|.|+ |++|++++|+++..|+ +|+++++++++++.++++|+
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga 237 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGA 237 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCC
Confidence 999999999999999999999999877788999999999996 9999999999999999 69999999999999999999
Q ss_pred CEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEee
Q 024011 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+.+++....++.+.+.+.+++ ++|++||++|. ..+..+++.++++|+++.+|.... ....++...++.+++++.|++
T Consensus 238 ~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 316 (371)
T cd08281 238 TATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSY 316 (371)
T ss_pred ceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence 999988877888888887765 79999999986 457888999999999999997653 234677778889999999987
Q ss_pred cc
Q 024011 264 PL 265 (274)
Q Consensus 264 ~~ 265 (274)
..
T Consensus 317 ~~ 318 (371)
T cd08281 317 MG 318 (371)
T ss_pred cC
Confidence 54
No 7
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.9e-41 Score=292.61 Aligned_cols=259 Identities=23% Similarity=0.360 Sum_probs=229.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++++++ +++++.|.|+|+++||+|||.++|+|++|++.+.|.++. .+|.++|||++|+|+++|+++++|+
T Consensus 2 mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 2 VRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred cEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcccC
Confidence 999999998875 888999999999999999999999999999998886542 3588999999999999999999999
Q ss_pred CCCEEEEEe----------------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccC
Q 024011 81 VGDQVCALL----------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l 120 (274)
+||+|+... .+|+|+||+.+|...++++|+++++++++.+
T Consensus 78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l 157 (358)
T TIGR03451 78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL 157 (358)
T ss_pred CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence 999997621 2488999999999999999999999999999
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
.++..++|.++.+...+++|+++||+|+ |++|++++|+++..|++ |+++++++++++.++++|++.+++....++.+.
T Consensus 158 ~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 236 (358)
T TIGR03451 158 GCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEA 236 (358)
T ss_pred cccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHH
Confidence 9899999988777788999999999986 99999999999999994 999999999999999999999998887788888
Q ss_pred HHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCC-ccccchhhHhhcceEEEEeec
Q 024011 200 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+.+.+++.++|++||++|. ..+..+++.++++|+++.+|..... ...+++..++.+++++.+++.
T Consensus 237 i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~ 303 (358)
T TIGR03451 237 IRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY 303 (358)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence 8888877789999999996 4578889999999999999986542 345677678888899988763
No 8
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=7.6e-42 Score=278.58 Aligned_cols=258 Identities=28% Similarity=0.385 Sum_probs=231.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
+|+++..++++| |++++++..+|++|||+||+.++|+|++|.+..+|..|.+ +|.++|||.+|+|++||++|+.++
T Consensus 3 ~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~vk 78 (366)
T COG1062 3 TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTSVK 78 (366)
T ss_pred ceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccccC
Confidence 589999999988 9999999999999999999999999999999999998875 799999999999999999999999
Q ss_pred CCCEEEEEec------------------------------------------------CCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||+|+.... -++|++|.++++.++++++++.
T Consensus 79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 9999975320 1489999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
+++.++.+.|...|.+.+..+.+++++|+++.|+|. |++|++++|-|+..|+ ++++++.+++++++++++|+.+.+|.
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~ 237 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNP 237 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecc
Confidence 999999999999999999989999999999999997 9999999999999999 89999999999999999999999998
Q ss_pred CCC-cHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEeecc
Q 024011 192 KTE-DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+. +..+.+.+.+++ |.|.+||++|.. .+..++++..++|+.+.+|.... ..+.++...+... .++.|+...
T Consensus 238 ~~~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G 312 (366)
T COG1062 238 KEVDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFG 312 (366)
T ss_pred hhhhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeec
Confidence 776 588888888875 799999999984 58899999999999999998763 3334555555554 888888754
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=4.5e-41 Score=289.53 Aligned_cols=257 Identities=29% Similarity=0.442 Sum_probs=223.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++ .+++++.+.|+|+++||+||+.++++|++|++.+.+.+......|.++|||++|+|+++|++++.|+
T Consensus 1 mka~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVFPGDR---TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEEecCC---ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 9999998654 4999999999999999999999999999999988776443233578999999999999999999999
Q ss_pred CCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|+... .+|+|++|+.+|.+.++++|+++++++++++++++.++|+++
T Consensus 78 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l- 156 (339)
T cd08239 78 VGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL- 156 (339)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-
Confidence 999998642 258999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
....+++|++++|+|+ |++|++++|+++..|++ |+++++++++++.++++|++.+++.+..+ .+.+.+.++++++|+
T Consensus 157 ~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~~~~~~d~ 234 (339)
T cd08239 157 RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIRELTSGAGADV 234 (339)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHHhCCCCCCE
Confidence 4567889999999986 99999999999999998 99999999999999999999998887666 667777777678999
Q ss_pred EEECCChhh-HHHhhhccccCCEEEEEecCCCCccccch-hhHhhcceEEEEeecc
Q 024011 212 ILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQGIVPL 265 (274)
Q Consensus 212 vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~ 265 (274)
+||+.|+.. ...+++.++++|+++.+|..... .++. ..++.+++++.|++..
T Consensus 235 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~ 288 (339)
T cd08239 235 AIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYF 288 (339)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecC
Confidence 999999865 47889999999999999976543 2332 4567789999998764
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.1e-40 Score=290.97 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=222.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++++++ +++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++.|+
T Consensus 11 mka~~~~~~~~~--~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~ 88 (381)
T PLN02740 11 CKAAVAWGPGEP--LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLK 88 (381)
T ss_pred eEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCC
Confidence 899999987754 788899999999999999999999999999999887643345688999999999999999999999
Q ss_pred CCCEEEEEe---------------------------------------------------cCCeeeeEEeeeCCCeEECC
Q 024011 81 VGDQVCALL---------------------------------------------------GGGGYAEKVAVPAGQVLPVP 109 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------------------------------~~g~~~~~~~~~~~~~~~~p 109 (274)
+||||++.. .+|+|+||+.+|.+.++++|
T Consensus 89 vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP 168 (381)
T PLN02740 89 AGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKID 168 (381)
T ss_pred CCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECC
Confidence 999998642 14899999999999999999
Q ss_pred CCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEE
Q 024011 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC 188 (274)
Q Consensus 110 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 188 (274)
+++++++++.+.++..++|+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+
T Consensus 169 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~ 247 (381)
T PLN02740 169 PNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF 247 (381)
T ss_pred CCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEE
Confidence 999999999999999999998877788999999999996 9999999999999999 69999999999999999999988
Q ss_pred EeCCCC--cHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCCC-ccccchhhHhhcceEEEEee
Q 024011 189 INYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 189 ~~~~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~ 263 (274)
++.+.. ++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|..... ...++... +.+++++.|++
T Consensus 248 i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~-~~~~~~i~g~~ 325 (381)
T PLN02740 248 INPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPME-LFDGRSITGSV 325 (381)
T ss_pred EecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHH-HhcCCeEEEEe
Confidence 887653 366777777765 79999999997 4578888999886 999999986542 12333332 34678898876
Q ss_pred cc
Q 024011 264 PL 265 (274)
Q Consensus 264 ~~ 265 (274)
..
T Consensus 326 ~~ 327 (381)
T PLN02740 326 FG 327 (381)
T ss_pred cC
Confidence 53
No 11
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.8e-40 Score=282.02 Aligned_cols=263 Identities=29% Similarity=0.435 Sum_probs=227.6
Q ss_pred CEEEEEcCCCCC---cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSP---EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
||++++++++++ +.+++++.|.|.|+++||+||+.++++|++|++.+.|.++.....|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 999999998865 56889999999999999999999999999999999887654445688999999999999999998
Q ss_pred C-CCCCCEEEEEec-CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEe-cCCchHHH
Q 024011 78 R-WKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH-GGSSGIGT 154 (274)
Q Consensus 78 ~-~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~-Ga~g~iG~ 154 (274)
+ |++||+|+++.. +|+|++|+.+|.+.++++|+++++++++.++....++|..+ ..... ++++++|+ +++|++|+
T Consensus 81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~ 158 (324)
T cd08291 81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGR 158 (324)
T ss_pred ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHH
Confidence 6 999999998754 38999999999999999999999999998888888997554 44454 45556565 78899999
Q ss_pred HHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEE
Q 024011 155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234 (274)
Q Consensus 155 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~ 234 (274)
+++|+++..|++++++++++++++.++++|++++++.+..++.+.+.+.+.++++|++||+.|+......+++++++|++
T Consensus 159 ~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~ 238 (324)
T cd08291 159 MLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTL 238 (324)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEE
Confidence 99999999999999999999999999999999999988888888888888777899999999988788889999999999
Q ss_pred EEEecCCCCcc-ccchhhHhhcceEEEEeecc
Q 024011 235 FIIGTQGGAKT-ELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 235 v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~ 265 (274)
+.+|...+... .++...++.+++++.++...
T Consensus 239 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (324)
T cd08291 239 YVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLT 270 (324)
T ss_pred EEEEecCCCCcccCCHHHHhhcCcEEEEEEHH
Confidence 99997654432 35566778889999888754
No 12
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.9e-39 Score=282.04 Aligned_cols=257 Identities=26% Similarity=0.378 Sum_probs=217.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++...++. +++++.|.|+|+++||+|||.++|+|++|++.+.|.++. ...|.++|||++|+|+++|++++.|+
T Consensus 2 ~~a~~~~~~~~~--l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~ 78 (368)
T TIGR02818 2 SRAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSVK 78 (368)
T ss_pred ceEEEEecCCCC--eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccCC
Confidence 899999887654 889999999999999999999999999999999887653 24688999999999999999999999
Q ss_pred CCCEEEEEec------------------------------------------------CCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||||++... +|+|+||+.+|.+.++++|+++
T Consensus 79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 9999986420 2689999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++++++++++.++|+++.+..++++|+++||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.+++.
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~ 237 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNP 237 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcc
Confidence 999999999999999999877788999999999986 9999999999999999 79999999999999999999998876
Q ss_pred CC--CcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEee
Q 024011 192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.+ .++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|.... ....+....++. +..+.|+.
T Consensus 238 ~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~ 312 (368)
T TIGR02818 238 NDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSA 312 (368)
T ss_pred cccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEee
Confidence 53 3455667776665 79999999996 4578889999886 99999997642 222333333333 33466654
No 13
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=4e-40 Score=261.41 Aligned_cols=264 Identities=25% Similarity=0.385 Sum_probs=235.1
Q ss_pred EEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 2 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 2 ~a~~~~~~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|++++.+.++| +++++.+.+.|....++|+||..++.|||+|+..++|.||..+..|.+-|+|++|+|+.+|+++..|+
T Consensus 21 kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk 100 (354)
T KOG0025|consen 21 KALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFK 100 (354)
T ss_pred ceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCccC
Confidence 78999999988 68999999999888888999999999999999999999998888899999999999999999999999
Q ss_pred CCCEEEEEecC-CeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 81 VGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 81 ~Gd~V~~~~~~-g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
+||+|+....+ |+|++|.+.+++.++++++.++++.||++..+.+|||..|.+..++++|++++-.||.+++|++++|+
T Consensus 101 ~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQl 180 (354)
T KOG0025|consen 101 PGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQL 180 (354)
T ss_pred CCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHH
Confidence 99999987643 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHH----HHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 160 GKCQGVRVFVTAGSEEKLAVC----KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
|+..|.+-+-+.|+....+++ +.+|+++++...+....+..........+.+.+||+|+.......+.|.++|+.+
T Consensus 181 aka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~Ggtmv 260 (354)
T KOG0025|consen 181 AKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMV 260 (354)
T ss_pred HHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEE
Confidence 999999999999887766554 5799999985433221111211122345799999999998888999999999999
Q ss_pred EEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 236 IIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
..|.+...+..++...++++.+.+.|++..
T Consensus 261 TYGGMSkqPv~~~ts~lIFKdl~~rGfWvt 290 (354)
T KOG0025|consen 261 TYGGMSKQPVTVPTSLLIFKDLKLRGFWVT 290 (354)
T ss_pred EecCccCCCcccccchheeccceeeeeeee
Confidence 999999888999999999999999999975
No 14
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=3.8e-39 Score=275.72 Aligned_cols=263 Identities=25% Similarity=0.402 Sum_probs=232.7
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++++++++ ..+++++.|.|.+.++||+|||.++++|++|++.+.|.++.....|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 899999987765 4589999999999999999999999999999999888765333457889999999999999999999
Q ss_pred CCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
++||+|+++..+|+|++|+.++...++++|+++++++++.++....++|+++ ...++++|++++|+|++|.+|++++++
T Consensus 81 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~ 159 (324)
T cd08292 81 QVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAML 159 (324)
T ss_pred CCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHH
Confidence 9999999986579999999999999999999999999998888889999987 457899999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
|+.+|++++++++++++.+.++++|.+.+++.+..++.+.+.+.+.++++|++||+.|+.....++++++++|+++.+|.
T Consensus 160 a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (324)
T cd08292 160 AAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGS 239 (324)
T ss_pred HHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEec
Confidence 99999999999999999888888899888888877888888888888889999999998878889999999999999987
Q ss_pred CCCCccccchhhHhhcceEEEEeec
Q 024011 240 QGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.......+++.....++.++.++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 240 MSGEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred CCCCCCcCCHHHHhhCCCEEEEEEc
Confidence 6433344555556778888888764
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=3e-39 Score=281.44 Aligned_cols=256 Identities=24% Similarity=0.300 Sum_probs=219.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++.++++ .+++++.|.|+|+++||+|||.++|||++|++.+.+.. ..|.++|||++|+|+++|+++++|+
T Consensus 13 mka~~~~~~~~--~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~~~~ 86 (378)
T PLN02827 13 CRAAVAWGAGE--ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVTEFE 86 (378)
T ss_pred eEEEEEecCCC--CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCcccC
Confidence 89999987654 38899999999999999999999999999999887642 2477899999999999999999999
Q ss_pred CCCEEEEEec------------------------------------------------CCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||+|++... +|+|+||+.+|...++++|+++
T Consensus 87 ~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 87 KGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 9999987531 3789999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++++.+.+++.++|+++.+..++++|+++||+|+ |++|++++|+++..|+ .|+++++++++++.++++|++.+++.
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~ 245 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP 245 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence 999999888888899987767778999999999996 9999999999999999 47778889999999999999988877
Q ss_pred CC--CcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccC-CEEEEEecCCCCccccch-hhHhhcceEEEEeecc
Q 024011 192 KT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGAKTELNI-TSLFAKRLTVQGIVPL 265 (274)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~ 265 (274)
.. +++.+.+.+.+++ ++|++||++|.. .+..+++.++++ |+++.+|..... ..++. ..++.+++++.|+...
T Consensus 246 ~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
T PLN02827 246 NDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSGRTLKGSLFG 322 (378)
T ss_pred cccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcCceEEeeecC
Confidence 64 3566667776665 799999999975 578899999998 999999986543 23333 3577789999998764
No 16
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=6.4e-39 Score=279.09 Aligned_cols=259 Identities=22% Similarity=0.292 Sum_probs=221.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..++++ +++++.+.|+|+++||+||+.+++||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus 3 ~ka~~~~~~~~~--~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (369)
T cd08301 3 CKAAVAWEAGKP--LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVTDLK 79 (369)
T ss_pred cEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCCccc
Confidence 899999987654 899999999999999999999999999999999886542 34688999999999999999999999
Q ss_pred CCCEEEEEe-------------------------------------------------cCCeeeeEEeeeCCCeEECCCC
Q 024011 81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~ 111 (274)
+||+|+.+. ..|+|+||+.++...++++|++
T Consensus 80 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 80 PGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred cCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 999998741 1378999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
+++++++++.++..++|+++.+..++++|++|+|+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~ 238 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN 238 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 9999999998999999998877788999999999986 9999999999999999 8999999999999999999998887
Q ss_pred CCC--CcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccC-CEEEEEecCCCC-ccccchhhHhhcceEEEEeecc
Q 024011 191 YKT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
... .++.+.+.+.+++ ++|++||+.|.. .+..++++++++ |+++.+|..... ...++...+ .+++++.|++..
T Consensus 239 ~~~~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 316 (369)
T cd08301 239 PKDHDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFG 316 (369)
T ss_pred ccccchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEecC
Confidence 654 3455666666655 799999999865 477889999995 999999987542 334444434 368999987653
No 17
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2e-38 Score=275.55 Aligned_cols=258 Identities=28% Similarity=0.363 Sum_probs=221.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++...+++ +++++.|.|.++++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++++
T Consensus 3 ~ka~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08277 3 CKAAVAWEAGKP--LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTNLK 78 (365)
T ss_pred cEEEEEccCCCC--cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCccCC
Confidence 799999876653 88999999999999999999999999999999988654 34678999999999999999999999
Q ss_pred CCCEEEEEe-----------------------------------------------cCCeeeeEEeeeCCCeEECCCCCC
Q 024011 81 VGDQVCALL-----------------------------------------------GGGGYAEKVAVPAGQVLPVPSGVS 113 (274)
Q Consensus 81 ~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~ 113 (274)
+||+|++.. ..|+|+||+.++.+.++++|++++
T Consensus 79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 999998741 147899999999999999999999
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCC
Q 024011 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK 192 (274)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (274)
+++++++.+++.++|+++.+..++++|++++|+|+ |++|++++++++..|+ +|+++++++++++.++++|++.+++..
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999998877788999999999985 9999999999999999 799999999999999999999888765
Q ss_pred CC--cHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 193 TE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.. ++.+.+.+.++ .++|++||++|. ..+..++++++++ |+++.+|...+....++...++. ++++.|++..
T Consensus 238 ~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~ 312 (365)
T cd08277 238 DSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFG 312 (365)
T ss_pred cccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecC
Confidence 43 34666776666 579999999996 4568889999875 99999998654334555555654 7888887654
No 18
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.2e-38 Score=275.50 Aligned_cols=257 Identities=28% Similarity=0.374 Sum_probs=216.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++...+++ +++++.|.|.|+++||+||+.++|+|++|++.+.|.++.. .+|.++|||++|+|+++|+++++|+
T Consensus 3 ~~a~~~~~~~~~--~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~ 79 (368)
T cd08300 3 CKAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG-LFPVILGHEGAGIVESVGEGVTSVK 79 (368)
T ss_pred ceEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC-CCCceeccceeEEEEEeCCCCccCC
Confidence 899998877654 8899999999999999999999999999999998876532 4688999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||+|++.. ..|+|+||+.++.+.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 80 PGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 999998641 12589999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++++.+++++.++|+++.+...+++|+++||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++.
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~ 238 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP 238 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence 999999999999999998877788999999999986 9999999999999999 79999999999999999999999887
Q ss_pred CCC--cHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEee
Q 024011 192 KTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 192 ~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~ 263 (274)
... ++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|.... .....+...++ ++.++.++.
T Consensus 239 ~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~ 313 (368)
T cd08300 239 KDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTA 313 (368)
T ss_pred cccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEE
Confidence 653 466777777765 89999999997 4678889999886 99999997642 22233333333 234555543
No 19
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-38 Score=274.23 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=209.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhc-CCCCC-CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++.+++. +++++.+.| ++++||+|||.++|||++|++.+. |.++. ....|.++|||++|+|+++ ++++
T Consensus 5 ~~~~~~~~~~~---~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 5 TQSCVVAGKKD---VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ceEEEEecCCc---eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 68999987665 899999987 689999999999999999999875 33322 2346899999999999999 7889
Q ss_pred CCCCCEEEEE--------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHH
Q 024011 79 WKVGDQVCAL--------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 79 ~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
|++||+|+.. ..+|+|+||++++.+.++++|+++++++++ +..++.+
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~ 157 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAV 157 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHH
Confidence 9999999752 125999999999999999999999998765 5577889
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhC
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
+|+++.+ ....+|++++|+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++.+++++.+ +.+..
T Consensus 158 a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~-~~~~~- 233 (343)
T PRK09880 158 AIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDH-YKAEK- 233 (343)
T ss_pred HHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHH-HhccC-
Confidence 9999854 45568999999996 9999999999999999 689999999999999999999999877655433 22222
Q ss_pred CCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 206 GKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 206 ~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.++|++||++|.. .+..+++.++++|+++.+|.... ...+++..++.+++++.|++..
T Consensus 234 -g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 234 -GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA-PPEFPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred -CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHHhCCcEEEEEeec
Confidence 2599999999974 57889999999999999997543 3467777888899999988653
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.7e-38 Score=275.03 Aligned_cols=257 Identities=27% Similarity=0.365 Sum_probs=213.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++.+...+..+.++..+++.|.|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++.|+
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~ 89 (360)
T PLN02586 11 QKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKNVKKFK 89 (360)
T ss_pred hheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCCCCccC
Confidence 56666555555556888999999999999999999999999999998876542 24688999999999999999999999
Q ss_pred CCCEEEEEe-----------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHH
Q 024011 81 VGDQVCALL-----------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (274)
Q Consensus 81 ~Gd~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~ 125 (274)
+||+|+... .+|+|+||+++|.+.++++|+++++++++++.+...
T Consensus 90 vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ 169 (360)
T PLN02586 90 EGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGI 169 (360)
T ss_pred CCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchH
Confidence 999997421 158999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH-HHHHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
|+|+++.....+++|++|+|.|+ |++|++++|+++..|+++++++.++++. +.++++|++.+++.... +.+.+.+
T Consensus 170 ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~---~~~~~~~ 245 (360)
T PLN02586 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP---EKMKAAI 245 (360)
T ss_pred HHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH---HHHHhhc
Confidence 99999866666789999999886 9999999999999999998888776654 45578999988875542 2344444
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+ ++|++||++|.. .+..++++++++|+++.+|.... ...++...++.+++.+.|+...
T Consensus 246 ~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~ 304 (360)
T PLN02586 246 G--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK-PLELPIFPLVLGRKLVGGSDIG 304 (360)
T ss_pred C--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC-CCccCHHHHHhCCeEEEEcCcC
Confidence 3 599999999974 57889999999999999997643 3467777778888888887653
No 21
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.1e-38 Score=278.47 Aligned_cols=234 Identities=22% Similarity=0.371 Sum_probs=196.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-------CCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEec
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIK-------DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG 73 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~-------~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG 73 (274)
|||+++.++++ +++++.|.|+|+ +|||+|||.++|||++|++.+.|.++. ..|.++|||++|+|+++|
T Consensus 3 mka~v~~~~~~---~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 3 NRGVVYLGPGK---VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIEKG 77 (393)
T ss_pred ceEEEEecCCc---eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEEEc
Confidence 99999987764 889999999874 689999999999999999999886532 358899999999999999
Q ss_pred CCCCCCCCCCEEEEEe-------------------------------------cCCeeeeEEeeeCC--CeEECCCCCCH
Q 024011 74 KNVSRWKVGDQVCALL-------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL 114 (274)
Q Consensus 74 ~~~~~~~~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~ 114 (274)
+++++|++||||+... .+|+|+||+++|.. .++++|++++.
T Consensus 78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~ 157 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA 157 (393)
T ss_pred CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccc
Confidence 9999999999996521 25899999999964 79999998754
Q ss_pred ----HhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEE-EEecChhhHHHHHHcCCCEEE
Q 024011 115 ----KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVF-VTAGSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 115 ----~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~-~~~~~~~~~~~~~~~g~~~~~ 189 (274)
.+++++.+++.++|+++. ..++++|++++|.|+ |++|++++|+++..|++++ ++++++++++.++++|++.+.
T Consensus 158 ~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~ 235 (393)
T TIGR02819 158 LEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVD 235 (393)
T ss_pred cccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEe
Confidence 346678889999999884 578899999999775 9999999999999999754 456778899999999997543
Q ss_pred eCCCCcHHHHHHHHhCCCCccEEEECCChh---------------hHHHhhhccccCCEEEEEecCC
Q 024011 190 NYKTEDFVARVKEETGGKGVDVILDCMGAS---------------YFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~---------------~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.....++.+.+.+.+++.++|++||++|.. .+..+++.++++|+++.+|...
T Consensus 236 ~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~ 302 (393)
T TIGR02819 236 LSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYV 302 (393)
T ss_pred cCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecC
Confidence 333456667777777777899999999974 5888999999999999999863
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.4e-38 Score=274.16 Aligned_cols=254 Identities=21% Similarity=0.276 Sum_probs=204.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCC--CCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||+++++..+ ++ +++++.|.|+|+++||+|||.++|||++|.+.+.|.++.. ...|.++|||++|+|+++|++ +.
T Consensus 1 mka~~~~~~~-~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVKPGK-PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEecCCC-CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 8999998543 33 8999999999999999999999999999999998875422 235789999999999999999 99
Q ss_pred CCCCCEEEEEe------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHH
Q 024011 79 WKVGDQVCALL------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128 (274)
Q Consensus 79 ~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~ 128 (274)
|++||||+... .+|+|+||++++.+.++++|++++ + ++++..++.+++
T Consensus 78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~~~ 155 (355)
T cd08230 78 LSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSVVE 155 (355)
T ss_pred CCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHHHH
Confidence 99999998642 248899999999999999999998 4 444556666655
Q ss_pred HHHHh------hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec---ChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 129 STVFM------TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 129 ~~l~~------~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
.++.. ....++|++++|+|+ |++|++++|+++..|++|+++++ ++++++.++++|++.+ +...+++.+
T Consensus 156 ~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~~~~~~- 232 (355)
T cd08230 156 KAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV-NSSKTPVAE- 232 (355)
T ss_pred HHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe-cCCccchhh-
Confidence 54422 123578999999996 99999999999999999999998 5788899999999874 554444433
Q ss_pred HHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCC-Cccccc----hhhHhhcceEEEEeecc
Q 024011 200 VKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELN----ITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~----~~~~~~~~~~i~g~~~~ 265 (274)
... ..++|+|||++|.. .+..+++.++++|+++.+|...+ ....++ ...++.+++++.|+...
T Consensus 233 -~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~ 301 (355)
T cd08230 233 -VKL--VGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNA 301 (355)
T ss_pred -hhh--cCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCC
Confidence 111 24699999999975 57889999999999999998765 233444 34577789999998654
No 23
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=8.7e-38 Score=270.30 Aligned_cols=258 Identities=33% Similarity=0.489 Sum_probs=223.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC---CC-------CCCCCCCCCCceeEEEE
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY---PP-------PKGASPYPGLECSGTIL 70 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~---~~-------~~~~p~~~G~e~~G~V~ 70 (274)
|||+++.+++ .+++++.+.|+|+++||+||+.++++|++|.+.+.+.. +. ....|.++|||++|+|+
T Consensus 1 mka~~~~~~~---~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYHGRK---DIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEecCC---ceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 9999998765 38999999999999999999999999999998765421 10 11257899999999999
Q ss_pred EecCCCCCCCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcc
Q 024011 71 SVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (274)
Q Consensus 71 ~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (274)
++|++++.|++||+|++.. .+|+|++|+.++.+.++++|+++++++++.+ .
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~ 156 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-E 156 (351)
T ss_pred EeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-c
Confidence 9999999999999998621 1589999999999999999999999998755 6
Q ss_pred hHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHH
Q 024011 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (274)
Q Consensus 123 ~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (274)
+..++|+++ ...++++|++++|+|+ |++|.+++|+++..|+ +|+++++++++.+.++++|++.+++.+..++.+.+.
T Consensus 157 ~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~ 234 (351)
T cd08233 157 PLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVR 234 (351)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHH
Confidence 788999998 7788999999999986 8999999999999999 899999999999999999999999988888888888
Q ss_pred HHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 202 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+.++++++|++||+.|. ..+..++++++++|+++.+|... ....++...++.+++++.|+...
T Consensus 235 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~ 298 (351)
T cd08233 235 KLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICY 298 (351)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEecc
Confidence 88877789999999985 46788999999999999999876 34567777788889999988654
No 24
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=8.7e-38 Score=267.62 Aligned_cols=250 Identities=22% Similarity=0.294 Sum_probs=212.2
Q ss_pred EEEEcCCCCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 3 AIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 3 a~~~~~~~~~--~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|+.+..++.+ ..+++++.|.|+|+++||+|||.++|+|++|.+.+.|.++.. ..|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFA 79 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccC
Confidence 3556666654 469999999999999999999999999999999998876432 3478999999999999999999999
Q ss_pred CCCEEEEE----------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|+.. ..+|+|+||+.+|.+.++++|+++++++++.+.++..++|+++.
T Consensus 80 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~ 159 (329)
T TIGR02822 80 VGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL 159 (329)
T ss_pred CCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHH
Confidence 99999742 12589999999999999999999999999999999999999984
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
..++++|++++|+|+ |++|.+++|+++..|++|+++++++++++.++++|++++++..+.. ..++|.+
T Consensus 160 -~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----------~~~~d~~ 227 (329)
T TIGR02822 160 -RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP----------PEPLDAA 227 (329)
T ss_pred -hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC----------cccceEE
Confidence 578999999999997 9999999999999999999999999999999999999988643211 1358988
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+++.+. ..+..++++++++|+++.+|........++...++.+++++.+++..
T Consensus 228 i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~ 281 (329)
T TIGR02822 228 ILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSN 281 (329)
T ss_pred EECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecC
Confidence 888765 45788999999999999999754333356667777888999987653
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.2e-37 Score=270.64 Aligned_cols=256 Identities=27% Similarity=0.362 Sum_probs=213.8
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
||+.+...+.+..++..+++.|+|+++||+|||.++|||++|++.+.|.++. ...|.++|||++|+|+++|+++++|++
T Consensus 6 ~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~v 84 (375)
T PLN02178 6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKE 84 (375)
T ss_pred eeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCC
Confidence 5666665555556888899999999999999999999999999999886532 235789999999999999999999999
Q ss_pred CCEEEEE-----e------------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHH
Q 024011 82 GDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 82 Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
||+|+.. + .+|+|+||+.+|.+.++++|+++++++++++.+...+
T Consensus 85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t 164 (375)
T PLN02178 85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT 164 (375)
T ss_pred CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence 9999741 1 1589999999999999999999999999999999999
Q ss_pred HHHHHHhhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 127 VWSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 127 a~~~l~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
+|+++..... .++|++++|.|+ |++|++++|+++..|++|+++++++++ .+.++++|++++++..+. +.+.+.+
T Consensus 165 a~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~---~~v~~~~ 240 (375)
T PLN02178 165 VYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS---QKMKEAV 240 (375)
T ss_pred HHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH---HHHHHhh
Confidence 9998855433 368999999986 999999999999999999998877554 677789999988875542 3444544
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+ ++|++||++|.. .+..++++++++|+++.+|.... ...++...++.+++++.|+...
T Consensus 241 ~--~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~ 299 (375)
T PLN02178 241 G--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK-PLDLPIFPLVLGRKMVGGSQIG 299 (375)
T ss_pred C--CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC-CCccCHHHHHhCCeEEEEeCcc
Confidence 3 599999999976 57889999999999999997643 3467778888899999998764
No 26
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.5e-37 Score=267.11 Aligned_cols=258 Identities=33% Similarity=0.488 Sum_probs=211.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCC-CCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++..+++. .++++.+.|.+.|+||+|||.++|||+||++.+++..+... .+. ++|||++|+|+++| .++.+
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~-~~~~i~GHE~~G~V~evG-~~~~~ 76 (350)
T COG1063 1 MKAAVVYVGGGD--VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVP-PGDIILGHEFVGEVVEVG-VVRGF 76 (350)
T ss_pred CceeEEEecCCc--cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCC-CCCcccCccceEEEEEec-cccCC
Confidence 888888877653 33666666668999999999999999999999999765433 233 89999999999999 77889
Q ss_pred CCCCEEEEEe--------------------------------cCCeeeeEEeeeCCCe-EECCCCCCHHhhccCcchHHH
Q 024011 80 KVGDQVCALL--------------------------------GGGGYAEKVAVPAGQV-LPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 80 ~~Gd~V~~~~--------------------------------~~g~~~~~~~~~~~~~-~~~p~~~~~~~aa~l~~~~~~ 126 (274)
++||||+... .+|+|+||+.+|.+.+ .++|+++ +.+.+++..++.+
T Consensus 77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~ 155 (350)
T COG1063 77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLAT 155 (350)
T ss_pred CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhh
Confidence 9999997521 2589999999997554 5557887 5555568899999
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHh
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
++++.......+++.+++|+|+ |++|++++++++..|+ +|+++++++++++.+++ .+++.+.+...++....+.+.+
T Consensus 156 ~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t 234 (350)
T COG1063 156 AYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELT 234 (350)
T ss_pred hhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHh
Confidence 9877545555666669999997 9999999999999998 78888999999999998 6666666655556677777888
Q ss_pred CCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++.++|++|+|+|... +..+++.++++|+++.+|........++...++.+++++.|++.
T Consensus 235 ~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~ 295 (350)
T COG1063 235 GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLR 295 (350)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccC
Confidence 8889999999999654 78899999999999999998765335778889999999999965
No 27
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8e-38 Score=251.31 Aligned_cols=258 Identities=26% Similarity=0.337 Sum_probs=225.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
+||++..+++.| |.++++.+.+|+.+||+||+.++++|++|.+.+.|..+ ...+|.++|||.+|+|+.+|++|+.++
T Consensus 8 CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~-~~~fP~IlGHEaaGIVESvGegV~~vk 84 (375)
T KOG0022|consen 8 CKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP-EGLFPVILGHEAAGIVESVGEGVTTVK 84 (375)
T ss_pred EeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCc-cccCceEecccceeEEEEecCCccccC
Confidence 689999999988 99999999999999999999999999999999999874 446799999999999999999999999
Q ss_pred CCCEEEEEec-------------------------------------------------CCeeeeEEeeeCCCeEECCCC
Q 024011 81 VGDQVCALLG-------------------------------------------------GGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (274)
+||+|+.+.. -.+|+||.+++...++++++.
T Consensus 85 ~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~ 164 (375)
T KOG0022|consen 85 PGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPS 164 (375)
T ss_pred CCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCC
Confidence 9999986320 138999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
.+++.++.|.+...|.|.|..+.+++++|+++.|+|- |++|+++++-++..|+ +++.++.++++.+.++++|+...+|
T Consensus 165 aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN 243 (375)
T KOG0022|consen 165 APLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN 243 (375)
T ss_pred CChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence 9999999999999999999999999999999999996 9999999999999999 9999999999999999999999887
Q ss_pred CCC--CcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccC-CEEEEEecCCC-CccccchhhHhhcceEEEEeec
Q 024011 191 YKT--EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
..+ ....+.+.+.++ .|+|+-|+|.|... +.+++.+...+ |+-+.+|.... ....+.+..++. +.++.|+.-
T Consensus 244 p~d~~~~i~evi~EmTd-gGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~Gs~F 320 (375)
T KOG0022|consen 244 PKDLKKPIQEVIIEMTD-GGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKGSAF 320 (375)
T ss_pred hhhccccHHHHHHHHhc-CCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc-ccEEEEEec
Confidence 763 236677777887 58999999999854 78888888777 99999998764 344555555554 666666653
No 28
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=3.8e-37 Score=265.89 Aligned_cols=255 Identities=25% Similarity=0.320 Sum_probs=212.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++++++. +++++.|.|.| +++||+|||.++++|++|.+.+..... ...|.++|||++|+|+++|+++++|
T Consensus 1 Mka~~~~~~~~---~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~ 75 (347)
T PRK10309 1 MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDDL 75 (347)
T ss_pred CceEEEeCCCc---eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCCC
Confidence 99999998664 89999999987 699999999999999999975432111 1247899999999999999999999
Q ss_pred CCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 80 KVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
++||+|+++. .+|+|++|+.+|.+.++++|+++++++++.+. ++.++++++
T Consensus 76 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~- 153 (347)
T PRK10309 76 HPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF- 153 (347)
T ss_pred CCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-
Confidence 9999998752 25899999999999999999999999998663 566677775
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc-
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD- 210 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d- 210 (274)
....+++|++++|+|+ |++|++++|+++..|++ |+++++++++++.++++|++.+++.+..+ .+++.+.+.+.++|
T Consensus 154 ~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~-~~~~~~~~~~~~~d~ 231 (347)
T PRK10309 154 HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS-APQIQSVLRELRFDQ 231 (347)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC-HHHHHHHhcCCCCCe
Confidence 5567889999999985 99999999999999996 78888999999999999999988876655 55677777666788
Q ss_pred EEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccc---hhhHhhcceEEEEeecc
Q 024011 211 VILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELN---ITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 211 ~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~ 265 (274)
++|||+|.. .+..++++++++|+++.+|...+. ..++ +..++.+++++.|++..
T Consensus 232 ~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 289 (347)
T PRK10309 232 LILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-LHLTSATFGKILRKELTVIGSWMN 289 (347)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-cccChhhhhHHhhcCcEEEEEecc
Confidence 999999974 578899999999999999976543 2232 23567889999998753
No 29
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=6.4e-37 Score=263.56 Aligned_cols=258 Identities=25% Similarity=0.331 Sum_probs=212.4
Q ss_pred EEEEEcCCCCCcceEEEeecC----CCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCce--eEEEEEecCC
Q 024011 2 KAIVITQPGSPEVLQLQEVED----PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC--SGTILSVGKN 75 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~----~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG~~ 75 (274)
|++....+. ++.|++++.+. |+|++|||||||++++||+.|++...|........|.++|+++ .|.+..+|++
T Consensus 9 ~~~~~~~~~-~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 9 KAYVTGFPK-ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred ecCCCCCCC-ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 455533333 45699999987 8899999999999999999999988875432124577889865 3455567888
Q ss_pred CCCCCCCCEEEEEecCCeeeeEEeeeC-CCeEECC-CCCCHH-hhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchH
Q 024011 76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVP-SGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152 (274)
Q Consensus 76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~i 152 (274)
++.|++||+|+++ |+|+||+++|. ..++++| ++++++ +++++++++.|+|+++.+..++++|++++|+|++|++
T Consensus 88 v~~~~vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~v 164 (338)
T cd08295 88 NPDFKVGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAV 164 (338)
T ss_pred CCCCCCCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence 8899999999876 68999999999 7999995 678886 7888999999999999888899999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCC-CcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcccc
Q 024011 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (274)
Q Consensus 153 G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (274)
|.+++|+|+..|++|+++++++++.+.+++ +|++.+++++. .++.+.+.+.++ .++|++||+.|+..+..+++++++
T Consensus 165 G~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvd~v~d~~g~~~~~~~~~~l~~ 243 (338)
T cd08295 165 GQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NGIDIYFDNVGGKMLDAVLLNMNL 243 (338)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CCcEEEEECCCHHHHHHHHHHhcc
Confidence 999999999999999999999999999988 99999988654 467777777665 689999999998888999999999
Q ss_pred CCEEEEEecCCCCcc-----ccchhhHhhcceEEEEeec
Q 024011 231 DGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 231 ~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~g~~~ 264 (274)
+|+++.+|....... ..+...++.+++++.+++.
T Consensus 244 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 282 (338)
T cd08295 244 HGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLV 282 (338)
T ss_pred CcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEe
Confidence 999999987543221 1234556677788887553
No 30
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.5e-37 Score=266.18 Aligned_cols=256 Identities=25% Similarity=0.409 Sum_probs=216.7
Q ss_pred EEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCC
Q 024011 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD 83 (274)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 83 (274)
+++++++++ +++++.|.|.|+++||+|||.++|+|++|++.+.+........|.++|||++|+|+++|+++..+ +||
T Consensus 2 ~~~~~~g~~--~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCC--ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 466666654 88899999999999999999999999999998754433223457899999999999999999877 999
Q ss_pred EEEEE---------------------------ecCCeeeeEEeeeCCCeEECCC------CCCHHhhccCcchHHHHHHH
Q 024011 84 QVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPS------GVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 84 ~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~l~~~~~~a~~~ 130 (274)
+|+.. ..+|+|+||+.+|.+.++++|+ ++++++++.+.+++.++|++
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a 158 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA 158 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence 99862 1358999999999999999999 89999999899999999999
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC---cHHHHHHHHhCCC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVARVKEETGGK 207 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~ 207 (274)
+. ...+++|++++|+|+ |++|++++|+++..|++|+++++++++++.++++|++.+++.... ++.+.+.+.+++.
T Consensus 159 ~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~ 236 (349)
T TIGR03201 159 AV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKAR 236 (349)
T ss_pred HH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccC
Confidence 85 478899999999998 999999999999999999999999999999999999988876553 4566677777767
Q ss_pred Ccc----EEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 208 GVD----VILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 208 ~~d----~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++| .+||++|... ...++++++++|+++.+|..... ..+++..++.+++++.|++..
T Consensus 237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~~~ 298 (349)
T TIGR03201 237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNWGC 298 (349)
T ss_pred CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEecC
Confidence 786 8999999754 66789999999999999986543 356667777778888888753
No 31
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-36 Score=260.44 Aligned_cols=264 Identities=42% Similarity=0.726 Sum_probs=231.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..+++...+++++.+.|++.++||+||+.++++|+.|.....+.++.....|.++|||++|+|+++|++++.++
T Consensus 2 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 81 (334)
T PTZ00354 2 MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFK 81 (334)
T ss_pred cEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence 99999999887667888888888889999999999999999999998876654444567899999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++..+|+|++|++++.+.++++|+++++++++.+..+..++|+++.....+++|++++|+|++|++|+++++++
T Consensus 82 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a 161 (334)
T PTZ00354 82 EGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLA 161 (334)
T ss_pred CCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHH
Confidence 99999998667999999999999999999999999999999999999999878788999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCc-HHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
+..|++++++++++++.+.++++|.+.+++....+ +.+.+.+.++++++|+++++.|+..+...++++.++|+++.++.
T Consensus 162 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~ 241 (334)
T PTZ00354 162 EKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGF 241 (334)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEec
Confidence 99999988899999999999999998888776554 77778877777789999999998888899999999999999986
Q ss_pred CCCCccc-cchhhHhhcceEEEEeec
Q 024011 240 QGGAKTE-LNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 240 ~~~~~~~-~~~~~~~~~~~~i~g~~~ 264 (274)
....... ++...++.++.++.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (334)
T PTZ00354 242 MGGAKVEKFNLLPLLRKRASIIFSTL 267 (334)
T ss_pred CCCCcccccCHHHHHhhCCEEEeeec
Confidence 5543333 666667777778877653
No 32
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=8.8e-37 Score=263.00 Aligned_cols=263 Identities=30% Similarity=0.423 Sum_probs=227.4
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCC-CeEEEEEeeeecChhhhHhhcCCCCCCCC----CCCCCCCceeEEEEEecC
Q 024011 1 MKAIVITQPGSP-EVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKG----ASPYPGLECSGTILSVGK 74 (274)
Q Consensus 1 m~a~~~~~~~~~-~~~~~~~~~~~~~~~-~ev~V~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~vG~ 74 (274)
|||++++.++.+ +.+++++.|.|.|.+ +||+||+.++++|++|...+.|..+.... .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 999999988765 468899999998887 99999999999999999998886643222 567899999999999999
Q ss_pred CCCCCCCCCEEEEEe-cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHH
Q 024011 75 NVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153 (274)
Q Consensus 75 ~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG 153 (274)
++..|++||+|++.. .+|+|++|+.++.+.++++|+++++++++.++++..++|+++.....+++|++++|+|++|++|
T Consensus 81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg 160 (341)
T cd08290 81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVG 160 (341)
T ss_pred CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHH
Confidence 999999999999875 3689999999999999999999999999999999999999987777889999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEecCh----hhHHHHHHcCCCEEEeCCCC---cHHHHHHHHhCCCCccEEEECCChhhHHHhhh
Q 024011 154 TFAIQMGKCQGVRVFVTAGSE----EKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGVDVILDCMGASYFQRNLG 226 (274)
Q Consensus 154 ~~~~~~~~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~ 226 (274)
++++++++..|++++++++++ ++.+.++++|++.+++.+.. ++...+....++ ++|.++|+.|+......++
T Consensus 161 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~ 239 (341)
T cd08290 161 QAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGKSATELAR 239 (341)
T ss_pred HHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcHhHHHHHH
Confidence 999999999999999988776 56778888999998887665 677777776665 7999999999877788899
Q ss_pred ccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 227 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+++++|+++.+|........++...++.++.++.+...
T Consensus 240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (341)
T cd08290 240 LLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWL 277 (341)
T ss_pred HhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEec
Confidence 99999999999865443345566566788888888764
No 33
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=3e-37 Score=265.66 Aligned_cols=244 Identities=19% Similarity=0.245 Sum_probs=198.1
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCC---CCCCCCCCCceeEEEEEecCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP---KGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|+++++++++ +++++.+.|+ +++||+|||.++|||++|++.+.|.+... ..+|.++|||++|+|+++|.+ .
T Consensus 4 ~~~~~~~~~~---~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 4 QVYRLVRPKF---FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cceEEeccce---EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 5778876654 9999999995 99999999999999999999999875321 246899999999999998764 7
Q ss_pred CCCCCEEEEEe------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhh
Q 024011 79 WKVGDQVCALL------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134 (274)
Q Consensus 79 ~~~Gd~V~~~~------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~ 134 (274)
|++||||+... .+|+|+||+.+|.+.++++|+++++++|+ +..+++++++++...
T Consensus 78 ~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~ 156 (341)
T cd08237 78 YKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRF 156 (341)
T ss_pred cCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHH
Confidence 99999997631 35899999999999999999999999877 556888899888543
Q ss_pred --cCCCCCCEEEEecCCchHHHHHHHHHHH-cC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 135 --SHLSPGESFLVHGGSSGIGTFAIQMGKC-QG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 135 --~~~~~g~~vlI~Ga~g~iG~~~~~~~~~-~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
..+++|++++|+|+ |++|++++|++++ .| .+|+++++++++++.+++.+.+...+ + . ....++|
T Consensus 157 ~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~----~---~~~~g~d 224 (341)
T cd08237 157 EQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----D----I---PEDLAVD 224 (341)
T ss_pred hhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----h----h---hhccCCc
Confidence 35688999999996 9999999999986 55 58999999999999888766543221 1 1 1123599
Q ss_pred EEEECCCh----hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 211 VILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 211 ~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
++||++|+ ..+..+++.++++|+++.+|.... ...++...++.+++++.|+...
T Consensus 225 ~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~ 282 (341)
T cd08237 225 HAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSSRS 282 (341)
T ss_pred EEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC-CcccCHHHHhhCceEEEEeccc
Confidence 99999995 247889999999999999997543 3466777788899999998653
No 34
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.3e-36 Score=262.35 Aligned_cols=260 Identities=29% Similarity=0.475 Sum_probs=222.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC---
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR--- 78 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~--- 78 (274)
|++++.++++ .+++++.+.|.|+++||+||+.++++|++|++...|.++. ...|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 78 (361)
T cd08231 2 RAAVLTGPGK--PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDVA 78 (361)
T ss_pred eEEEEcCCCC--CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCcccccc
Confidence 7899998874 4999999999999999999999999999999998887652 345789999999999999999986
Q ss_pred ---CCCCCEEEEEe----------------------------------cCCeeeeEEeeeCC-CeEECCCCCCHHhhccC
Q 024011 79 ---WKVGDQVCALL----------------------------------GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF 120 (274)
Q Consensus 79 ---~~~Gd~V~~~~----------------------------------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~l 120 (274)
|++||+|+.+. .+|+|++|+.++.+ .++++|++++.++++.+
T Consensus 79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 99999998762 25899999999986 79999999999999988
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcH---
Q 024011 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF--- 196 (274)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--- 196 (274)
++++.++|+++.+....++|+++||+|+ |++|++++++|+..|+ +|+++++++++.+.++++|.+.+++.+..++
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 237 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQR 237 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHH
Confidence 8999999999977776779999999985 9999999999999999 9999999999999999999988887665433
Q ss_pred HHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEeecc
Q 024011 197 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
...+.+.++++++|++||+.|+ ..+..+++.++++|+++.+|.... ....++...++.+++++.+++..
T Consensus 238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
T cd08231 238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNY 308 (361)
T ss_pred HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccC
Confidence 2467777777789999999986 457888999999999999987642 23345555568888999888754
No 35
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=2.9e-36 Score=258.96 Aligned_cols=255 Identities=31% Similarity=0.501 Sum_probs=222.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++ .+++++.|.|+++++||+||+.++++|++|+..+.|..+. ...|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~vG~~v~~~~ 77 (333)
T cd08296 1 YKAVQVTEPGG--PLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRIDAVGEGVSRWK 77 (333)
T ss_pred CeEEEEccCCC--CceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEEEECCCCccCC
Confidence 99999998754 3889999999999999999999999999999998886543 23578899999999999999999999
Q ss_pred CCCEEEE----------------------------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|++ +..+|++++|+.++...++++|+++++++++.++++..++|+++.
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~ 157 (333)
T cd08296 78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR 157 (333)
T ss_pred CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence 9999986 222588999999999999999999999999999999999999985
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.. .++++++++|+| +|++|.+++++++..|++++++++++++++.++++|++.+++....++.+.+.+. .++|++
T Consensus 158 ~~-~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~---~~~d~v 232 (333)
T cd08296 158 NS-GAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL---GGAKLI 232 (333)
T ss_pred hc-CCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc---CCCCEE
Confidence 54 889999999999 6999999999999999999999999999999999999998888776776666654 359999
Q ss_pred EECCC-hhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 213 LDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 213 i~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|+.| ...+...++.++++|+++.+|... ....++...++.+++++.++..
T Consensus 233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~ 284 (333)
T cd08296 233 LATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPS 284 (333)
T ss_pred EECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCc
Confidence 99986 456788999999999999999865 3345666677788999998764
No 36
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=6.6e-36 Score=255.62 Aligned_cols=263 Identities=33% Similarity=0.508 Sum_probs=228.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|||+++++++.+..+++.+.+.|.+.++||+||+.++++|++|++...|..+. ....|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 89999998877777888888887789999999999999999999988775432 2345678999999999999999999
Q ss_pred CCCCCEEEEEe--cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHH
Q 024011 79 WKVGDQVCALL--GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156 (274)
Q Consensus 79 ~~~Gd~V~~~~--~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~ 156 (274)
+++||+|+++. .+|+|++|+.++...++++|+++++++++.+++.++++| ++.+..+++++++++|+|+++++|.++
T Consensus 81 ~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~ 159 (324)
T cd08244 81 AWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLL 159 (324)
T ss_pred CCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHH
Confidence 99999999875 268999999999999999999999999999999999995 455778899999999999999999999
Q ss_pred HHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEE
Q 024011 157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 157 ~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~ 236 (274)
+++++..|++++++++++++.+.+++++.+.+++....++.+.+.+.++++++|+++|+.|+......+++++++|+++.
T Consensus 160 ~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~ 239 (324)
T cd08244 160 VQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLT 239 (324)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEE
Confidence 99999999999999999999999999999888888777788888877777789999999998878889999999999999
Q ss_pred EecCCCCccccchhhHhhcceEEEEeec
Q 024011 237 IGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 237 ~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|........++...++.+++++.++..
T Consensus 240 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08244 240 YGWASGEWTALDEDDARRRGVTVVGLLG 267 (324)
T ss_pred EecCCCCCCccCHHHHhhCCcEEEEeec
Confidence 9876544334555566778888887654
No 37
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=5.9e-37 Score=260.24 Aligned_cols=242 Identities=18% Similarity=0.266 Sum_probs=194.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecC-hhhhHhhcCCCCCC--CCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALN-RADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
||++++.+++ .+++++.+.|+|++|||+|||.++||| ++|++.+.|.++.. ..+|.++|||++|+|+++|+++
T Consensus 2 ~ka~~~~~~~---~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v- 77 (308)
T TIGR01202 2 TQAIVLSGPN---QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT- 77 (308)
T ss_pred ceEEEEeCCC---eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence 7999998655 499999999999999999999999996 69999888876532 2568999999999999999998
Q ss_pred CCCCCCEEEEEe---------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecC
Q 024011 78 RWKVGDQVCALL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148 (274)
Q Consensus 78 ~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga 148 (274)
.|++||||+... .+|+|+||+.+|.+.++++|++++++. +.+ +++.++|+++.+ . ..++++++|+|+
T Consensus 78 ~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~~~~~vlV~G~ 153 (308)
T TIGR01202 78 GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EVKVLPDLIVGH 153 (308)
T ss_pred CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-ccCCCcEEEECC
Confidence 699999998632 159999999999999999999999865 434 567899999855 2 336889999985
Q ss_pred CchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhh
Q 024011 149 SSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLG 226 (274)
Q Consensus 149 ~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~ 226 (274)
|++|++++|+++.+|++ |+++++++++++.+... .++|.... .+.++|++||++|.. .+..+++
T Consensus 154 -G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----------~~~g~Dvvid~~G~~~~~~~~~~ 219 (308)
T TIGR01202 154 -GTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD----------PRRDYRAIYDASGDPSLIDTLVR 219 (308)
T ss_pred -CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc----------cCCCCCEEEECCCCHHHHHHHHH
Confidence 99999999999999997 55566666676655442 33332211 234699999999985 4788999
Q ss_pred ccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 227 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+++++|+++++|.... ...+++..++.+++++.++...
T Consensus 220 ~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~~~~~~ 257 (308)
T TIGR01202 220 RLAKGGEIVLAGFYTE-PVNFDFVPAFMKEARLRIAAEW 257 (308)
T ss_pred hhhcCcEEEEEeecCC-CcccccchhhhcceEEEEeccc
Confidence 9999999999998654 3466777788888999887653
No 38
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.7e-36 Score=261.21 Aligned_cols=255 Identities=24% Similarity=0.326 Sum_probs=214.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
+++++++.+++. +++++.+.|+|+++||+|||.++++|++|++.+.|.++. ...|.++|||++|+|+++|+++++|+
T Consensus 10 ~~~~~~~~~~~~--~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~~~~ 86 (357)
T PLN02514 10 TTGWAARDPSGH--LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_pred EEEEEEecCCCC--ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCccccc
Confidence 578899988864 899999999999999999999999999999998886543 23578999999999999999999999
Q ss_pred CCCEEEEE-----------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHH
Q 024011 81 VGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (274)
Q Consensus 81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~ 125 (274)
+||+|+.. ..+|+|+||+.+|...++++|+++++++++.+++++.
T Consensus 87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 166 (357)
T PLN02514 87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV 166 (357)
T ss_pred CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence 99999741 1258999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
++|+++......++|++++|+|+ |++|++++|+++..|++++++++++++++.+ +++|++.+++.... +.+.+.+
T Consensus 167 ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~---~~~~~~~ 242 (357)
T PLN02514 167 TVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA---AEMQEAA 242 (357)
T ss_pred HHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh---HHHHHhc
Confidence 99999876666689999999975 9999999999999999999888887776554 56999877654432 2344443
Q ss_pred CCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 205 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
. ++|++||+.|. ..++.++++++++|+++.+|.... ...++...++.+++++.|++..
T Consensus 243 ~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~ 301 (357)
T PLN02514 243 D--SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIG 301 (357)
T ss_pred C--CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecC
Confidence 2 59999999996 457889999999999999998653 3467777788889999998754
No 39
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.9e-36 Score=265.50 Aligned_cols=261 Identities=25% Similarity=0.310 Sum_probs=209.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhh-cCCCCC-----CCCCCCCCCCceeEEEEEecC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPP-----PKGASPYPGLECSGTILSVGK 74 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~-~g~~~~-----~~~~p~~~G~e~~G~V~~vG~ 74 (274)
||++++.+++. +++++.|.|+|+++||+|||.++|||++|++.+ .|.... ....|.++|||++|+|+++|+
T Consensus 3 ~~a~~~~~~~~---l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 3 TKAWRMYGKGD---LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred cEEEEEEcCCc---eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 78999987764 999999999999999999999999999999976 443211 013578999999999999999
Q ss_pred CCC-CCCCCCEEEEEe----------------cCCeeeeEEeeeCC----CeEECCCCCCHHhhccCcchHHH---HHHH
Q 024011 75 NVS-RWKVGDQVCALL----------------GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVACT---VWST 130 (274)
Q Consensus 75 ~~~-~~~~Gd~V~~~~----------------~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~~---a~~~ 130 (274)
+++ .|++||||+... .+|+|+||+++|.+ .++++|+++++++++.+. ++.+ ++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a 158 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTA 158 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhh
Confidence 998 699999998742 25899999999987 689999999999988542 3222 3333
Q ss_pred H--------HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC---eEEEEecChhhHHHHHHc--------CCC-EEEe
Q 024011 131 V--------FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKDL--------GAD-VCIN 190 (274)
Q Consensus 131 l--------~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~---~v~~~~~~~~~~~~~~~~--------g~~-~~~~ 190 (274)
+ .+..++++|++++|+|++|++|++++|+++..|+ +|+++++++++++.++++ |++ .+++
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~ 238 (410)
T cd08238 159 NYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVN 238 (410)
T ss_pred cccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEEC
Confidence 2 2456789999999999889999999999999864 799999999999999886 655 4566
Q ss_pred CCC-CcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCC-C-CccccchhhHhhcceEEEEeecc
Q 024011 191 YKT-EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG-G-AKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 191 ~~~-~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~-~-~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
... .++.+.+.+.+++.++|++|+++|. ..+..++++++++|+++.++... . ....++...++.+++++.|+...
T Consensus 239 ~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 317 (410)
T cd08238 239 PATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG 317 (410)
T ss_pred CCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCC
Confidence 544 5677777777877789999999985 55788999999999888775432 1 12457777888899999998753
No 40
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=5.4e-36 Score=257.98 Aligned_cols=258 Identities=29% Similarity=0.459 Sum_probs=223.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC--CCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++++++++ +++.+.+.|++.++||+||+.++++|++|.....|.++ ....+|.++|+|++|+|+++|+++..
T Consensus 1 ~ka~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccCCCC--ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 899999987654 88889999999999999999999999999999888765 23456789999999999999999999
Q ss_pred CCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
|++||+|+++. .+|+|++|+.++.+.++++|+++++++++.++..+.+||+++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l 158 (340)
T cd05284 79 LKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158 (340)
T ss_pred CcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 99999998763 258999999999999999999999999999999999999998
Q ss_pred Hhh-cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCc
Q 024011 132 FMT-SHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 132 ~~~-~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (274)
... ..+.++++++|+|+ +++|++++++++..| .+|+++++++++.+.++++|.+++++.+.. +.+++.+..++.++
T Consensus 159 ~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~~ 236 (340)
T cd05284 159 KKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRGA 236 (340)
T ss_pred HHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCCC
Confidence 665 46788999999996 669999999999999 799999999999999999999998887776 77788877776789
Q ss_pred cEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 210 d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
|+++|+.|+ ......+++++++|+++.+|.... ..++....+.+++++.++..
T Consensus 237 dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (340)
T cd05284 237 DAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLW 290 (340)
T ss_pred CEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEec
Confidence 999999996 568889999999999999987653 34444444567888877653
No 41
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=7.7e-36 Score=259.28 Aligned_cols=258 Identities=30% Similarity=0.465 Sum_probs=224.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++++ +++++.+.|.+.++||+||+.++++|++|++...|.++ ...|.++|||++|+|+++|++++.++
T Consensus 3 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08278 3 TTAAVVREPGGP--FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAGVVEAVGSAVTGLK 78 (365)
T ss_pred cEEeeeccCCCc--ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeEEEEEeCCCcccCC
Confidence 899999987654 78899999999999999999999999999999888664 23578899999999999999999999
Q ss_pred CCCEEEEE-------------------------------------------------ecCCeeeeEEeeeCCCeEECCCC
Q 024011 81 VGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 81 ~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~ 111 (274)
+||+|++. ...|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 79 PGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99999851 12478999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEe
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (274)
+++++++.++++..+++.++.....+++|++++|+|+ |++|++++++++..|+ +++++++++++.+.+++++++.+++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 9999999999999999998878888999999999975 9999999999999999 5888888999999889999999888
Q ss_pred CCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCC-CCccccchhhHhhcceEEEEeec
Q 024011 191 YKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.+..++.+.+.+.+ ++++|+++|++|. ..+..+++.++++|+++.+|... .....++...++.+++++.++..
