BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024012
(274 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
gi|222864484|gb|EEF01615.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/276 (80%), Positives = 247/276 (89%), Gaps = 3/276 (1%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MCIYDA DTHFGFCC++DE+ S ELARLPGVL+VRPDPDYNSV+KDYS +++S N
Sbjct: 34 MCIYDACYDTHFGFCCDIDEDASLELARLPGVLSVRPDPDYNSVEKDYSS-GVKLSTLSN 92
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
QIG+ LLFP G TKHWLVR+DKPGVGVVTKAQMVD YAQILTKV+G EKDAQMCIYHVS
Sbjct: 93 PQIGSKLLFPSGNTKHWLVRIDKPGVGVVTKAQMVDYYAQILTKVMGYEKDAQMCIYHVS 152
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASP 180
WQSNFGFCCELD+ECAQEL GVPGVLSV PD++F SENKDY G++L NS P DSSEAS
Sbjct: 153 WQSNFGFCCELDEECAQELAGVPGVLSVLPDKDFESENKDYRGDSLINSANPPDSSEASQ 212
Query: 181 -TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 239
T ++TKKLF+TGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF++YTTEEA
Sbjct: 213 ITHVRTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFVKYTTEEA 272
Query: 240 ASAALKEMNGKIINGWMIVVDVAKTT-PKYSRGRPR 274
AS+ALKEMNGKIINGWMIVVDVAK+ P+YSRGRPR
Sbjct: 273 ASSALKEMNGKIINGWMIVVDVAKSNPPRYSRGRPR 308
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 70/112 (62%), Gaps = 8/112 (7%)
Query: 81 MDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELT 140
M+ P GV +K +++D Y + L + LG+E DAQMCIY + ++FGFCC++D++ + EL
Sbjct: 1 METPPKGVNSKPEIIDYYVKTLERALGSEIDAQMCIYDACYDTHFGFCCDIDEDASLELA 60
Query: 141 GVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASPTQIKTKKLFVTG 192
+PGVLSV+PD ++ S KDY +++ S QI +K LF +G
Sbjct: 61 RLPGVLSVRPDPDYNSVEKDYSSGVKLSTL--------SNPQIGSKLLFPSG 104
>gi|225464121|ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
Length = 409
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/276 (79%), Positives = 243/276 (88%), Gaps = 2/276 (0%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MCIYDAS D FGFCC++D ETSREL+ L GVL+V+PDP++NSVKKDY+ +IQ+ + N
Sbjct: 131 MCIYDASWDAPFGFCCDIDAETSRELSGLQGVLSVKPDPNFNSVKKDYTFSNIQLGSVSN 190
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
S IG+ LFP G +K+WLV+MD+P VGVVTKAQMVD YAQILTKVLGNEKDAQMCIYH+S
Sbjct: 191 SDIGSPQLFPAGNSKYWLVQMDRPTVGVVTKAQMVDFYAQILTKVLGNEKDAQMCIYHIS 250
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEAS- 179
WQS+FGFCCELD+ECA+EL GVPGVLSV+PDENF S NKDYGG +LQNS DS EA+
Sbjct: 251 WQSDFGFCCELDEECARELAGVPGVLSVRPDENFESNNKDYGGGSLQNSTDSLDSMEANQ 310
Query: 180 PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 239
PT IKTKKLFVTGLSFYTSEKTLR AFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA
Sbjct: 311 PTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 370
Query: 240 ASAALKEMNGKIINGWMIVVDVAKTTP-KYSRGRPR 274
ASAALKEMNGKIINGWMIVVDVAK TP KYSR RPR
Sbjct: 371 ASAALKEMNGKIINGWMIVVDVAKPTPQKYSRSRPR 406
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 82/122 (67%), Gaps = 7/122 (5%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HW+V+M+ P + +KA+++D Y + L VLG+EKDAQMCIY SW + FGFCC++D E
Sbjct: 92 RHWMVQMEAPPQVLRSKAEIIDYYVRTLETVLGSEKDAQMCIYDASWDAPFGFCCDIDAE 151
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASPTQIKTKKLFVTGLS 194
++EL+G+ GVLSV+PD NF S KDY +N+Q V S+S SP +LF G S
Sbjct: 152 TSRELSGLQGVLSVKPDPNFNSVKKDYTFSNIQLGSV-SNSDIGSP------QLFPAGNS 204
Query: 195 FY 196
Y
Sbjct: 205 KY 206
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/276 (79%), Positives = 243/276 (88%), Gaps = 2/276 (0%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MCIYDAS D FGFCC++D ETSREL+ L GVL+V+PDP++NSVKKDY+ +IQ+ + N
Sbjct: 37 MCIYDASWDAPFGFCCDIDAETSRELSGLQGVLSVKPDPNFNSVKKDYTFSNIQLGSVSN 96
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
S IG+ LFP G +K+WLV+MD+P VGVVTKAQMVD YAQILTKVLGNEKDAQMCIYH+S
Sbjct: 97 SDIGSPQLFPAGNSKYWLVQMDRPTVGVVTKAQMVDFYAQILTKVLGNEKDAQMCIYHIS 156
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEAS- 179
WQS+FGFCCELD+ECA+EL GVPGVLSV+PDENF S NKDYGG +LQNS DS EA+
Sbjct: 157 WQSDFGFCCELDEECARELAGVPGVLSVRPDENFESNNKDYGGGSLQNSTDSLDSMEANQ 216
Query: 180 PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 239
PT IKTKKLFVTGLSFYTSEKTLR AFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA
Sbjct: 217 PTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 276
Query: 240 ASAALKEMNGKIINGWMIVVDVAKTTP-KYSRGRPR 274
ASAALKEMNGKIINGWMIVVDVAK TP KYSR RPR
Sbjct: 277 ASAALKEMNGKIINGWMIVVDVAKPTPQKYSRSRPR 312
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 79/119 (66%), Gaps = 7/119 (5%)
Query: 78 LVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQ 137
+V+M+ P + +KA+++D Y + L VLG+EKDAQMCIY SW + FGFCC++D E ++
Sbjct: 1 MVQMEAPPQVLRSKAEIIDYYVRTLETVLGSEKDAQMCIYDASWDAPFGFCCDIDAETSR 60
Query: 138 ELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFY 196
EL+G+ GVLSV+PD NF S KDY +N+Q V S+S SP +LF G S Y
Sbjct: 61 ELSGLQGVLSVKPDPNFNSVKKDYTFSNIQLGSV-SNSDIGSP------QLFPAGNSKY 112
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis vinifera]
Length = 408
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/320 (68%), Positives = 242/320 (75%), Gaps = 46/320 (14%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MCIYDAS D FGFCC++D ETSREL+ L GVL+V+PDPD+NSVKKDY+ +IQ+ + N
Sbjct: 86 MCIYDASWDAPFGFCCDIDAETSRELSGLQGVLSVKPDPDFNSVKKDYTFSNIQLGSVSN 145
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
S IG+ LFP G +KHWLV+MD+P VGVVTKAQMVD YAQILTKVLGNEKDAQMCIYH+S
Sbjct: 146 SDIGSPQLFPAGNSKHWLVQMDRPTVGVVTKAQMVDFYAQILTKVLGNEKDAQMCIYHIS 205
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYG------------------ 162
WQS+FGFCCELD+ECA+EL GVPGVLSV+PDENF S NKDYG
Sbjct: 206 WQSDFGFCCELDEECARELAGVPGVLSVRPDENFESNNKDYGVLDIKWDDEQDSIKIRPL 265
Query: 163 --------------------------GNNLQNSMVPSDSSEAS-PTQIKTKKLFVTGLSF 195
G +LQNS DS EA+ PT IK KKLFVTGLSF
Sbjct: 266 VATVLDIADHLFYVVGMGLNKVEVVLGGSLQNSTDSLDSMEANQPTNIKXKKLFVTGLSF 325
Query: 196 YTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGW 255
YTSEKTLR AFEGFGELVEVKIIMDKISKRSKGYAFIEY+TEEAASAALKEMNGKIINGW
Sbjct: 326 YTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYSTEEAASAALKEMNGKIINGW 385
Query: 256 MIVVDVAKTTP-KYSRGRPR 274
MIVVDVAK TP KYSR RPR
Sbjct: 386 MIVVDVAKPTPQKYSRSRPR 405
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Query: 61 SQIGTTLLFPLGT---TKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIY 117
S T+L F +HW+V+M+ P + +KA+++D Y + L VLG+EKDAQMCIY
Sbjct: 30 STTSTSLAFSASAGERQRHWMVQMEAPPQVLRSKAEIIDYYVRTLETVLGSEKDAQMCIY 89
Query: 118 HVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
SW + FGFCC++D E ++EL+G+ GVLSV+PD +F S KDY +N+Q V S+S
Sbjct: 90 DASWDAPFGFCCDIDAETSRELSGLQGVLSVKPDPDFNSVKKDYTFSNIQLGSV-SNSDI 148
Query: 178 ASP 180
SP
Sbjct: 149 GSP 151
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/272 (72%), Positives = 231/272 (84%), Gaps = 1/272 (0%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MCIYDAS DT FGFCC++DE+ S ELAR+PGV++V PDP+++S++KD ++
Sbjct: 120 MCIYDASWDTRFGFCCDIDEQASIELARVPGVISVEPDPNFSSIEKDNGSSTPPLNLKSY 179
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
SQ G+ +LFPLG TKHWLVR+DKPG+GVVTKAQMVD Y +ILTKVLGN+KDAQMCIYHVS
Sbjct: 180 SQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVS 239
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSM-VPSDSSEAS 179
WQS+FGFCCELD+ECA+EL GVPGVLSVQ D NF +ENKDYGGN +N + +P S
Sbjct: 240 WQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPLDLPDSSGTHQ 299
Query: 180 PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 239
T +KTKKLF+TGLSFYTSEKTLRAAFEGFG+LVEVKIIMDKISKRSKGYAF+EYTTEEA
Sbjct: 300 TTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEA 359
Query: 240 ASAALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
ASAALKEMNGKIINGWMIVVD+AK +P+ G
Sbjct: 360 ASAALKEMNGKIINGWMIVVDIAKPSPRRYGG 391
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 67/94 (71%)
Query: 71 LGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCE 130
G +HW V M++P G+ +K Q++D Y + L +VLG+EKDAQMCIY SW + FGFCC+
Sbjct: 77 FGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQMCIYDASWDTRFGFCCD 136
Query: 131 LDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+D++ + EL VPGV+SV+PD NF S KD G +
Sbjct: 137 IDEQASIELARVPGVISVEPDPNFSSIEKDNGSS 170
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/272 (73%), Positives = 231/272 (84%), Gaps = 1/272 (0%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MCIYDAS DT FGFCC++DE+ S ELAR+PGV++V PDP+++S++KD ++
Sbjct: 120 MCIYDASWDTRFGFCCDIDEQASIELARVPGVISVEPDPNFSSIEKDNGSSTPPLNLKSY 179
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
SQ G+ +LFPLG TKHWLVR+DKPG+GVVTKAQMVD Y +ILTKVLGN+KDAQMCIYHVS
Sbjct: 180 SQNGSRVLFPLGNTKHWLVRIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVS 239
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEAS 179
WQS+FGFCCELD+ECA+EL GVPGVLSVQ D NF +ENKDYGGN +N S +P S
Sbjct: 240 WQSSFGFCCELDEECARELAGVPGVLSVQLDANFEAENKDYGGNIAKNPSDLPDSSGTHQ 299
Query: 180 PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 239
T +KTKKLF+TGLSFYTSEKTLRAAFEGFG+LVEVKIIMDKISKRSKGYAF+EYTTEEA
Sbjct: 300 TTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEA 359
Query: 240 ASAALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
ASAALKEMNGKIINGWMIVVD+AK +P+ G
Sbjct: 360 ASAALKEMNGKIINGWMIVVDIAKPSPRRYGG 391
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 67/94 (71%)
Query: 71 LGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCE 130
G +HW V M++P G+ +K Q++D Y + L +VLG+EKDAQMCIY SW + FGFCC+
Sbjct: 77 FGENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQMCIYDASWDTRFGFCCD 136
Query: 131 LDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+D++ + EL VPGV+SV+PD NF S KD G +
Sbjct: 137 IDEQASIELARVPGVISVEPDPNFSSIEKDNGSS 170
>gi|224097630|ref|XP_002311019.1| predicted protein [Populus trichocarpa]
gi|222850839|gb|EEE88386.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/253 (79%), Positives = 226/253 (89%), Gaps = 6/253 (2%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MC+YD+SCDT FGFCC++DE+ S ELARLPGV++VRPDPDYNS +KDYS L ++S N
Sbjct: 83 MCMYDSSCDTRFGFCCDIDEDASLELARLPGVISVRPDPDYNSAEKDYS-LGFRLSTLSN 141
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
QIG+ LLFP G TKHWLV++DKP VGVVTKAQMVD +AQILTKV+GNEKDAQMCIYHVS
Sbjct: 142 PQIGSNLLFPAGNTKHWLVKIDKPAVGVVTKAQMVDYHAQILTKVMGNEKDAQMCIYHVS 201
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASP 180
WQSNFGFCCELD+ECAQEL GVPGVLSVQPD+N SENKDYGG+++ NS +DSSEAS
Sbjct: 202 WQSNFGFCCELDEECAQELAGVPGVLSVQPDKNDESENKDYGGDHIINS---ADSSEASQ 258
Query: 181 TQ-IKTKKLFVT-GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEE 238
T +KTKKLF+T GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF+EYTTEE
Sbjct: 259 TTPVKTKKLFITAGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFVEYTTEE 318
Query: 239 AASAALKEMNGKI 251
AASAALKEMNGK+
Sbjct: 319 AASAALKEMNGKV 331
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 64/87 (73%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
KHW++ M+ P GV +K +++D Y + L +V+G+EKDAQMC+Y S + FGFCC++D++
Sbjct: 44 KHWMILMESPPKGVNSKPEIIDYYVKTLERVIGSEKDAQMCMYDSSCDTRFGFCCDIDED 103
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDY 161
+ EL +PGV+SV+PD ++ S KDY
Sbjct: 104 ASLELARLPGVISVRPDPDYNSAEKDY 130
>gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [Ricinus communis]
gi|223535726|gb|EEF37389.1| RNA binding protein, putative [Ricinus communis]
Length = 371
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/275 (74%), Positives = 221/275 (80%), Gaps = 31/275 (11%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
+CIYDASCDTHFGFCC++DE TS ELA LPGVL+VRPDPDYNS KKDYS ++ N N
Sbjct: 124 LCIYDASCDTHFGFCCDIDETTSLELASLPGVLSVRPDPDYNSEKKDYSP-NVGFGNLSN 182
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
QIG+T LF G T+HWLVRM+KPGVGVVTKAQMVD YA+IL KVLGN+KDAQMCIYHVS
Sbjct: 183 LQIGSTPLFLSGNTRHWLVRMNKPGVGVVTKAQMVDYYAEILAKVLGNQKDAQMCIYHVS 242
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASP 180
W+ NFGFCCELD+ECAQEL GVPGVLSVQ D+NF SENKDY
Sbjct: 243 WRPNFGFCCELDEECAQELAGVPGVLSVQLDKNFESENKDY------------------- 283
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA
Sbjct: 284 ----------EGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 333
Query: 241 SAALKEMNGKIINGWMIVVDVAKTT-PKYSRGRPR 274
+AALKEMNGKIINGWMIVVDVAKT+ P+YSRGR R
Sbjct: 334 NAALKEMNGKIINGWMIVVDVAKTSPPRYSRGRRR 368
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 16/122 (13%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HW+V M+ P GV +K +++D Y + L +VLG+EKDA++CIY S ++FGFCC++D+
Sbjct: 85 RHWMVLMESPSQGVNSKPEIIDYYVKTLARVLGSEKDAELCIYDASCDTHFGFCCDIDET 144
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGN----NLQNSMVPSDSSEASPTQIKTKKLFV 190
+ EL +PGVLSV+PD ++ SE KDY N NL N QI + LF+
Sbjct: 145 TSLELASLPGVLSVRPDPDYNSEKKDYSPNVGFGNLSN------------LQIGSTPLFL 192
Query: 191 TG 192
+G
Sbjct: 193 SG 194
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/274 (73%), Positives = 227/274 (82%), Gaps = 6/274 (2%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MCIYDAS +THFGFCC++DEE S +LA LP VL VRPD ++NS+KKDYS + +
Sbjct: 115 MCIYDASWNTHFGFCCDIDEEISAQLASLPEVLLVRPDLEFNSLKKDYSLSSGEAGHLSG 174
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
+ T +LFP G +KHWLV+MDKPGV VTKAQ+VD YAQILTKV+GNEKDAQMCIYHVS
Sbjct: 175 LRTRTNMLFPAGNSKHWLVKMDKPGVEAVTKAQIVDYYAQILTKVMGNEKDAQMCIYHVS 234
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEAS- 179
W++NFGFCCELD++CAQEL GV GVLSVQPD NF SENKDY +NS S+SSEAS
Sbjct: 235 WKTNFGFCCELDEDCAQELAGVLGVLSVQPDNNFESENKDYA----ENSWNVSNSSEASQ 290
Query: 180 PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 239
+KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVK+IMDKISKRSKGYAF+EYTTEEA
Sbjct: 291 EAPLKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEA 350
Query: 240 ASAALKEMNGKIINGWMIVVDVAK-TTPKYSRGR 272
ASAALKEMNGKIINGWMIVVDVAK P+Y R
Sbjct: 351 ASAALKEMNGKIINGWMIVVDVAKPNPPRYHRNH 384
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Query: 76 HWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDEC 135
HW+V MD P GV +K Q++D Y + L VLG+EKDAQMCIY SW ++FGFCC++D+E
Sbjct: 77 HWMVLMDTPPQGVNSKPQVIDYYVKTLQTVLGSEKDAQMCIYDASWNTHFGFCCDIDEEI 136
Query: 136 AQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASPTQIKTKKLFVTGLS 194
+ +L +P VL V+PD F S KDY S+ ++ S + +T LF G S
Sbjct: 137 SAQLASLPEVLLVRPDLEFNSLKKDY-------SLSSGEAGHLSGLRTRTNMLFPAGNS 188
>gi|18402803|ref|NP_566672.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20466724|gb|AAM20679.1| unknown protein [Arabidopsis thaliana]
gi|21536799|gb|AAM61131.1| unknown [Arabidopsis thaliana]
gi|25084257|gb|AAN72206.1| unknown protein [Arabidopsis thaliana]
gi|332642921|gb|AEE76442.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 374
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/274 (68%), Positives = 221/274 (80%), Gaps = 14/274 (5%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
+ IYDAS DTHFGFCC++DE+ SR+LA LPGV+++RP+ DY+S KK+Y
Sbjct: 110 VSIYDASFDTHFGFCCHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGI---------G 160
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
S G +L F GT KHW+VR+DKPGVG+VTKAQMVD Q+L+KVL NEKDAQMC+YHVS
Sbjct: 161 SHKGVSL-FDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVS 219
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASP 180
WQS+FGFCC+LD+ A EL GVPGVL+V PD +F S NKDY G++ Q+S D SE+ P
Sbjct: 220 WQSDFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLNKDYEGDSTQDSR-DQDDSESPP 278
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+KTKKLF+TGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF+EYTTEEAA
Sbjct: 279 --VKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAA 336
Query: 241 SAALKEMNGKIINGWMIVVDVAKTTP-KYSRGRP 273
ALKEMNGKIINGWMIVVDVAKT P + +R +P
Sbjct: 337 GTALKEMNGKIINGWMIVVDVAKTKPFRQNRSQP 370
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 69/92 (75%)
Query: 71 LGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCE 130
L +W+V +DKP V +K+ MVD Y +IL KVLGNEKDAQ+ IY S+ ++FGFCC
Sbjct: 67 LTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCH 126
Query: 131 LDDECAQELTGVPGVLSVQPDENFGSENKDYG 162
+D++ +++L +PGV+S++P++++ SE K+YG
Sbjct: 127 IDEDASRQLASLPGVVSIRPEQDYSSEKKNYG 158
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329118|gb|EFH59537.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/274 (69%), Positives = 221/274 (80%), Gaps = 14/274 (5%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
+ IYDAS DTHFGFCC +DE+ SR+LA LPGV++VRP+ Y+S KK+Y +
Sbjct: 112 VSIYDASFDTHFGFCCYIDEDASRQLACLPGVVSVRPEAGYSSEKKNYG---------FG 162
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
+Q +L F GT KHW+VR+DKPGVG+VTKAQMVD Q+L+KVL NEKDAQMC+YHVS
Sbjct: 163 NQTCVSL-FDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLCNEKDAQMCLYHVS 221
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASP 180
WQS+FGFCC+LD+ A EL GVPGVL+V PD +F S NKDY G++ Q S D SE+ P
Sbjct: 222 WQSDFGFCCDLDENSAVELAGVPGVLAVVPDNSFESLNKDYEGDSTQASR-DQDDSESPP 280
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
IKTKKLF+TGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF+EYTTEEAA
Sbjct: 281 --IKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAA 338
Query: 241 SAALKEMNGKIINGWMIVVDVAKTTP-KYSRGRP 273
SAALKEMNGKIINGWMIVVDVAKT P + +R +P
Sbjct: 339 SAALKEMNGKIINGWMIVVDVAKTKPFRQNRSQP 372
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 67/90 (74%)
Query: 76 HWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDEC 135
+W+V +DKP V +K+ +VD Y +IL KVLGNEKDAQ+ IY S+ ++FGFCC +D++
Sbjct: 74 YWMVLLDKPPQWVSSKSDIVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCYIDEDA 133
Query: 136 AQELTGVPGVLSVQPDENFGSENKDYGGNN 165
+++L +PGV+SV+P+ + SE K+YG N
Sbjct: 134 SRQLACLPGVVSVRPEAGYSSEKKNYGFGN 163
>gi|357442985|ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
gi|355480818|gb|AES62021.1| RNA-binding protein [Medicago truncatula]
Length = 284
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/210 (81%), Positives = 192/210 (91%), Gaps = 2/210 (0%)
Query: 67 LLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFG 126
LLFP G +KHW+VRMDKP VGVVTKAQ+VD YAQILTK++GNEKDAQMCIYHVSW++NFG
Sbjct: 72 LLFPNGNSKHWVVRMDKPAVGVVTKAQIVDHYAQILTKIMGNEKDAQMCIYHVSWKTNFG 131
Query: 127 FCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEAS-PTQIKT 185
FCCELD++CA EL+GVPGVLSVQPD+NF SENKDY G NL+NS+ +SSEAS +KT
Sbjct: 132 FCCELDEDCAHELSGVPGVLSVQPDDNFESENKDYEGRNLENSLNMPNSSEASQEASVKT 191
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
KKLFVTGLSFYTSEKTLRAAFEGFGELVEVK+I+DKISKRSKGYAFIEYTTEEAASAALK
Sbjct: 192 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAASAALK 251
Query: 246 EMNGKIINGWMIVVDVAKTT-PKYSRGRPR 274
EMNGKIINGWMIVVDVAKTT P+Y++G R
Sbjct: 252 EMNGKIINGWMIVVDVAKTTPPRYNKGHAR 281
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMS 56
MCIY S T+FGFCC +DE+ + EL+ +PGVL+V+PD ++ S KDY +++ S
Sbjct: 119 MCIYHVSWKTNFGFCCELDEDCAHELSGVPGVLSVQPDDNFESENKDYEGRNLENS 174
>gi|9293999|dbj|BAB01902.1| unnamed protein product [Arabidopsis thaliana]
Length = 396
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 171/251 (68%), Positives = 202/251 (80%), Gaps = 13/251 (5%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
+ IYDAS DTHFGFCC++DE+ SR+LA LPGV+++RP+ DY+S KK+Y
Sbjct: 110 VSIYDASFDTHFGFCCHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGI---------G 160
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
S G +L F GT KHW+VR+DKPGVG+VTKAQMVD Q+L+KVL NEKDAQMC+YHVS
Sbjct: 161 SHKGVSL-FDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVS 219
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASP 180
WQS+FGFCC+LD+ A EL GVPGVL+V PD +F S NKDY G++ Q+S D SE+ P
Sbjct: 220 WQSDFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLNKDYEGDSTQDSR-DQDDSESPP 278
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+KTKKLF+TGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF+EYTTEEAA
Sbjct: 279 --VKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAA 336
Query: 241 SAALKEMNGKI 251
ALKEMNGK+
Sbjct: 337 GTALKEMNGKV 347
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 69/92 (75%)
Query: 71 LGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCE 130
L +W+V +DKP V +K+ MVD Y +IL KVLGNEKDAQ+ IY S+ ++FGFCC
Sbjct: 67 LTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCH 126
Query: 131 LDDECAQELTGVPGVLSVQPDENFGSENKDYG 162
+D++ +++L +PGV+S++P++++ SE K+YG
Sbjct: 127 IDEDASRQLASLPGVVSIRPEQDYSSEKKNYG 158
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/265 (64%), Positives = 201/265 (75%), Gaps = 8/265 (3%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPD-YNSVKKDYSCLDIQMSNPW 59
M IYDAS D + F C +D+E SR+LA++PGVL V+PD D + +KD + +N
Sbjct: 84 MRIYDASWDGSYEFSCEIDDEASRDLAKMPGVLAVKPDTDKVDMSEKDNHGSGLSAANLG 143
Query: 60 N-SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYH 118
N S + G + WLVRM+KPGV VVTKAQMVD Y Q L KVLGNEKDAQ+ IYH
Sbjct: 144 NFSDAVSNHSSSSGENEFWLVRMEKPGVEVVTKAQMVDHYTQTLMKVLGNEKDAQVSIYH 203
Query: 119 VSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEA 178