T Consensus 238 ~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (365)
T cd08278 238 PKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIE 312 (365)
T ss_pred CCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeec
Confidence 87777878888777 6689999999986 55788999999999999998753 23345666666678888887653
No 42
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.1e-35 Score=253.34 Aligned_cols=265 Identities=60% Similarity=0.979 Sum_probs=233.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++.+++.++.+++++.+.|.+.++||+||+.++++|++|.+...+.++.....|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 99999999887777888888888889999999999999999999988776654445678999999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++..+|+|++|+.++.+.++++|+++++++++.+..+..++++++.+...+.++++++|+|+++++|+++++++
T Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~ 160 (323)
T cd05276 81 VGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLA 160 (323)
T ss_pred CCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHH
Confidence 99999998767999999999999999999999999999999999999999877788999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++++++++++++.+.+++++.+.+++....++.+.+.+...+.++|+++++.|+......+++++++|+++.++..
T Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~ 240 (323)
T cd05276 161 KALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLL 240 (323)
T ss_pred HHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecC
Confidence 99999999999999999888888888888877767777777777667899999999988788889999999999999876
Q ss_pred CCCccccchhhHhhcceEEEEeecc
Q 024011 241 GGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
......++...++.+++++.++...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 241 GGAKAELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCCCCCCchHHHHHhCCeEEEeecc
Confidence 5443455666666788888887643
No 43
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=9.5e-36 Score=255.26 Aligned_cols=253 Identities=24% Similarity=0.354 Sum_probs=211.9
Q ss_pred CEEEEEcCC--CCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCC
Q 024011 1 MKAIVITQP--GSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV 76 (274)
Q Consensus 1 m~a~~~~~~--~~~--~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~ 76 (274)
||+|++.++ +++ +.+++++.+.|+|++|||+|||.+++||+.|.+.... ....|.++|+|++|+|++ .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~----~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 3 AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR----LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred ceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc----CCCCCcEecceEEEEEec---CC
Confidence 899999993 554 7799999999999999999999999999987652211 113578899999999985 45
Q ss_pred CCCCCCCEEEEEecCCeeeeEEeeeCC---CeEECCCCCC-----HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecC
Q 024011 77 SRWKVGDQVCALLGGGGYAEKVAVPAG---QVLPVPSGVS-----LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148 (274)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~---~~~~~p~~~~-----~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga 148 (274)
+.|++||+|+++ ++|++|++++.+ .++++|++++ ...+++++.+++|+|+++.+..++++|+++||+|+
T Consensus 76 ~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga 152 (329)
T cd08294 76 SKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGA 152 (329)
T ss_pred CCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 679999999886 479999999999 9999999988 23334678899999999988889999999999999
Q ss_pred CchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcc
Q 024011 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 228 (274)
Q Consensus 149 ~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l 228 (274)
+|++|.+++|+++..|++|+++++++++.+.++++|++.+++.+..++.+.+.+.++ +++|++||+.|+..+...++++
T Consensus 153 ~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~gvd~vld~~g~~~~~~~~~~l 231 (329)
T cd08294 153 AGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DGIDCYFDNVGGEFSSTVLSHM 231 (329)
T ss_pred ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CCcEEEEECCCHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999888888888877665 6799999999998889999999
Q ss_pred ccCCEEEEEecCCCCcc------ccchhhHhhcceEEEEeec
Q 024011 229 NIDGRLFIIGTQGGAKT------ELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 229 ~~~g~~v~~g~~~~~~~------~~~~~~~~~~~~~i~g~~~ 264 (274)
+++|+++.+|....... ......+..+++++.++..
T Consensus 232 ~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 273 (329)
T cd08294 232 NDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIV 273 (329)
T ss_pred ccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEh
Confidence 99999999985432110 1223446667788887653
No 44
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=3.7e-36 Score=259.57 Aligned_cols=226 Identities=22% Similarity=0.301 Sum_probs=193.2
Q ss_pred CcceEEEeecCCCCC-CCeEEEEEeeeecChhhhHhhcCCC--CCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEE
Q 024011 12 PEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL 88 (274)
Q Consensus 12 ~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~ 88 (274)
++.+++++.+.|+|. +|||+|||.++|||+.|........ .....+|.++|||++|+|+++|+++++|++||+|+++
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 367899999999874 9999999999999999864332111 1112357789999999999999999999999999876
Q ss_pred ecCCeeeeEEeeeCCCeEECCCCCCHHh----hccCcchHHHHHHHHHhhcCCCCC--CEEEEecCCchHHHHHHHHHHH
Q 024011 89 LGGGGYAEKVAVPAGQVLPVPSGVSLKD----AAAFPEVACTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKC 162 (274)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~p~~~~~~~----aa~l~~~~~~a~~~l~~~~~~~~g--~~vlI~Ga~g~iG~~~~~~~~~ 162 (274)
. +.|+||++++.+.++++|+++++++ +++++.++.++|+++.+..++++| +++||+|++|++|.+++|+++.
T Consensus 100 ~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~ 177 (345)
T cd08293 100 N--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL 177 (345)
T ss_pred C--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 3 6799999999999999999864332 445778899999998777788876 9999999999999999999999
Q ss_pred cCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 163 QGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 163 ~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.|+ +|+++++++++.+.+++ +|++.+++....++.+.+.+.++ +++|++||++|+..+..++++++++|+++.+|..
T Consensus 178 ~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 178 LGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EGVDVYFDNVGGEISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred cCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CCceEEEECCCcHHHHHHHHHhccCCEEEEEeee
Confidence 999 89999999999988876 99999999888888888887765 6899999999988788999999999999999853
No 45
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-35 Score=257.15 Aligned_cols=260 Identities=31% Similarity=0.472 Sum_probs=218.6
Q ss_pred CEEEEEcCCCCCcceEEEe-ecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC-------------------CCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQE-VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------------------PKGASPY 60 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~-~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~~ 60 (274)
||++++..++.++.+++.+ .+.|.+.+++|+|||.++++|++|.+...|.++. ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 8999999877666677764 4777789999999999999999999988775431 2346789
Q ss_pred CCCceeEEEEEecCCCCCCCCCCEEEEEe-------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCc
Q 024011 61 PGLECSGTILSVGKNVSRWKVGDQVCALL-------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121 (274)
Q Consensus 61 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~ 121 (274)
+|||++|+|+++|+++++|++||+|++.. .+|+|++|+.++.+.++++|+++++++++.+.
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~ 160 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP 160 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence 99999999999999999999999998741 25899999999999999999999999999999
Q ss_pred chHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHH
Q 024011 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (274)
Q Consensus 122 ~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (274)
++..++|+++ ....+++|++++|+|++|++|++++++++..|++++++++++ +.+.++++|++.+.+.......+ .
T Consensus 161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~--~ 236 (350)
T cd08274 161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRDAPLLAD--A 236 (350)
T ss_pred cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHH--H
Confidence 9999999988 677899999999999999999999999999999999888665 77888889987665544444333 4
Q ss_pred HHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 202 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
..+.++++|++||+.|+..+..++++++++|+++.+|........++...++.+++++.++..
T Consensus 237 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (350)
T cd08274 237 KALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTL 299 (350)
T ss_pred HhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeec
Confidence 555667899999999988889999999999999999876443345667777788888887664
No 46
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.4e-35 Score=253.79 Aligned_cols=260 Identities=25% Similarity=0.379 Sum_probs=219.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.+++++.+++++.|.|.++++||+||+.++++|++|+....|.++.....|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 999999999876679999999999999999999999999999999988876543445778999999999998 466799
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCC--C-CCCEEEEecCCch
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--S-PGESFLVHGGSSG 151 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~--~-~g~~vlI~Ga~g~ 151 (274)
+||+|++.. .+|+|++|+.++.+.++++|+++++++++.+++.+.+++.++...... + .+++++|+|++|+
T Consensus 79 ~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~ 158 (325)
T cd05280 79 EGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGG 158 (325)
T ss_pred CCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccH
Confidence 999999863 368999999999999999999999999999999999999988654433 5 3579999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccC
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (274)
+|++++++++..|++|+++++++++.+.++++|++.+++.... .....+...++++|+++|+.|+..+...+++++++
T Consensus 159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~ 236 (325)
T cd05280 159 VGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL--LDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYG 236 (325)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH--HHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999888775432 12333444445799999999988889999999999
Q ss_pred CEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
|+++.+|........++...++.+++++.++..
T Consensus 237 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 237 GVVASCGNAAGPELTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred CEEEEEecCCCCccccccchheeeeeEEEEEEe
Confidence 999999976543334555556678888887654
No 47
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.8e-35 Score=254.94 Aligned_cols=262 Identities=31% Similarity=0.482 Sum_probs=227.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.++ +..+++++.+.|.|.++||+||+.++++|++|...+.+.++.....|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 9999999877 445999999999999999999999999999999998887654444567889999999999999999999
Q ss_pred CCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|+... ..|+|++|+.++.+.++++|+++++++++.++....++|+++.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~ 159 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK 159 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHH
Confidence 999998742 2588999999999999999999999999999999999999986
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
. .+++++++++|+|+++++|++++++++..|++|+++++++++.+.++++|.+.+++.+..++.+.+.+..+++++|++
T Consensus 160 ~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~v 238 (341)
T cd08297 160 K-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAV 238 (341)
T ss_pred h-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEE
Confidence 5 488999999999998889999999999999999999999999999989999998888777888888888877789999
Q ss_pred EECCC-hhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 213 LDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 213 i~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|+.+ .......+++++++|+++.+|........++...++.+++++.+...
T Consensus 239 l~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd08297 239 VVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLV 291 (341)
T ss_pred EEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEecc
Confidence 99665 45678889999999999999876543335566666778888887543
No 48
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.6e-35 Score=253.58 Aligned_cols=259 Identities=23% Similarity=0.354 Sum_probs=215.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..++++..+++++.+.|.|.++||+||+.++++|++|.....+.......+|.++|||++|+|+++| ++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 9999999988777789999999999999999999999999999876643222122347889999999999854 57799
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhc--C-CCCCCEEEEecCCch
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--H-LSPGESFLVHGGSSG 151 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~--~-~~~g~~vlI~Ga~g~ 151 (274)
+||+|++.. .+|+|++|+.++.+.++++|+++++++++.++++..++|.++.... . ...+++++|+|++|+
T Consensus 79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~ 158 (326)
T cd08289 79 PGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGG 158 (326)
T ss_pred CCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCch
Confidence 999999874 3699999999999999999999999999999999999998875432 2 334789999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccC
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (274)
+|.+++++++..|++|+++++++++.+.++++|.+.+++.+.. ..+.+.+. .+.++|+++|+.|+......+++++++
T Consensus 159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~~~~d~vld~~g~~~~~~~~~~l~~~ 236 (326)
T cd08289 159 VGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-QEESIKPL-EKQRWAGAVDPVGGKTLAYLLSTLQYG 236 (326)
T ss_pred HHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-HHHHHHhh-ccCCcCEEEECCcHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999888876543 23444444 345799999999988888999999999
Q ss_pred CEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
|+++.+|.........+...++.+++++.++.
T Consensus 237 G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 237 GSVAVSGLTGGGEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred CEEEEEeecCCCCCCcchhhhhhccceEEEEE
Confidence 99999997654333444666668888888874
No 49
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.4e-35 Score=260.12 Aligned_cols=264 Identities=28% Similarity=0.466 Sum_probs=221.0
Q ss_pred CEEEEEc--CCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC---------CCCCCCCCCCceeEE
Q 024011 1 MKAIVIT--QPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGASPYPGLECSGT 68 (274)
Q Consensus 1 m~a~~~~--~~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~---------~~~~p~~~G~e~~G~ 68 (274)
||+++++ .++++ ..+++++.+.|.++++||+||+.++++|++|++...+.... ....+.++|||++|+
T Consensus 13 ~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~ 92 (393)
T cd08246 13 MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGI 92 (393)
T ss_pred hhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEE
Confidence 7898885 34444 35889999999999999999999999999999887664110 011235889999999
Q ss_pred EEEecCCCCCCCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccC
Q 024011 69 ILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120 (274)
Q Consensus 69 V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l 120 (274)
|+++|++++.+++||+|+++. .+|+|++|++++...++++|+++++++++.+
T Consensus 93 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l 172 (393)
T cd08246 93 VWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAY 172 (393)
T ss_pred EEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhh
Confidence 999999999999999998874 2489999999999999999999999999999
Q ss_pred cchHHHHHHHHHhh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC----
Q 024011 121 PEVACTVWSTVFMT--SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---- 194 (274)
Q Consensus 121 ~~~~~~a~~~l~~~--~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---- 194 (274)
++++.+||+++... +++++|++++|+|+.|++|++++++++..|++++++++++++.+.++++|++.+++.+..
T Consensus 173 ~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~ 252 (393)
T cd08246 173 MLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWG 252 (393)
T ss_pred cccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEccccccccc
Confidence 99999999998654 678999999999999999999999999999999999999999999999999888875322
Q ss_pred ------------------cHHHHHHHHhCCC-CccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhc
Q 024011 195 ------------------DFVARVKEETGGK-GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 255 (274)
Q Consensus 195 ------------------~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 255 (274)
.+.+.+.+.+++. ++|++||+.|...+...+++++++|+++.+|........++...++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~ 332 (393)
T cd08246 253 VLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMR 332 (393)
T ss_pred ccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhh
Confidence 2456667777766 899999999987788899999999999999876543345666667777
Q ss_pred ceEEEEeec
Q 024011 256 RLTVQGIVP 264 (274)
Q Consensus 256 ~~~i~g~~~ 264 (274)
+.++.++..
T Consensus 333 ~~~i~g~~~ 341 (393)
T cd08246 333 QKRIQGSHF 341 (393)
T ss_pred eeEEEeccc
Confidence 888877643
No 50
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.1e-35 Score=252.88 Aligned_cols=260 Identities=21% Similarity=0.292 Sum_probs=211.2
Q ss_pred CEEEEEcCC-C---CCcceEEEee---cCC-CCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCC--ceeEEEE
Q 024011 1 MKAIVITQP-G---SPEVLQLQEV---EDP-QIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL--ECSGTIL 70 (274)
Q Consensus 1 m~a~~~~~~-~---~~~~~~~~~~---~~~-~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V~ 70 (274)
+|.+++..+ . .++.|++++. +.| ++++||||||+.++++|+.|.....+... ....|.++|+ |++|+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G~v~ 87 (348)
T PLN03154 9 NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFGVSK 87 (348)
T ss_pred ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeEEEE
Confidence 366777432 1 2356888774 555 35899999999999999998765433222 1134788998 8899999
Q ss_pred EecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCC--eE--ECCCCCCHH-hhccCcchHHHHHHHHHhhcCCCCCCEEEE
Q 024011 71 SVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQ--VL--PVPSGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLV 145 (274)
Q Consensus 71 ~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~--~~p~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI 145 (274)
.+|++++.|++||+|+++ ++|+||..++... ++ ++|++++++ ++++++++.+|+|+++.+..++++|+++||
T Consensus 88 ~vg~~v~~~~~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV 164 (348)
T PLN03154 88 VVDSDDPNFKPGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFV 164 (348)
T ss_pred EEecCCCCCCCCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence 999999999999999876 6799999998753 54 458999986 677899999999999988888999999999
Q ss_pred ecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCC-CcHHHHHHHHhCCCCccEEEECCChhhHHH
Q 024011 146 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQR 223 (274)
Q Consensus 146 ~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~ 223 (274)
+|++|++|++++|+|+..|++|+++++++++++.++ ++|++.+++++. .++.+.+.+.++ .++|++||++|+..+..
T Consensus 165 ~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvD~v~d~vG~~~~~~ 243 (348)
T PLN03154 165 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP-EGIDIYFDNVGGDMLDA 243 (348)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC-CCcEEEEECCCHHHHHH
Confidence 999999999999999999999999999999999887 799999998865 367777776665 57999999999888899
Q ss_pred hhhccccCCEEEEEecCCCCcc-----ccchhhHhhcceEEEEeecc
Q 024011 224 NLGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 224 ~~~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~g~~~~ 265 (274)
++++++++|+++.+|...+... .++...++.+++++.|++..
T Consensus 244 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~ 290 (348)
T PLN03154 244 ALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQS 290 (348)
T ss_pred HHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHH
Confidence 9999999999999997654321 13556678889999988743
No 51
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.2e-35 Score=252.95 Aligned_cols=240 Identities=35% Similarity=0.510 Sum_probs=218.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++.+++++.+..+++++.+.|.|+++||+||+.++|+|++|++...+.++.. .+|.++|||++|+|+.+|++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP-SLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC-CCCCccCcceEEEEEEeCCCCCCCC
Confidence 899999999888889999999999999999999999999999999887766532 3477899999999999999999999
Q ss_pred CCCEEEEEe-cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 81 VGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 81 ~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
+||+|+... ..|+|++|+.++.+.++++|+++++++++.++.+..++|+++.+...+++|++++|+|+.+.+|++++++
T Consensus 81 ~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~l 160 (327)
T PRK10754 81 VGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW 160 (327)
T ss_pred CCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence 999998653 3588999999999999999999999999988899999999987778899999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
++..|++++.+++++++.+.++++|.+.+++.+..++.+.+.+.+.++++|+++|+.|+......++.++++|+++.+|.
T Consensus 161 ak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~ 240 (327)
T PRK10754 161 AKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGN 240 (327)
T ss_pred HHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEcc
Confidence 99999999999999999999999999888888777888888888887889999999998778889999999999999987
Q ss_pred CC
Q 024011 240 QG 241 (274)
Q Consensus 240 ~~ 241 (274)
..
T Consensus 241 ~~ 242 (327)
T PRK10754 241 AS 242 (327)
T ss_pred CC
Confidence 65
No 52
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3.4e-35 Score=251.57 Aligned_cols=242 Identities=21% Similarity=0.311 Sum_probs=200.6
Q ss_pred CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEec
Q 024011 11 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90 (274)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 90 (274)
.++.+++++.+.|+|++|||+|||.++++|+.|.. |.++.. ..|.++|.|++|+|+++|+ .|++||+|+++
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-- 85 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS-- 85 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe--
Confidence 45679999999999999999999999999997653 332221 2367999999999999774 69999999986
Q ss_pred CCeeeeEEeeeCCCeEEC----CCCCCHHhh-ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 024011 91 GGGYAEKVAVPAGQVLPV----PSGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (274)
Q Consensus 91 ~g~~~~~~~~~~~~~~~~----p~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~ 165 (274)
++|++|+.++.+.+.++ |++++++++ +++++++.|+|+++.+..++++|+++||+|++|++|.+++|+++..|+
T Consensus 86 -~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~ 164 (325)
T TIGR02825 86 -PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC 164 (325)
T ss_pred -cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC
Confidence 46999999999888777 899999987 678999999999988888999999999999999999999999999999
Q ss_pred eEEEEecChhhHHHHHHcCCCEEEeCCCC-cHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCC-
Q 024011 166 RVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA- 243 (274)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~- 243 (274)
+|+++++++++.+.++++|++.+++++.. .+.+.+.... ++++|++||+.|+..+..++++++++|+++.+|.....
T Consensus 165 ~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~ 243 (325)
T TIGR02825 165 KVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYN 243 (325)
T ss_pred EEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcc
Confidence 99999999999999999999999987764 4544444444 45799999999988889999999999999999865421
Q ss_pred ---ccc--cchhhHhhcceEEEEee
Q 024011 244 ---KTE--LNITSLFAKRLTVQGIV 263 (274)
Q Consensus 244 ---~~~--~~~~~~~~~~~~i~g~~ 263 (274)
... .....+..+++++.++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~ 268 (325)
T TIGR02825 244 RTGPLPPGPPPEIVIYQELRMEGFI 268 (325)
T ss_pred cCCCCCCCcchHHHhhhcceEeEEE
Confidence 111 12334566778887765
No 53
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=5.1e-35 Score=255.84 Aligned_cols=257 Identities=29% Similarity=0.441 Sum_probs=219.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++++++ .+++++.+.|.| +++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 76 (386)
T cd08283 1 MKALVWHGKG---DVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVEEVGPEVRNL 76 (386)
T ss_pred CeeEEEecCC---CceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEEEeCCCCCCC
Confidence 9999998653 488999999988 5999999999999999999999887754 3457899999999999999999999
Q ss_pred CCCCEEEEEe-----------------------------------------------cCCeeeeEEeeeCC--CeEECCC
Q 024011 80 KVGDQVCALL-----------------------------------------------GGGGYAEKVAVPAG--QVLPVPS 110 (274)
Q Consensus 80 ~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~--~~~~~p~ 110 (274)
++||+|++.. .+|+|++|++++.+ .++++|+
T Consensus 77 ~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 77 KVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 9999998742 15889999999987 8999999
Q ss_pred CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEE
Q 024011 111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189 (274)
Q Consensus 111 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (274)
++++++++.++...+++|+++ +...+++|++++|+|+ |.+|.+++++++..|+ +++++++++++.+.+++++...++
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi 234 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI 234 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence 999999999999999999998 7788999999999975 9999999999999998 599999999999999988545666
Q ss_pred eCCCC-cHHHHHHHHhCCCCccEEEECCChh----------------------hHHHhhhccccCCEEEEEecCCCCccc
Q 024011 190 NYKTE-DFVARVKEETGGKGVDVILDCMGAS----------------------YFQRNLGSLNIDGRLFIIGTQGGAKTE 246 (274)
Q Consensus 190 ~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~----------------------~~~~~~~~l~~~g~~v~~g~~~~~~~~ 246 (274)
+.... ++.+.+.+.+.++++|++||+.|+. .+..++++++++|+++.+|........
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 314 (386)
T cd08283 235 NFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK 314 (386)
T ss_pred cCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence 66655 4777787777777899999999742 467788999999999999876543344
Q ss_pred cchhhHhhcceEEEEee
Q 024011 247 LNITSLFAKRLTVQGIV 263 (274)
Q Consensus 247 ~~~~~~~~~~~~i~g~~ 263 (274)
++...++.+++++.+..
T Consensus 315 ~~~~~~~~~~~~i~~~~ 331 (386)
T cd08283 315 FPIGAAMNKGLTLRMGQ 331 (386)
T ss_pred cCHHHHHhCCcEEEecc
Confidence 55555677788887764
No 54
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.4e-35 Score=252.41 Aligned_cols=257 Identities=23% Similarity=0.366 Sum_probs=217.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++++++ +++++.+.|.+.++||+||+.++++|++|++.+.+.++. ...|.++|||++|+|+++|++++.++
T Consensus 1 mka~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~~ 76 (351)
T cd08285 1 MKAFAMLGIGK---VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDFK 76 (351)
T ss_pred CceEEEccCCc---cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCccC
Confidence 99999998774 788899999899999999999999999999988776543 24578999999999999999999999
Q ss_pred CCCEEEEEe------------------------------cCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHHHH
Q 024011 81 VGDQVCALL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVW 128 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~ 128 (274)
+||+|++.. .+|+|++|+.++.. .++++|+++++++++.++.++.+++
T Consensus 77 ~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~ 156 (351)
T cd08285 77 PGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF 156 (351)
T ss_pred CCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHH
Confidence 999998742 25899999999974 8999999999999999999999999
Q ss_pred HHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCC
Q 024011 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 129 ~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (274)
+++ ....+++|+++||+|+ |++|++++|+++..|+ .++++++++++.+.++++|.+.+++.+..++.+++.+...++
T Consensus 157 ~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~ 234 (351)
T cd08285 157 HGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGK 234 (351)
T ss_pred HHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCC
Confidence 986 6678999999999975 9999999999999999 588888888899999999999999888778888888877777
Q ss_pred CccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCC-ccccchhh--HhhcceEEEEee
Q 024011 208 GVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITS--LFAKRLTVQGIV 263 (274)
Q Consensus 208 ~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~--~~~~~~~i~g~~ 263 (274)
++|+++|+.|+ ..+..+++.++++|+++.+|..... ...++... ...+..++.+.+
T Consensus 235 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 294 (351)
T cd08285 235 GVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGL 294 (351)
T ss_pred CCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEee
Confidence 89999999996 4578899999999999999876542 22333212 223455565543
No 55
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=3.6e-35 Score=252.44 Aligned_cols=253 Identities=26% Similarity=0.406 Sum_probs=215.6
Q ss_pred EEEEEcCC---CCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 2 KAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 2 ~a~~~~~~---~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||+++..+ ++++.++..+.|.|+|+++||+|||.++++|++|...+.+..+. ...|.++|+|++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGVVVAVGDEVTL 79 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEEEEEeCCCCCC
Confidence 67888887 77778999999999999999999999999999999988775442 235778999999999999999999
Q ss_pred CCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCC-----CCEEEEecCCc
Q 024011 79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGSS 150 (274)
Q Consensus 79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----g~~vlI~Ga~g 150 (274)
|++||+|+++. .+|+|++|+.++.+.++++|+++++++++.++.+.+++|+++....++++ |+++||+|+++
T Consensus 80 ~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g 159 (336)
T TIGR02817 80 FKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAG 159 (336)
T ss_pred CCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCc
Confidence 99999999874 25899999999999999999999999999999999999999877788877 99999999999
Q ss_pred hHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC-hhhHHHhhhcc
Q 024011 151 GIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSL 228 (274)
Q Consensus 151 ~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l 228 (274)
++|++++|+++.. |++|+++++++++.+.++++|++.+++.+. ++.+.+.+ ..++++|+++|+.+ .......++++
T Consensus 160 ~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~-~~~~~vd~vl~~~~~~~~~~~~~~~l 237 (336)
T TIGR02817 160 GVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEK-LGLEAVSYVFSLTHTDQHFKEIVELL 237 (336)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHh
Confidence 9999999999998 999999999999999999999999887554 56666665 44457999999875 46678899999
Q ss_pred ccCCEEEEEecCCCCccccchhhHhhcceEEEE
Q 024011 229 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQG 261 (274)
Q Consensus 229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 261 (274)
+++|+++.++.. ..++...+..+++++.+
T Consensus 238 ~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~ 266 (336)
T TIGR02817 238 APQGRFALIDDP----AELDISPFKRKSISLHW 266 (336)
T ss_pred ccCCEEEEEccc----ccccchhhhhcceEEEE
Confidence 999999987532 23444445555565554
No 56
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=6.3e-35 Score=254.07 Aligned_cols=257 Identities=28% Similarity=0.367 Sum_probs=215.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++...+++ +++++.|.|++.++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|+++..++
T Consensus 8 ~~a~~~~~~~~~--~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 8 CKAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV--TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred eEEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC--CCCCccccccceEEEEEeCCCCccCC
Confidence 788888876654 88999999999999999999999999999999988763 24578999999999999999999999
Q ss_pred CCCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCC
Q 024011 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (274)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (274)
+||+|+.+. ..|+|+||++++.+.++++|+++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 999998751 24789999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 024011 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (274)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (274)
++++++.+.+++.++|+++....++++|++++|+|+ |++|++++++++..|+ +|+++++++++++.++++|++.+++.
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 999999999999999998877888999999999975 9999999999999999 89999999999999999999888876
Q ss_pred CCCc--HHHHHHHHhCCCCccEEEECCCh-hhHHHhhhcc-ccCCEEEEEecCCCC-ccccchhhHhhcceEEEEeec
Q 024011 192 KTED--FVARVKEETGGKGVDVILDCMGA-SYFQRNLGSL-NIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 192 ~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l-~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~ 264 (274)
...+ +.+.+.+.++ +++|+++|++|. ..+..++..+ ..+|+++.+|..... ...++.. .+.++.++.+++.
T Consensus 243 ~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~ 318 (373)
T cd08299 243 QDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVF 318 (373)
T ss_pred cccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEe
Confidence 5433 5666666665 579999999996 4456656654 578999999976432 2333333 2345678887764
No 57
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=7.8e-35 Score=253.28 Aligned_cols=258 Identities=34% Similarity=0.548 Sum_probs=225.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC--
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR-- 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~-- 78 (274)
|||+++..++.+ +++++.+.|.+.++||+||+.++++|++|+....+.++. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~~ 76 (367)
T cd08263 1 MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENPY 76 (367)
T ss_pred CeeEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCCC
Confidence 999999988643 788899999999999999999999999999988876643 45778999999999999999988
Q ss_pred -CCCCCEEEEE-------------------------------------------------ecCCeeeeEEeeeCCCeEEC
Q 024011 79 -WKVGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPV 108 (274)
Q Consensus 79 -~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~ 108 (274)
|++||+|++. ..+|+|++|+.++...++++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 9999999872 13589999999999999999
Q ss_pred CCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCE
Q 024011 109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADV 187 (274)
Q Consensus 109 p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~ 187 (274)
|+++++.+++.++.+++++|+++.+...++++++++|+| +|++|++++++|+..|++ +++++.++++.+.+++++.+.
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~ 235 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATH 235 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCce
Confidence 999999999999999999999998878889999999996 599999999999999998 888888888888888999999
Q ss_pred EEeCCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCCCC-ccccchhhHhhcceEEEEee
Q 024011 188 CINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~ 263 (274)
+++.+..++.+.+.+..++.++|+++|+.++. ....++++++++|+++.++..... ...++...++.+++++.++.
T Consensus 236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (367)
T cd08263 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSY 313 (367)
T ss_pred EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecC
Confidence 99888778888888877777899999999987 788899999999999999865432 23456666667888887754
No 58
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.2e-34 Score=246.11 Aligned_cols=261 Identities=38% Similarity=0.575 Sum_probs=224.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++.++.+ +..+++++.+.|.+.++||+||+.++++|++|.+...+.+.. ...|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 78 (306)
T cd08258 1 MKALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGWK 78 (306)
T ss_pred CeeEEEecCC-CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcCC
Confidence 8999998743 345999999999999999999999999999999988876532 23467899999999999999999999
Q ss_pred CCCEEEEEec----------------------------CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCALLG----------------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~~~~----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|++... +|+|++|+.++.+.++++|+++++++++ +..+..++|+++.
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~ 157 (306)
T cd08258 79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVA 157 (306)
T ss_pred CCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHH
Confidence 9999988641 4899999999999999999999999887 7778889999988
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec--ChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG--SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
....++++++++|.| ++++|.+++++++..|++|+++.. ++++.+.++++|.+.+ +....++.+.+.+...++++|
T Consensus 158 ~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd 235 (306)
T cd08258 158 ERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGAD 235 (306)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCC
Confidence 888899999999977 599999999999999999887643 4456777888998877 777778888888877777899
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeeccc
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLI 266 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 266 (274)
+++|+.|. ......++.++++|+++.+|...+....+++..++.+++++.|++...
T Consensus 236 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 292 (306)
T cd08258 236 VVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST 292 (306)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc
Confidence 99999975 557788999999999999998764456778888889999999998754
No 59
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.5e-34 Score=247.95 Aligned_cols=258 Identities=32% Similarity=0.488 Sum_probs=221.5
Q ss_pred CEEEEEcCCCC--CcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGS--PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~--~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++.+++. ...+++++.+.|.+.++||+||+.++++|++|++...|.++....+|.++|||++|+|+.+|++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 99999999887 6779999999999999999999999999999999888876543456889999999999999999999
Q ss_pred CCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHH
Q 024011 79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ 158 (274)
Q Consensus 79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~ 158 (274)
+++||+|++.. .|+|++|+.++.+.++++|+. +.+++.++.++.++|+++.+...+++|++++|+|++|.+|.++++
T Consensus 82 ~~~Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~ 158 (329)
T cd08250 82 FKVGDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQ 158 (329)
T ss_pred CCCCCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHH
Confidence 99999999874 589999999999999999997 346677889999999999877889999999999999999999999
Q ss_pred HHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEe
Q 024011 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 159 ~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g 238 (274)
+++..|++++++++++++.+.++++|.+.+++.+..++.+.+.+..+ +++|+++|+.|+......+++++++|+++.+|
T Consensus 159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g 237 (329)
T cd08250 159 LAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KGVDVVYESVGGEMFDTCVDNLALKGRLIVIG 237 (329)
T ss_pred HHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CCCeEEEECCcHHHHHHHHHHhccCCeEEEEe
Confidence 99999999999999999999999999888888777666666666554 67999999999888889999999999999998
Q ss_pred cCCCCc----------cccchhhHhhcceEEEEee
Q 024011 239 TQGGAK----------TELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 239 ~~~~~~----------~~~~~~~~~~~~~~i~g~~ 263 (274)
...... ..++ ...+.++.++.++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 271 (329)
T cd08250 238 FISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFF 271 (329)
T ss_pred cccCCcccCccccccccccc-HHHhhcCceEEEEE
Confidence 765321 1122 23455677777764
No 60
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.4e-34 Score=249.72 Aligned_cols=257 Identities=25% Similarity=0.431 Sum_probs=222.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++++++. +++++.+.|+| .++||+||+.++++|++|+..+.|.++.. .+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~---~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~ 76 (345)
T cd08286 1 MKALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTNF 76 (345)
T ss_pred CceEEEecCCc---eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCcccc
Confidence 89999987664 89999999986 89999999999999999999998876542 347789999999999999999999
Q ss_pred CCCCEEEEEe----------------------------cCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHHHHH
Q 024011 80 KVGDQVCALL----------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWS 129 (274)
Q Consensus 80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~~ 129 (274)
++||+|+... .+|+|++|+.++.+ .++++|+++++.+++.+..+.+++|.
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 156 (345)
T cd08286 77 KVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE 156 (345)
T ss_pred CCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHH
Confidence 9999998742 13889999999987 89999999999999999999999998
Q ss_pred HHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCC
Q 024011 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 130 ~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
++....++++|++++|.|+ |++|.+++|+++..| .+++++++++++.+.++++|++.+++.+..++...+.+.+.+.+
T Consensus 157 ~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~ 235 (345)
T cd08286 157 CGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRG 235 (345)
T ss_pred HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCC
Confidence 7767788999999999886 999999999999999 79999888888888889999999888877777777887777778
Q ss_pred ccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 209 ~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+++|+.|. ..+..+++.++++|+++.+|.... ...+++..++.+++++.+..
T Consensus 236 ~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08286 236 VDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK-PVDLHLEKLWIKNITITTGL 290 (345)
T ss_pred CCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC-CCCcCHHHHhhcCcEEEeec
Confidence 9999999985 457788899999999999986543 34566666677888887643
No 61
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.3e-34 Score=247.61 Aligned_cols=258 Identities=26% Similarity=0.408 Sum_probs=217.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
||++++..+.+..+++++.|.|.++++||+||+.++++|++|++.+.|.++.....|.++|||++|+|+. .++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 6899999888778999999999999999999999999999999998887654334578899999999988 56678999
Q ss_pred CCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhh--cCCCCCC-EEEEecCCchH
Q 024011 82 GDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGE-SFLVHGGSSGI 152 (274)
Q Consensus 82 Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~g~-~vlI~Ga~g~i 152 (274)
||+|++.. .+|++++|+.+|.+.++++|+++++++++.++....+++.++... ..+.+|+ +++|+|++|.+
T Consensus 79 Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~v 158 (323)
T TIGR02823 79 GDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGV 158 (323)
T ss_pred CCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHH
Confidence 99999874 368999999999999999999999999999999999998876443 3378898 99999999999
Q ss_pred HHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCC
Q 024011 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232 (274)
Q Consensus 153 G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g 232 (274)
|.+++++|+..|++++++++++++.+.++++|.+.+++....+. .+.....+ ++|.++|+.|+..+...+++++++|
T Consensus 159 g~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G 235 (323)
T TIGR02823 159 GSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSP--PGKPLEKE-RWAGAVDTVGGHTLANVLAQLKYGG 235 (323)
T ss_pred HHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHH--HHHHhcCC-CceEEEECccHHHHHHHHHHhCCCC
Confidence 99999999999999999988888889999999888877544332 33334333 4999999999888888999999999
Q ss_pred EEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 233 RLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 233 ~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+++.+|.........+...++.+++++.++..
T Consensus 236 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 236 AVAACGLAGGPDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred EEEEEcccCCCCccccHHHHhhcceEEEEEec
Confidence 99999977544344455666678888888653
No 62
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=9.2e-35 Score=250.98 Aligned_cols=257 Identities=29% Similarity=0.466 Sum_probs=217.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++.+++. +++.+.+.|.| .++||+||+.++++|++|.+.+.|.++. ...|.++|+|++|+|+++|++++.+
T Consensus 1 ~ka~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~ 76 (347)
T cd05278 1 MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKRL 76 (347)
T ss_pred CceEEEecCCc---eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCcccc
Confidence 89999997654 88899999999 9999999999999999999998887754 3457899999999999999999999
Q ss_pred CCCCEEEEE------------------------------ecCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHHH
Q 024011 80 KVGDQVCAL------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTV 127 (274)
Q Consensus 80 ~~Gd~V~~~------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a 127 (274)
++||+|++. ..+|+|++|++++.+ .++++|+++++++++.++.++.++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta 156 (347)
T cd05278 77 KPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTG 156 (347)
T ss_pred CCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhe
Confidence 999999872 125899999999987 899999999999999999999999
Q ss_pred HHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 128 ~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
|+++ ...++++|++++|.|+ |++|.+++|+++..|+ +++++++++++.+.+++++++.+++.+..++.+.+.+.+++
T Consensus 157 ~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~ 234 (347)
T cd05278 157 FHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGG 234 (347)
T ss_pred eehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCC
Confidence 9998 6678999999999875 9999999999999997 88888888888888899999998888777787888877776
Q ss_pred CCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 207 ~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+++|+++|+.|. ..+...+++++++|+++.+|..............+.+++++.++.
T Consensus 235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
T cd05278 235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGL 292 (347)
T ss_pred CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeec
Confidence 789999999987 568889999999999999986543321111222335666666543
No 63
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.3e-34 Score=247.56 Aligned_cols=260 Identities=32% Similarity=0.456 Sum_probs=225.9
Q ss_pred EcCCCCCc--ceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCC
Q 024011 6 ITQPGSPE--VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD 83 (274)
Q Consensus 6 ~~~~~~~~--~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 83 (274)
++..+.+. .+++++.+.|.+.++||+||+.++++|+.|...+.+.++.....|.++|||++|+|+++|++++.+++||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 82 (323)
T cd05282 3 YTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQ 82 (323)
T ss_pred eCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCC
Confidence 45555554 6888899999999999999999999999999988776654334577899999999999999999999999
Q ss_pred EEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHc
Q 024011 84 QVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ 163 (274)
Q Consensus 84 ~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~ 163 (274)
+|+++..+|+|++|+.++.+.++++|+++++.+++.++....++|+++.....+++|++++|+|+++.+|++++++|+.+
T Consensus 83 ~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~ 162 (323)
T cd05282 83 RVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLL 162 (323)
T ss_pred EEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHC
Confidence 99998646899999999999999999999999999898999999999888888899999999999999999999999999
Q ss_pred CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCC
Q 024011 164 GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA 243 (274)
Q Consensus 164 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~ 243 (274)
|++++++++++++.+.++++|.+.+++....++...+.+.+.+.++|+++|+.|+......+++++++|+++.+|.....
T Consensus 163 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~ 242 (323)
T cd05282 163 GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE 242 (323)
T ss_pred CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC
Confidence 99999999999999999999999888887767778888887777899999999987778889999999999999876544
Q ss_pred ccccchhhHhhcceEEEEeecc
Q 024011 244 KTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 244 ~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
...++...+..++.++.++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd05282 243 PVPFPRSVFIFKDITVRGFWLR 264 (323)
T ss_pred CCCCCHHHHhhcCceEEEEEeh
Confidence 3455666655578888876643
No 64
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.8e-34 Score=248.98 Aligned_cols=259 Identities=32% Similarity=0.546 Sum_probs=224.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..++.+ +++++.+.|.+.++||+||+.++++|++|+....|..+. ...|.++|+|++|+|+.+|++++.|+
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~~ 77 (345)
T cd08260 1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRWR 77 (345)
T ss_pred CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccCC
Confidence 999999987765 888999999999999999999999999999998887553 34577899999999999999999999
Q ss_pred CCCEEEE---------------------------EecCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 81 VGDQVCA---------------------------LLGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
+||+|++ +..+|+|++|+.++.. .++++|+++++++++.++.+.+++|+++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 157 (345)
T cd08260 78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL 157 (345)
T ss_pred CCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHH
Confidence 9999986 3336899999999974 8999999999999999999999999998
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHhCCCCcc
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVD 210 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d 210 (274)
.+..++.++++++|+| .+++|++++++++..|++|++++++.++.+.++++|.+.+++.+. .++...+.+...+ ++|
T Consensus 158 ~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-~~d 235 (345)
T cd08260 158 VHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG-GAH 235 (345)
T ss_pred HHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC-CCC
Confidence 7778899999999999 599999999999999999999999999999999999999988876 6777777777766 799
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCc--cccchhhHhhcceEEEEeec
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~g~~~ 264 (274)
.+|++.|. ......+++++++|+++.+|...... ..+++..++.+++++.++..
T Consensus 236 ~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08260 236 VSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG 292 (345)
T ss_pred EEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc
Confidence 99999985 56788899999999999998765432 34556666677888887643
No 65
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.9e-34 Score=245.72 Aligned_cols=263 Identities=35% Similarity=0.579 Sum_probs=230.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++..+..+.+++++.+.|.++++|++||+.++++|++|++...|.++.....|.++|||++|+|+++|+++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 99999998765566888888888889999999999999999999998887654444678899999999999999999999
Q ss_pred CCCEEEEEe---------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCC
Q 024011 81 VGDQVCALL---------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP 139 (274)
Q Consensus 81 ~Gd~V~~~~---------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~ 139 (274)
+||+|++.. .+|+|++|+.++.+.++++|+++++.+++.+..+..++|+++.+...+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 160 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKP 160 (336)
T ss_pred CCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCC
Confidence 999999864 15889999999999999999999999999999999999999878788999
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHhCCCCccEEEECCCh
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
|++++|+| .+++|.+++++++..|++++++++++++.+.+++++.+.+++.+. .++.+.+.+..+++++|.++++.+.
T Consensus 161 g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 239 (336)
T cd08276 161 GDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGP 239 (336)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCCh
Confidence 99999996 589999999999999999999999999999998889888888766 6777788888777789999999998
Q ss_pred hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 219 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.....++++++++|+++.+|.........+...++.+++++.++..
T Consensus 240 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (336)
T cd08276 240 GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAV 285 (336)
T ss_pred HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEec
Confidence 7788899999999999999976654334556667788888888764
No 66
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.1e-34 Score=248.03 Aligned_cols=253 Identities=25% Similarity=0.340 Sum_probs=209.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++ .+++++.+.|+|+++||+||+.++++|++|++.+.|.++.. ..|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (339)
T PRK10083 1 MKSIVIEKPN---SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAAR 76 (339)
T ss_pred CeEEEEecCC---eeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccCC
Confidence 8999999765 49999999999999999999999999999999988876532 4588999999999999999999999
Q ss_pred CCCEEE---------------------------EEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVC---------------------------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~---------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|+ ++..+|+|++|+.++...++++|+++++++++ +..++.+++++. .
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~-~ 154 (339)
T PRK10083 77 IGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVT-G 154 (339)
T ss_pred CCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHH-H
Confidence 999998 34346899999999999999999999998876 556777888544 6
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKC-QGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
..++++|++++|+| .|++|++++|+++. +|++ ++++++++++.+.++++|++.+++.+..++.+.+.. .+.++|+
T Consensus 155 ~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~~~d~ 231 (339)
T PRK10083 155 RTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEE--KGIKPTL 231 (339)
T ss_pred hcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhc--CCCCCCE
Confidence 67899999999999 59999999999996 5995 777888899999999999999988776666655532 1234679
Q ss_pred EEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 212 ILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 212 vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+||+.|. ..+...+++++++|+++.+|.... ...++...+..+++++.+..
T Consensus 232 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 283 (339)
T PRK10083 232 IIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSR 283 (339)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEe
Confidence 9999995 468889999999999999987653 22334444455677776654
No 67
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.3e-34 Score=248.80 Aligned_cols=260 Identities=32% Similarity=0.457 Sum_probs=221.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC-----------CCCCCCCCCCceeEEE
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-----------PKGASPYPGLECSGTI 69 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~V 69 (274)
|||+++..++.+ +++++.|.|+++++||+||+.++++|++|++.+.+.++. ....|.++|||++|+|
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 78 (350)
T cd08240 1 MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV 78 (350)
T ss_pred CeeEEeccCCCC--ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence 899999887755 889999999999999999999999999999998875432 1234678999999999
Q ss_pred EEecCCCCCCCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcc
Q 024011 70 LSVGKNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (274)
Q Consensus 70 ~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (274)
+++|++++.+++||+|+++. ..|++++|+.++.+.++++|+++++.+++.+.+
T Consensus 79 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~ 158 (350)
T cd08240 79 VAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC 158 (350)
T ss_pred EeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence 99999999999999998762 358899999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHH
Q 024011 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (274)
Q Consensus 123 ~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (274)
.+.+||+++.+....+++++++|+| .|++|.+++++++..|+ +|+++++++++.+.++++|.+.+++.+..++.+.+.
T Consensus 159 ~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 237 (350)
T cd08240 159 SGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRII 237 (350)
T ss_pred hhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHH
Confidence 9999999997777677899999997 59999999999999999 788988899999999999998888877777777777
Q ss_pred HHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 202 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
+..++ ++|++||+.|. .....++++++++|+++.+|..... ...+...+..+++++.++...
T Consensus 238 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~ 300 (350)
T cd08240 238 KAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVG 300 (350)
T ss_pred HHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccC
Confidence 76665 79999999985 5688899999999999999876543 234444455677888776543
No 68
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=4.2e-34 Score=243.90 Aligned_cols=262 Identities=36% Similarity=0.605 Sum_probs=228.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++.++++..+++.+.+.|.+.+++|+|++.++++|++|+....|.++.....|.++|||++|+|+++|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 89999998876667889999999999999999999999999999988776554445678899999999999999999999
Q ss_pred CCCEEEEEe-----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Q 024011 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (274)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~ 155 (274)
+||+|+++. ..|++++|+.++.+.++++|+++++++++.++++..++|+++....++++|++++|+|+++++|.+
T Consensus 81 ~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~ 160 (325)
T cd08253 81 VGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHA 160 (325)
T ss_pred CCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHH
Confidence 999999885 368999999999999999999999999999999999999998887889999999999999999999
Q ss_pred HHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 156 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
++++++..|++|+++++++++.+.+++++.+.+++....++.+.+.+...++++|++++++|.......+++++++|+++
T Consensus 161 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v 240 (325)
T cd08253 161 AVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIV 240 (325)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEE
Confidence 99999999999999999999999998899988888777777777877776678999999999877788889999999999
Q ss_pred EEecCCCCccccchhhHhhcceEEEEee
Q 024011 236 IIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.++... ....++...++.++.++.+..
T Consensus 241 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd08253 241 VYGSGG-LRGTIPINPLMAKEASIRGVL 267 (325)
T ss_pred EEeecC-CcCCCChhHHHhcCceEEeee
Confidence 998754 223444444456666666554
No 69
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=3.9e-34 Score=248.52 Aligned_cols=257 Identities=28% Similarity=0.419 Sum_probs=222.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.++++ +++++.+.|+++++||+|++.++++|++|+..+.|.++. ..|.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (363)
T cd08279 1 MRAAVLHEVGKP--LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGVK 76 (363)
T ss_pred CeEEEEecCCCC--ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCccccC
Confidence 999999988754 889999999999999999999999999999998886652 3467899999999999999999999
Q ss_pred CCCEEEEE-----------------------------------------------ecCCeeeeEEeeeCCCeEECCCCCC
Q 024011 81 VGDQVCAL-----------------------------------------------LGGGGYAEKVAVPAGQVLPVPSGVS 113 (274)
Q Consensus 81 ~Gd~V~~~-----------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~ 113 (274)
+||+|++. ...|+|++|+.++.+.++++|++++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 99999883 1358999999999999999999999
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCC
Q 024011 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK 192 (274)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (274)
+++++.++++..++|.++....+++++++++|+|+ |++|++++++++..|++ |+++++++++.+.++++|.+.+++.+
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~ 235 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS 235 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence 99999999999999998878888999999999965 99999999999999996 99999999999888899998888887
Q ss_pred CCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEe
Q 024011 193 TEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGI 262 (274)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~ 262 (274)
..++..++.+...++++|+++|+.+. ......+++++++|+++.++.... ....++...+..++.++.++
T Consensus 236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (363)
T cd08279 236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGS 307 (363)
T ss_pred CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEE
Confidence 77788888877766779999999984 567889999999999999987552 33455666666566666665
No 70
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=3.2e-34 Score=251.85 Aligned_cols=263 Identities=28% Similarity=0.468 Sum_probs=219.5
Q ss_pred CEEEEEcC--CCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC---------CCCCC-CCCCCceeE
Q 024011 1 MKAIVITQ--PGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGAS-PYPGLECSG 67 (274)
Q Consensus 1 m~a~~~~~--~~~~-~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~---------~~~~p-~~~G~e~~G 67 (274)
|||+++.. ++++ ..+++.+.+.|.|+++||+||+.++++|.+|.+...+.... ....| .++|||++|
T Consensus 8 ~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G 87 (398)
T TIGR01751 8 MYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASG 87 (398)
T ss_pred hhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEE
Confidence 89999965 6655 56999999999999999999999999999998876553210 00113 379999999
Q ss_pred EEEEecCCCCCCCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhcc
Q 024011 68 TILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119 (274)
Q Consensus 68 ~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~ 119 (274)
+|+++|++++.+++||+|++.+ .+|+|++|+.++.+.++++|+++++++++.
T Consensus 88 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~ 167 (398)
T TIGR01751 88 VVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAAC 167 (398)
T ss_pred EEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhh
Confidence 9999999999999999998864 258999999999999999999999999999
Q ss_pred CcchHHHHHHHHHh--hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCC---
Q 024011 120 FPEVACTVWSTVFM--TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE--- 194 (274)
Q Consensus 120 l~~~~~~a~~~l~~--~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--- 194 (274)
+..+..++|+++.. ..++++|++++|+|++|++|++++++++..|++++++++++++.+.++++|++.++|.+..
T Consensus 168 ~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 247 (398)
T TIGR01751 168 PGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHW 247 (398)
T ss_pred ccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchh
Confidence 99999999998754 4678899999999999999999999999999999999989999999999999988876432
Q ss_pred -------------------cHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhc
Q 024011 195 -------------------DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 255 (274)
Q Consensus 195 -------------------~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 255 (274)
.+.+.+.+.+.++++|++|||.|...+...+++++++|+++.+|........++...++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 327 (398)
T TIGR01751 248 GRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMR 327 (398)
T ss_pred hccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhc
Confidence 2344566666667899999999987788899999999999999987654345566666666
Q ss_pred ceEEEEee
Q 024011 256 RLTVQGIV 263 (274)
Q Consensus 256 ~~~i~g~~ 263 (274)
+.++.++.
T Consensus 328 ~~~~~~~~ 335 (398)
T TIGR01751 328 QKRIQGSH 335 (398)
T ss_pred ccEEEccc
Confidence 77776654
No 71
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=6.9e-34 Score=244.45 Aligned_cols=264 Identities=41% Similarity=0.652 Sum_probs=226.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..++.+..+++++.+.|.+.+++|+||+.++++|.+|++.+.|..+....+|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 89999987766667888888888889999999999999999999998886543334577899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++.. .+|++++|+.++.+.++++|+++++++++.++.+..++++++.+
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~ 160 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT 160 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence 999998762 25789999999999999999999999999998899999999877
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
...++++++++|+|+++++|.+++++++..|++++++++++++.+.+...+.+..++....++.+.+.+...+.++|+++
T Consensus 161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 240 (342)
T cd08266 161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVV 240 (342)
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEE
Confidence 88899999999999999999999999999999999999999998888888887777776667777777776666799999
Q ss_pred ECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+++|...+...+++++++|+++.++.........+....+.+++++.+...
T Consensus 241 ~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
T cd08266 241 EHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTM 291 (342)
T ss_pred ECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEec
Confidence 999988888899999999999999876654334455455667777776653
No 72
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=6.8e-34 Score=245.90 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=214.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--------CCCCCCCCCCceeEEEEEe
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--------PKGASPYPGLECSGTILSV 72 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--------~~~~p~~~G~e~~G~V~~v 72 (274)
|||++++++++ +++++.+.|+++++||+||+.++++|++|++.+.|.... ....|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~---~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEEecCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 99999987654 899999999999999999999999999999988775311 1135678999999999999
Q ss_pred cCCCC--CCCCCCEEEE---------------------------Ee--cCCeeeeEEeeeCC-CeEECCCCCCHHhhccC
Q 024011 73 GKNVS--RWKVGDQVCA---------------------------LL--GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF 120 (274)
Q Consensus 73 G~~~~--~~~~Gd~V~~---------------------------~~--~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~l 120 (274)
|++++ .|++||+|++ +. .+|+|++|+.++.+ .++++|+++++++++.+
T Consensus 78 G~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~ 157 (350)
T cd08256 78 GEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI 157 (350)
T ss_pred CCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh
Confidence 99998 8999999987 21 35899999999987 57899999999999987
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
.++.++|+++ +..++++|++++|.| .|++|.+++++++..|++ ++++++++++.+.++++|++.+++....++.++
T Consensus 158 -~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 234 (350)
T cd08256 158 -EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEK 234 (350)
T ss_pred -hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHH
Confidence 8999999998 778899999999955 599999999999999985 667788888888889999998888877788888
Q ss_pred HHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhH-hhcceEEEEee
Q 024011 200 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQGIV 263 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 263 (274)
+.+.+++.++|+++|+.|. ..+...+++++++|+++.+|..... ..++...+ ..+++++.++.
T Consensus 235 ~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~ 299 (350)
T cd08256 235 IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP-VTVDWSIIGDRKELDVLGSH 299 (350)
T ss_pred HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC-CccChhHhhcccccEEEEec
Confidence 8888877789999999995 4578889999999999999865432 23444333 24566776654
No 73
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6e-34 Score=247.44 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=218.4
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
||+++.+.+.+ +++++.+.|.+.++||+||+.++++|++|++.+.+.++. ..|.++|||++|+|+++|++++.+++
T Consensus 2 ~a~~~~~~~~~--~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 2 KAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred ceeEEecCCCC--cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCCC
Confidence 68888876654 889999999999999999999999999999998886542 35679999999999999999999999
Q ss_pred CCEEEEEe------------------------------------------------cCCeeeeEEeeeCCCeEECCCCCC
Q 024011 82 GDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGVS 113 (274)
Q Consensus 82 Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~ 113 (274)
||+|++.. ..|+|++|+.++.+.++++|++++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~ 157 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP 157 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence 99998752 136899999999999999999999
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCC
Q 024011 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK 192 (274)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (274)
+++++.+.+++.++|+++.+..++++|++++|+|+ |++|++++++++..|++ ++++++++++.+.++++|.+.+++..
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 236 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR 236 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence 99999999999999998878888999999999975 99999999999999996 77777899999999999998888776
Q ss_pred CC--cHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccc-cCCEEEEEecCC-CCccccchhhHhhcceEEEEeec
Q 024011 193 TE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLN-IDGRLFIIGTQG-GAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~-~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.. ++.+.+.+.++ +++|+++|++|. ..+..++++++ ++|+++.+|... .....++...+ .++.++.|++.
T Consensus 237 ~~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~ 311 (365)
T cd05279 237 DQDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVF 311 (365)
T ss_pred cccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEec
Confidence 65 66677777765 679999999985 56788899999 999999998753 23445666656 66777877643
No 74
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7e-34 Score=241.15 Aligned_cols=249 Identities=29% Similarity=0.441 Sum_probs=211.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++.+ +..+++++.+.|.++++||+||+.++++|+.|.+...+. ..+.++|||++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~~~G~~v~~~~ 74 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVERAAADGSGPA 74 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEEEeCCCCCCCC
Confidence 8999998865 667889999999999999999999999999999876521 2356899999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++..+|+|++|+.++.+.++++|+++++++++.+++...++|+++...... +|++++|+|+++++|.++++++
T Consensus 75 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a 153 (305)
T cd08270 75 VGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLA 153 (305)
T ss_pred CCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHH
Confidence 999999986679999999999999999999999999999999999999998666554 5999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++++.+++++++.+.++++|.+..++... +..+ +++|+++|+.|.......+++++.+|+++.+|..
T Consensus 154 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~ 224 (305)
T cd08270 154 ALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS--------ELSG-APVDLVVDSVGGPQLARALELLAPGGTVVSVGSS 224 (305)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc--------cccC-CCceEEEECCCcHHHHHHHHHhcCCCEEEEEecc
Confidence 999999999999999999999999876543221 1112 4699999999988888999999999999999876
Q ss_pred CCCccccchhhHhh--cceEEEEeecc
Q 024011 241 GGAKTELNITSLFA--KRLTVQGIVPL 265 (274)
Q Consensus 241 ~~~~~~~~~~~~~~--~~~~i~g~~~~ 265 (274)
......++...+.. ++.++.++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 225 SGEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred CCCcccccHHHHhcccccceEEEEEcc
Confidence 53334455555544 57777776543
No 75
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.1e-33 Score=244.00 Aligned_cols=256 Identities=32% Similarity=0.486 Sum_probs=219.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++++++. +++++.+.|++.+++|+||+.++++|+.|+..+.+.++ ....|.++|+|++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~~ 76 (343)
T cd08235 1 MKAAVLHGPND---VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGFK 76 (343)
T ss_pred CeEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCCC
Confidence 89999998763 88899999989999999999999999999999887664 223467899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCC-----eEECCCCCCHHhhccCcchHHHHH
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQ-----VLPVPSGVSLKDAAAFPEVACTVW 128 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~l~~~~~~a~ 128 (274)
+||+|+++. .+|+|++|+.++... ++++|+++++.+++.+ ++..+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~ 155 (343)
T cd08235 77 VGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCI 155 (343)
T ss_pred CCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHH
Confidence 999999862 358999999999988 9999999999999765 7888999
Q ss_pred HHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCC
Q 024011 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 129 ~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (274)
+++.. .++++|++++|+| .|++|++++++++..|++ ++++++++++.+.+++++.+.+++.+..++.+.+.+...++
T Consensus 156 ~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 233 (343)
T cd08235 156 NAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGR 233 (343)
T ss_pred HHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCc
Confidence 99854 4899999999997 589999999999999999 88888899988888889998888888888888888877777
Q ss_pred CccEEEECCChh-hHHHhhhccccCCEEEEEecCCCC-ccccchhhHhhcceEEEEee
Q 024011 208 GVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 208 ~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~ 263 (274)
++|+++|+.+.. .....+++++++|+++.++..... ...++......+++++.++.
T Consensus 234 ~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 291 (343)
T cd08235 234 GADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSY 291 (343)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEe
Confidence 899999999964 678889999999999999865432 23444555667777777654
No 76
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=6.1e-34 Score=245.05 Aligned_cols=254 Identities=27% Similarity=0.438 Sum_probs=214.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++++++. ..+++.|.|.+.++||+||+.++++|++|++.+.|.++. ..|.++|||++|+|+++|++++.|+
T Consensus 1 mka~~~~~~~~~--~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (338)
T PRK09422 1 MKAAVVNKDHTG--DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVKEVGPGVTSLK 76 (338)
T ss_pred CeEEEecCCCCC--ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEEEECCCCccCC
Confidence 999999987764 227899999999999999999999999999988886543 2367899999999999999999999
Q ss_pred CCCEEEE-----------Ee-----------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA-----------LL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~-----------~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|++ ++ .+|+|++|+.++.+.++++|+++++++++.++.+.+++|+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~- 155 (338)
T PRK09422 77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI- 155 (338)
T ss_pred CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-
Confidence 9999986 21 258999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHHHHhCCCCcc
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVD 210 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d 210 (274)
...++++|++++|+| .|++|.+++++++. .|++|+++++++++.+.++++|.+.+++.+. .++.+.+.+..+ ++|
T Consensus 156 ~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--~~d 232 (338)
T PRK09422 156 KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG--GAH 232 (338)
T ss_pred HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcC--CCc
Confidence 677899999999999 59999999999998 5999999999999999999999988888754 556666766655 588
Q ss_pred -EEEECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 211 -VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 211 -~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+++++.+...+..++++++.+|+++.+|.... ...++...+..++.++.+++
T Consensus 233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 285 (338)
T PRK09422 233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSL 285 (338)
T ss_pred EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEec
Confidence 45555555668899999999999999987543 23456666666777877755
No 77
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.2e-33 Score=241.29 Aligned_cols=264 Identities=62% Similarity=0.993 Sum_probs=230.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++.++.++.+..+++++.+.+.+++++++||+.++++|++|.....+.++.+...|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 89999998777777888887777789999999999999999999988776654334578899999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++..+|+|++|+.++.+.++++|+++++.+++.+..+..++++++.+...++++++++|+|+++++|.++++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a 160 (325)
T TIGR02824 81 VGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLA 160 (325)
T ss_pred CCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHH
Confidence 99999998766899999999999999999999999999999999999998878889999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++++++.+++++.+.+++++.+.+++....++.+.+.+...++++|++++++|.......+++++++|+++.++..
T Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
T TIGR02824 161 KAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ 240 (325)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecC
Confidence 99999999999999988888888888877776666777777777666799999999987788899999999999999875
Q ss_pred CCCccccchhhHhhcceEEEEeec
Q 024011 241 GGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
......++...++.+++++.++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~ 264 (325)
T TIGR02824 241 GGRKAELDLGPLLAKRLTITGSTL 264 (325)
T ss_pred CCCcCCCChHHHHhcCCEEEEEeh
Confidence 533235566666688888888764
No 78
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.3e-33 Score=242.98 Aligned_cols=253 Identities=34% Similarity=0.527 Sum_probs=216.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.++ .+++.+.+.|.+.++||+|||.++++|+.|.....+.++.. ..|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (337)
T cd08261 1 MKALVCEKPG---RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGLK 76 (337)
T ss_pred CeEEEEeCCC---ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCCC
Confidence 8999998764 48899999999999999999999999999999988765433 3467899999999999999999999
Q ss_pred CCCEEEE---------------------------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++ +...|+|++|+.++.+ ++++|+++++++++.+ .+..++++++ .
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~ 153 (337)
T cd08261 77 VGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-R 153 (337)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-H
Confidence 9999987 2236899999999999 9999999999999866 6778888887 7
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
..++++|+++||+|+ +.+|.+++++|+..|++|+++++++++.+.+++++.+++++....++.+.+.+..++.++|+++
T Consensus 154 ~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vl 232 (337)
T cd08261 154 RAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVI 232 (337)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEE
Confidence 788999999999974 8999999999999999999999999999999999999999888777888888887777899999
Q ss_pred ECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEe
Q 024011 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262 (274)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 262 (274)
|+.|+ .....+++.++++|+++.++.... ...++...+..+++++.+.
T Consensus 233 d~~g~~~~~~~~~~~l~~~G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~ 281 (337)
T cd08261 233 DATGNPASMEEAVELVAHGGRVVLVGLSKG-PVTFPDPEFHKKELTILGS 281 (337)
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEcCCCC-CCccCHHHHHhCCCEEEEe
Confidence 99976 457888999999999999986542 2344555566667776654
No 79
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.3e-33 Score=243.52 Aligned_cols=254 Identities=29% Similarity=0.444 Sum_probs=215.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++..++ .+++++.+.|+|. ++||+||+.++++|+.|++...|.++. ..|.++|+|++|+|+++|++++.+
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (344)
T cd08284 1 MKAVVFKGPG---DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRTL 75 (344)
T ss_pred CeeEEEecCC---CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCcccc
Confidence 8999998764 4899999999985 999999999999999999988876652 346789999999999999999999
Q ss_pred CCCCEEEEEe-------------------------------cCCeeeeEEeeeCC--CeEECCCCCCHHhhccCcchHHH
Q 024011 80 KVGDQVCALL-------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 80 ~~Gd~V~~~~-------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
++||+|++.. .+|+|++|+.++.+ .++++|+++++++++.+++++++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~t 155 (344)
T cd08284 76 KVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPT 155 (344)
T ss_pred CCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHH
Confidence 9999998753 14889999999965 99999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhC
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
+|+++.. ..+++|++++|+| .|++|++++++++..|+ +++++++++++.+.++++|+. .++.+..++...+.+.+.
T Consensus 156 a~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~ 232 (344)
T cd08284 156 GYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVREATE 232 (344)
T ss_pred HHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhC
Confidence 9999854 7888999999997 59999999999999997 899998888888888888875 456666677788888777
Q ss_pred CCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEe
Q 024011 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGI 262 (274)
Q Consensus 206 ~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 262 (274)
++++|++||+.|. ......+++++++|+++.+|..............+.+++++.+.
T Consensus 233 ~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (344)
T cd08284 233 GRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFG 290 (344)
T ss_pred CCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEe
Confidence 7789999999986 46788899999999999999776443344555566777777644
No 80
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.3e-33 Score=242.72 Aligned_cols=260 Identities=33% Similarity=0.501 Sum_probs=224.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||++++..++++. +++++.+.|.++++||+|++.++++|+.|.....+.++.....|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 9999999988865 788888999999999999999999999999998887764445577899999999999999999999
Q ss_pred CCCEEEE------------------Ee---------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCA------------------LL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~------------------~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++ ++ .+|+|++|+.++.+.++++|+++++++++.+..++.++|+++..
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~ 159 (338)
T cd08254 80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR 159 (338)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence 9999986 21 25899999999999999999999999999999999999999888
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
...+++++++||.| +|++|++++++++..|++|+++++++++.+.++++|.+.+++.......+.+ ....++++|+++
T Consensus 160 ~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~D~vi 237 (338)
T cd08254 160 AGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKK-AAGLGGGFDVIF 237 (338)
T ss_pred ccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCCceEEE
Confidence 88899999999986 4899999999999999999999999999999999998888877666666656 556667899999
Q ss_pred ECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
|+.|. ......+++++++|+++.++.... ...++...++.++.++.+++.
T Consensus 238 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 288 (338)
T cd08254 238 DFVGTQPTFEDAQKAVKPGGRIVVVGLGRD-KLTVDLSDLIARELRIIGSFG 288 (338)
T ss_pred ECCCCHHHHHHHHHHhhcCCEEEEECCCCC-CCccCHHHHhhCccEEEEecc
Confidence 99985 467889999999999999986543 234566667777888877553
No 81
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.9e-33 Score=241.11 Aligned_cols=254 Identities=36% Similarity=0.519 Sum_probs=213.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++..+++ .+.+++.|.|.+.++||+|++.++++|++|++...|.++. ...|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~ 77 (332)
T cd08259 1 MKAAILHKPNK--PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVEEVGEGVERFK 77 (332)
T ss_pred CeEEEEecCCC--ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEEEECCCCccCC
Confidence 89999987433 4888999999999999999999999999999998886654 23577899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|+++. ..|+|++|++++...++++|+++++++++.++.++.++|+++..
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~ 157 (332)
T cd08259 78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR 157 (332)
T ss_pred CCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence 999999874 15899999999999999999999999999999999999999866
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
..++++++++|+|++|++|++++++++..|++++++++++++.+.+++++.+.+++.+. +.+.+.+.. ++|+++
T Consensus 158 -~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~d~v~ 231 (332)
T cd08259 158 -AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLG---GADVVI 231 (332)
T ss_pred -hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhcc---CCCEEE
Confidence 78899999999999999999999999999999999999988888888888877765443 444554432 599999
Q ss_pred ECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+++|.......++.++++|+++.++........++......++.++.++.
T Consensus 232 ~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (332)
T cd08259 232 ELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSI 281 (332)
T ss_pred ECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEec
Confidence 99998888889999999999999987643322233333445666666653
No 82
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.2e-33 Score=239.34 Aligned_cols=235 Identities=34% Similarity=0.572 Sum_probs=207.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++..+.+..+++++.+.|.+.++||+||+.++++|++|++...+.++. ...|.++|||++|+|+++|. ..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~~ 77 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTFT 77 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCCC
Confidence 89999998876667888888888889999999999999999999988876542 23467899999999999995 5799
Q ss_pred CCCEEEEEec------CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Q 024011 81 VGDQVCALLG------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGT 154 (274)
Q Consensus 81 ~Gd~V~~~~~------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~ 154 (274)
+||+|+++.. +|+|++|+.++...++++|+++++++++.+++++.++|+++.+...+++|++++|+|++|++|+
T Consensus 78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~ 157 (320)
T cd08243 78 PGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGL 157 (320)
T ss_pred CCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHH
Confidence 9999998752 4899999999999999999999999999999999999999988888999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEE
Q 024011 155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234 (274)
Q Consensus 155 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~ 234 (274)
+++++++..|++|+++++++++.+.++++|.+.+++. ..++.+.+.+. ++++|+++|+.|+..+...+++++++|++
T Consensus 158 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~--~~~~d~vl~~~~~~~~~~~~~~l~~~g~~ 234 (320)
T cd08243 158 AALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAA--PGGFDKVLELVGTATLKDSLRHLRPGGIV 234 (320)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHh--CCCceEEEECCChHHHHHHHHHhccCCEE
Confidence 9999999999999999999999999999998887754 44666667666 56799999999988888999999999999
Q ss_pred EEEecCC
Q 024011 235 FIIGTQG 241 (274)
Q Consensus 235 v~~g~~~ 241 (274)
+.+|...
T Consensus 235 v~~g~~~ 241 (320)
T cd08243 235 CMTGLLG 241 (320)
T ss_pred EEEccCC
Confidence 9998753
No 83
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=3.5e-34 Score=246.67 Aligned_cols=237 Identities=33% Similarity=0.509 Sum_probs=209.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||++++.++ +..+++++.+.|+|+++||+||+.++++|++|+....+.. ....|.++|||++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVVEVGSGVTRFK 77 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEEEeCCCcCcCC
Confidence 9999999886 6669999999999999999999999999999998775554 112467899999999999999999999
Q ss_pred CCCEEEEEec--------CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCC----------CCCCE
Q 024011 81 VGDQVCALLG--------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL----------SPGES 142 (274)
Q Consensus 81 ~Gd~V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~----------~~g~~ 142 (274)
+||+|+++.. +|+|++|+.++.+.++++|+++++++++.++.++.++|+++.+..++ +++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (339)
T cd08249 78 VGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKP 157 (339)
T ss_pred CCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCE
Confidence 9999999864 48999999999999999999999999999999999999998665544 78999
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhH
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYF 221 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~ 221 (274)
++|+|+++.+|++++++++..|++++.++ ++++.+.++++|.+.+++....++.+.+.+..+ +++|+++|+.|. ..+
T Consensus 158 vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~~~d~vl~~~g~~~~~ 235 (339)
T cd08249 158 VLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-GKLRYALDCISTPESA 235 (339)
T ss_pred EEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcC-CCeeEEEEeeccchHH
Confidence 99999999999999999999999999888 568888889999999888887788888876665 679999999997 678
Q ss_pred HHhhhcccc--CCEEEEEecCCC
Q 024011 222 QRNLGSLNI--DGRLFIIGTQGG 242 (274)
Q Consensus 222 ~~~~~~l~~--~g~~v~~g~~~~ 242 (274)
..+++++++ +|+++.++....
T Consensus 236 ~~~~~~l~~~~~g~~v~~g~~~~ 258 (339)
T cd08249 236 QLCAEALGRSGGGKLVSLLPVPE 258 (339)
T ss_pred HHHHHHHhccCCCEEEEecCCCc
Confidence 899999999 999999986543
No 84
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.5e-33 Score=240.95 Aligned_cols=257 Identities=31% Similarity=0.413 Sum_probs=219.8
Q ss_pred CEEEEEcCCCCCc---ceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 024011 1 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (274)
Q Consensus 1 m~a~~~~~~~~~~---~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (274)
|||+++++++++. .+++++.+.|++.++||+||+.++++|++|++.+.+..+. ...|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~ 79 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT 79 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence 8999999988765 4788888998999999999999999999999988776542 23466899999999999999999
Q ss_pred CCCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCC-----CCEEEEecCC
Q 024011 78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGS 149 (274)
Q Consensus 78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----g~~vlI~Ga~ 149 (274)
.|++||+|+... .+|+|++|+.++.+.++++|+++++++++.++....++|+++.+...+++ |++++|+|+.
T Consensus 80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~ 159 (336)
T cd08252 80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGA 159 (336)
T ss_pred CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCC
Confidence 999999999864 46899999999999999999999999999999999999999877778877 9999999988
Q ss_pred chHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhc
Q 024011 150 SGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGS 227 (274)
Q Consensus 150 g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~ 227 (274)
|++|++++++++..| ++|+++++++++.+.++++|.+.+++... ++.+.+.. ..++++|+++|+.|. .....++++
T Consensus 160 g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~-~~~~~~d~vl~~~~~~~~~~~~~~~ 237 (336)
T cd08252 160 GGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEA-LGIEPVDYIFCLTDTDQHWDAMAEL 237 (336)
T ss_pred chHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHh-hCCCCCCEEEEccCcHHHHHHHHHH
Confidence 999999999999999 99999999999999999999988887664 55566653 344579999999985 568889999
Q ss_pred cccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++++|+++.+|... ..++...++.+++++.+..
T Consensus 238 l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~ 270 (336)
T cd08252 238 IAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEF 270 (336)
T ss_pred hcCCCEEEEecCCC---CcccchhhhcccceEEEEE
Confidence 99999999998652 2445555556777777654
No 85
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.7e-33 Score=240.69 Aligned_cols=255 Identities=34% Similarity=0.505 Sum_probs=216.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++.+ .+++++.+.|+++++||+||+.++++|+.|+....+.++. ..|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~a~~~~~~~---~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~--~~~~~~g~~~~G~V~~~g~~v~~~~ 75 (343)
T cd08236 1 MKALVLTGPG---DLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY--HPPLVLGHEFSGTVEEVGSGVDDLA 75 (343)
T ss_pred CeeEEEecCC---ceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC--CCCcccCcceEEEEEEECCCCCcCC
Confidence 8999999875 3889999999999999999999999999999988776522 3467899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|+++. .+|+|++|+.+|.+.++++|+++++++++.+ ++..++|+++.
T Consensus 76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~- 153 (343)
T cd08236 76 VGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR- 153 (343)
T ss_pred CCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-
Confidence 999999862 3589999999999999999999999999877 67889999985
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
...++++++++|+|+ +.+|.+++++++..|++ ++++++++++.+.+++++.+.+++.+... .+++.+..+++++|++
T Consensus 154 ~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~d~v 231 (343)
T cd08236 154 LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGADLV 231 (343)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHHhCCCCCCEE
Confidence 678899999999974 89999999999999997 99999898888888889988888877666 7777777777789999
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCCCc--cccchhhHhhcceEEEEeec
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~g~~~ 264 (274)
+|+.|. .....++++++++|+++.+|...... ...++..++.++.++.++..
T Consensus 232 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (343)
T cd08236 232 IEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWN 286 (343)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEee
Confidence 999975 45788899999999999998664321 12234445677888887764
No 86
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-33 Score=241.56 Aligned_cols=253 Identities=33% Similarity=0.498 Sum_probs=213.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++++ +++++.|.|++.++|++||+.++++|++|++...|.++. ..+|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (334)
T PRK13771 1 MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVEEVGENVKGFK 77 (334)
T ss_pred CeeEEEcCCCCC--cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEEEeCCCCccCC
Confidence 899999988764 889999999999999999999999999999988876543 23467899999999999999998899
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++.. .+|+|++|+.++.+.++++|+++++.+++.+.++..++|+++..
T Consensus 78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~ 157 (334)
T PRK13771 78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRR 157 (334)
T ss_pred CCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHh
Confidence 999999863 15899999999999999999999999999999999999999866
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
. .++++++++|+|++|.+|++++++++..|++++++++++++.+.++++ ++.+++.+ ++.+.+.+. + ++|+++
T Consensus 158 ~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~-~--~~d~~l 230 (334)
T PRK13771 158 A-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKI-G--GADIVI 230 (334)
T ss_pred c-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhc-C--CCcEEE
Confidence 5 889999999999999999999999999999999999999998888877 65555544 444555543 2 599999
Q ss_pred ECCChhhHHHhhhccccCCEEEEEecCCCCcc-ccchhhHhhcceEEEEee
Q 024011 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~ 263 (274)
|+.|+......++.++++|+++.+|....... ......++.+++++.+..
T Consensus 231 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (334)
T PRK13771 231 ETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHI 281 (334)
T ss_pred EcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEec
Confidence 99998878899999999999999997643221 233444456778887764
No 87
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.9e-33 Score=237.12 Aligned_cols=257 Identities=34% Similarity=0.574 Sum_probs=221.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++.++.+++++.+.|.+.+++|+|++.++++|++|.....+........|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 89999999887777888888888889999999999999999999988776543333467899999999999999999999
Q ss_pred CCCEEEEEe-----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Q 024011 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (274)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~ 155 (274)
+||+|+++. ..|+|++|+.++...++++|+++++.+++.++....++|+++.+..++++|++++|+|+.+++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~ 160 (326)
T cd08272 81 VGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHV 160 (326)
T ss_pred CCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHH
Confidence 999999885 268899999999999999999999999998999999999998788899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 156 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
++++++..|+++++++++ ++.+.+++++.+.+++.... +.+.+.+.+.+.++|.++|+.|+......++++.++|+++
T Consensus 161 ~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v 238 (326)
T cd08272 161 AVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVV 238 (326)
T ss_pred HHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEE
Confidence 999999999999999988 88888888998888877666 7777877777778999999999877888899999999999
Q ss_pred EEecCCCCccccchhhHhhcceEEEEee
Q 024011 236 IIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.++... ..++.....+++++.+..
T Consensus 239 ~~~~~~----~~~~~~~~~~~~~~~~~~ 262 (326)
T cd08272 239 SILGGA----THDLAPLSFRNATYSGVF 262 (326)
T ss_pred EEecCC----ccchhhHhhhcceEEEEE
Confidence 998653 122222335666666655
No 88
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.7e-33 Score=239.77 Aligned_cols=251 Identities=33% Similarity=0.558 Sum_probs=210.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++.++ .+.+++++.+.|+++++||+||+.++++|++|+....+ ... ...|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~-~~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKV-KPMPHIPGAEFAGVVEEVGDHVKGVK 77 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCC-CCCCeecccceeEEEEEECCCCCCCC
Confidence 8999998776 55688888888889999999999999999999988764 221 12466899999999999999999999
Q ss_pred CCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|+++. .+|+|++|+.++.+.++++|+++++++++.++.+..++|+++..
T Consensus 78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~ 157 (325)
T cd08264 78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT 157 (325)
T ss_pred CCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence 999998651 35899999999999999999999999999999999999999855
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
.++++|++++|+|++|.+|++++++|+..|+++++++++ +.++++|.+.+++.+. ..+.+.+.+ +++|+++
T Consensus 158 -~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~~----~~~~~~g~~~~~~~~~--~~~~l~~~~--~~~d~vl 228 (325)
T cd08264 158 -AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSRK----DWLKEFGADEVVDYDE--VEEKVKEIT--KMADVVI 228 (325)
T ss_pred -cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeHH----HHHHHhCCCeeecchH--HHHHHHHHh--CCCCEEE
Confidence 889999999999999999999999999999999888743 5667788888776543 244555555 5699999
Q ss_pred ECCChhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++.|...+..++++++++|+++.+|........+++..+..++.++.++.
T Consensus 229 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (325)
T cd08264 229 NSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGST 278 (325)
T ss_pred ECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEcc
Confidence 99998778899999999999999987533334666677777778887764
No 89
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.1e-33 Score=236.06 Aligned_cols=263 Identities=37% Similarity=0.548 Sum_probs=226.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
||+++++..+.++.+++++.+.|.+++++++|++.++++|+.|.....+.+.....+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 89999998777777888888888889999999999999999999887776544334477899999999999999999999
Q ss_pred CCCEEEEEe-----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Q 024011 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (274)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~ 155 (274)
+||+|+++. .+|.+++|+.++.+.++++|+++++++++.+..+..++|.++.....+.++++++|+|+++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~ 160 (328)
T cd08268 81 VGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLA 160 (328)
T ss_pred CCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHH
Confidence 999999874 248899999999999999999999999999999999999998778888999999999999999999
Q ss_pred HHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 156 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
++++++..|++++++++++++.+.+++++.+.+++.+..++.+.+.+...+.++|+++++.|+......+++++++|+++
T Consensus 161 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v 240 (328)
T cd08268 161 AIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLV 240 (328)
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEE
Confidence 99999999999999999999888888888888887777677777777776667999999999877888899999999999
Q ss_pred EEecCCCCccccchhhHhhcceEEEEee
Q 024011 236 IIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.+|........++....+.+++++.+..
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (328)
T cd08268 241 VYGALSGEPTPFPLKAALKKSLTFRGYS 268 (328)
T ss_pred EEEeCCCCCCCCchHHHhhcCCEEEEEe
Confidence 9986543323344443567777777654
No 90
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=3.7e-33 Score=240.13 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=215.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
|+++.+.+++ .+++++.+.|+|+++||+||+.++++|++|.+.+.|.+.. ..+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~ 77 (337)
T cd05283 1 KGYAARDASG--KLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFKV 77 (337)
T ss_pred CceEEecCCC--CceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccCC
Confidence 5778887764 5999999999999999999999999999999998887643 345889999999999999999999999
Q ss_pred CCEEEEE-----------------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHH
Q 024011 82 GDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (274)
Q Consensus 82 Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (274)
||+|+.. ..+|+|++|+.++.+.++++|+++++++++.+.+...+
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 157 (337)
T cd05283 78 GDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT 157 (337)
T ss_pred CCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHH
Confidence 9999731 23589999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 127 a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
+|+++... .+++|++++|.| .|++|++++++++..|++++++++++++.+.+++++++.+++....++... . .
T Consensus 158 a~~~~~~~-~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~----~-~ 230 (337)
T cd05283 158 VYSPLKRN-GVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKK----A-A 230 (337)
T ss_pred HHHHHHhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhh----c-c
Confidence 99988554 589999999987 599999999999999999999999999999999999988887655433221 1 3
Q ss_pred CCccEEEECCChhh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 207 KGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.++|++||+.|... ....+++++++|+++.+|..... ..+++..++.+++++.++...
T Consensus 231 ~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~ 289 (337)
T cd05283 231 GSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP-LPVPPFPLIFGRKSVAGSLIG 289 (337)
T ss_pred CCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC-CccCHHHHhcCceEEEEeccc
Confidence 56999999999864 78889999999999999976543 256666677789999987654
No 91
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=6e-33 Score=239.19 Aligned_cols=256 Identities=30% Similarity=0.398 Sum_probs=212.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC-C-CCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-P-PPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||+++++++++ .+++.+.|.|.|+++||+||+.++++|++|++.+.+.. . ....+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~ 78 (341)
T PRK05396 1 MKALVKLKAEP--GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG 78 (341)
T ss_pred CceEEEecCCC--ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence 89999988774 49999999999999999999999999999999776532 1 11235678999999999999999999
Q ss_pred CCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
+++||+|++.. .+|+|++|+.++.+.++++|+++++++++.+ .++.++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~ 157 (341)
T PRK05396 79 FKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTA 157 (341)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHH
Confidence 99999998751 3689999999999999999999999888744 5556665554
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.. ...+|++++|.|+ |++|.+++++++..|+ +++++++++++.+.++++|++.+++.+..++.+.+.+...++++|
T Consensus 158 ~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (341)
T PRK05396 158 LS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFD 234 (341)
T ss_pred Hc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCC
Confidence 32 3468999999875 9999999999999999 688888888888888999999998888777888887777777899
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++||+.|. ......+++++++|+++.+|..... ..++...+..+++++.++.
T Consensus 235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~ 287 (341)
T PRK05396 235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD-MAIDWNKVIFKGLTIKGIY 287 (341)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-CcccHHHHhhcceEEEEEE
Confidence 99999886 4578889999999999999875432 3444566777788887765
No 92
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=9.5e-33 Score=240.75 Aligned_cols=254 Identities=27% Similarity=0.419 Sum_probs=211.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||++++.+++ .+++++.|.|.+ .++||+||+.++++|++|++.+.|.++. ..|.++|||++|+|+++|++++.+
T Consensus 1 m~~~~~~~~~---~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~~ 75 (375)
T cd08282 1 MKAVVYGGPG---NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVESL 75 (375)
T ss_pred CceEEEecCC---ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCcC
Confidence 8999998765 499999999986 7999999999999999999999887652 357899999999999999999999
Q ss_pred CCCCEEEEE-------e------------------------------cCCeeeeEEeeeCC--CeEECCCCCCHH---hh
Q 024011 80 KVGDQVCAL-------L------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLK---DA 117 (274)
Q Consensus 80 ~~Gd~V~~~-------~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~---~a 117 (274)
++||+|+.. + .+|+|++|+.+|.+ .++++|++++++ ++
T Consensus 76 ~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~ 155 (375)
T cd08282 76 KVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY 155 (375)
T ss_pred CCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence 999999862 1 13889999999976 899999999998 56
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcH
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF 196 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 196 (274)
+.+..+..++|+++ ...++++|++++|.|+ |++|++++++++..|+ +++++++++++.+.++++|+. .++.+..++
T Consensus 156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~ 232 (375)
T cd08282 156 LMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSDGDP 232 (375)
T ss_pred eeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCcccH
Confidence 77888999999998 7788999999999875 9999999999999998 799988999999999999984 456666677
Q ss_pred HHHHHHHhCCCCccEEEECCChhh------------HHHhhhccccCCEEEEEecCCCC------------ccccchhhH
Q 024011 197 VARVKEETGGKGVDVILDCMGASY------------FQRNLGSLNIDGRLFIIGTQGGA------------KTELNITSL 252 (274)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~~~------------~~~~~~~l~~~g~~v~~g~~~~~------------~~~~~~~~~ 252 (274)
.+.+.+.++ +++|+++|+.|... +...+++++++|+++.+|..... ...+++..+
T Consensus 233 ~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (375)
T cd08282 233 VEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLL 311 (375)
T ss_pred HHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHH
Confidence 777777666 57999999998753 67889999999999988764321 123455556
Q ss_pred hhcceEEEEee
Q 024011 253 FAKRLTVQGIV 263 (274)
Q Consensus 253 ~~~~~~i~g~~ 263 (274)
..++..+.+..
T Consensus 312 ~~~~~~~~~~~ 322 (375)
T cd08282 312 WAKGLSFGTGQ 322 (375)
T ss_pred HhcCcEEEEec
Confidence 66666665543
No 93
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1e-32 Score=236.00 Aligned_cols=258 Identities=23% Similarity=0.357 Sum_probs=213.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.++++++.+++++.|.|.|+++||+||+.++++|++|.....|.++....+|.++|||++|+|+. +++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 99999999887767999999999999999999999999999999988776543333577889999999998 7777899
Q ss_pred CCCEEEEEe------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH--hhcCCC-CCCEEEEecCCch
Q 024011 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLS-PGESFLVHGGSSG 151 (274)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~-~g~~vlI~Ga~g~ 151 (274)
+||+|+++. .+|+|++|+.++.+.++++|+++++++++.++.++++++.++. +..... ++++++|+|++|+
T Consensus 79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~ 158 (324)
T cd08288 79 PGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGG 158 (324)
T ss_pred CCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcH
Confidence 999999863 2589999999999999999999999999999999999887653 123444 5789999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccC
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (274)
+|.+++++++..|+++++++.++++.+.++++|++.+++....+. .+.....+ ++|.++|+++.......+..++.+
T Consensus 159 vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~ 235 (324)
T cd08288 159 VGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSE--PGRPLQKE-RWAGAVDTVGGHTLANVLAQTRYG 235 (324)
T ss_pred HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH--hhhhhccC-cccEEEECCcHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999988887654322 33444333 489999999976677788888999
Q ss_pred CEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
|+++.+|.........+...++.+++++.++.
T Consensus 236 g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 236 GAVAACGLAGGADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred CEEEEEEecCCCCCCcchhhhhccccEEEEEE
Confidence 99999987643222345555557888888864
No 94
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=9e-33 Score=238.06 Aligned_cols=255 Identities=29% Similarity=0.414 Sum_probs=207.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC----------CCCCCCCCCCCceeEEEE
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----------PPKGASPYPGLECSGTIL 70 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V~ 70 (274)
|||+++... .+++++.+.|+++++||+||+.++++|+.|++...|... .....|.++|+|++|+|+
T Consensus 1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~ 76 (341)
T cd08262 1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV 76 (341)
T ss_pred CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence 899999865 399999999999999999999999999999998877321 122347789999999999
Q ss_pred EecCCCCC-CCCCCEEEEEe-----------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 71 SVGKNVSR-WKVGDQVCALL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 71 ~vG~~~~~-~~~Gd~V~~~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
++|++++. |++||+|+++. .+|+|++|+.++.+.++++|+++++++++ ++.++.++|+++
T Consensus 77 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~- 154 (341)
T cd08262 77 DYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV- 154 (341)
T ss_pred EeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-
Confidence 99999987 99999999872 36899999999999999999999999887 667888999885
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHH---HHHHHhCCCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA---RVKEETGGKG 208 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~ 208 (274)
...++++|++++|+|+ +++|.+++|+++..|++ ++++++++++.+.+++++++.+++.+..+..+ .+.+...+++
T Consensus 155 ~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 233 (341)
T cd08262 155 RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPK 233 (341)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCC
Confidence 7788999999999985 99999999999999997 66666788888888999998888866543222 3444555667
Q ss_pred ccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 209 ~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+++|+.|+ .....++++++++|+++.+|...... .........+++++.++.
T Consensus 234 ~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 288 (341)
T cd08262 234 PAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD-NIEPALAIRKELTLQFSL 288 (341)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC-ccCHHHHhhcceEEEEEe
Confidence 9999999987 46788899999999999998764322 223223345667766544
No 95
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.7e-32 Score=233.36 Aligned_cols=259 Identities=37% Similarity=0.538 Sum_probs=223.2
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
||+..+.++.+..+++.+.+.+.+.++||+|++.++++|++|++...+.++. .+|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFKV 78 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCCC
Confidence 5777777777667888888877789999999999999999999988776543 34668999999999999999999999
Q ss_pred CCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHH
Q 024011 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (274)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~ 161 (274)
||+|+++...|+|++|+.++.+.++++|+++++++++.++....++++++.+..++++|++++|+|+++++|.+++++++
T Consensus 79 G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~ 158 (320)
T cd05286 79 GDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAK 158 (320)
T ss_pred CCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 99999884368899999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred HcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..|++++++++++++.+.++++|.+.+++....++.+.+.+.+.+.++|.++++.++......+++++++|+++.+|...
T Consensus 159 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 238 (320)
T cd05286 159 ALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNAS 238 (320)
T ss_pred HcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCC
Confidence 99999999999999999999999988887777677777877777778999999999877888999999999999998755
Q ss_pred CCccccchhhHhhcceEEEEe
Q 024011 242 GAKTELNITSLFAKRLTVQGI 262 (274)
Q Consensus 242 ~~~~~~~~~~~~~~~~~i~g~ 262 (274)
.....++...+..+++++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~ 259 (320)
T cd05286 239 GPVPPFDLLRLSKGSLFLTRP 259 (320)
T ss_pred CCCCccCHHHHHhcCcEEEEE
Confidence 432334444444667777644
No 96
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.3e-32 Score=236.30 Aligned_cols=253 Identities=33% Similarity=0.502 Sum_probs=212.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++++++ .+++++.+.|++.++||+||+.++++|+.|.....|.++.. +|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~--~p~~~g~~~~G~v~~vG~~v~~~~ 75 (334)
T cd08234 1 MKALVYEGPG---ELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA--PPLVPGHEFAGVVVAVGSKVTGFK 75 (334)
T ss_pred CeeEEecCCC---ceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC--CCcccccceEEEEEEeCCCCCCCC
Confidence 8999998776 48899999999999999999999999999999988876532 577899999999999999999999
Q ss_pred CCCEEEEE---------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 81 VGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 81 ~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
+||+|++. ..+|+|++|+.++.+.++++|+++++.+++.+ .+..++++++ +
T Consensus 76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~ 153 (334)
T cd08234 76 VGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-D 153 (334)
T ss_pred CCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-H
Confidence 99999871 13589999999999999999999999998765 7788899888 7
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
..++++|++++|+|+ |.+|.+++++++..|++ ++++++++++.+.+++++.+.+++.+..++... +.+.+.++|++
T Consensus 154 ~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~vd~v 230 (334)
T cd08234 154 LLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ--KEDNPYGFDVV 230 (334)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHH--HHhcCCCCcEE
Confidence 788999999999975 99999999999999997 888899999999888899888887766665544 44555679999
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCC-CccccchhhHhhcceEEEEee
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+.|. ......+++++++|+++.+|.... ....++...++.+++++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (334)
T cd08234 231 IEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSF 283 (334)
T ss_pred EECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEec
Confidence 999975 457788999999999999987643 223444444555677777654
No 97
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.8e-32 Score=236.37 Aligned_cols=254 Identities=29% Similarity=0.441 Sum_probs=210.3
Q ss_pred EEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCC-CCC-CCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-YPP-PKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 3 a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~-~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|++++++. .+++++.+.|.+.++||+||+.++++|+.|++.+.+. ... ....|.++|+|++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~---~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (343)
T cd05285 1 AAVLHGPG---DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLK 77 (343)
T ss_pred CceEecCC---ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCC
Confidence 35666664 3889999999999999999999999999999876432 111 112466889999999999999999999
Q ss_pred CCCEEEE------------------------Ee----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA------------------------LL----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~------------------------~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|++ +. .+|+|++|+.++.+.++++|+++++++++.+ .++.++++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~- 155 (343)
T cd05285 78 VGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC- 155 (343)
T ss_pred CCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 9999986 21 2589999999999999999999999998866 6788898887
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcH---HHHHHHHhCCCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDF---VARVKEETGGKG 208 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~ 208 (274)
....+++|++++|.|+ |++|++++++++..|++ |+++++++++.+.+++++.+.+++.+..++ .+.+.+.+.+++
T Consensus 156 ~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T cd05285 156 RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKG 234 (343)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCC
Confidence 7789999999999875 89999999999999997 888888899988889999999888776654 677777777778
Q ss_pred ccEEEECCChh-hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 209 VDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 209 ~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+++|+.|.. .....+++++++|+++.+|..... ..+++.....+++++.++.
T Consensus 235 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 289 (343)
T cd05285 235 PDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVF 289 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEec
Confidence 99999999975 678899999999999999865432 3455555666777777654
No 98
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3e-32 Score=235.18 Aligned_cols=255 Identities=30% Similarity=0.497 Sum_probs=212.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
||+++++++++ +++++.|.|.| +++||+||+.++++|++|+..+.|.++. ..|.++|||++|+|+++|+++..+
T Consensus 1 m~~~~~~~~~~---~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (345)
T cd08287 1 MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTSV 75 (345)
T ss_pred CceeEEecCCc---eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCcc
Confidence 89999987664 88999999986 8999999999999999999888876542 347789999999999999999999
Q ss_pred CCCCEEEE-Ee--------------------------cCCeeeeEEeeeCC--CeEECCCCCCHHhhc-----cCcchHH
Q 024011 80 KVGDQVCA-LL--------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAA-----AFPEVAC 125 (274)
Q Consensus 80 ~~Gd~V~~-~~--------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa-----~l~~~~~ 125 (274)
++||+|++ .. .+|+|++|+.++.+ .++++|++++++.+. ++...+.
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~ 155 (345)
T cd08287 76 KPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG 155 (345)
T ss_pred CCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence 99999987 21 13889999999975 999999999883221 2235678
Q ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
++++++ ....+++|++++|.| .|++|.+++++++..|++ ++++++++++.+.++++|++.+++....++.+.+.+..
T Consensus 156 ~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~ 233 (345)
T cd08287 156 TGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELT 233 (345)
T ss_pred HHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhc
Confidence 888887 467889999999977 599999999999999996 77777787788888899999999888878888888877
Q ss_pred CCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 205 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
++.++|.++|+.|+ ..+..++++++++|+++.++.... ...++....+.+++++.+..
T Consensus 234 ~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 234 GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGP 292 (345)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEec
Confidence 77789999999986 457889999999999999987653 33455545677888887754
No 99
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3.5e-32 Score=237.85 Aligned_cols=247 Identities=28% Similarity=0.410 Sum_probs=205.5
Q ss_pred eEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC------CCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEE-
Q 024011 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY------PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA- 87 (274)
Q Consensus 15 ~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~- 87 (274)
+++++.|.|+++++||+||+.++++|++|++.+.+.. +....+|.++|||++|+|+++|++++.|++||+|++
T Consensus 39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 118 (384)
T cd08265 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE 118 (384)
T ss_pred EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence 8999999999999999999999999999998876421 222345789999999999999999999999999985
Q ss_pred --------------------------EecCCeeeeEEeeeCCCeEECCCCC-------CHHhhccCcchHHHHHHHHHhh
Q 024011 88 --------------------------LLGGGGYAEKVAVPAGQVLPVPSGV-------SLKDAAAFPEVACTVWSTVFMT 134 (274)
Q Consensus 88 --------------------------~~~~g~~~~~~~~~~~~~~~~p~~~-------~~~~aa~l~~~~~~a~~~l~~~ 134 (274)
+..+|+|++|+.++.+.++++|+.+ +++ +++++.+++++|+++...
T Consensus 119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~ 197 (384)
T cd08265 119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR 197 (384)
T ss_pred CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence 3336899999999999999999863 455 555778889999998655
Q ss_pred -cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCC---cHHHHHHHHhCCCCc
Q 024011 135 -SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGV 209 (274)
Q Consensus 135 -~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~ 209 (274)
.++++|++++|+|+ |++|++++++++..|+ +|+++++++++.+.++++|.+.+++.+.. ++.+.+.+.+.++++
T Consensus 198 ~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gv 276 (384)
T cd08265 198 GGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGA 276 (384)
T ss_pred cCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCC
Confidence 68999999999975 9999999999999999 79999988888888899999888876643 677788888887889
Q ss_pred cEEEECCChh--hHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 210 DVILDCMGAS--YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 210 d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
|+++|+.|.. .+...++.++++|+++.+|.... ...++...+..+..++.++..
T Consensus 277 Dvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~ 332 (384)
T cd08265 277 DIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQG 332 (384)
T ss_pred CEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeec
Confidence 9999999863 57888999999999999986543 234455556666777777653
No 100
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=9.5e-33 Score=238.70 Aligned_cols=236 Identities=35% Similarity=0.539 Sum_probs=203.2
Q ss_pred CEEEEEcCCCCCc-ceEEEeecCCCC-CCCeEEEEEeeeecChhhhHhhcCCCCC--------------CCCCCCCCCCc
Q 024011 1 MKAIVITQPGSPE-VLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPP--------------PKGASPYPGLE 64 (274)
Q Consensus 1 m~a~~~~~~~~~~-~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~D~~~~~g~~~~--------------~~~~p~~~G~e 64 (274)
|||++++++++++ .+++++.+.|.| +++||+||+.++++|++|.+...|.... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 8999999888753 488899999999 5999999999999999999988774210 12347789999
Q ss_pred eeEEEEEecCCCCCCCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCC--
Q 024011 65 CSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-- 139 (274)
Q Consensus 65 ~~G~V~~vG~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-- 139 (274)
++|+|+++|+++..+++||+|+++. .+|+|++|+.++.+.++++|+++++++++.++++..++|+++.+...+.+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 160 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN 160 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence 9999999999999999999999875 26899999999999999999999999999999999999999877777654
Q ss_pred --CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 140 --GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 140 --g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
|++++|+|++|++|++++++++..|++|+++.++ ++.+.+++++.+.+++....++.+.+.. ..++|+++|+.|
T Consensus 161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~---~~~vd~vi~~~g 236 (350)
T cd08248 161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTE---RGKFDVILDTVG 236 (350)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHh---cCCCCEEEECCC
Confidence 9999999999999999999999999999988865 5677778899888888766555555543 356999999999
Q ss_pred hhhHHHhhhccccCCEEEEEecC
Q 024011 218 ASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.......+++++++|+++.++..
T Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 237 GDTEKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred hHHHHHHHHHhccCCEEEEecCC
Confidence 88888999999999999999754
No 101
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=8.9e-32 Score=229.33 Aligned_cols=263 Identities=42% Similarity=0.676 Sum_probs=224.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (274)
|||+++..++....+++.+.+ |.+. +++++|++.++++|++|+....+.+......|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 899999977766668888877 7666 49999999999999999998877654323346688999999999999999999
Q ss_pred CCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHH
Q 024011 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
++||+|+++...|++++|+.++.+.++++|+++++.+++.+..+..+++.++.+...++++++++|+|+++++|.+++++
T Consensus 80 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~ 159 (323)
T cd08241 80 KVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQL 159 (323)
T ss_pred CCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 99999999864689999999999999999999999998888899999999987778899999999999999999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEec
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (274)
++..|++|+.+++++++.+.+++++.+..++....++.+.+.+.+.+.++|.++++.|......++++++++|+++.++.
T Consensus 160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~ 239 (323)
T cd08241 160 AKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGF 239 (323)
T ss_pred HHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEcc
Confidence 99999999999999999999988898888877777777788877777789999999998778889999999999999987
Q ss_pred CCCCccccchhhHhhcceEEEEeec
Q 024011 240 QGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
.......++....+.+++++.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 240 ASGEIPQIPANLLLLKNISVVGVYW 264 (323)
T ss_pred CCCCcCcCCHHHHhhcCcEEEEEec
Confidence 5433222334345667788777653
No 102
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.5e-32 Score=233.46 Aligned_cols=239 Identities=44% Similarity=0.633 Sum_probs=204.8
Q ss_pred EEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCC---CCCCCCCCceeEE---EEEec-CCC
Q 024011 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK---GASPYPGLECSGT---ILSVG-KNV 76 (274)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~G~e~~G~---V~~vG-~~~ 76 (274)
.+...++.......++.+.|.|.+++++|++.++++|+.|+.+..|.+.... .+|.+++.++.|. +...| ..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~ 88 (347)
T KOG1198|consen 9 SLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVV 88 (347)
T ss_pred EEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccc
Confidence 3444445555666788999999999999999999999999999999887655 6775555555554 44555 334
Q ss_pred CCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhc------CCCCCCEEEEecCCc
Q 024011 77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS------HLSPGESFLVHGGSS 150 (274)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~------~~~~g~~vlI~Ga~g 150 (274)
..+..||++.....+|+|+||.++|...++++|++++++++++++.++.+||.++.... +.++|+++||+|++|
T Consensus 89 ~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsg 168 (347)
T KOG1198|consen 89 GGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSG 168 (347)
T ss_pred cceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCc
Confidence 56888888888888899999999999999999999999999999999999999999988 899999999999999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcccc
Q 024011 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (274)
Q Consensus 151 ~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (274)
++|.+++|+|+..++..++++++++..+.++++|++.++|+++.++.+.+.+.+ +.++|+|+||.|+........++..
T Consensus 169 gVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~~~~~~~~~~l~~ 247 (347)
T KOG1198|consen 169 GVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGGSTLTKSLSCLLK 247 (347)
T ss_pred HHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCCCccccchhhhcc
Confidence 999999999999997777778899999999999999999999999999999888 7789999999999877788888888
Q ss_pred CCEEEEEecCCCC
Q 024011 231 DGRLFIIGTQGGA 243 (274)
Q Consensus 231 ~g~~v~~g~~~~~ 243 (274)
+|+...++..++.
T Consensus 248 ~g~~~~i~~~~~~ 260 (347)
T KOG1198|consen 248 GGGGAYIGLVGDE 260 (347)
T ss_pred CCceEEEEecccc
Confidence 8876666555533
No 103
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.4e-32 Score=231.29 Aligned_cols=237 Identities=32% Similarity=0.542 Sum_probs=206.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
.||+++...+.+..+++++.+.|.|.++||+||+.++++|++|+....+.++....+|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 38999999888888999999999999999999999999999999988876654334677899999999999999999999
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
+||+|+++...|+|++|+.++.+.++++|+++++++++.++.+..++|+++.+...+++|++++|+|++|++|+++++++
T Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a 160 (331)
T cd08273 81 VGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELA 160 (331)
T ss_pred CCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 99999998656899999999999999999999999999999999999999877788999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+..|++|++++. +++.+.++++|+.. ++.+..++... +.. .+++|.++++.|+......+++++.+|+++.+|..
T Consensus 161 ~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~--~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~ 235 (331)
T cd08273 161 LLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPA--MLT-PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGN 235 (331)
T ss_pred HHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhh--hcc-CCCceEEEECCchHHHHHHHHHhcCCCEEEEEccC
Confidence 999999999987 77888888888654 44444444333 222 34799999999988788899999999999999876
Q ss_pred CC
Q 024011 241 GG 242 (274)
Q Consensus 241 ~~ 242 (274)
..
T Consensus 236 ~~ 237 (331)
T cd08273 236 SS 237 (331)
T ss_pred CC
Confidence 53
No 104
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-31 Score=228.94 Aligned_cols=239 Identities=38% Similarity=0.620 Sum_probs=211.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.++++...+++++.+.|++.+++|+||+.++++|++|+....+..... ..|.++|||++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~ 79 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGWK 79 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcCC
Confidence 999999988843359999999999999999999999999999998887755321 2366889999999999999999999
Q ss_pred CCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHH
Q 024011 81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (274)
Q Consensus 81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~ 157 (274)
+||+|+++. .+|+|++|+.++.+.++++|+++++.+++.+.++..++++++.+...+++|++++|+|+++++|++++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~ 159 (325)
T cd08271 80 VGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAV 159 (325)
T ss_pred CCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHH
Confidence 999999885 36889999999999999999999999999999999999999988888999999999999899999999
Q ss_pred HHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEE
Q 024011 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 158 ~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~ 237 (274)
++++..|++++++. ++++.+.+.++|.+.+++....++.+.+.+...++++|.++++.++......+++++++|+++.+
T Consensus 160 ~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~ 238 (325)
T cd08271 160 QLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCI 238 (325)
T ss_pred HHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEE
Confidence 99999999998887 66777888888988888877777777788777777899999999987777789999999999998
Q ss_pred ecCC
Q 024011 238 GTQG 241 (274)
Q Consensus 238 g~~~ 241 (274)
+...
T Consensus 239 ~~~~ 242 (325)
T cd08271 239 QGRP 242 (325)
T ss_pred cCCC
Confidence 7543
No 105
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=2.1e-31 Score=228.36 Aligned_cols=257 Identities=26% Similarity=0.387 Sum_probs=212.3
Q ss_pred EEEEEcCCC----CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC--CCCCCCCCCCCceeEEEEEecCC
Q 024011 2 KAIVITQPG----SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKN 75 (274)
Q Consensus 2 ~a~~~~~~~----~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~ 75 (274)
|+|+++... .++.+++++.+.|++.++||+||+.++++|++|.....+... .+...+.++|+|++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 678887655 457899999999999999999999999999988765554321 11123457899999999999964
Q ss_pred CCCCCCCCEEEEEecCCeeeeEEeeeC-CCeEECCCCCC--HHhhcc-CcchHHHHHHHHHhhcCCCCCCEEEEecCCch
Q 024011 76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVS--LKDAAA-FPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151 (274)
Q Consensus 76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p~~~~--~~~aa~-l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~ 151 (274)
.+++||+|+++ ++|++|+.++. +.++++|++++ +.+++. ++++..++|+++.....+.++++++|+|++++
T Consensus 83 --~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ 157 (329)
T cd05288 83 --DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGA 157 (329)
T ss_pred --CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcch
Confidence 79999999887 47999999999 99999999985 445544 88999999999877788899999999999899
Q ss_pred HHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhcccc
Q 024011 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (274)
Q Consensus 152 iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (274)
+|++++++++..|++++++++++++.+.+++ ++.+.+++.+..++.+.+.+..+ +++|+++|++|...+...++++++
T Consensus 158 ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~~~g~~~~~~~~~~l~~ 236 (329)
T cd05288 158 VGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-DGIDVYFDNVGGEILDAALTLLNK 236 (329)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-CCceEEEEcchHHHHHHHHHhcCC
Confidence 9999999999999999999999999998887 99988888877777777777664 679999999998888899999999
Q ss_pred CCEEEEEecCCCCccc-----cchhhHhhcceEEEEeec
Q 024011 231 DGRLFIIGTQGGAKTE-----LNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 231 ~g~~v~~g~~~~~~~~-----~~~~~~~~~~~~i~g~~~ 264 (274)
+|+++.+|........ ++...++.++.++.++..
T Consensus 237 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (329)
T cd05288 237 GGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIV 275 (329)
T ss_pred CceEEEEeeccCcccccccccccHHHHhhCcceEEeecc
Confidence 9999999865543211 234556677888887653
No 106
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=2.3e-31 Score=231.30 Aligned_cols=257 Identities=25% Similarity=0.373 Sum_probs=205.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
|+++++..+. .+++++.+.|.|+++||+||+.++++|++|.+...+.... ....|.++|||++|+|+++|+++++
T Consensus 18 ~~~~~~~~~~---~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 18 NMAAWLVGVN---TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cceEEEecCC---ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 4455565543 3888888888899999999999999999999988763211 1124678999999999999999999
Q ss_pred CCCCCEEEEE------------------------e----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 79 WKVGDQVCAL------------------------L----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 79 ~~~Gd~V~~~------------------------~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
|++||+|++. . .+|+|++|+.++.+.++++|+++++++++. ..++.+++++
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~ 173 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHA 173 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHH
Confidence 9999999862 1 158999999999999999999999998874 2455567877
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCC--CCcHHHHHHHH--hC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK--TEDFVARVKEE--TG 205 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~--~~ 205 (274)
+ ...++.+|++++|+|+ |++|.+++++++..|++ ++++++++++.+.++++|++..++.+ ..++.+.+.+. ..
T Consensus 174 ~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T PLN02702 174 C-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAM 251 (364)
T ss_pred H-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhc
Confidence 7 6778899999999975 99999999999999995 67777888888888899998877643 34566665543 23
Q ss_pred CCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 206 ~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
+.++|++||+.|. ..+...+++++++|+++.+|..... ..++...+..+++++.+++.
T Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 252 GGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE-MTVPLTPAAAREVDVVGVFR 310 (364)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC-CcccHHHHHhCccEEEEecc
Confidence 4469999999994 5688999999999999999865432 34556667788888888764
No 107
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1e-31 Score=229.46 Aligned_cols=240 Identities=24% Similarity=0.369 Sum_probs=200.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|||+++.+++ .+++++.+.|+++++||+||+.++++|++|.+...|.++ .|.++|||++|+|+++|++ ++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~~ 70 (319)
T cd08242 1 MKALVLDGGL---DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---EL 70 (319)
T ss_pred CeeEEEeCCC---cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---CC
Confidence 8999998754 499999999999999999999999999999999888654 4678999999999999998 67
Q ss_pred CCCEEEE---------------------------E-ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHH
Q 024011 81 VGDQVCA---------------------------L-LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (274)
Q Consensus 81 ~Gd~V~~---------------------------~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (274)
+||+|.. + ..+|+|++|+.++.+.++++|++++.++++.+ .+..++|.++
T Consensus 71 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~- 148 (319)
T cd08242 71 VGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL- 148 (319)
T ss_pred CCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 9999863 1 12589999999999999999999999888754 4555666555
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+..+++++++++|+| .|.+|++++|+++..|+++++++.++++.+.++++|++...+.+.. +.+.++|++
T Consensus 149 ~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~d~v 218 (319)
T cd08242 149 EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE---------SEGGGFDVV 218 (319)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---------ccCCCCCEE
Confidence 677899999999997 5999999999999999999999999999999999998877665321 344679999
Q ss_pred EECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+.|. ..+...+++++++|+++..+.... ...++...+..++.++.++.
T Consensus 219 id~~g~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~i~~~~ 269 (319)
T cd08242 219 VEATGSPSGLELALRLVRPRGTVVLKSTYAG-PASFDLTKAVVNEITLVGSR 269 (319)
T ss_pred EECCCChHHHHHHHHHhhcCCEEEEEcccCC-CCccCHHHheecceEEEEEe
Confidence 999987 457888899999999998765433 34556666777788888764
No 108
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.8e-31 Score=228.91 Aligned_cols=249 Identities=27% Similarity=0.398 Sum_probs=205.9
Q ss_pred CEEEEEcCCCCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++.+++++ ..+++++.+.|.+.++||+||+.++++|++|++...|.++. ...|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR 79 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence 899999988742 34778888888899999999999999999999998886654 345789999999999999999999
Q ss_pred CCCCCEEEEEe----------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
+++||+|+... .+|+|++|+.++.+.++++|+++++.+++.+.+++.++|++
T Consensus 80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 159 (329)
T cd08298 80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159 (329)
T ss_pred CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence 99999997621 25889999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
+ +.++++++++++|+| .|++|++++++++..|++|+++++++++.+.++++|.+..++.+.. .++++|
T Consensus 160 ~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~vD 227 (329)
T cd08298 160 L-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL----------PPEPLD 227 (329)
T ss_pred H-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc----------CCCccc
Confidence 8 788999999999998 4899999999999999999999999999999999998777665432 234699
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
.++++.+. ...+..++.++++|+++.+|........++... +.++..+.++.
T Consensus 228 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~ 280 (329)
T cd08298 228 AAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVA 280 (329)
T ss_pred EEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEec
Confidence 99998654 457889999999999998875432222233332 33455555544
No 109
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=9.6e-32 Score=223.83 Aligned_cols=237 Identities=39% Similarity=0.641 Sum_probs=204.6
Q ss_pred eEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEe-------------------
Q 024011 29 EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL------------------- 89 (274)
Q Consensus 29 ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~------------------- 89 (274)
||+|+|.++++|+.|+..+.+..+.....|.++|||++|+|+++|++++.|++||+|++..
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 6899999999999999999887652334577899999999999999999999999999875
Q ss_pred ----cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 024011 90 ----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (274)
Q Consensus 90 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~ 165 (274)
..|+|++|+.++.+.++++|+++++++++.++.++.++|+++.....++++++++|+|+++ +|++++++++..|.
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~ 159 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA 159 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence 2689999999999999999999999999999999999999998777778999999999866 99999999999999
Q ss_pred eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCc
Q 024011 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK 244 (274)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~ 244 (274)
+|+++++++++.+.+++++.+.+++....+..+.+. ...+.++|+++++++. ......++.++++|+++.++......
T Consensus 160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 238 (271)
T cd05188 160 RVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP 238 (271)
T ss_pred eEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCC
Confidence 999999999999999989988888777766666665 5556679999999998 67888999999999999998776543
Q ss_pred cccchhhHhhcceEEEEeecccc
Q 024011 245 TELNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 245 ~~~~~~~~~~~~~~i~g~~~~~~ 267 (274)
........+.+++++.++.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~ 261 (271)
T cd05188 239 PLDDLRRLLFKELTIIGSTGGTR 261 (271)
T ss_pred CcccHHHHHhcceEEEEeecCCH
Confidence 33335567788999999886543
No 110
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=3.1e-31 Score=227.47 Aligned_cols=253 Identities=30% Similarity=0.424 Sum_probs=210.4
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
|++++.+++. .+++++.+.|.+.++||+|++.++++|++|++.+.+.++. ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~~ 77 (330)
T cd08245 1 KAAVVHAAGG--PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRKV 77 (330)
T ss_pred CeEEEecCCC--CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCccccc
Confidence 6889988764 3899999999999999999999999999999998886643 235778999999999999999999999
Q ss_pred CCEEEE----------------------------EecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHh
Q 024011 82 GDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (274)
Q Consensus 82 Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (274)
||+|+. +..+|+|++|+.++.+.++++|+++++++++.+.+...++|+++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~ 157 (330)
T cd08245 78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD 157 (330)
T ss_pred CCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh
Confidence 999973 2235889999999999999999999999999999999999999855
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
.+++++++++|+|+ +++|++++++++..|++|+++++++++.+.+++++.+.+++....+.... .. +++|+++
T Consensus 158 -~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~-~~~d~vi 230 (330)
T cd08245 158 -AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA----AA-GGADVIL 230 (330)
T ss_pred -hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh----cc-CCCCEEE
Confidence 78899999999976 77999999999999999999999999999998899888876654443322 22 4699999
Q ss_pred ECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++.+. .....++++++++|+++.++.........+...++.++.++.++..
T Consensus 231 ~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (330)
T cd08245 231 VTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTH 282 (330)
T ss_pred ECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEecc
Confidence 99774 5578889999999999999865443333334456667777766654
No 111
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.5e-31 Score=214.60 Aligned_cols=244 Identities=25% Similarity=0.355 Sum_probs=205.7
Q ss_pred cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCC--CCCCCCCCceeEEEEEe--cCCCCCCCCCCEEEEE
Q 024011 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSV--GKNVSRWKVGDQVCAL 88 (274)
Q Consensus 13 ~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~v--G~~~~~~~~Gd~V~~~ 88 (274)
+.|++++.+.|+|++||||||+.+.+++|. ++|.+...+ -.|.-+|-..+|.++.. -|+.+.|++||.|.+.
T Consensus 25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~ 100 (340)
T COG2130 25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV 100 (340)
T ss_pred CCceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec
Confidence 569999999999999999999999999994 233332222 23566777776644432 2567889999999888
Q ss_pred ecCCeeeeEEeeeCCCeEECCCC---CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 024011 89 LGGGGYAEKVAVPAGQVLPVPSG---VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (274)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~p~~---~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~ 165 (274)
. +|++|..++.+.+.++.+. +++.. ..|.++..|||.+|.+.+++++|++++|.+|+|++|..+.|+++..|+
T Consensus 101 ~---GWq~y~i~~~~~l~Kvd~~~~pl~~~L-gvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~ 176 (340)
T COG2130 101 S---GWQEYAISDGEGLRKLDPSPAPLSAYL-GVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC 176 (340)
T ss_pred c---cceEEEeechhhceecCCCCCCcchHH-hhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC
Confidence 4 6999999999999999854 33333 358899999999999999999999999999999999999999999999
Q ss_pred eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCc
Q 024011 166 RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK 244 (274)
Q Consensus 166 ~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~ 244 (274)
+|+.+.-++++.+++++ +|.|..+|+..+++.+.+.+..+ .|+|+.|||+|+..++..+..|..++|+..||....+.