+SW+ ++GFCC +D+ECA+EL V GVLSVQPD NFGS+NK+Y G++ SSEA
Sbjct: 204 ISWERDYGFCCHIDEECAKELADVSGVLSVQPDTNFGSDNKNYKGDD------SFKSSEA 257
Query: 179 SPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEE 238
+ ++KTK+LFVTGLSFYTSEKTLRAAFE FGELVEVKIIMDKISKRSKGYAFIEYTTEE
Sbjct: 258 TQAEVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEE 317
Query: 239 AASAALKEMNGKIINGWMIVVDVAK 263
A AALK MNG+IINGWMIVVDVAK
Sbjct: 318 AGGAALKAMNGQIINGWMIVVDVAK 342
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPD-ENFGSENKDYGGNNL 166
++++AQM IY SW ++ F CE+DDE +++L +PGVL+V+PD + KD G+ L
Sbjct: 78 SQEEAQMRIYDASWDGSYEFSCEIDDEASRDLAKMPGVLAVKPDTDKVDMSEKDNHGSGL 137
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/265 (64%), Positives = 201/265 (75%), Gaps = 8/265 (3%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPD-YNSVKKDYSCLDIQMSNPW 59
M IYDAS D + F C +D+E SR+LA++PGVL V+PD D + +KD + +N
Sbjct: 114 MRIYDASWDGSYEFSCEIDDEASRDLAKMPGVLAVKPDTDKVDMSEKDNHGSGLSAANLG 173
Query: 60 N-SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYH 118
N S + G + WLVRM+KPGV VVTKAQMVD Y Q L KVLGNEKDAQ+ IYH
Sbjct: 174 NFSDAVSNHSSSSGENEFWLVRMEKPGVEVVTKAQMVDHYTQTLMKVLGNEKDAQVSIYH 233
Query: 119 VSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEA 178
+SW+ ++GFCC +D+ECA+EL V GVLSVQPD NFGS+NK+Y G++ SSEA
Sbjct: 234 ISWERDYGFCCHIDEECAKELADVSGVLSVQPDTNFGSDNKNYKGDD------SFKSSEA 287
Query: 179 SPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEE 238
+ ++KTK+LFVTGLSFYTSEKTLRAAFE FGELVEVKIIMDKISKRSKGYAFIEYTTEE
Sbjct: 288 TQAEVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEE 347
Query: 239 AASAALKEMNGKIINGWMIVVDVAK 263
A AALK MNG+IINGWMIVVDVAK
Sbjct: 348 AGGAALKAMNGQIINGWMIVVDVAK 372
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 77 WLVRMDKP----GVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELD 132
W+V M++P G G V++A+ VD Y L +VLG++++AQM IY SW ++ F CE+D
Sbjct: 73 WVVVMERPPAPAGGGEVSRAEAVDHYVATLARVLGSQEEAQMRIYDASWDGSYEFSCEID 132
Query: 133 DECAQELTGVPGVLSVQPD-ENFGSENKDYGGNNL 166
DE +++L +PGVL+V+PD + KD G+ L
Sbjct: 133 DEASRDLAKMPGVLAVKPDTDKVDMSEKDNHGSGL 167
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/267 (62%), Positives = 199/267 (74%), Gaps = 7/267 (2%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
M I +AS D + F C +DE+ S+ELA++PGVL+V+ D N +KD L + +N +
Sbjct: 121 MRICEASWDGTYEFRCEIDEDASKELAKMPGVLSVQLDMG-NKSEKDNHSLSLSTANLVS 179
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
G + G + WLVRM+KPGV VVTKAQMVD Y QIL KVLGNE+DAQ+ IYHVS
Sbjct: 180 ISDGASTSSS-GKNEFWLVRMEKPGVEVVTKAQMVDHYTQILMKVLGNEQDAQVSIYHVS 238
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASP 180
W ++GFCC +D+ECA+EL VPGVLSVQPD NFGS+NK+Y G++ S S
Sbjct: 239 WDRDYGFCCHIDEECAKELADVPGVLSVQPDTNFGSDNKNYKGDDGVKS-----SEGTGA 293
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
IKTK+LFVTGLSFYTSEKTLRAAFE FGELVEVKIIMD+ISKRSKGYAF+EYTTEEA
Sbjct: 294 VDIKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAG 353
Query: 241 SAALKEMNGKIINGWMIVVDVAKTTPK 267
AALK MNG+IINGWMIVVDVAKT +
Sbjct: 354 GAALKAMNGQIINGWMIVVDVAKTRSR 380
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 74 TKHWLVRMDKP----GVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCC 129
+ W+V MD P G V++A+ VD YA L +V+G+EK+AQM I SW + F C
Sbjct: 77 SSRWVVVMDTPPAAAGGSGVSRAEAVDYYAATLAQVVGSEKEAQMRICEASWDGTYEFRC 136
Query: 130 ELDDECAQELTGVPGVLSVQPDENFGSENKDY 161
E+D++ ++EL +PGVLSVQ D SE ++
Sbjct: 137 EIDEDASKELAKMPGVLSVQLDMGNKSEKDNH 168
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/271 (61%), Positives = 202/271 (74%), Gaps = 13/271 (4%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
M I +AS D + F C +DE+ S+ELA++PGVL+V+ D N +KD L + +N +
Sbjct: 121 MRICEASWDGTYEFRCEIDEDASKELAKMPGVLSVQLDMG-NKSEKDNHSLSLSTANLVS 179
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS 120
G + G + WLVRM+KPGV VVTKAQMVD Y QIL KVLGNE+DAQ+ IYHVS
Sbjct: 180 ISDGASTSSS-GKNEFWLVRMEKPGVEVVTKAQMVDHYTQILMKVLGNEQDAQVSIYHVS 238
Query: 121 WQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDY---GGNNLQNSMVPSDSSE 177
W ++GFCC +D+ECA+EL VPGVLSVQPD NFGS+NK+Y G + ++ SSE
Sbjct: 239 WDRDYGFCCHIDEECAKELADVPGVLSVQPDTNFGSDNKNYKVSGDDGVK-------SSE 291
Query: 178 AS-PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTT 236
+ IKTK+LFVTGLSFYTSEKTLRAAFE FGELVEVKIIMD+ISKRSKGYAF+EYTT
Sbjct: 292 GTGAVDIKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTT 351
Query: 237 EEAASAALKEMNGKIINGWMIVVDVAKTTPK 267
EEA AALK MNG+IINGWMIVVDVAKT +
Sbjct: 352 EEAGGAALKAMNGQIINGWMIVVDVAKTRSR 382
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 74 TKHWLVRMDKP----GVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCC 129
+ W+V MD P G V++A+ VD YA L +V+G+EK+AQM I SW + F C
Sbjct: 77 SSRWVVVMDTPPAAAGGSGVSRAEAVDYYAATLAQVVGSEKEAQMRICEASWDGTYEFRC 136
Query: 130 ELDDECAQELTGVPGVLSVQPDENFGSENKDY 161
E+D++ ++EL +PGVLSVQ D SE ++
Sbjct: 137 EIDEDASKELAKMPGVLSVQLDMGNKSEKDNH 168
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/267 (61%), Positives = 205/267 (76%), Gaps = 11/267 (4%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MCIYDA D + F C ++EE ++ELA++PGVL VR + ++ ++D L + +N
Sbjct: 108 MCIYDALWDRSYEFWCEIEEEAAKELAKMPGVLAVRA-VEGDASEEDNRSLSLSPAN--L 164
Query: 61 SQIGTTLLFPLGTTKH---WLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIY 117
+ + P + + WLVRM+KPGV VVTKAQMVD Y QIL KV+GN+KDAQ+ IY
Sbjct: 165 ASLSDDACNPSSSRRKNEFWLVRMEKPGVEVVTKAQMVDHYTQILMKVVGNDKDAQVSIY 224
Query: 118 HVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
HVSW+ ++GFCC +D+ECA+EL VPGVLSV PD NFGS+NKDY G++ S+ S++++
Sbjct: 225 HVSWEKDYGFCCHIDEECAKELADVPGVLSVLPDTNFGSDNKDYKGDD---SLKSSEATQ 281
Query: 178 ASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTE 237
+ +KTK+LFVTGLSFYTSEKTLRAAFE FGELVEVKIIMDKISKRSKGYAFIEYTTE
Sbjct: 282 VA--DVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTE 339
Query: 238 EAASAALKEMNGKIINGWMIVVDVAKT 264
+A AALK MNG+IINGWMIVVDVAKT
Sbjct: 340 DAGGAALKAMNGEIINGWMIVVDVAKT 366
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 6/119 (5%)
Query: 76 HWLVRMDKP----GVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCEL 131
W V MD P G G V++A+ VD Y L +VLG+E+DAQMCIY W ++ F CE+
Sbjct: 66 RWAVSMDDPPVPEGGGEVSRAEAVDYYVATLARVLGSEQDAQMCIYDALWDRSYEFWCEI 125
Query: 132 DDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEA-SPTQIKTKKLF 189
++E A+EL +PGVL+V+ E SE +D +L + + S S +A +P+ + K F
Sbjct: 126 EEEAAKELAKMPGVLAVRAVEGDASE-EDNRSLSLSPANLASLSDDACNPSSSRRKNEF 183
>gi|388491258|gb|AFK33695.1| unknown [Medicago truncatula]
Length = 224
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/144 (77%), Positives = 127/144 (88%), Gaps = 1/144 (0%)
Query: 67 LLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFG 126
LLFP G +KHW+VRMDKP VGVVTKAQ+VD YAQILTK++GNEKDAQMCIYHVSW++NFG
Sbjct: 72 LLFPNGNSKHWVVRMDKPAVGVVTKAQIVDHYAQILTKIMGNEKDAQMCIYHVSWKTNFG 131
Query: 127 FCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEAS-PTQIKT 185
FCCELD++CA EL+GVPGVLSVQPD+NF SENKDY G NL+NS+ +SSEAS +KT
Sbjct: 132 FCCELDEDCAHELSGVPGVLSVQPDDNFESENKDYEGRNLENSLNMPNSSEASQEASVKT 191
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGF 209
KKLFVTGLSFYTSEKTLRAAFE
Sbjct: 192 KKLFVTGLSFYTSEKTLRAAFEAL 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMS 56
MCIY S T+FGFCC +DE+ + EL+ +PGVL+V+PD ++ S KDY +++ S
Sbjct: 119 MCIYHVSWKTNFGFCCELDEDCAHELSGVPGVLSVQPDDNFESENKDYEGRNLENS 174
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 77/93 (82%)
Query: 180 PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 239
PT+ + KLFVTGLS YT+E+TL+ AF +G++V+V+IIM+K ++RSKG+ F+E++TEE
Sbjct: 82 PTRTRNNKLFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRSKGFGFVEFSTEEE 141
Query: 240 ASAALKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
A+ ALKEMNGKI+NGW+I VD+AK TP+ R R
Sbjct: 142 ANTALKEMNGKILNGWLISVDIAKPTPRSGRAR 174
>gi|357110746|ref|XP_003557177.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Brachypodium distachyon]
Length = 230
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L K+LG+E++A+ IY+VS + FGF
Sbjct: 88 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKILGSEEEAKKKIYNVSCERYFGF 147
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 148 GCEIDEETSNKLEGIPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 197
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L +PGVL V PD + KDY
Sbjct: 136 IYNVSCERYFGFGCEIDEETSNKLEGIPGVLFVLPDSYVDPENKDY 181
>gi|357124462|ref|XP_003563919.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Brachypodium distachyon]
Length = 227
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L K+LG+E++A+ IY+VS + FGF
Sbjct: 85 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKILGSEEEAKKKIYNVSCEQYFGF 144
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 145 GCEIDEETSNKLEGIPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 194
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSC 50
IY+ SC+ +FGF C +DEETS +L +PGVL V PD + KDY
Sbjct: 133 IYNVSCEQYFGFGCEIDEETSNKLEGIPGVLFVLPDSYVDPENKDYGA 180
>gi|357138367|ref|XP_003570764.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
distachyon]
Length = 239
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L K+LG+E++A+ IY+VS + FGF
Sbjct: 98 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKILGSEEEAKKKIYNVSCERYFGF 157
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 158 GCEIDEETSNKLEGIPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 207
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSC 50
IY+ SC+ +FGF C +DEETS +L +PGVL V PD + KDY
Sbjct: 146 IYNVSCERYFGFGCEIDEETSNKLEGIPGVLFVLPDSYVDPENKDYGA 193
>gi|38344141|emb|CAD41861.2| OSJNBa0041A02.8 [Oryza sativa Japonica Group]
gi|116310924|emb|CAH67862.1| B0403H10-OSIGBa0105A11.14 [Oryza sativa Indica Group]
gi|218195501|gb|EEC77928.1| hypothetical protein OsI_17265 [Oryza sativa Indica Group]
gi|222629485|gb|EEE61617.1| hypothetical protein OsJ_16041 [Oryza sativa Japonica Group]
Length = 223
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 70/110 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + FGF
Sbjct: 79 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGF 138
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD +ENKDYG N + S E
Sbjct: 139 GCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELFVNGEIVQRSPE 188
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD ++ KDY
Sbjct: 127 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDY 172
>gi|212723786|ref|NP_001131166.1| uncharacterized protein LOC100192474 [Zea mays]
gi|194690760|gb|ACF79464.1| unknown [Zea mays]
Length = 217
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 70/110 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L +VLG+E++A+ IY+VS + FGF
Sbjct: 73 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVLGSEEEAKKKIYNVSCERYFGF 132
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD +ENKDYG N + S E
Sbjct: 133 GCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELFVNGEIVQRSPE 182
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD ++ KDY
Sbjct: 121 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDY 166
>gi|357165682|ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
distachyon]
Length = 215
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 70/110 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + FGF
Sbjct: 71 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGF 130
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD +ENKDYG N + S E
Sbjct: 131 GCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELFVNGEIVQRSPE 180
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD ++ KDY
Sbjct: 119 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDY 164
>gi|15223247|ref|NP_174536.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
gi|12322451|gb|AAG51246.1|AC055769_5 plastid protein, putative; 23108-24430 [Arabidopsis thaliana]
gi|17381078|gb|AAL36351.1| putative plastid protein [Arabidopsis thaliana]
gi|20465721|gb|AAM20329.1| putative plastid protein [Arabidopsis thaliana]
gi|332193385|gb|AEE31506.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
Length = 229
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 67/104 (64%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L K++G+E++A+ IY+VS + FGF
Sbjct: 87 LFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGF 146
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + +L G+PGVL + PD ENKDYG N +
Sbjct: 147 GCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGAELFVNGEI 190
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL + PD + KDY
Sbjct: 135 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDY 180
>gi|297846232|ref|XP_002890997.1| hypothetical protein ARALYDRAFT_473448 [Arabidopsis lyrata subsp.
lyrata]
gi|297336839|gb|EFH67256.1| hypothetical protein ARALYDRAFT_473448 [Arabidopsis lyrata subsp.
lyrata]
Length = 229
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 66/104 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L K+LG+E++A+ IY+VS + FGF
Sbjct: 87 LFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKILGSEEEAKKKIYNVSCERYFGF 146
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + + G+PGVL V PD ENKDYG N +
Sbjct: 147 GCEIDEETSNKFEGLPGVLFVLPDSYVDQENKDYGAELFVNGEI 190
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS + LPGVL V PD + KDY
Sbjct: 135 IYNVSCERYFGFGCEIDEETSNKFEGLPGVLFVLPDSYVDQENKDY 180
>gi|326511313|dbj|BAJ87670.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 94 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVLGSEEEARKKIYNVSCERYFGF 153
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD E+KDYG N + S E
Sbjct: 154 GCEIDEETSNKLEGIPGVLFVLPDSYVDPEHKDYGAELFVNGEIVQRSPE 203
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSC 50
IY+ SC+ +FGF C +DEETS +L +PGVL V PD + KDY
Sbjct: 142 IYNVSCERYFGFGCEIDEETSNKLEGIPGVLFVLPDSYVDPEHKDYGA 189
>gi|388494872|gb|AFK35502.1| unknown [Medicago truncatula]
Length = 217
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG +K QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 76 LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGF 135
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 136 GCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 185
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 124 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDY 169
>gi|255584289|ref|XP_002532881.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
gi|223527366|gb|EEF29510.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
Length = 248
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + FGF
Sbjct: 107 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGF 166
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 167 GCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 216
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 155 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDY 200
>gi|326489426|dbj|BAK01694.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 69/110 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG +K QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 99 LFPGCDYEHWLIVMDKPGGEGASKHQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGF 158
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD E+KDYG N + S E
Sbjct: 159 GCEIDEETSNKLEGIPGVLFVLPDSYVDPEHKDYGAELFVNGEIVQRSPE 208
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSC 50
IY+ SC+ +FGF C +DEETS +L +PGVL V PD + KDY
Sbjct: 147 IYNVSCERYFGFGCEIDEETSNKLEGIPGVLFVLPDSYVDPEHKDYGA 194
>gi|449432522|ref|XP_004134048.1| PREDICTED: DAG protein, chloroplastic-like [Cucumis sativus]
gi|449517983|ref|XP_004166023.1| PREDICTED: DAG protein, chloroplastic-like [Cucumis sativus]
Length = 243
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L K++G+E++A+ IY+VS + FGF
Sbjct: 102 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKIVGSEEEAKKRIYNVSCERYFGF 161
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CELD+E + +L G+PGVL V PD E KDYG L N + S E
Sbjct: 162 GCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELLVNGEIVQRSPE 211
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 150 IYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDY 195
>gi|226508028|ref|NP_001149488.1| LOC100283114 [Zea mays]
gi|195627510|gb|ACG35585.1| DAG protein [Zea mays]
gi|223973333|gb|ACN30854.1| unknown [Zea mays]
Length = 215
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 70/110 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L +V+G+E++A+ IY+VS + FGF
Sbjct: 71 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVVGSEEEAKKRIYNVSCERYFGF 130
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD +ENKDYG N + S E
Sbjct: 131 GCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELFVNGEIVQRSPE 180
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD ++ KDY
Sbjct: 119 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDY 164
>gi|388521639|gb|AFK48881.1| unknown [Medicago truncatula]
Length = 217
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG +K QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 76 LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGF 135
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 136 GCEIDGETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 185
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +D ETS +L LPGVL V PD + KDY
Sbjct: 124 IYNVSCERYFGFGCEIDGETSNKLEGLPGVLFVLPDSYVDPENKDY 169
>gi|242074226|ref|XP_002447049.1| hypothetical protein SORBIDRAFT_06g027510 [Sorghum bicolor]
gi|241938232|gb|EES11377.1| hypothetical protein SORBIDRAFT_06g027510 [Sorghum bicolor]
Length = 216
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 70/110 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L +V+G+E++A+ IY+VS + FGF
Sbjct: 72 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVVGSEEEAKKRIYNVSCERYFGF 131
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD +ENKDYG N + S E
Sbjct: 132 GCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDYGAELFVNGEIVQRSPE 181
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD ++ KDY
Sbjct: 120 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKDY 165
>gi|24413962|dbj|BAC22214.1| putative plastid protein [Oryza sativa Japonica Group]
Length = 227
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 86 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGF 145
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD E KDYG N + S E
Sbjct: 146 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPE 195
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSC 50
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 134 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 181
>gi|413942659|gb|AFW75308.1| hypothetical protein ZEAMMB73_861231 [Zea mays]
Length = 217
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 67/104 (64%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 76 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGF 135
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + +L G+PGVL V PD E KDYG L N +
Sbjct: 136 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELLVNGEI 179
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSC 50
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 124 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 171
>gi|115466046|ref|NP_001056622.1| Os06g0116600 [Oryza sativa Japonica Group]
gi|55296199|dbj|BAD67917.1| putative DAL1 protein [Oryza sativa Japonica Group]
gi|113594662|dbj|BAF18536.1| Os06g0116600 [Oryza sativa Japonica Group]
gi|218197457|gb|EEC79884.1| hypothetical protein OsI_21391 [Oryza sativa Indica Group]
gi|222634859|gb|EEE64991.1| hypothetical protein OsJ_19911 [Oryza sativa Japonica Group]
Length = 165
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 24 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGF 83
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD E KDYG N + S E
Sbjct: 84 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPE 133
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 72 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDY 117
>gi|116786182|gb|ABK24009.1| unknown [Picea sitchensis]
gi|224285222|gb|ACN40337.1| unknown [Picea sitchensis]
Length = 244
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Query: 48 YSCLDIQMSNPWNSQ--IGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKV 105
YS L+ N W+ + + T LFP +HWL+ MD P G TK +M+D Y Q L KV
Sbjct: 79 YSPLNNSSPN-WSDRPPVETAPLFPGCDYEHWLIVMDHPNEGKATKQEMIDCYIQTLAKV 137
Query: 106 LGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNN 165
LG+E+ A+ IY+VS + FGF C++D+E + +L G+PGV+ V PD +E KDYGG
Sbjct: 138 LGSEEAAKKSIYNVSCERYFGFGCQIDEETSNKLVGLPGVVFVLPDSYVDAEYKDYGGEL 197
Query: 166 LQNSMVPSDSSE 177
L + + S E
Sbjct: 198 LVDGKIVERSPE 209
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGV+ V PD ++ KDY
Sbjct: 148 IYNVSCERYFGFGCQIDEETSNKLVGLPGVVFVLPDSYVDAEYKDY 193
>gi|297823137|ref|XP_002879451.1| hypothetical protein ARALYDRAFT_482286 [Arabidopsis lyrata subsp.