T Consensus 177 rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P-~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN 255 (340)
T COG2130 177 RVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACP-KGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYN 255 (340)
T ss_pred eEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCC-CCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcC
Confidence 99999999999999987 99999999999999999999887 58999999999999999999999999999999877543
Q ss_pred cc------cchhhHhhcceEEEEeecc
Q 024011 245 TE------LNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 245 ~~------~~~~~~~~~~~~i~g~~~~ 265 (274)
.. ..+..++.+.+++.|+...
T Consensus 256 ~~~~~~gp~~l~~l~~kr~~v~Gfiv~ 282 (340)
T COG2130 256 APELPPGPRRLPLLMAKRLRVQGFIVA 282 (340)
T ss_pred CCCCCCCcchhhHHHhhhheeEEEEec
Confidence 22 2245577889999999974
No 112
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.8e-31 Score=227.36 Aligned_cols=255 Identities=35% Similarity=0.450 Sum_probs=207.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCC--CCCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||+++++..+. .+++.+.+.|.|+++|++||+.++++|+.|...+.+.. ......|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~ 78 (341)
T cd05281 1 MKAIVKTKAGP--GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR 78 (341)
T ss_pred CcceEEecCCC--ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence 89999998765 48899999999999999999999999999998765431 111234668999999999999999999
Q ss_pred CCCCCEEEEEe---------------------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHH
Q 024011 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (274)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (274)
+++||+|+++. ..|+|++|++++.+.++++|++++++.+ ++..++.++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~ 157 (341)
T cd05281 79 VKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTV 157 (341)
T ss_pred CCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHH
Confidence 99999998841 3588999999999999999999998655 5667778888776
Q ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 132 ~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
. ...++|++++|.|+ |++|++++++++..|+ +++++++++++.+.++++|.+.+++.+..++. .+.+..+++++|
T Consensus 158 ~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~vd 233 (341)
T cd05281 158 L--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EVKSVTDGTGVD 233 (341)
T ss_pred H--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HHHHHcCCCCCC
Confidence 4 34578999999875 9999999999999999 78888888888888889999888887776777 778877777899
Q ss_pred EEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchh-hHhhcceEEEEee
Q 024011 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQGIV 263 (274)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 263 (274)
++||+.|. ......++.++++|+++.+|.... ....++. .+..++..+.++.
T Consensus 234 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 287 (341)
T cd05281 234 VVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGIT 287 (341)
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-CcccccchhhhccceEEEEEe
Confidence 99999976 457888999999999999986544 2233322 2555667776654
No 113
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=3.4e-31 Score=229.27 Aligned_cols=237 Identities=33% Similarity=0.495 Sum_probs=194.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCC-CCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCC-C
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-R 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~-~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~-~ 78 (274)
+|++++..++++..++..+.+.|. +.++||+||+.++++|++|+....+........|.++|+|++|+|+++|++++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 589999998887555555555553 49999999999999999999887543222122367899999999999999998 8
Q ss_pred CCCCCEEEEEe-----cCCeeeeEEeeeCC----CeEECCCCCCHHhhccCcchHHHHHHHHHhhc-CCCCCCEEEEecC
Q 024011 79 WKVGDQVCALL-----GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGG 148 (274)
Q Consensus 79 ~~~Gd~V~~~~-----~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~-~~~~g~~vlI~Ga 148 (274)
|++||+|+++. .+|+|++|++++.. .++++|+++++++++.++.+..++|+++.+.. .+++|++++|+|+
T Consensus 81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga 160 (352)
T cd08247 81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGG 160 (352)
T ss_pred CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECC
Confidence 99999999875 26899999999987 78999999999999999999999999987776 7999999999999
Q ss_pred CchHHHHHHHHHHHc-CC-eEEEEecChhhHHHHHHcCCCEEEeCCCCc---HHHHHHHHhC-CCCccEEEECCCh-hhH
Q 024011 149 SSGIGTFAIQMGKCQ-GV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKEETG-GKGVDVILDCMGA-SYF 221 (274)
Q Consensus 149 ~g~iG~~~~~~~~~~-g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~-~~~~d~vi~~~g~-~~~ 221 (274)
++++|.+++++++.. +. +++++. ++++.+.++++|.+.+++.+..+ +...+.+... ++++|.+||+.|+ ...
T Consensus 161 ~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~ 239 (352)
T cd08247 161 STSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLF 239 (352)
T ss_pred CchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHH
Confidence 999999999999987 45 566665 55556677889998888876655 5555555443 5689999999998 567
Q ss_pred HHhhhccc---cCCEEEEEe
Q 024011 222 QRNLGSLN---IDGRLFIIG 238 (274)
Q Consensus 222 ~~~~~~l~---~~g~~v~~g 238 (274)
...+++++ ++|+++.++
T Consensus 240 ~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 240 PHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred HHHHHHhCccCCCCEEEEEe
Confidence 78889999 999999875
No 114
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=4.7e-31 Score=227.32 Aligned_cols=250 Identities=32% Similarity=0.426 Sum_probs=204.1
Q ss_pred cCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC--CCCCCCCCCCCceeEEEEEecCCCCCCCCCCE
Q 024011 7 TQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSRWKVGDQ 84 (274)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~ 84 (274)
++++.+ +++++.|.|.|+++||+||+.++++|++|...+.+... ....+|.++|+|++|+|+++|+++++|++||+
T Consensus 5 ~~~~~~--~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 82 (340)
T TIGR00692 5 TKPGYG--AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDY 82 (340)
T ss_pred ccCCCC--cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCE
Confidence 455554 88899999999999999999999999999987655321 11234668999999999999999999999999
Q ss_pred EEEE---------------------------ecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCC
Q 024011 85 VCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL 137 (274)
Q Consensus 85 V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 137 (274)
|++. ...|+|++|++++.+.++++|++++++++ +++.++.++++++ ....
T Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~ 159 (340)
T TIGR00692 83 VSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGP 159 (340)
T ss_pred EEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccC
Confidence 9872 24589999999999999999999998665 4677888888876 3457
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
++|++++|.|+ |++|.+++++++..|++ |+++++++++.+.+++++.+.+++....++.+.+.+..+++++|+++|+.
T Consensus 160 ~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~ 238 (340)
T TIGR00692 160 ISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMS 238 (340)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECC
Confidence 78999999774 99999999999999996 88887888888888899998888887778888888877777899999998
Q ss_pred Ch-hhHHHhhhccccCCEEEEEecCCCCccccchh-hHhhcceEEEEee
Q 024011 217 GA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQGIV 263 (274)
Q Consensus 217 g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 263 (274)
|. ......+++++++|+++.+|..... ..++.. .++.+++++.+..
T Consensus 239 g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 286 (340)
T TIGR00692 239 GAPKALEQGLQAVTPGGRVSLLGLPPGK-VTIDFTNKVIFKGLTIYGIT 286 (340)
T ss_pred CCHHHHHHHHHhhcCCCEEEEEccCCCC-cccchhhhhhhcceEEEEEe
Confidence 85 4578889999999999999875432 233333 4566777777654
No 115
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=6.2e-31 Score=223.72 Aligned_cols=246 Identities=25% Similarity=0.350 Sum_probs=205.7
Q ss_pred cceEEEeecCCCCCCCeEEEEEeeeecChhhhHhh-cCCCCC-CCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEec
Q 024011 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPP-PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90 (274)
Q Consensus 13 ~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~-~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 90 (274)
+.+++++.+.|++.++||+||+.++++|++|++.+ .+.... ....|.++|+|++|+|+.+|++++.+++||+|+++.
T Consensus 5 ~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 83 (312)
T cd08269 5 GRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS- 83 (312)
T ss_pred CeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 35999999999999999999999999999999887 665422 122467899999999999999999999999999885
Q ss_pred CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEE
Q 024011 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFV 169 (274)
Q Consensus 91 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~ 169 (274)
.|+|++|+.++.+.++++|+++ ..++.+..++.++++++. ..+++++++++|+| .|++|.+++++++..|++ +++
T Consensus 84 ~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~ 159 (312)
T cd08269 84 GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIA 159 (312)
T ss_pred CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEE
Confidence 5889999999999999999988 233322377888888885 78889999999997 589999999999999998 999
Q ss_pred EecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccc
Q 024011 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELN 248 (274)
Q Consensus 170 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 248 (274)
+++++++.+.++++|.+.+++.+..++.+.+.+.+.+.++|+++|+.|. ......+++++++|+++.+|........++
T Consensus 160 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~ 239 (312)
T cd08269 160 IDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVP 239 (312)
T ss_pred ECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccC
Confidence 9998888888889999888887777888888888777789999999975 457888999999999999986643334455
Q ss_pred hhhHhhcceEEEEee
Q 024011 249 ITSLFAKRLTVQGIV 263 (274)
Q Consensus 249 ~~~~~~~~~~i~g~~ 263 (274)
+..+..+++++.++.
T Consensus 240 ~~~~~~~~~~~~~~~ 254 (312)
T cd08269 240 FQTWNWKGIDLINAV 254 (312)
T ss_pred HHHHhhcCCEEEEec
Confidence 555666777776654
No 116
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=8.7e-31 Score=225.54 Aligned_cols=248 Identities=27% Similarity=0.411 Sum_probs=199.1
Q ss_pred EEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhc-CCCCC-CCCCCCCCCCceeEEEEEecCCCCCCCCC
Q 024011 5 VITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSRWKVG 82 (274)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 82 (274)
++++++ .+++++.+.|.++++||+||+.++++|++|++... +.+.. ....|.++|+|++|+|+++|+++++|++|
T Consensus 2 ~~~~~~---~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~G 78 (339)
T cd08232 2 VIHAAG---DLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPG 78 (339)
T ss_pred eeccCC---ceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCC
Confidence 455554 49999999999999999999999999999998764 32211 12346789999999999999999999999
Q ss_pred CEEEEE-------------------------e-------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHH
Q 024011 83 DQVCAL-------------------------L-------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (274)
Q Consensus 83 d~V~~~-------------------------~-------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (274)
|+|++. . .+|+|++|+.++.+.++++|+++++++++. ..++.++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~ 157 (339)
T cd08232 79 QRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHA 157 (339)
T ss_pred CEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHH
Confidence 999862 1 258999999999999999999999999875 5788899998
Q ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHh-CCCC
Q 024011 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET-GGKG 208 (274)
Q Consensus 131 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 208 (274)
+.+.... ++++|||.|+ +++|.+++++++..|+ +++++++++++.+.+++++.+.+++.+..++ .+.. ...+
T Consensus 158 l~~~~~~-~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~----~~~~~~~~~ 231 (339)
T cd08232 158 VNRAGDL-AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPL----AAYAADKGD 231 (339)
T ss_pred HHhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhh----hhhhccCCC
Confidence 8666556 8999999875 8999999999999999 8999988888888888899888887665442 2222 2345
Q ss_pred ccEEEECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEee
Q 024011 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 209 ~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 263 (274)
+|+++|+.|. ......++.++++|+++.++... .....+...++.+++++.+..
T Consensus 232 vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 286 (339)
T cd08232 232 FDVVFEASGAPAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSF 286 (339)
T ss_pred ccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEe
Confidence 9999999985 45788899999999999998654 223344555566777777654
No 117
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=2e-30 Score=219.73 Aligned_cols=236 Identities=37% Similarity=0.637 Sum_probs=204.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCC--CCCCCCCCCCCceeEEEEEecCCCCC
Q 024011 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR 78 (274)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (274)
||++++..++....+++++.+.|.++++||+||+.++++|++|...+.+... .....|..+|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 8999999887766677888888888999999999999999999998877543 12234778999999999999999999
Q ss_pred CCCCCEEEEEe---cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Q 024011 79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (274)
Q Consensus 79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~ 155 (274)
+++||+|+++. .+|+|++|+.++...++++|+++++.+++.+.....++++++.....+.+|++++|+|+++.+|.+
T Consensus 81 ~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~ 160 (309)
T cd05289 81 FKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSF 160 (309)
T ss_pred CCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Confidence 99999999885 258899999999999999999999999998999999999998777778999999999998999999
Q ss_pred HHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEE
Q 024011 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 156 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (274)
++++++..|++++++++++ +.+.+++++.+..++....++.. ...+.++|.++++.|+......+++++++|+++
T Consensus 161 ~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v 235 (309)
T cd05289 161 AVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFER----AAAPGGVDAVLDTVGGETLARSLALVKPGGRLV 235 (309)
T ss_pred HHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhh----ccCCCCceEEEECCchHHHHHHHHHHhcCcEEE
Confidence 9999999999999998777 77888888887777766555433 344457999999999888889999999999999
Q ss_pred EEecCC
Q 024011 236 IIGTQG 241 (274)
Q Consensus 236 ~~g~~~ 241 (274)
.++...
T Consensus 236 ~~g~~~ 241 (309)
T cd05289 236 SIAGPP 241 (309)
T ss_pred EEcCCC
Confidence 998654
No 118
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7e-30 Score=219.33 Aligned_cols=260 Identities=37% Similarity=0.579 Sum_probs=214.9
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 024011 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (274)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (274)
|++++...+....+++++.+.|.|.++||+||+.++++|++|.....+.++.....|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 57788777766668888888888899999999999999999999888765433345778999999999999999999999
Q ss_pred CCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHH
Q 024011 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (274)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~ 161 (274)
||+|+++..+|+|++|+.++.+.++++|+++++++++.++.+..++|+++.+...+++|++++|+|+++++|.+++++++
T Consensus 81 G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~ 160 (337)
T cd08275 81 GDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCK 160 (337)
T ss_pred CCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHH
Confidence 99999987678999999999999999999999999998999999999998888889999999999999999999999999
Q ss_pred Hc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecC
Q 024011 162 CQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 162 ~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
.. +..++.. .++++.+.+++++.+.+++....++.+.+...++ .++|+++|+.|+......+++++++|+++.+|..
T Consensus 161 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~ 238 (337)
T cd08275 161 TVPNVTVVGT-ASASKHEALKENGVTHVIDYRTQDYVEEVKKISP-EGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAA 238 (337)
T ss_pred HccCcEEEEe-CCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-CCceEEEECCcHHHHHHHHHhhccCcEEEEEeec
Confidence 98 3333222 2345777788889888888777777777777664 5799999999988788899999999999999865
Q ss_pred CCCc----------------cccchhhHhhcceEEEEee
Q 024011 241 GGAK----------------TELNITSLFAKRLTVQGIV 263 (274)
Q Consensus 241 ~~~~----------------~~~~~~~~~~~~~~i~g~~ 263 (274)
.... ..+....++.+++++.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (337)
T cd08275 239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFN 277 (337)
T ss_pred CCcCcccccccccccccccccccCHHHHhhcCceEEEee
Confidence 4210 1122234566777777765
No 119
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=4.6e-30 Score=217.06 Aligned_cols=219 Identities=36% Similarity=0.537 Sum_probs=197.8
Q ss_pred CCCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEe--cCCeeeeEEe
Q 024011 22 DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL--GGGGYAEKVA 99 (274)
Q Consensus 22 ~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~--~~g~~~~~~~ 99 (274)
.|++.+++|+||+.++++|+.|+....+.++....+|.++|+|++|+|+++|++++++++||+|+++. .+|+|++|+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~ 81 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT 81 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence 46688999999999999999999998887654445678899999999999999999999999999874 3489999999
Q ss_pred eeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH
Q 024011 100 VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179 (274)
Q Consensus 100 ~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~ 179 (274)
++.+.++++|+++++++++.++.+..++|+++ +...+++|++++|+++++++|++++++++..|++++++++++++.+.
T Consensus 82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 160 (303)
T cd08251 82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEY 160 (303)
T ss_pred ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999998 47889999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
++++|.+.+++....++.+.+.+.+.+.++|.++++.++......+++++++|+++.++...
T Consensus 161 ~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~ 222 (303)
T cd08251 161 LKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTA 222 (303)
T ss_pred HHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccC
Confidence 99999998888877778888888777778999999998877888899999999999987654
No 120
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.98 E-value=9.9e-31 Score=219.30 Aligned_cols=202 Identities=25% Similarity=0.370 Sum_probs=172.2
Q ss_pred CCCCceeEEEEEecCCCC------CCCCCCEEEEEe----------------------------------cCCeeeeEEe
Q 024011 60 YPGLECSGTILSVGKNVS------RWKVGDQVCALL----------------------------------GGGGYAEKVA 99 (274)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~----------------------------------~~g~~~~~~~ 99 (274)
++|||++|+|+++|++++ .+++||||+... .+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 579999999999999998 899999996521 2489999999
Q ss_pred eeCC-CeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhH
Q 024011 100 VPAG-QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKL 177 (274)
Q Consensus 100 ~~~~-~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~ 177 (274)
+|.. .++++|+++++++++.+.+...++|+++.+ ....+|++++|+|+ |++|++++|+++..|++ |++++++++++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 9997 699999999999999998899999998854 45568999999997 89999999999999996 88888899999
Q ss_pred HHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh-hHHHhhhccccCCEEEEEecCC-CCccccchhhHhhc
Q 024011 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAK 255 (274)
Q Consensus 178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~ 255 (274)
+.++++|++.+++.+. ..+.+.+.+.+.++|++||++|.. .++.++++++++|+++.+|... .....++...++.+
T Consensus 159 ~~a~~~Ga~~~i~~~~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~ 236 (280)
T TIGR03366 159 ELALSFGATALAEPEV--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRR 236 (280)
T ss_pred HHHHHcCCcEecCchh--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhC
Confidence 9999999988887543 234555666667899999999865 4788999999999999999754 23456778888999
Q ss_pred ceEEEEeecc
Q 024011 256 RLTVQGIVPL 265 (274)
Q Consensus 256 ~~~i~g~~~~ 265 (274)
++++.|+...
T Consensus 237 ~~~i~g~~~~ 246 (280)
T TIGR03366 237 WLTIRGVHNY 246 (280)
T ss_pred CcEEEecCCC
Confidence 9999998764
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=3e-29 Score=213.78 Aligned_cols=233 Identities=38% Similarity=0.593 Sum_probs=193.9
Q ss_pred EEcCCCCCcce--EEEeecCCCCCCCeEEEEEeeeecChhhhHhhcCCCCC--CCCCCCCCCCceeEEEEEecCCCCCCC
Q 024011 5 VITQPGSPEVL--QLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 5 ~~~~~~~~~~~--~~~~~~~~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
+++..+++..+ ++++.+.|+++++||+|++.++++|++|.+...|.++. ....|..+|||++|+|+++|+++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~ 81 (319)
T cd08267 2 VYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFK 81 (319)
T ss_pred eeCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCC
Confidence 34455555444 88899999999999999999999999999988775521 123456889999999999999999999
Q ss_pred CCCEEEEEec---CCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHH
Q 024011 81 VGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (274)
Q Consensus 81 ~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~ 157 (274)
+||+|++... .|+|++|+.++.+.++++|+++++++++.+.++..++|+++.+...+++|++++|+|++|++|++++
T Consensus 82 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~ 161 (319)
T cd08267 82 VGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAV 161 (319)
T ss_pred CCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHH
Confidence 9999998853 5899999999999999999999999999999999999999988777999999999999999999999
Q ss_pred HHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh--hHHHhhhccccCCEEE
Q 024011 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLF 235 (274)
Q Consensus 158 ~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v 235 (274)
++++..|++|++++++ ++.+.+++++.+.+++....++. .....++++|+++++.|+. .....+..++++|+++
T Consensus 162 ~la~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i 237 (319)
T cd08267 162 QIAKALGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYV 237 (319)
T ss_pred HHHHHcCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEE
Confidence 9999999999998865 77788888998888776654443 3344556799999999853 2333444599999999
Q ss_pred EEecCC
Q 024011 236 IIGTQG 241 (274)
Q Consensus 236 ~~g~~~ 241 (274)
.+|...
T Consensus 238 ~~g~~~ 243 (319)
T cd08267 238 SVGGGP 243 (319)
T ss_pred Eecccc
Confidence 998654
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=1.8e-28 Score=205.75 Aligned_cols=210 Identities=36% Similarity=0.582 Sum_probs=189.1
Q ss_pred CeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCCeEE
Q 024011 28 DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLP 107 (274)
Q Consensus 28 ~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ 107 (274)
+||+||+.++++|++|++...+.++ ..|.++|||++|+|+++|++++.+++||+|+++. .|+|++|+.++.+.+++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~ 76 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-PGAFATHVRVDARLVVK 76 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-cCcccceEEechhheEe
Confidence 5899999999999999998877652 3467899999999999999999999999999885 58999999999999999
Q ss_pred CCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC--C
Q 024011 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--A 185 (274)
Q Consensus 108 ~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g--~ 185 (274)
+|+++++.+++.++++..+++.++.+...+++|++++|+|+.|++|++++++++..|++++++++++++.+.+++.+ .
T Consensus 77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~ 156 (293)
T cd05195 77 IPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPV 156 (293)
T ss_pred CCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCc
Confidence 99999999999999999999999878788999999999998999999999999999999999999989988888887 6
Q ss_pred CEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+..++....++.+.+.+.+.++++|.++++.|+......+++++++|+++.++...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 212 (293)
T cd05195 157 DHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRD 212 (293)
T ss_pred ceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccc
Confidence 77777766677778888777778999999999888889999999999999998654
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=1.4e-27 Score=200.18 Aligned_cols=205 Identities=36% Similarity=0.600 Sum_probs=184.6
Q ss_pred EEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCC
Q 024011 32 IKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 32 V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~ 111 (274)
||+.++++|++|++...+.++ .|.++|||++|+|+++|++++.+++||+|+++. +|+|++|+.++.+.++++|++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~~p~~ 76 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-PGSFATYVRTDARLVVPIPDG 76 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-CCceeeEEEccHHHeEECCCC
Confidence 789999999999999877654 256899999999999999999999999999985 589999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC--CEEE
Q 024011 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVCI 189 (274)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~--~~~~ 189 (274)
+++++++.+..+..+++.++.+...+++|++++|+|+.+.+|+++.++++..|++|+++++++++.+.++++|. +..+
T Consensus 77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 156 (288)
T smart00829 77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIF 156 (288)
T ss_pred CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhhee
Confidence 99999999999999999998777889999999999989999999999999999999999999999999988987 6777
Q ss_pred eCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 190 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+....++.+.+.+...++++|.++|+.|+......++.++++|+++.+|...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 208 (288)
T smart00829 157 SSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRD 208 (288)
T ss_pred eCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcC
Confidence 7777777777877777778999999999777888899999999999998653
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=5.4e-25 Score=176.44 Aligned_cols=239 Identities=23% Similarity=0.339 Sum_probs=188.7
Q ss_pred CCCCCCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCC----ceeEEEEEecCCCCCCCCCCEEEEEecCCeeeeEE
Q 024011 23 PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL----ECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKV 98 (274)
Q Consensus 23 ~~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~----e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~ 98 (274)
.++++++|+||.++-+..|.....++...+..-..|+.||. .++|+|++ ++.+++++||.|+++. +|.+|.
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~---gWeeys 107 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV---GWEEYS 107 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec---cceEEE
Confidence 34699999999999999888655443322221112333332 66889998 5778899999999996 699999
Q ss_pred eeeCCC--eEECCC--CCCHHhh-ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 99 AVPAGQ--VLPVPS--GVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 99 ~~~~~~--~~~~p~--~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
+++... .++++. +.++.-. ..+.++.+|||..+.+...++.|++++|.||+|.+|+++-|+++.+||+|+.++-+
T Consensus 108 ii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS 187 (343)
T KOG1196|consen 108 VITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGS 187 (343)
T ss_pred EecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCC
Confidence 997653 444443 3333332 25789999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHH-HcCCCEEEeCCCC-cHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCCCCccc-----
Q 024011 174 EEKLAVCK-DLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE----- 246 (274)
Q Consensus 174 ~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~----- 246 (274)
.++.+.++ ++|.+..+|+.++ +..+.+.+ ..+.|+|+-|||+|+..++..+..|+.+||++.||....+...
T Consensus 188 ~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r-~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~ 266 (343)
T KOG1196|consen 188 KEKVDLLKTKFGFDDAFNYKEESDLSAALKR-CFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGL 266 (343)
T ss_pred hhhhhhhHhccCCccceeccCccCHHHHHHH-hCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccc
Confidence 99999887 5799999999887 55555554 5567899999999999999999999999999999988744332
Q ss_pred cchhhHhhcceEEEEeecccc
Q 024011 247 LNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 247 ~~~~~~~~~~~~i~g~~~~~~ 267 (274)
-++..++++++.+.|+...+.
T Consensus 267 ~~l~~ii~Kr~~iqgflv~d~ 287 (343)
T KOG1196|consen 267 HNLSTIIYKRIRIQGFLVSDY 287 (343)
T ss_pred cchhhheeeeEEeeeEEeech
Confidence 234667889999999876643
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.92 E-value=2.8e-23 Score=173.89 Aligned_cols=194 Identities=30% Similarity=0.440 Sum_probs=158.1
Q ss_pred CCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhc
Q 024011 56 GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135 (274)
Q Consensus 56 ~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~ 135 (274)
.+|.++|||++|+|+++|++++.+++||+|+++ +.|++|+.++.+.++++|+++++++++.+ ++.+++|+++. ..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~ 93 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR-DA 93 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hc
Confidence 468899999999999999999999999999987 36999999999999999999999998887 78999999874 68
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHHHcC-CCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
++++|++++|+|+ |.+|++++++++..|++ |+++++++++.+.++++| .+.+++... ..+.+.++|.+|
T Consensus 94 ~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~d~vl 164 (277)
T cd08255 94 EPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA--------DEIGGRGADVVI 164 (277)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch--------hhhcCCCCCEEE
Confidence 8999999999975 99999999999999998 999999999999888888 444433221 122445799999
Q ss_pred ECCCh-hhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeec
Q 024011 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVP 264 (274)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 264 (274)
++.+. ......+++++++|+++.+|..... .......+..+..++.+...
T Consensus 165 ~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd08255 165 EASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQV 215 (277)
T ss_pred EccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecc
Confidence 99875 4578889999999999999876544 22222334445556666543
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.91 E-value=6.8e-24 Score=194.29 Aligned_cols=244 Identities=26% Similarity=0.376 Sum_probs=206.2
Q ss_pred CCCcceEEEeecCC---CCCCCeEEEEEeeeecChhhhHhhcCCCCCCC------CCCCCCCCceeEEEEEecCCCCCCC
Q 024011 10 GSPEVLQLQEVEDP---QIKDDEVLIKVEATALNRADTLQRKGSYPPPK------GASPYPGLECSGTILSVGKNVSRWK 80 (274)
Q Consensus 10 ~~~~~~~~~~~~~~---~~~~~ev~V~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (274)
|+...++|.+.|.. +..++.-+.-|.|++||..|+....|+.+... ....++|.||+|+- .
T Consensus 1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------A 1493 (2376)
T ss_pred ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------C
Confidence 44455777777754 34778889999999999999999999876422 23567899999973 5
Q ss_pred CCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHH
Q 024011 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (274)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~ 160 (274)
-|.||.++.+--++++.+.++.+.+|.+|.++.+++|++.++.+.|+|++|..+++.++|+++||++++||+|++++.++
T Consensus 1494 ~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiA 1573 (2376)
T KOG1202|consen 1494 SGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIA 1573 (2376)
T ss_pred CCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHH
Confidence 59999999888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEE
Q 024011 161 KCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236 (274)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~ 236 (274)
..+|++|+.++-+.++.+++.+ +....+-|.++.+|..-+...+.++|+|+|+|....+.++..++||...|||..
T Consensus 1574 La~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLE 1653 (2376)
T KOG1202|consen 1574 LAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLE 1653 (2376)
T ss_pred HHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeee
Confidence 9999999999999999998874 455666678888999999999999999999999998999999999999999999
Q ss_pred EecCCCCccccc-hhhHhhcceEEEEeec
Q 024011 237 IGTQGGAKTELN-ITSLFAKRLTVQGIVP 264 (274)
Q Consensus 237 ~g~~~~~~~~~~-~~~~~~~~~~i~g~~~ 264 (274)
+|-..-.. .-+ -+..+.++.+.-|+..
T Consensus 1654 IGKfDLSq-NspLGMavfLkNvsfHGiLL 1681 (2376)
T KOG1202|consen 1654 IGKFDLSQ-NSPLGMAVFLKNVSFHGILL 1681 (2376)
T ss_pred ecceeccc-CCcchhhhhhcccceeeeeh
Confidence 98653111 112 2334556777777654
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.79 E-value=5.8e-19 Score=126.76 Aligned_cols=82 Identities=40% Similarity=0.618 Sum_probs=70.3
Q ss_pred CCeEEEEEeeeecChhhhHhhcCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEe-----------------
Q 024011 27 DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL----------------- 89 (274)
Q Consensus 27 ~~ev~V~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~----------------- 89 (274)
|+||+|||.++|||++|++.+.+........|.++|||++|+|+++|+++++|++||+|+...
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999996555557899999999999999999999999999998732
Q ss_pred ----------cCCeeeeEEeeeCCCeEEC
Q 024011 90 ----------GGGGYAEKVAVPAGQVLPV 108 (274)
Q Consensus 90 ----------~~g~~~~~~~~~~~~~~~~ 108 (274)
.+|+|+||+++|.+.++++
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 2599999999999998874
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.74 E-value=4.7e-17 Score=120.66 Aligned_cols=117 Identities=40% Similarity=0.733 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC-hhhHHHhhhccc
Q 024011 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLN 229 (274)
Q Consensus 151 ~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~ 229 (274)
++|++++|+|+..|++|+++++++++++.++++|++.+++.+..++.+++.+.+++.++|+||||+| ...++.++++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 80 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR 80 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence 6899999999999999999999999999999999999999999999999999998888999999999 567999999999
Q ss_pred cCCEEEEEecCCCCccccchhhHhhcceEEEEeecccc
Q 024011 230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPLIS 267 (274)
Q Consensus 230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 267 (274)
++|+++++|........++...++.+++++.|+....+
T Consensus 81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 118 (130)
T PF00107_consen 81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSP 118 (130)
T ss_dssp EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGH
T ss_pred cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCH
Confidence 99999999998867789999999999999999998753
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.31 E-value=5.5e-11 Score=105.91 Aligned_cols=129 Identities=18% Similarity=0.222 Sum_probs=98.1
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCC-------------cHHHHHHH
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTE-------------DFVARVKE 202 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~-------------~~~~~~~~ 202 (274)
..++++|+|+|+ |.+|+++++.++.+|++|+++++++++++.++++|++.+ ++..++ ++.+...+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 467999999997 999999999999999999999999999999999999854 444221 22222222
Q ss_pred HhCC--CCccEEEECCChh------h-HHHhhhccccCCEEEEEecCCCCc--cccchhhHhh-cceEEEEeeccc
Q 024011 203 ETGG--KGVDVILDCMGAS------Y-FQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFA-KRLTVQGIVPLI 266 (274)
Q Consensus 203 ~~~~--~~~d~vi~~~g~~------~-~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~-~~~~i~g~~~~~ 266 (274)
.+.+ +++|+||+++|.+ . .+..++.++++|++++++...+.. ...+...++. +++++.|.++..
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc
Confidence 2221 4699999999963 2 488999999999999999854332 3444455665 899999988653
No 130
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.25 E-value=3.2e-12 Score=101.43 Aligned_cols=78 Identities=27% Similarity=0.477 Sum_probs=59.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--C--EEEeCCCCcH----HHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D--VCINYKTEDF----VARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~--~~~~~~~~~~----~~~~~~~~~~~~~ 209 (274)
.++.++|+||++|+|.++++.+...|++|+++.|+.++++.+. +++. . ..+|..+.+. .+.+.+.++ .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g--~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG--RI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC--cc
Confidence 4589999999999999999999999999999999999998876 5662 2 2245544332 233333333 39
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+++||+|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999995
No 131
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.05 E-value=1.4e-09 Score=88.83 Aligned_cols=81 Identities=23% Similarity=0.377 Sum_probs=62.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC----CC-EE--EeCCCCcHHHHHHHHhCC--C
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG----AD-VC--INYKTEDFVARVKEETGG--K 207 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g----~~-~~--~~~~~~~~~~~~~~~~~~--~ 207 (274)
..+++++|+||++|||...++.+.+.|++++++.|++++++.+. ++. .. .+ .|..+.+..+.+.+.... .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 46789999999999999999999999999999999999987765 222 11 12 355555556666554333 3
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|||+|.
T Consensus 84 ~IdvLVNNAG~ 94 (265)
T COG0300 84 PIDVLVNNAGF 94 (265)
T ss_pred cccEEEECCCc
Confidence 68999999995
No 132
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.00 E-value=1.7e-08 Score=88.05 Aligned_cols=122 Identities=19% Similarity=0.200 Sum_probs=96.4
Q ss_pred HHHHHhhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 128 WSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 128 ~~~l~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
+.++.+..+ .-+|++|+|.|+ |.+|+.+++.++..|++|+++++++.+++.++.+|++.+. ..+ ..
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~------~~e----~v-- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMT------MEE----AV-- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEcc------HHH----HH--
Confidence 444434333 468999999997 9999999999999999999999999999999998875431 111 11
Q ss_pred CCccEEEECCChhh-HHHh-hhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 207 KGVDVILDCMGASY-FQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~~-~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.+.|+||+++|... +... ++.++++|+++.+|.. ...++...+..+++++.++..+
T Consensus 256 ~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~ 313 (413)
T cd00401 256 KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQ 313 (413)
T ss_pred cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCC
Confidence 24899999999754 5554 8999999999999954 3578888888899999988876
No 133
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.98 E-value=6.5e-10 Score=91.43 Aligned_cols=78 Identities=26% Similarity=0.386 Sum_probs=56.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E----EeCCCCcHH----HHHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C----INYKTEDFV----ARVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~----~~~~~~~~~----~~~~~~~~ 205 (274)
.|+.|+|+||++|||.+++..+.+.|++++.+.|+.++++.+ ++.+... + +|..+.+.. +++....+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 489999999999999999999999999999999888877655 3444332 2 244433322 23333333
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|||+|.
T Consensus 91 --~vDvLVNNAG~ 101 (282)
T KOG1205|consen 91 --RVDVLVNNAGI 101 (282)
T ss_pred --CCCEEEecCcc
Confidence 49999999995
No 134
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.80 E-value=3.4e-08 Score=76.25 Aligned_cols=78 Identities=27% Similarity=0.394 Sum_probs=62.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC---CEEEeCCCCc----HHHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---DVCINYKTED----FVARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~---~~~~~~~~~~----~~~~~~~~~~~~~~d~ 211 (274)
.|.++||+|+++|||++.++.+.+.|-+|+++.|++++++++++... ..+.|..+.+ +.+++.+..+. .++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~--lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPN--LNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCc--hhe
Confidence 47899999999999999999999999999999999999999986543 3345555544 45555554443 799
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
++||+|.
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9999995
No 135
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.71 E-value=3.9e-09 Score=86.32 Aligned_cols=78 Identities=22% Similarity=0.413 Sum_probs=57.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH----HHHHHcCC--CEEEeCCCCc----HHHHHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDLGA--DVCINYKTED----FVARVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~g~--~~~~~~~~~~----~~~~~~~~~~~~~ 208 (274)
.|+.|||+|+++|+|.++++-+.++|+++++++.+.+.. +.+++.|. ....|.++.+ ..+++++..+ .
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G--~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG--D 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC--C
Confidence 589999999999999999999999999999999876643 34444442 2334544432 3344455554 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+++||+|.
T Consensus 115 V~ILVNNAGI 124 (300)
T KOG1201|consen 115 VDILVNNAGI 124 (300)
T ss_pred ceEEEecccc
Confidence 9999999995
No 136
>PRK08324 short chain dehydrogenase; Validated
Probab=98.64 E-value=1.4e-07 Score=88.59 Aligned_cols=114 Identities=22% Similarity=0.258 Sum_probs=74.9
Q ss_pred eeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
++.+|..++...++.+ +.++.+++.....+ .....+|++++|+|++|++|.++++.+.+.|++|++++|
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r 454 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADL 454 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeC
Confidence 4667777777777776 66666666411000 122346899999999999999999999999999999999
Q ss_pred ChhhHHHHH-HcCC--C---EEEeCCCCcHHHHHHHHh--CCCCccEEEECCC
Q 024011 173 SEEKLAVCK-DLGA--D---VCINYKTEDFVARVKEET--GGKGVDVILDCMG 217 (274)
Q Consensus 173 ~~~~~~~~~-~~g~--~---~~~~~~~~~~~~~~~~~~--~~~~~d~vi~~~g 217 (274)
+.++++.+. +++. . ...|..+.+....+.+.. ...++|++|+|+|
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 988776554 3332 1 113444433222222211 1135999999998
No 137
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.64 E-value=1.8e-07 Score=78.35 Aligned_cols=80 Identities=26% Similarity=0.437 Sum_probs=58.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHh---CCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET---GGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~---~~~~~d~vi~ 214 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+.+.+...+ .|..+.+..+.+.+.. ....+|++|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 46799999999999999999999999999999999988887776554433 3544433333332221 1135899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 83 ~Ag~ 86 (277)
T PRK05993 83 NGAY 86 (277)
T ss_pred CCCc
Confidence 9873
No 138
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.60 E-value=1.2e-07 Score=73.69 Aligned_cols=80 Identities=21% Similarity=0.270 Sum_probs=58.8
Q ss_pred CCCEEEEecC-CchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC-EEEeCCCCcH----HHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGG-SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKTEDF----VARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga-~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~----~~~~~~~~~~~~~d~ 211 (274)
+.+.|||+|+ .||||.+++.-+.+.|+.|+++.|+-+..+.+. +.|.. .-+|...++. ..++++. ..+..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~-~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRAN-PDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhC-CCCceEE
Confidence 4577899876 789999999999999999999999999887665 66643 2245544332 3334433 3346999
Q ss_pred EEECCChh
Q 024011 212 ILDCMGAS 219 (274)
Q Consensus 212 vi~~~g~~ 219 (274)
++||+|..
T Consensus 85 L~NNAG~~ 92 (289)
T KOG1209|consen 85 LYNNAGQS 92 (289)
T ss_pred EEcCCCCC
Confidence 99999964
No 139
>PRK12742 oxidoreductase; Provisional
Probab=98.58 E-value=1.2e-06 Score=71.33 Aligned_cols=78 Identities=26% Similarity=0.361 Sum_probs=52.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH-HHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KDLGADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+++++|+|++|++|.++++.+.+.|++|+++.+ ++++.+.+ .+++...+ .|..+.+......+.. .++|++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 4789999999999999999999999999988765 44555444 34444332 2333322222222222 348999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 83 ag~ 85 (237)
T PRK12742 83 AGI 85 (237)
T ss_pred CCC
Confidence 984
No 140
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.55 E-value=1.1e-06 Score=73.32 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=52.8
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChhhH---HHH-HHcCCCEEE--eCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKL---AVC-KDLGADVCI--NYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~~~---~~~-~~~g~~~~~--~~~~~~~~~----~~~~~~~~ 206 (274)
.++++||+|+++ +||.++++.+.+.|++|+++.|+++.. +.+ ++.+....+ |..+.+..+ .+.+..+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG- 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC-
Confidence 578999999986 999999999999999999998875432 222 234433322 444333222 2233333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.+|++|||+|.
T Consensus 85 -~iD~lVnnAG~ 95 (271)
T PRK06505 85 -KLDFVVHAIGF 95 (271)
T ss_pred -CCCEEEECCcc
Confidence 59999999984
No 141
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.53 E-value=8e-07 Score=73.37 Aligned_cols=78 Identities=21% Similarity=0.258 Sum_probs=52.8
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC--EE--EeCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VC--INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~--~~--~~~~~~~~~~----~~~~~~~~~~ 208 (274)
.|++++|+|++ ++||.++++.+.+.|++|+++.|+++..+.++++... .. .|..+.+..+ .+.+..+ .
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG--K 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC--C
Confidence 57999999998 7999999999999999999999875433444443221 12 2443332222 2333333 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999999984
No 142
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.52 E-value=1.1e-05 Score=68.11 Aligned_cols=114 Identities=20% Similarity=0.247 Sum_probs=83.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.+++++|.|. |.+|..+++.++..|++|++++|+.++.+.++++|...+. .+.+.+... .+|+||+++..
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~-------~~~l~~~l~--~aDiVI~t~p~ 220 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFH-------LSELAEEVG--KIDIIFNTIPA 220 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeec-------HHHHHHHhC--CCCEEEECCCh
Confidence 5899999997 8999999999999999999999998888888888765331 112333333 48999999875
Q ss_pred hh-HHHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEEEeecc
Q 024011 219 SY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQGIVPL 265 (274)
Q Consensus 219 ~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 265 (274)
.. ....++.+++++.+++++...+. ..+ .....+++.+.+..+.
T Consensus 221 ~~i~~~~l~~~~~g~vIIDla~~pgg-td~--~~a~~~Gv~~~~~~~l 265 (296)
T PRK08306 221 LVLTKEVLSKMPPEALIIDLASKPGG-TDF--EYAEKRGIKALLAPGL 265 (296)
T ss_pred hhhhHHHHHcCCCCcEEEEEccCCCC-cCe--eehhhCCeEEEEECCC
Confidence 43 45667889999999999887654 333 2344556666654443
No 143
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.51 E-value=9.5e-07 Score=73.42 Aligned_cols=80 Identities=20% Similarity=0.278 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c----CCCE-E--EeCCCCcHHHHHHHHh-CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADV-C--INYKTEDFVARVKEET-GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~----g~~~-~--~~~~~~~~~~~~~~~~-~~~~~ 209 (274)
.|++++|+|+++++|.++++.+.+.|++|++++|+.++++.+.+ + +... . .|..+.+..+.+.+.. .-.++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 47899999999999999999999999999999999877654432 1 2221 2 3444433333332221 11358
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++++|+|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999984
No 144
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.50 E-value=1.8e-06 Score=77.13 Aligned_cols=127 Identities=22% Similarity=0.309 Sum_probs=89.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCC-------------CcHHHHHHHH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKT-------------EDFVARVKEE 203 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~-------------~~~~~~~~~~ 203 (274)
.++.+++|.|+ |.+|+++++.++.+|++|++.+++.++++.++++|.+.+ ++..+ +++.+...+.
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 35789999997 999999999999999999999999999999999988763 22211 1222222222
Q ss_pred hC--CCCccEEEECC---Ch--h--hHHHhhhccccCCEEEEEecCCCCccccchhh--Hh-hcceEEEEeecc
Q 024011 204 TG--GKGVDVILDCM---GA--S--YFQRNLGSLNIDGRLFIIGTQGGAKTELNITS--LF-AKRLTVQGIVPL 265 (274)
Q Consensus 204 ~~--~~~~d~vi~~~---g~--~--~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~--~~-~~~~~i~g~~~~ 265 (274)
+. ..++|++|+++ |. + .....++.|++++.+++++...+..+...... +. ..++.+.|..+.
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~nl 314 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTDL 314 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCCc
Confidence 22 24599999999 54 2 35777999999999999987765544433211 22 234777776654
No 145
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.48 E-value=9.4e-07 Score=72.86 Aligned_cols=82 Identities=22% Similarity=0.367 Sum_probs=63.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-----cCC---CEEEeCCCCc-HHHHHHHHhCCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGA---DVCINYKTED-FVARVKEETGGKG 208 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----~g~---~~~~~~~~~~-~~~~~~~~~~~~~ 208 (274)
+-|++++|+||+.|||.+-+.-+.++|.+|+++.|++++++..++ .+. ....|....+ ..+.+.+.+.+-.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 447999999999999999999888899999999999999977652 221 1234655444 3566777776666
Q ss_pred ccEEEECCChh
Q 024011 209 VDVILDCMGAS 219 (274)
Q Consensus 209 ~d~vi~~~g~~ 219 (274)
+-+++||+|..
T Consensus 127 VgILVNNvG~~ 137 (312)
T KOG1014|consen 127 VGILVNNVGMS 137 (312)
T ss_pred eEEEEeccccc
Confidence 78999999963
No 146
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.47 E-value=3.2e-06 Score=70.60 Aligned_cols=78 Identities=28% Similarity=0.386 Sum_probs=57.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHh--CCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET--GGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~~~g 217 (274)
+++||+|++|++|..+++.+.+.|++|++++|+.++.+.+.+.+...+ .|..+.+..+.+.+.. ...++|++|+++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 579999999999999999999999999999999888777665554433 4554433333333222 1135899999998
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 82 ~ 82 (274)
T PRK05693 82 Y 82 (274)
T ss_pred C
Confidence 3
No 147
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.45 E-value=2e-06 Score=71.36 Aligned_cols=78 Identities=21% Similarity=0.308 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHHH----HHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFVA----RVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~~----~~~~~~~~~~~d 210 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.++++.+. +++... . .|..+.+... .+.+..+ .+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFG--RVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence 4789999999999999999999999999999999987665543 444321 1 2443332222 2222222 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99999984
No 148
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.45 E-value=3.5e-06 Score=70.50 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=53.4
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChh---hHHHH-HHcCCCEE--EeCCCCcHHHHHHHHh-C-CCC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVC--INYKTEDFVARVKEET-G-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~-~~~g~~~~--~~~~~~~~~~~~~~~~-~-~~~ 208 (274)
.+++++|+|++ +|||.++++.+.+.|++|++++|+++ +++.+ ++++.... .|..+.+..+.+.+.. . -..
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 47899999996 79999999999999999999998753 33333 23443322 3444433333332221 1 134
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 84 iDilVnnAG~ 93 (274)
T PRK08415 84 IDFIVHSVAF 93 (274)
T ss_pred CCEEEECCcc
Confidence 8999999984
No 149
>PRK06182 short chain dehydrogenase; Validated
Probab=98.44 E-value=3.7e-06 Score=70.20 Aligned_cols=80 Identities=24% Similarity=0.310 Sum_probs=57.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHh--CCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET--GGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~~ 215 (274)
++++++|+|++|++|..+++.+.+.|++|++++|++++++.+.+.+...+ .|..+.+..+.+.+.. ...++|++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 46899999999999999999999999999999999988876655444332 3544433333332211 11359999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 82 ag~ 84 (273)
T PRK06182 82 AGY 84 (273)
T ss_pred CCc
Confidence 984
No 150
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.41 E-value=4.4e-06 Score=69.28 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=52.3
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChh---hHHHHH-HcCCCEE--EeCCCCcHHHHHHHHh-C-CCC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCK-DLGADVC--INYKTEDFVARVKEET-G-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~-~-~~~ 208 (274)
.|++++|+|+++ |+|.++++.+.+.|++|++..|+++ .++.+. +.+.... .|..+.+..+.+.+.. . -..
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999987 8999999999999999999887742 223332 2343332 3444433333333221 1 134
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999999974
No 151
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.41 E-value=3.9e-06 Score=69.48 Aligned_cols=78 Identities=21% Similarity=0.237 Sum_probs=52.0
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecChhh---HHHHH-HcCCCEEE--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEK---LAVCK-DLGADVCI--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~~---~~~~~-~~g~~~~~--~~~~~~~~----~~~~~~~~~ 206 (274)
.|++++|+|++ ++||.++++.+.+.|++|++++|+++. ++.+. +++....+ |..+.+.. +.+.+..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-- 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW-- 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc--
Confidence 47999999997 499999999999999999999987543 23332 33332222 33333222 2233333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
..+|++|+|+|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 248999999974
No 152
>PRK06398 aldose dehydrogenase; Validated
Probab=98.40 E-value=4.1e-07 Score=75.34 Aligned_cols=76 Identities=18% Similarity=0.230 Sum_probs=50.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHh-C-CCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET-G-GKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-~~~~d~vi~~~ 216 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|+++.... . .....|..+.+..+.+.+.. . -.++|++|+|+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~---~-~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A 80 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND---V-DYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc---e-EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 47899999999999999999999999999999987654320 0 01123444333222222211 1 12489999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 81 g~ 82 (258)
T PRK06398 81 GI 82 (258)
T ss_pred CC
Confidence 84
No 153
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.39 E-value=2.3e-06 Score=70.81 Aligned_cols=80 Identities=14% Similarity=0.230 Sum_probs=51.7
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCh---hhHHHHH-Hc-CCC-EE--EeCCCCcHHHHHHHHh-CC-
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCK-DL-GAD-VC--INYKTEDFVARVKEET-GG- 206 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~---~~~~~~~-~~-g~~-~~--~~~~~~~~~~~~~~~~-~~- 206 (274)
.|++++|+|++ +++|.++++.+.+.|++|+++.|+. ++++.+. ++ +.. .. .|..+.+..+.+.+.. ..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 47899999997 7999999999999999999987653 3344443 23 221 11 3444433333332221 11
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
..+|++|+|+|.
T Consensus 86 g~ld~lv~nag~ 97 (257)
T PRK08594 86 GVIHGVAHCIAF 97 (257)
T ss_pred CCccEEEECccc
Confidence 349999999873
No 154
>PRK06128 oxidoreductase; Provisional
Probab=98.36 E-value=4.8e-06 Score=70.57 Aligned_cols=78 Identities=24% Similarity=0.390 Sum_probs=51.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--H----HHHHHcCCCEE---EeCCCCcHHHH----HHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--L----AVCKDLGADVC---INYKTEDFVAR----VKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~----~~~~~~g~~~~---~~~~~~~~~~~----~~~~~~ 205 (274)
.++++||+|+++++|.++++.+.+.|++|+++.++.+. . +.+++.+.... .|..+.+..+. +.+..+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999999888765331 2 22333443322 23333322222 222232
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 134 --~iD~lV~nAg~ 144 (300)
T PRK06128 134 --GLDILVNIAGK 144 (300)
T ss_pred --CCCEEEECCcc
Confidence 49999999984
No 155
>PRK06484 short chain dehydrogenase; Validated
Probab=98.36 E-value=3.4e-06 Score=77.00 Aligned_cols=79 Identities=19% Similarity=0.260 Sum_probs=57.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCE---EEeCCCCcHHHHHH----HHhCCCCc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV---CINYKTEDFVARVK----EETGGKGV 209 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~~~~~~~----~~~~~~~~ 209 (274)
..|+++||+|+++++|.++++.+.+.|++|++++|++++++.+.+ ++... ..|..+.+..+.+. +.. ..+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARW--GRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHc--CCC
Confidence 357899999999999999999999999999999999888766653 44332 13444433222222 222 248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 345 d~li~nAg~ 353 (520)
T PRK06484 345 DVLVNNAGI 353 (520)
T ss_pred CEEEECCCC
Confidence 999999984
No 156
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.35 E-value=4.3e-06 Score=69.44 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=51.3
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecChh---hHHHHHH-cCCCEE--EeCCCCcHHHHHHHH-hCC-CC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVC--INYKTEDFVARVKEE-TGG-KG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~~~---~~~~~~~-~g~~~~--~~~~~~~~~~~~~~~-~~~-~~ 208 (274)
.|++++|+|+++ |+|.++++.+.+.|++|++..|++. ..+.+.. .+.... .|..+.+..+.+.+. ... ..
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 478999999975 8999999999999999999887732 2333322 222222 344443333333222 111 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999984
No 157
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.35 E-value=1.3e-05 Score=70.41 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=77.1
Q ss_pred HHHHHHHHhhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHH
Q 024011 125 CTVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 203 (274)
Q Consensus 125 ~~a~~~l~~~~~~~-~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 203 (274)
-..|.++.+..++. .|++++|.|. |.+|..+++.++..|++|+++++++.+...+...|... .+ . ++ .
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v-~~-----l-~e---a 264 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRV-MT-----M-EE---A 264 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEe-cC-----H-HH---H
Confidence 34455664443444 7999999996 99999999999999999999999888766665556542 21 1 11 2
Q ss_pred hCCCCccEEEECCChhh-HH-HhhhccccCCEEEEEecCC
Q 024011 204 TGGKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~~-~~-~~~~~l~~~g~~v~~g~~~ 241 (274)
. .+.|+||+++|... +. ..++.+++++.++.+|...
T Consensus 265 l--~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 265 A--ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred H--hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 2 24899999998754 44 5788899999999888765
No 158
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.32 E-value=5.7e-06 Score=68.53 Aligned_cols=78 Identities=17% Similarity=0.243 Sum_probs=50.4
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCh------hhHHHHHHcCC-CEE--EeCCCCcHH----HHHHHH
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVCKDLGA-DVC--INYKTEDFV----ARVKEE 203 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~------~~~~~~~~~g~-~~~--~~~~~~~~~----~~~~~~ 203 (274)
.|++++|+|++ +++|.++++.+.+.|++|+++.++. +.++.+.+.+. ... .|..+.+.. +.+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 47899999985 7999999999999999998876432 23333333222 122 344443322 233333
Q ss_pred hCCCCccEEEECCCh
Q 024011 204 TGGKGVDVILDCMGA 218 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~ 218 (274)
.+ ++|++|+|+|.
T Consensus 85 ~g--~iD~lv~nag~ 97 (258)
T PRK07370 85 WG--KLDILVHCLAF 97 (258)
T ss_pred cC--CCCEEEEcccc
Confidence 32 49999999984
No 159
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.31 E-value=1.1e-05 Score=65.83 Aligned_cols=103 Identities=18% Similarity=0.283 Sum_probs=68.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc---CCCEEE--eCCCCcHHHHHHHHhC--CCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCI--NYKTEDFVARVKEETG--GKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~~--~~~~~~~~~~~~~~~~--~~~~d 210 (274)
++++++|+|++|++|..+++.+.+.|++|++++|++++++.+. ++ +....+ |..+.+..+.+.+... -.++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999999999988776552 22 222222 3333222222222111 12489
Q ss_pred EEEECCChhh------------------------HHHhhhccccCCEEEEEecCC
Q 024011 211 VILDCMGASY------------------------FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 211 ~vi~~~g~~~------------------------~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+++++|... ....+..++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999987421 223344566778999988764
No 160
>PRK06484 short chain dehydrogenase; Validated
Probab=98.28 E-value=7e-06 Score=74.97 Aligned_cols=78 Identities=27% Similarity=0.342 Sum_probs=56.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE---EEeCCCCcHHHHHH----HHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---CINYKTEDFVARVK----EETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~~~~----~~~~~~~~d 210 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.++++.+. +++... ..|..+.+..+.+. +..+ ++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFG--RID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhC--CCC
Confidence 5789999999999999999999999999999999988776553 454332 23444433332322 2222 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999984
No 161
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.28 E-value=1.6e-05 Score=65.84 Aligned_cols=81 Identities=20% Similarity=0.282 Sum_probs=60.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC-C----CEEEeCCCCc----HHHHHHHHhCCC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-A----DVCINYKTED----FVARVKEETGGK 207 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g-~----~~~~~~~~~~----~~~~~~~~~~~~ 207 (274)
.-+++.|+|+|+.+|.|..++..+...|++|++...+++..+.++..- . ...+|...++ ..+.+.+..+..
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 346788999999999999999999999999999998877766654211 1 2235555443 334445566667
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
+.-.+|||+|
T Consensus 106 gLwglVNNAG 115 (322)
T KOG1610|consen 106 GLWGLVNNAG 115 (322)
T ss_pred cceeEEeccc
Confidence 7889999999
No 162
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.28 E-value=5.8e-06 Score=62.42 Aligned_cols=81 Identities=19% Similarity=0.143 Sum_probs=61.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE--eCCCCcHHHHHHHHhCC-CCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVKEETGG-KGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~-~~~d~vi~~ 215 (274)
.|..++++|+.-|||..+++-+...|++|+++.|+++.++.+-+..+..+. ..+-.+ .+.+.+.... ..+|.++|+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~-wea~~~~l~~v~pidgLVNN 84 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSA-WEALFKLLVPVFPIDGLVNN 84 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccH-HHHHHHhhcccCchhhhhcc
Confidence 588999999999999999999999999999999999998877665544332 222233 4455555544 347999999
Q ss_pred CChhh
Q 024011 216 MGASY 220 (274)
Q Consensus 216 ~g~~~ 220 (274)
+|...
T Consensus 85 AgvA~ 89 (245)
T KOG1207|consen 85 AGVAT 89 (245)
T ss_pred chhhh
Confidence 99654
No 163
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.27 E-value=2.1e-07 Score=71.40 Aligned_cols=78 Identities=27% Similarity=0.399 Sum_probs=55.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH-HHHcCC--CEE---EeCCCCcH----HHHHHHHhCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-CKDLGA--DVC---INYKTEDF----VARVKEETGGKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~~~~g~--~~~---~~~~~~~~----~~~~~~~~~~~~~ 209 (274)
.+.++|+|+++|||.++++.+.+.|+++.+.+++.+..+. ++.++. ++. .|....+. .++..+.++ .+
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g--~p 91 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG--TP 91 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC--CC
Confidence 4678999999999999999999999999999987775544 445654 322 23333222 333334444 48
Q ss_pred cEEEECCChh
Q 024011 210 DVILDCMGAS 219 (274)
Q Consensus 210 d~vi~~~g~~ 219 (274)
++++||+|..
T Consensus 92 svlVncAGIt 101 (256)
T KOG1200|consen 92 SVLVNCAGIT 101 (256)
T ss_pred cEEEEcCccc
Confidence 9999999963
No 164
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.26 E-value=5.7e-06 Score=70.77 Aligned_cols=80 Identities=24% Similarity=0.349 Sum_probs=57.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----H-cCCCE----EEeCCC--CcHHHHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGADV----CINYKT--EDFVARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~-~g~~~----~~~~~~--~~~~~~~~~~~~~~ 207 (274)
.|++++|+||++++|.++++.+.+.|++|++++|++++++.+. + .+... ..|..+ .+..+.+.+..++.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5899999999999999999999999999999999998876543 1 11111 234432 23344555555544
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|||+|.
T Consensus 132 didilVnnAG~ 142 (320)
T PLN02780 132 DVGVLINNVGV 142 (320)
T ss_pred CccEEEEecCc
Confidence 56799999984
No 165
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.26 E-value=6.1e-06 Score=70.86 Aligned_cols=80 Identities=29% Similarity=0.444 Sum_probs=57.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+ ++.+.+.. .|..+.+..+.+.+.. ...++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999999998877544 33454432 3444433333333221 11359
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999984
No 166
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.25 E-value=1.3e-05 Score=69.05 Aligned_cols=78 Identities=19% Similarity=0.294 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHHH----HhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKE----ETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~----~~~~~ 207 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+.+.+ ..+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g-- 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG-- 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC--
Confidence 4789999999999999999999999999999999988765443 3444332 34444333333322 232
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 48999999984
No 167
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.24 E-value=5.5e-06 Score=68.24 Aligned_cols=104 Identities=23% Similarity=0.349 Sum_probs=63.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH----HHcCCCE-E--EeCCCCc----HHHHHHHH---
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-C--INYKTED----FVARVKEE--- 203 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-~--~~~~~~~----~~~~~~~~--- 203 (274)
.+++++|+|+++++|.++++.+.+.|++|++.. +++++.+.+ ++.+... . .|..+.+ +.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 478999999999999999999999999998875 454544322 2223221 1 2332221 12222221
Q ss_pred -hCCCCccEEEECCChhh-----------H---------------HHhhhccccCCEEEEEecCCC
Q 024011 204 -TGGKGVDVILDCMGASY-----------F---------------QRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 204 -~~~~~~d~vi~~~g~~~-----------~---------------~~~~~~l~~~g~~v~~g~~~~ 242 (274)
.+..++|++|+|+|... + ..+++.+.+.|+++.++....
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 12236999999998410 1 123444556688888877653
No 168
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.23 E-value=4.4e-06 Score=69.45 Aligned_cols=81 Identities=31% Similarity=0.394 Sum_probs=57.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC------EEEeCCCCcHHHHHHHH-hC-
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD------VCINYKTEDFVARVKEE-TG- 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~------~~~~~~~~~~~~~~~~~-~~- 205 (274)
-.|++++|+|+++|||.+++..+.+.|++|+++.|++++++... ..+.. ...|....+..+.+.+. ..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999875554 22221 22344333323333221 11
Q ss_pred -CCCccEEEECCCh
Q 024011 206 -GKGVDVILDCMGA 218 (274)
Q Consensus 206 -~~~~d~vi~~~g~ 218 (274)
...+|+++||+|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 1349999999995
No 169
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.23 E-value=1.8e-05 Score=71.73 Aligned_cols=107 Identities=15% Similarity=0.205 Sum_probs=70.6
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH---------cCC-----CEEEeCCCCcHHH
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---------LGA-----DVCINYKTEDFVA 198 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---------~g~-----~~~~~~~~~~~~~ 198 (274)
...+.+.|++++|+||+|++|..+++.+.+.|++|++++|+.++++.+.+ .+. ..++..+..+ .+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-~e 151 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-PD 151 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC-HH
Confidence 34566789999999999999999999999999999999999887754422 121 1122222222 23
Q ss_pred HHHHHhCCCCccEEEECCChhh----------------HHHhhhccc--cCCEEEEEecCCC
Q 024011 199 RVKEETGGKGVDVILDCMGASY----------------FQRNLGSLN--IDGRLFIIGTQGG 242 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~----------------~~~~~~~l~--~~g~~v~~g~~~~ 242 (274)
.+.+..+ ++|+||+++|... ...+++.+. ..++||.++..+.
T Consensus 152 sI~~aLg--giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga 211 (576)
T PLN03209 152 QIGPALG--NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGT 211 (576)
T ss_pred HHHHHhc--CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchh
Confidence 3444443 4899999998521 112233332 2369999987653
No 170
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.23 E-value=3.4e-06 Score=71.32 Aligned_cols=78 Identities=24% Similarity=0.387 Sum_probs=56.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--CEE---EeCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DVC---INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~~~---~~~~~~~~~~----~~~~~~~~~~ 208 (274)
.|+++||+|+++++|.++++.+.+.|++|++++|++++++.+. +++. ... .|..+.+..+ .+.+..+ +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG--G 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC--C
Confidence 5789999999999999999999999999999999988776553 3432 111 3444432222 2222222 4
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 171
>PRK07985 oxidoreductase; Provisional
Probab=98.22 E-value=7.3e-06 Score=69.27 Aligned_cols=78 Identities=23% Similarity=0.290 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh--hhHHHH----HHcCCCE---EEeCCCCcHHHHH----HHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC----KDLGADV---CINYKTEDFVARV----KEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~--~~~~~~----~~~g~~~---~~~~~~~~~~~~~----~~~~~ 205 (274)
.+++++|+|+++++|.++++.+.+.|++|+++.++. +..+.+ ++.+... ..|..+.+....+ .+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 126 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL- 126 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 578999999999999999999999999999887543 233333 2333322 1244443322222 2222
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++++++|.
T Consensus 127 -g~id~lv~~Ag~ 138 (294)
T PRK07985 127 -GGLDIMALVAGK 138 (294)
T ss_pred -CCCCEEEECCCC
Confidence 358999999873
No 172
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.21 E-value=1.1e-05 Score=65.31 Aligned_cols=78 Identities=15% Similarity=0.192 Sum_probs=57.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++++|+|++|++|..+++.+.+.|++|++++|++++.+.+++++.... .|..+.+..+.+.+.....++|++|+++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 579999999999999999999999999999999887766655433222 243343334444444444469999999874
No 173
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.19 E-value=3.3e-05 Score=63.33 Aligned_cols=102 Identities=20% Similarity=0.311 Sum_probs=63.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHH----HHHcCCCE-E--EeCCCCcHHHHHHHH-hCC-CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAV----CKDLGADV-C--INYKTEDFVARVKEE-TGG-KG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~----~~~~g~~~-~--~~~~~~~~~~~~~~~-~~~-~~ 208 (274)
++++++|+|++|++|..+++.+.+.|++|+++.|+.+ ..+. ++..+... . .|..+.+....+.+. ... .+
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999888653 3322 22333322 1 243333222222221 111 25
Q ss_pred ccEEEECCChh--------------------hHHHhhhccccCCEEEEEecC
Q 024011 209 VDVILDCMGAS--------------------YFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 209 ~d~vi~~~g~~--------------------~~~~~~~~l~~~g~~v~~g~~ 240 (274)
+|++|+++|.. .++.+.+.+..+|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89999998742 112344445556788888663
No 174
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.18 E-value=2.1e-06 Score=67.65 Aligned_cols=77 Identities=25% Similarity=0.404 Sum_probs=53.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC---C-CEE-E---eCCC-Cc---HHHHHHHHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG---A-DVC-I---NYKT-ED---FVARVKEETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g---~-~~~-~---~~~~-~~---~~~~~~~~~~~~ 207 (274)
|++++++|+.||||+.....+...|+.+.++..+.|..+...++. + ..+ + |... .+ ..+.+....+
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg-- 82 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG-- 82 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC--
Confidence 899999999999999999999999999999888888766555432 2 111 1 2221 22 2223333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++||.+|-
T Consensus 83 ~iDIlINgAGi 93 (261)
T KOG4169|consen 83 TIDILINGAGI 93 (261)
T ss_pred ceEEEEccccc
Confidence 38999999995
No 175
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.17 E-value=1.6e-05 Score=65.93 Aligned_cols=78 Identities=29% Similarity=0.366 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc-CCCE-E--EeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADV-C--INYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~~-~--~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
++++++|+|+++++|.++++.+.+.|++|++++|++++++.+.+. +... . .|..+.+.. +++.+..+ .+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFG--KID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhC--CCC
Confidence 478999999999999999999999999999999998877766543 3221 1 233332222 22222232 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 82 ~li~~Ag~ 89 (262)
T TIGR03325 82 CLIPNAGI 89 (262)
T ss_pred EEEECCCC
Confidence 99999984
No 176
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.16 E-value=2.4e-05 Score=64.04 Aligned_cols=78 Identities=24% Similarity=0.368 Sum_probs=56.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-INYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+.+ .+...+ .|..+.+....+.+.. .++|++|+++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAA--GAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHh--CCCCEEEECC
Confidence 57899999999999999999999999999999999887765543 333222 2444333333333332 3589999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 84
No 177
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.16 E-value=5.2e-05 Score=59.17 Aligned_cols=93 Identities=19% Similarity=0.212 Sum_probs=66.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh----
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA---- 218 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~---- 218 (274)
|+|+||+|.+|..+++.+.+.|++|++..|++++.+. ..+.. ++..+..+. +.+.+... ++|.||++.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~-~~~~~al~--~~d~vi~~~~~~~~~ 74 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVE-IIQGDLFDP-DSVKAALK--GADAVIHAAGPPPKD 74 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEE-EEESCTTCH-HHHHHHHT--TSSEEEECCHSTTTH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccc-cceeeehhh-hhhhhhhh--hcchhhhhhhhhccc
Confidence 6899999999999999999999999999999998776 33333 333333333 44455554 59999999983
Q ss_pred -hhHHHhhhccccC--CEEEEEecCC
Q 024011 219 -SYFQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 219 -~~~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
......++.++.. .+++.++..+
T Consensus 75 ~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 75 VDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccceeeeccc
Confidence 2244555555443 3888887665
No 178
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.15 E-value=1.8e-05 Score=65.57 Aligned_cols=78 Identities=27% Similarity=0.347 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCC-EE--EeCCCCcHHHH----HHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VC--INYKTEDFVAR----VKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~-~~--~~~~~~~~~~~----~~~~~~~~~~d 210 (274)
++++++|+|+++++|..+++.+.+.|++|++++|++++++.+.+ ++.. .. .|..+.+..+. +.+.. ..+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAF--GKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhc--CCCC
Confidence 47899999999999999999999999999999999887766643 3321 12 23333222222 22222 2489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999984
No 179
>PRK06196 oxidoreductase; Provisional
Probab=98.15 E-value=1.3e-05 Score=68.35 Aligned_cols=80 Identities=20% Similarity=0.326 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE--EeCCCCcHHHHHHHHh-C-CCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC--INYKTEDFVARVKEET-G-GKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~-~-~~~~d~vi 213 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++.+.+. ++..-.. .|..+.+..+.+.+.. . ..++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 4789999999999999999999999999999999988765443 2221122 2444333333332221 1 13599999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99984
No 180
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.15 E-value=2.4e-05 Score=59.01 Aligned_cols=81 Identities=27% Similarity=0.410 Sum_probs=58.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHHHcCCCEEEeCCC----CcHHHHHHHHhCC-CCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKT----EDFVARVKEETGG-KGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~-~~~d~v 212 (274)
+|-..+|+|+.+++|.++++.+...|+.+++.+...++ .+.++++|...++...+ .+....+...... ...|..
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 46678999999999999999999999999999977775 46678899877764322 2222222222111 237999
Q ss_pred EECCChh
Q 024011 213 LDCMGAS 219 (274)
Q Consensus 213 i~~~g~~ 219 (274)
+||+|..
T Consensus 88 vncagia 94 (260)
T KOG1199|consen 88 VNCAGIA 94 (260)
T ss_pred eecccee
Confidence 9999964
No 181
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.12 E-value=3.8e-05 Score=62.83 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=50.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-H----HHHHHcCCCEE-E--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-L----AVCKDLGADVC-I--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~----~~~~~~g~~~~-~--~~~~~~~~----~~~~~~~~~ 206 (274)
++++++|+|++|++|..+++.+.+.|++++++.++.+. . +.+++.+.... + |..+.+.. +.+.+..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-- 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF-- 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc--
Confidence 57899999999999999999999999999887765432 2 22233333222 2 33332222 2222223
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 248999999984
No 182
>PLN02494 adenosylhomocysteinase
Probab=98.12 E-value=5.8e-05 Score=66.68 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=75.9
Q ss_pred HHHHHhhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 128 WSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 128 ~~~l~~~~~~-~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
+-++.+..++ -.|++++|.|. |.+|..+++.++..|++|+++++++.+...+...|.... ...+.+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv------~leEal------ 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL------TLEDVV------ 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec------cHHHHH------
Confidence 3344343333 56999999996 999999999999999999999988877666666666532 121222
Q ss_pred CCccEEEECCChhh--HHHhhhccccCCEEEEEecCC
Q 024011 207 KGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 207 ~~~d~vi~~~g~~~--~~~~~~~l~~~g~~v~~g~~~ 241 (274)
...|++|.+.|... ....++.|++++.++.+|...
T Consensus 308 ~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 308 SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 13799999999754 477899999999999998753
No 183
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.11 E-value=1.1e-05 Score=68.11 Aligned_cols=80 Identities=28% Similarity=0.397 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+. +.+... . .|..+.+..+.+.+.. .-.++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999999988765543 223322 2 2443433333333211 11258
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999984
No 184
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.10 E-value=5.3e-05 Score=62.12 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
++++++|+|++|++|..++..+.+.|++|++++|++++++... +.+... . .|..+.+..+.+.+.. . -.++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999887665432 223222 2 2443333222222211 1 1358
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 185
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.10 E-value=2.2e-05 Score=66.99 Aligned_cols=80 Identities=19% Similarity=0.281 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc-C-CC-EE--EeCCCCcHHHHHHHHh--CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-G-AD-VC--INYKTEDFVARVKEET--GGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~-g-~~-~~--~~~~~~~~~~~~~~~~--~~~ 207 (274)
.|++++|+|+++++|.++++.+.+.|++|++++|+.++.+.+. +. + .. .. +|..+.+....+.+.. ...
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999999987654432 21 1 11 11 3444432222222211 113
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 58999999984
No 186
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.09 E-value=3.3e-05 Score=63.49 Aligned_cols=74 Identities=15% Similarity=0.231 Sum_probs=50.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.. ..+.... +.... .|..+. +.+.+..+ ++|++|+|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~---~~~~~~~~--~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKE---ESLDKQLA--SLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCH---HHHHHhcC--CCCEEEEC
Confidence 3689999999999999999999999999999998763 2222111 11222 233322 23333443 49999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 985
No 187
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.09 E-value=3.3e-05 Score=62.33 Aligned_cols=78 Identities=27% Similarity=0.395 Sum_probs=57.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE-EEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++++|+|++|++|..+++.+.+.|++|++++|+.+..+.++..+... ..|..+.+..+.+.+.....++|++|+++|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 57999999999999999999999999999999988777776655432 2344444444444433444469999999875
No 188
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.08 E-value=4.5e-05 Score=64.58 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=34.2
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecChhhHHH
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~ 179 (274)
.|+++||+|+ ++|||.++++.+.+.|++|++ .|+..+++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~ 49 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNI 49 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhH
Confidence 5899999999 799999999999999999988 666555433
No 189
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.08 E-value=4e-05 Score=62.96 Aligned_cols=102 Identities=19% Similarity=0.233 Sum_probs=62.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhH----HHHHHcCCCE-E--EeCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGADV-C--INYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~----~~~~~~g~~~-~--~~~~~~~~~----~~~~~~~~~ 206 (274)
.++++||+|++|++|..+++.+.+.|+++++..++. ++. ..+++.+... . .|..+.+.. +.+.+..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 82 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-- 82 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc--
Confidence 368999999999999999999999999988776542 222 2223333322 2 233332222 2222223
Q ss_pred CCccEEEECCChhh--------------------------HHHhhhccccCCEEEEEecCCC
Q 024011 207 KGVDVILDCMGASY--------------------------FQRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 207 ~~~d~vi~~~g~~~--------------------------~~~~~~~l~~~g~~v~~g~~~~ 242 (274)
.++|.+|+++|... ...+.+.++..|+++.++...+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 25899999998410 1123344566788888877653
No 190
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.07 E-value=3.3e-05 Score=63.66 Aligned_cols=78 Identities=26% Similarity=0.340 Sum_probs=54.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+.++++.+. ..+... . .|..+.+..+ ++.+..+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-- 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG-- 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC--
Confidence 4789999999999999999999999999999999887765543 223221 1 3443332222 2223333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 49999999984
No 191
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.06 E-value=2.2e-05 Score=65.46 Aligned_cols=77 Identities=23% Similarity=0.334 Sum_probs=54.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE--EeCCCCcHHHH----HHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC--INYKTEDFVAR----VKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~----~~~~~~~~~~d~v 212 (274)
+++++|+|++|++|..+++.+...|++|++++|++++++.+. +++.... .|..+.+..+. +.+.. .++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADL--GPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHc--CCCCEE
Confidence 689999999999999999999999999999999988776553 3431222 24444332222 22222 358999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999984
No 192
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.06 E-value=0.00015 Score=60.83 Aligned_cols=109 Identities=18% Similarity=0.269 Sum_probs=76.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|++++|+|. |.+|.++++.++.+|++|++..|+.++.+.+.+.+...+ . .+.+.+... ..|+||++...
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~------~~~l~~~l~--~aDiVint~P~ 219 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-P------LNKLEEKVA--EIDIVINTIPA 219 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-c------HHHHHHHhc--cCCEEEECCCh
Confidence 4799999997 999999999999999999999999887777666664322 1 122333332 48999999875
Q ss_pred hhH-HHhhhccccCCEEEEEecCCCCccccchhhHhhcceEEE
Q 024011 219 SYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260 (274)
Q Consensus 219 ~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 260 (274)
..+ ...++.++++..++.++...+. .++...-.+++..+
T Consensus 220 ~ii~~~~l~~~k~~aliIDlas~Pg~---tdf~~Ak~~G~~a~ 259 (287)
T TIGR02853 220 LVLTADVLSKLPKHAVIIDLASKPGG---TDFEYAKKRGIKAL 259 (287)
T ss_pred HHhCHHHHhcCCCCeEEEEeCcCCCC---CCHHHHHHCCCEEE
Confidence 442 4466778888888888876543 23333334444444
No 193
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.06 E-value=9.9e-05 Score=64.53 Aligned_cols=102 Identities=17% Similarity=0.183 Sum_probs=75.0
Q ss_pred HHHHHHhhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhC
Q 024011 127 VWSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 127 a~~~l~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (274)
++.++.+..+ ...|++++|.|. |.+|..+++.++..|++|+++++++.+...+...|... .+ . ++. .
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v-~~-----l-eea---l- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRV-MT-----M-EEA---A- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEe-CC-----H-HHH---H-
Confidence 3444434333 367999999996 99999999999999999999998887766666666532 21 1 111 1
Q ss_pred CCCccEEEECCChhh-HH-HhhhccccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~~~-~~-~~~~~l~~~g~~v~~g~~~ 241 (274)
.+.|++|++.|... ++ ..+..+++++.++.+|...
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 23799999999755 44 4788999999999888753
No 194
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.05 E-value=2.8e-05 Score=65.06 Aligned_cols=80 Identities=26% Similarity=0.300 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-E-E--EeCCCCcHHHHHHHH-hC-CCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-V-C--INYKTEDFVARVKEE-TG-GKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~-~--~~~~~~~~~~~~~~~-~~-~~~~d~v 212 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|+.++++.+.+.... . . .|..+.+....+.+. .. -.++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 367899999999999999999999999999999998887666543222 1 1 244333322222221 11 1248999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999985
No 195
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.05 E-value=1.9e-05 Score=64.09 Aligned_cols=78 Identities=12% Similarity=0.153 Sum_probs=54.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~----~~~~~~~~~~ 207 (274)
.|++++|+|+++++|.+++..+.+.|++|+++.|++++++.+. +.+.... .|..+.+.. +.+.+..+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN-R 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC-C
Confidence 4789999999999999999999999999999999988765442 3343322 233332222 22222233 1
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
.+|++|+|+|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 5999999997
No 196
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.04 E-value=2e-05 Score=65.34 Aligned_cols=78 Identities=28% Similarity=0.391 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc-CC-CE---EEeCCCCcHHHHH----HHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-GA-DV---CINYKTEDFVARV----KEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~-g~-~~---~~~~~~~~~~~~~----~~~~~ 205 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+. +. +. .. ..|..+.+..+.+ .+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 85 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF- 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc-
Confidence 4789999999999999999999999999999999987765432 22 11 11 1244443323222 2222
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 86 -g~id~li~~Ag~ 97 (265)
T PRK07062 86 -GGVDMLVNNAGQ 97 (265)
T ss_pred -CCCCEEEECCCC
Confidence 348999999984
No 197
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.03 E-value=9.7e-05 Score=61.59 Aligned_cols=78 Identities=27% Similarity=0.426 Sum_probs=53.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE----EEeCCCCcHHHHHHHHh--CCCCcc
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV----CINYKTEDFVARVKEET--GGKGVD 210 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~----~~~~~~~~~~~~~~~~~--~~~~~d 210 (274)
++++|+|++|++|..+++.+.+.|++|++++|+++.++.+ +..+... ..|..+.+..+.+.+.. ...++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999988765443 2233321 24544433333332221 113489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999984
No 198
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.03 E-value=2.5e-05 Score=64.64 Aligned_cols=78 Identities=23% Similarity=0.287 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc-----CCCE-E--EeCCCCcHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GADV-C--INYKTEDFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~~~-~--~~~~~~~~~~----~~~~~~~ 205 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+. ++ +... . .|..+.+... .+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF- 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 4789999999999999999999999999999999887765443 21 2221 1 2333322222 222223
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 85 -g~id~li~~ag~ 96 (260)
T PRK07063 85 -GPLDVLVNNAGI 96 (260)
T ss_pred -CCCcEEEECCCc
Confidence 248999999984
No 199
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.02 E-value=5.2e-05 Score=62.54 Aligned_cols=80 Identities=23% Similarity=0.300 Sum_probs=55.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE-EeCCCCcHHHHHHHHh--CCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEET--GGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~ 214 (274)
.|++++|+|++|++|..+++.+.+.|++|++++|++.+.+... ++..... .|..+.+..+.+.+.. ...++|.+|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999999999999999999887765543 3433222 3444433333332221 1124899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9974
No 200
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.02 E-value=2.3e-05 Score=64.58 Aligned_cols=78 Identities=26% Similarity=0.414 Sum_probs=54.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~----~~~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++++++.+. +.+.... .|..+.+..+ .+.+..+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG-- 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC--
Confidence 4789999999999999999999999999999999988765543 2333222 2333332222 2222232
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 59999999984
No 201
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.02 E-value=7.5e-05 Score=61.87 Aligned_cols=83 Identities=31% Similarity=0.390 Sum_probs=56.9
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCE----E----EeCCCCcHHHHHHHHhC-
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV----C----INYKTEDFVARVKEETG- 205 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~----~----~~~~~~~~~~~~~~~~~- 205 (274)
+.++...++|+|+++++|++++..++..|++|.++.|+.+++..+++ +.... + .|..+.+..+.+.+.+.
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 34555889999999999999999999999999999999999877753 22111 1 12212122222222221
Q ss_pred -CCCccEEEECCCh
Q 024011 206 -GKGVDVILDCMGA 218 (274)
Q Consensus 206 -~~~~d~vi~~~g~ 218 (274)
...+|.+|+|+|.
T Consensus 109 ~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGV 122 (331)
T ss_pred ccCCcceEEEecCc
Confidence 1248999999996
No 202
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.01 E-value=0.00015 Score=63.22 Aligned_cols=120 Identities=13% Similarity=0.195 Sum_probs=79.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC-
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG- 217 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g- 217 (274)
+.+++|.|+ |.+|+.+++.++.+|++|++++++.++++.+.. ++......... .+.+.+... .+|+||++++
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~---~~~l~~~l~--~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSN---AYEIEDAVK--RADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCC---HHHHHHHHc--cCCEEEEcccc
Confidence 456889997 999999999999999999999999888777654 44432222221 223333333 4899999973
Q ss_pred --h--h--hHHHhhhccccCCEEEEEecCCCCccccchh------hHhhcceEEEEeecc
Q 024011 218 --A--S--YFQRNLGSLNIDGRLFIIGTQGGAKTELNIT------SLFAKRLTVQGIVPL 265 (274)
Q Consensus 218 --~--~--~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~------~~~~~~~~i~g~~~~ 265 (274)
. + .....++.+++++.+++++...+........ .+...++.+.+..+.
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nl 300 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANM 300 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCc
Confidence 2 1 1366778899999999998776544332211 223345666665443
No 203
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.01 E-value=4.1e-05 Score=63.46 Aligned_cols=82 Identities=23% Similarity=0.335 Sum_probs=55.1
Q ss_pred CCCCCEEEEecCCc-hHHHHHHHHHHHcCCeEEEEecChhhHHHHH----H-cCCCEE----EeCCCCcHHHHHHHHh-C
Q 024011 137 LSPGESFLVHGGSS-GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGADVC----INYKTEDFVARVKEET-G 205 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g-~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~-~g~~~~----~~~~~~~~~~~~~~~~-~ 205 (274)
+..+++++|+|++| ++|.++++.+.+.|++|+++++++++++... + ++...+ .|..+.+..+.+.+.. .
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 34579999999985 8999999999999999999998887665443 2 343222 2443333333333221 1
Q ss_pred -CCCccEEEECCCh
Q 024011 206 -GKGVDVILDCMGA 218 (274)
Q Consensus 206 -~~~~d~vi~~~g~ 218 (274)
...+|++|+|+|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 1258999999984
No 204
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.01 E-value=4.2e-05 Score=63.05 Aligned_cols=80 Identities=14% Similarity=0.202 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HHHHHHcCCCEE---EeCCCCcHHHHHHHHh-C-CCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADVC---INYKTEDFVARVKEET-G-GKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~~~d~ 211 (274)
.|++++|+|+++++|.++++.+.+.|++|+++++++.. .+.+++.+.... .|..+.+..+.+.+.. . -.++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999999999998876432 233344443322 3444433333332221 1 124999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999984
No 205
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.01 E-value=5e-05 Score=62.70 Aligned_cols=82 Identities=22% Similarity=0.280 Sum_probs=54.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhh-HHH----HHHcCC-C-EE--EeCCCCcHHHH-HHHHhC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEK-LAV----CKDLGA-D-VC--INYKTEDFVAR-VKEETG 205 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~-~~~----~~~~g~-~-~~--~~~~~~~~~~~-~~~~~~ 205 (274)
+..+++++|+|+++++|.++++.+.+.| ++|++++|++++ ++. +++.+. . .. .|..+.+..+. +.+...
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 4568899999999999999999888775 899999998775 433 333332 1 22 34333332222 222222
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
..++|++|+++|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 2369999998875
No 206
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.00 E-value=3.6e-05 Score=63.68 Aligned_cols=81 Identities=31% Similarity=0.356 Sum_probs=56.4
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCC--EE--EeCCCCcHHHH----HHHHhCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD--VC--INYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~--~~--~~~~~~~~~~~----~~~~~~~ 206 (274)
..-+++++||+|++|++|..+++.+.+.|++|++++|+.+..+.+.+ .... .. .|..+.+.... +.+..
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERF-- 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHh--
Confidence 33567999999999999999999999999999999998877665543 2222 22 24333332222 22222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|+||+++|.
T Consensus 85 ~~~d~vi~~ag~ 96 (264)
T PRK12829 85 GGLDVLVNNAGI 96 (264)
T ss_pred CCCCEEEECCCC
Confidence 259999999985
No 207
>PRK08017 oxidoreductase; Provisional
Probab=98.00 E-value=4.5e-05 Score=62.85 Aligned_cols=77 Identities=26% Similarity=0.290 Sum_probs=55.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHH----HHHHHhCCCCccEEEEC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVA----RVKEETGGKGVDVILDC 215 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~----~~~~~~~~~~~d~vi~~ 215 (274)
++++|+|++|++|..+++.+.+.|++|++++|+.++++.+++.+...+ .|..+.+... .+.+.. ...+|.++++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALT-DNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhc-CCCCeEEEEC
Confidence 579999999999999999999999999999999988887776665433 2443322222 222222 2358999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 874
No 208
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.99 E-value=5.3e-05 Score=62.13 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=52.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HHHHHHcCCCE-E--EeCCCCcHHHHHHH-HhC-CCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADV-C--INYKTEDFVARVKE-ETG-GKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~~-~--~~~~~~~~~~~~~~-~~~-~~~~d~ 211 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+... .+.+++.+... . .|..+.+....+.+ ... ..++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999999999999987531 23334444322 2 23333322222222 111 124899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999984
No 209
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.99 E-value=3e-05 Score=57.58 Aligned_cols=94 Identities=13% Similarity=0.183 Sum_probs=59.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHHHHH-HcCCC--EEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|.|+ |++|.+++..+...|++ ++++.|+.++.+.+. .++.. ...+.++ .. +... .+|+||+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~--~~----~~~~--~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED--LE----EALQ--EADIVIN 81 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG--HC----HHHH--TESEEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH--HH----HHHh--hCCeEEE
Confidence 5899999997 99999999999999995 999999999887665 44322 2233222 11 1221 3899999
Q ss_pred CCChhhH---HHhhhcccc-CCEEEEEecCC
Q 024011 215 CMGASYF---QRNLGSLNI-DGRLFIIGTQG 241 (274)
Q Consensus 215 ~~g~~~~---~~~~~~l~~-~g~~v~~g~~~ 241 (274)
+++.... ...+....+ ...+++++.+.
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr 112 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAVPR 112 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred ecCCCCcccCHHHHHHHHhhhhceeccccCC
Confidence 9886432 222222222 24777776543
No 210
>PRK06720 hypothetical protein; Provisional
Probab=97.99 E-value=9.8e-05 Score=57.01 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-EE--eCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~----~~~~~~~~ 207 (274)
.+++++|+|+++++|..++..+.+.|++|++++++.+..+.. .+.+... .. |..+.+.... +.+.. .
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~--G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF--S 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc--C
Confidence 578999999999999999999999999999999887765333 2334332 22 3322221122 22222 3
Q ss_pred CccEEEECCChh
Q 024011 208 GVDVILDCMGAS 219 (274)
Q Consensus 208 ~~d~vi~~~g~~ 219 (274)
++|++|+|+|..
T Consensus 93 ~iDilVnnAG~~ 104 (169)
T PRK06720 93 RIDMLFQNAGLY 104 (169)
T ss_pred CCCEEEECCCcC
Confidence 489999999953
No 211
>PRK08589 short chain dehydrogenase; Validated
Probab=97.99 E-value=3.5e-05 Score=64.28 Aligned_cols=77 Identities=25% Similarity=0.371 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH-H---HHcCCCE---EEeCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-C---KDLGADV---CINYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-~---~~~g~~~---~~~~~~~~~~~~----~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|++++|+ ++++. + ++.+... ..|..+.+..+. +.+..+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g-- 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG-- 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC--
Confidence 47899999999999999999999999999999998 44332 2 2233221 234444332222 222333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 48999999984
No 212
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.99 E-value=3.2e-05 Score=66.24 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC---CC-EE--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---AD-VC--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g---~~-~~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
++++++|+|++|+||..+++.+.+.|++|++++|+.++.+.+. ++. .. .. .|..+.+....+.+.. ...++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4789999999999999999999999999999999988765443 221 11 11 2443333222222221 12348
Q ss_pred cEEEECCC
Q 024011 210 DVILDCMG 217 (274)
Q Consensus 210 d~vi~~~g 217 (274)
|++|+|+|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999998
No 213
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.99 E-value=4.4e-05 Score=63.85 Aligned_cols=78 Identities=26% Similarity=0.322 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++++.++++.+. ..+.... .|..+.+....+ .+.. .
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL--G 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc--C
Confidence 4789999999999999999999999999999999887665432 2333221 233333222222 2222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+|+|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 48999999984
No 214
>PRK06194 hypothetical protein; Provisional
Probab=97.99 E-value=5.1e-05 Score=63.73 Aligned_cols=80 Identities=18% Similarity=0.346 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.++++||+|++|++|..+++.+.+.|++|++++++.+.++... ..+... .+ |..+.+..+.+.+.. ...++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999999999999876654432 223322 12 333322222222211 11248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999985
No 215
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.98 E-value=9.4e-05 Score=66.38 Aligned_cols=80 Identities=25% Similarity=0.399 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh--hhHHHH-HHcCCCEE-EeCCCCcHHHHHHHHhC--CCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC-KDLGADVC-INYKTEDFVARVKEETG--GKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~--~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~~--~~~~d~v 212 (274)
++++++|+|++|++|..+++.+.+.|++|++++++. +.++.+ .+++...+ .|..+.+..+.+.+... ..++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 578999999999999999999999999999998743 333333 34444322 45555443444433221 1258999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999984
No 216
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.97 E-value=6.4e-05 Score=62.34 Aligned_cols=78 Identities=15% Similarity=0.255 Sum_probs=51.1
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecChhh---HHHHH-HcCCCEE--EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEK---LAVCK-DLGADVC--INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~~~---~~~~~-~~g~~~~--~~~~~~~~~~----~~~~~~~~ 206 (274)
.+++++|+|+ +++||.++++.+.+.|++|+++.+++.. ++.+. +.+.... .|..+.+..+ .+.+..
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-- 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW-- 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh--
Confidence 5789999996 6799999999999999999998765432 23332 2233222 2443332222 333333
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 249999999985
No 217
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.97 E-value=4.6e-05 Score=63.20 Aligned_cols=80 Identities=16% Similarity=0.258 Sum_probs=54.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
+++++||+|++|++|.++++.+...|++|++++|+.++.+.+. ..+... . .|..+.+....+.+.. . -.++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999999887665443 223222 2 3444433333222211 1 1258
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999983
No 218
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.97 E-value=3.6e-05 Score=65.23 Aligned_cols=79 Identities=23% Similarity=0.334 Sum_probs=55.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-H----cCCCE----EEeCCCCc----HHHHHHHHh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D----LGADV----CINYKTED----FVARVKEET 204 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~----~g~~~----~~~~~~~~----~~~~~~~~~ 204 (274)
-.|.+++|+|+++|||..+++.+...|++|+...|+.++.+.++ + ..... .+|..+.. +.+.+.+.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~- 111 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK- 111 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc-
Confidence 35789999999999999999999999999999999987665543 2 12222 13433322 22333322
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
....|++|+|+|.
T Consensus 112 -~~~ldvLInNAGV 124 (314)
T KOG1208|consen 112 -EGPLDVLINNAGV 124 (314)
T ss_pred -CCCccEEEeCccc
Confidence 2458999999994
No 219
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.97 E-value=4.4e-05 Score=62.89 Aligned_cols=78 Identities=24% Similarity=0.344 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE--E--EeCCCCcHHHH----HHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--C--INYKTEDFVAR----VKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~~~~~----~~~~~~~~~~d 210 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.+..+...++.... . .|..+.+..+. +.+.. .++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAF--GRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCCC
Confidence 4789999999999999999999999999999999876544444332211 2 23333222222 22222 2489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999984
No 220
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.97 E-value=8.1e-05 Score=61.15 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHHHHHHH-hC-CCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARVKEE-TG-GKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~-~~-~~~~d~vi 213 (274)
+++++||+|++|++|..+++.+.+.|++|++++++. ....+.. .. .|..+.+..+.+.+. .. ...+|++|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 478999999999999999999999999999999876 1222221 11 233333222222221 11 12489999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+++|.
T Consensus 82 ~~ag~ 86 (252)
T PRK08220 82 NAAGI 86 (252)
T ss_pred ECCCc
Confidence 99985
No 221
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.96 E-value=4.6e-05 Score=62.96 Aligned_cols=79 Identities=20% Similarity=0.192 Sum_probs=53.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCC--C-EE--EeCCCCcHHHHHHH-HhC-CCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA--D-VC--INYKTEDFVARVKE-ETG-GKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~--~-~~--~~~~~~~~~~~~~~-~~~-~~~~d~ 211 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+.++++.+.+ +.. . .. .|..+.+....+.+ ... ...+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4789999999999999999999999999999999887765543 211 1 11 24333322222222 111 124899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999984
No 222
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.96 E-value=6.2e-05 Score=62.07 Aligned_cols=78 Identities=24% Similarity=0.299 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~----~~~~~~~ 207 (274)
++++++|+|+++++|.++++.+.+.|++|++++|+++..+.+.+ .+.. ...|..+.+..+.+ .+.. .
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF--G 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc--C
Confidence 57899999999999999999999999999999998876654432 2322 12344333322222 2222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+++|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 48999999974
No 223
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.95 E-value=7.8e-05 Score=63.36 Aligned_cols=36 Identities=31% Similarity=0.351 Sum_probs=33.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
.|++++|+|+++|+|.++++.+.+.|++|++++|+.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~ 42 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRST 42 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 479999999999999999999999999999999873
No 224
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.94 E-value=7.3e-05 Score=61.81 Aligned_cols=78 Identities=22% Similarity=0.432 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc-CCC-EE--EeCCCCcHHHHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-GAD-VC--INYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~-g~~-~~--~~~~~~~~~~~~~~~~~~~~~d 210 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|++++.+.+. +. +.. .. .|..+.+....+.+.. ..+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 4789999999999999999999999999999999987665433 21 222 12 2333333333333333 3499
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+|+|.
T Consensus 84 ~lv~~ag~ 91 (259)
T PRK06125 84 ILVNNAGA 91 (259)
T ss_pred EEEECCCC
Confidence 99999984
No 225
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.94 E-value=7.6e-05 Score=61.46 Aligned_cols=79 Identities=22% Similarity=0.363 Sum_probs=53.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCCcHHHHHHHHh-C-CCCcc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEET-G-GKGVD 210 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~~-~-~~~~d 210 (274)
|++++|+|+++++|.++++.+.+.|++|++++|+.++++.+. +.+... .+ |..+.+..+.+.+.. . -.++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 578999999999999999999999999999999887665443 222221 22 433333233322221 1 12489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999973
No 226
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.94 E-value=4.5e-05 Score=62.64 Aligned_cols=80 Identities=19% Similarity=0.291 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE---EEeCCCCcHHHHHHHHh-C-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV---CINYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~---~~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
++++++|+|++|++|..+++.+.+.|++|++++|+.++++.+ ++.+... ..|..+.+..+.+.+.. . -.++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999988765443 2334332 12333322222222221 1 1358
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|.+|+++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999983
No 227
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.94 E-value=8.9e-05 Score=61.12 Aligned_cols=75 Identities=17% Similarity=0.266 Sum_probs=52.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHhCCCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
++++||+|++|++|..+++.+.+.|++|++++|+.+..+.+. +.+... . .|..+. +.+.+... .++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~-~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA---IDRAQAAE-WDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH---HHHHHHhc-CCCCEE
Confidence 468999999999999999999999999999999877655443 223221 1 233332 22333332 369999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 78 i~~ag~ 83 (257)
T PRK09291 78 LNNAGI 83 (257)
T ss_pred EECCCc
Confidence 999983
No 228
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.93 E-value=4.7e-05 Score=62.78 Aligned_cols=80 Identities=23% Similarity=0.292 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.++++||+|++|++|..+++.+.+.|++|++++|++++.+.+. +.+... . .|..+.+..+.+.+.. .-..+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999999999999987654432 223222 1 2443333222222211 11348
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999984
No 229
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.93 E-value=7.2e-05 Score=60.91 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=53.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH-HHHHHcCCCEE-EeCCCCcHHHHHHH-HhCC-CCccEEEEC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVC-INYKTEDFVARVKE-ETGG-KGVDVILDC 215 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~~-~~~~~~~~~~~~~~-~~~~-~~~d~vi~~ 215 (274)
++++||+|+++++|.++++.+.+.|++|++++|+++.. +.+++.+...+ .|..+.+..+.+.+ .... .++|++|+|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 47899999999999999999999999999999886543 44444453221 24333222222222 1111 248999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 984
No 230
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.93 E-value=7.6e-05 Score=61.17 Aligned_cols=78 Identities=23% Similarity=0.339 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCCcHHHH----HHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDFVAR----VKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~----~~~~~~~~~~d 210 (274)
++++++|+|++|++|..+++.+.+.|++|++++|+++.++.+. +++.... .|..+.+.... +.+.. .++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF--GRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCCC
Confidence 4789999999999999999999999999999999877665543 4444322 23333222222 22222 2489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999984
No 231
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.93 E-value=8.7e-05 Score=61.22 Aligned_cols=81 Identities=20% Similarity=0.296 Sum_probs=54.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCC-EE--EeCCCCcHHHHHHHHh--CCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VC--INYKTEDFVARVKEET--GGKG 208 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~--~~~~~~~~~~~~~~~~--~~~~ 208 (274)
..+++++|+|++|++|..+++.+.+.|++|+++.|++++++.+.+ .+.. .. .|..+.+....+.+.. ....
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 357999999999999999999999999999999999887655432 1221 22 2333322222221111 1135
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 232
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.92 E-value=8.4e-05 Score=62.06 Aligned_cols=81 Identities=19% Similarity=0.209 Sum_probs=52.6
Q ss_pred CCCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEecCh---hhHHHHH-HcCCCEE--EeCCCCcHHHHHHHHh-C-CC
Q 024011 138 SPGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCK-DLGADVC--INYKTEDFVARVKEET-G-GK 207 (274)
Q Consensus 138 ~~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~---~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~-~-~~ 207 (274)
-.++++||+|++ ++||.++++.+.+.|++|+++.|++ ++++.+. +++.... .|..+.+..+.+.+.. . -.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 357899999996 7999999999999999999888764 3333332 3443222 3443333233332221 1 12
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+|+|.
T Consensus 88 ~iD~lv~nAG~ 98 (272)
T PRK08159 88 KLDFVVHAIGF 98 (272)
T ss_pred CCcEEEECCcc
Confidence 48999999984
No 233
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.92 E-value=5.8e-05 Score=61.93 Aligned_cols=80 Identities=25% Similarity=0.295 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC--CCE-E--EeCCCCcHHHHHHHHh--CCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG--ADV-C--INYKTEDFVARVKEET--GGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g--~~~-~--~~~~~~~~~~~~~~~~--~~~~~d 210 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+. .+. ... . .|..+.+....+.+.. ...++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999999999999999999999999999999988765543 222 111 1 2333322222222111 112489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
.||+++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999984
No 234
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.92 E-value=9.1e-05 Score=61.51 Aligned_cols=79 Identities=23% Similarity=0.252 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHH-hC-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEE-TG-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~-~~-~~~~ 209 (274)
++++++|+|++|++|..+++.+...|++|++++|++++++... +.+... . .|..+.+..+.+.+. .. -.++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5889999999999999999999999999999999887654332 223222 1 244333322222221 11 1358
Q ss_pred cEEEECCC
Q 024011 210 DVILDCMG 217 (274)
Q Consensus 210 d~vi~~~g 217 (274)
|++|+++|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99999987
No 235
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.91 E-value=8.7e-05 Score=60.05 Aligned_cols=75 Identities=17% Similarity=0.265 Sum_probs=53.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+++|+|+++++|.++++.+.+.|++|++++|++++++.+. +++...+ .|..+.+..+.+.+.... .+|++|+++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH-HLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh-cCcEEEECCC
Confidence 5899999999999999999999999999999988776553 3443322 344444333444333322 4899999976
No 236
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.91 E-value=9.8e-05 Score=64.91 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=52.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCC-EE--EeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VC--INYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|+|++|++|.++++.+.+.|++|++++|++++++... +.... .. .|..+ .+.+.+..+ ++|++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~~~v~~~l~--~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---EAALAELLE--KVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---HHHHHHHhC--CCCEEEE
Confidence 4789999999999999999999999999999998877654322 11111 12 23333 223444443 4999999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 252 nAGi 255 (406)
T PRK07424 252 NHGI 255 (406)
T ss_pred CCCc
Confidence 9884
No 237
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.00012 Score=60.66 Aligned_cols=79 Identities=23% Similarity=0.387 Sum_probs=52.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHh-C-CCCcc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVKEET-G-GKGVD 210 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~~~d 210 (274)
++++||+|++|++|..+++.+.+.|++|++++|++++.+.+ +..+.... .|..+.+..+.+.+.. . -.++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999987765433 23333221 2333332222222211 1 12489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
+||+|+|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999974
No 238
>PRK09186 flagellin modification protein A; Provisional
Probab=97.91 E-value=8.4e-05 Score=61.23 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc----CCC---E-EEeCCCCcHHHHHHHH-hC-CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD---V-CINYKTEDFVARVKEE-TG-GK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~---~-~~~~~~~~~~~~~~~~-~~-~~ 207 (274)
.+++++|+|++|++|..++..+.+.|++|+++.|++++++.+. ++ +.. . ..|..+.+....+.+. .. -.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999887765442 22 221 1 2344443322222221 11 12
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
++|++|+|++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 4899999986
No 239
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00021 Score=60.32 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=51.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHH----HHHcCCCE-E--EeCCCCcHHHHH----HHHhC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAV----CKDLGADV-C--INYKTEDFVARV----KEETG 205 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~----~~~~g~~~-~--~~~~~~~~~~~~----~~~~~ 205 (274)
-+++++||+|+++++|..+++.+.+.|++|+++.++.+. .+. ++..+... . .|..+.+..+.+ .+..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~- 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL- 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 347899999999999999999999999999999887532 222 22233322 1 233333222222 2222
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 123 -~~iD~lI~~Ag~ 134 (290)
T PRK06701 123 -GRLDILVNNAAF 134 (290)
T ss_pred -CCCCEEEECCcc
Confidence 248999999884
No 240
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.0001 Score=60.29 Aligned_cols=77 Identities=16% Similarity=0.103 Sum_probs=54.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-E--EEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-V--CINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++++|+|++|++|..+++.+...|++|++++|++++++.+.+.+.. . ..|..+.+..+.+.+.... ..|.+++++|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF-IPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc-CCCEEEEcCc
Confidence 5799999999999999999999999999999998887766543321 1 2344444433344333322 3688888886
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 81 ~ 81 (240)
T PRK06101 81 D 81 (240)
T ss_pred c
Confidence 3
No 241
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.90 E-value=6.1e-05 Score=62.29 Aligned_cols=78 Identities=23% Similarity=0.314 Sum_probs=54.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cC-CC-E--EEeCCCCcHHHHHHHHh-C--CCCccEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG-AD-V--CINYKTEDFVARVKEET-G--GKGVDVI 212 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g-~~-~--~~~~~~~~~~~~~~~~~-~--~~~~d~v 212 (274)
+++||+|++|++|..+++.+.+.|++|++++|+.+.++.+.+ +. .. . ..|..+.+....+.+.. . ..++|+|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 579999999999999999999999999999999888766643 22 11 1 23444433333322211 1 2358999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+|+|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999985
No 242
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.90 E-value=0.00011 Score=61.76 Aligned_cols=79 Identities=23% Similarity=0.260 Sum_probs=52.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh---------hhHHH----HHHcCCCEE---EeCCCCcH----H
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------EKLAV----CKDLGADVC---INYKTEDF----V 197 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~---------~~~~~----~~~~g~~~~---~~~~~~~~----~ 197 (274)
-.+++++|+|++++||.++++.+.+.|++|++++++. ++++. +++.+.... .|..+.+. .
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3589999999999999999999999999999988764 33322 223333222 23333222 2
Q ss_pred HHHHHHhCCCCccEEEECCCh
Q 024011 198 ARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.+.+.. ..+|++|+|+|.
T Consensus 84 ~~~~~~~--g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETF--GGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhc--CCCCEEEECCCC
Confidence 2223333 349999999984
No 243
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.89 E-value=8.4e-05 Score=61.60 Aligned_cols=80 Identities=21% Similarity=0.308 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c--CCC-EE--EeCCCCcHHHHHHHHh-CCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GAD-VC--INYKTEDFVARVKEET-GGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~--g~~-~~--~~~~~~~~~~~~~~~~-~~~~~d~ 211 (274)
++++++|+|++|++|..+++.+.+.|++|++++|++++++.+.+ + +.. .. .|..+.+..+.+.+.. ....+|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 46889999999999999999999999999999999887665542 2 211 12 2333332222222211 1235899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999985
No 244
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.89 E-value=8.4e-05 Score=61.38 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH---HcCCCE-E--EeCCCCcHHHHHHH-HhC-CCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADV-C--INYKTEDFVARVKE-ETG-GKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~g~~~-~--~~~~~~~~~~~~~~-~~~-~~~~d 210 (274)
.|+++||+|++|++|..+++.+.+.|+++++++|+++..+..+ +.+... . .|..+.+..+.+.+ ... -.++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999999999999999998887653333 233321 2 23333222222221 111 12589
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999983
No 245
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.89 E-value=0.00012 Score=60.52 Aligned_cols=77 Identities=22% Similarity=0.290 Sum_probs=51.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCCcHHHHHHH-HhC-CCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDFVARVKE-ETG-GKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~~~~~~-~~~-~~~~d~vi 213 (274)
+++|+|+++++|.++++.+.+.|++|++++|++++++.+. +.+....+ |..+.+..+.+.+ ... -.++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999999999999999999987764442 22322222 3333222222222 111 13589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99984
No 246
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.89 E-value=7.5e-05 Score=61.74 Aligned_cols=78 Identities=23% Similarity=0.334 Sum_probs=52.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH---HHHcCCCE---EEeCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV---CKDLGADV---CINYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~---~~~~g~~~---~~~~~~~~~~~----~~~~~~~~~~ 208 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|++...+. +...+.+. ..|..+.+... .+.+.. .+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF--GR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc--CC
Confidence 47899999999999999999999999999999987543222 22334332 13444322222 222222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 9999999973
No 247
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.89 E-value=0.00011 Score=60.82 Aligned_cols=78 Identities=22% Similarity=0.291 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~----~~~~~~~ 207 (274)
.++++||+|++|++|..+++.+.+.|++|++++|++++.+.+ ++.+.... .|..+.+..+.+ .+.. .
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF--G 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc--C
Confidence 478999999999999999999999999999999988655433 33443322 233333322222 2222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 48999999984
No 248
>PRK08643 acetoin reductase; Validated
Probab=97.89 E-value=3.6e-05 Score=63.48 Aligned_cols=77 Identities=21% Similarity=0.255 Sum_probs=53.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHH----HHHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVAR----VKEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~----~~~~~~~~~ 208 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+. +.+.... .|..+.+.... +.+.. .+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF--GD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc--CC
Confidence 578999999999999999999999999999999887654443 2232221 23333332222 22222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 8999999974
No 249
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00011 Score=60.63 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=52.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HH----HHHHcCCCE-E--EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADV-C--INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~----~~~~~g~~~-~--~~~~~~~~~~----~~~~~~~~ 206 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+++. ++ .++..+... . .|..+.+..+ .+.+..
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-- 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL-- 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc--
Confidence 47899999999999999999999999999999987542 22 223334322 1 2333332222 222222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
..+|++|+|+|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 348999999984
No 250
>PLN02253 xanthoxin dehydrogenase
Probab=97.87 E-value=7.1e-05 Score=62.67 Aligned_cols=78 Identities=22% Similarity=0.339 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--C-EE--EeCCCCcHHH----HHHHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VC--INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~~--~~~~~~~~~~----~~~~~~~~~~ 208 (274)
.+++++|+|+++++|.++++.+.+.|++|++++++++..+.+. ++.. . .. .|..+.+..+ .+.+.. .+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~--g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF--GT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh--CC
Confidence 4789999999999999999999999999999998876554433 2321 1 12 3444432222 222333 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 8999999974
No 251
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.87 E-value=5.5e-05 Score=62.11 Aligned_cols=80 Identities=21% Similarity=0.301 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c--CCC-EE--EeCCCCcHHHHHHHHh-C-CCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GAD-VC--INYKTEDFVARVKEET-G-GKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~--g~~-~~--~~~~~~~~~~~~~~~~-~-~~~~d 210 (274)
.+++++|+|++|++|..+++.+.+.|++|+++.|+.+..+...+ + +.. .. .|..+.+....+.+.. . -.++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999998876544332 2 222 12 2333333222222211 0 13589
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999984
No 252
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.87 E-value=4.2e-05 Score=62.96 Aligned_cols=78 Identities=22% Similarity=0.381 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~----~~~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.++++.+. +.+... .+ |..+.+..+ .+.+..+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG-- 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence 4689999999999999999999999999999999877654433 233221 22 333322222 2222233
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+++|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 48999999983
No 253
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.0001 Score=60.70 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCCcHH----HHHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFV----ARVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~----~~~~~~~~~~ 207 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|++++++.+ ++.+... . .|..+.+.. +.+.+..+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-- 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG-- 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC--
Confidence 478999999999999999999999999999999998765433 2333322 1 233332222 22233332
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 48999999984
No 254
>PRK05717 oxidoreductase; Validated
Probab=97.87 E-value=0.00019 Score=59.16 Aligned_cols=78 Identities=24% Similarity=0.285 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHcCCCE-E--EeCCCCcHH----HHHHHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADV-C--INYKTEDFV----ARVKEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-~--~~~~~~~~~----~~~~~~~~~~~~d 210 (274)
.|++++|+|++|++|..+++.+.+.|++|++++++.++.+.+ ++++... . .|..+.+.. +.+.+..+ .+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFG--RLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhC--CCC
Confidence 478999999999999999999999999999999887665443 3344321 1 233332222 22222222 489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99999984
No 255
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.86 E-value=4.1e-05 Score=63.71 Aligned_cols=78 Identities=26% Similarity=0.356 Sum_probs=52.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHh--CCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEET--GGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~--~~~~~d~vi~~ 215 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+... +.. ...|..+.+..+.+.+.. .-..+|++|+|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP--GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC--CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 3578999999999999999999999999999999876553221 222 123444433222222211 11248999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 984
No 256
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.85 E-value=6.2e-05 Score=63.96 Aligned_cols=80 Identities=19% Similarity=0.300 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHc--CCCE-E--EeCCCCcHHHHHHHHh-C-CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDL--GADV-C--INYKTEDFVARVKEET-G-GK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~--g~~~-~--~~~~~~~~~~~~~~~~-~-~~ 207 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+ .+. +... . .|..+.+..+.+.+.. . -.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 578999999999999999999999999999999987765432 211 1111 2 2333333222222221 1 13
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 95 ~iD~li~nAg~ 105 (306)
T PRK06197 95 RIDLLINNAGV 105 (306)
T ss_pred CCCEEEECCcc
Confidence 48999999984
No 257
>PRK08264 short chain dehydrogenase; Validated
Probab=97.85 E-value=7.4e-05 Score=60.89 Aligned_cols=75 Identities=25% Similarity=0.416 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|+|++|++|..+++.+.+.|+ +|++++|+.++.+. .+.. .. .|..+.+....+.+.. ..+|+||+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence 468999999999999999999999999 99999998876553 2222 12 2333333333333333 24899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
++|.
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 9986
No 258
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.84 E-value=0.00059 Score=56.25 Aligned_cols=143 Identities=17% Similarity=0.278 Sum_probs=90.1
Q ss_pred CCCCCCCEEEEEecCCeeeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHH
Q 024011 77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156 (274)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~ 156 (274)
..+++|++++... +|.++.. +...++.+++++++..+. .+.... ....+.. ...+++++|-.|++ .|..+
T Consensus 65 ~p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~--~~~~~~~VLDiGcG--sG~l~ 134 (250)
T PRK00517 65 HPIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEK--LVLPGKTVLDVGCG--SGILA 134 (250)
T ss_pred CCEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHh--hcCCCCEEEEeCCc--HHHHH
Confidence 3467898887764 4666644 677889999888766543 211111 1222222 25678999999973 37666
Q ss_pred HHHHHHcCC-eEEEEecChhhHHHHHHc----CCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh----HHHhhhc
Q 024011 157 IQMGKCQGV-RVFVTAGSEEKLAVCKDL----GADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY----FQRNLGS 227 (274)
Q Consensus 157 ~~~~~~~g~-~v~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~~~ 227 (274)
+.+ .+.|+ +|++++.++..++.+++. +....+.... +...+|+|+.+..... ++.+.+.
T Consensus 135 i~~-~~~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~-----------~~~~fD~Vvani~~~~~~~l~~~~~~~ 202 (250)
T PRK00517 135 IAA-AKLGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ-----------GDLKADVIVANILANPLLELAPDLARL 202 (250)
T ss_pred HHH-HHcCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc-----------CCCCcCEEEEcCcHHHHHHHHHHHHHh
Confidence 654 44566 599999999888766532 2211111000 0114899998776532 4667788
Q ss_pred cccCCEEEEEecCC
Q 024011 228 LNIDGRLFIIGTQG 241 (274)
Q Consensus 228 l~~~g~~v~~g~~~ 241 (274)
|+++|++++.+...
T Consensus 203 LkpgG~lilsgi~~ 216 (250)
T PRK00517 203 LKPGGRLILSGILE 216 (250)
T ss_pred cCCCcEEEEEECcH
Confidence 99999999987654
No 259
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.84 E-value=0.00011 Score=60.83 Aligned_cols=78 Identities=29% Similarity=0.413 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++||+|++|++|..+++.+.+.|++|++++|+.++++.+. ..+... . .|..+.+..+ .+.+.. .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~--~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF--G 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh--C
Confidence 4789999999999999999999999999999999887765443 222221 2 2444333332 222222 3
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|.+|+++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 48999999984
No 260
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00011 Score=59.75 Aligned_cols=78 Identities=18% Similarity=0.274 Sum_probs=52.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH----HHHcCCCEE-EeCCCCcHHHHHH----HHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGADVC-INYKTEDFVARVK----EETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~g~~~~-~~~~~~~~~~~~~----~~~~~~~~ 209 (274)
+++++||+|++|++|..+++.+.+.|++|++++|+.++... ++..+...+ .|..+....+.+. +.. .++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQF--GRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHh--CCc
Confidence 47899999999999999999999999999999997765432 222332222 3333322222222 222 258
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||+++|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999999874
No 261
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.84 E-value=0.00014 Score=59.94 Aligned_cols=80 Identities=19% Similarity=0.290 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
.++++||+|+++++|.++++.+.+.|++|++++|++++++.+. ..+... . .|..+.+..+.+.+.. . -.++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999999999999877654432 223222 2 2333333222222211 1 1248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999984
No 262
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.84 E-value=0.00014 Score=60.03 Aligned_cols=78 Identities=19% Similarity=0.252 Sum_probs=51.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh--hHHHHHHcCCCEE---EeCCCCcHH----HHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVC---INYKTEDFV----ARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~~~~---~~~~~~~~~----~~~~~~~~~~~~ 209 (274)
.|++++|+|+++++|.++++.+.+.|++|+.++++.. ..+.+++.+.... .|..+.+.. +.+.+..+ ++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG--HI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--CC
Confidence 4789999999999999999999999999998876532 2234444443221 233332222 22333332 48
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999984
No 263
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.84 E-value=0.00011 Score=56.31 Aligned_cols=78 Identities=24% Similarity=0.314 Sum_probs=50.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-eEEEEecC--hhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHhC--CCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS--EEKLAVC----KDLGADVC---INYKTEDFVARVKEETG--GKG 208 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~--~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~~--~~~ 208 (274)
|+++|+|+++++|..+++.+.+.|. +|+++.|+ .++.+.+ +..+.... .|..+.+..+.+.+... ...
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5799999999999999999999966 77888888 4444333 33443222 23333322222222111 134
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999985
No 264
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.84 E-value=0.00014 Score=60.00 Aligned_cols=80 Identities=19% Similarity=0.378 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFVARVKEET-G-GKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~d~v 212 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+. +++... . .|..+.+..+.+.+.. . -..+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3689999999999999999999999999999999988776554 333221 1 2333332222222211 1 1248999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 999874
No 265
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00014 Score=59.68 Aligned_cols=78 Identities=18% Similarity=0.257 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC-EE--EeCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VC--INYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~~~~----~~~~~~~~ 207 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+++..+.+. +.+.. .. .|..+....+. +.+..+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG-- 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC--
Confidence 4689999999999999999999999999999999876554332 22222 12 23333222222 222222
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+||+++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 48999999984
No 266
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00013 Score=59.85 Aligned_cols=79 Identities=23% Similarity=0.286 Sum_probs=52.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----c--CCC-EE--EeCCCCcHHHHHHHHh-C-CCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GAD-VC--INYKTEDFVARVKEET-G-GKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~--g~~-~~--~~~~~~~~~~~~~~~~-~-~~~ 208 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+.+ . +.. .. .|..+.+..+.+.+.. . -.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999999887655432 1 211 12 2433332222222211 1 135
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 8999999973
No 267
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.82 E-value=9.8e-05 Score=61.07 Aligned_cols=80 Identities=20% Similarity=0.293 Sum_probs=52.1
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecCh--hhHHHHH-HcCCC---EEEeCCCCcHHHHHHHH-hC-CCC
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVCK-DLGAD---VCINYKTEDFVARVKEE-TG-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~~--~~~~~~~-~~g~~---~~~~~~~~~~~~~~~~~-~~-~~~ 208 (274)
.+++++|+|+ ++++|.++++.+.+.|++|++++|+. +.++.+. +++.. ...|..+.+..+.+.+. .. -.+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 79999999999999999999998753 3344433 33321 12344333322333221 11 135
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999999984
No 268
>PRK09242 tropinone reductase; Provisional
Probab=97.82 E-value=7.8e-05 Score=61.55 Aligned_cols=78 Identities=21% Similarity=0.337 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----Hc--CCCE-E--EeCCCCcHHH----HHHHHhC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL--GADV-C--INYKTEDFVA----RVKEETG 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~--g~~~-~--~~~~~~~~~~----~~~~~~~ 205 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|+.+.++.+. .. +... . .|..+.+..+ .+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW- 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999887765443 12 2221 1 2333322222 222323
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 87 -g~id~li~~ag~ 98 (257)
T PRK09242 87 -DGLHILVNNAGG 98 (257)
T ss_pred -CCCCEEEECCCC
Confidence 348999999984
No 269
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.81 E-value=0.00011 Score=60.67 Aligned_cols=78 Identities=24% Similarity=0.425 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
++++++|+|+++++|..+++.+.+.|++|++++|+++.++.+ ++.+... . .|..+.+... .+.... .