lyrata]
gi|297325290|gb|EFH55710.1| hypothetical protein ARALYDRAFT_482286 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + GF
Sbjct: 78 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGF 137
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 138 GCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 187
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ + GF C +DEETS +L LPGVL V PD + KDY
Sbjct: 126 IYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDY 171
>gi|116779516|gb|ABK21318.1| unknown [Picea sitchensis]
Length = 265
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 48 YSCLDIQMSNPWNSQ--IGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKV 105
YS L N W+ + + T LFP +HWL+ MD P G TK +M+D Y Q L KV
Sbjct: 100 YSPLSNSSPN-WSDRPPVETAPLFPGCDYEHWLIVMDPPNEGKATKQEMIDCYIQTLAKV 158
Query: 106 LGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNN 165
LG+E+ A+ IY+VS + FGF C++D+E + +L G+PGV+ V PD +E KDYGG
Sbjct: 159 LGSEEAAKKSIYNVSCERYFGFGCQIDEETSNKLVGLPGVVFVLPDSYVDAEYKDYGGEL 218
Query: 166 LQNSMVPSDSSE 177
L + + S E
Sbjct: 219 LVDGKIVERSPE 230
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGV+ V PD ++ KDY
Sbjct: 169 IYNVSCERYFGFGCQIDEETSNKLVGLPGVVFVLPDSYVDAEYKDY 214
>gi|225433215|ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis vinifera]
gi|147779193|emb|CAN67991.1| hypothetical protein VITISV_023920 [Vitis vinifera]
Length = 233
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + FGF
Sbjct: 92 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGF 151
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD E KDYG N + S E
Sbjct: 152 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPE 201
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 140 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDY 185
>gi|15226108|ref|NP_180901.1| protein differentiation and greening-like 1 [Arabidopsis thaliana]
gi|17933285|gb|AAL48226.1|AF446351_1 At2g33430/F4P9.20 [Arabidopsis thaliana]
gi|2459425|gb|AAB80660.1| plastid protein [Arabidopsis thaliana]
gi|20453405|gb|AAM19941.1| At2g33430/F4P9.20 [Arabidopsis thaliana]
gi|110736869|dbj|BAF00392.1| plastid protein [Arabidopsis thaliana]
gi|330253739|gb|AEC08833.1| protein differentiation and greening-like 1 [Arabidopsis thaliana]
Length = 219
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + GF
Sbjct: 78 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGF 137
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 138 GCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 187
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ + GF C +DEETS +L LPGVL V PD + KDY
Sbjct: 126 IYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDY 171
>gi|21617909|gb|AAM66959.1| plastid protein [Arabidopsis thaliana]
Length = 219
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + GF
Sbjct: 78 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGF 137
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 138 GCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 187
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ + GF C +DEETS +L LPGVL V PD + KDY
Sbjct: 126 IYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDY 171
>gi|2246378|emb|CAB06698.1| plastid protein [Arabidopsis thaliana]
Length = 198
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + GF
Sbjct: 57 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGF 116
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 117 GCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 166
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ + GF C +DEETS +L LPGVL V PD + KDY
Sbjct: 105 IYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDY 150
>gi|226500086|ref|NP_001150208.1| DAG protein [Zea mays]
gi|195637572|gb|ACG38254.1| DAG protein [Zea mays]
gi|223947219|gb|ACN27693.1| unknown [Zea mays]
gi|413953464|gb|AFW86113.1| DAG protein [Zea mays]
Length = 223
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 69/110 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG +K QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 82 LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGF 141
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD +E KDYG N + + E
Sbjct: 142 GCEIDEETSNKLEGLPGVLFVLPDSYVDAEYKDYGAELFVNGEIVQRTPE 191
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSC 50
IY+ SC+ +FGF C +DEETS +L LPGVL V PD ++ KDY
Sbjct: 130 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAEYKDYGA 177
>gi|225438029|ref|XP_002271431.1| PREDICTED: DAG protein, chloroplastic-like [Vitis vinifera]
Length = 227
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + FGF
Sbjct: 86 LFPGCDYEHWLIVMDKPGGEGATKHQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGF 145
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L +PGVL V PD ENKDYG N + S E
Sbjct: 146 GCEIDEETSNKLEDLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 195
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 134 IYNVSCERYFGFGCEIDEETSNKLEDLPGVLFVLPDSYVDPENKDY 179
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 80/112 (71%), Gaps = 4/112 (3%)
Query: 153 NFGSENKDYGGNNL-QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGE 211
++G N+ GN+L + +PS ++ S I +L+V+GLSF T+E++LR AFE FG+
Sbjct: 48 SWGPFNRPRNGNDLFAVACLPSSPNQPS---IPKTRLYVSGLSFRTTEESLRNAFETFGQ 104
Query: 212 LVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
LVEV ++MDKI+ R +G+AF+ Y+TEE + A++ M+GK ++G +I V+VAK
Sbjct: 105 LVEVNLVMDKIANRPRGFAFLRYSTEEESEKAIEGMHGKFLDGRVIFVEVAK 156
>gi|297744189|emb|CBI37159.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L KV+G+E++A+ IY+VS + FGF
Sbjct: 4 LFPGCDYEHWLIVMDKPGGEGATKHQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGF 63
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L +PGVL V PD ENKDYG N + S E
Sbjct: 64 GCEIDEETSNKLEDLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 113
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 52 IYNVSCERYFGFGCEIDEETSNKLEDLPGVLFVLPDSYVDPENKDY 97
>gi|2440029|emb|CAA75116.1| DAL1 protein [Arabidopsis thaliana]
gi|2440031|emb|CAA75115.1| DAL1 protein [Arabidopsis thaliana]
Length = 219
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK +M+D Y Q L KV+G+E++A+ IY+VS + GF
Sbjct: 78 LFPGCDYEHWLIVMDKPGGEGATKHEMIDCYIQTLAKVVGSEEEAKKRIYNVSCERYLGF 137
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 138 GCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 187
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ + GF C +DEETS +L LPGVL V PD + KDY
Sbjct: 126 IYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDY 171
>gi|326530037|dbj|BAK08298.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 72/120 (60%), Gaps = 21/120 (17%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
MCIYDAS D + FCC +DEE S++L+++PGVL VR VK D S D NP +
Sbjct: 110 MCIYDASWDRSYEFCCEIDEEASKKLSKMPGVLAVR------MVKGDVSEKD----NP-S 158
Query: 61 SQIGTTLLFPLGT----------TKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEK 110
S I L ++ WLVRM+KPGV VVT+AQMVD Y QIL KV+GNE+
Sbjct: 159 SSISPANLASFSNAACNNSSSEKSEFWLVRMEKPGVEVVTQAQMVDHYTQILMKVVGNER 218
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 4/78 (5%)
Query: 76 HWLVRMD---KPGVGV-VTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCEL 131
W+V MD P VG V++A+ VD Y L +VLG+E++AQMCIY SW ++ FCCE+
Sbjct: 68 RWVVVMDDPPAPAVGSEVSRAEAVDYYVATLARVLGSEQEAQMCIYDASWDRSYEFCCEI 127
Query: 132 DDECAQELTGVPGVLSVQ 149
D+E +++L+ +PGVL+V+
Sbjct: 128 DEEASKKLSKMPGVLAVR 145
>gi|118487925|gb|ABK95784.1| unknown [Populus trichocarpa]
Length = 241
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 65/96 (67%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L+KV+G+E++A+ IY+VS + FGF
Sbjct: 100 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLSKVVGSEEEAKNKIYNVSCERYFGF 159
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGG 163
CE+D+E + +L G+PGVL V PD E KDYG
Sbjct: 160 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 195
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 148 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDY 193
>gi|357441057|ref|XP_003590806.1| Plastid protein [Medicago truncatula]
gi|355479854|gb|AES61057.1| Plastid protein [Medicago truncatula]
Length = 235
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 68/110 (61%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP HWL+ +DKPG TK QM+D Y + L +VLG+E++A+ IY+VS + FGF
Sbjct: 94 LFPGCDYNHWLIIIDKPGGEGATKQQMIDCYVKTLAQVLGSEEEAKKKIYNVSCERYFGF 153
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CELD+E + +L G+PGVL V PD E++DYG N + S E
Sbjct: 154 GCELDEETSNKLEGIPGVLFVLPDSYVDPEHQDYGAELFVNGEIVQRSPE 203
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L +PGVL V PD + +DY
Sbjct: 142 IYNVSCERYFGFGCELDEETSNKLEGIPGVLFVLPDSYVDPEHQDY 187
>gi|351734498|ref|NP_001236832.1| uncharacterized protein LOC100306054 [Glycine max]
gi|255627403|gb|ACU14046.1| unknown [Glycine max]
Length = 241
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 66/110 (60%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP HWL+ M+ PG K QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 96 LFPGCDYNHWLIVMENPGGEGANKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGF 155
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
CE+D+E + +L G+PGVL V PD ENKDYG N + S E
Sbjct: 156 GCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 205
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 144 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDY 189
>gi|224110610|ref|XP_002315577.1| predicted protein [Populus trichocarpa]
gi|222864617|gb|EEF01748.1| predicted protein [Populus trichocarpa]
Length = 145
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 67/104 (64%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L+KV+G+E++A+ IY+VS + FGF
Sbjct: 4 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLSKVVGSEEEAKNKIYNVSCERYFGF 63
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + +L G+PGVL V PD E KDYG N +
Sbjct: 64 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEI 107
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 52 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDY 97
>gi|242091772|ref|XP_002436376.1| hypothetical protein SORBIDRAFT_10g001390 [Sorghum bicolor]
gi|241914599|gb|EER87743.1| hypothetical protein SORBIDRAFT_10g001390 [Sorghum bicolor]
Length = 222
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 65/104 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG K QM+D Y Q L KVLG+E++A+ IY+VS + FGF
Sbjct: 81 LFPGCDYEHWLIVMDKPGGEGANKQQMIDCYIQTLAKVLGSEEEAKRKIYNVSCERYFGF 140
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + +L G+PGVL V PD E KDYG N +
Sbjct: 141 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEI 184
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSC 50
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 129 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGA 176
>gi|297788043|ref|XP_002862198.1| hypothetical protein ARALYDRAFT_921093 [Arabidopsis lyrata subsp.
lyrata]
gi|297827001|ref|XP_002881383.1| hypothetical protein ARALYDRAFT_902623 [Arabidopsis lyrata subsp.
lyrata]
gi|297307447|gb|EFH38456.1| hypothetical protein ARALYDRAFT_921093 [Arabidopsis lyrata subsp.
lyrata]
gi|297327222|gb|EFH57642.1| hypothetical protein ARALYDRAFT_902623 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 66/104 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ M+KPG K QM+D Y Q L K++G+E++A+ IY+VS + FGF
Sbjct: 90 LFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAKIVGSEEEAKKKIYNVSCERYFGF 149
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + +L G+PGVL V PD E KDYG +N V
Sbjct: 150 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGAELFENGEV 193
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 138 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDY 183
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 63/89 (70%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T KLFV GLSFYT+EK L AF FGE+VEVK++MD++S+RSKG+ F++Y +E A A
Sbjct: 31 TTKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERAK 90
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSRGRP 273
EMNGK+++G +I VD K + S P
Sbjct: 91 AEMNGKVLSGRIIFVDTVKPKSQLSGDLP 119
>gi|224102209|ref|XP_002312591.1| predicted protein [Populus trichocarpa]
gi|222852411|gb|EEE89958.1| predicted protein [Populus trichocarpa]
Length = 241
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y + L KV+G+E++A+ IY+VS + FGF
Sbjct: 100 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIETLAKVVGSEEEAKTKIYNVSCERYFGF 159
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + +L G+PGVL V PD E KDYG N +
Sbjct: 160 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEI 203
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 148 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDY 193
>gi|224097690|ref|XP_002334594.1| predicted protein [Populus trichocarpa]
gi|222873359|gb|EEF10490.1| predicted protein [Populus trichocarpa]
Length = 145
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y + L KV+G+E++A+ IY+VS + FGF
Sbjct: 4 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIETLAKVVGSEEEAKTKIYNVSCERYFGF 63
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + +L G+PGVL V PD E KDYG N +
Sbjct: 64 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEI 107
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 52 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDY 97
>gi|15226934|ref|NP_181067.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
gi|3668082|gb|AAC61814.1| unknown protein [Arabidopsis thaliana]
gi|18253009|gb|AAL62431.1| unknown protein [Arabidopsis thaliana]
gi|28059631|gb|AAO30077.1| unknown protein [Arabidopsis thaliana]
gi|330253991|gb|AEC09085.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
Length = 232
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 65/104 (62%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ M+KPG K QM+D Y Q L K++G+E++A+ IY+VS + FGF
Sbjct: 90 LFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAKIVGSEEEARKKIYNVSCERYFGF 149
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
CE+D+E + +L G+PGVL V PD E KDYG N V
Sbjct: 150 GCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGAELFVNGEV 193
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 138 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDY 183
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 63/77 (81%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL+V+GLSF T+E++LR AF+ FG+LVEVK++MD+I+ R +G+AF+ Y TEE + A++
Sbjct: 89 KLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEG 148
Query: 247 MNGKIINGWMIVVDVAK 263
M+GK ++G +I V+VAK
Sbjct: 149 MHGKFLDGRVIFVEVAK 165
>gi|217075036|gb|ACJ85878.1| unknown [Medicago truncatula]
Length = 222
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP HWL+ +DKPG TK QM+D Y + L +VLG+E++A+ IY+VS + FGF
Sbjct: 94 LFPGCDYNHWLIIIDKPGGEGATKQQMIDCYVKTLAQVLGSEEEAKKKIYNVSCERYFGF 153
Query: 128 CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
ELD+E + +L G+PGVL V PD E++DYG N + S E
Sbjct: 154 GRELDEETSNKLEGIPGVLFVLPDSYVDPEHQDYGAELFVNGEIVQRSPE 203
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF +DEETS +L +PGVL V PD + +DY
Sbjct: 142 IYNVSCERYFGFGRELDEETSNKLEGIPGVLFVLPDSYVDPEHQDY 187
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 63/88 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL+V+GLSF T+E TLR FE FG L+ + ++MDK++ R KG+AF+ Y TEE A A++
Sbjct: 78 KLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQG 137
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
M+GK ++G +I V+ AKT SR +PR
Sbjct: 138 MHGKFLDGRVIFVEEAKTRSDMSRAKPR 165
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Query: 144 GVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASPTQIKTK-KLFVTGLSFYTSEKTL 202
G ++V F + GG + + + P SS + TK KL+V+GLSF T+E TL
Sbjct: 34 GRINVGTGVIFARRRRGIGGFLITSCLSPDSSSSPPSSPSGTKTKLYVSGLSFRTTEDTL 93
Query: 203 RAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVA 262
R FE FG+L+ + ++MDK++ R +G+AF+ Y TEE A A++ M+GK ++G +I V+ A
Sbjct: 94 RDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEA 153
Query: 263 KTTPKYSRGRPR 274
KT SR +PR
Sbjct: 154 KTRSDISRAKPR 165
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 64/81 (79%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ KL+V+GLSF T+E++LR AF+ FG+LV+V ++MDK++KR +G+AF+ Y TEE A
Sbjct: 87 FRKTKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQK 146
Query: 243 ALKEMNGKIINGWMIVVDVAK 263
A++ M+GK ++G +I V+VAK
Sbjct: 147 AIEGMHGKFLDGRVIFVEVAK 167
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF+T+EKTL AF +G++VE K+I D+IS++SKGY F+ + +++ A A+ E
Sbjct: 33 KLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKAITE 92
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRP 273
MN K +NG ++ VD AK K S G P
Sbjct: 93 MNEKALNGRVVFVDYAKPDTKRSMGMP 119
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 20/148 (13%)
Query: 119 VSWQSNFGF---CCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDS 175
V+ ++FGF C T +P SV G N+ PS S
Sbjct: 12 VAASTSFGFTIVACPFPSR-----THLPAASSV------GVRNQQRASTATACLPPPSTS 60
Query: 176 SEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYT 235
A+ +L+V+GLSF T+E++LR AFE FG+L EV ++MD+++KR +G+AF+ YT
Sbjct: 61 HGAA------TRLYVSGLSFRTTERSLRDAFEKFGDLTEVCLVMDRVAKRPRGFAFLSYT 114
Query: 236 TEEAASAALKEMNGKIINGWMIVVDVAK 263
EE A A++ M+GK ++G +I V+VAK
Sbjct: 115 GEEEARGAMEGMHGKFLDGRVIFVEVAK 142
>gi|413938709|gb|AFW73260.1| chloroplast protein synthesis 4 [Zea mays]
Length = 232
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWN 60
M I +AS D + F C +DE+ S+ELA++PGVL+V+ D N +KD L + +N +
Sbjct: 121 MRICEASWDGTYEFRCEIDEDASKELAKMPGVLSVQLDMG-NKSEKDNHSLSLSTANLVS 179
Query: 61 SQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
G + G + WLVRM+KPGV VVTKAQMVD Y QIL KVLG
Sbjct: 180 ISDGASTSSS-GKNEFWLVRMEKPGVEVVTKAQMVDHYTQILMKVLG 225
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 74 TKHWLVRMDKP----GVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCC 129
+ W+V MD P G V++A+ VD YA L +V+G+EK+AQM I SW + F C
Sbjct: 77 SSRWVVVMDTPPAAAGGSGVSRAEAVDYYAATLAQVVGSEKEAQMRICEASWDGTYEFRC 136
Query: 130 ELDDECAQELTGVPGVLSVQPDENFGSENKDY 161
E+D++ ++EL +PGVLSVQ D SE ++
Sbjct: 137 EIDEDASKELAKMPGVLSVQLDMGNKSEKDNH 168
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSFYT+EK L F +G++VE KI+MD++S RSKG+ F+ + +EE A A E
Sbjct: 35 KLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKARTE 94
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRP 273
M+GK +NG I VD AK + G P
Sbjct: 95 MDGKELNGRTIFVDYAKPRADFGGGMP 121
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ KLF++GLS T+++ L+ AF FG+L+E K+I D+IS RSKG+ F+ Y T E A
Sbjct: 64 LTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAEN 123
Query: 243 ALKEMNGKIINGWMIVVDVAKTTPKYSRGRPR 274
A +EMN K ++GW+I VD AK P+ + PR
Sbjct: 124 ARQEMNAKFLDGWVIFVDPAK--PRQQKPAPR 153
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ KLF++GLS T+++ L+ AF FG+L+E K+I D+IS RSKG+ F+ Y T E A
Sbjct: 64 LTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAEN 123
Query: 243 ALKEMNGKIINGWMIVVDVAKTTPKYSRGRPR 274
A +EMN K ++GW+I VD AK P+ + PR
Sbjct: 124 ARQEMNAKFLDGWVIFVDPAK--PRQQKPAPR 153
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T KLFV GLS YT+E L AF +G++VE KI+MD+ RSKG+ F+ Y +E+ A AL
Sbjct: 38 TTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKAL 97
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSRGRP 273
EMNGK +NG +I VD AK + G P
Sbjct: 98 DEMNGKALNGRVIYVDYAKLKTNFGGGIP 126
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 60/76 (78%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LF+ GLSF T+E++LR+AFE FG+L EV ++MD+++KR +G+AF+ Y EE + A++ M
Sbjct: 118 LFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEEESKNAMEGM 177
Query: 248 NGKIINGWMIVVDVAK 263
+GK ++G +I V+VAK
Sbjct: 178 HGKFLDGRVIFVEVAK 193
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 61/77 (79%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L+V+GLSF T+E++LR F+ FG+LV+V ++MDK++ R +G+AF+ Y TEE + A++
Sbjct: 95 RLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEG 154
Query: 247 MNGKIINGWMIVVDVAK 263
M+GK ++G +I V+VAK
Sbjct: 155 MHGKFLDGRVIFVEVAK 171
>gi|255641220|gb|ACU20887.1| unknown [Glycine max]
Length = 116
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 60/97 (61%)
Query: 81 MDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELT 140
MD PG TK QM+D Y Q L KVLG+E++A+ IY+VS + FGF CE+D+E + +L
Sbjct: 1 MDHPGGEGATKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLE 60
Query: 141 GVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSE 177
G+PGVL V PD ENKDYG N + S E
Sbjct: 61 GLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPE 97
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 36 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDY 81
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%)
Query: 163 GNNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKI 222
G + +SM + A+ + T KLFV+GLS T+++ L+ AF FG ++E K++ D++
Sbjct: 40 GPSPPSSMFGDGTEVANVPPLTTPKLFVSGLSRLTTDEKLQGAFAPFGRILEAKVVTDRV 99
Query: 223 SKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
S RSKG+ F+ Y T E A A +EMN K ++GW+I VD AK
Sbjct: 100 SGRSKGFGFVRYATIEEAEKARQEMNAKFLDGWVIFVDPAK 140
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 61/77 (79%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L+V+GLSF T+E++LR AFE FG+L EV ++M++++KR +G+AF+ Y +EE + A++
Sbjct: 68 RLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEG 127
Query: 247 MNGKIINGWMIVVDVAK 263
M GK ++G +I V+VA+