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH--G 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc--C
Confidence 589999999999999999999999999999999988765443 2333221 2 2433332222 222222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|.+|+++|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 48999999984
No 270
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.81 E-value=0.00015 Score=60.57 Aligned_cols=77 Identities=16% Similarity=0.279 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~----~~~~~~~ 207 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.+..+.+. +.+... . .|..+.+....+ .+.. .
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF--G 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc--C
Confidence 4789999999999999999999999999999999877654432 223221 1 233333222222 2222 2
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
++|++|+|+|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 4899999998
No 271
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.80 E-value=0.00019 Score=61.07 Aligned_cols=108 Identities=19% Similarity=0.315 Sum_probs=73.8
Q ss_pred CCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCC---CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhH-
Q 024011 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL---SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL- 177 (274)
Q Consensus 103 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~---~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~- 177 (274)
+.++++|+.+..+.++.. .+.+.++.++...... -++++++|.|+ |.+|..+++.++..|. +|++++|+.++.
T Consensus 139 ~~a~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 356777888887777644 4556666666433221 36899999997 9999999999998775 788999998876
Q ss_pred HHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhH
Q 024011 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 221 (274)
Q Consensus 178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 221 (274)
+.+++++... .+. +.+.+... ..|+||.+++.+..
T Consensus 217 ~la~~~g~~~-~~~------~~~~~~l~--~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGNA-VPL------DELLELLN--EADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCeE-EeH------HHHHHHHh--cCCEEEECCCCCch
Confidence 4556777632 221 11222222 38999999997543
No 272
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.79 E-value=9.6e-05 Score=60.85 Aligned_cols=74 Identities=26% Similarity=0.335 Sum_probs=50.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHHHH----HHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARV----KEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~----~~~~~~~~~d~ 211 (274)
.+++++|+|+++++|.++++.+.+.|++|++++|+.++ ...+.. .. .|..+.+..+.+ .+.. ..+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERH--GRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHc--CCCCE
Confidence 47999999999999999999999999999999988754 111211 12 233332222222 2222 24899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999984
No 273
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.79 E-value=0.00012 Score=62.45 Aligned_cols=79 Identities=19% Similarity=0.304 Sum_probs=53.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHH-HcC---CC-EE--EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---AD-VC--INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~-~~g---~~-~~--~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
+++++|+|+++++|.++++.+.+.| ++|++++|++++.+.+. ++. .. .. .|..+.+..+.+.+.. . ..++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 6799999999999999999999999 99999999888765443 332 11 11 3444333233232221 1 1359
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999984
No 274
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00012 Score=60.55 Aligned_cols=80 Identities=21% Similarity=0.293 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecChhhHH----HHHHcCCCE---EEeCCCCcHHHHHHHHhC--CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLA----VCKDLGADV---CINYKTEDFVARVKEETG--GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~~~~~----~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~ 208 (274)
.+++++|+|++|++|..+++.+.+.|++ |++++|+.+..+ .+++.+... ..|..+.+....+.+... -.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999998 999998876554 233344332 124443332222222210 124
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 275
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00025 Score=57.88 Aligned_cols=81 Identities=22% Similarity=0.230 Sum_probs=54.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHH-hC-CCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEE-TG-GKG 208 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~-~~-~~~ 208 (274)
..+++++|+|++|++|..+++.+.+.|++|++++|++++.+.+. +.+... . .|..+.+....+.+. .. -.+
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999999999999999999887665443 223222 2 233332222222221 11 124
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 276
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.0002 Score=58.40 Aligned_cols=79 Identities=25% Similarity=0.456 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC-C---EEEeCCC---Cc---HHHHHHHHh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-D---VCINYKT---ED---FVARVKEET 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~-~---~~~~~~~---~~---~~~~~~~~~ 204 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|++++.+.+. +.+. . ...|..+ .+ +.+.+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999988765442 2221 1 1123221 11 222333333
Q ss_pred CCCCccEEEECCCh
Q 024011 205 GGKGVDVILDCMGA 218 (274)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (274)
. ..+|.+|+++|.
T Consensus 85 ~-~~id~vi~~ag~ 97 (239)
T PRK08703 85 Q-GKLDGIVHCAGY 97 (239)
T ss_pred C-CCCCEEEEeccc
Confidence 1 258999999984
No 277
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.78 E-value=0.00013 Score=59.89 Aligned_cols=78 Identities=23% Similarity=0.378 Sum_probs=53.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCE-E--EeCCCCcHHHHHHHHh-C-CCCccEEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-C--INYKTEDFVARVKEET-G-GKGVDVILD 214 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~d~vi~ 214 (274)
++++|+|++|++|.++++.+.+.|++|++++|++++++.+.+ ++... . .|..+.+..+.+.+.. . ..++|++|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 368999999999999999999999999999999887766543 33322 1 2333332222222211 1 135999999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
++|.
T Consensus 81 ~ag~ 84 (248)
T PRK10538 81 NAGL 84 (248)
T ss_pred CCCc
Confidence 9874
No 278
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.0002 Score=59.83 Aligned_cols=78 Identities=22% Similarity=0.267 Sum_probs=53.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc-CCCE---EEeCCCCcHHHHH-HHHh-CCCCccEEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADV---CINYKTEDFVARV-KEET-GGKGVDVILD 214 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~~---~~~~~~~~~~~~~-~~~~-~~~~~d~vi~ 214 (274)
+++||+|++|++|..+++.+.+.|++|+++.|++++++.+++. +... ..|..+.+....+ .+.. ...++|+||+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6799999999999999999999999999999998877766542 2221 1233333222222 2111 1135899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9984
No 279
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.78 E-value=0.00017 Score=59.54 Aligned_cols=77 Identities=18% Similarity=0.316 Sum_probs=51.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCCcHHH----HHHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++||+|+++++|.++++.+.+.|++|+++.++ ++.+.+ .+.+... . .|..+.+..+ .+.+.. .
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF--G 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc--C
Confidence 57999999999999999999999999999999887 333222 2333322 1 2433332222 222222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 91 ~id~li~~ag~ 101 (258)
T PRK06935 91 KIDILVNNAGT 101 (258)
T ss_pred CCCEEEECCCC
Confidence 48999999984
No 280
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00019 Score=59.40 Aligned_cols=78 Identities=21% Similarity=0.303 Sum_probs=52.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH---HcCCCE-E--EeCCCCcHHHHH----HHHhCCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADV-C--INYKTEDFVARV----KEETGGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~g~~~-~--~~~~~~~~~~~~----~~~~~~~~ 208 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|+++..+..+ +.+... . .|..+.+..+.+ .+.. ..
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE--GR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc--CC
Confidence 4789999999999999999999999999999998875333222 223222 1 233332222222 2222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 281
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00021 Score=59.62 Aligned_cols=77 Identities=21% Similarity=0.281 Sum_probs=53.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc-CCC-EE--EeCCCCcHHHH----HHHHhCCCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GAD-VC--INYKTEDFVAR----VKEETGGKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~-~~--~~~~~~~~~~~----~~~~~~~~~~d~ 211 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+.+.++.+.+. +.. .. .|..+.+..+. +.+.. .++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF--GRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc--CCCCE
Confidence 57899999999999999999999999999999998877665432 222 12 23333222222 22222 25899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999984
No 282
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.76 E-value=0.00016 Score=59.56 Aligned_cols=80 Identities=25% Similarity=0.296 Sum_probs=52.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHHHHHcCCCEE-EeCCCCcHHHHHHHHh-C-CCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCKDLGADVC-INYKTEDFVARVKEET-G-GKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~-~-~~~~d~vi~ 214 (274)
.+++++|+|+++++|.++++.+.+.|++|+++.++. +..+.+++.+...+ .|..+.+..+.+.+.. . -.++|++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999999999999999999999999998876543 34444544332222 3444433222222211 1 124899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
|+|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9974
No 283
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.76 E-value=0.00032 Score=57.88 Aligned_cols=77 Identities=26% Similarity=0.270 Sum_probs=52.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----H-cCC--CEEE--eCCCCcHHHH----HHHHhCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGA--DVCI--NYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~-~g~--~~~~--~~~~~~~~~~----~~~~~~~ 206 (274)
++++||+|+++++|.++++.+.+.|++|++++|+.++.+.+. . .+. ...+ |..+.+.... +.+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-- 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-- 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc--
Confidence 578999999999999999999999999999999877654432 1 121 1122 3333222222 22222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 248999999973
No 284
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00015 Score=60.47 Aligned_cols=78 Identities=24% Similarity=0.425 Sum_probs=52.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-------HH----HHHHcCCCEE---EeCCCCcHHH----HH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-------LA----VCKDLGADVC---INYKTEDFVA----RV 200 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-------~~----~~~~~g~~~~---~~~~~~~~~~----~~ 200 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|+.+. ++ .+++.+.... .|..+.+... .+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999999999999987542 21 2223333222 3433332222 22
Q ss_pred HHHhCCCCccEEEECCCh
Q 024011 201 KEETGGKGVDVILDCMGA 218 (274)
Q Consensus 201 ~~~~~~~~~d~vi~~~g~ 218 (274)
.+..+ .+|++|+++|.
T Consensus 85 ~~~~g--~id~li~~ag~ 100 (273)
T PRK08278 85 VERFG--GIDICVNNASA 100 (273)
T ss_pred HHHhC--CCCEEEECCCC
Confidence 22222 49999999984
No 285
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.76 E-value=0.00062 Score=60.44 Aligned_cols=92 Identities=18% Similarity=0.191 Sum_probs=69.5
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.-.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+...|.... ++ +++ . ...|+|+.+.
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~------~l-eel---l--~~ADIVI~at 317 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV------TL-EDV---V--ETADIFVTAT 317 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec------cH-HHH---H--hcCCEEEECC
Confidence 346999999996 899999999999999999999887776544444554321 11 222 2 2389999999
Q ss_pred Chhh-H-HHhhhccccCCEEEEEecCC
Q 024011 217 GASY-F-QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 217 g~~~-~-~~~~~~l~~~g~~v~~g~~~ 241 (274)
|... + ...++.|++++.++.+|...
T Consensus 318 Gt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 318 GNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred CcccccCHHHHhccCCCcEEEEcCCCc
Confidence 8744 3 47889999999999998763
No 286
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.76 E-value=0.00022 Score=59.23 Aligned_cols=78 Identities=22% Similarity=0.293 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHH----HHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVK----EETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~----~~~~~~ 207 (274)
.+++++|+|+++++|..++..+...|++|+++.+++++++.+. +.+.... .|..+....+.+. +.. .
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV--G 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC--C
Confidence 5789999999999999999999999999999999887664432 3343322 3443333222222 222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+|+|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 48999999984
No 287
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00021 Score=59.47 Aligned_cols=78 Identities=19% Similarity=0.282 Sum_probs=52.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHh--CCCCccE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVKEET--GGKGVDV 211 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~--~~~~~d~ 211 (274)
++++|+|++|++|..+++.+.+.|++|++++|+.++++.+ +..+.+.. .|..+.+..+.+.+.. ...++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999999999999999999999999999988776543 23333322 2333322222222211 1135999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999984
No 288
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00014 Score=59.08 Aligned_cols=80 Identities=28% Similarity=0.399 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcC---CCEEE--eCCCCcHHHH-HHHHhC-CCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---ADVCI--NYKTEDFVAR-VKEETG-GKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g---~~~~~--~~~~~~~~~~-~~~~~~-~~~~d 210 (274)
.+++++|+|++|++|..+++.+...|++|++++|++++.+.+. ++. ....+ |..+.+.... +.+... ..++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999887665443 332 11222 3333222222 222111 12589
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999874
No 289
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.75 E-value=0.00019 Score=58.79 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=52.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHH----HHHcCCCE-EE--eCCCCcHHHHH----HHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGADV-CI--NYKTEDFVARV----KEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~g~~~-~~--~~~~~~~~~~~----~~~~~~~ 207 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+. +.+.+... .+ |..+.+..+.+ .+..+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG-- 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--
Confidence 46899999999999999999999999999999998665433 22333222 12 33332222222 22222
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|.||+++|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 48999999864
No 290
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.75 E-value=0.00022 Score=60.58 Aligned_cols=80 Identities=18% Similarity=0.269 Sum_probs=51.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhH----HHHHHcCCCEE-E--eCCCCcHHHHHHHH-hCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGADVC-I--NYKTEDFVARVKEE-TGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~----~~~~~~g~~~~-~--~~~~~~~~~~~~~~-~~~~~~ 209 (274)
.|++++|+|+++++|.++++.+.+.|++|++.+++. +.. +.++..+.... + |..+.+..+.+.+. ..-.++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999988653 222 22333343322 2 33332222222221 111359
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999999984
No 291
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.74 E-value=0.0004 Score=54.70 Aligned_cols=113 Identities=22% Similarity=0.193 Sum_probs=76.5
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEEEeCCC
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCINYKT 193 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~~~~~ 193 (274)
-++..+...|.. .+...+++|++||-+|+ |.|+.++-+++..+ +|+.+.+.++-.+.+ +.+|...+.....
T Consensus 53 qtis~P~~vA~m--~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g 127 (209)
T COG2518 53 QTISAPHMVARM--LQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHG 127 (209)
T ss_pred ceecCcHHHHHH--HHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC
Confidence 344455555543 36678999999999996 56999998888877 999999887754444 4577643322111
Q ss_pred CcHHHHHHHHhCCCCccEEEECCChhhH-HHhhhccccCCEEEEEec
Q 024011 194 EDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g~ 239 (274)
+.. .-+.....||.++-+++.+.. ...++.|+++|+++.--.
T Consensus 128 DG~----~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 128 DGS----KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred Ccc----cCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 111 112223569999988887654 667899999999987643
No 292
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.74 E-value=0.00026 Score=57.73 Aligned_cols=78 Identities=23% Similarity=0.357 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCCcHHHHHH----HHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVK----EETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~----~~~~~~ 207 (274)
+++++||+|++|++|..+++.+.+.|.+|+++.|++++.+.. ++.+.... .|..+.+....+. +.. .
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF--G 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh--C
Confidence 357899999999999999999999999999999988765433 23343322 2333322222222 222 2
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|.+|+++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 48999999875
No 293
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.74 E-value=5.4e-05 Score=69.86 Aligned_cols=78 Identities=22% Similarity=0.335 Sum_probs=57.8
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC---------------------hhhHHHHHHcCCCEEEeCCC-
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS---------------------EEKLAVCKDLGADVCINYKT- 193 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~---------------------~~~~~~~~~~g~~~~~~~~~- 193 (274)
..++|++|+|.|+ |.+|+++++.+++.|++|+++++. +.+++.++++|.+..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 3678999999997 999999999999999999998853 33556677889877665433
Q ss_pred CcH-HHHHHHHhCCCCccEEEECCChh
Q 024011 194 EDF-VARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 194 ~~~-~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
.+. .+.+. .++|.||.++|..
T Consensus 212 ~~~~~~~~~-----~~~D~Vi~AtG~~ 233 (564)
T PRK12771 212 EDITLEQLE-----GEFDAVFVAIGAQ 233 (564)
T ss_pred CcCCHHHHH-----hhCCEEEEeeCCC
Confidence 221 22221 2489999999964
No 294
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.73 E-value=0.00017 Score=67.86 Aligned_cols=114 Identities=20% Similarity=0.284 Sum_probs=71.2
Q ss_pred eeeEEeeeCCCeEECCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 94 ~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
...|..+++...+.+ +.++.+++-.-..+ ....-.++++||+|++|++|.++++.+.+.|++|++++++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 456677777777777 66666665321110 0112247999999999999999999999999999999998
Q ss_pred hhhHHHHH-H----cCCC--EE--EeCCCCcHHHHHHHHh--CCCCccEEEECCCh
Q 024011 174 EEKLAVCK-D----LGAD--VC--INYKTEDFVARVKEET--GGKGVDVILDCMGA 218 (274)
Q Consensus 174 ~~~~~~~~-~----~g~~--~~--~~~~~~~~~~~~~~~~--~~~~~d~vi~~~g~ 218 (274)
.+.++.+. + .+.. .. .|..+.+....+.+.. .-.++|++|+|+|.
T Consensus 448 ~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 448 LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 87665442 1 2221 11 2333332222222211 11359999999984
No 295
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.73 E-value=0.00075 Score=58.51 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=68.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHHcC---C-CEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG---A-DVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g---~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
+++||.|+ |++|+.+++.|.+.+ .+|++.+|+.++++.+.... . ...+|..+. +.+.+...+ +|+||++
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~---~al~~li~~--~d~VIn~ 75 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV---DALVALIKD--FDLVINA 75 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh---HHHHHHHhc--CCEEEEe
Confidence 57899998 999999999999998 79999999999988886553 1 223444443 233444433 6999999
Q ss_pred CChhhHHHhh-hccccCCEEEEEecCCCC
Q 024011 216 MGASYFQRNL-GSLNIDGRLFIIGTQGGA 243 (274)
Q Consensus 216 ~g~~~~~~~~-~~l~~~g~~v~~g~~~~~ 243 (274)
+....-..++ .+++.+-.++++......
T Consensus 76 ~p~~~~~~i~ka~i~~gv~yvDts~~~~~ 104 (389)
T COG1748 76 APPFVDLTILKACIKTGVDYVDTSYYEEP 104 (389)
T ss_pred CCchhhHHHHHHHHHhCCCEEEcccCCch
Confidence 9876544444 456666677777665533
No 296
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.72 E-value=8.9e-05 Score=61.28 Aligned_cols=73 Identities=32% Similarity=0.418 Sum_probs=50.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHH----HHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVA----RVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~----~~~~~~~~~~~d~ 211 (274)
.|++++|+|+++++|..+++.+.+.|++|++++|+++.. .... .. .|..+.+..+ .+.+.. .++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERL--GGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHc--CCCCE
Confidence 478999999999999999999999999999999886532 1111 11 2333333222 222332 34899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 81 vi~~ag~ 87 (260)
T PRK06523 81 LVHVLGG 87 (260)
T ss_pred EEECCcc
Confidence 9999983
No 297
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00022 Score=59.54 Aligned_cols=80 Identities=28% Similarity=0.414 Sum_probs=52.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-H---cC--CC-EEE--eCCCCcHHHHHHH-HhC-CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LG--AD-VCI--NYKTEDFVARVKE-ETG-GK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g--~~-~~~--~~~~~~~~~~~~~-~~~-~~ 207 (274)
++++++|+|++|++|..+++.+.+.|++|++++|+.++.+... + .+ .. ..+ |..+.+..+.+.+ ... ..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999877654332 2 21 11 122 3333322222222 111 12
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 48999999973
No 298
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.71 E-value=0.0003 Score=57.47 Aligned_cols=78 Identities=31% Similarity=0.442 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCCcHHHHH----HHHhCCCCcc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDFVARV----KEETGGKGVD 210 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~~~~~----~~~~~~~~~d 210 (274)
++++++|+|++|++|..+++.+.+.|++|++..++.++++.+. .++... . .|..+.+..+.+ .+.. .++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADL--EGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc--CCCC
Confidence 4789999999999999999999999999999888877766553 333222 2 233332222222 2222 3489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
.+|+|+|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999984
No 299
>PRK12743 oxidoreductase; Provisional
Probab=97.71 E-value=0.00028 Score=58.27 Aligned_cols=77 Identities=21% Similarity=0.283 Sum_probs=51.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHH----HHHcCCCEE---EeCCCCcH----HHHHHHHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAV----CKDLGADVC---INYKTEDF----VARVKEETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~----~~~~g~~~~---~~~~~~~~----~~~~~~~~~~~ 207 (274)
+++++|+|+++++|..+++.+.+.|++|+++.+ +.+..+. ++..+.... .|..+.+. .+++.+..+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG-- 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 578999999999999999999999999988865 3333332 233443322 24333322 223333333
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 48999999984
No 300
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.71 E-value=0.00028 Score=58.51 Aligned_cols=78 Identities=15% Similarity=0.317 Sum_probs=51.1
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCeEEEEecC---hhhHHHHH-HcCCCEE--EeCCCCcHHHHH----HHHhCC
Q 024011 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGS---EEKLAVCK-DLGADVC--INYKTEDFVARV----KEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga--~g~iG~~~~~~~~~~g~~v~~~~~~---~~~~~~~~-~~g~~~~--~~~~~~~~~~~~----~~~~~~ 206 (274)
.+++++|+|+ ++++|.++++.+.+.|++|+++.+. +++++.+. +++.... .|..+.+..+.+ .+..
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-- 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW-- 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh--
Confidence 4789999996 5799999999999999999987643 33443332 3443222 344433323322 2223
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 359999999984
No 301
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.70 E-value=0.00015 Score=59.78 Aligned_cols=80 Identities=23% Similarity=0.311 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+. +.+... . .|..+.+....+.+.. ...++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999999988765442 223322 1 2443333222222211 11258
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999974
No 302
>PRK05599 hypothetical protein; Provisional
Probab=97.69 E-value=0.0002 Score=58.79 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=51.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC--EE--EeCCCCcHHHH----HHHHhCCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD--VC--INYKTEDFVAR----VKEETGGKG 208 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~--~~--~~~~~~~~~~~----~~~~~~~~~ 208 (274)
++++|+|+++|+|.++++.+. .|++|++++|++++++.+. +.+.. .. .|..+.+..+. +.+.. .+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA--GE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc--CC
Confidence 468999999999999999887 4999999999988775542 33432 22 24444333332 23322 34
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 78 id~lv~nag~ 87 (246)
T PRK05599 78 ISLAVVAFGI 87 (246)
T ss_pred CCEEEEecCc
Confidence 8999999985
No 303
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00035 Score=57.60 Aligned_cols=79 Identities=25% Similarity=0.266 Sum_probs=52.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCC--CEE--EeCCCCcHHHH-HHHHhC-CCCccEE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DVC--INYKTEDFVAR-VKEETG-GKGVDVI 212 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~~~--~~~~~~~~~~~-~~~~~~-~~~~d~v 212 (274)
+++++|+|++|++|..++..+.+.|++|++++|+.++.+.+. ++.. -.. .|..+.+.... +.+... -.++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 578999999999999999999999999999999888765543 2221 112 23333222221 111111 1248999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999984
No 304
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00048 Score=57.58 Aligned_cols=77 Identities=22% Similarity=0.309 Sum_probs=51.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHhC-CCCccE
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEETG-GKGVDV 211 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~~-~~~~d~ 211 (274)
+++++|+|+ |++|.++++.+. .|++|++++|++++++.+. +.+... . .|..+.+..+.+.+... -.++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 468999998 799999999986 7999999999877654432 233222 1 34444333333333221 135899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 80 li~nAG~ 86 (275)
T PRK06940 80 LVHTAGV 86 (275)
T ss_pred EEECCCc
Confidence 9999984
No 305
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.68 E-value=0.00011 Score=60.84 Aligned_cols=79 Identities=18% Similarity=0.243 Sum_probs=50.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH----HH-cCCC-EE--EeCCCCcHHHHHHHHhC--CC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KD-LGAD-VC--INYKTEDFVARVKEETG--GK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~-~g~~-~~--~~~~~~~~~~~~~~~~~--~~ 207 (274)
++++++|+|+++++|.++++.+.+.|++|+++.+ ++++++.+ +. .+.. .. .|..+.+..+.+.+... -.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5799999999999999999999999999988865 44444332 11 2322 22 24433332222222211 12
Q ss_pred CccEEEECCC
Q 024011 208 GVDVILDCMG 217 (274)
Q Consensus 208 ~~d~vi~~~g 217 (274)
.+|++|+|+|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 4899999996
No 306
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.68 E-value=0.00046 Score=58.97 Aligned_cols=94 Identities=17% Similarity=0.222 Sum_probs=62.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEE-eCCCCcHHHHHHHHhCCCCccEEEECCChhh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (274)
+|+|+||+|-+|..+++.+...|++|.+.+|+.++...+...+...+. |..+. +.+.+... ++|+||++++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~---~~l~~al~--g~d~Vi~~~~~~~ 76 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLP---ETLPPSFK--GVTAIIDASTSRP 76 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCH---HHHHHHHC--CCCEEEECCCCCC
Confidence 699999999999999999999999999999987766555444543332 32322 23334343 4899999876311
Q ss_pred -------------HHHhhhccccCC--EEEEEecC
Q 024011 221 -------------FQRNLGSLNIDG--RLFIIGTQ 240 (274)
Q Consensus 221 -------------~~~~~~~l~~~g--~~v~~g~~ 240 (274)
....++.++..| +++.++..
T Consensus 77 ~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 77 SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 123344444433 88887764
No 307
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.67 E-value=0.00039 Score=56.67 Aligned_cols=80 Identities=24% Similarity=0.330 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCEE-E--eCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC-I--NYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~~-~--~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+++++|+|++|++|..+++.+.+.|++|++++|+.++.+.+ +..+.... + |..+.+....+.+.. .-.++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 368899999999999999999999999999999987765443 22232221 2 332322222222211 11358
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999874
No 308
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.66 E-value=0.00037 Score=57.42 Aligned_cols=78 Identities=18% Similarity=0.288 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHH----HHHHhCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVAR----VKEETGGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~----~~~~~~~~ 207 (274)
.+++++|+|+++++|..+++.+.+.|+++++++++.+..+.+. ..+... . .|..+.+.... +.+.. .
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~--~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL--G 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc--C
Confidence 4799999999999999999999999999999998877654432 233322 2 23333322222 22222 3
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|++|+++|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 48999999984
No 309
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.66 E-value=0.00038 Score=57.04 Aligned_cols=80 Identities=21% Similarity=0.246 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCCcHHHHHHHH-hC-CCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEE-TG-GKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~-~~-~~~~ 209 (274)
+++++||+|++|++|..+++.+.+.|++|++++|+.+..+.+. +.+... .+ |..+.+..+.+.+. .. -.++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999887655443 223222 22 33332222222221 11 1248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999983
No 310
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00031 Score=57.40 Aligned_cols=77 Identities=19% Similarity=0.231 Sum_probs=51.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC-C-EEE--eCCCCcHHHHHHHHhCCCCccEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-D-VCI--NYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~-~-~~~--~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
++++|+|++|++|..+++.+.+.|++|++++|++++.+... ..+. . ..+ |..+.+..+.+.+... ..+|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence 58999999999999999999999999999999987664432 1111 1 122 3333333333333222 237999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
++++|.
T Consensus 81 v~~ag~ 86 (243)
T PRK07102 81 LIAVGT 86 (243)
T ss_pred EECCcC
Confidence 999874
No 311
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.00059 Score=57.05 Aligned_cols=80 Identities=18% Similarity=0.188 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC--C-EE--EeCCCCcHHHHHHHHhC-CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--D-VC--INYKTEDFVARVKEETG-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~--~-~~--~~~~~~~~~~~~~~~~~-~~~ 208 (274)
.++++||+|++|++|..+++.+.+.|++|++++|+.+..+.+. ..+. . .. .|..+.+..+.+.+... -.+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3678999999999999999999999999999999887664443 2221 1 12 24333322222222211 134
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999874
No 312
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.0007 Score=53.57 Aligned_cols=64 Identities=23% Similarity=0.314 Sum_probs=47.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++|+|+++++|..+++.+.+. ++|++++|+.. ....|..+.+..+.+.+..+ ++|++|+++|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~--~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDPASIRALFEKVG--KVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCChHHHHHHHHhcC--CCCEEEECCCC
Confidence 6899999999999999998888 99999998753 22345554444444444332 59999999984
No 313
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.63 E-value=0.00029 Score=57.70 Aligned_cols=78 Identities=29% Similarity=0.333 Sum_probs=50.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhH----HHHHHcCCCEE---EeCCCCcHHH----HHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKL----AVCKDLGADVC---INYKTEDFVA----RVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~----~~~~~~g~~~~---~~~~~~~~~~----~~~~~~~~ 206 (274)
.+++++|+|+++++|..+++.+.+.|+++++..+ +..+. +.+++.+.... .|..+.+..+ ++.+..
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV-- 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh--
Confidence 4689999999999999999999999999888543 33322 22333444332 2333322222 222223
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 358999999984
No 314
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.61 E-value=0.00045 Score=56.63 Aligned_cols=78 Identities=24% Similarity=0.282 Sum_probs=51.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEE-EecChhhHHHH----HHcCCCEE---EeCCCCcHHHH----HHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFV-TAGSEEKLAVC----KDLGADVC---INYKTEDFVAR----VKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~-~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~----~~~~~~~ 206 (274)
++++++|+|++|++|..+++.+.+.|++|++ ..|+.++.+.+ ++.+.... .|..+.+.... +.+..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-- 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc--
Confidence 4689999999999999999999999999876 46666554332 33343222 23333322222 22222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 248999999984
No 315
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.61 E-value=0.00051 Score=56.79 Aligned_cols=118 Identities=25% Similarity=0.394 Sum_probs=78.9
Q ss_pred CCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCC
Q 024011 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA 185 (274)
Q Consensus 110 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~ 185 (274)
+++++++|. ..+...+.+..++++|+++|=+|+ |-|.++..++++.|++|+.++.|+++.+.++ +.|.
T Consensus 49 ~~~tL~eAQ------~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl 120 (283)
T COG2230 49 PDMTLEEAQ------RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGL 120 (283)
T ss_pred CCCChHHHH------HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCC
Confidence 344555553 455555668889999999999996 7899999999999999999999999887665 3454
Q ss_pred CEEEeCCCCcHHHHHHHHhCCCCccEEEE-----CCCh----hhHHHhhhccccCCEEEEEecCC
Q 024011 186 DVCINYKTEDFVARVKEETGGKGVDVILD-----CMGA----SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~-----~~g~----~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..-+...-.++ ++..+ .||-|+. ..|. ..+..+.+.|+++|++++-....
T Consensus 121 ~~~v~v~l~d~----rd~~e--~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 121 EDNVEVRLQDY----RDFEE--PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred CcccEEEeccc----ccccc--ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 31111111111 11121 2776643 3333 23677888999999999876554
No 316
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00031 Score=56.97 Aligned_cols=75 Identities=21% Similarity=0.228 Sum_probs=51.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHH-HHHHhCCCCccEEEECC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVAR-VKEETGGKGVDVILDCM 216 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-~~~~~~~~~~d~vi~~~ 216 (274)
.+++++|+|++|++|..+++.+.+.|++|+++.|+.+. ..... ...|..+.+..+. +.+.....++|++|+++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 36889999999999999999999999999999988664 11111 1234433332222 22222233589999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 77 g~ 78 (234)
T PRK07577 77 GI 78 (234)
T ss_pred CC
Confidence 84
No 317
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.60 E-value=6.3e-05 Score=62.44 Aligned_cols=75 Identities=23% Similarity=0.262 Sum_probs=51.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHH----HHHhCCCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARV----KEETGGKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~----~~~~~~~~~d~vi 213 (274)
.+++++|+|++|++|.++++.+.+.|++|+++++++++.+. .... ...|..+.+..+.+ .+..+ .+|++|
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFG--RIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEE
Confidence 47899999999999999999999999999999987765421 1111 11243333222222 22222 489999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 99984
No 318
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.58 E-value=0.0018 Score=51.24 Aligned_cols=77 Identities=25% Similarity=0.335 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c----CCCEE-EeCCCCcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADVC-INYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~----g~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.+++++|+|++|++|..+++.+...|++|+++.|+.++.+.+.+ + +.... .+..+ .+.+.+... +.|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~--~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD---DAARAAAIK--GADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC---HHHHHHHHh--cCCEE
Confidence 57899999999999999999999999999999999887765532 2 22211 12222 122233332 48999
Q ss_pred EECCChhh
Q 024011 213 LDCMGASY 220 (274)
Q Consensus 213 i~~~g~~~ 220 (274)
|++.....
T Consensus 102 i~at~~g~ 109 (194)
T cd01078 102 FAAGAAGV 109 (194)
T ss_pred EECCCCCc
Confidence 99876543
No 319
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.58 E-value=0.00085 Score=54.97 Aligned_cols=80 Identities=25% Similarity=0.368 Sum_probs=54.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCC--EE--EeCCC---CcH---HHHHHH
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGAD--VC--INYKT---EDF---VARVKE 202 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~--~~--~~~~~---~~~---~~~~~~ 202 (274)
..++++++|+|++|++|..+++.+.+.|++|++++|+.+..+.+ ++.+.. .+ .|.+. .+. .+.+.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999988765333 233322 12 23321 111 222333
Q ss_pred HhCCCCccEEEECCCh
Q 024011 203 ETGGKGVDVILDCMGA 218 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~ 218 (274)
.. ..+|+||+++|.
T Consensus 89 ~~--~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QF--GRLDGVLHNAGL 102 (247)
T ss_pred Hh--CCCCEEEECCcc
Confidence 22 248999999874
No 320
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.57 E-value=0.00027 Score=59.03 Aligned_cols=101 Identities=23% Similarity=0.305 Sum_probs=66.6
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCCCC
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (274)
..+++|++||..|+ |. |..+.++++..|. +|++++.+++.++.+++ .+...+. ....++ +.+ ......
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~-~~l--~~~~~~ 146 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEI-EAL--PVADNS 146 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcch-hhC--CCCCCc
Confidence 56789999999997 44 7777777776664 69999999998887764 3332221 111111 111 112346
Q ss_pred ccEEEECCC-----h--hhHHHhhhccccCCEEEEEecCC
Q 024011 209 VDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 209 ~d~vi~~~g-----~--~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+|+|+.+.. . ..+..+.+.|+++|++++.+...
T Consensus 147 fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~ 186 (272)
T PRK11873 147 VDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVL 186 (272)
T ss_pred eeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 999986542 1 34778899999999999876543
No 321
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.57 E-value=0.00067 Score=55.87 Aligned_cols=100 Identities=11% Similarity=0.130 Sum_probs=63.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC--CCEE-EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--ADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g--~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++++++|+|++|.+|..+++.+...|++|++..|+.++.......+ ...+ .|..+. .+.+.+... .++|+||.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~l~~~~~-~~~d~vi~~ 92 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--SDKLVEAIG-DDSDAVICA 92 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--HHHHHHHhh-cCCCEEEEC
Confidence 3689999999999999999999999999999999887654332211 2211 233321 123333331 258999999
Q ss_pred CChhh--------------HHHhhhcccc--CCEEEEEecCC
Q 024011 216 MGASY--------------FQRNLGSLNI--DGRLFIIGTQG 241 (274)
Q Consensus 216 ~g~~~--------------~~~~~~~l~~--~g~~v~~g~~~ 241 (274)
+|... ...+++.+.. .++++.++...
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 87421 1233444433 36888887653
No 322
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00073 Score=56.41 Aligned_cols=80 Identities=23% Similarity=0.233 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
..++++|+|++|++|..+++.+...|++|+++.|+.+..+... ..+.... .|..+.+..+.+.+.. .-.++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4579999999999999999999999999999998876654332 2333322 2333332222222211 01248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999985
No 323
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.53 E-value=0.00049 Score=55.88 Aligned_cols=72 Identities=18% Similarity=0.262 Sum_probs=49.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.+++++|+|+++++|..+++.+.+.|++|++++|+..... ... ..+..+..+..+.+.+..+ ++|++|+++|
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~--~id~lv~~ag 76 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-----SGNFHFLQLDLSDDLEPLFDWVP--SVDILCNTAG 76 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-----CCcEEEEECChHHHHHHHHHhhC--CCCEEEECCC
Confidence 4689999999999999999999999999999988754321 111 1222222222344444333 4899999998
No 324
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0012 Score=53.24 Aligned_cols=76 Identities=18% Similarity=0.239 Sum_probs=51.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEE--eCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCI--NYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.++++|+|++|++|..++..+.+. ++|++++|+.++.+.+.+ ......+ |..+.+....+.+.. .++|.+|+++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a 79 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA 79 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 368999999999999999988888 999999999877655543 2222223 333322222222222 2599999999
Q ss_pred Ch
Q 024011 217 GA 218 (274)
Q Consensus 217 g~ 218 (274)
|.
T Consensus 80 g~ 81 (227)
T PRK08219 80 GV 81 (227)
T ss_pred Cc
Confidence 84
No 325
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.53 E-value=0.00091 Score=54.92 Aligned_cols=77 Identities=27% Similarity=0.379 Sum_probs=52.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCCcHHH----HHHHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTEDFVA----RVKEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~~~~----~~~~~~~~~~ 208 (274)
++++||+|++|++|..++..+.+.|++|++++|+.+..+.+.+ .+... . .|..+.+..+ .+.+.. .+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF--GG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc--CC
Confidence 4689999999999999999999999999999998876655432 23222 1 2333322222 222222 34
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+||.+++.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 326
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.52 E-value=0.0005 Score=52.69 Aligned_cols=94 Identities=19% Similarity=0.314 Sum_probs=62.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh--
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-- 219 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-- 219 (274)
++.|+||+|-+|..+.+-+..+|..|++++|+++++...+.. .++..+--+.. .+.+.. .|+|+||++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~---~i~q~Difd~~-~~a~~l--~g~DaVIsA~~~~~~ 75 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV---TILQKDIFDLT-SLASDL--AGHDAVISAFGAGAS 75 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc---eeecccccChh-hhHhhh--cCCceEEEeccCCCC
Confidence 578999999999999999999999999999999987554221 12222211111 122222 3599999988753
Q ss_pred h--------HHHhhhccccC--CEEEEEecCC
Q 024011 220 Y--------FQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 220 ~--------~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
. .+..++.++.- -|++.+|..+
T Consensus 76 ~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 76 DNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred ChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 1 22345556553 4888887765
No 327
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.52 E-value=0.0006 Score=59.04 Aligned_cols=77 Identities=12% Similarity=0.122 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH-HHc--CCCE-EE--eCCCCcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDL--GADV-CI--NYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~--g~~~-~~--~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.|+++||+|++|.+|..+++.+.+.|++|++++|+....... ..+ +... .+ |..+. +.+.+.....++|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA---AKLRKAIAEFKPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH---HHHHHHHhhcCCCEE
Confidence 368999999999999999999999999999999876643222 112 1111 12 33322 233333333358999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 80 ih~A~~ 85 (349)
T TIGR02622 80 FHLAAQ 85 (349)
T ss_pred EECCcc
Confidence 999973
No 328
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.52 E-value=0.00064 Score=55.86 Aligned_cols=78 Identities=24% Similarity=0.303 Sum_probs=51.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCCcHHHHHHH-HhC-CCCccE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFVARVKE-ETG-GKGVDV 211 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~~-~~~-~~~~d~ 211 (274)
++++|+|++|++|..+++.+.+.|++|+++.+++++++.+ +..+... . .|..+.+....+.+ ... -..+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4799999999999999999999999999999987665433 2333222 1 23333332222222 111 124899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999984
No 329
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.51 E-value=0.00084 Score=54.76 Aligned_cols=80 Identities=28% Similarity=0.391 Sum_probs=50.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HH----HHHHcCCCEE-E--eCCCCcHHHHHHHH-hC-CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADVC-I--NYKTEDFVARVKEE-TG-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~----~~~~~g~~~~-~--~~~~~~~~~~~~~~-~~-~~~ 208 (274)
.+++++|+|++|++|..+++.+.+.|++|+++.++... .+ .++..+.... + |..+.+....+.+. .. -.+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999887776542 22 2222333222 2 33333322222221 11 124
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|.||.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999974
No 330
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.50 E-value=0.00084 Score=55.53 Aligned_cols=78 Identities=22% Similarity=0.305 Sum_probs=51.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHH----HHHHcCCCE---EEeCCCCcHHHHH----HHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGADV---CINYKTEDFVARV----KEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~----~~~~~g~~~---~~~~~~~~~~~~~----~~~~~~ 206 (274)
.+++++|+|+++++|..+++.+.+.|++++++.++.+ ..+ .++..+... ..|..+.+....+ .+..
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-- 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF-- 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--
Confidence 5789999999999999999999999999998887543 222 222333322 1244433322222 2222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.++|++|+++|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 248999999984
No 331
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00083 Score=55.22 Aligned_cols=80 Identities=24% Similarity=0.334 Sum_probs=50.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHHH-H---cCCCE-EE--eCCCCcHHH----HHHHHh--
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK-D---LGADV-CI--NYKTEDFVA----RVKEET-- 204 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~~-~---~g~~~-~~--~~~~~~~~~----~~~~~~-- 204 (274)
.+++++|+|++|++|..+++.+.+.|++|++. .|++++.+... + .+... .+ |..+.+... .+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 36899999999999999999999999998775 57666543332 2 22221 22 333322222 222222
Q ss_pred --CCCCccEEEECCCh
Q 024011 205 --GGKGVDVILDCMGA 218 (274)
Q Consensus 205 --~~~~~d~vi~~~g~ 218 (274)
+..++|++|+++|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 11358999999984
No 332
>PRK05855 short chain dehydrogenase; Validated
Probab=97.49 E-value=0.00063 Score=62.87 Aligned_cols=80 Identities=20% Similarity=0.227 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCCcHHHHHHHHh--CCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVARVKEET--GGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~ 209 (274)
.+.++||+|++|++|.++++.+...|++|++++|+.++++.+. +.+... . .|..+.+..+.+.+.. ....+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999987765443 334322 1 2444433333332221 11248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+|+|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999985
No 333
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.49 E-value=0.00089 Score=54.80 Aligned_cols=78 Identities=23% Similarity=0.351 Sum_probs=49.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH----HHcCCCEE-E--eCCCCcHH----HHHHHHhCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC-I--NYKTEDFV----ARVKEETGG 206 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~~-~--~~~~~~~~----~~~~~~~~~ 206 (274)
++++++|+|++|++|..+++.+.+.|++|+++.+ +++..+.. ++.+.... + |..+.+.. +.+.+..+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG- 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 4789999999999999999999999999987654 34443332 23333222 2 33332222 22222222
Q ss_pred CCccEEEECCCh
Q 024011 207 KGVDVILDCMGA 218 (274)
Q Consensus 207 ~~~d~vi~~~g~ 218 (274)
.+|.+|+++|.
T Consensus 84 -~id~vi~~ag~ 94 (247)
T PRK12935 84 -KVDILVNNAGI 94 (247)
T ss_pred -CCCEEEECCCC
Confidence 48999999985
No 334
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00099 Score=55.00 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=50.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHHH----HHcCCCEE---EeCCCCcHHHHHHHHh-C-CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGADVC---INYKTEDFVARVKEET-G-GKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~~ 208 (274)
.+++++|+|+++++|..+++.+.+.|++++++.++ .+..+.+ +..+.... .|..+.+....+.+.. . -.+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999887654 3333322 22343221 2433332222222211 1 125
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 8999999984
No 335
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.48 E-value=0.00072 Score=55.20 Aligned_cols=77 Identities=25% Similarity=0.422 Sum_probs=51.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHHH----HcCCCE-EE--eCCCCcHHHHHH----HHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVK----EETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~----~~~~~~ 207 (274)
++++||+|++|++|..++..+.+.|++++++ .|+.++.+.+. ..+... .. |..+.+....+. +..+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG-- 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--
Confidence 5789999999999999999999999999998 88877654332 222222 22 333322222222 2222
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+||.++|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 49999999974
No 336
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.47 E-value=0.0015 Score=56.63 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=51.5
Q ss_pred CCCCEEEEecCCchHHHH--HHHHHHHcCCeEEEEecChh--h--------------HHHHHHcCCCE-EE--eCCCCcH
Q 024011 138 SPGESFLVHGGSSGIGTF--AIQMGKCQGVRVFVTAGSEE--K--------------LAVCKDLGADV-CI--NYKTEDF 196 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~--~~~~~~~~g~~v~~~~~~~~--~--------------~~~~~~~g~~~-~~--~~~~~~~ 196 (274)
..++++||+|+++++|.+ +++.+ ..|++++++.+..+ + .+.+++.|... .+ |..+.+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 456999999999999999 77888 89999888874221 1 22344556432 23 3333322
Q ss_pred ----HHHHHHHhCCCCccEEEECCChh
Q 024011 197 ----VARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 197 ----~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
.+.+.+.++ ++|+++++++..
T Consensus 118 v~~lie~I~e~~G--~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLG--QVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcC--CCCEEEECCccC
Confidence 333444443 499999999864
No 337
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.46 E-value=0.0013 Score=54.03 Aligned_cols=77 Identities=18% Similarity=0.302 Sum_probs=50.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hH----HHHHHcCCC-EE--EeCCCCcHHH----HHHHHhCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KL----AVCKDLGAD-VC--INYKTEDFVA----RVKEETGGK 207 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~----~~~~~~g~~-~~--~~~~~~~~~~----~~~~~~~~~ 207 (274)
.++++|+|++|++|..+++.+.+.|++|++++|+.. .. +.++..+.. .. .|..+.+... .+.+..+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG-- 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC--
Confidence 368999999999999999999999999999987643 22 222222322 12 2433332222 2222222
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|++|+|+|.
T Consensus 80 ~id~vi~~ag~ 90 (256)
T PRK12745 80 RIDCLVNNAGV 90 (256)
T ss_pred CCCEEEECCcc
Confidence 48999999974
No 338
>PRK09135 pteridine reductase; Provisional
Probab=97.46 E-value=0.0012 Score=53.93 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=50.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHHHH----HcCC--CEE--EeCCCCcHHHHHHHHh--CCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCK----DLGA--DVC--INYKTEDFVARVKEET--GGK 207 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~~~----~~g~--~~~--~~~~~~~~~~~~~~~~--~~~ 207 (274)
.++++||+|++|++|..+++.+.+.|++|++++|+. +..+.+. .... ... .|..+.+....+.+.. .-.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468899999999999999999999999999999863 3333322 2211 111 2443333222222211 012
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+||+++|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 48999999983
No 339
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.43 E-value=0.00065 Score=55.31 Aligned_cols=76 Identities=29% Similarity=0.364 Sum_probs=48.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHH-H---HcCCCE-E--EeCCCCcHHHHH----HHHhCCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-K---DLGADV-C--INYKTEDFVARV----KEETGGKG 208 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~-~---~~g~~~-~--~~~~~~~~~~~~----~~~~~~~~ 208 (274)
+++||+|++|++|..+++.+.+.|++++++.+ ++++.+.. . ..+... . .|..+....+.+ .+.. ..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL--GP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc--CC
Confidence 57899999999999999999999999999887 44443322 1 222221 1 233332222222 2222 34
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|+||+++|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999974
No 340
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.42 E-value=0.001 Score=56.87 Aligned_cols=75 Identities=16% Similarity=0.212 Sum_probs=50.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH---Hc-CC---CEEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DL-GA---DVCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~-g~---~~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.++++||+|++|.+|..+++.+.+.|++|++++|+.+..+... .. +. ...+ |..+.+. +.+... ++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~~ 78 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGS---FELAID--GC 78 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchH---HHHHHc--CC
Confidence 4789999999999999999999999999998888766443222 11 11 1122 3333322 233332 48
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||+++|.
T Consensus 79 d~vih~A~~ 87 (325)
T PLN02989 79 ETVFHTASP 87 (325)
T ss_pred CEEEEeCCC
Confidence 999999973
No 341
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.42 E-value=0.001 Score=56.92 Aligned_cols=75 Identities=17% Similarity=0.238 Sum_probs=50.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc----C--CC-EEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----G--AD-VCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g--~~-~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.|++++|+|++|.+|..+++.+...|++|+++.|+.+..+.+.++ + .. ..+ |..+.+ .+.+... ++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~~ 78 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEES---SFEQAIE--GC 78 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcc---hHHHHHh--CC
Confidence 478999999999999999999999999999888876644332211 1 11 112 222222 2233332 48
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||++++.
T Consensus 79 d~vih~A~~ 87 (322)
T PLN02986 79 DAVFHTASP 87 (322)
T ss_pred CEEEEeCCC
Confidence 999999873
No 342
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0011 Score=54.64 Aligned_cols=80 Identities=18% Similarity=0.295 Sum_probs=49.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh----hhHHH----HHHcCCCE-E--EeCCCCcHHHHHHHHh-C-
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAV----CKDLGADV-C--INYKTEDFVARVKEET-G- 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~----~~~~~----~~~~g~~~-~--~~~~~~~~~~~~~~~~-~- 205 (274)
.+++++|+|++|++|.++++.+.+.|++++++.++. +..+. ++..+... . .|..+.+..+.+.+.. .
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 478999999999999999999999999977765432 22222 22233322 1 2333332222222211 1
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
..++|++|+++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 1358999999985
No 343
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.41 E-value=0.0013 Score=54.03 Aligned_cols=79 Identities=25% Similarity=0.364 Sum_probs=50.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec-ChhhHHHHH-HcCCCE-E--EeCCCCcHHH----HHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK-DLGADV-C--INYKTEDFVA----RVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~-~~~~~~~~~-~~g~~~-~--~~~~~~~~~~----~~~~~~~~~~~ 209 (274)
.+++++|+|++|++|..++..+.+.|++|++..+ ++++.+.+. +++... . .|..+.+... .+.+.. +.++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~i 82 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHF-GKPI 82 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 3678999999999999999999999999988654 444444433 333221 1 2333322222 222222 2248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 83 d~li~~ag~ 91 (253)
T PRK08642 83 TTVVNNALA 91 (253)
T ss_pred eEEEECCCc
Confidence 999999863
No 344
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.41 E-value=0.0026 Score=48.21 Aligned_cols=103 Identities=18% Similarity=0.193 Sum_probs=63.9
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-.-.|++++|.| .|.+|..+++.++.+|++|++++.++-+.-++..-|.... . +.+... ..|++|.+
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~-~---------~~~a~~--~adi~vta 85 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM-T---------LEEALR--DADIFVTA 85 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-----------HHHHTT--T-SEEEE-
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec-C---------HHHHHh--hCCEEEEC
Confidence 345799999999 5999999999999999999999998877655555565432 1 122222 37999999
Q ss_pred CChhh--HHHhhhccccCCEEEEEecCCCCccccchhhHhh
Q 024011 216 MGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA 254 (274)
Q Consensus 216 ~g~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~ 254 (274)
.|... ..+-++.|+++.-+..+|... .++++..+-.
T Consensus 86 TG~~~vi~~e~~~~mkdgail~n~Gh~d---~Eid~~~L~~ 123 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDGAILANAGHFD---VEIDVDALEA 123 (162)
T ss_dssp SSSSSSB-HHHHHHS-TTEEEEESSSST---TSBTHHHHHT
T ss_pred CCCccccCHHHHHHhcCCeEEeccCcCc---eeEeeccccc
Confidence 99754 356678888766555555433 3555544443
No 345
>PLN00015 protochlorophyllide reductase
Probab=97.41 E-value=0.00072 Score=57.51 Aligned_cols=75 Identities=19% Similarity=0.247 Sum_probs=50.7
Q ss_pred EEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHH-HcC---CCE---EEeCCCCcHHHHHHHHh-C-CCCccEEE
Q 024011 144 LVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---ADV---CINYKTEDFVARVKEET-G-GKGVDVIL 213 (274)
Q Consensus 144 lI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~-~~g---~~~---~~~~~~~~~~~~~~~~~-~-~~~~d~vi 213 (274)
+|+|+++++|.++++.+.+.| ++|+++.|++++.+.+. ++. ... ..|..+.+..+.+.+.. . ..++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999999999999 99999999887765443 332 111 23444433333333222 1 13589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 99984
No 346
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.41 E-value=0.0017 Score=56.95 Aligned_cols=109 Identities=22% Similarity=0.296 Sum_probs=73.6
Q ss_pred chHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHH
Q 024011 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (274)
Q Consensus 122 ~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (274)
.+....+..+.+..++++|+++|-.|+ |.|..+..+++..|++|+.++.+++.++.+++......++....++.
T Consensus 150 ~Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~---- 223 (383)
T PRK11705 150 EAQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYR---- 223 (383)
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchh----
Confidence 334455555656778899999999996 57888888888889999999999999888875432211111112221
Q ss_pred HHhCCCCccEEEEC-----CCh----hhHHHhhhccccCCEEEEEe
Q 024011 202 EETGGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 202 ~~~~~~~~d~vi~~-----~g~----~~~~~~~~~l~~~g~~v~~g 238 (274)
+. ...+|.|+.. .|. ..+..+.+.|+++|++++..
T Consensus 224 ~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 224 DL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 11 2358988753 232 23567778999999998764
No 347
>PRK07069 short chain dehydrogenase; Validated
Probab=97.40 E-value=0.00072 Score=55.44 Aligned_cols=74 Identities=19% Similarity=0.307 Sum_probs=49.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHHHH----Hc-CCC----EEEeCCCCcHHHHH----HHHhCCCC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCK----DL-GAD----VCINYKTEDFVARV----KEETGGKG 208 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~~~----~~-g~~----~~~~~~~~~~~~~~----~~~~~~~~ 208 (274)
++|+|++|++|..+++.+.+.|++|++++|+ .++++.+. +. +.. ...|..+.+..+.+ .+.. .+
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 79 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM--GG 79 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc--CC
Confidence 7999999999999999999999999999987 55554332 11 111 11244333322222 2222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+++|.
T Consensus 80 id~vi~~ag~ 89 (251)
T PRK07069 80 LSVLVNNAGV 89 (251)
T ss_pred ccEEEECCCc
Confidence 8999999984
No 348
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.00079 Score=63.39 Aligned_cols=77 Identities=26% Similarity=0.320 Sum_probs=54.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCCcHHHHH----HHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~~ 208 (274)
+++++|+|++|++|..+++.+.+.|++|++++|+++.++.+. ..+.... .|..+.+..+.+ .+.. .+
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~--g~ 448 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH--GH 448 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Confidence 689999999999999999999999999999999988765543 2233221 244333222222 2222 24
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|++|+|+|.
T Consensus 449 id~li~~Ag~ 458 (657)
T PRK07201 449 VDYLVNNAGR 458 (657)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 349
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.38 E-value=0.0015 Score=55.98 Aligned_cols=77 Identities=18% Similarity=0.182 Sum_probs=50.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH-HcCC-C-EEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK-DLGA-D-VCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~-~~g~-~-~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
.|+++||+|++|.+|..+++.+.+.| .+|++.+|+..+.+.+. .+.. . ..+..+-.+ .+.+.+... ++|+||
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~~~--~iD~Vi 79 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD-KERLTRALR--GVDYVV 79 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHh--cCCEEE
Confidence 47899999999999999999988876 68998888766543332 2221 1 122222222 223333333 389999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+++|.
T Consensus 80 h~Ag~ 84 (324)
T TIGR03589 80 HAAAL 84 (324)
T ss_pred ECccc
Confidence 99874
No 350
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.38 E-value=0.0031 Score=48.52 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=62.5
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHH
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (274)
...++...++...+.+...--.|++++|.|++.-+|..+++.+.+.|++|+++.|+.++
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~--------------------- 80 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKN--------------------- 80 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchh---------------------
Confidence 33445444444444444334578999999983346999999999999999888876321
Q ss_pred HHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.+... .+|+||.+++.+.+ -..+.++++-.+++++...
T Consensus 81 --l~~~l~--~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 81 --LKEHTK--QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred --HHHHHh--hCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 112222 27899988887542 1223456666677777654
No 351
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.38 E-value=0.0018 Score=57.55 Aligned_cols=141 Identities=16% Similarity=0.255 Sum_probs=89.7
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCEE-EEEe----------------cCCeeeeEEeeeCCCeEECCCCCCHHhhccCcc
Q 024011 60 YPGLECSGTILSVGKNVSRWKVGDQV-CALL----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (274)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V-~~~~----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (274)
.-|||+++-+.+|+++++..-.|+.= ++-+ .++.|++. +++|+.+..+. .....
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t-~i~~~ 161 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTET-GIGAG 161 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhc-CCCCC
Confidence 35999999999999998776666642 1111 12333333 33334333222 22334
Q ss_pred hHHHHHHHHHhhcC---CCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHH-HHHHcCCCEEEeCCCCcHH
Q 024011 123 VACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA-VCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 123 ~~~~a~~~l~~~~~---~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 197 (274)
+.+.++.++..... ..++++++|.|+ |.+|.++++.++..|+ +|+++.|+.++.+ .+++++.. ..+.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~------ 233 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL------ 233 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH------
Confidence 55666666633222 256899999997 9999999999999998 8999999988865 45566653 2221
Q ss_pred HHHHHHhCCCCccEEEECCChh
Q 024011 198 ARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
+.+.+.. .++|+||++++.+
T Consensus 234 ~~~~~~l--~~aDvVI~aT~s~ 253 (423)
T PRK00045 234 DELPEAL--AEADIVISSTGAP 253 (423)
T ss_pred HHHHHHh--ccCCEEEECCCCC
Confidence 1222222 2489999999864
No 352
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0017 Score=52.56 Aligned_cols=73 Identities=30% Similarity=0.374 Sum_probs=50.5
Q ss_pred EEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc--CCC-EE--EeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VC--INYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 144 lI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+|+|+++++|..+++.+.+.|++|++++|+.++.+.+. ++ +.. .. .|..+.+....+.+.. ..+|++|+++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999999999999999999999877665443 22 222 22 2433433333343333 34899999998
Q ss_pred h
Q 024011 218 A 218 (274)
Q Consensus 218 ~ 218 (274)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 4
No 353
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.37 E-value=0.0013 Score=53.70 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=48.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHH----HHcCCCE-E--EeCCCCcHHHHHHHHh--CCCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVC----KDLGADV-C--INYKTEDFVARVKEET--GGKG 208 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~----~~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~ 208 (274)
+.+++||+|++|++|..+++.+.+.|+++++..++.++ .+.+ ...+... . .|..+.+....+.+.. .-.+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999998876665442 2222 2233221 1 2333332222222111 1135
Q ss_pred ccEEEECCC
Q 024011 209 VDVILDCMG 217 (274)
Q Consensus 209 ~d~vi~~~g 217 (274)
+|.||+++|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 899999998
No 354
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.37 E-value=0.00093 Score=55.50 Aligned_cols=78 Identities=14% Similarity=0.170 Sum_probs=49.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecC-hhhHHHH-HHc----CCCE-E--EeCCCCc----HHHHHHHHh-CC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC-KDL----GADV-C--INYKTED----FVARVKEET-GG 206 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~-~~~~~~~-~~~----g~~~-~--~~~~~~~----~~~~~~~~~-~~ 206 (274)
.+++|+|+++++|.++++.+.+.|++|+++.++ ++.++.+ +++ +... . .|..+.+ ..+.+.+.. ..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999999999999999999999999988654 4444332 222 2111 1 2443332 112222211 11
Q ss_pred -CCccEEEECCCh
Q 024011 207 -KGVDVILDCMGA 218 (274)
Q Consensus 207 -~~~d~vi~~~g~ 218 (274)
.++|++|+|+|.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 358999999984
No 355
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0014 Score=53.54 Aligned_cols=77 Identities=17% Similarity=0.214 Sum_probs=49.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE---EEeCCCCcHHHH-H----HHHh-CCCCccE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV---CINYKTEDFVAR-V----KEET-GGKGVDV 211 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~-~----~~~~-~~~~~d~ 211 (274)
.+++|+|++|++|..+++.+.+.|++|++++|+.+.. .....+... ..|..+.+..+. + .+.. ....+|+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 3689999999999999999999999999999876542 122233222 124333332222 2 1111 2235899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
+|+|+|.