Sbjct: 128 MQGKFLDGRVIFVEVAR 144
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 61/77 (79%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L+V+GLSF T+E++LR AFE FG+L EV ++M++++KR +G+AF+ Y +EE + A++
Sbjct: 71 RLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEG 130
Query: 247 MNGKIINGWMIVVDVAK 263
M GK ++G +I V+VA+
Sbjct: 131 MQGKFLDGRVIFVEVAR 147
>gi|356505124|ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 139
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 161 YGGNNLQNSMVPSDSSEAS---PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKI 217
YG L S AS + + + KLFV+GLS T ++ L+ AF FG+LVE K+
Sbjct: 5 YGAQRLLRHTPLVHSHYASIRLSSTLTSPKLFVSGLSRLTKDENLKEAFSSFGQLVEAKV 64
Query: 218 IMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
I D+ S RSKG+AF+ YTT E A A + MN K ++GW+I VD AK
Sbjct: 65 ITDRASGRSKGFAFVTYTTIEEAERAREGMNAKFLDGWVIFVDPAK 110
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ T LFV+GLS T+++ L+ AF FG L+E K++ D++S RSKG+ F+ Y T E A
Sbjct: 57 LTTPNLFVSGLSRLTTDEKLQGAFAPFGRLLEAKVVTDRVSGRSKGFGFVRYATIEEAER 116
Query: 243 ALKEMNGKIINGWMIVVDVAKTTPKYSRGRPR 274
A +EMN K ++GW+I VD AK P+ + P+
Sbjct: 117 ARQEMNAKFLDGWVIFVDPAK--PRQPKPAPQ 146
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV G+SF T+EKTL AF FGE+VE KIIMDK R KG+A++ +T E+ A AL EM
Sbjct: 36 LFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKALTEM 95
Query: 248 NGKIINGWMIVVDVA 262
NGK+++G ++VD A
Sbjct: 96 NGKVVDGRTVLVDYA 110
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
++ + KLFV GLS+ T +++LR AF FGE+V+ K+I+D+ + RS+G+ F+ + E AAS
Sbjct: 31 RLMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFNDEGAAS 90
Query: 242 AALKEMNGKIINGWMIVVDVAKTTPKYSR 270
AA+ EM+GK +NG I V+VA P R
Sbjct: 91 AAISEMDGKDLNGRNIRVNVANERPSAPR 119
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSFYT++K L AF +G++VE I+ D++ RSKG+ F+ + +E+ A AL E
Sbjct: 32 KLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAHNALSE 91
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK +NG +I VD AK
Sbjct: 92 MNGKTLNGRVIYVDYAK 108
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 8/100 (8%)
Query: 166 LQNSMVPS--DSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKIS 223
LQ+ P+ +S+ SP KLFV+GLS T+++ L+ AF FG+L+E K+I D++S
Sbjct: 18 LQSQFSPARFNSTVTSP------KLFVSGLSRLTTDEKLKEAFSPFGQLLEAKVITDRVS 71
Query: 224 KRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
RSKG+ F+ YTT E A A + MN K ++GW+I VD AK
Sbjct: 72 GRSKGFGFVTYTTLEEAEKAREGMNAKFLDGWVIFVDPAK 111
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 58/80 (72%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T KLF+ GLS + +E TL AF +G+++E I+ DK++ RSKG+ F+++ +EE A+ A
Sbjct: 35 THKLFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKAR 94
Query: 245 KEMNGKIINGWMIVVDVAKT 264
EMNGK++NG +I VD+AK
Sbjct: 95 DEMNGKVLNGRVIYVDIAKA 114
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 169 SMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKG 228
S+ P S S I TK LFV GLS+YT++K L AF +G+++E ++MD++S +SKG
Sbjct: 19 SLFPPPSRLVSFRAIATK-LFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKG 77
Query: 229 YAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
+ F+ + + + A AL EMNGK +NG +I V+ AK T SRG
Sbjct: 78 FGFVTFASLDEAHTALSEMNGKPLNGRVIFVNYAKPTTS-SRG 119
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 56/77 (72%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSFYT+E L AF +G+++E KI+ D++S RSKG+ F+ + +++ A A+++
Sbjct: 30 KLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIED 89
Query: 247 MNGKIINGWMIVVDVAK 263
M GK +NG +I VD AK
Sbjct: 90 MKGKTLNGRVIFVDYAK 106
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 169 SMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKG 228
S+ P S S I TK LFV GLS+YT++K L AF +G+++E ++MD++S +SKG
Sbjct: 19 SLFPPPSRLVSYRGIATK-LFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKG 77
Query: 229 YAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
+ F+ + + + A AL EMNGK +NG +I V+ AK T SRG
Sbjct: 78 FGFVTFASLDEAHTALSEMNGKPLNGRVIFVNYAKPTTS-SRG 119
>gi|388519245|gb|AFK47684.1| unknown [Lotus japonicus]
Length = 138
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
T + T KLF++GLS T+++ L AF FG+L+E K+I D+ S RSKG+ F+ Y + E A
Sbjct: 26 TTLTTPKLFISGLSRQTTDRKLNEAFAPFGQLIEAKVITDRASGRSKGFGFVSYASIEEA 85
Query: 241 SAALKEMNGKIINGWMIVVDVAK 263
A K MN K ++GW+I VD AK
Sbjct: 86 EKAGKGMNAKFLDGWVIFVDPAK 108
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
Query: 163 GNNLQNSMVPSD-----SSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKI 217
G L+ ++ PS +S ++ + KLFV GLS+ T +++LR AF FGE+V+ K+
Sbjct: 8 GGLLRQTITPSGGNVPVTSMLGSLRLMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKV 67
Query: 218 IMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
I+D+ + RS+G+ F+ ++ E AASAA+ EM+GK +NG I V+ A P R
Sbjct: 68 IVDRETGRSRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNQANDRPSAPR 120
>gi|357112848|ref|XP_003558218.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 168
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ T KLFV+GLS T+++ L+ AF FG+++E K+I D+IS RSKG+ F+ Y + + A A
Sbjct: 59 LTTPKLFVSGLSRLTTDEKLKNAFIPFGQVLEAKVITDRISGRSKGFGFVRYVSLQEAEA 118
Query: 243 ALKEMNGKIINGWMIVVDVAKTTPKYSRGRPR 274
A + MN K ++GW+I VD AK P+ + P+
Sbjct: 119 ARQGMNAKFLDGWVIFVDPAK--PREQKPAPQ 148
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 163 GNNLQNSMVPSD-----SSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKI 217
G L+ ++ PS +S ++ + KLFV GLS+ T + +LR AF FGE+V+ K+
Sbjct: 8 GGLLRQNITPSGGNVPVTSMLGSLRLMSTKLFVGGLSWGTDDASLRDAFAHFGEVVDAKV 67
Query: 218 IMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
I+D+ + RS+G+ F+ ++ E AASAA+ EM+GK +NG I V+ A P R
Sbjct: 68 IVDRETGRSRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNPANDRPSAPR 120
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 163 GNNLQNSMVPSDSSEASPTQ-IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDK 221
GN L+ ++ P+ S P + + + KLFV GLSF T E TL+ AF FG ++E +II+D+
Sbjct: 8 GNALRRTLAPTCSPLLQPVRCMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDR 67
Query: 222 ISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
S RS+G+ FI +T+ E ASAA+ M+GK + G I V+ A
Sbjct: 68 ESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHAN 109
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 163 GNNLQNSMVPSDSSEASPTQ-IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDK 221
GN L+ ++ P+ S P + + + KLFV GLSF T E TL+ AF FG ++E +II+D+
Sbjct: 8 GNALRRTLAPTCSPLLQPVRCMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDR 67
Query: 222 ISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
S RS+G+ FI +T+ E ASAA+ M+GK + G I V+ A
Sbjct: 68 ESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHAN 109
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 57/77 (74%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF++GLS T+++ LR AF FG+LV+ K++ D+ + RSKG+AF+ Y+T + A A +E
Sbjct: 41 KLFISGLSRLTTDEKLREAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREE 100
Query: 247 MNGKIINGWMIVVDVAK 263
MN K ++GW+I VD AK
Sbjct: 101 MNAKFLDGWVIFVDPAK 117
>gi|351724829|ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
gi|255628209|gb|ACU14449.1| unknown [Glycine max]
Length = 139
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ + + KLFV+GL T ++ L+ AF FG+LVE K+I+D+ S RSKG+AF+ YTT E A
Sbjct: 28 STLTSPKLFVSGLCRLTIDEKLKEAFSSFGQLVEAKVIIDRASGRSKGFAFVTYTTIEEA 87
Query: 241 SAALKEMNGKIINGWMIVVDVAK 263
A + MN K ++GW+I VD AK
Sbjct: 88 EKAREGMNAKFLDGWVIFVDPAK 110
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 162 GGNNLQNSMVPSDSSEASPTQIK--TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIM 219
GG +L+ + + S+ TQ + KLFV GLSF T+E+ L AF G++VE +I+M
Sbjct: 8 GGRHLKFVGLINSSASCFFTQRRGVASKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVM 67
Query: 220 DKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
D++S RSKG+ F+ + + + A AL E NG+ NG +I VD AK + GR
Sbjct: 68 DRVSDRSKGFGFVTFASVDEAQKALMEFNGQQFNGRVIFVDYAKAKQSFGGGR 120
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T +LF+ GLS + +E +L AF +G+++E I+ DK++ R KG+ F+++ +EEAA+ A
Sbjct: 36 TYRLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAK 95
Query: 245 KEMNGKIINGWMIVVDVAK 263
+EMNGK++NG +I VD+AK
Sbjct: 96 EEMNGKVLNGRVIYVDIAK 114
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 56/79 (70%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T KLF++GLS T+++ LRA F FG+LVE +++ D+IS RS+G+ F+ Y T E A+
Sbjct: 43 TTKLFISGLSRQTTDEGLRAKFSEFGQLVEARVVTDRISGRSRGFGFVRYATLEDAAKGK 102
Query: 245 KEMNGKIINGWMIVVDVAK 263
+ M+GK ++GW+I D AK
Sbjct: 103 EGMDGKFLDGWVIFADFAK 121
>gi|357144631|ref|XP_003573360.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
distachyon]
Length = 229
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 76 TILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 135
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C +D+E +++ G+PGVL V PD +NKDYGG+ N ++P P + +
Sbjct: 136 GFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKERR 195
Query: 185 TKK 187
T K
Sbjct: 196 TSK 198
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDEETS + LPGVL V PD + KDY
Sbjct: 126 MYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 171
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Query: 166 LQNSMVPSDSSEASPTQIKTK----KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDK 221
L++S P SS + ++ + KLF++GLS T+++ L AF FG+L+E K+I D+
Sbjct: 11 LRHSQSPLVSSHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQLLEAKVITDR 70
Query: 222 ISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
S RSKG+AF+ Y+T E A A + MN K ++GW+I VD AK
Sbjct: 71 GSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIFVDPAK 112
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFVTGLS+ T+E LR AF GE++EVK+I D ++ +S+GY F+ + +E A+AA
Sbjct: 57 STKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAAAR 116
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYS 269
KEMNG+I++G I V A + S
Sbjct: 117 KEMNGQILDGRRIRVSYAHKGERLS 141
>gi|242080505|ref|XP_002445021.1| hypothetical protein SORBIDRAFT_07g002970 [Sorghum bicolor]
gi|241941371|gb|EES14516.1| hypothetical protein SORBIDRAFT_07g002970 [Sorghum bicolor]
Length = 225
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 71 TILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 130
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C +D+E +++ G+PGVL V PD +NKDYGG+ N ++P P + +
Sbjct: 131 GFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKERR 190
Query: 185 TKK 187
T K
Sbjct: 191 TSK 193
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDEETS + LPGVL V PD + KDY
Sbjct: 121 MYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 166
>gi|218200449|gb|EEC82876.1| hypothetical protein OsI_27756 [Oryza sativa Indica Group]
Length = 229
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 75 TILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 134
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C +D+E +++ G+PGVL V PD +NKDYGG+ N ++P P + +
Sbjct: 135 GFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKERR 194
Query: 185 TKK 187
T K
Sbjct: 195 TSK 197
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDEETS + LPGVL V PD + KDY
Sbjct: 125 MYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 170
>gi|223947571|gb|ACN27869.1| unknown [Zea mays]
gi|223973925|gb|ACN31150.1| unknown [Zea mays]
gi|413917475|gb|AFW57407.1| DAG protein isoform 1 [Zea mays]
gi|413917476|gb|AFW57408.1| DAG protein isoform 2 [Zea mays]
Length = 223
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 66 TILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 125
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C +D+E +++ G+PGVL V PD +NKDYGG+ N ++P P + +
Sbjct: 126 GFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQPKERR 185
Query: 185 TKK 187
T K
Sbjct: 186 TSK 188
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDEETS + LPGVL V PD + KDY
Sbjct: 116 MYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 161
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
Query: 163 GNNLQNSMVPSD-----SSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKI 217
G L+ ++ PS +S ++ + KLFV GLS+ T + +LR AF FGE+V+ K+
Sbjct: 8 GGLLRQNITPSGGNVPVTSMLGSLRLMSTKLFVGGLSWGTDDASLRDAFAHFGEVVDAKV 67
Query: 218 IMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
I+D+ + R +G+ F+ ++ E AASAA+ EM+GK +NG I V+ A P R
Sbjct: 68 IVDRETGRPRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNPANDRPSAPR 120
>gi|115474737|ref|NP_001060965.1| Os08g0139100 [Oryza sativa Japonica Group]
gi|38636775|dbj|BAD03018.1| putative DAG protein [Oryza sativa Japonica Group]
gi|113622934|dbj|BAF22879.1| Os08g0139100 [Oryza sativa Japonica Group]
gi|125602139|gb|EAZ41464.1| hypothetical protein OsJ_25987 [Oryza sativa Japonica Group]
gi|215692500|dbj|BAG87920.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737779|dbj|BAG96909.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 229
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 75 TILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 134
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C +D+E +++ G+PGVL V PD +NKDYGG+ N ++P P + +
Sbjct: 135 GFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKERR 194
Query: 185 TKK 187
T K
Sbjct: 195 TSK 197
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDEETS + LPGVL V PD + KDY
Sbjct: 125 MYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 170
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
Query: 166 LQNSMVPSDSSE-ASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISK 224
L NS V S+E A P+ KLFV+GLS T+++ LR AF FG ++E +++ DK++
Sbjct: 30 LNNSAVRGMSTEPADPSP----KLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNG 85
Query: 225 RSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTP 266
SKG+AF+ Y T+E A + M+GK ++GW+I D A+ P
Sbjct: 86 VSKGFAFVRYATQEEADKGKEGMDGKFLDGWVIFADYARPRP 127
>gi|343172728|gb|AEL99067.1| putative plastid developmental protein, partial [Silene latifolia]
gi|343172730|gb|AEL99068.1| putative plastid developmental protein, partial [Silene latifolia]
Length = 171
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 43 SVKKDYSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQIL 102
S DYS +N N + T++ P HWL+ M+ P T+ QM+D Y L
Sbjct: 13 SATNDYSAKRSSSNN--NGEQRETIMLPGCDYNHWLIVMEFPKDPSPTREQMIDTYLDTL 70
Query: 103 TKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYG 162
VLG+ ++A+ +Y S + GF C +D+E +++ G+PGVL V PD +NKDYG
Sbjct: 71 ATVLGSMEEAKKNMYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYG 130
Query: 163 GNNLQNSMV 171
G+ N +
Sbjct: 131 GDKYVNGEI 139
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDEETS + LPGVL V PD + KDY
Sbjct: 84 MYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 129
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 8/103 (7%)
Query: 176 SEASPTQIKT--------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSK 227
+E +P ++KT K LFV LS+ E LR FE FGE+ V+++ D+ S RSK
Sbjct: 284 AEPTPKKVKTVSSAQEGAKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSK 343
Query: 228 GYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
G+ ++EYTT EAA AL+EM GK I+G I VD + P+ R
Sbjct: 344 GFGYVEYTTNEAAKKALEEMKGKDIDGRTINVDFSAPRPENPR 386
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV LSF E+ ++ FEGFG +V ++I D S + KG+ +I+Y ++A A++EM
Sbjct: 404 VFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAVEEM 463
Query: 248 NGKIINGWMIVVDVAKTTPK 267
NG ++ G I D +TP+
Sbjct: 464 NGALVAGRAIRTDF--STPR 481
>gi|326502812|dbj|BAJ99034.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524846|dbj|BAK04359.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 228
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 75 TILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 134
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNS-MVPSDSSEASPTQIK 184
GF C +D+E +++ G+PGVL V PD +NKDYGG+ N ++P P + +
Sbjct: 135 GFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKERR 194
Query: 185 TKK 187
T K
Sbjct: 195 TSK 197
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDEETS + LPGVL V PD + KDY
Sbjct: 125 MYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 170
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 58/84 (69%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ GLS+ +++L+ AF GFG++V+ K+I D+ S RS+G+ F+ ++ +E+AS+
Sbjct: 33 MSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASS 92
Query: 243 ALKEMNGKIINGWMIVVDVAKTTP 266
AL M+GK +NG I V A P
Sbjct: 93 ALSAMDGKDLNGRSIRVSYANDKP 116
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
KKLFV GLSF T+EK LR AF +GE++EV++I+++ S SKG+ F+++ +E A ALK
Sbjct: 35 KKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNALK 94
Query: 246 EMNGKIINGWMIVVDVAKTTPKYSRGRPR 274
EM+G+ ++G I V+ A T + P+
Sbjct: 95 EMDGQSLDGRNIRVNFANTRARQDSAPPK 123
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 162 GGNNLQNSMVPSDSSEASPTQIK--TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIM 219
GG +L++ + + S+ TQ + KLF+ GLSF T+E+ L AF G++VE +I+M
Sbjct: 8 GGRHLKSVCLINSSASCFFTQRRGVASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVM 67
Query: 220 DKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
D++S RSKG+ F+ + + + A AL E NG+ +NG I VD AK
Sbjct: 68 DRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFVDYAK 111
>gi|116782406|gb|ABK22494.1| unknown [Picea sitchensis]
Length = 178
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L+V+GLS+YT+E++LR AF FG LVE I+MD+++KRS+G+AF+ Y EE A AA+K M
Sbjct: 84 LYVSGLSYYTTEQSLRNAFSSFGNLVEATIVMDRVTKRSRGFAFLRYAYEEEAEAAIKGM 143
Query: 248 NGKIINGWMIVVDVAKTTPKYSRGRP 273
+GK ++G +I V+ +K P RG P
Sbjct: 144 HGKFLDGRVIFVEYSK-LPSELRGAP 168
>gi|18415425|ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|51971865|dbj|BAD44597.1| putative protein [Arabidopsis thaliana]
gi|107738041|gb|ABF83619.1| At4g20030 [Arabidopsis thaliana]
gi|332658864|gb|AEE84264.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 152
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
K+ V L F TSE L+ F FGE+ EVK+I D+ KRSKGYAFI++T+++ A A++
Sbjct: 41 KIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIET 100
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
M+ ++ NG MI +D+AK + +G PR
Sbjct: 101 MDRRMYNGRMIYIDIAKPGKRDFQGLPR 128
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ GL++ T E TLR AF FG + EVKII+D+ + RS+G+ F+ +T+ E A
Sbjct: 42 MSSSKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEV 101
Query: 243 ALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
AL+EM+G+ + G I VD A + +RG
Sbjct: 102 ALQEMDGRELAGRQIRVDYATDKARETRG 130
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
N VP S S ++ + KLF+ GLS+ T + +LR AF FG++V+ K+I+D+ + RS
Sbjct: 17 SNGNVPVTSMLGS-LRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRS 75
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
+G+ F+ + E AA+AA+ EM+GK +NG I V+ A P R
Sbjct: 76 RGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 119
>gi|297804134|ref|XP_002869951.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
gi|297315787|gb|EFH46210.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
K+ V L F TSE L+ F FGE+ EVK+I D+ KRSKGYAFI++T+++ A A++
Sbjct: 41 KIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIRDESMKRSKGYAFIQFTSQDDAFLAIET 100
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
M+ ++ NG MI +D+AK + +G PR
Sbjct: 101 MDRRMYNGRMIYIDIAKPGKRDFQGLPR 128
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
N VP S S ++ + KLF+ GLS+ T + +LR AF FG++V+ K+I+D+ + RS
Sbjct: 17 SNGNVPVTSMLGS-LRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRS 75
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
+G+ F+ + E AA+AA+ EM+GK +NG I V+ A P R
Sbjct: 76 RGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 119
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
N VP S S ++ + KLF+ GLS+ T + +LR AF FG++V+ K+I+D+ + RS
Sbjct: 17 SNGNVPVTSMLGS-LRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRS 75
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
+G+ F+ + E AA+AA+ EM+GK +NG I V+ A P R
Sbjct: 76 RGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 119
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
N VP S S ++ + KLF+ GLS+ T + +LR AF FG++V+ K+I+D+ + RS
Sbjct: 17 SNGNVPVTSMLGS-LRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRS 75
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
+G+ F+ + E AA+AA+ EM+GK +NG I V+ A P R
Sbjct: 76 RGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 119
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 60/83 (72%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLF+ G+S+ T E++LR AF +GE+V+ +IIMD+ + RS+G+ FI YT+ E AS+A+
Sbjct: 41 STKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAI 100
Query: 245 KEMNGKIINGWMIVVDVAKTTPK 267
+ ++G+ ++G I V+ A P+
Sbjct: 101 QALDGQDLHGRPIRVNYANERPR 123
>gi|224114213|ref|XP_002316698.1| predicted protein [Populus trichocarpa]
gi|118485898|gb|ABK94795.1| unknown [Populus trichocarpa]
gi|222859763|gb|EEE97310.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 75 TILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 134
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C +D+ +++ G+PGVL V PD +NKDYGG+ N ++P P Q
Sbjct: 135 GFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQPKQRT 194
Query: 185 TKK 187
T K
Sbjct: 195 TSK 197
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDE TS + LPGVL V PD + KDY
Sbjct: 125 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDY 170
>gi|297843972|ref|XP_002889867.1| hypothetical protein ARALYDRAFT_471280 [Arabidopsis lyrata subsp.