T Consensus 81 ~v~~ag~ 87 (243)
T PRK07023 81 LINNAGT 87 (243)
T ss_pred EEEcCcc
Confidence 9999874
No 356
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.37 E-value=0.002 Score=55.92 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=52.7
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-Hc--CCC-EEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
-..++++||+|++|.+|..+++.+.+.|++|++++|+.+..+.+. .+ +.. ..+..+-.+ .+.+.+... ++|.|
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d~V 83 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE-EGSFDEAVK--GCDGV 83 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC-HHHHHHHHc--CCCEE
Confidence 346789999999999999999999999999999988876544332 21 111 122222222 122333333 48999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 84 ih~A~~ 89 (353)
T PLN02896 84 FHVAAS 89 (353)
T ss_pred EECCcc
Confidence 999874
No 357
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=97.36 E-value=0.0009 Score=55.23 Aligned_cols=39 Identities=28% Similarity=0.300 Sum_probs=33.5
Q ss_pred EEEEecCCchHHHHHHHHHHH----cCCeEEEEecChhhHHHH
Q 024011 142 SFLVHGGSSGIGTFAIQMGKC----QGVRVFVTAGSEEKLAVC 180 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~----~g~~v~~~~~~~~~~~~~ 180 (274)
.++|+|+++++|.++++.+.+ .|++|+++.|++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~ 44 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQL 44 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHH
Confidence 589999999999999887765 799999999998876554
No 358
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0017 Score=53.08 Aligned_cols=80 Identities=15% Similarity=0.209 Sum_probs=49.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC----hhhHHHH----HHcCCCE-E--EeCCCCcHHHHHHHHh-C-
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----EEKLAVC----KDLGADV-C--INYKTEDFVARVKEET-G- 205 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~----~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~~~~-~- 205 (274)
.+++++|+|++|++|..+++.+...|++|+++++. .+..+.+ ...+... . .|..+.+..+.+.+.. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999886643 3333322 2233322 2 2333332222222211 1
Q ss_pred CCCccEEEECCCh
Q 024011 206 GKGVDVILDCMGA 218 (274)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (274)
..++|.||+++|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 1348999999984
No 359
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.35 E-value=0.00074 Score=58.23 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=33.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+++++||+|++|.+|..+++.+...|++|++++|+.+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 4689999999999999999999999999999987654
No 360
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=97.35 E-value=0.0016 Score=53.42 Aligned_cols=78 Identities=28% Similarity=0.354 Sum_probs=51.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh--HHHHHHcCC-----CEE---EeCCC-CcH----HHHHHHH
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGA-----DVC---INYKT-EDF----VARVKEE 203 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~-----~~~---~~~~~-~~~----~~~~~~~ 203 (274)
.+++++|+|+++++|.+++..+.+.|++++++.++.+. .+.+.+... ... .|..+ ... .+.+.+.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999998888877553 233322111 111 34443 222 2222333
Q ss_pred hCCCCccEEEECCCh
Q 024011 204 TGGKGVDVILDCMGA 218 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~ 218 (274)
. .++|++++|+|.
T Consensus 84 ~--g~id~lvnnAg~ 96 (251)
T COG1028 84 F--GRIDILVNNAGI 96 (251)
T ss_pred c--CCCCEEEECCCC
Confidence 2 349999999995
No 361
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.33 E-value=0.0038 Score=52.11 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=61.8
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-c---CCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L---GADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
...+++++|+|+ |++|.+++..+...|++|+++.|+.++.+.+.+ + +.......+ + . ....+|+|
T Consensus 114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~----~-~~~~~Div 182 (270)
T TIGR00507 114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD-----E----L-PLHRVDLI 182 (270)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh-----h----h-cccCccEE
Confidence 355789999998 899999999999999999999999887655532 2 211111111 0 0 11248999
Q ss_pred EECCChhh---H---HHhhhccccCCEEEEEecCC
Q 024011 213 LDCMGASY---F---QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 213 i~~~g~~~---~---~~~~~~l~~~g~~v~~g~~~ 241 (274)
|++++... . ....+.++++..++++....
T Consensus 183 Inatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 183 INATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred EECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 99987531 1 11234567777788776543
No 362
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.32 E-value=0.0021 Score=53.09 Aligned_cols=34 Identities=26% Similarity=0.262 Sum_probs=30.3
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEec
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
+|++++|+|++ +++|..+++.+.+.|++|+++.+
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~ 40 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW 40 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence 58999999997 48999999999999999998753
No 363
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.31 E-value=0.0028 Score=49.35 Aligned_cols=89 Identities=15% Similarity=0.136 Sum_probs=59.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
-.|+++.|+|. |.||..+++.++..|++|++.+++..........+... .++.+.+.+ .|+|+.+..
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~------~~l~ell~~------aDiv~~~~p 100 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEY------VSLDELLAQ------ADIVSLHLP 100 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEE------SSHHHHHHH-------SEEEE-SS
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccccccee------eehhhhcch------hhhhhhhhc
Confidence 35899999996 99999999999999999999999887665444444311 122222221 688887765
Q ss_pred hh------hHHHhhhccccCCEEEEEec
Q 024011 218 AS------YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 218 ~~------~~~~~~~~l~~~g~~v~~g~ 239 (274)
.. .-...++.|+++..+|.++.
T Consensus 101 lt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 101 LTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred cccccceeeeeeeeeccccceEEEeccc
Confidence 31 12455777887777776654
No 364
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.31 E-value=0.016 Score=48.34 Aligned_cols=211 Identities=16% Similarity=0.158 Sum_probs=117.2
Q ss_pred CCCeEEEEEeeeecCh-hhhHhhcCCCCCCCCCCCCCC-CceeEEEEE-ecCCCCCCCCCCEEEEEecC---Ceeee---
Q 024011 26 KDDEVLIKVEATALNR-ADTLQRKGSYPPPKGASPYPG-LECSGTILS-VGKNVSRWKVGDQVCALLGG---GGYAE--- 96 (274)
Q Consensus 26 ~~~ev~V~v~~~~i~~-~D~~~~~g~~~~~~~~p~~~G-~e~~G~V~~-vG~~~~~~~~Gd~V~~~~~~---g~~~~--- 96 (274)
..+||+|+.-+..-.. +|..+..-.-.--.+..-++. .|.+=.|.+ ..++..-|+.|+..+.+..- ....+
T Consensus 29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~Iv~ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~~l~ 108 (371)
T COG0686 29 HGHEVLVETGAGAGSGFDDDDYEAAGAKIVATAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTEALL 108 (371)
T ss_pred CCcEEEEecCCcCCCCCChHHHHHcCCEEecCHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHHHHH
Confidence 4579999998765544 333332211111111122344 566555554 22234459999988877521 10000
Q ss_pred --EEeeeCCCeEECCCC-C----CHHhhccCcchHHHHHHHHHhhc----------CCCCCCEEEEecCCchHHHHHHHH
Q 024011 97 --KVAVPAGQVLPVPSG-V----SLKDAAAFPEVACTVWSTVFMTS----------HLSPGESFLVHGGSSGIGTFAIQM 159 (274)
Q Consensus 97 --~~~~~~~~~~~~p~~-~----~~~~aa~l~~~~~~a~~~l~~~~----------~~~~g~~vlI~Ga~g~iG~~~~~~ 159 (274)
-+..-..-.+.+|++ + +..+.|.-......+++..+... ++.+++ +.|+|+ |.+|.-++++
T Consensus 109 ~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~~~k-v~iiGG-GvvgtnaAki 186 (371)
T COG0686 109 KSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVLPAK-VVVLGG-GVVGTNAAKI 186 (371)
T ss_pred HcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCCCcc-EEEECC-ccccchHHHH
Confidence 000000112223331 1 22333323233444554322221 234555 556675 8999999999
Q ss_pred HHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEECC---Ch----hhHHHhhhcccc
Q 024011 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDCM---GA----SYFQRNLGSLNI 230 (274)
Q Consensus 160 ~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~---g~----~~~~~~~~~l~~ 230 (274)
+..+|++|.+.+++.++++.+..+-...+ ...+..++.+.+. ..|++|.+. |. -..++.++.|++
T Consensus 187 A~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~------~aDlvIgaVLIpgakaPkLvt~e~vk~Mkp 260 (371)
T COG0686 187 AIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK------KADLVIGAVLIPGAKAPKLVTREMVKQMKP 260 (371)
T ss_pred HhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh------hccEEEEEEEecCCCCceehhHHHHHhcCC
Confidence 99999999999999999998876443332 2223333333332 379998764 22 136777899999
Q ss_pred CCEEEEEecCCCCc
Q 024011 231 DGRLFIIGTQGGAK 244 (274)
Q Consensus 231 ~g~~v~~g~~~~~~ 244 (274)
++.++++....+..
T Consensus 261 GsVivDVAiDqGGc 274 (371)
T COG0686 261 GSVIVDVAIDQGGC 274 (371)
T ss_pred CcEEEEEEEcCCCc
Confidence 99999998776543
No 365
>PLN02214 cinnamoyl-CoA reductase
Probab=97.29 E-value=0.0021 Score=55.57 Aligned_cols=78 Identities=15% Similarity=0.230 Sum_probs=50.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHH--HHHHcC---CC-EEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA--VCKDLG---AD-VCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~--~~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
..+++++|+|++|.+|..+++.+.+.|++|.+++|+.+... .+..+. .. ..+..+-.+ .+.+.+... ++|+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~d~ 84 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD-YEALKAAID--GCDG 84 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC-hHHHHHHHh--cCCE
Confidence 35789999999999999999999999999999998765421 122221 11 122222212 122333332 4899
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
||++++.
T Consensus 85 Vih~A~~ 91 (342)
T PLN02214 85 VFHTASP 91 (342)
T ss_pred EEEecCC
Confidence 9999974
No 366
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.29 E-value=0.0014 Score=53.60 Aligned_cols=78 Identities=19% Similarity=0.234 Sum_probs=50.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEE-ecChhhHHHH----HHcCCCE-E--EeCCCCcHHHHHHHHh--CCCCcc
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADV-C--INYKTEDFVARVKEET--GGKGVD 210 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~d 210 (274)
++++|+|++|++|..+++.+.+.|++|+++ .++.++.+.. ++.+... . .|..+.+..+.+.+.. ...++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 579999999999999999999999998774 5665544332 2333221 2 2444433333333321 123589
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999984
No 367
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.28 E-value=0.00078 Score=60.50 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=62.7
Q ss_pred hhcCCCCCCEEE----EecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCC-EEEeCCCCcHHHHHHHHhCCC
Q 024011 133 MTSHLSPGESFL----VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGK 207 (274)
Q Consensus 133 ~~~~~~~g~~vl----I~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 207 (274)
...+.++|+.+| |+|++|++|.+++++++..|++|+.+.+.+.+....+..+.+ .++|.+...+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~--- 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALY--- 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHH---
Confidence 345678888888 888889999999999999999999987665543333333333 345555444444443221
Q ss_pred CccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 208 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 208 ~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+...++.|.++|+++.++...
T Consensus 104 -----------~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 104 -----------EFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred -----------HHHHHHHHhccCCCEEEEEcccc
Confidence 22445566677777777776654
No 368
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.28 E-value=0.002 Score=53.12 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=31.4
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCeEEEEecC
Q 024011 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 139 ~g~~vlI~Ga~g--~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
.++++||+|+++ ++|.+++..+...|++|++++|+
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 468899999984 89999999999999999999887
No 369
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=97.27 E-value=0.0014 Score=55.37 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH---HHHHHcCC-C---EEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVCKDLGA-D---VCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~---~~~~~~g~-~---~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.++.|+|+||+|-||..++..+..+|++|..++|+++.. +.++++.. . .++ |..+.+.. .+.. .|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf---~~ai--~gc 79 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSF---DKAI--DGC 79 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchH---HHHH--hCC
Confidence 578999999999999999999999999999999998863 34555441 1 122 33333322 2222 359
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|.||.++.-
T Consensus 80 dgVfH~Asp 88 (327)
T KOG1502|consen 80 DGVFHTASP 88 (327)
T ss_pred CEEEEeCcc
Confidence 999998873
No 370
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.26 E-value=0.0045 Score=51.62 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=67.2
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||...+....+....---.|++++|.|.+.-+|.-++.++...|++|+++.++.. +
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~-------------------~--- 194 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK-------------------D--- 194 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-------------------h---
Confidence 455655555555544332346999999999666999999999999999998875421 1
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.+.+. ..|+||.++|...+-. -++++++..++.+|...
T Consensus 195 -l~~~~~--~ADIVIsAvg~p~~i~-~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 195 -MASYLK--DADVIVSAVGKPGLVT-KDVVKEGAVIIDVGNTP 233 (286)
T ss_pred -HHHHHh--hCCEEEECCCCCcccC-HHHcCCCcEEEEcCCCc
Confidence 122222 2899999999764311 15678888888888764
No 371
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.25 E-value=0.0026 Score=56.05 Aligned_cols=105 Identities=21% Similarity=0.297 Sum_probs=64.3
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHH------HH-HHc-CCCEE-EeCCCCcHHHHHHHHhCC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA------VC-KDL-GADVC-INYKTEDFVARVKEETGG 206 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~------~~-~~~-g~~~~-~~~~~~~~~~~~~~~~~~ 206 (274)
.-..+.+++|+|++|.+|..+++.+.+.|++|++++|+.++.+ .. ... +...+ .|..+.+....+.+..+
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~- 134 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG- 134 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC-
Confidence 3456789999999999999999999999999999999875432 11 112 22222 24444333333322111
Q ss_pred CCccEEEECCChhh-------------HHHhhhccccC--CEEEEEecCC
Q 024011 207 KGVDVILDCMGASY-------------FQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-------------~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
.++|+||+|++... ...+++.+... .+++.++...
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 15999999986310 11233434333 4788887654
No 372
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.25 E-value=0.0017 Score=56.14 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=32.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
+++||+||+|.+|..+++.+...|.+|++++|+.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 57999999999999999999999999999998753
No 373
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0016 Score=53.29 Aligned_cols=79 Identities=18% Similarity=0.275 Sum_probs=49.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHH----HHHcCCCEE---EeCCCCcHHHHHHHHh-C-CCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAV----CKDLGADVC---INYKTEDFVARVKEET-G-GKGV 209 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~----~~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~~~ 209 (274)
+++++|+|++|++|..+++.+.+.|++|++.. +++++.+. ++..+.... .|..+.+..+.+.+.. . ...+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999988776 34443322 233343222 2433332222222211 1 1248
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|++|+++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999984
No 374
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.21 E-value=0.0055 Score=51.66 Aligned_cols=97 Identities=11% Similarity=0.148 Sum_probs=58.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCe-EEEEecCh---hhHHHH-HHc---CCC-EE--EeCCCCcHHHHHHHHhCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE---EKLAVC-KDL---GAD-VC--INYKTEDFVARVKEETGG 206 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~---~~~~~~-~~~---g~~-~~--~~~~~~~~~~~~~~~~~~ 206 (274)
-.+++++|+|+ ||+|.+++..+...|++ |+++.|+. ++.+.+ +++ +.. .. .+.++ .+.+.+...
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~---~~~~~~~~~- 198 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND---TEKLKAEIA- 198 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh---hhHHHhhhc-
Confidence 35789999998 89999999999999995 99999986 444333 222 111 11 12211 112222222
Q ss_pred CCccEEEECCChhh------HHH-hhhccccCCEEEEEecC
Q 024011 207 KGVDVILDCMGASY------FQR-NLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 207 ~~~d~vi~~~g~~~------~~~-~~~~l~~~g~~v~~g~~ 240 (274)
.+|++|||..... ... ....+.+...++++-..
T Consensus 199 -~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~ 238 (289)
T PRK12548 199 -SSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYN 238 (289)
T ss_pred -cCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCC
Confidence 3799999875211 111 13456666667776543
No 375
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.20 E-value=0.0026 Score=52.08 Aligned_cols=78 Identities=18% Similarity=0.254 Sum_probs=48.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHH----HHcCCCEE---EeCCCCcHHHHHHH-HhC-CCCcc
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADVC---INYKTEDFVARVKE-ETG-GKGVD 210 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~-~~~-~~~~d 210 (274)
++++|+|+++++|..+++.+.+.|++++++. +++++.+.. +..+.... .|..+.+..+.+.+ ... -..+|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999999999999988765 454444332 22332222 23333222222222 111 12489
Q ss_pred EEEECCCh
Q 024011 211 VILDCMGA 218 (274)
Q Consensus 211 ~vi~~~g~ 218 (274)
++|+++|.
T Consensus 83 ~li~~ag~ 90 (248)
T PRK06947 83 ALVNNAGI 90 (248)
T ss_pred EEEECCcc
Confidence 99999983
No 376
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=97.18 E-value=0.00034 Score=51.13 Aligned_cols=49 Identities=41% Similarity=0.708 Sum_probs=36.1
Q ss_pred cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC--hhhH-HHhhhccccCCEEEEEec
Q 024011 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--ASYF-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g--~~~~-~~~~~~l~~~g~~v~~g~ 239 (274)
+|+++++|++..++ ....++|+|||++| ...+ ..+++++ ++|+++.++.
T Consensus 1 LGAd~vidy~~~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~ 52 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG 52 (127)
T ss_dssp CT-SEEEETTCSHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred CCcCEEecCCCccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence 68999999996665 44567999999999 6554 6777888 9999999984
No 377
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.17 E-value=0.0068 Score=50.75 Aligned_cols=79 Identities=18% Similarity=0.154 Sum_probs=57.0
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.-.|++++|.|+++-+|..++.++...|++|+++.+....+ .+.+ +.+|+||+++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L-----------------------~~~~--~~aDIvI~At 210 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL-----------------------PELV--KQADIIVGAV 210 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH-----------------------HHHh--ccCCEEEEcc
Confidence 35689999999855599999999999999888877532211 1111 2489999999
Q ss_pred ChhhHHHhhhccccCCEEEEEecCC
Q 024011 217 GASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 217 g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
|.+.. -..+.++++..+++++...
T Consensus 211 G~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 211 GKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred CCCCc-CCHHHcCCCCEEEEEEEee
Confidence 86542 2235688888888888654
No 378
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.17 E-value=0.039 Score=46.59 Aligned_cols=167 Identities=15% Similarity=0.103 Sum_probs=98.9
Q ss_pred CCCCCceeEEEEEecCCCCCCCCCCEEEEEecCC---------------------------eeeeEEeeeCCCeEECCCC
Q 024011 59 PYPGLECSGTILSVGKNVSRWKVGDQVCALLGGG---------------------------GYAEKVAVPAGQVLPVPSG 111 (274)
Q Consensus 59 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g---------------------------~~~~~~~~~~~~~~~~p~~ 111 (274)
.+|-.-+ ++|++ |.++.+.+|+||+++.+-+ .|-+|.++..+..+.-
T Consensus 32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~--- 105 (314)
T PF11017_consen 32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP--- 105 (314)
T ss_pred ccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc---
Confidence 3443333 67777 7889999999999986421 2333444333332210
Q ss_pred CCHHh-hccCcchHHHHHHHHHhhcC---CCCCCEEEEecCCchHHHHHHHHHH--HcCCeEEEEecChhhHHHHHHcCC
Q 024011 112 VSLKD-AAAFPEVACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGK--CQGVRVFVTAGSEEKLAVCKDLGA 185 (274)
Q Consensus 112 ~~~~~-aa~l~~~~~~a~~~l~~~~~---~~~g~~vlI~Ga~g~iG~~~~~~~~--~~g~~v~~~~~~~~~~~~~~~~g~ 185 (274)
+.++ -+.+-+.+.|.|.. .+... .-..+.|+|+.|++=.++.++..++ ..+.+++.++ |+....+.+.+|.
T Consensus 106 -~~e~~~~LlrPLf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~lg~ 182 (314)
T PF11017_consen 106 -EREDWQMLLRPLFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESLGC 182 (314)
T ss_pred -chhHHHHHHHHHHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhccCC
Confidence 1122 23345566677753 23221 2345789999999999999999998 3345888887 5555567777875
Q ss_pred -CEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCC-EEEEEecCC
Q 024011 186 -DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDG-RLFIIGTQG 241 (274)
Q Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g-~~v~~g~~~ 241 (274)
+.++.+++ +..... ..--+++|.+|... ...+.+.+...- ..+.+|...
T Consensus 183 Yd~V~~Yd~------i~~l~~-~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 183 YDEVLTYDD------IDSLDA-PQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred ceEEeehhh------hhhccC-CCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 56665543 222211 23568899999754 344444444432 456666655
No 379
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.16 E-value=0.0016 Score=55.14 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=31.1
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCeEEEEec
Q 024011 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 139 ~g~~vlI~Ga~--g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
.||+++|+|++ +|||.++++.+.+.|++|++.++
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 58999999995 89999999999999999999764
No 380
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=97.15 E-value=0.002 Score=54.98 Aligned_cols=38 Identities=21% Similarity=0.270 Sum_probs=34.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~ 176 (274)
.++++||+|++|.+|..++..+...|.+|++++|+.+.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 46899999999999999999999999999999887654
No 381
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.14 E-value=0.005 Score=47.59 Aligned_cols=101 Identities=20% Similarity=0.269 Sum_probs=70.3
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHH----HcCCCEE--EeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~~ 205 (274)
....+++|+.++=.|+ |.|...+++++.. ..+|++++++++.++..+ ++|.+.+ +..+..+ .+.+.
T Consensus 28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~---~L~~~-- 100 (187)
T COG2242 28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPE---ALPDL-- 100 (187)
T ss_pred HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchH---hhcCC--
Confidence 3457899999888887 4578888888544 359999999999887664 5776533 3333222 22221
Q ss_pred CCCccEEEECCCh---hhHHHhhhccccCCEEEEEecCC
Q 024011 206 GKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 206 ~~~~d~vi~~~g~---~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+|.+|-.-|. ..++.+++.++++||++.....-
T Consensus 101 -~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~naitl 138 (187)
T COG2242 101 -PSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAITL 138 (187)
T ss_pred -CCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEeecH
Confidence 148999866554 24788999999999999876643
No 382
>PLN02686 cinnamoyl-CoA reductase
Probab=97.13 E-value=0.0039 Score=54.44 Aligned_cols=45 Identities=18% Similarity=0.152 Sum_probs=38.0
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 181 (274)
...++++||+|++|.+|..+++.+.+.|++|+++.++.+..+.++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 355789999999999999999999999999998888776554443
No 383
>PLN02650 dihydroflavonol-4-reductase
Probab=97.10 E-value=0.003 Score=54.73 Aligned_cols=74 Identities=20% Similarity=0.223 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHc----CC--C-EEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GA--D-VCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~--~-~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
..+++||+|++|.+|..++..+...|.+|++++|+.+..+.+..+ +. . ..+ |..+.+. +.+... ++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~~--~~ 78 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGS---FDDAIR--GC 78 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhh---HHHHHh--CC
Confidence 467899999999999999999999999999998876554433221 11 1 112 3333222 223332 48
Q ss_pred cEEEECCC
Q 024011 210 DVILDCMG 217 (274)
Q Consensus 210 d~vi~~~g 217 (274)
|.||++++
T Consensus 79 d~ViH~A~ 86 (351)
T PLN02650 79 TGVFHVAT 86 (351)
T ss_pred CEEEEeCC
Confidence 99999886
No 384
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.09 E-value=0.015 Score=46.07 Aligned_cols=100 Identities=15% Similarity=0.221 Sum_probs=65.1
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH----HcC-CCEEEeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLG-ADVCINYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~ 205 (274)
....+.++++++-.|+ |. |...+.+++..+ .+|++++.+++.++.++ .++ .+.+... ..+..+.+.. .
T Consensus 34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~-~~d~~~~l~~-~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLI-KGEAPEILFT-I- 108 (198)
T ss_pred HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEE-EechhhhHhh-c-
Confidence 3457889999999997 33 888888887653 58999999998877654 344 2222111 1122222222 1
Q ss_pred CCCccEEEECCCh----hhHHHhhhccccCCEEEEE
Q 024011 206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~ 237 (274)
...+|.||.+.+. ..+..+.+.|+++|+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 1359999986553 2366777889999999863
No 385
>PLN00198 anthocyanidin reductase; Provisional
Probab=97.09 E-value=0.0036 Score=53.92 Aligned_cols=76 Identities=17% Similarity=0.188 Sum_probs=49.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHH---HHc---CCCEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC---KDL---GADVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~---~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.++++||+|++|.+|..+++.+...|++|+++.|+.+..... ..+ +.-..+..+-.+. +.+.+... ++|+|
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~--~~d~v 84 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDE-ESFEAPIA--GCDLV 84 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCCh-HHHHHHHh--cCCEE
Confidence 478999999999999999999999999998888776543221 111 1112222222221 22333332 48999
Q ss_pred EECCC
Q 024011 213 LDCMG 217 (274)
Q Consensus 213 i~~~g 217 (274)
|++++
T Consensus 85 ih~A~ 89 (338)
T PLN00198 85 FHVAT 89 (338)
T ss_pred EEeCC
Confidence 99987
No 386
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.08 E-value=0.0032 Score=51.07 Aligned_cols=76 Identities=26% Similarity=0.288 Sum_probs=48.4
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHH----HHHHcCCCE-E--EeCCCCcHHHHHHHHh-C-CCCccEE
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA----VCKDLGADV-C--INYKTEDFVARVKEET-G-GKGVDVI 212 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~----~~~~~g~~~-~--~~~~~~~~~~~~~~~~-~-~~~~d~v 212 (274)
++|+|++|++|..+++.+.+.|++|++++|+. ++.+ .+++.+... . .|..+.+..+.+.+.. . -.++|.|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999998875 3322 223344322 2 2443333222222211 0 1248999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 999985
No 387
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.004 Score=51.06 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=34.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHHH
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVC 180 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~~ 180 (274)
++++|+|++|++|..+++.+.+.|++|++++|++ +.++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~ 42 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL 42 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH
Confidence 5799999999999999999999999999999886 444443
No 388
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.07 E-value=0.0027 Score=57.63 Aligned_cols=74 Identities=19% Similarity=0.234 Sum_probs=54.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+.+|++++|.|. |..|++++++++..|++|++++++.++.+.+++.|.......+ ..+.+ ..+|+||.+
T Consensus 8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~---~~~~l------~~~D~VV~S 77 (488)
T PRK03369 8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSD---AVQQI------ADYALVVTS 77 (488)
T ss_pred cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcc---hHhHh------hcCCEEEEC
Confidence 3567899999996 9999999999999999999999776666666677764432111 11112 237999999
Q ss_pred CChh
Q 024011 216 MGAS 219 (274)
Q Consensus 216 ~g~~ 219 (274)
.|.+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 9864
No 389
>PLN02427 UDP-apiose/xylose synthase
Probab=97.06 E-value=0.0039 Score=54.81 Aligned_cols=77 Identities=9% Similarity=0.019 Sum_probs=50.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCC------CEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGA------DVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
-..++|||+|++|-+|..+++.+.+. |.+|++++++.++.+.+...+. -..+..+-.+ .+.+.+... ++|
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~--~~d 88 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH-DSRLEGLIK--MAD 88 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC-hHHHHHHhh--cCC
Confidence 34568999999999999999999887 5899999987766554433221 1122222222 123333333 489
Q ss_pred EEEECCC
Q 024011 211 VILDCMG 217 (274)
Q Consensus 211 ~vi~~~g 217 (274)
+||++++
T Consensus 89 ~ViHlAa 95 (386)
T PLN02427 89 LTINLAA 95 (386)
T ss_pred EEEEccc
Confidence 9999997
No 390
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=97.05 E-value=0.0045 Score=50.44 Aligned_cols=35 Identities=31% Similarity=0.289 Sum_probs=31.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
++++|+|++|++|..+++.+.+.|++|++++|+.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~ 37 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN 37 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH
Confidence 57999999999999999999999999999998743
No 391
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.04 E-value=0.0015 Score=46.48 Aligned_cols=92 Identities=24% Similarity=0.284 Sum_probs=61.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHH-HcCCeEEEEecChhhHHHHHHc----C--CCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDL----G--ADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
|+++||-.|+ |.|..+..+++ ..+++|+.++.+++.++.+++. + ....+. ..++ ... ......+|+
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~--~~d~-~~~--~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFV--QGDA-EFD--PDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEE--ESCC-HGG--TTTSSCEEE
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEE--ECcc-ccC--cccCCCCCE
Confidence 5789999986 56888888888 4788999999999988777532 2 222221 1122 111 112235999
Q ss_pred EEECC-Chh----h------HHHhhhccccCCEEEEE
Q 024011 212 ILDCM-GAS----Y------FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 212 vi~~~-g~~----~------~~~~~~~l~~~g~~v~~ 237 (274)
|+... ... . +....+.|+++|+++..
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 99877 321 1 46677889999998864
No 392
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.04 E-value=0.011 Score=52.64 Aligned_cols=140 Identities=17% Similarity=0.280 Sum_probs=88.9
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCEEE-----------------EEecCCeeeeEEeeeCCCeEE---C-CCCCCHHhhc
Q 024011 60 YPGLECSGTILSVGKNVSRWKVGDQVC-----------------ALLGGGGYAEKVAVPAGQVLP---V-PSGVSLKDAA 118 (274)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~-----------------~~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~aa 118 (274)
.-|.|+++.+.+|+++++..-.|+.=+ +...++.|++++.++. .+.. + +..+|...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A 167 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA 167 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence 458999999999999987766666422 1112467888877765 2221 2 2222222221
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHH-HHHHcCCCEEEeCCCCcH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLA-VCKDLGADVCINYKTEDF 196 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 196 (274)
.-.+. +..+..++++++|.|+ |.+|..+++.++..| .+|+++.|+.++.+ .+++++... ++.
T Consensus 168 --------v~la~-~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~-i~~----- 231 (417)
T TIGR01035 168 --------VELAE-RIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA-VKF----- 231 (417)
T ss_pred --------HHHHH-HHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-eeH-----
Confidence 11122 2233456899999997 999999999999999 58999999988765 445666532 221
Q ss_pred HHHHHHHhCCCCccEEEECCChh
Q 024011 197 VARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
+.+.+... ++|+||++++..
T Consensus 232 -~~l~~~l~--~aDvVi~aT~s~ 251 (417)
T TIGR01035 232 -EDLEEYLA--EADIVISSTGAP 251 (417)
T ss_pred -HHHHHHHh--hCCEEEECCCCC
Confidence 12222222 489999999864
No 393
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.04 E-value=0.0085 Score=45.30 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=61.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
..+++++|+|+ |++|..+++.+.+.| .+|++++++.++.+.+. +++... ......+..+ .. ..+|+|+++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~--~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEE----LL--AEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhh----cc--ccCCEEEeC
Confidence 45789999997 999999999999886 68999999988776543 444321 0001111111 11 348999999
Q ss_pred CChhhH-----HHhhhccccCCEEEEEecC
Q 024011 216 MGASYF-----QRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 216 ~g~~~~-----~~~~~~l~~~g~~v~~g~~ 240 (274)
+..... ......++++..+++++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 89 TPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred cCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 876432 1112345677777777654
No 394
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.03 E-value=0.00046 Score=57.49 Aligned_cols=100 Identities=26% Similarity=0.404 Sum_probs=61.2
Q ss_pred HHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH----HcCCC--EEEeCCCCcHHHHHH
Q 024011 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD--VCINYKTEDFVARVK 201 (274)
Q Consensus 128 ~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~ 201 (274)
+..+.++.++++|++||-+|+ |.|..+..++++.|++|+.++.++++.+.++ +.|.. ..+.. .++ +
T Consensus 51 ~~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~----~ 122 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDY----R 122 (273)
T ss_dssp HHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-G----G
T ss_pred HHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eec----c
Confidence 334557789999999999996 5899999999999999999999999887775 34421 11211 122 1
Q ss_pred HHhCCCCccEEEEC-----CChh----hHHHhhhccccCCEEEEE
Q 024011 202 EETGGKGVDVILDC-----MGAS----YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 202 ~~~~~~~~d~vi~~-----~g~~----~~~~~~~~l~~~g~~v~~ 237 (274)
+... .+|.|+.. .|.. .+..+.+.|+|+|++++-
T Consensus 123 ~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 123 DLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp G-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred ccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 1111 58987653 3321 256777899999999754
No 395
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.02 E-value=0.0054 Score=51.40 Aligned_cols=95 Identities=17% Similarity=0.157 Sum_probs=62.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
..+++++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.+ +......... .+. .+.. ..+|+|||+
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~~~----~~~~--~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-LEL----QEEL--ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-ccc----hhcc--ccCCEEEEC
Confidence 45789999997 999999999999999 599999999988766643 3211101110 011 1111 348999999
Q ss_pred CChhhH------HHhhhccccCCEEEEEecC
Q 024011 216 MGASYF------QRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 216 ~g~~~~------~~~~~~l~~~g~~v~~g~~ 240 (274)
+..... +...+.+++...++++-..
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~~~v~DivY~ 223 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPGTIVYDMIYG 223 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEeecC
Confidence 864321 1223566777777777553
No 396
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.01 E-value=0.042 Score=43.63 Aligned_cols=88 Identities=18% Similarity=0.242 Sum_probs=58.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
-.|++++|+|. |.+|..+++.+...|++|++++++.++++.+.+ ++... ++.. ++. ...+|+++.++
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~------~l~----~~~~Dv~vp~A 93 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPE------EIY----SVDADVFAPCA 93 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecch------hhc----cccCCEEEecc
Confidence 35799999997 899999999999999999999999888777654 35332 2211 111 12388888776
Q ss_pred Chh-hHHHhhhccccCCEEEEEec
Q 024011 217 GAS-YFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 217 g~~-~~~~~~~~l~~~g~~v~~g~ 239 (274)
... .....++.++ .+++.-+.
T Consensus 94 ~~~~I~~~~~~~l~--~~~v~~~A 115 (200)
T cd01075 94 LGGVINDDTIPQLK--AKAIAGAA 115 (200)
T ss_pred cccccCHHHHHHcC--CCEEEECC
Confidence 543 2333444453 34554443
No 397
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.00 E-value=0.0096 Score=52.38 Aligned_cols=90 Identities=20% Similarity=0.300 Sum_probs=56.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHH--cCCC-EEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD--LGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
|+|.|+ |.+|..+++.+.+.+- +|++.+|+.++++.+.+ .+.. .....+..+ .+.+.+...+ .|+||||+|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~~--~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-PESLAELLRG--CDVVINCAG 76 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-HHHHHHHHTT--SSEEEE-SS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-HHHHHHHHhc--CCEEEECCc
Confidence 689999 9999999999998864 89999999999877754 2222 112222223 2335555544 699999999
Q ss_pred hhhHHHhh-hccccCCEEEE
Q 024011 218 ASYFQRNL-GSLNIDGRLFI 236 (274)
Q Consensus 218 ~~~~~~~~-~~l~~~g~~v~ 236 (274)
.......+ .+++.+-.+++
T Consensus 77 p~~~~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 77 PFFGEPVARACIEAGVHYVD 96 (386)
T ss_dssp GGGHHHHHHHHHHHT-EEEE
T ss_pred cchhHHHHHHHHHhCCCeec
Confidence 65433333 34555566666
No 398
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=96.99 E-value=0.0058 Score=52.88 Aligned_cols=75 Identities=13% Similarity=0.010 Sum_probs=47.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++|||+|++|-+|..+++.+... |.+|++++|+.++...+.....-.....+-.+..+.+.+... ++|+||++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK--KCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc--CCCEEEECcc
Confidence 46999999999999999999875 689999998765543332211112222222111122333332 4899999875
No 399
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.98 E-value=0.014 Score=51.56 Aligned_cols=74 Identities=9% Similarity=0.149 Sum_probs=53.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-.+++++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+. +++...... .+.+.+.... +|+||+|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~------~~~l~~~l~~--aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY------LSELPQLIKK--ADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec------HHHHHHHhcc--CCEEEEC
Confidence 45789999997 9999999999999996 7999999988776654 444222221 1233333333 8999999
Q ss_pred CChhh
Q 024011 216 MGASY 220 (274)
Q Consensus 216 ~g~~~ 220 (274)
++.+.
T Consensus 250 T~a~~ 254 (414)
T PRK13940 250 VNVLE 254 (414)
T ss_pred cCCCC
Confidence 99754
No 400
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.97 E-value=0.0038 Score=52.43 Aligned_cols=74 Identities=20% Similarity=0.094 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cCCCE-EEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
.+++++|.|+ |+.+.+++..+...|+ +++++.|+.++.+.+.+ ++... +.... ..+++.... ..+|+|||+
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~~~~~~~~--~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GDSGGLAIE--KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---chhhhhhcc--cCCCEEEEC
Confidence 5789999997 9999999999999998 79999999888766643 32111 11111 011122222 248999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+..
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 864
No 401
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=96.97 E-value=0.0046 Score=58.31 Aligned_cols=78 Identities=10% Similarity=0.008 Sum_probs=49.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+++++|||+||+|-+|..+++.+.+. |.+|++++|.............-..+..+-.+....+.+... ++|+||+++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViHlA 390 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIK--KCDVVLPLV 390 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhc--CCCEEEECc
Confidence 56789999999999999999988875 799999998765433221111112222222221122233332 489999988
Q ss_pred C
Q 024011 217 G 217 (274)
Q Consensus 217 g 217 (274)
+
T Consensus 391 a 391 (660)
T PRK08125 391 A 391 (660)
T ss_pred c
Confidence 6
No 402
>PLN02240 UDP-glucose 4-epimerase
Probab=96.95 E-value=0.0056 Score=52.96 Aligned_cols=76 Identities=22% Similarity=0.405 Sum_probs=48.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh----HHHHHHc----CCC-EEE--eCCCCcHHHHHHHHhCCCC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDL----GAD-VCI--NYKTEDFVARVKEETGGKG 208 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~----g~~-~~~--~~~~~~~~~~~~~~~~~~~ 208 (274)
+++++|+|++|.+|..+++.+...|.+|+++++.... .+.+... +.. ... |..+.+ .+.+.....+
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~l~~~~~~~~ 81 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKE---ALEKVFASTR 81 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHH---HHHHHHHhCC
Confidence 6889999999999999999999999999998764321 1222211 111 122 333322 2333322235
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
+|.||++++.
T Consensus 82 ~d~vih~a~~ 91 (352)
T PLN02240 82 FDAVIHFAGL 91 (352)
T ss_pred CCEEEEcccc
Confidence 8999999873
No 403
>PLN00016 RNA-binding protein; Provisional
Probab=96.95 E-value=0.0044 Score=54.34 Aligned_cols=97 Identities=20% Similarity=0.239 Sum_probs=62.7
Q ss_pred CCEEEEe----cCCchHHHHHHHHHHHcCCeEEEEecChhhHHH-----------HHHcCCCEEEeCCCCcHHHHHHHHh
Q 024011 140 GESFLVH----GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-----------CKDLGADVCINYKTEDFVARVKEET 204 (274)
Q Consensus 140 g~~vlI~----Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (274)
.++|||+ |++|.+|..+++.+...|.+|++++|+.+..+. +...+...+ ..+..+ +.+..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d----~~~~~ 126 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTV-WGDPAD----VKSKV 126 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEE-EecHHH----HHhhh
Confidence 4689999 999999999999999999999999988764321 112233222 122212 22223
Q ss_pred CCCCccEEEECCChhh--HHHhhhccccC--CEEEEEecCC
Q 024011 205 GGKGVDVILDCMGASY--FQRNLGSLNID--GRLFIIGTQG 241 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~--~~~~~~~l~~~--g~~v~~g~~~ 241 (274)
...++|+||++.+... ....++.++.. .+++.++...
T Consensus 127 ~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~ 167 (378)
T PLN00016 127 AGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAG 167 (378)
T ss_pred ccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHh
Confidence 3346999999987532 34555655433 3788776543
No 404
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.94 E-value=0.0069 Score=49.18 Aligned_cols=71 Identities=18% Similarity=0.234 Sum_probs=54.1
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChh--hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
|+|+|++|.+|..+++.+...+++|.+..|+.. ..+.++..|...+ ..+.. ..+.+.+... |+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~-~~~~l~~al~--g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYD-DPESLVAALK--GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT--HHHHHHHHT--TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccC-CHHHHHHHHc--CCceEEeecC
Confidence 689999999999999999999999999999864 3566777887654 33332 2445555554 5999999888
No 405
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=96.94 E-value=0.0025 Score=51.77 Aligned_cols=72 Identities=19% Similarity=0.307 Sum_probs=45.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHHcCCC-EE--EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++++|+|+++++|..+++.+.+.+ ..++...++.... .. ... .. .|..+.+..+.+.+..+ ++|++|+|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~--~~~~~~~~~Dls~~~~~~~~~~~~~--~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQ--HDNVQWHALDVTDEAEIKQLSEQFT--QLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cc--cCceEEEEecCCCHHHHHHHHHhcC--CCCEEEEC
Confidence 368999999999999999888875 5666555544321 11 111 11 34444443444444443 49999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 75 aG~ 77 (235)
T PRK09009 75 VGM 77 (235)
T ss_pred Ccc
Confidence 985
No 406
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.93 E-value=0.0024 Score=56.13 Aligned_cols=75 Identities=17% Similarity=0.315 Sum_probs=51.0
Q ss_pred CCCEEEEecC----------------CchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCC-CcHHHHHH
Q 024011 139 PGESFLVHGG----------------SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVK 201 (274)
Q Consensus 139 ~g~~vlI~Ga----------------~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~ 201 (274)
.|+++||+|+ +|.+|.++++.+...|++|+++.++.+ .+. ..+. ..++..+ .+..+.+.
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~--~~~~-~~~dv~~~~~~~~~v~ 262 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT--PAGV-KRIDVESAQEMLDAVL 262 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC--CCCc-EEEccCCHHHHHHHHH
Confidence 6899999999 566999999999999999999987653 211 1111 2334333 33344444
Q ss_pred HHhCCCCccEEEECCChh
Q 024011 202 EETGGKGVDVILDCMGAS 219 (274)
Q Consensus 202 ~~~~~~~~d~vi~~~g~~ 219 (274)
+..+ .+|++|+|++..
T Consensus 263 ~~~~--~~DilI~~Aav~ 278 (399)
T PRK05579 263 AALP--QADIFIMAAAVA 278 (399)
T ss_pred HhcC--CCCEEEEccccc
Confidence 4433 489999999853
No 407
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.93 E-value=0.0052 Score=51.28 Aligned_cols=98 Identities=13% Similarity=0.145 Sum_probs=60.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
.+|++++|.|+ ||.+.+++..++..|+ +++++.|+.++.+.+.+.-........... ..+......+|++||++
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~----~~~~~~~~~~dliINaT 198 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA----LADLEGLEEADLLINAT 198 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc----ccccccccccCEEEECC
Confidence 35899999997 9999999999999996 899999999988777543221110000000 00000000389999988
Q ss_pred ChhhHH------HhhhccccCCEEEEEecC
Q 024011 217 GASYFQ------RNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 217 g~~~~~------~~~~~l~~~g~~v~~g~~ 240 (274)
...... ...+.+++.-.+.++-..
T Consensus 199 p~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~ 228 (283)
T COG0169 199 PVGMAGPEGDSPVPAELLPKGAIVYDVVYN 228 (283)
T ss_pred CCCCCCCCCCCCCcHHhcCcCCEEEEeccC
Confidence 642110 113556666666666543
No 408
>PLN02583 cinnamoyl-CoA reductase
Probab=96.91 E-value=0.01 Score=50.21 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=33.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecCh
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~ 174 (274)
.++++++|+|++|.+|..+++.+.+.|++|+++.|+.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~ 40 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN 40 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 3568999999999999999999999999999999853
No 409
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.89 E-value=0.0048 Score=47.58 Aligned_cols=101 Identities=19% Similarity=0.206 Sum_probs=67.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC-C----------------CCcHHHHHHH
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-K----------------TEDFVARVKE 202 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~----------------~~~~~~~~~~ 202 (274)
..+++|+|+ |.+|..++++++.+|+++++.+...++++.....+...+... . .......+.+
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 367899996 999999999999999999999999988888877665443221 0 1222333444
Q ss_pred HhCCCCccEEEECCCh-----h--hHHHhhhccccCCEEEEEecCCCC
Q 024011 203 ETGGKGVDVILDCMGA-----S--YFQRNLGSLNIDGRLFIIGTQGGA 243 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~-----~--~~~~~~~~l~~~g~~v~~g~~~~~ 243 (274)
.... +|++|.+.-. + .....++.|+++..++++.-..+.
T Consensus 99 ~i~~--~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~gG 144 (168)
T PF01262_consen 99 FIAP--ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQGG 144 (168)
T ss_dssp HHHH---SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT-
T ss_pred HHhh--CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCCC
Confidence 3332 7999864321 1 245677889988888888655443
No 410
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.87 E-value=0.0018 Score=52.95 Aligned_cols=67 Identities=16% Similarity=0.234 Sum_probs=47.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (274)
|+|+|++|-||.++++.+...|.+|++++|++.+.+........ ..+.+.+... .++|+|||-+|.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~---------~~~~~~~~~~-~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT---------LWEGLADALT-LGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc---------ccchhhhccc-CCCCEEEECCCCc
Confidence 58999999999999999999999999999998765432111111 1112222222 2599999999964
No 411
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.86 E-value=0.013 Score=49.03 Aligned_cols=76 Identities=17% Similarity=0.135 Sum_probs=45.5
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH-Hc----CCC-E--E--EeCCCCcHHHHHHHHhCCCCccE
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DL----GAD-V--C--INYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~----g~~-~--~--~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
|||+||+|.+|..+++.+.+.+. +++++++++..+-.++ ++ ... . . ...-+-...+.+.......++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999998888875 8999999998875554 33 111 1 1 01112223445566666567999
Q ss_pred EEECCCh
Q 024011 212 ILDCMGA 218 (274)
Q Consensus 212 vi~~~g~ 218 (274)
||.++.-
T Consensus 81 VfHaAA~ 87 (293)
T PF02719_consen 81 VFHAAAL 87 (293)
T ss_dssp EEE----
T ss_pred EEEChhc
Confidence 9999885
No 412
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=96.84 E-value=0.0053 Score=50.11 Aligned_cols=70 Identities=29% Similarity=0.462 Sum_probs=47.2
Q ss_pred cCC--chHHHHHHHHHHHcCCeEEEEecChhhH----HHHH-HcCCCEEEe--CCCCc----HHHHHHHHhCCCCccEEE
Q 024011 147 GGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCK-DLGADVCIN--YKTED----FVARVKEETGGKGVDVIL 213 (274)
Q Consensus 147 Ga~--g~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~-~~g~~~~~~--~~~~~----~~~~~~~~~~~~~~d~vi 213 (274)
|++ +++|.++++.+.+.|++|++++++.+++ +.+. +.+.. ++. ..+.+ +.+.+.+..+ ..+|+++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~-g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFG-GRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHC-SSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcC-CCeEEEE
Confidence 445 9999999999999999999999999873 3333 44543 443 33332 2233333441 3499999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+|+|.
T Consensus 79 ~~a~~ 83 (241)
T PF13561_consen 79 NNAGI 83 (241)
T ss_dssp EEEES
T ss_pred ecccc
Confidence 98763
No 413
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.84 E-value=0.019 Score=45.65 Aligned_cols=114 Identities=11% Similarity=0.108 Sum_probs=66.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.|++++|.|+ |.+|...++.+...|++|+++.+... .+..+.+.+. ......... + ... .++|+||-+++
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~--~---~~l--~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGK-IRWKQKEFE--P---SDI--VDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCC--h---hhc--CCceEEEEcCC
Confidence 4789999997 99999999999999999999876432 2222222221 112111111 0 011 34899999998
Q ss_pred hhhHHHhhhccccCCEEEEEecCCCCccccchhhHhhcc-eEEEEe
Q 024011 218 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR-LTVQGI 262 (274)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~-~~i~g~ 262 (274)
.+..+..+......+.++.+.... ....+-....+.++ +++.-+
T Consensus 80 d~elN~~i~~~a~~~~lvn~~d~~-~~~~f~~Pa~~~~g~l~iaIs 124 (202)
T PRK06718 80 DPRVNEQVKEDLPENALFNVITDA-ESGNVVFPSALHRGKLTISVS 124 (202)
T ss_pred CHHHHHHHHHHHHhCCcEEECCCC-ccCeEEEeeEEEcCCeEEEEE
Confidence 877666655444445555443332 22345555555444 444333
No 414
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.84 E-value=0.0034 Score=53.59 Aligned_cols=72 Identities=15% Similarity=0.244 Sum_probs=50.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+++|+|++|.+|..+++.+.+.|.+|++++|+.+....+...+...+ .|..+. +.+.+... ++|.||++++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~---~~l~~~~~--~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDP---ASLRKAVA--GCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCH---HHHHHHHh--CCCEEEEecee
Confidence 68999999999999999999999999999998765443333333322 133222 23444443 38999998863
No 415
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.83 E-value=0.026 Score=41.18 Aligned_cols=93 Identities=14% Similarity=0.259 Sum_probs=56.5
Q ss_pred EEEecCCchHHHHHHHHHHHcC--CeEEEEe--cChhhH-HHHHHcCCCEEEeCCCCcH---H----------------H
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQG--VRVFVTA--GSEEKL-AVCKDLGADVCINYKTEDF---V----------------A 198 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~---~----------------~ 198 (274)
+.|.|++|.||..+..+.++.. ++|+..+ ++-+.+ +.++++.+..+.-.+.... . +
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 5789999999999999999997 6777665 333333 5566788877765443211 1 1
Q ss_pred HHHHHhCCCCccEEEECCCh-hhHHHhhhccccCCEEE
Q 024011 199 RVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLF 235 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v 235 (274)
.+.+......+|+|+++..+ .-+...+..++.+=++.
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia 118 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA 118 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence 12222222358888887644 44777777777654443
No 416
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.83 E-value=0.021 Score=47.64 Aligned_cols=97 Identities=14% Similarity=0.072 Sum_probs=67.9
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+.+..+....---.|++++|.|.+.-+|.-++.++...++.|+++.+... ++.+
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~-------------------~l~~ 198 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK-------------------NLRH 198 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC-------------------CHHH
Confidence 355665555555544322235999999999888999999999999999988764321 2222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.++ ..|++|.++|.+.+-. -++++++..++.+|...
T Consensus 199 ~~~------~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin~ 234 (285)
T PRK10792 199 HVR------NADLLVVAVGKPGFIP-GEWIKPGAIVIDVGINR 234 (285)
T ss_pred HHh------hCCEEEEcCCCccccc-HHHcCCCcEEEEccccc
Confidence 221 2899999999765322 37889999999998543
No 417
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.82 E-value=0.0086 Score=45.75 Aligned_cols=78 Identities=18% Similarity=0.261 Sum_probs=47.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhH-------HHHHHcCCCEE-E--eCCCCcHHHHHHH-HhC-CC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL-------AVCKDLGADVC-I--NYKTEDFVARVKE-ETG-GK 207 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~-------~~~~~~g~~~~-~--~~~~~~~~~~~~~-~~~-~~ 207 (274)
++++|+|++|++|.++++.+.+.|. .|+++.|+++.. +.+++.+.... + |..+.+..+.+.+ ... ..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999998887 677777765432 22333343322 2 3322222222211 111 13
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
.+|.+++++|.
T Consensus 81 ~id~li~~ag~ 91 (180)
T smart00822 81 PLRGVIHAAGV 91 (180)
T ss_pred CeeEEEEcccc
Confidence 48999999973
No 418
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.80 E-value=0.0084 Score=48.71 Aligned_cols=76 Identities=17% Similarity=0.148 Sum_probs=46.9
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecCh-hhHHH----HHHcCCCE-E--EeCCCCcHHHHHHHH-h-CCCCccEE
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAV----CKDLGADV-C--INYKTEDFVARVKEE-T-GGKGVDVI 212 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~-~~~~~----~~~~g~~~-~--~~~~~~~~~~~~~~~-~-~~~~~d~v 212 (274)
++|+|+++++|..+++.+.+.|++|+++.++. ++.+. +++.+... . .|..+.+..+.+.+. . ....+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999999999998887653 33322 22333322 1 233332222222221 1 11348999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|+++|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01831 81 VLNAGI 86 (239)
T ss_pred EECCCC
Confidence 999873
No 419
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.80 E-value=0.0041 Score=50.30 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=50.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cCCCE-EEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
|||+||+|-+|..++..+.+.|.+|+...++......... ..... ..|..+.+..+.+.+. ..+|.||++++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~---~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEK---ANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHH---HTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccc---cCceEEEEeecc
Confidence 7899999999999999999999999888877765543332 22222 2244443333333332 258999999885
No 420
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.80 E-value=0.02 Score=47.77 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=67.0
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||........|+...---.|++++|.|.+.-+|.-++.++.+.|++|+++... ..+..+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-------------------t~~l~~ 197 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-------------------TRDLAA 197 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-------------------CCCHHH
Confidence 3455555555555443323469999999998888999999999999999875432 122222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.++ ..|+||-++|...+-. -++++++..++.+|...
T Consensus 198 ~~~------~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 198 HTR------QADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR 233 (285)
T ss_pred Hhh------hCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence 222 2799999999755322 27899999999998654
No 421
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.80 E-value=0.017 Score=48.45 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=36.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 181 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~ 181 (274)
..+++++|.|+ ||.+.+++..+...|+ +++++.|+.++.+.+.
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34789999997 9999999999999998 7899999988876664
No 422
>PRK04148 hypothetical protein; Provisional
Probab=96.77 E-value=0.023 Score=41.76 Aligned_cols=76 Identities=16% Similarity=0.124 Sum_probs=53.6
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEe-CCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-YKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
..+++++++.|. | .|..+++.+.+.|++|++++.+++..+.+++.+.+.+.+ ..+.+. ++. +++|+++..
T Consensus 14 ~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~-----~~y--~~a~liysi 84 (134)
T PRK04148 14 KGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL-----EIY--KNAKLIYSI 84 (134)
T ss_pred cccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-----HHH--hcCCEEEEe
Confidence 345688999997 5 888777788889999999999999999888887665543 222221 112 347888876
Q ss_pred CChhhH
Q 024011 216 MGASYF 221 (274)
Q Consensus 216 ~g~~~~ 221 (274)
--...+
T Consensus 85 rpp~el 90 (134)
T PRK04148 85 RPPRDL 90 (134)
T ss_pred CCCHHH
Confidence 654443
No 423
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.75 E-value=0.017 Score=48.56 Aligned_cols=93 Identities=16% Similarity=0.083 Sum_probs=58.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cC---C-CEEEeCCCCcHHHHHHHHhCCCCccEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LG---A-DVCINYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g---~-~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
.+++++|.|+ |+.|.+++..+...|+ +++++.|+.++.+.+.+ +. . ..+... ++. .+.. ..+|+|
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~----~~~~--~~aDiV 196 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG--SDL----AAAL--AAADGL 196 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cch----Hhhh--CCCCEE
Confidence 4689999997 9999999999999998 89999999888766542 21 1 122111 111 1112 248999
Q ss_pred EECC--Chhh---HHHhhhccccCCEEEEEecC
Q 024011 213 LDCM--GASY---FQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 213 i~~~--g~~~---~~~~~~~l~~~g~~v~~g~~ 240 (274)
||++ |... .+-..+.+++...++++-..
T Consensus 197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~ 229 (284)
T PRK12549 197 VHATPTGMAKHPGLPLPAELLRPGLWVADIVYF 229 (284)
T ss_pred EECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeC
Confidence 9995 3211 11122446666666666543
No 424
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.75 E-value=0.021 Score=43.50 Aligned_cols=83 Identities=19% Similarity=0.079 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|++++|.|+ |.+|..-++.+...|++|.+++ ++..+.+.+++.-. +.... +. ...-.++|+||-+.+.
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~-~~~~~--~~-----~~dl~~a~lViaaT~d 80 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYIT-WKQKT--FS-----NDDIKDAHLIYAATNQ 80 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcE-EEecc--cC-----hhcCCCceEEEECCCC
Confidence 4789999997 9999999999999999999884 33334444443211 21111 10 0111358999999888
Q ss_pred hhHHHhhhccccCC
Q 024011 219 SYFQRNLGSLNIDG 232 (274)
Q Consensus 219 ~~~~~~~~~l~~~g 232 (274)
...+..+....+..
T Consensus 81 ~e~N~~i~~~a~~~ 94 (157)
T PRK06719 81 HAVNMMVKQAAHDF 94 (157)
T ss_pred HHHHHHHHHHHHHC
Confidence 77666655554333
No 425
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.75 E-value=0.0082 Score=50.34 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=59.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCE-EEeCCCCcHHHHHHH-HhCCCC-ccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKE-ETGGKG-VDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~-~~~~~~-~d~vi~~~g~ 218 (274)
+++|+|++|.+|..+++.+.+.|++|.+.+|+.++.. ..+... ..|.++.+......+ ...-.+ +|.++.+.+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 4899999999999999999999999999999877542 122222 234444332222221 111145 8999887763
Q ss_pred h-----hHHHhhhccccCC--EEEEEecC
Q 024011 219 S-----YFQRNLGSLNIDG--RLFIIGTQ 240 (274)
Q Consensus 219 ~-----~~~~~~~~l~~~g--~~v~~g~~ 240 (274)
. .....++.++..| +++.++..
T Consensus 78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~ 106 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKGVRRFVLLSAS 106 (285)
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEEeecc
Confidence 1 1233444444443 78777653
No 426
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=96.75 E-value=0.0056 Score=53.05 Aligned_cols=75 Identities=11% Similarity=0.112 Sum_probs=44.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEE-EecChhh--HHHHHHc--CCCE-E--EeCCCCcHHHHHHHHhCCCCccEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFV-TAGSEEK--LAVCKDL--GADV-C--INYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~-~~~~~~~--~~~~~~~--g~~~-~--~~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+++||+|++|.+|..+++.+.+.|.++++ +++.... ...+... +... . .|..+.+ .+.+.....++|+|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~~D~V 78 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRA---ELARVFTEHQPDCV 78 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChH---HHHHHHhhcCCCEE
Confidence 47999999999999999999999987554 4443221 1112121 1111 1 2333322 33333333358999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 79 ih~A~~ 84 (355)
T PRK10217 79 MHLAAE 84 (355)
T ss_pred EECCcc
Confidence 999974
No 427
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.73 E-value=0.015 Score=49.00 Aligned_cols=96 Identities=15% Similarity=0.062 Sum_probs=60.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHc----CCC-EEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL----GAD-VCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
..++++||-.|+++ |..+..+++ .|+ +|++++.++..++.+++. +.. .+.... .+. ... ....+|
T Consensus 157 ~~~g~~VLDvGcGs--G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~-~~~----~~~-~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS--GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL-IYL----EQP-IEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh--hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe-ccc----ccc-cCCCce
Confidence 45789999999733 776666555 465 899999998877766531 211 111111 111 111 124699
Q ss_pred EEEECCChh----hHHHhhhccccCCEEEEEecCC
Q 024011 211 VILDCMGAS----YFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 211 ~vi~~~g~~----~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+|+.+.... .+....+.++++|.++..|...
T Consensus 228 lVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~~ 262 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPGGWLILSGILE 262 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCcH
Confidence 999876543 2456678899999999988653
No 428
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.72 E-value=0.0059 Score=50.30 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=53.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
+|||+|++|- |..++..+.+.|.+|+++.+++...+.+.+.+...+..... +- +.+.+.....++|+|||++-
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l-~~-~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGAL-DP-QELREFLKRHSIDILVDATH 74 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCC-CH-HHHHHHHHhcCCCEEEEcCC
Confidence 6999999776 99999888889999999999988777776665544432221 11 23445555567999999876
No 429
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.72 E-value=0.028 Score=46.83 Aligned_cols=97 Identities=15% Similarity=0.107 Sum_probs=66.0
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+....|....---.|++++|.|.+.-+|.-++.++...|+.|.+...... ++
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~-------------------~l-- 194 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK-------------------DL-- 194 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH-------------------HH--
Confidence 345555555555533322236999999999779999999999999999987643221 11
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+.+. ..|+|+-++|...+-. -++++++..++.+|...