lyrata]
gi|297335709|gb|EFH66126.1| hypothetical protein ARALYDRAFT_471280 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T++ P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 79 TIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 138
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQ 182
GF C +D+E +++ G+PGVL V PD +NKDYGG+ N ++P P Q
Sbjct: 139 GFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKQ 196
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C +DEETS + LPGVL V PD + KDY
Sbjct: 129 MYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 174
>gi|297793541|ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310490|gb|EFH40914.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 58/79 (73%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T +LFV+ LS YT++++LR F FG+++E ++I D+ ++R KG+ FI + +E+ A AL
Sbjct: 6 TTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNAL 65
Query: 245 KEMNGKIINGWMIVVDVAK 263
K +NGKI+NG +I V+ AK
Sbjct: 66 KALNGKIVNGRLIFVEAAK 84
>gi|21554348|gb|AAM63455.1| unknown [Arabidopsis thaliana]
Length = 152
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
K+ V L F TSE L+ F FGE+ EVK+I D+ +RSKGYAFI++T+++ A A++
Sbjct: 41 KIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAIET 100
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
M+ ++ NG MI +D+AK + +G PR
Sbjct: 101 MDRRMYNGRMIYIDIAKPGKRDFQGLPR 128
>gi|194466189|gb|ACF74325.1| unknown [Arachis hypogaea]
Length = 112
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L VTGLS+ T+E LR AFE GEL+EVK+I D ++ +SKGY F+ +TTE +A+ KEM
Sbjct: 34 LLVTGLSYDTNETVLRDAFEQHGELIEVKVICDHVTGKSKGYGFVRFTTETSAATGRKEM 93
Query: 248 NGKIINGWMIVV 259
+ KII+G I V
Sbjct: 94 HKKIIDGRRIRV 105
>gi|255581040|ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis]
Length = 144
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+LFV+GLS T+++ L+ AF FG+LV+ K+I+D+ S RSKG+ FI Y T E A A +
Sbjct: 37 RLFVSGLSRLTTDEKLKEAFSPFGQLVDAKVIIDRASGRSKGFGFITYATIEEAEKAREG 96
Query: 247 MNGKIINGWMIVVDVAK 263
MN K ++GW+I VD AK
Sbjct: 97 MNAKFLDGWVIFVDPAK 113
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 60/85 (70%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV G+SF T + +L+ AF+ +G +VE +IIMD+ + RS+G+ F+ YT+ E AS+
Sbjct: 37 MSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASS 96
Query: 243 ALKEMNGKIINGWMIVVDVAKTTPK 267
A++ ++G+ ++G + V+ A P+
Sbjct: 97 AIQALDGQDLHGRRVRVNYATERPQ 121
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 60/89 (67%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
++ + KLF+ GLS+ T + +LR AF FG++V+ K+I+D+ + RS+G+ F+ + E AA+
Sbjct: 12 RLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAAT 71
Query: 242 AALKEMNGKIINGWMIVVDVAKTTPKYSR 270
AA+ EM+GK +NG I V+ A P R
Sbjct: 72 AAISEMDGKELNGRHIRVNPANDRPSAPR 100
>gi|255625841|gb|ACU13265.1| unknown [Glycine max]
Length = 221
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%)
Query: 60 NSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHV 119
N++ T++ P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y
Sbjct: 63 NNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLDTLATVLGSMEEAKKNMYAF 122
Query: 120 SWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
S + GF C +D+ +++ G+PGVL V PD + +NKDYGG+ N +
Sbjct: 123 STTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSHIDVKNKDYGGDKYINGEI 174
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDE TS + LPGVL V PD + KDY
Sbjct: 119 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSHIDVKNKDY 164
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 60/83 (72%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLF+ G+S+ T E++LR AF +GE+V+ +IIMD+ + RS+G+ FI YT+ E AS+A+
Sbjct: 41 STKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAI 100
Query: 245 KEMNGKIINGWMIVVDVAKTTPK 267
+ ++G+ ++G I V+ A P+
Sbjct: 101 QALDGQDLHGRPIRVNYANERPR 123
>gi|356526775|ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 146
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 56/83 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFVTGLS+ T+E LR AF GE++EVK+I D ++ +S+GY F+ + +E A+A KE
Sbjct: 59 KLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSETIAAATHKE 118
Query: 247 MNGKIINGWMIVVDVAKTTPKYS 269
MNG+I++G I V A + S
Sbjct: 119 MNGQILDGRCIRVSYAHKGERLS 141
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
N VP S S ++ + KLF+ GLS+ T + +LR AF FG++V+ K+I+D+ + RS
Sbjct: 17 SNGNVPVTSMLGS-LRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRS 75
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTP 266
+G+ F+ + E AA+AA+ EM+GK +NG I V+ A P
Sbjct: 76 RGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRP 115
>gi|6014904|sp|Q38732.1|DAG_ANTMA RecName: Full=DAG protein, chloroplastic; Flags: Precursor
gi|1200205|emb|CAA65064.1| DAG [Antirrhinum majus]
Length = 230
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T++ P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 78 TIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 137
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C + +E +++ G+PGVL V PD +NKDYGG+ N ++P P Q +
Sbjct: 138 GFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPKQSR 197
Query: 185 TKK 187
+ K
Sbjct: 198 SSK 200
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C V EETS + LPGVL V PD + KDY
Sbjct: 128 MYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDY 173
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 58/84 (69%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ GLS+ +++L+ AF GFG++V+ K+I D+ S RS+G+ F+ ++ +E+AS+
Sbjct: 33 MSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASS 92
Query: 243 ALKEMNGKIINGWMIVVDVAKTTP 266
AL M+GK ++G I V A P
Sbjct: 93 ALSAMDGKDLDGRSIRVSYANDRP 116
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 60/83 (72%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLF+ G+S+ T E++LR AF +GE+V+ +IIMD+ + RS+G+ FI YT+ E AS+A+
Sbjct: 41 STKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAI 100
Query: 245 KEMNGKIINGWMIVVDVAKTTPK 267
+ ++G+ ++G I V+ A P+
Sbjct: 101 QALDGQDLHGRPIRVNYANERPR 123
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ +LFV G+SF ++ ++L AF FGE+VEV II DK R KGYA++ + TE A AL
Sbjct: 33 SSRLFVKGISFSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAYVTFATENEAKKAL 92
Query: 245 KEMNGKIINGWMIVVD 260
EMNGK+I+G + VD
Sbjct: 93 TEMNGKVIDGRPVFVD 108
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 64/104 (61%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
Q+S P S + + KLF+ GLS+ +++L+ AF +GE+VE ++I D+ + RS
Sbjct: 17 QSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRS 76
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
+G+ F+ +T++E+A++AL M+G+ +NG I V A P R
Sbjct: 77 RGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRPSAPR 120
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV GLS+ T + +LR F +G+++E KII+D+ S RS+G+ FI YT+ E ASA
Sbjct: 31 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASA 90
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ M+GK ++G I V+ A
Sbjct: 91 AITAMDGKTLDGRNIRVNHA 110
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV GLS+ T + +LR F +G+++E KII+D+ S RS+G+ FI YT+ E ASA
Sbjct: 28 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASA 87
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ M+GK ++G I V+ A
Sbjct: 88 AITAMDGKTLDGRNIRVNHA 107
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%)
Query: 164 NNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKIS 223
N L+ + V S+ S + + KLFV GLS+ T + TL+ F +G+++E +II+D+ +
Sbjct: 9 NALRRTSVSSNPSLLQAVRCMSSKLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDT 68
Query: 224 KRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
+SKGY FI YT+ E A+AA+ M+GK + G ++ V A
Sbjct: 69 GKSKGYGFITYTSSEEAAAAVTAMDGKDLQGRIVRVSTAN 108
>gi|413917477|gb|AFW57409.1| hypothetical protein ZEAMMB73_570539 [Zea mays]
Length = 175
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 66 TILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 125
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQ 167
GF C +D+E +++ G+PGVL V PD +NKDYGG Q
Sbjct: 126 GFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGEPQQ 167
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDEETS + LPGVL V PD + KDY
Sbjct: 116 MYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 161
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 169 SMVPSDSSEA--SPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
S V + SS A + ++ + KLFV GLS+ + LR AF GFG++ E ++I D+ + +S
Sbjct: 18 SGVAASSSPAVFNAARLMSTKLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKS 77
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
+G+ F+ YT+ +AA+AA+ M+GK I+G + V++A P +R
Sbjct: 78 RGFGFVNYTSSDAANAAISGMDGKEIDGRPVRVNIANDRPAGNR 121
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 62/87 (71%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + K+FV G+S+ T + +LR AF +GE++E ++I+D+ + RS+G+AF+ YT+ E AS+
Sbjct: 37 MSSSKVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASS 96
Query: 243 ALKEMNGKIINGWMIVVDVAKTTPKYS 269
A++ ++G+ ++G + V+ A P+ S
Sbjct: 97 AIQALDGQDLHGRRVRVNYANDRPRTS 123
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 14/120 (11%)
Query: 163 GNNLQNSMVP---SDSSEASPT------QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELV 213
GN L+NS V D S ++P+ + + KLFV G+S+ T + +LR +F +GE++
Sbjct: 8 GNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEVI 67
Query: 214 EVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRGRP 273
+VK+IMD+ + RS+G+ F+ + T E AS+A++ M+G+ ++G I V+ A R RP
Sbjct: 68 DVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYAT-----ERSRP 122
>gi|356554919|ref|XP_003545788.1| PREDICTED: DAG protein, chloroplastic [Glycine max]
Length = 222
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%)
Query: 60 NSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHV 119
N++ T++ P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y
Sbjct: 63 NNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLDTLATVLGSMEEAKKNMYAF 122
Query: 120 SWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
S + GF C +D+ +++ G+PGVL V PD +NKDYGG+ N +
Sbjct: 123 STTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEI 174
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDE TS + LPGVL V PD + KDY
Sbjct: 119 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDY 164
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 14/120 (11%)
Query: 163 GNNLQNSMVP---SDSSEASPT------QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELV 213
GN L+NS V D S ++P+ + + KLFV G+S+ T + +LR +F +GE++
Sbjct: 8 GNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEVI 67
Query: 214 EVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRGRP 273
+VK+IMD+ + RS+G+ F+ + T E AS+A++ M+G+ ++G I V+ A R RP
Sbjct: 68 DVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYAT-----ERSRP 122
>gi|226501318|ref|NP_001151266.1| DAG protein [Zea mays]
gi|195645398|gb|ACG42167.1| DAG protein [Zea mays]
Length = 223
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 66 TILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 125
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C +D+E +++ G+ GVL V PD +NKDYGG+ N ++P P + +
Sbjct: 126 GFQCTVDEETSEKFKGLXGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQPKERR 185
Query: 185 TKK 187
T K
Sbjct: 186 TSK 188
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDEETS + L GVL V PD + KDY
Sbjct: 116 MYAFSTTTYTGFQCTVDEETSEKFKGLXGVLWVLPDSYIDVKNKDY 161
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ +TLR AF+ FGE+V +++ D++S SKG+ F++Y T E A+ ++ M
Sbjct: 53 LFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGM 112
Query: 248 NGKIINGWMIVVDVAKTTP 266
+GK + GW+I + A+ P
Sbjct: 113 DGKFLEGWVIFAEYARPRP 131
>gi|21593052|gb|AAM65001.1| DAG protein, putative [Arabidopsis thaliana]
Length = 232
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T++ P HWL+ M+ P ++ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 79 TIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 138
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
GF C +D+E +++ G+PGVL V PD +NKDYGG+ N +
Sbjct: 139 GFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEI 184
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C +DEETS + LPGVL V PD + KDY
Sbjct: 129 MYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 174
>gi|255629093|gb|ACU14891.1| unknown [Glycine max]
Length = 225
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 47 DYSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVL 106
D+S SN N+ T++ P HWL+ M+ P T+ QM+D Y L VL
Sbjct: 55 DFSAKRSSSSN--NNDQRETIMLPGCGYNHWLIVMEFPKDPAPTREQMIDTYLDTLATVL 112
Query: 107 GNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNL 166
G+ ++A+ +Y S + GF C +D+ +++ G+PGVL V PD +NKDYGG+
Sbjct: 113 GSMEEAKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY 172
Query: 167 QNSMV 171
N +
Sbjct: 173 INGEI 177
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDE TS + LPGVL V PD + KDY
Sbjct: 122 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDY 167
>gi|15220382|ref|NP_172610.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
gi|6554182|gb|AAF16628.1|AC011661_6 T23J18.10 [Arabidopsis thaliana]
gi|26450103|dbj|BAC42171.1| unknown protein [Arabidopsis thaliana]
gi|28827520|gb|AAO50604.1| putative DAG protein [Arabidopsis thaliana]
gi|332190614|gb|AEE28735.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
Length = 232
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T++ P HWL+ M+ P ++ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 79 TIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 138
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
GF C +D+E +++ G+PGVL V PD +NKDYGG+ N +
Sbjct: 139 GFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEI 184
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C +DEETS + LPGVL V PD + KDY
Sbjct: 129 MYAFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 174
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 71/114 (62%), Gaps = 9/114 (7%)
Query: 163 GNNLQ---NSMVPSDSSEASPTQ------IKTKKLFVTGLSFYTSEKTLRAAFEGFGELV 213
GN L+ N + S+ S + P+ + + K+F+ G+SF T + L+ AF+ +G +V
Sbjct: 8 GNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVV 67
Query: 214 EVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPK 267
E +IIMD+ + RS+G+ F+ YT+ E AS+A++ M+G+ ++G + V+ A P+
Sbjct: 68 EARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATERPQ 121
>gi|358249206|ref|NP_001240266.1| uncharacterized protein LOC100788853 [Glycine max]
gi|255646717|gb|ACU23832.1| unknown [Glycine max]
Length = 225
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 47 DYSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVL 106
D+S SN N+ T++ P HWL+ M+ P T+ QM+D Y L VL
Sbjct: 55 DFSAKRSSSSN--NNDQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLDTLATVL 112
Query: 107 GNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNL 166
G+ ++A+ +Y S + GF C +D+ +++ G+PGVL V PD +NKDYGG+
Sbjct: 113 GSMEEAKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKY 172
Query: 167 QNSMV 171
N +
Sbjct: 173 INGEI 177
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDE TS + LPGVL V PD + KDY
Sbjct: 122 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDY 167
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T KLFV GLS + +E++L AF +G+++E ++ DK++ KG+ F+++ + E A+ A
Sbjct: 34 TYKLFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKVTDIPKGFGFVKFASPEEANNAR 93
Query: 245 KEMNGKIINGWMIVVDVAKTTP 266
+EMNGK +NG +I VD+AK P
Sbjct: 94 EEMNGKALNGRVIYVDIAKAKP 115
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T + +LR F +GE++E +II+D+ S RS+G+ F+ YT+ E ASAA+
Sbjct: 29 SSKLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 245 KEMNGKIINGWMIVVDVA 262
M+GK ++G I V+ A
Sbjct: 89 TAMDGKTLDGRSIRVNHA 106
>gi|225461197|ref|XP_002283211.1| PREDICTED: DAG protein, chloroplastic isoform 1 [Vitis vinifera]
gi|359493924|ref|XP_003634693.1| PREDICTED: DAG protein, chloroplastic isoform 2 [Vitis vinifera]
Length = 229
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T++ P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 75 TIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 134
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C + +E +++ G+PGVL V PD +NKDYGG+ N ++P P Q +
Sbjct: 135 GFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKQRR 194
Query: 185 TKK 187
K
Sbjct: 195 ESK 197
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C V EETS + LPGVL V PD + KDY
Sbjct: 125 MYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDY 170
>gi|2827657|emb|CAA16611.1| putative protein [Arabidopsis thaliana]
gi|7268798|emb|CAB79003.1| putative protein [Arabidopsis thaliana]
Length = 115
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 193 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKII 252
L F TSE L+ F FGE+ EVK+I D+ KRSKGYAFI++T+++ A A++ M+ ++
Sbjct: 10 LPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMY 69
Query: 253 NGWMIVVDVAKTTPKYSRGRPR 274
NG MI +D+AK + +G PR
Sbjct: 70 NGRMIYIDIAKPGKRDFQGLPR 91
>gi|255555105|ref|XP_002518590.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
gi|223542435|gb|EEF43977.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
Length = 226
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 22 TSRELARLPGVLTVRPDPDY----NSVKKDYSCLDIQMSNPWNSQIGTTLLFPLGTTKHW 77
TSR+ P RP P + DYS +++ T++ P HW
Sbjct: 29 TSRQSWAPPPPFNRRPQPRLLMTRAATDSDYSAKRSS-----SNESRETIMLPGCDYNHW 83
Query: 78 LVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQ 137
L+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S + GF C +D+ ++
Sbjct: 84 LIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVDEATSE 143
Query: 138 ELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
+ G+PGVL V PD +NKDYGG+ N +
Sbjct: 144 KFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEI 177
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDE TS + LPGVL V PD + KDY
Sbjct: 122 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDY 167
>gi|449468532|ref|XP_004151975.1| PREDICTED: DAG protein, chloroplastic-like [Cucumis sativus]
Length = 230
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T++ P HWL+ M+ P T+ QM+D Y L VLG+ ++A+ +Y S +
Sbjct: 76 TIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYT 135
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPSDSSEASPTQIK 184
GF C + +E +++ G+PGVL V PD +NKDYGG+ N ++PS P + +
Sbjct: 136 GFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYPVYEPKKRR 195
Query: 185 TKK 187
K
Sbjct: 196 ETK 198
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C V EETS + LPGVL V PD + KDY
Sbjct: 126 MYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDY 171
>gi|297826049|ref|XP_002880907.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326746|gb|EFH57166.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV G+SF ++E+TL AF +G+++ V +IMDKI R KG A++ ++++E A AL E+
Sbjct: 23 LFVKGISFSSTEETLTQAFSQYGQVLRVDVIMDKIRCRPKGIAYVTFSSKEEAGKALLEL 82
Query: 248 NGKIINGWMIVVDVAK--------TTPKYSRG 271
NG++++G ++++D+ K T PK++ G
Sbjct: 83 NGRLVDGRVVILDITKAGKHNPPDTKPKHAGG 114
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GLS+ TS+++L+ AFE FG LVE K+++DK S RS+G+ F+ + ++A A+KE
Sbjct: 8 RCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKE 67
Query: 247 MNGKIINGWMIVVDVAK 263
M+G ++G I VD A+
Sbjct: 68 MHGMDLDGRSITVDKAQ 84
>gi|426257071|ref|XP_004022158.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Ovis aries]
gi|426257073|ref|XP_004022159.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Ovis aries]
gi|426257075|ref|XP_004022160.1| PREDICTED: putative RNA-binding protein 3 isoform 3 [Ovis aries]
gi|426257077|ref|XP_004022161.1| PREDICTED: putative RNA-binding protein 3 isoform 4 [Ovis aries]
gi|426257079|ref|XP_004022162.1| PREDICTED: putative RNA-binding protein 3 isoform 5 [Ovis aries]
Length = 160
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + SRG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSRG 91
>gi|15224298|ref|NP_181287.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20197470|gb|AAM15089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21536972|gb|AAM61313.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|114050677|gb|ABI49488.1| At2g37510 [Arabidopsis thaliana]
gi|330254316|gb|AEC09410.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 142
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 54/80 (67%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ + + +LFV+GLS T+ + L+ AF FG+LV+ ++I D+ S RSKG+ F+ Y T E A
Sbjct: 29 STLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDA 88
Query: 241 SAALKEMNGKIINGWMIVVD 260
A EMN K ++GW+I VD
Sbjct: 89 EKAKAEMNAKFLDGWVIFVD 108
>gi|356517261|ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 145
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 169 SMVPSDSSEAS--PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
S +P ++ A PT LFV+GLS T+ + LR F FGE+V +++ D++S S
Sbjct: 30 STLPPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYS 89
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTP 266
KG+ F++Y T E A+ ++ M+GK ++GW+I + A+ P
Sbjct: 90 KGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRP 129
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 55/79 (69%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GL+ T+ + LR F FGE+V +++ D++S SKG+ F++Y T E AS ++ M
Sbjct: 46 LFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEASKGIQGM 105
Query: 248 NGKIINGWMIVVDVAKTTP 266
+GK ++GW+I + AK++P
Sbjct: 106 DGKFLDGWVIFAEYAKSSP 124
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 14/120 (11%)
Query: 163 GNNLQNSMVP---SDSSEASPT------QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELV 213
GN ++NS V D S ++P+ + + KLFV G+S+ T + +LR +F +GE++
Sbjct: 8 GNLVKNSAVKHINQDFSVSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEVI 67
Query: 214 EVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRGRP 273
+VK+IMD+ + RS+G+ FI + T E AS+A++ M+G+ ++G I V+ A R RP
Sbjct: 68 DVKVIMDRETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYAT-----ERSRP 122
>gi|361067297|gb|AEW07960.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 51/75 (68%)
Query: 199 EKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIV 258
EK L AF FGE+VEVKI+MD++S+RSKG+ F++Y +E A A EMNGK+++G +I
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 259 VDVAKTTPKYSRGRP 273
VD K + S P
Sbjct: 61 VDDVKAKSQLSGDLP 75
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 183 IKTKKLFV-TGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
+ + KLF+ GL++ T E TLR AF FG + EVKII+D+ + RS+G+ F+ +T+ E A
Sbjct: 42 MSSSKLFIGAGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAE 101
Query: 242 AALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
AL+EM+G+ + G I VD A + +RG
Sbjct: 102 VALQEMDGRELAGRQIRVDYATDKARETRG 131
>gi|350538645|ref|NP_001233728.1| RNA-binding motif 3 [Cricetulus griseus]
gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus]
Length = 156
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + SRG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSRG 91