T Consensus 195 --~~~~~--~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 195 --SFYTQ--NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR 232 (285)
T ss_pred --HHHHH--hCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence 11221 2799999999765422 35778998999998643
No 430
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=96.71 E-value=0.0057 Score=51.24 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=43.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++||+|++|.+|..+++.+...|.+|++++|+. .|..+ .+.+.+...+..+|+||++++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~--------------~d~~~---~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ--------------LDLTD---PEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc--------------cCCCC---HHHHHHHHHhCCCCEEEECCcc
Confidence 479999999999999999999999999988751 12222 2233333333347999998874
No 431
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.71 E-value=0.033 Score=43.72 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=61.5
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCcc
Q 024011 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 134 ~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d 210 (274)
...+++|+++|..|++ .|..+..+++.. ..+|++++.++.. ...+...+ .|..+....+.+.+.....++|
T Consensus 27 ~~~i~~g~~VLDiG~G--tG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAA--PGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCC--CCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence 4567899999999973 344555555544 3489999988754 11222222 2333333344555555556799
Q ss_pred EEEECC-----Ch-------------hhHHHhhhccccCCEEEEEec
Q 024011 211 VILDCM-----GA-------------SYFQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 211 ~vi~~~-----g~-------------~~~~~~~~~l~~~g~~v~~g~ 239 (274)
+|+... |. ..+..+.+.++++|+++....
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 999532 21 134566788999999998653
No 432
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.69 E-value=0.046 Score=43.83 Aligned_cols=97 Identities=21% Similarity=0.101 Sum_probs=64.7
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHHH----cCCCE--EEeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~~ 204 (274)
+...+++++++|-.|+ |.|..++.+++..+ .+|+.++.+++..+.+++ .+... +...+.... ..
T Consensus 70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~------~~ 141 (212)
T PRK13942 70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG------YE 141 (212)
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC------CC
Confidence 4567889999999986 56777777777665 599999999887766643 34322 222221111 11
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEE
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~ 237 (274)
....||.|+-..... ......+.|+++|+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 224699987665443 356677899999998875
No 433
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.69 E-value=0.025 Score=43.06 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=59.0
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHH
Q 024011 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (274)
..+|+.....+..++...---.|++++|.|.+.-+|.-++.++.+.|+.|.......+.++
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~------------------- 74 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ------------------- 74 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH-------------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc-------------------
Confidence 3455555555555544333357999999999999999999999999999988765432222
Q ss_pred HHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+ .+ +..|+||-++|...+- -.++++++..++++|...
T Consensus 75 ~----~~--~~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 75 E----IT--RRADIVVSAVGKPNLI-KADWIKPGAVVIDVGINY 111 (160)
T ss_dssp H----HH--TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEE
T ss_pred c----ee--eeccEEeeeecccccc-ccccccCCcEEEecCCcc
Confidence 1 11 1279999999875542 235788888888887654
No 434
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.68 E-value=0.014 Score=52.57 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=53.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHH----H-cCCCEE----EeCCCCcHHHHHHHHhCCC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK----D-LGADVC----INYKTEDFVARVKEETGGK 207 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~----~-~g~~~~----~~~~~~~~~~~~~~~~~~~ 207 (274)
-.|++|||+||+|.+|..++.-..+.+. ++++.++++.++.... + ++.... -|..+ .+.+.+...+.
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD---~~~~~~~~~~~ 324 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD---RDRVERAMEGH 324 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc---HHHHHHHHhcC
Confidence 3589999999999999887776666665 8888999888764443 2 221211 13333 33445555556
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
++|+||.++.-
T Consensus 325 kvd~VfHAAA~ 335 (588)
T COG1086 325 KVDIVFHAAAL 335 (588)
T ss_pred CCceEEEhhhh
Confidence 69999998874
No 435
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.67 E-value=0.015 Score=45.43 Aligned_cols=77 Identities=19% Similarity=0.307 Sum_probs=46.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-eEEEEecCh-------hhHHHHHHcCCCEEE---eCCCCcHHHHHHHHh-CC-CC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSE-------EKLAVCKDLGADVCI---NYKTEDFVARVKEET-GG-KG 208 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~-------~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~-~~-~~ 208 (274)
++||+|+.|++|..+++.+...+. +++++.|+. +.++.+++.|..... |..+.+....+.+.. .. ..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999998876 899999882 123455566664332 333333333333322 11 35
Q ss_pred ccEEEECCCh
Q 024011 209 VDVILDCMGA 218 (274)
Q Consensus 209 ~d~vi~~~g~ 218 (274)
++.||.++|.
T Consensus 82 i~gVih~ag~ 91 (181)
T PF08659_consen 82 IDGVIHAAGV 91 (181)
T ss_dssp EEEEEE----
T ss_pred cceeeeeeee
Confidence 8999999985
No 436
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.66 E-value=0.036 Score=44.42 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=74.3
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH----HcCCCEEEeCCC-CcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGADVCINYKT-EDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~-~~~~~~~~~~~~ 205 (274)
...+.+..+++|=.| .++|+.++.++.... .+++.+++++++.+.++ +.|.+..+..-. .+..+.+.+ ..
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~-~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSR-LL 129 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHh-cc
Confidence 345566789999998 478999999998876 48999999999887765 456544322222 355555554 22
Q ss_pred CCCccEEEE-CCCh---hhHHHhhhccccCCEEEEEecCCC
Q 024011 206 GKGVDVILD-CMGA---SYFQRNLGSLNIDGRLFIIGTQGG 242 (274)
Q Consensus 206 ~~~~d~vi~-~~g~---~~~~~~~~~l~~~g~~v~~g~~~~ 242 (274)
...||.||- +.-. ..++.+++.++++|-++.=+....
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNvl~~ 170 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADNVLFG 170 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeecccC
Confidence 345998854 4433 247889999999998887766554
No 437
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=96.66 E-value=0.01 Score=63.27 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=32.6
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHc-CCeEEEEecC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGS 173 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~-g~~v~~~~~~ 173 (274)
+.+++++||+|+++|||..+++.+.+. |+++++++|+
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 457899999999999999998887766 7999999988
No 438
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.65 E-value=0.0099 Score=52.00 Aligned_cols=77 Identities=12% Similarity=0.044 Sum_probs=49.0
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 137 ~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
+..+++|||+|++|-+|..++..+.+.|.+|++++|..........+.. .....+..+. +.+..... ++|+||+++
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~-~~~~~Dl~d~-~~~~~~~~--~~D~Vih~A 93 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCH-EFHLVDLRVM-ENCLKVTK--GVDHVFNLA 93 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccc-eEEECCCCCH-HHHHHHHh--CCCEEEEcc
Confidence 3467899999999999999999999999999999975432110001111 2221222222 22333222 489999998
Q ss_pred C
Q 024011 217 G 217 (274)
Q Consensus 217 g 217 (274)
+
T Consensus 94 a 94 (370)
T PLN02695 94 A 94 (370)
T ss_pred c
Confidence 5
No 439
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=96.64 E-value=0.0066 Score=51.50 Aligned_cols=74 Identities=19% Similarity=0.268 Sum_probs=45.8
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHHcCCCEE-EeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
|||+|++|.+|..+++.+...|. +|+++++..... .+.++..... .+.++.+..+.+.+. .-.++|+||++++.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKG-AFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhh-ccCCCCEEEECccc
Confidence 58999999999999999999998 688877654322 1222222111 223333333333321 11359999999873
No 440
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.63 E-value=0.052 Score=47.65 Aligned_cols=94 Identities=19% Similarity=0.252 Sum_probs=64.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHH-HHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV-CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-.++++||.|+ |-+|..+++.+...|. ++++..|+.++.+. +++++...+. .+++...... +|+||-+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~-------l~el~~~l~~--~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA-------LEELLEALAE--ADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec-------HHHHHHhhhh--CCEEEEe
Confidence 36889999998 9999999999999996 88888999988754 4578844321 2334444433 8999999
Q ss_pred CChhh----HHHhhhccccCC--EEEEEecCC
Q 024011 216 MGASY----FQRNLGSLNIDG--RLFIIGTQG 241 (274)
Q Consensus 216 ~g~~~----~~~~~~~l~~~g--~~v~~g~~~ 241 (274)
+|.+. .....+.++..- -+++++.+-
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 88753 223334444332 466666654
No 441
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=96.62 E-value=0.012 Score=49.95 Aligned_cols=74 Identities=18% Similarity=0.154 Sum_probs=44.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcC--CeEEEEecCh--hhHHHHHHcC---CCEEE--eCCCCcHHHHHHHHhCCCCccEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSE--EKLAVCKDLG---ADVCI--NYKTEDFVARVKEETGGKGVDVI 212 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~--~~~~~~~~~g---~~~~~--~~~~~~~~~~~~~~~~~~~~d~v 212 (274)
+++|+|++|.+|..+++.+.+.| .+|++.++.. .+.+.+.++. ....+ |..+.+ .+.+......+|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRE---LVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHH---HHHHHHhhcCCCEE
Confidence 48999999999999999888876 6888877532 1222222221 11222 333332 23333322348999
Q ss_pred EECCCh
Q 024011 213 LDCMGA 218 (274)
Q Consensus 213 i~~~g~ 218 (274)
|++++.
T Consensus 78 i~~a~~ 83 (317)
T TIGR01181 78 VHFAAE 83 (317)
T ss_pred EEcccc
Confidence 999974
No 442
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.61 E-value=0.038 Score=46.12 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=67.4
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||........+....---.|++++|.|.+.-+|.-++.++...|+.|+++..... +..+
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~-------------------~l~~ 203 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD-------------------DLKK 203 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC-------------------CHHH
Confidence 455555555555543322237999999999888999999999999999988763221 1111
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+ +..|++|.++|.+.+- --++++++..++.+|...
T Consensus 204 ----~~--~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin~ 239 (287)
T PRK14176 204 ----YT--LDADILVVATGVKHLI-KADMVKEGAVIFDVGITK 239 (287)
T ss_pred ----HH--hhCCEEEEccCCcccc-CHHHcCCCcEEEEecccc
Confidence 22 2379999999976532 345889999999998753
No 443
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.59 E-value=0.032 Score=46.88 Aligned_cols=96 Identities=11% Similarity=0.112 Sum_probs=65.6
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEe-cChhhHHHHHHcCCCEEEeCCCCcHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKDLGADVCINYKTEDFV 197 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (274)
.+||...+.+..|....---.|++++|+|.++.+|.-++.++.+.|+.|+++. |+.+ .
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~--------------------l- 195 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD--------------------L- 195 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC--------------------H-
Confidence 35565555555554433234699999999999999999999999999999984 4431 1
Q ss_pred HHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.+.. +..|+|+-+.|...+-. -.+++++..++.+|...
T Consensus 196 ---~e~~--~~ADIVIsavg~~~~v~-~~~lk~GavVIDvGin~ 233 (296)
T PRK14188 196 ---PAVC--RRADILVAAVGRPEMVK-GDWIKPGATVIDVGINR 233 (296)
T ss_pred ---HHHH--hcCCEEEEecCChhhcc-hheecCCCEEEEcCCcc
Confidence 1111 12789998888754211 13478888888888654
No 444
>PLN02572 UDP-sulfoquinovose synthase
Probab=96.58 E-value=0.017 Score=51.77 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=31.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEec
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~ 172 (274)
..++++||+||+|.+|..+++.+...|++|+++++
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 35689999999999999999999999999999763
No 445
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=96.57 E-value=0.0026 Score=53.36 Aligned_cols=67 Identities=22% Similarity=0.188 Sum_probs=45.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
|||+|++|.+|..+++.+.+.|++|++++|+.+..+..... ...+..... ..+.. .++|+||++++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~----~~~~~--~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE---GYKPWAPLA----ESEAL--EGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce---eeecccccc----hhhhc--CCCCEEEECCCC
Confidence 58999999999999999999999999999987754322111 111111111 11222 358999999974
No 446
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.57 E-value=0.026 Score=38.87 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=55.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcC---CeEEEE-ecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG---VRVFVT-AGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g---~~v~~~-~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (274)
++.|.|+ |.+|.++++-+.+.| .+++++ .|++++.+.+. +++.... . .+..+.+.+ .|+||.+.
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~-~---~~~~~~~~~------advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQAT-A---DDNEEAAQE------ADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEE-S---EEHHHHHHH------TSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccc-c---CChHHhhcc------CCEEEEEE
Confidence 4667786 999999999999999 899955 99999987775 4553322 1 122333322 79999999
Q ss_pred ChhhHHHhhhcc---ccCCEEEEE
Q 024011 217 GASYFQRNLGSL---NIDGRLFII 237 (274)
Q Consensus 217 g~~~~~~~~~~l---~~~g~~v~~ 237 (274)
-...+...++.+ .++..++.+
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 876655555443 344444443
No 447
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.56 E-value=0.076 Score=43.03 Aligned_cols=99 Identities=11% Similarity=0.219 Sum_probs=61.4
Q ss_pred HHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCe---EEEEecC----hhhH--------HHHHHcCCCEEEeCCC
Q 024011 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR---VFVTAGS----EEKL--------AVCKDLGADVCINYKT 193 (274)
Q Consensus 129 ~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~---v~~~~~~----~~~~--------~~~~~~g~~~~~~~~~ 193 (274)
.+++....--.+++++|.|+ |+.|.+++..+...|++ +++++|+ .++. +.+++.+... . .
T Consensus 14 ~al~~~g~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~ 88 (226)
T cd05311 14 NALKLVGKKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G 88 (226)
T ss_pred HHHHHhCCCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c
Confidence 34433332245789999998 99999999999999985 9999988 3432 2223332211 1 1
Q ss_pred CcHHHHHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEe
Q 024011 194 EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g 238 (274)
.++.+.+ . ++|++|++++... ....++.|.++..++.+.
T Consensus 89 ~~l~~~l----~--~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 GTLKEAL----K--GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred CCHHHHH----h--cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 1232333 2 3899999997332 245567777766666554
No 448
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.56 E-value=0.015 Score=50.43 Aligned_cols=49 Identities=14% Similarity=0.068 Sum_probs=38.0
Q ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh
Q 024011 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (274)
Q Consensus 126 ~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~ 175 (274)
|+|--++.+..+ .+++++|+|++|-+|..++..+...|.+|+++++...
T Consensus 2 ~~~~~~~~~~~~-~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~ 50 (348)
T PRK15181 2 TAYEELRTKLVL-APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST 50 (348)
T ss_pred chhhhhhhcccc-cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 345444333333 3578999999999999999999999999999987543
No 449
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=96.56 E-value=0.016 Score=49.85 Aligned_cols=74 Identities=22% Similarity=0.281 Sum_probs=46.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhH----HHHHHcCC-C-EE--EeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDLGA-D-VC--INYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~----~~~~~~g~-~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
++||+|++|.+|..+++.+.+.|.+|+++++..+.. ..+.+.+. . .. .|..+.+. +.+.....++|+||
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~d~vv 78 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL---LTEILHDHAIDTVI 78 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHH---HHHHHhcCCCCEEE
Confidence 689999999999999999999999999887542211 11222221 1 12 23333222 33323223599999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
++++.
T Consensus 79 h~a~~ 83 (338)
T PRK10675 79 HFAGL 83 (338)
T ss_pred ECCcc
Confidence 99863
No 450
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.55 E-value=0.054 Score=43.18 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=66.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.|++++|.|+ |.+|..-++.+...|++|++++.... .++.+.+.+.-...... .. ... . .++++||-+.+
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~-~~-~~d----l--~~~~lVi~at~ 78 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARC-FD-ADI----L--EGAFLVIAATD 78 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCC-CC-HHH----h--CCcEEEEECCC
Confidence 4789999997 99999999999999999999876543 34444444422222111 11 111 1 35899999998
Q ss_pred hhhHH-HhhhccccCCEEEEEecCCCCccccchhhHhhcc-eEEEEe
Q 024011 218 ASYFQ-RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR-LTVQGI 262 (274)
Q Consensus 218 ~~~~~-~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~-~~i~g~ 262 (274)
....+ ......+..|..+.+..... ...+.....+.++ ++|.-+
T Consensus 79 d~~ln~~i~~~a~~~~ilvn~~d~~e-~~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 79 DEELNRRVAHAARARGVPVNVVDDPE-LCSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred CHHHHHHHHHHHHHcCCEEEECCCcc-cCeEEEeeEEEcCCEEEEEE
Confidence 76443 34444455565554433222 2344444444444 444433
No 451
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.54 E-value=0.054 Score=40.27 Aligned_cols=96 Identities=16% Similarity=0.072 Sum_probs=65.1
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHH
Q 024011 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (274)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (274)
.++........++...---.|++++|+|.+..+|.-++.++.+.|++|..+.++...++ +.
T Consensus 8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~-------------------~~ 68 (140)
T cd05212 8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ-------------------SK 68 (140)
T ss_pred cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH-------------------HH
Confidence 44444444444544332346999999999999999999999999999998875432221 11
Q ss_pred HHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+ +..|+|+-++|...+ ---++++++-.++.+|...
T Consensus 69 v------~~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 69 V------HDADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK 103 (140)
T ss_pred H------hhCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence 2 127888888886532 2246788888888777543
No 452
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=96.53 E-value=0.0056 Score=48.64 Aligned_cols=78 Identities=19% Similarity=0.355 Sum_probs=51.3
Q ss_pred CEEEEecCCchHHHHHHHHHH-HcCCeEEEEe-cChhh-HHHHHHcC---C-CEE--EeCCC----CcHHHHHHHHhCCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTA-GSEEK-LAVCKDLG---A-DVC--INYKT----EDFVARVKEETGGK 207 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~-~~g~~v~~~~-~~~~~-~~~~~~~g---~-~~~--~~~~~----~~~~~~~~~~~~~~ 207 (274)
++++|+|+..|||+-+++.+. ..|.++++.. |+.++ .+++.... . -++ +|.+. +++.+++.+..+..
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 569999999999988877665 5577665554 55666 33333221 1 122 23332 45666777777778
Q ss_pred CccEEEECCCh
Q 024011 208 GVDVILDCMGA 218 (274)
Q Consensus 208 ~~d~vi~~~g~ 218 (274)
|.|++++|+|.
T Consensus 84 GlnlLinNaGi 94 (249)
T KOG1611|consen 84 GLNLLINNAGI 94 (249)
T ss_pred CceEEEeccce
Confidence 89999999995
No 453
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.52 E-value=0.04 Score=43.10 Aligned_cols=118 Identities=10% Similarity=0.029 Sum_probs=74.0
Q ss_pred cCcchHHHHHHHHHhhcCC----------CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE
Q 024011 119 AFPEVACTVWSTVFMTSHL----------SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 188 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~----------~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~ 188 (274)
.+||........|... ++ -.|++++|.|.+.-+|.=++.++.+.|+.|++++.+.-.. ....+....
T Consensus 32 ~~PCTp~avi~lL~~~-~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~~~~~~~~h 108 (197)
T cd01079 32 ILPCTPLAIVKILEFL-GIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--FTRGESIRH 108 (197)
T ss_pred ccCCCHHHHHHHHHHh-CCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--ccccccccc
Confidence 4566666665555433 22 4699999999999999999999999999999886443221 111010000
Q ss_pred EeCCCCcHHHHHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 189 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
......+....+.+... ..|+||-++|...+.---++++++..++.+|...
T Consensus 109 s~t~~~~~~~~l~~~~~--~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~~ 159 (197)
T cd01079 109 EKHHVTDEEAMTLDCLS--QSDVVITGVPSPNYKVPTELLKDGAICINFASIK 159 (197)
T ss_pred ccccccchhhHHHHHhh--hCCEEEEccCCCCCccCHHHcCCCcEEEEcCCCc
Confidence 00000121112333332 3899999999876533357899999999998754
No 454
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.51 E-value=0.016 Score=52.11 Aligned_cols=70 Identities=27% Similarity=0.349 Sum_probs=48.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hH----HHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KL----AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
.+++++|+|+ |.+|+.+++.+...|++|++++++.. .+ +.+.+.+.... ..+..+ +.. .++|+||
T Consensus 4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~-~~~~~~------~~~--~~~d~vv 73 (450)
T PRK14106 4 KGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELV-LGEYPE------EFL--EGVDLVV 73 (450)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEE-eCCcch------hHh--hcCCEEE
Confidence 4789999998 66999999999999999999998742 22 33444554432 222221 111 2489999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
.++|.
T Consensus 74 ~~~g~ 78 (450)
T PRK14106 74 VSPGV 78 (450)
T ss_pred ECCCC
Confidence 99985
No 455
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.51 E-value=0.011 Score=52.95 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=48.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh----HHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
.+++++|+|+ |++|+++++.+++.|++|++.+++... .+.+.+.|.......+..+ +. ..++|+||.
T Consensus 4 ~~k~v~v~G~-g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~~----~~~~d~vV~ 74 (447)
T PRK02472 4 QNKKVLVLGL-AKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLE----LL----DEDFDLMVK 74 (447)
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHH----Hh----cCcCCEEEE
Confidence 4788999998 569999999999999999999865432 2344555654432222211 11 114899999
Q ss_pred CCCh
Q 024011 215 CMGA 218 (274)
Q Consensus 215 ~~g~ 218 (274)
+.|.
T Consensus 75 s~gi 78 (447)
T PRK02472 75 NPGI 78 (447)
T ss_pred CCCC
Confidence 9875
No 456
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.50 E-value=0.094 Score=45.02 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=66.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHH-HHcCC-eEEEEecChhhHHHHHH-----cCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMG-KCQGV-RVFVTAGSEEKLAVCKD-----LGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~-~~~g~-~v~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
+..++++|+|+ |+.+...+..+ ...++ +|.+++|++++.+.+.+ ++..... . .+..+.+ ...|
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~-~--~~~~~~~------~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYV-V--NSADEAI------EEAD 194 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEE-e--CCHHHHH------hcCC
Confidence 45688999997 99998777654 44566 88888999888755432 2332211 1 2222222 2389
Q ss_pred EEEECCChhhHHHhhhccccCCEEEEEecCCCCccccch
Q 024011 211 VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI 249 (274)
Q Consensus 211 ~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~ 249 (274)
+|+.+.......-. ++++++-.++.+|.....+.+++.
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCCH
Confidence 99999986543333 888998899999987654555555
No 457
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.50 E-value=0.027 Score=46.97 Aligned_cols=91 Identities=12% Similarity=0.200 Sum_probs=58.7
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 136 ~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
+...+++++|.|+ ||.+.+++..++..|+ +++++.|+.++.+.+.+ ++.. +.+.+ ....+|+||
T Consensus 118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~---------~~~~~----~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE---------WRPDL----GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc---------chhhc----ccccCCEEE
Confidence 3445678999997 9999999999999998 69999999988776643 3211 00111 112489999
Q ss_pred ECCChhhH--------HHhhhccccCCEEEEEecC
Q 024011 214 DCMGASYF--------QRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 214 ~~~g~~~~--------~~~~~~l~~~g~~v~~g~~ 240 (274)
|+...... +-....+++...++++-..
T Consensus 184 NaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~ 218 (272)
T PRK12550 184 NVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVAL 218 (272)
T ss_pred ECCccccCCCCccccCCCCHHHcCCCCEEEEeecC
Confidence 98752110 1112345666666666543
No 458
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=96.50 E-value=0.013 Score=49.80 Aligned_cols=74 Identities=16% Similarity=0.230 Sum_probs=45.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhh-HHHHHHc---CCCEEE--eCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDL---GADVCI--NYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~---g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
++||+|++|.+|..+++.+.+.|.+|+++++.... .+.+... +.-..+ |..+.+. +.+.....++|+||++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDREL---LDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHH---HHHHHHhCCCcEEEEC
Confidence 47999999999999999999999999887653322 1112111 111122 3333222 2222222359999999
Q ss_pred CCh
Q 024011 216 MGA 218 (274)
Q Consensus 216 ~g~ 218 (274)
+|.
T Consensus 78 ag~ 80 (328)
T TIGR01179 78 AGL 80 (328)
T ss_pred ccc
Confidence 974
No 459
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.49 E-value=0.044 Score=46.09 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=65.3
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||........|....---.|+++.+.|.++-+|.-++.++.+.|++|++..+.... ..
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~-------------------l~- 197 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD-------------------AK- 197 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC-------------------HH-
Confidence 4556655555555444333469999999997899999999999999999998654321 11
Q ss_pred HHHHHhCCCCccEEEECCChhh-HHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.. +..|+||-++|... +.. .+++++..++.+|...
T Consensus 198 ---e~~--~~ADIVIsavg~~~~v~~--~~ik~GaiVIDvgin~ 234 (301)
T PRK14194 198 ---ALC--RQADIVVAAVGRPRLIDA--DWLKPGAVVIDVGINR 234 (301)
T ss_pred ---HHH--hcCCEEEEecCChhcccH--hhccCCcEEEEecccc
Confidence 111 12688888888654 222 2378888888887543
No 460
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.48 E-value=0.057 Score=46.13 Aligned_cols=99 Identities=25% Similarity=0.201 Sum_probs=66.7
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHH----HcCCCEEEeCCCCcHHHHHHHHhCC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGG 206 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (274)
+...++++++||..|+ |.|..++.+++..+. +|+.++.+++.++.++ +.+.+.+.... .+..+... ..
T Consensus 74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-gD~~~~~~---~~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-GDGYYGVP---EF 147 (322)
T ss_pred HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CChhhccc---cc
Confidence 4456788999999996 469999998887764 6999999988765554 35554332211 12211111 11
Q ss_pred CCccEEEECCChhh-HHHhhhccccCCEEEEE
Q 024011 207 KGVDVILDCMGASY-FQRNLGSLNIDGRLFII 237 (274)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~ 237 (274)
..+|+|+.+.+... ....++.++++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 35999999887644 45667889999998874
No 461
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.46 E-value=0.0071 Score=50.90 Aligned_cols=60 Identities=25% Similarity=0.363 Sum_probs=38.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++||+|++|-+|.++.+.++..|.+++.+.|+ -+|..+.+....+.+ ...+|+||+|++.
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------~~dl~d~~~~~~~~~---~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS--------------DLDLTDPEAVAKLLE---AFKPDVVINCAAY 61 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------CS-TTSHHHHHHHHH---HH--SEEEE----
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------hcCCCCHHHHHHHHH---HhCCCeEecccee
Confidence 69999999999999999999999999998766 122222222222222 2237999999874
No 462
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.44 E-value=0.015 Score=46.50 Aligned_cols=97 Identities=23% Similarity=0.231 Sum_probs=61.2
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHH----HcCCCEE--EeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~ 204 (274)
+...+++|+++|-.|+ |.|+.++-+++..|. +|+.+++.++-.+.++ .++.+.+ ...+... -+.
T Consensus 66 ~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~------g~~ 137 (209)
T PF01135_consen 66 EALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSE------GWP 137 (209)
T ss_dssp HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGG------TTG
T ss_pred HHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhh------ccc
Confidence 5667999999999996 456777777766554 7888898887655544 4454322 2222110 011
Q ss_pred CCCCccEEEECCChhhH-HHhhhccccCCEEEEE
Q 024011 205 GGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII 237 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~ 237 (274)
....||.++-+++.... ...++.|+++|+++..
T Consensus 138 ~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 138 EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 12459999998887553 5667899999999985
No 463
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.40 E-value=0.04 Score=52.14 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=47.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecCh--hhHHHHHHc--CC-CEEE--eCCCCcHHHHHHHHhCCCCc
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSE--EKLAVCKDL--GA-DVCI--NYKTEDFVARVKEETGGKGV 209 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~--~~~~~~~~~--g~-~~~~--~~~~~~~~~~~~~~~~~~~~ 209 (274)
.+++|||+||+|.+|..+++.+.+. +.+|+++++.. +....+... .. -..+ |..+.+. +.+.....++
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~---~~~~~~~~~~ 81 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADL---VNYLLITEGI 81 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHH---HHHHHhhcCC
Confidence 4689999999999999999999877 67899888642 222222211 11 1122 3233222 2222222469
Q ss_pred cEEEECCCh
Q 024011 210 DVILDCMGA 218 (274)
Q Consensus 210 d~vi~~~g~ 218 (274)
|+||++++.
T Consensus 82 D~ViHlAa~ 90 (668)
T PLN02260 82 DTIMHFAAQ 90 (668)
T ss_pred CEEEECCCc
Confidence 999999984
No 464
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.38 E-value=0.037 Score=46.57 Aligned_cols=36 Identities=19% Similarity=0.364 Sum_probs=30.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE 175 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~ 175 (274)
.+++++|.|+ ||.+.+++..+...|+ +++++.|+++
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 5789999997 8889998888888897 8999999853
No 465
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.37 E-value=0.019 Score=49.27 Aligned_cols=93 Identities=16% Similarity=0.177 Sum_probs=61.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHH-cCC-eEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
-.+++++|+||+|.+|..+++.+.. .|. +++++.|+.+++..+. +++...+ . .+.+... ..|+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-----~----~l~~~l~--~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-----L----SLEEALP--EADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-----H----hHHHHHc--cCCEEEE
Confidence 3578999999999999999999975 464 8999999888776654 3321111 1 1223333 3899999
Q ss_pred CCChhhH-HHhhhccccCCEEEEEecCC
Q 024011 215 CMGASYF-QRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 215 ~~g~~~~-~~~~~~l~~~g~~v~~g~~~ 241 (274)
+++.... ....+.+++.-.+++++.+.
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCCC
Confidence 9986331 12224456666777777664
No 466
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.042 Score=42.70 Aligned_cols=78 Identities=22% Similarity=0.181 Sum_probs=48.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH-cC--CC-EE--EeCCCCcHHHHHH-HHh-CCCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG--AD-VC--INYKTEDFVARVK-EET-GGKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g--~~-~~--~~~~~~~~~~~~~-~~~-~~~~~d~vi 213 (274)
+++|+|++ ++|..+++.+.+.|++|++.+|+.++.+.+.. ++ .. .. .|..+.+....+. ... ..+++|.+|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999996 56666888888899999999998877665543 32 11 11 2454433332222 221 123589999
Q ss_pred ECCChhh
Q 024011 214 DCMGASY 220 (274)
Q Consensus 214 ~~~g~~~ 220 (274)
+.+-...
T Consensus 81 ~~vh~~~ 87 (177)
T PRK08309 81 AWIHSSA 87 (177)
T ss_pred Eeccccc
Confidence 8775443
No 467
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.35 E-value=0.0071 Score=45.56 Aligned_cols=90 Identities=16% Similarity=0.177 Sum_probs=57.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeC-------C-CCcHHHHHHHHhCCCCccEEEE
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-------K-TEDFVARVKEETGGKGVDVILD 214 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-------~-~~~~~~~~~~~~~~~~~d~vi~ 214 (274)
|+|.|+ |++|...+..+++.|.+|.++.|++ +.+.+++.|....... . ..... .. ....+|+||-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~D~viv 73 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SA--DAGPYDLVIV 73 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GH--HHSTESEEEE
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hh--ccCCCcEEEE
Confidence 578997 9999999999999999999999988 7777765443221111 0 00000 01 1245999999
Q ss_pred CCChhhHHHhh----hccccCCEEEEEec
Q 024011 215 CMGASYFQRNL----GSLNIDGRLFIIGT 239 (274)
Q Consensus 215 ~~g~~~~~~~~----~~l~~~g~~v~~g~ 239 (274)
|+-......++ ..+.+...++.+..
T Consensus 74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 74 AVKAYQLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp -SSGGGHHHHHHHHCTGEETTEEEEEESS
T ss_pred EecccchHHHHHHHhhccCCCcEEEEEeC
Confidence 99775544443 44555656666644
No 468
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=96.34 E-value=0.012 Score=49.74 Aligned_cols=63 Identities=16% Similarity=0.199 Sum_probs=42.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+|||+|++|-+|..+++.+...| +|+++++.... ...|..+. +.+.+...+.++|+||++++.
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~----------~~~Dl~d~---~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHSTD----------YCGDFSNP---EGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEecccccc----------ccCCCCCH---HHHHHHHHhcCCCEEEECCcc
Confidence 69999999999999999998888 78888765320 11122222 233333333458999999874
No 469
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.34 E-value=0.047 Score=44.23 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=55.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH--cCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD--LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
+.++|.|+ |.+|..+++.+.+.|.+|+++++++++.+...+ +.. +++..+..+ . ...+..+-..+|+++-+.|.
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~-~-~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATD-E-DVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCC-H-HHHHhcCCCcCCEEEEeeCC
Confidence 36789997 999999999999999999999999998876332 443 333222222 1 22333344568999999997
Q ss_pred hhHHHh
Q 024011 219 SYFQRN 224 (274)
Q Consensus 219 ~~~~~~ 224 (274)
...+..
T Consensus 77 d~~N~i 82 (225)
T COG0569 77 DEVNSV 82 (225)
T ss_pred CHHHHH
Confidence 654433
No 470
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.34 E-value=0.044 Score=46.63 Aligned_cols=89 Identities=17% Similarity=0.200 Sum_probs=60.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
++|.|.|+ |.+|.+.+..++..|. +|+++++++++.+.+++.+...... .+..+ .. ...|+||.|+..
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~----~~--~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSAAE----AV--KGADLVILCVPV 76 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHH----Hh--cCCCEEEECCCH
Confidence 57999996 9999999999998885 8999999998888887776422111 11111 11 248999999886
Q ss_pred hhH----HHhhhccccCCEEEEEec
Q 024011 219 SYF----QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~~----~~~~~~l~~~g~~v~~g~ 239 (274)
... ......++++..+++++.
T Consensus 77 ~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 433 233344566666666554
No 471
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.32 E-value=0.078 Score=40.57 Aligned_cols=44 Identities=23% Similarity=0.132 Sum_probs=37.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCC
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 185 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~ 185 (274)
.+|.+.|. |.+|..+++-+.+.|++|++.+|++++.+.+.+.+.
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~ 45 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGA 45 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTE
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhh
Confidence 36888996 999999999999999999999999999988887763
No 472
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.28 E-value=0.04 Score=43.93 Aligned_cols=98 Identities=19% Similarity=0.080 Sum_probs=63.8
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CeEEEEecChhhHHHHH----HcCCC---EEEeCCCCcHHHHHHHH
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGAD---VCINYKTEDFVARVKEE 203 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~~ 203 (274)
+...+++++++|-.|+ |.|..++.+++..+ .+|+.++.+++..+.++ ..+.. .+...+..+. +
T Consensus 66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~---~--- 137 (205)
T PRK13944 66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRG---L--- 137 (205)
T ss_pred HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccC---C---
Confidence 4556788999999986 55777777776653 58999999988766554 33322 2222222111 1
Q ss_pred hCCCCccEEEECCChh-hHHHhhhccccCCEEEEEe
Q 024011 204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g 238 (274)
.....+|.|+-+.... ..+...+.|+++|+++..-
T Consensus 138 ~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 138 EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 1123599998776643 3466778999999998753
No 473
>PRK09620 hypothetical protein; Provisional
Probab=96.25 E-value=0.016 Score=46.97 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=49.9
Q ss_pred CCCEEEEecCC----------------chHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHH
Q 024011 139 PGESFLVHGGS----------------SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 202 (274)
Q Consensus 139 ~g~~vlI~Ga~----------------g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 202 (274)
.|++|||+++. |-+|..+++.+...|++|++++............+.....-....+..+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 47888898765 89999999999999999998875322110000001111111111233445555
Q ss_pred HhCCCCccEEEECCChhh
Q 024011 203 ETGGKGVDVILDCMGASY 220 (274)
Q Consensus 203 ~~~~~~~d~vi~~~g~~~ 220 (274)
.....++|+||.++....
T Consensus 82 ~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 82 IITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HhcccCCCEEEECccccc
Confidence 554446899999887543
No 474
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.20 E-value=0.014 Score=46.89 Aligned_cols=97 Identities=21% Similarity=0.119 Sum_probs=62.7
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--eEEEEecChhhHHHHH----HcCCCEE--EeCCCCcHHHHHHHHh
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVARVKEET 204 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~ 204 (274)
+...+++++++|-.|+ |.|..+..+++..+. +|+.++.+++..+.++ +.+.+.+ ...+..+ . ..
T Consensus 71 ~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~---~---~~ 142 (215)
T TIGR00080 71 ELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQ---G---WE 142 (215)
T ss_pred HHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCccc---C---Cc
Confidence 4556889999999986 567777777777654 6999999988776654 3443222 2112111 0 11
Q ss_pred CCCCccEEEECCChh-hHHHhhhccccCCEEEEE
Q 024011 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII 237 (274)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~ 237 (274)
....||.|+-+.... ......+.|+++|+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 123599888655433 345677899999998865
No 475
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.20 E-value=0.063 Score=43.29 Aligned_cols=95 Identities=22% Similarity=0.238 Sum_probs=60.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEE--EeCCCCcHHHHHHHHhCCCCccEEEEC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDC 215 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (274)
-+|.+||=.|++|| .+ .+-+.+.|++|+.++.+++.++.++.-....- +++... ..+++... ++.||+|+..
T Consensus 58 l~g~~vLDvGCGgG--~L-se~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~-~~edl~~~--~~~FDvV~cm 131 (243)
T COG2227 58 LPGLRVLDVGCGGG--IL-SEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQA-TVEDLASA--GGQFDVVTCM 131 (243)
T ss_pred CCCCeEEEecCCcc--Hh-hHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhh-hHHHHHhc--CCCccEEEEh
Confidence 47889999998664 44 45555678999999999998888763222111 233322 23333322 2469999864
Q ss_pred CC-----h--hhHHHhhhccccCCEEEEEe
Q 024011 216 MG-----A--SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 216 ~g-----~--~~~~~~~~~l~~~g~~v~~g 238 (274)
-= . ..+..+.++++|+|.+++.-
T Consensus 132 EVlEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 132 EVLEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred hHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 22 1 13566888999999887653
No 476
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.18 E-value=0.23 Score=35.37 Aligned_cols=92 Identities=18% Similarity=0.142 Sum_probs=61.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCChhhH-
Q 024011 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF- 221 (274)
Q Consensus 143 vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~- 221 (274)
++|.|. |.+|..+++.+++.+.++++++++++..+.+++.+.. ++..+..+. +.+.+ .+-..++.++-+.+....
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~-~~l~~-a~i~~a~~vv~~~~~d~~n 76 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDP-EVLER-AGIEKADAVVILTDDDEEN 76 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSH-HHHHH-TTGGCESEEEEESSSHHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhh-hHHhh-cCccccCEEEEccCCHHHH
Confidence 578896 8999999999999777999999999999999888844 444443332 12222 223458888888776432
Q ss_pred ---HHhhhccccCCEEEEEe
Q 024011 222 ---QRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 222 ---~~~~~~l~~~g~~v~~g 238 (274)
-..++.+.+..+++...
T Consensus 77 ~~~~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 77 LLIALLARELNPDIRIIARV 96 (116)
T ss_dssp HHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHHCCCCeEEEEE
Confidence 22334455566666554
No 477
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.17 E-value=0.075 Score=44.20 Aligned_cols=97 Identities=15% Similarity=0.176 Sum_probs=67.8
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+....|+...---.|++++|.|.+.-+|.=++.++.+.++.|++..+... ++.+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~-------------------~l~~ 197 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK-------------------NLKE 197 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC-------------------CHHH
Confidence 345555555555544332346999999999999999999999999999987763211 2211
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+ ..|+||-++|...+ ---++++++..++.+|...
T Consensus 198 ~~~------~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 198 VCK------KADILVVAIGRPKF-IDEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHh------hCCEEEEcCCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 121 27999999997654 2246789999999998654
No 478
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.15 E-value=0.1 Score=43.46 Aligned_cols=97 Identities=10% Similarity=0.136 Sum_probs=67.5
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||...+....|....---.|++++|.|.+.-+|.=++.++...++.|++...... +..+
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~-------------------~l~~ 195 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTR-------------------NLKQ 195 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCC-------------------CHHH
Confidence 345555555555544332346999999999999999999999999999887643211 1222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+ ..|+||-++|.+.+ ---++++++..++.+|...
T Consensus 196 ~~~------~ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 196 LTK------EADILVVAVGVPHF-IGADAVKPGAVVIDVGISR 231 (282)
T ss_pred HHh------hCCEEEEccCCcCc-cCHHHcCCCcEEEEeeccc
Confidence 221 27999999997654 2246888999999998764
No 479
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=96.13 E-value=0.032 Score=48.23 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=44.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCe-EEEEecCh--hhHHHHHHcC--CC-EEE--eCCCCcHHHHHHHHhCCCCccEEE
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE--EKLAVCKDLG--AD-VCI--NYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g~~-v~~~~~~~--~~~~~~~~~g--~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
++||+|++|.+|..++..+...|.+ ++.+++.. ...+.+..+. .. ..+ |..+. +.+.+.....++|+||
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDR---AELDRIFAQHQPDAVM 78 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCH---HHHHHHHHhcCCCEEE
Confidence 5899999999999999999999875 54444422 1223333322 11 122 33332 2233333223589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
++++.
T Consensus 79 h~A~~ 83 (352)
T PRK10084 79 HLAAE 83 (352)
T ss_pred ECCcc
Confidence 99974
No 480
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.12 E-value=0.083 Score=42.60 Aligned_cols=100 Identities=14% Similarity=0.193 Sum_probs=56.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecChh-------hH-HH---------------HHHcCCCEEEeCCCCc
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE-------KL-AV---------------CKDLGADVCINYKTED 195 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~~~-------~~-~~---------------~~~~g~~~~~~~~~~~ 195 (274)
..+|+|.|. ||+|..++..+.+.|+ ++.+++.+.- ++ .. .+++.+.--++..+.-
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 466889997 9999999999999998 7777764311 11 11 1122221111111111
Q ss_pred H-HHHHHHHhCCCCccEEEECCChhh--HHHhhhccccCCEEEEEecCC
Q 024011 196 F-VARVKEETGGKGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 196 ~-~~~~~~~~~~~~~d~vi~~~g~~~--~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+ .+.+.+.+. .++|+|||+.-.-. ...+..+.+.+-.++..+..+
T Consensus 109 ~t~en~~~~~~-~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLS-KGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhc-CCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 1 222333343 37999999987633 223333455555666665544
No 481
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.11 E-value=0.1 Score=43.53 Aligned_cols=97 Identities=12% Similarity=0.118 Sum_probs=66.9
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+....|....---.|++++|.|.+.-+|.-++.++.+.++.|++..... .+..+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t-------------------~~l~~ 197 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT-------------------KNLAE 197 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc-------------------hhHHH
Confidence 34555555555554332234699999999999999999999999999998765321 11111
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.++ ..|+||-++|...+ -.-++++++..++.+|...
T Consensus 198 ~~~------~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 198 LTK------QADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHH------hCCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence 221 27999999987653 2246778888999998764
No 482
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=96.10 E-value=0.016 Score=51.89 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=32.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecC
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~ 173 (274)
+++.+|+|+|++|-+|..+++.+...|.+|+++++.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456889999999999999999999999999999875
No 483
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.09 E-value=0.064 Score=42.67 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=29.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-eEEEEecC
Q 024011 140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS 173 (274)
Q Consensus 140 g~~vlI~Ga~g~iG~~~~~~~~~~g~-~v~~~~~~ 173 (274)
+.+|+|.|+ |++|..+++.+.+.|. ++.+++.+
T Consensus 21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 467999997 9999999999999998 88888865
No 484
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.09 E-value=0.11 Score=42.36 Aligned_cols=106 Identities=15% Similarity=0.114 Sum_probs=67.1
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCeEEEEecChhhHHHHH----HcCCCEEEeCCCCcHHHHHHHHhC-
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETG- 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~- 205 (274)
...+..+.+++|-.|. +.|..+..+++.. +.+++.++.+++..+.++ +.|...-+.....+..+.+.+...
T Consensus 62 ~l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~ 139 (234)
T PLN02781 62 MLVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNN 139 (234)
T ss_pred HHHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhC
Confidence 3455667889999985 5677666666654 359999999988776665 344332222222333333333321
Q ss_pred --CCCccEEEECCCh----hhHHHhhhccccCCEEEEEecC
Q 024011 206 --GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 206 --~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~ 240 (274)
...||+||-.+.. ..++.+++.++++|.++.-+..
T Consensus 140 ~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn~l 180 (234)
T PLN02781 140 DPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDNTL 180 (234)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 2469999866542 2367788999999998865544
No 485
>PRK07574 formate dehydrogenase; Provisional
Probab=96.08 E-value=0.11 Score=45.65 Aligned_cols=89 Identities=18% Similarity=0.126 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCCh
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (274)
.|+++.|.|. |.||+.+++.++..|++|++.+++....+..+..+.... .++ .+... ..|+|+.+...
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~-----~~l----~ell~--~aDvV~l~lPl 258 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH-----VSF----DSLVS--VCDVVTIHCPL 258 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec-----CCH----HHHhh--cCCEEEEcCCC
Confidence 4789999996 999999999999999999999987533333333332110 111 11121 25777666653
Q ss_pred hh-----H-HHhhhccccCCEEEEEec
Q 024011 219 SY-----F-QRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 219 ~~-----~-~~~~~~l~~~g~~v~~g~ 239 (274)
.. + ...+..|+++..+|.++.
T Consensus 259 t~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 259 HPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred CHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 11 1 234556666665555543
No 486
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.08 E-value=0.09 Score=44.68 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=66.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHH-cCC-eEEEEecChhhHHHHH-HcC---CCEEEeCCCCcHHHHHHHHhCCCCccE
Q 024011 138 SPGESFLVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVCK-DLG---ADVCINYKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 138 ~~g~~vlI~Ga~g~iG~~~~~~~~~-~g~-~v~~~~~~~~~~~~~~-~~g---~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (274)
...++++|+|+ |..|.+.++.+.. .+. ++.+..|+.++.+.+. ++. .... ..+..+.+ ...|+
T Consensus 123 ~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~----~~~~~~av------~~aDi 191 (304)
T PRK07340 123 APPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE----PLDGEAIP------EAVDL 191 (304)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE----ECCHHHHh------hcCCE
Confidence 45688999996 9999998888864 565 7999999988765543 332 2211 12232222 24899
Q ss_pred EEECCChhh--HHHhhhccccCCEEEEEecCCCCccccchh
Q 024011 212 ILDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250 (274)
Q Consensus 212 vi~~~g~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 250 (274)
|+.+..+.. +.. .++++-.++.+|.....+.+++..
T Consensus 192 VitaT~s~~Pl~~~---~~~~g~hi~~iGs~~p~~~El~~~ 229 (304)
T PRK07340 192 VVTATTSRTPVYPE---AARAGRLVVAVGAFTPDMAELAPR 229 (304)
T ss_pred EEEccCCCCceeCc---cCCCCCEEEecCCCCCCcccCCHH
Confidence 999987643 332 378888999999876555566644
No 487
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=96.07 E-value=0.037 Score=47.81 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=30.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcC--CeEEEEecChh
Q 024011 142 SFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEE 175 (274)
Q Consensus 142 ~vlI~Ga~g~iG~~~~~~~~~~g--~~v~~~~~~~~ 175 (274)
+|+|+|++|.+|..+++.+.+.| .+|+++.|+.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 48999999999999999999888 78999998765
No 488
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.06 E-value=0.083 Score=44.04 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=68.3
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||........+....---.|++++|.|.+.-+|.-++.++.+.++.|++...... +..+
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~-------------------~l~~ 198 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQ-------------------NLPS 198 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC-------------------CHHH
Confidence 355555555555544333346999999999999999999999999999987763221 2221
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
.. +..|+||-++|...+- .-++++++..++++|...
T Consensus 199 ~~------~~ADIvIsAvGk~~~i-~~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 199 IV------RQADIIVGAVGKPEFI-KADWISEGAVLLDAGYNP 234 (284)
T ss_pred HH------hhCCEEEEeCCCcCcc-CHHHcCCCCEEEEecCcc
Confidence 22 1279999999976542 257889999999998754
No 489
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=96.05 E-value=0.084 Score=43.94 Aligned_cols=77 Identities=18% Similarity=0.075 Sum_probs=43.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--eEEEEec-----ChhhHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEE
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAG-----SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~g~--~v~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (274)
+++||+|+.|-||...+........ +|++++. +.+.+..+.....-..+..+-.+ .+.+.+......+|+|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D-~~~v~~~~~~~~~D~Vv 79 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICD-RELVDRLFKEYQPDAVV 79 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccC-HHHHHHHHHhcCCCeEE
Confidence 3689999999999999988876654 5677663 22223222222222222222222 23333333333589999
Q ss_pred ECCCh
Q 024011 214 DCMGA 218 (274)
Q Consensus 214 ~~~g~ 218 (274)
+.+..
T Consensus 80 hfAAE 84 (340)
T COG1088 80 HFAAE 84 (340)
T ss_pred Eechh
Confidence 87764
No 490
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.04 E-value=0.12 Score=43.15 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=67.4
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||...+....|....---.|++++|.|.+.-+|.=++.++.+.++.|++..... .++.+
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T-------------------~~l~~ 196 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT-------------------KDLPQ 196 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------------CCHHH
Confidence 35566555555554333234699999999999999999999999999998765321 12222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+ ..|+||-++|...+ ---++++++..++.+|...
T Consensus 197 ~~~------~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 197 VAK------EADILVVATGLAKF-VKKDYIKPGAIVIDVGMDR 232 (284)
T ss_pred HHh------hCCEEEEecCCcCc-cCHHHcCCCCEEEEccCcc
Confidence 222 27999999997654 2246788988999998764
No 491
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.03 E-value=0.1 Score=43.46 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=66.6
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..|+........+....---.|++++|.|.+.-+|.-++.++...|++|.+..++...
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~---------------------- 188 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTEN---------------------- 188 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhH----------------------
Confidence 3455555555555443323469999999998899999999999999999887754321
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
+.+.+. ..|+||.++|...+ -.-++++++..++++|...
T Consensus 189 -L~~~~~--~ADIvI~Avgk~~l-v~~~~vk~GavVIDVgi~~ 227 (279)
T PRK14178 189 -LKAELR--QADILVSAAGKAGF-ITPDMVKPGATVIDVGINQ 227 (279)
T ss_pred -HHHHHh--hCCEEEECCCcccc-cCHHHcCCCcEEEEeeccc
Confidence 122221 27999999985532 1234578999999998763
No 492
>PLN02928 oxidoreductase family protein
Probab=96.02 E-value=0.13 Score=44.65 Aligned_cols=93 Identities=22% Similarity=0.206 Sum_probs=56.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcC----C-CEEEe--CCCCcHHHHHHHHhCCCCccE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG----A-DVCIN--YKTEDFVARVKEETGGKGVDV 211 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g----~-~~~~~--~~~~~~~~~~~~~~~~~~~d~ 211 (274)
.|+++.|.|. |.+|..+++.++..|++|++.+++...... ..++ . ....+ ....++ .+.... .|+
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L----~ell~~--aDi 229 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDI----YEFAGE--ADI 229 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhh-hhhccccccccccccccCcccCH----HHHHhh--CCE
Confidence 4799999996 999999999999999999999886332111 1100 0 00000 011122 222222 688
Q ss_pred EEECCChhh------HHHhhhccccCCEEEEEec
Q 024011 212 ILDCMGASY------FQRNLGSLNIDGRLFIIGT 239 (274)
Q Consensus 212 vi~~~g~~~------~~~~~~~l~~~g~~v~~g~ 239 (274)
|+.+..... -...+..|+++..+|.++.
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 888765321 2456777888777777764
No 493
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.02 E-value=0.15 Score=36.48 Aligned_cols=99 Identities=17% Similarity=0.271 Sum_probs=64.5
Q ss_pred hhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CeEEEEecChhhHHHHH----HcCCC--EEEeCCCCcHHHHHHHHhC
Q 024011 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK----DLGAD--VCINYKTEDFVARVKEETG 205 (274)
Q Consensus 133 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g-~~v~~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~~~~~ 205 (274)
....++++++++-.|+ |.|..+..+++..+ .+++.++.++..++.++ ..+.. .....+.... ....
T Consensus 13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA---LEDS-- 85 (124)
T ss_pred HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc---Chhh--
Confidence 3445677889999986 44888899888764 69999999988776654 23322 2222221111 1111
Q ss_pred CCCccEEEECCCh----hhHHHhhhccccCCEEEEEe
Q 024011 206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~g 238 (274)
...+|+|+...+. ..+..+.+.|+++|+++...
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 1359999876543 23677888999999998764
No 494
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.00 E-value=0.026 Score=44.70 Aligned_cols=96 Identities=16% Similarity=0.086 Sum_probs=58.2
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHH----cCCCEEEeCCCCcHHHHHHHHhCCCCcc
Q 024011 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVD 210 (274)
Q Consensus 135 ~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (274)
....++.++|-.|+ |.|..+..++++ |++|++++.+++.++.+++ .+... +.....++. +..-...+|
T Consensus 26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~d~~----~~~~~~~fD 97 (197)
T PRK11207 26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVVDLN----NLTFDGEYD 97 (197)
T ss_pred cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEecChh----hCCcCCCcC
Confidence 34556788999986 457777777764 8999999999887766553 22211 111111111 111123499
Q ss_pred EEEECCCh---------hhHHHhhhccccCCEEEEEe
Q 024011 211 VILDCMGA---------SYFQRNLGSLNIDGRLFIIG 238 (274)
Q Consensus 211 ~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g 238 (274)
+|+.+..- ..+....+.|+++|.++.+.
T Consensus 98 ~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 98 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred EEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 99876442 12456677899999965543
No 495
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.00 E-value=0.11 Score=41.80 Aligned_cols=115 Identities=12% Similarity=0.025 Sum_probs=67.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChh-hHHHHHHcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
++++|||.|+ |.++.-=++.+...|++|.+++..-. .++.+.+.+.-.... . .+... + . .++++||-+++
T Consensus 24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~-r--~~~~~--d-l--~g~~LViaATd 94 (223)
T PRK05562 24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIK-G--NYDKE--F-I--KDKHLIVIATD 94 (223)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-C--CCChH--H-h--CCCcEEEECCC
Confidence 4789999997 88998888888889999999875432 333333333222221 1 11111 1 1 35899999998
Q ss_pred hhhHHHhhhccc-cCCEEEEEecCCCCccccchhhHhhcc-eEEEEee
Q 024011 218 ASYFQRNLGSLN-IDGRLFIIGTQGGAKTELNITSLFAKR-LTVQGIV 263 (274)
Q Consensus 218 ~~~~~~~~~~l~-~~g~~v~~g~~~~~~~~~~~~~~~~~~-~~i~g~~ 263 (274)
...++..+...+ ..+.++.+..... ...+-...++.++ ++|.-+.
T Consensus 95 D~~vN~~I~~~a~~~~~lvn~vd~p~-~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 95 DEKLNNKIRKHCDRLYKLYIDCSDYK-KGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred CHHHHHHHHHHHHHcCCeEEEcCCcc-cCeEEeeeEEecCCEEEEEEC
Confidence 877666655544 4455555543322 2345455555554 4444333
No 496
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.98 E-value=0.03 Score=51.28 Aligned_cols=93 Identities=16% Similarity=0.191 Sum_probs=59.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHH-HcCCCEEEeCCCCcHHHHHHHHhCCCCccEEEECCC
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (274)
.+++++|+|+ ||+|.+++..+...|++|+++.|+.++.+.+. +++.. .+.. +...+.. ....|+++|+++
T Consensus 378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~------~~~~~~~-~~~~diiINtT~ 448 (529)
T PLN02520 378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTL------ADLENFH-PEEGMILANTTS 448 (529)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeH------hHhhhhc-cccCeEEEeccc
Confidence 4689999998 89999999999999999999999888776654 34322 1111 1111111 123789998875
Q ss_pred hhh---H---HHhhhccccCCEEEEEecC
Q 024011 218 ASY---F---QRNLGSLNIDGRLFIIGTQ 240 (274)
Q Consensus 218 ~~~---~---~~~~~~l~~~g~~v~~g~~ 240 (274)
... . +-....+++...++++-..
T Consensus 449 vGm~~~~~~~pl~~~~l~~~~~v~D~vY~ 477 (529)
T PLN02520 449 VGMQPNVDETPISKHALKHYSLVFDAVYT 477 (529)
T ss_pred CCCCCCCCCCcccHhhCCCCCEEEEeccC
Confidence 321 1 1123446666677776543
No 497
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.98 E-value=0.11 Score=43.33 Aligned_cols=97 Identities=14% Similarity=0.113 Sum_probs=66.5
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
..||...+....|....---.|++++|.|.+.-+|.=++.++.+.++.|++..+... +..+
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~-------------------~l~~ 194 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQ-------------------DLPA 194 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCC-------------------CHHH
Confidence 345555555554533322236999999999999999999999999999987653221 2222
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
..+ ..|+||-++|...+- .-++++++..++.+|...
T Consensus 195 ~~~------~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 195 VTR------RADVLVVAVGRPHLI-TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred HHh------hCCEEEEecCCcCcc-CHHHcCCCCEEEEccCcc
Confidence 222 279999999876542 356788888888888764
No 498
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.97 E-value=0.099 Score=45.47 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=60.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHc--CCeEEEEe--cChhhH-HHHHHcCCCEEEeCCCCcHHHHHH--------------
Q 024011 141 ESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTA--GSEEKL-AVCKDLGADVCINYKTEDFVARVK-------------- 201 (274)
Q Consensus 141 ~~vlI~Ga~g~iG~~~~~~~~~~--g~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-------------- 201 (274)
+++.|.|++|+||..++..+++. .++|++.+ ++.+++ +.++++++..+.-.+.. ....+.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~-~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEE-AAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHH-HHHHHHHhhccCCceEEECh
Confidence 57999999999999999998876 56777775 444444 44567888776544322 112222
Q ss_pred ----HHhCCCCccEEEECCChh-hHHHhhhccccCCEEE
Q 024011 202 ----EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLF 235 (274)
Q Consensus 202 ----~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v 235 (274)
+......+|+|+++.++. .+...+.+++.+-++.
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~Va 119 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIA 119 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEE
Confidence 222223489999988763 4566666665554433
No 499
>PLN02778 3,5-epimerase/4-reductase
Probab=95.97 E-value=0.033 Score=47.18 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=28.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCeEEEE
Q 024011 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT 170 (274)
Q Consensus 139 ~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~ 170 (274)
..+++||+|++|-+|..+++.+...|.+|+..
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEe
Confidence 34789999999999999999999999998754
No 500
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.96 E-value=0.1 Score=43.48 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=69.0
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCeEEEEecChhhHHHHHHcCCCEEEeCCCCcHHH
Q 024011 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (274)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (274)
.+||...+.+..|+...---.|++++|.|.+.-+|.=++.++.+.++.|++..+... +..+
T Consensus 137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~-------------------dl~~ 197 (282)
T PRK14180 137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT-------------------DLKS 197 (282)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC-------------------CHHH
Confidence 456665566655544433446999999999999999999999999999987753322 1111
Q ss_pred HHHHHhCCCCccEEEECCChhhHHHhhhccccCCEEEEEecCC
Q 024011 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (274)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (274)
. + +..|+||-++|.+.+- --++++++..++.+|...
T Consensus 198 ~----~--k~ADIvIsAvGkp~~i-~~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 198 H----T--TKADILIVAVGKPNFI-TADMVKEGAVVIDVGINH 233 (282)
T ss_pred H----h--hhcCEEEEccCCcCcC-CHHHcCCCcEEEEecccc
Confidence 1 1 2279999999976542 237889999999998754
Done!