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV GLS+ T E +LR AF +GE+++ KII+D+ + RS+G+ FI Y EE AS+
Sbjct: 28 MSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASS 87
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ ++GK ++G + V A
Sbjct: 88 AIMALDGKDLHGRNLRVSAA 107
>gi|294464527|gb|ADE77774.1| unknown [Picea sitchensis]
Length = 251
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T+L P +HWL+ M+ P T +MVD Y L KV+G+E++A+ IY +S +
Sbjct: 87 TILLPGCDYEHWLIVMEFPKDPKPTSEEMVDTYINTLAKVVGSEEEAKKKIYALSTTTYT 146
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNN-LQNSMVPSDSSEASPTQIK 184
GF + +E +++ G+PGVL V PD NKDYGG+ + ++P S Q +
Sbjct: 147 GFQANISEELSEKCKGLPGVLWVLPDSYIDVPNKDYGGDKFVDGKVIPRPQPRPSERQTR 206
Query: 185 T 185
+
Sbjct: 207 S 207
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF N+ EE S + LPGVL V PD + KDY
Sbjct: 137 IYALSTTTYTGFQANISEELSEKCKGLPGVLWVLPDSYIDVPNKDY 182
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
QN VP S S + + KLF+ GLS+ T++ +L+ AF GFG++V ++I D+ + RS
Sbjct: 17 QNGKVPVSSMLNSIRCMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRS 76
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR-GRPR 274
+G+ F+++++ ++AS+AL M+G+ ++G I V A T + R G PR
Sbjct: 77 RGFGFVDFSSVDSASSALSAMDGQELHGRNIRVSYA--TERAPRPGGPR 123
>gi|297827259|ref|XP_002881512.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
gi|297327351|gb|EFH57771.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ + + +LFV+GLS T+ + L+ AF FG+LV+ ++I D+ + RSKG+ F+ Y T E A
Sbjct: 29 STLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRETGRSKGFGFVTYATIEDA 88
Query: 241 SAALKEMNGKIINGWMIVVD 260
A EMN K ++GW+I VD
Sbjct: 89 EKAKAEMNAKFLDGWVIFVD 108
>gi|361067299|gb|AEW07961.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126579|gb|AFG43909.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126581|gb|AFG43910.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126583|gb|AFG43911.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126585|gb|AFG43912.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126587|gb|AFG43913.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126589|gb|AFG43914.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126591|gb|AFG43915.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 51/75 (68%)
Query: 199 EKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIV 258
EK L AF FGE+VEVKI+MD++S+RSKG+ F++Y +E A A EMNGK+++G +I
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 259 VDVAKTTPKYSRGRP 273
VD K + S P
Sbjct: 61 VDDVKPKSQLSGDLP 75
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV GLS+ T E++LR F +G+++E KII D+ + RS+G+ FI Y + E ASA
Sbjct: 28 MSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASA 87
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ ++GK ++G I V+ A
Sbjct: 88 AITALDGKDLDGRNIRVNTA 107
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
QN VP S S + + KLF+ GL++ T +++L+ AF GFGE+ E ++I D+ + RS
Sbjct: 17 QNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRS 76
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVA 262
+G+ F+ Y + E+AS AL M+G+ + G I V A
Sbjct: 77 RGFGFVSYESTESASEALSAMDGQELGGRNIRVGYA 112
>gi|388493544|gb|AFK34838.1| unknown [Medicago truncatula]
Length = 263
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 10 THFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWNSQIGTTLLF 69
T F F + SR+ +P VR + S YS L+ N N T+L
Sbjct: 32 TRFAFALS---SASRQTLPIPHSFPVR----FKSSGSGYSPLNDPSPNWSNRPPKETILL 84
Query: 70 PLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCC 129
+HWL+ M+ P ++ +MV+ Y + L +VLG+E++A+ IY VS + GF
Sbjct: 85 DGCDYEHWLIIMEFPDNPKPSEDEMVNSYVKTLAQVLGSEEEAKKKIYSVSTSTYIGFGA 144
Query: 130 ELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+ +E + ++ +PGVL V PD NKDYGG+
Sbjct: 145 LVSEELSYKIKELPGVLWVLPDSYLDVPNKDYGGD 179
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF V EE S ++ LPGVL V PD + KDY
Sbjct: 131 IYSVSTSTYIGFGALVSEELSYKIKELPGVLWVLPDSYLDVPNKDY 176
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 57/80 (71%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV GLS+ T E +L+ AF +G+++E ++IMD+ + RS+G+ FI + + E A++
Sbjct: 37 MSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAAS 96
Query: 243 ALKEMNGKIINGWMIVVDVA 262
AL+ M+G+ ++G I V+ A
Sbjct: 97 ALQAMDGQDLHGRRIRVNYA 116
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GLS+ TS++ L+ AFE FG LVE K+++DK S RS+G+ F+ + ++A A+K
Sbjct: 8 RCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKA 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGR 272
MNG ++G I VD K P GR
Sbjct: 68 MNGMDLDGRSITVD--KAQPNQGSGR 91
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GLS+ TS+++L+ AFE FG LVE K+++DK S RS+G+ F+ + ++A A+KE
Sbjct: 8 RCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKE 67
Query: 247 MNGKIINGWMIVVDVAK 263
M+G ++G I VD A+
Sbjct: 68 MHGMDLDGRSITVDKAQ 84
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 62/87 (71%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ +++ K+FV G+SF T +++LR AF +GE++E ++I+D+ + RS+G+ F+ YT+ E A
Sbjct: 38 SSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEA 97
Query: 241 SAALKEMNGKIINGWMIVVDVAKTTPK 267
S+A++ ++G+ ++G + V+ A +
Sbjct: 98 SSAIQALDGQDLHGRRVRVNYANDRAR 124
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV GLS+ T E++LR F +G+++E KII D+ + RS+G+ FI Y + E ASA
Sbjct: 28 MSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASA 87
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ ++GK ++G I V+ A
Sbjct: 88 AITALDGKDLDGRNIRVNTA 107
>gi|449507141|ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
sativus]
Length = 175
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L+++GLSF T+E++LR AF+ FG+LVEV ++MD+++ R +G+AF+ Y +EE + A++
Sbjct: 90 RLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKAIEG 149
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
M+GK V+VAK+ + +G
Sbjct: 150 MHGK-----GDFVEVAKSRSELRQG 169
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 62/87 (71%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ +++ K+FV G+SF T +++LR AF +GE++E ++I+D+ + RS+G+ F+ YT+ E A
Sbjct: 38 SSMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEA 97
Query: 241 SAALKEMNGKIINGWMIVVDVAKTTPK 267
S+A++ ++G+ ++G + V+ A +
Sbjct: 98 SSAIQALDGQDLHGRRVRVNYANDRAR 124
>gi|449439247|ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like-B-like
[Cucumis sativus]
Length = 170
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 52/64 (81%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L+++GLSF T+E++LR AF+ FG+LVEV ++MD+++ R +G+AF+ Y +EE + A++
Sbjct: 90 RLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKAIEG 149
Query: 247 MNGK 250
M+GK
Sbjct: 150 MHGK 153
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ GL++ T E TLR AF FG + +VKII+D+ + RS+G+ F+ +T+ + A
Sbjct: 42 MSSSKLFIGGLAWATDENTLRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEV 101
Query: 243 ALKEMNGKIINGWMIVVDVA 262
AL+EM+G+ + G I VD A
Sbjct: 102 ALQEMDGRELAGRQIRVDYA 121
>gi|149744489|ref|XP_001493789.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Equus
caballus]
Length = 156
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 57/77 (74%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++ VT LS+ TS+ +L+ F FG++VEV ++ DK +KR +GYAFI+YT+++ A AL+
Sbjct: 39 RIMVTNLSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYAFIQYTSQDHAMLALEN 98
Query: 247 MNGKIINGWMIVVDVAK 263
M+ K ++G ++ V++AK
Sbjct: 99 MDHKYLDGRVVCVELAK 115
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 163 GNNLQNSMVPSDSSEASPTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVK 216
G +L+ ++ P+ + A+ T KLF+ GL++ T E+ LR AF FGE++EV+
Sbjct: 8 GGSLKGALKPNRLAAAALPATYTLSRGFSSKLFIGGLAWGTEERGLRDAFSPFGEIIEVR 67
Query: 217 IIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVA 262
+I D+ + RS+G+ F+ Y T++ A A++ M+G++++G I V+ A
Sbjct: 68 VIQDRETGRSRGFGFVSYITDQEAQKAMEAMDGRVLDGRTIRVNYA 113
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 14/120 (11%)
Query: 163 GNNLQNSMVPS---DSSEASPT------QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELV 213
G LQNS V D S ++P+ + + KLF+ G+S+ T E LR AF +G+++
Sbjct: 8 GKLLQNSAVKHINHDLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVL 67
Query: 214 EVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRGRP 273
+ KIIMD+ + RS+G+ FI + T E AS+AL+ M+ K ++G + V+ A R RP
Sbjct: 68 DAKIIMDRDTGRSRGFGFITFATSEEASSALQAMDNKELDGRTVRVNYAT-----ERARP 122
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T++ TLR FE G + E I++D+ + RS+G+ F+ + + +A+AA+
Sbjct: 2 SSKLFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAV 61
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSRGR 272
E+NGK ++G IVV VA+ + R R
Sbjct: 62 SELNGKDLDGRNIVVSVAEDKSRSDRNR 89
>gi|410988519|ref|XP_004000531.1| PREDICTED: putative RNA-binding protein 3 [Felis catus]
Length = 160
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGARG 91
>gi|357446239|ref|XP_003593397.1| DAG protein [Medicago truncatula]
gi|355482445|gb|AES63648.1| DAG protein [Medicago truncatula]
Length = 221
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T++ P HWL+ M+ P ++ QM+D Y Q L VLG+ ++A+ +Y S +
Sbjct: 67 TIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLQTLATVLGSMEEAKKNMYAFSTTTYT 126
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMV 171
GF C +D+ +++ G+PGVL V PD +N DYGG+ N +
Sbjct: 127 GFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNMDYGGDKYINGEI 172
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPD 38
+Y S T+ GF C VDE TS + LPGVL V PD
Sbjct: 117 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPD 152
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 168 NSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSK 227
+S V S A P +I +FVTGL+ T+ +TLR AF+ FGE+ +V+++ D++S SK
Sbjct: 30 SSGVTSALKTAEPNEI----VFVTGLNKRTTSETLREAFKKFGEVKQVRVVADRVSGYSK 85
Query: 228 GYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
G+ ++ Y T E A+ ++ M+GK + GW++ + A+
Sbjct: 86 GFGYVRYATSEDAAKGIQGMDGKFLEGWIVFAEYAR 121
>gi|189339246|ref|NP_446148.1| putative RNA-binding protein 3 [Rattus norvegicus]
gi|149028410|gb|EDL83795.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149028411|gb|EDL83796.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 156
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|338729124|ref|XP_003365829.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Equus
caballus]
Length = 135
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|388515563|gb|AFK45843.1| unknown [Lotus japonicus]
Length = 230
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 60 NSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHV 119
+S+ T++ P HWL+ M+ P ++ QM++ Y L+ VLG+ ++A+ +Y
Sbjct: 69 SSEQRETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYAF 128
Query: 120 SWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPS 173
S + GF C +D+ +++ G+PGVL V PD +NKDYGG+ N ++PS
Sbjct: 129 STTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPS 183
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDE TS + LPGVL V PD + KDY
Sbjct: 125 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDY 170
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 59/87 (67%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ +LFV+ LS YT++++LR F FG++ E ++I D ++R KG+ FI + +E+ A AL
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKAL 65
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSRG 271
K ++GKI++G +I V+VAK + G
Sbjct: 66 KSLDGKIVDGRLIFVEVAKNAEEVRAG 92
>gi|348553582|ref|XP_003462605.1| PREDICTED: putative RNA-binding protein 3-like [Cavia porcellus]
Length = 159
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFSTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|296235404|ref|XP_002762884.1| PREDICTED: putative RNA-binding protein 3 [Callithrix jacchus]
Length = 159
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|444518692|gb|ELV12325.1| Putative RNA-binding protein 3 [Tupaia chinensis]
Length = 154
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|301764797|ref|XP_002917810.1| PREDICTED: putative RNA-binding protein 3-like isoform 1
[Ailuropoda melanoleuca]
Length = 156
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
Q + PS +A P LFV+GLS T+ + L+ AF FGE+V+ +++ D++S S
Sbjct: 37 QANTAPSAREQAEPN----TNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYS 92
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTP 266
KG+ F+ Y + E A ++ M+GK ++GW+I + A+ P
Sbjct: 93 KGFGFVRYGSLEDAEKGIEGMDGKFLDGWVIFAEYARPRP 132
>gi|403290994|ref|XP_003936587.1| PREDICTED: putative RNA-binding protein 3-like [Saimiri boliviensis
boliviensis]
Length = 159
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A+K
Sbjct: 7 KLFVAGLNFNNDEQPLEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMKA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGGQIHVDHAGKSARGTRG 91
>gi|74006873|ref|XP_863171.1| PREDICTED: uncharacterized protein LOC609457 isoform 2 [Canis lupus
familiaris]
Length = 162
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
Q VP S S + + KLF+ GL + T ++TL+ AF GFGE+ E ++IMD+ + RS
Sbjct: 17 QKGQVPMVSMVNSIRCMSSSKLFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRS 76
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
+G+ F+ Y + E AS AL M+G+ + G + V A+
Sbjct: 77 RGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAE 113
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T KLFV GLS + +E +L AF +G+++E ++ DK++ KG+ F+++ + E A+ A
Sbjct: 34 TYKLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAR 93
Query: 245 KEMNGKIINGWMIVVDVAKT 264
+EMNGK +NG +I VD+AK
Sbjct: 94 EEMNGKALNGRVIYVDIAKA 113
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
gi|222850014|gb|EEE87561.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
K+FV GLSF ++EK + AF FGE++E KI+MDK KR KGY F+ + ++AA A +
Sbjct: 35 KVFVKGLSFSSTEKKIAEAFSEFGEVIEAKIVMDKARKRPKGYGFVTFAKKDAAEKACEG 94
Query: 247 MNGKIINGWMIVV 259
MNGK+++G I V
Sbjct: 95 MNGKLLDGRAIYV 107
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 55/78 (70%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV G+S+ T + +LR F +G+++E +II+D+ S RS+G+ F+ YT+ E ASAA+
Sbjct: 29 SSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 245 KEMNGKIINGWMIVVDVA 262
++GK ++G I V+ A
Sbjct: 89 TALDGKTLDGRSIRVNHA 106
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GLS+ TS++ L+ AFE FG L+E K+++DK S RS+G+ F+ + ++A A++E
Sbjct: 8 RCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIEE 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGR 272
MNG ++G I VD K P GR
Sbjct: 68 MNGMDLDGRTITVD--KAQPHQGSGR 91
>gi|395854422|ref|XP_003799690.1| PREDICTED: putative RNA-binding protein 3 [Otolemur garnettii]
Length = 155
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSTFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDRAGKSARGTRG 91
>gi|388499642|gb|AFK37887.1| unknown [Lotus japonicus]
Length = 231
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 60 NSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHV 119
+S+ T++ P HWL+ M+ P ++ QM++ Y L+ VLG+ ++A+ +Y
Sbjct: 69 SSEQRETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYAF 128
Query: 120 SWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPS 173
S + GF C +D+ +++ G+PGVL V PD +NKDYGG N ++PS
Sbjct: 129 STTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGGKYINGEIIPS 183
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDE TS + LPGVL V PD + KDY
Sbjct: 125 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDY 170
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T KLFV GLS + +E +L AF +G+++E ++ DK++ KG+ F+++ + E A+ A
Sbjct: 34 TYKLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAR 93
Query: 245 KEMNGKIINGWMIVVDVAKT 264
+EMNGK +NG +I VD+AK
Sbjct: 94 EEMNGKALNGRVIYVDIAKA 113
>gi|297819134|ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
gi|297323288|gb|EFH53709.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 57/79 (72%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+LFV+ LS YT++++LR F FG++ E ++I D ++R KG+ FI + +E+ A ALK
Sbjct: 8 QLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKALKS 67
Query: 247 MNGKIINGWMIVVDVAKTT 265
++GKI+ G +I V+VAK++
Sbjct: 68 LDGKIVEGRLIFVEVAKSS 86
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 56/78 (71%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T + +L+ AF FGE+ E +I D+ + RS+G+ F+ ++ E++A+ A+
Sbjct: 34 SSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAI 93
Query: 245 KEMNGKIINGWMIVVDVA 262
KEM+GK +NG I V++A
Sbjct: 94 KEMDGKELNGRQIRVNLA 111
>gi|344250008|gb|EGW06112.1| Putative RNA-binding protein 3 [Cricetulus griseus]
Length = 169
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + SRG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSRG 91
>gi|356543191|ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
Length = 145
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ + LR F FGE+V +++ D++S SKG+ F++Y T E A+ ++ M
Sbjct: 51 LFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGM 110
Query: 248 NGKIINGWMIVVDVAKTTP 266
+GK ++GW+I + A+ P
Sbjct: 111 DGKFLDGWVIFAEYARPRP 129
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 56/78 (71%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T + +L+ AF FGE+ E +I D+ + RS+G+ F+ ++ E++A+ A+
Sbjct: 34 SSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAI 93
Query: 245 KEMNGKIINGWMIVVDVA 262
KEM+GK +NG I V++A
Sbjct: 94 KEMDGKELNGRQIRVNLA 111
>gi|30683481|ref|NP_565646.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|106879155|gb|ABF82607.1| At2g27330 [Arabidopsis thaliana]
gi|330252880|gb|AEC07974.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 116
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 57/76 (75%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV G+SF ++E+TL AF +G++++V +IMDKI R KG+A++ ++++E A AL E+
Sbjct: 23 LFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKALLEL 82
Query: 248 NGKIINGWMIVVDVAK 263
N ++++G ++++D K
Sbjct: 83 NAQLVDGRVVILDTTK 98
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 55/78 (70%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV G+S+ T + +LR F +G+++E +II+D+ S RS+G+ F+ YT+ E ASAA+
Sbjct: 29 SSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 245 KEMNGKIINGWMIVVDVA 262
++GK ++G I V+ A
Sbjct: 89 TALDGKTLDGRSIRVNHA 106
>gi|125558733|gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GL+ T+ LR AF FG+++E ++I D+IS S+G+ F++Y T E A +K M
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 248 NGKIINGWMIVVDVAK 263
+GK ++GW+I + AK
Sbjct: 97 DGKFLDGWVIFAEYAK 112
>gi|115472673|ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|125600644|gb|EAZ40220.1| hypothetical protein OsJ_24665 [Oryza sativa Japonica Group]
gi|215767980|dbj|BAH00209.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GL+ T+ LR AF FG+++E ++I D+IS S+G+ F++Y T E A +K M
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 248 NGKIINGWMIVVDVAK 263
+GK ++GW+I + AK
Sbjct: 97 DGKFLDGWVIFAEYAK 112
>gi|291407441|ref|XP_002719942.1| PREDICTED: RNA binding motif protein 3 [Oryctolagus cuniculus]
Length = 155
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFIGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 55/78 (70%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV G+S+ T + +LR F +G+++E +II+D+ S RS+G+ F+ YT+ E ASAA+
Sbjct: 29 SSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 245 KEMNGKIINGWMIVVDVA 262
++GK ++G I V+ A
Sbjct: 89 TALDGKTLDGRSIRVNHA 106
>gi|9757907|dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana]
Length = 112
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 53/74 (71%)
Query: 190 VTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNG 249
+ GLS YT++++LR F FG++ E ++I D+ ++R KG+ FI + +E+ A ALK +NG
Sbjct: 25 LAGLSAYTTDQSLRQLFAPFGQITESRLIKDQQTQRPKGFGFITFESEDDAQKALKALNG 84
Query: 250 KIINGWMIVVDVAK 263
KI+NG +I V+ AK
Sbjct: 85 KIVNGRLIFVETAK 98
>gi|224071049|ref|XP_002303346.1| predicted protein [Populus trichocarpa]
gi|222840778|gb|EEE78325.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++ VT + SE TL+ F FGE+ EVK++ D+ KRSK YAFI+YT+++ A AL+
Sbjct: 55 RIMVTNIGHSISEATLQKEFSNFGEIAEVKLVKDETIKRSKPYAFIQYTSQDDAILALEN 114
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
M+ K ++G +I VD+AK RG
Sbjct: 115 MDRKTLDGRLIFVDLAKPGKDRFRG 139
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ KLFV G+S+ T E++L AF +G++++ +IIMD+ S RSKG+ F+ Y T E A
Sbjct: 39 SSTPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEA 98
Query: 241 SAALKEMNGKIINGWMIVVDVAKTTPK 267
S+A++ ++G+ + G + V+ A P+
Sbjct: 99 SSAIQALDGQDLYGRRVGVNFANERPR 125
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%)
Query: 178 ASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTE 237
A P + LFV+GLS T+ + LR AF FGE+ + K++ D++S SKG+ F+ Y T
Sbjct: 48 ARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATL 107
Query: 238 EAASAALKEMNGKIINGWMIVVDVAK 263
E ++ + M+GK ++GW+I + A+
Sbjct: 108 EDSAKGIAGMDGKFLDGWVIFAEYAR 133
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%)
Query: 178 ASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTE 237
A P + LFV+GLS T+ + LR AF FGE+ + K++ D++S SKG+ F+ Y T
Sbjct: 48 ARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATL 107
Query: 238 EAASAALKEMNGKIINGWMIVVDVAK 263
E ++ + M+GK ++GW+I + A+
Sbjct: 108 EDSAKGIAGMDGKFLDGWVIFAEYAR 133
>gi|13785947|gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus]
Length = 127
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|414585613|tpg|DAA36184.1| TPA: hypothetical protein ZEAMMB73_889429 [Zea mays]
Length = 165
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 68 LFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGF 127
LFP +HWL+ MDKPG TK QM+D Y Q L +V+G+E++A+ IY+VS + FGF
Sbjct: 71 LFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVVGSEEEAKKRIYNVSCERYFGF 130
Query: 128 CCELDDECAQELTG 141
CE+D+E + +L G
Sbjct: 131 GCEIDEETSNKLEG 144
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E++L AAF +G + +V +I DK + RS+G+ F++Y + A AL+
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEG 65
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNGK ++G I VD A + +RG
Sbjct: 66 MNGKTLDGRAIRVDEAGKGGRSNRG 90
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GL++ TS++ LR AFE +G LVE K+++DK S RS+G+ FI + ++A A+
Sbjct: 8 RCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|18422781|ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
gi|21542438|sp|P39697.2|RT19_ARATH RecName: Full=40S ribosomal protein S19, mitochondrial; Flags:
Precursor
gi|15028321|gb|AAK76637.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|20259155|gb|AAM14293.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|332008115|gb|AED95498.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
Length = 212
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 162 GGNNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDK 221
GG+ Q VP S S + TK L++ GLS T E +L+ AF F + E +++ +K
Sbjct: 8 GGHWKQGVNVPVSSMLGSLRYMSTK-LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNK 66
Query: 222 ISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTP 266
++ RS+GY F+ + +E++A++A+ MNG+ +NG+ I V+VAK P
Sbjct: 67 VTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWP 111
>gi|281353659|gb|EFB29243.1| hypothetical protein PANDA_006181 [Ailuropoda melanoleuca]
Length = 148
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ + LR AF FGE+V +++ D++S SKG+ F+ Y T E A+ ++ M
Sbjct: 37 LFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATKGIEGM 96
Query: 248 NGKIINGWMIVVDVAK 263
+GK ++GW+I + A+
Sbjct: 97 DGKFLDGWVIFAEYAR 112
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GL++ TS++ LR AFE +G LVE K+++DK S RS+G+ FI + ++A A+
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|457760|emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
gi|459422|emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclear encoded [Arabidopsis
thaliana]
Length = 212
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 162 GGNNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDK 221
GG+ Q VP S S + TK L++ GLS T E +L+ AF F + E +++ +K
Sbjct: 8 GGHWKQGVNVPVSSMLGSLRYMSTK-LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNK 66
Query: 222 ISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTP 266
++ RS+GY F+ + +E++A++A+ MNG+ +NG+ I V+VAK P
Sbjct: 67 VTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWP 111
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 57/80 (71%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ G+S+ T +++L+ AF +GE++E ++I+D+ + RS+G+ F+ YT+ + A+A
Sbjct: 28 MSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAA 87
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ M+GK + G ++ V A
Sbjct: 88 AITGMDGKDLQGRIVRVSYA 107
>gi|8809615|dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]
Length = 244
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 162 GGNNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDK 221
GG+ Q VP S S + TK L++ GLS T E +L+ AF F + E +++ +K
Sbjct: 40 GGHWKQGVNVPVSSMLGSLRYMSTK-LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNK 98
Query: 222 ISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTP 266
++ RS+GY F+ + +E++A++A+ MNG+ +NG+ I V+VAK P
Sbjct: 99 VTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWP 143
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 59/80 (73%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ G+++ E +LR AF +GE+VE ++I+D+ + RS+G+ F+ +T+ EAAS+
Sbjct: 37 MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAASS 96
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A++ ++G+ ++G ++ V+ A
Sbjct: 97 AIQALDGRDLHGRVVKVNYA 116
>gi|296083698|emb|CBI23687.3| unnamed protein product [Vitis vinifera]
Length = 116
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%)
Query: 94 MVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDEN 153
M+D Y Q L KV+G+E++A+ IY+VS + FGF CE+D+E + +L G+PGVL V PD
Sbjct: 1 MIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSY 60
Query: 154 FGSENKDYGGNNLQNSMVPSDSSE 177
E KDYG N + S E
Sbjct: 61 VDPEYKDYGAELFVNGEIVQRSPE 84
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY+ SC+ +FGF C +DEETS +L LPGVL V PD + KDY
Sbjct: 23 IYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEYKDY 68
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%)
Query: 177 EASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTT 236
E + + KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T
Sbjct: 54 EITAMSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTN 113
Query: 237 EEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
E AS A++ MNG+ ++G I VD A + + +RG
Sbjct: 114 PEHASDAMRAMNGESLDGRQIRVDHAGKSARGTRG 148
>gi|357122488|ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GL+ T+ LR AF FG++ E ++I D+IS S+G+ F++Y T E A +K M
Sbjct: 42 LFVSGLNKRTTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 101
Query: 248 NGKIINGWMIVVDVAK----TTPKYSRGRP 273
+GK ++GW+I + AK P S G P
Sbjct: 102 DGKFLDGWVIFAEYAKQREAQQPPQSAGTP 131
>gi|403357639|gb|EJY78448.1| U1 small nuclear ribonucleoprotein 70 kDa [Oxytricha trifallax]
Length = 426
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K + V+ LS+ T EKTL+ FE +G + V+II+D+ S + KGYAFIEY E AL+
Sbjct: 120 KTIVVSRLSYKTDEKTLKKEFEVYGPIKRVRIIIDQHSGKPKGYAFIEYDNERDFQLALE 179
Query: 246 EMNGKIINGWMIVVDVAKTTPKYSRGR 272
NG+ ++G +VVD Y RGR
Sbjct: 180 RGNGRRVDGARVVVD-------YERGR 199
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ + L+ AF FGE+V+ +++ D++S SKG+ F++Y T E A+ +K M
Sbjct: 57 LFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGM 116
Query: 248 NGKIINGWMIVVDVAK 263
+G+ ++GW+I + A+
Sbjct: 117 DGQFLDGWVIFAEYAR 132
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLS++TS+ TLR F+ FGE+ E ++ D+ + RS+G+ F+ + T+ A +AL
Sbjct: 3 KLFVHGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVRFATDAEADSALGA 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MN + +G +I VD A P+ G
Sbjct: 63 MNNQEFDGRVIRVDKAFDRPQRPEG 87
>gi|118483610|gb|ABK93700.1| unknown [Populus trichocarpa]
Length = 261
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N Q T+L HWL+ M+ P T+ +M++ Y + L+ VLG
Sbjct: 57 YSPLNDPSPNWTNRQPKETILLDGCDYNHWLIVMEFPNDPKPTEEEMINAYVKTLSSVLG 116
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E++A+ IY VS + GF + +E + ++ +PGVL V PD NKDYGG+
Sbjct: 117 SEEEAKKSIYSVSTTTYTGFGALISEELSYKVKALPGVLWVLPDSYLDVPNKDYGGD 173
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 2 CIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 124 SIYSVSTTTYTGFGALISEELSYKVKALPGVLWVLPDSYLDVPNKDY 170
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 58/79 (73%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T +++LR AF FG++V+ ++I+D+ S RS+G+ F+ ++ +E+A+ A+
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+ + G I V +A+
Sbjct: 97 KAMDGQELQGRNIRVSIAQ 115
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 70/114 (61%), Gaps = 9/114 (7%)
Query: 163 GNNLQ---NSMVPSDSSEASPTQ------IKTKKLFVTGLSFYTSEKTLRAAFEGFGELV 213
GN L+ N + S+ S + P+ + + K+F+ G+SF T + L+ AF+ +G +V
Sbjct: 8 GNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVV 67
Query: 214 EVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPK 267
E IIMD+ + RS+G+ F+ YT+ E AS+A++ M+G+ ++G + V+ A P+
Sbjct: 68 EGIIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATERPQ 121
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 58/79 (73%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T +++LR AF FG++V+ ++I+D+ S RS+G+ F+ ++ +E+A+ A+
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+ + G I V +A+
Sbjct: 97 KAMDGQELQGRNIRVSIAQ 115
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 58/79 (73%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T +++LR AF FG++V+ ++I+D+ S RS+G+ F+ ++ +E+A+ A+
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+ + G I V +A+
Sbjct: 97 KAMDGQELQGRNIRVSIAQ 115
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 53/76 (69%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GL+ T+ L+ AF FG+++E ++I D+IS S+G+ F++Y T + A A+K M
Sbjct: 38 LFVSGLNKRTTSNGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGM 97
Query: 248 NGKIINGWMIVVDVAK 263
+GK ++GW+I + AK
Sbjct: 98 DGKFLDGWVIFAEYAK 113
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ + L+ AF FGE+V+ K++ D+ S SKG+ F+ Y T E A+ +K M
Sbjct: 56 LFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKGM 115
Query: 248 NGKIINGWMIVVDVAKTTPKYSRGRPR 274
+G+ ++GW+I + A+ PK +P+
Sbjct: 116 DGQFLDGWVIFAEYAR--PKQPPSQPQ 140
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ + LR AF FGE++ +++ D++S SKG+ F+ Y T E A+ ++
Sbjct: 37 LFVSGLSKRTTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAAKGIEGK 96
Query: 248 NGKIINGWMIVVDVAKTTP 266
+GK ++GW+I + AK P
Sbjct: 97 DGKFLDGWVIFAEYAKPRP 115
>gi|388498556|gb|AFK37344.1| unknown [Medicago truncatula]
Length = 263
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 10 THFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWNSQIGTTLLF 69
T F F + R+ +P VR + S YS L+ N N T+L
Sbjct: 32 TRFAFALS---SAFRQTLPIPHSFPVR----FKSSGSGYSPLNDPSPNWSNRPPKETILL 84
Query: 70 PLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCC 129
+HWL+ M+ P ++ +MV+ Y + L +VLG+E++A+ IY VS + GF
Sbjct: 85 DGCDYEHWLIIMEFPDNPKPSEDEMVNSYVKTLAQVLGSEEEAKKKIYSVSTSTYIGFGA 144
Query: 130 ELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+ +E + ++ +PGVL V PD NKDYGG+
Sbjct: 145 LVSEELSYKIKELPGVLWVLPDSYLDVPNKDYGGD 179
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF V EE S ++ LPGVL V PD + KDY
Sbjct: 131 IYSVSTSTYIGFGALVSEELSYKIKELPGVLWVLPDSYLDVPNKDY 176
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 58/79 (73%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T +++LR AF FG++V+ ++I+D+ S RS+G+ F+ ++ +E+A+ A+
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+ + G I V +A+
Sbjct: 97 KAMDGQELQGRNIRVSIAQ 115
>gi|284022113|sp|Q925G0.2|RBM3_RAT RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
Length = 155
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS ++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + +RG
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRG 91
>gi|359478318|ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|296084274|emb|CBI24662.3| unnamed protein product [Vitis vinifera]
Length = 108
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Query: 186 KKLFV--TGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+KLF+ GLS+ T+E L+ AF +GE++EVK+I D +S +SKGY F+++T+++ A A
Sbjct: 27 RKLFIGDAGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAHIA 86
Query: 244 LKEMNGKIINGWMIVVDVA 262
LKEM+G+ ++G I V A
Sbjct: 87 LKEMDGQSLDGRNIRVTYA 105
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 57/80 (71%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + +LF+ GLS+ +++LR +F +GE++E +II D+ + RS+G+ FI +T+ E A+A
Sbjct: 37 MSSSRLFIGGLSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAA 96
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ M+GK ++G ++ V+ A
Sbjct: 97 AITGMDGKDLHGRLVHVNYA 116
>gi|225461185|ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ + L AF FG++V +++ D++S SKG+ F+ Y + E A+ +K M
Sbjct: 43 LFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAEGIKGM 102
Query: 248 NGKIINGWMIVVDVAKTTP 266
+GK ++GW+I + A+ P
Sbjct: 103 DGKFLDGWVIFAEYARPRP 121
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 58/79 (73%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T +++LR AF FG++V+ ++I+D+ S RS+G+ F+ ++ +E+A+ A+
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+ + G I V +A+
Sbjct: 97 KAMDGQELQGRNIRVTIAQ 115
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 58/80 (72%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ GLS+ T + +LR AF +GE++E ++I+D+ + RS+G+ F+ +T+ E AS+
Sbjct: 37 MSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASS 96
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A++ ++G+ ++G + V+ A
Sbjct: 97 AIQALDGQDLHGRRVRVNYA 116
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GL++ TS++ LR AFE +G L+E K+++DK S RS+G+ FI + ++A A+
Sbjct: 8 RCFIGGLAWSTSDRGLRDAFEKYGHLLEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|292490317|ref|YP_003525756.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291578912|gb|ADE13369.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 97
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V LS+ +++ LRAAFE +GE+ K+I+DK S RSKG+ F+E +E A A+KEM
Sbjct: 3 IYVGNLSYQVTDEELRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMARQEDAETAIKEM 62
Query: 248 NGKIINGWMIVVDVAK 263
N + G IVV+ A+
Sbjct: 63 NDSDLKGRQIVVNQAR 78
>gi|357472741|ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355507710|gb|AES88852.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 112
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLS+ T+E LR FE G+++EVK+I + + SKGY F+ + +E AA+ A KE
Sbjct: 34 KLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVRFNSETAAATARKE 93
Query: 247 MNGKIINGWMIVVDVA 262
++G+I++G I V A
Sbjct: 94 LHGQIVDGRRIRVGYA 109
>gi|355757333|gb|EHH60858.1| RNA-binding motif protein 3 [Macaca fascicularis]
Length = 157
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+ ++G I VD A + +
Sbjct: 67 MNGESLDGRQIRVDHAGKSAR 87
>gi|388491646|gb|AFK33889.1| unknown [Lotus japonicus]
Length = 183
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 66 TLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNF 125
T++ P WL+ M+ P ++ QM++ Y L+ VLG+ ++A+ +Y S +
Sbjct: 75 TIMLPGYDYNRWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYAFSTTTYT 134
Query: 126 GFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQN-SMVPS 173
GF C +D+ +++ G+PGVL V PD +NKDYGG+ N ++PS
Sbjct: 135 GFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPS 183
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
+Y S T+ GF C VDE TS + LPGVL V PD + KDY
Sbjct: 125 MYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDY 170
>gi|343432668|ref|NP_001230348.1| RNA binding motif (RNP1, RRM) protein 3 [Sus scrofa]
Length = 156
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+ ++G I VD A + +
Sbjct: 67 MNGESLDGRQIRVDHAGKSAR 87
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + +V +I DK + RS+G+ F++Y E A AL+
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEG 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKSVDGRTIRVDEA 81
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 61/100 (61%)
Query: 163 GNNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKI 222
GN L+ S + + + + K+FV G+S+ T +++L AF +G++ E K+IMD+
Sbjct: 8 GNALKRSAGSGSAMLQAVRSMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRE 67
Query: 223 SKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVA 262
S RS+G+ F+ +T+ E A AA+ M+GK + G ++ V A
Sbjct: 68 SGRSRGFGFVTFTSSEEAGAAITGMDGKDLQGRIVRVSYA 107
>gi|5803137|ref|NP_006734.1| putative RNA-binding protein 3 [Homo sapiens]
gi|383872909|ref|NP_001244635.1| RNA binding motif (RNP1, RRM) protein 3 [Macaca mulatta]
gi|332860686|ref|XP_521047.2| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan
troglodytes]
gi|332860688|ref|XP_003317502.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan
troglodytes]
gi|397471359|ref|XP_003807263.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan paniscus]
gi|397471361|ref|XP_003807264.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan paniscus]
gi|402910082|ref|XP_003917720.1| PREDICTED: putative RNA-binding protein 3 [Papio anubis]
gi|426395802|ref|XP_004064149.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Gorilla
gorilla gorilla]
gi|426395804|ref|XP_004064150.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Gorilla
gorilla gorilla]
gi|1710620|sp|P98179.1|RBM3_HUMAN RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3; AltName: Full=RNPL
gi|881954|gb|AAB17212.1| RNPL [Homo sapiens]
gi|13905080|gb|AAH06825.1| RNA binding motif (RNP1, RRM) protein 3 [Homo sapiens]
gi|119571152|gb|EAW50767.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|119571153|gb|EAW50768.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|380815298|gb|AFE79523.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815300|gb|AFE79524.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815302|gb|AFE79525.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420491|gb|AFH33459.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420493|gb|AFH33460.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948600|gb|AFI37905.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948602|gb|AFI37906.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|410228038|gb|JAA11238.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+ ++G I VD A + +
Sbjct: 67 MNGESLDGRQIRVDHAGKSAR 87
>gi|332255488|ref|XP_003276864.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Nomascus
leucogenys]
Length = 157
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+ ++G I VD A + +
Sbjct: 67 MNGESLDGRQIRVDHAGKSAR 87
>gi|351724633|ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Query: 177 EASPTQI-----KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
ASP+Q+ T K+FV GL+F T+E+ L AF +G +++ II++K RSKG+ +
Sbjct: 19 HASPSQLLFLRTMTSKVFVKGLAFSTTEEELAKAFSQYGSVLKANIILNKAKNRSKGFGY 78
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDV 261
+ + EE A A +MNGKI++G +I VDV
Sbjct: 79 VIFAKEEEACKAQIDMNGKILHGRVIYVDV 108
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
QNS P DS S + + +LFV GLS+ T +++L+ AF FGE+ + K+I D+ + RS
Sbjct: 17 QNS-APIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRS 75
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
+G+ F+ + EAA +AL M+G +NG I V A+
Sbjct: 76 RGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQ 112
>gi|410255528|gb|JAA15731.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+ ++G I VD A + +
Sbjct: 67 MNGESLDGRQIRVDHAGKSAR 87
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GL++ TS++ LR AFE +G LVE K+++DK S RS+G+ FI + ++A A+
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V LS+ +++ LRAAFE +GE+ K+I+DK S RSKG+ F+E ++E A AA+KEM
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIKEM 79
Query: 248 NGKIINGWMIVVDVAK 263
+ I G +VV+ A+
Sbjct: 80 HDSDIKGRQVVVNEAR 95
>gi|417396785|gb|JAA45426.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 190
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+ ++G I VD A + +
Sbjct: 67 MNGESLDGRQIRVDHAGKSAR 87
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + K+FV GLS+ T E LR AF +G++++ KII+D S+RS+G+ FI Y E+ A A
Sbjct: 28 MSSSKIFVGGLSYNTDETGLREAFTHYGDIIDAKIIVDHESRRSRGFGFITYAAEDQAKA 87
Query: 243 ALKEMNGKIINGWMIVVDVAK 263
A+ ++GK ++G I V A
Sbjct: 88 AIMALDGKELHGRNIRVSEAN 108
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 57/79 (72%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T +++LR AF FG++V+ ++I+D+ S RS+G+ F+ ++ +E A+ A+
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAI 96
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+ + G I V +A+
Sbjct: 97 KAMDGQELQGRNIRVSIAQ 115
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 56/80 (70%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV GLS+ T E +L+ AF GE++E ++IMD+ + RS+G+ F+ +T+ E A++
Sbjct: 37 MSSSKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAAS 96
Query: 243 ALKEMNGKIINGWMIVVDVA 262
AL ++G+ ++G I V+ A
Sbjct: 97 ALTALDGQDLHGRQIRVNYA 116
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 56/80 (70%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV GLS+ T E +L+ F +GE++E ++I+D+ + RS+G+ FI + + E A++
Sbjct: 37 MSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATS 96
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A++ M+G+ ++G I V+ A
Sbjct: 97 AMQAMDGQDLHGRRIKVNYA 116
>gi|326527061|dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GL+ T+ LR AF FG++ + ++I D+IS S+G+ F++Y T E A+ +K M
Sbjct: 42 LFVSGLNKRTTSDGLREAFSKFGQVTDARVITDRISGYSRGFGFVKYATVEEAAEGIKGM 101
Query: 248 NGKIINGWMIVVDVAK 263
+GK +GW+I + AK
Sbjct: 102 DGKFFDGWVIFAEYAK 117
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ GL + ++TL+ AF GFGE+ E ++IMD+ + RS+G+ F+ Y + E AS
Sbjct: 33 MSSSKLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASE 92
Query: 243 ALKEMNGKIINGWMIVVDVAK 263
AL M+G+ + G + V A+
Sbjct: 93 ALSAMDGQNLGGRTVRVSFAE 113
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ LR AF FGE++ +++ D+++ SKG+ F+ Y + E AS ++ M
Sbjct: 50 LFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGIEGM 109
Query: 248 NGKIINGWMIVVDVAKTTP 266
+GK ++GW+I + A+ P
Sbjct: 110 DGKFLDGWVIFAEYARPRP 128
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L++ T+E ++ FE +G + V++I DK++ + KGYAFIEY + AA K
Sbjct: 138 KTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ I+G ++VDV +T P + RPR
Sbjct: 198 QADGRKIDGRRVLVDVERGRTVPNW---RPR 225
>gi|346469013|gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
Length = 139
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ + LR AF FGE+V +++ D++S SKG+ F++Y T E A+ +K M
Sbjct: 38 LFVSGLSKRTTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGM 97
Query: 248 NGKIINGWMIVVD 260
+GK ++GW+I +
Sbjct: 98 DGKFLDGWVIFAE 110
>gi|417396333|gb|JAA45200.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 158
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+ ++G I VD A + +
Sbjct: 67 MNGESLDGRQIRVDHAGKSAR 87
>gi|255551847|ref|XP_002516969.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
gi|223544057|gb|EEF45583.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
Length = 262
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Query: 35 VRPDPDYNSVKKD-YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQ 93
+ P+P + + YS L+ N N ++L +HWL+ M+ P ++ +
Sbjct: 47 LHPNPTRSKTSRSGYSPLNDPSPNWSNRPPKESILLDGCDYEHWLIVMEFPNDPKPSEEE 106
Query: 94 MVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDEN 153
M++ Y + L VLG+E++A+ IY VS + GF + +E + +L G+PGVL V PD
Sbjct: 107 MINAYVKTLASVLGSEEEAKKKIYSVSTTTYTGFGALISEELSYKLKGLPGVLWVLPDSY 166
Query: 154 FGSENKDYGGN 164
NKDYGG+
Sbjct: 167 LDVPNKDYGGD 177
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S +L LPGVL V PD + KDY
Sbjct: 129 IYSVSTTTYTGFGALISEELSYKLKGLPGVLWVLPDSYLDVPNKDY 174
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 59/80 (73%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ G+++ E +LR AF +GE+V+ ++I+D+ + RS+G+ F+ +T+ EAAS+
Sbjct: 37 MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASS 96
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A++ ++G+ ++G ++ V+ A
Sbjct: 97 AIQALDGRDLHGRVVKVNYA 116
>gi|357454121|ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula]
Length = 89
Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV+ LSFYT+++ L + F FG L E +I D+ ++R KG+ F+ Y +E A A K
Sbjct: 8 KLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKA 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYS 269
+NG+I++G +I V+ AK PK S
Sbjct: 68 LNGRIVDGRLIFVEHAK--PKDS 88
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 58/80 (72%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ GLS+ T + +LR AF +GE++E ++I+D+ + RS+G+ F+ +T+ E AS+
Sbjct: 37 MSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASS 96
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A++ ++G+ ++G + V+ A
Sbjct: 97 AIQALDGQDLHGRRVRVNYA 116
>gi|255944269|ref|XP_002562902.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587637|emb|CAP85680.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%)
Query: 191 TGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGK 250
+GLS++TS+ TLR F+ FGE+ E ++ D+ ++RS+G+ F+ + T+ A AAL MN +
Sbjct: 4 SGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATQRSRGFGFVRFATDAEADAALGAMNNQ 63
Query: 251 IINGWMIVVDVAKTTPKYSRG 271
+G +I VD A P+ S G
Sbjct: 64 EFDGRVIRVDKAFDRPQRSEG 84
>gi|449516497|ref|XP_004165283.1| PREDICTED: glycine-rich RNA-binding protein 2-like, partial
[Cucumis sativus]
Length = 100
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%)
Query: 193 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKII 252
LS T+++ LR AF FG+L + K++ D+ + RSKG+AF+ Y+T + A A +EMN K +
Sbjct: 1 LSRLTTDEKLREAFSSFGQLADAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFL 60
Query: 253 NGWMIVVDVAK 263
+GW+I VD AK
Sbjct: 61 DGWVIFVDPAK 71
>gi|255573326|ref|XP_002527590.1| conserved hypothetical protein [Ricinus communis]
gi|223533029|gb|EEF34792.1| conserved hypothetical protein [Ricinus communis]
Length = 66
Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 47/59 (79%)
Query: 193 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKI 251
+SF T+E++LR AF+ FG+LVEV ++MDKI+ R +G+AF+ Y TEE + A++ M+GK+
Sbjct: 7 ISFRTTEESLRNAFQNFGKLVEVNLVMDKIANRPRGFAFLRYATEEESQKAIEGMHGKV 65
>gi|356550257|ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 73.9 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV LSFYT+++ L+ F FG + + + +D I+KR KG+ F+ + +E A A K
Sbjct: 8 KLFVHRLSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKACKA 67
Query: 247 MNGKIINGWMIVVDVA 262
MNG+I+NG +I+V+ A
Sbjct: 68 MNGRIVNGRLILVEPA 83
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + +V +I DK + RS+G+ F++Y E A AL
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDG 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKSVDGRTIRVDEA 81
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E++L AAF +G + +V +I DK + RS+G+ F++Y + A AL+
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALEG 65
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNGK ++G I VD A + +RG
Sbjct: 66 MNGKTLDGRAIRVDEAGKGGRSNRG 90
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 58/78 (74%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L +AF +GE++E KII+D+ ++RS+G+ F+ ++TEEA +A++
Sbjct: 9 RCFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ + + F+ GL++ TS++ L+ AFE FG+L E K+++DK S RS+G+ F+ + ++A
Sbjct: 2 SDVDEYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAM 61
Query: 241 SAALKEMNGKIINGWMIVVDVAKTTPKYS 269
A+ MNG ++G I VD KT P+ S
Sbjct: 62 DEAIDAMNGMDLDGRTITVD--KTQPQGS 88
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 58/79 (73%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T +++LR A FG++V+ ++I+D+ S RS+G+ F+ ++ +E+A+ A+
Sbjct: 37 STKLFVGGLSWGTDDQSLRDALATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+ + G I V++A+
Sbjct: 97 KAMDGQELQGRNIRVNIAQ 115
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 54/76 (71%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GL+ T+ + L+ AF FG+++E ++I D+IS S+G+ F++Y T + A A++ M
Sbjct: 36 LFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEGM 95
Query: 248 NGKIINGWMIVVDVAK 263
+GK ++GW+I + AK
Sbjct: 96 DGKFLDGWVIFAEYAK 111
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V LS+ +++ LRAAFE +GE+ K+I+DK S RSKG+ F+E ++E A A+KEM
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAETAIKEM 79
Query: 248 NGKIINGWMIVVDVAKTTPKYSRGRPR 274
+ I G IVV+ A+ + + G R
Sbjct: 80 HDSDIKGRQIVVNEARPRNESNNGGFR 106
>gi|261862339|ref|NP_001159882.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|261862342|ref|NP_001159883.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|6093936|sp|O89086.1|RBM3_MOUSE RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
gi|3395381|dbj|BAA32060.1| rbm3 [Mus musculus]
gi|12834559|dbj|BAB22957.1| unnamed protein product [Mus musculus]
gi|12840849|dbj|BAB24981.1| unnamed protein product [Mus musculus]
gi|13879226|gb|AAH06580.1| Rbm3 protein [Mus musculus]
gi|15983757|gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
gi|74180334|dbj|BAE32335.1| unnamed protein product [Mus musculus]
gi|74198712|dbj|BAE39828.1| unnamed protein product [Mus musculus]
gi|74228699|dbj|BAE21846.1| unnamed protein product [Mus musculus]
gi|76780243|gb|AAI06177.1| Rbm3 protein [Mus musculus]
gi|148702004|gb|EDL33951.1| mCG116386, isoform CRA_a [Mus musculus]
gi|148702009|gb|EDL33956.1| mCG116386, isoform CRA_a [Mus musculus]
Length = 153
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|351706516|gb|EHB09435.1| Putative RNA-binding protein 3 [Heterocephalus glaber]
Length = 157
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 167 QNSMVPSDSSEASPT-----QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDK 221
Q++ S S+ ++P + + KLFV GLS+ T++ +L+ AF FGE+ E ++I D+
Sbjct: 13 QSAFASSVSAGSAPAMFNAARFMSNKLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDR 72
Query: 222 ISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTP 266
+ RS+G+ F+E++ EE A A M+G+ ++G + V+ A P
Sbjct: 73 ETGRSRGFGFVEFSNEEDAKKAASSMDGQELDGRSVRVNFANERP 117
>gi|407262829|ref|XP_003945671.1| PREDICTED: putative RNA-binding protein 3-like [Mus musculus]
Length = 154
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E +L AAF +G + +V +I DK + RS+G+ F++Y E A AL
Sbjct: 6 KLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKTLDGRAIRVDEA 81
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 69/116 (59%), Gaps = 7/116 (6%)
Query: 163 GNNLQNSMVPSDSSEASP-------TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEV 215
G L+ S+ + S SP + + KLFV GLS+ T +++LR AF FG++V+
Sbjct: 8 GGLLRQSISGNAVSATSPMKSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDA 67
Query: 216 KIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
++I+D+ S RS+G+ F+ ++ +E A+ A+K M+G+ + G I V +A+ S G
Sbjct: 68 RVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIAQERAPRSGG 123
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
Q++ P S + + KLF+ GLS+ +++LR AF +G++VE ++I D+ + RS
Sbjct: 17 QSTQAPVSSMLNYLRHMSSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRS 76
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
+G+ F+ +T+EE+A++AL M+G+ +NG I V A
Sbjct: 77 RGFGFVNFTSEESATSAL-SMDGQDLNGRNIRVSYAN 112
>gi|148702008|gb|EDL33955.1| mCG116386, isoform CRA_e [Mus musculus]
Length = 179
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 32 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 91
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 92 MNGESLDGRQIRVDHA 107
>gi|37497112|ref|NP_058089.2| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|261862337|ref|NP_001159881.1| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|26340316|dbj|BAC33821.1| unnamed protein product [Mus musculus]
gi|26352956|dbj|BAC40108.1| unnamed protein product [Mus musculus]
gi|37589528|gb|AAH59098.1| Rbm3 protein [Mus musculus]
Length = 154
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + L++AF FGE+++ KII D+ + RS+G+ F+ + TEE+ AA++
Sbjct: 5 RCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAIEG 64
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 65 MNGKELDGRSITVNQAQS 82
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%)
Query: 180 PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 239
P K+FV LS+ T +L AF FGE+V+ ++ D+ + RS+G+ F+ +++ E+
Sbjct: 5 PEAAPGTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPES 64
Query: 240 ASAALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
ASAA+ MNG+ +NG I V++A P Y G
Sbjct: 65 ASAAVDAMNGQDLNGRNIRVNLANERPAYGGG 96
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 57/79 (72%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ +LFV GLS+ T +++L+ AF FG++V+ K+I+D+ S RS+G+ F+ ++ E+ A A+
Sbjct: 38 SSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAM 97
Query: 245 KEMNGKIINGWMIVVDVAK 263
M+G+ ++G I V++A+
Sbjct: 98 NAMDGQQLHGRNIRVNLAQ 116
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ + + F+ GL++ TS++ L+ AFE FG+L E K+++DK S RS+G+ F+ + ++A
Sbjct: 2 SDVDEYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAM 61
Query: 241 SAALKEMNGKIINGWMIVVDVAK 263
A+ MNG ++G I VD A+
Sbjct: 62 DEAIDAMNGMDLDGRTITVDKAQ 84
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GLS T+ + L AF FGE+ +++ D+++ SKG+ F++Y T E A+ ++ M
Sbjct: 81 LFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVKYATLEDAAKGIEGM 140
Query: 248 NGKIINGWMIVVDVAKTTP 266
+GK ++GW+I + A+ P
Sbjct: 141 DGKFLDGWVIFAEYARPRP 159
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
+ + KLF+ GLS+ +++LR AF +G++VE ++I D+ + RS+G+ FI +T+EE+A+
Sbjct: 7 HMSSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTSEESAT 66
Query: 242 AALKEMNGKIINGWMIVVDVAK 263
+AL M+G+ +NG I V A
Sbjct: 67 SALS-MDGQDLNGRNIRVSYAN 87
>gi|356544076|ref|XP_003540481.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Glycine max]
Length = 363
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HWLV M+KP G T+ ++D Y + L KV+G+E++A+M IY VS + F F + +E
Sbjct: 97 EHWLVVMEKP-EGDPTRDDIIDSYIKTLAKVIGSEEEARMKIYSVSTRHYFAFGALVSEE 155
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSM-VPSD 174
+ +L +PGV V PD + KDYGG N VP D
Sbjct: 156 LSIKLKELPGVRWVLPDSYLNVKEKDYGGEPFINGQAVPYD 196
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
M IY S +F F V EE S +L LPGV V PD N +KDY
Sbjct: 135 MKIYSVSTRHYFAFGALVSEELSIKLKELPGVRWVLPDSYLNVKEKDY 182
>gi|224110350|ref|XP_002315492.1| predicted protein [Populus trichocarpa]
gi|222864532|gb|EEF01663.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L HWL+ M+ P T+ +M++ Y + L+ VLG
Sbjct: 57 YSPLNDPSPNWTNRPPKETILLDGCDYNHWLIVMEFPNDPKPTEEEMINAYVKTLSSVLG 116
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E++A+ IY VS + GF + +E + ++ +PGVL V PD NKDYGG+
Sbjct: 117 SEEEAKKSIYSVSTTTYTGFGALISEELSYKVKALPGVLWVLPDSYLDVPNKDYGGD 173
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 2 CIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 124 SIYSVSTTTYTGFGALISEELSYKVKALPGVLWVLPDSYLDVPNKDY 170
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T+++TLR F FG + E ++ D+ + RS+G+ F+ + +E A AA+ E
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSR 270
MN + +G I VD A P R
Sbjct: 63 MNNQEFDGRTIRVDKAADRPSGPR 86
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 54/78 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLS+ T+E L+ AF G +++VK+I ++ +SKGY F+++ +E+ A+AAL +
Sbjct: 125 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 184
Query: 247 MNGKIINGWMIVVDVAKT 264
M G++I+G I V A +
Sbjct: 185 MGGEVIDGRNIRVHYANS 202
>gi|224059524|ref|XP_002299889.1| predicted protein [Populus trichocarpa]
gi|222847147|gb|EEE84694.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 53/81 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+LFV+ LS YT+ L+ F FG + E +++++ + R KG+ F+ + +E A ALK
Sbjct: 8 QLFVSRLSSYTTNHELKRLFSPFGAVSEARLVVESKTLRPKGFGFVTFESEADAHKALKA 67
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+I+NG +I V+VAK T +
Sbjct: 68 MNGRIVNGRLIFVEVAKDTER 88
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 162 GGNNLQNSMVPSDSSEASPT-----QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVK 216
GG +++V + +SP ++ + KLF+ GL + + LR AF FGE+ E +
Sbjct: 8 GGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEAR 67
Query: 217 IIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
+I D+ + RS+G+ F+ Y+ +AA A+ M+GK I+G + V++A P +R
Sbjct: 68 VITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 121
>gi|440791001|gb|ELR12257.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 288
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+ +FV L F T+E+TLR FE FG + ++++ D ++ +SKGYAF+EY E A AA +
Sbjct: 51 RTVFVGRLDFVTNEETLRTTFERFGPIRHLRLVRDIVTGKSKGYAFVEYEHESDAHAAYR 110
Query: 246 EMNGKIINGWMIVVDVAK 263
+M+GK I+ ++V++ +
Sbjct: 111 DMHGKDIDQARVLVEMER 128
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E +L AAF +G + +V +I DK + RS+G+ F++Y E A AL
Sbjct: 6 KLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDA 65
Query: 247 MNGKIINGWMIVVD 260
MNGK ++G I VD
Sbjct: 66 MNGKTLDGRAIRVD 79
>gi|46446527|ref|YP_007892.1| nucleic acid-binding protein [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400168|emb|CAF23617.1| probable nucleic acid-binding protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 112
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
KK+FV LS+ TSE+ L+A FE FG++V KI+ D+++ +SKG+ F+E + A A++
Sbjct: 2 KKIFVGNLSWKTSEEQLKAHFEAFGKVVSAKIVTDQMTGKSKGFGFVEMESANDAENAIR 61
Query: 246 EMNGKIINGWMIVVDVAKTTPKYSRGRPR 274
E+NGK + + V +A+ + R PR
Sbjct: 62 ELNGKPLVDRSLRVSLAQERDRSERREPR 90
>gi|327279532|ref|XP_003224510.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Anolis
carolinensis]
Length = 152
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV +I DK ++RS+G+ FI + E AS A++
Sbjct: 7 KLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 67 MNGESVDGRQIRVDHA 82
>gi|59802525|gb|AAX07506.1| unknown [Gemmata sp. Wa1-1]
Length = 163
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 171 VPSDSSEASPTQIKT--KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKG 228
VPSDS P + +T KKL+V L + +++ LR F +G + ++IMD+ + RSKG
Sbjct: 47 VPSDSGPLGPARCETVGKKLYVGNLGYGVTDEQLRGMFGPYGSVQTAQVIMDRDTGRSKG 106
Query: 229 YAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
+ F+E +++ A AA+ MNG++ G + V+ AK
Sbjct: 107 FGFVEMNSDQEAQAAIAGMNGQMSEGRALTVNEAK 141
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 167 QNSMVPSDSSEASPTQ------IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMD 220
+N++ S+ A P + KLFV GL++ T++ ++ AF FGE+ EVKII D
Sbjct: 17 RNALQRHSSAAAIPAMFLVSRGMSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICD 76
Query: 221 KISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVA-KTTPK 267
+ + RS+G+ F+ + T++ A AAL+ ++G+ + G I V+ A K +P+
Sbjct: 77 RDTGRSRGFGFVTFATDQDAEAALQALDGRDLAGRTIRVNYATKQSPQ 124
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AF FGE+++ K+I D+ + RS+G+ F+ +TTE+A A+
Sbjct: 5 RCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAINA 64
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK I+G I V++A+
Sbjct: 65 MNGKDIDGRTISVNMAQ 81
>gi|90075670|dbj|BAE87515.1| unnamed protein product [Macaca fascicularis]
Length = 135
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+ ++G I VD A + +
Sbjct: 67 MNGESLDGRQIRVDHAGKSAR 87
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 54/78 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLS+ T+E L+ AF G +++VK+I ++ +SKGY F+++ +E+ A+AAL +
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 247 MNGKIINGWMIVVDVAKT 264
M G++I+G I V A +
Sbjct: 98 MGGEVIDGRNIRVHYANS 115
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 56/79 (70%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T +++LR AF FG++V+ ++I+D+ S R +G+ F+ ++ +E A+ A+
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRPRGFGFVNFSDDECANEAI 96
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+ + G I V +A+
Sbjct: 97 KAMDGQELQGRNIRVSIAQ 115
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ TS++ LR FE FG+L E K+++DK S RS+G+ F+ Y ++ A+
Sbjct: 8 RCFVGGLAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKVMEDAIDA 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGIDLDGRTITVDRAQ 84
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 162 GGNNLQNSMVPSDSSEASPT-----QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVK 216
GG +++V + +SP ++ + KLF+ GL + + LR AF FGE+ E +
Sbjct: 8 GGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEAR 67
Query: 217 IIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
+I D+ + RS+G+ F+ Y+ +AA A+ M+GK I+G + V++A P +R
Sbjct: 68 VITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPAGNR 121
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++ V L + SE+ +R AFE FGE+ EV + +DK+S ++KG+AF+ Y + A A E
Sbjct: 214 RILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNE 273
Query: 247 MNGKIINGWMIVVDVAKTTP 266
M+G++I G +I V+ AK P
Sbjct: 274 MDGQVIKGRIIHVNYAKADP 293
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++ V GL +EKT++ AF+ FG + + K++ K S+ +AF+ ++TE A A+++
Sbjct: 3 RIIVKGLPHVATEKTIKEAFQSFGNITDCKLVRTK-EGVSREFAFLGFSTESEAQNAIEK 61
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRP 273
MN I I V +AK S RP
Sbjct: 62 MNNAYILSSKINVSIAKKIGDKSIERP 88
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 141 GVPGVLSVQPDENFGSENK---DYGGNNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYT 197
GVP L P+ F E K + ++ P + E + T L++ ++ T
Sbjct: 459 GVPLYLEWAPERLFNEEAKSTEEEVPKKVEKKESPKEGGELELVEEGTHTLYIKNVNPKT 518
Query: 198 SEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMI 257
+E TLR F +G++ V I + S ++ + F+E+ +A A+K G++++G I
Sbjct: 519 TEDTLRKVFTQYGQIHSVSISKNPTSSKN-VFCFLEFARHSSALNAMKNAQGQLVDGNAI 577
Query: 258 VVDVA 262
++++
Sbjct: 578 AIELS 582
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL V L F T+ +R F +G L V++ KI + KGYAFIEY T++ A+ A
Sbjct: 605 KLLVKNLPFETNLNEVRELFRVYGTLRGVRV-PKKIDGQLKGYAFIEYATKQEAANAKAA 663
Query: 247 MNGKIINGWMIVVDVAKTT 265
M + G +V++ AK T
Sbjct: 664 MANSHLYGRHLVIEFAKET 682
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 56/82 (68%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+ +FV +SF T+E LRAAFE +GE+ ++I+ D+ + +++G+AF+E T +E A+ A+
Sbjct: 2 RNVFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIA 61
Query: 246 EMNGKIINGWMIVVDVAKTTPK 267
+NG ++G + V+ AK P+
Sbjct: 62 GLNGTQLDGRALNVNEAKPKPQ 83
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 162 GGNNLQNSMVPSDSSEASPT-----QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVK 216
GG +++V + +SP ++ + KLF+ GL + + LR AF FGE+ E +
Sbjct: 8 GGLLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEAR 67
Query: 217 IIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRGRP 273
+I D+ + RS+G+ F+ Y+ +AA A+ M+GK I+G + V++A P S P
Sbjct: 68 VITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANERPLRSTSPP 124
>gi|148684930|gb|EDL16877.1| mCG114434 [Mus musculus]
Length = 153
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSQGFDFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ TLR+ FE FG + E +I D+ + RS+G+ F+ ++T+ A AA++
Sbjct: 3 KLFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIEG 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MN + +G +I VD A SRG
Sbjct: 63 MNNQDFDGRVIRVDRASNNAS-SRG 86
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ LFV+GLS T+ LR AF FGE+ ++I D+++ SKG+ F+ Y T E A+ +
Sbjct: 47 SPNLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGI 106
Query: 245 KEMNGKIINGWMIVVDVAKTTP 266
+ M+G+ ++GW+I + A+ P
Sbjct: 107 EGMDGEFLDGWVIFAEYARPRP 128
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV LS+ T+E ++ FE +G + V+++ DK + + +GYAFIEY AA K
Sbjct: 141 KTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYK 200
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ I+G ++VDV +T P + RPR
Sbjct: 201 QADGRKIDGRRVLVDVERGRTVPNW---RPR 228
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
KKL+V LS+ TSE +LR F FG + KII D+ + SKG+ F+E +T+E ASAA+
Sbjct: 23 AKKLYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFVEMSTDEEASAAI 82
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSR 270
NG+ G + V+ A P+ R
Sbjct: 83 AGTNGREFEGRQLRVNEAMDKPRRER 108
>gi|148695099|gb|EDL27046.1| mCG129611 [Mus musculus]
Length = 172
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL V GL+F T E+ L F FG + EV ++ D+ ++RS G+ FI +T E AS A++
Sbjct: 26 KLVVGGLNFNTHEQALENYFSSFGPISEVVVVKDRETQRSWGFGFITFTNPEHASDAMRA 85
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + + SRG
Sbjct: 86 MNGESLDGRQIRVDHAGKSARGSRG 110
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 58/80 (72%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ GLS+ T + +LR AF +GE++E ++I+D+ + RS+G+ F+ +T+ E AS+
Sbjct: 37 MSSSKLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASS 96
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A++ ++G+ ++G + V+ A
Sbjct: 97 AIQALDGQDLHGRRVRVNYA 116
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T+++TLR F FG + E ++ D+ + RS+G+ F+ + +E A AA+ E
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSR 270
MN + +G I VD A P R
Sbjct: 63 MNNQEFDGRTIRVDKAADRPSGPR 86
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T+E++L F +G++ EV ++ D+ SKRS+G+ F+ + E A A+
Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TEEA A++
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TEEA A++
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 54/78 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLS+ T+E L+ AF G +++VK+I ++ +SKGY F+++ +E+ A+AAL +
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 247 MNGKIINGWMIVVDVAKT 264
M G++I+G I V A +
Sbjct: 98 MGGEVIDGRNIRVHYANS 115
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TEEA A++
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TEEA A++
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|255585455|ref|XP_002533421.1| RNA binding protein, putative [Ricinus communis]
gi|223526734|gb|EEF28964.1| RNA binding protein, putative [Ricinus communis]
Length = 152
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++ V L + E +L+ F FGE+ EVK++ D KRSK + FI+YT ++ A A++
Sbjct: 45 RIIVKNLGYSVGESSLQKEFSNFGEIAEVKLVKDDERKRSKAFVFIQYTCQDDAILAMEN 104
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
M+ KI +G +I VD+AK + RG P+
Sbjct: 105 MDRKIFDGRLIYVDLAKPGKETFRGYPK 132
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV+ LSF T+EKTL+ FE FGE+ V I+ D + + +GYAFIE+ E A K
Sbjct: 100 KTLFVSRLSFDTTEKTLKHEFEAFGEVKSVSIVKDLKTGKPRGYAFIEFEHERDMKIAYK 159
Query: 246 EMNGKIINGWMIVVDVAK 263
+ G I+G I+VDV +
Sbjct: 160 DAEGLKIDGRRILVDVER 177
>gi|410340767|gb|JAA39330.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340769|gb|JAA39331.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340771|gb|JAA39332.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340773|gb|JAA39333.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340775|gb|JAA39334.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340777|gb|JAA39335.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI + E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFPIPEHASVAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG+ ++G I VD A + +
Sbjct: 67 MNGESLDGRQIRVDHAGKSAR 87
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 55/83 (66%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ ++ + F+ GL++ TS++ L+ FE FG+L+E K+++DK S RS+G+ F+ + ++A
Sbjct: 2 SDVEEFRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAM 61
Query: 241 SAALKEMNGKIINGWMIVVDVAK 263
A+ MNG ++G I VD A+
Sbjct: 62 DEAIDAMNGIDLDGRTITVDRAQ 84
>gi|357134159|ref|XP_003568685.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
distachyon]
Length = 250
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%)
Query: 45 KKDYSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTK 104
K YS L+ N N T+L +HWL+ M+ P ++ +MV Y + LT
Sbjct: 54 KSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPTDPKPSEEEMVAAYVKTLTA 113
Query: 105 VLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
V+G+E++A+ IY V + GF + +E + ++ G+PGVL V PD NKDYGG+
Sbjct: 114 VIGSEEEAKKKIYSVCTTTYTGFGALISEELSYKVKGLPGVLWVLPDSYLDVPNKDYGGD 173
>gi|449433509|ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
gi|449490646|ref|XP_004158665.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
Length = 158
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L V L + T+E L+ F FGE+ EV + D+ +KR KGYAFI+YT ++ A AL+
Sbjct: 46 RLMVRNLPYSTNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQYTCQDDAMLALET 105
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
M+ KI +G MI V++A G PR
Sbjct: 106 MDCKIFDGRMIYVEIATPGSGSFGGYPR 133
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LF++GLS T+ L+ AF FGE++ +++ D+++ SKG+ FI Y T E A+ ++ M
Sbjct: 38 LFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKGIEGM 97
Query: 248 NGKIINGWMIVVDVAK 263
+GK ++GW+I + A+
Sbjct: 98 DGKFLDGWVIFAEYAR 113
>gi|431915005|gb|ELK15824.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 390
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G ++EV ++ D+ + RS+G+AFI + E A A
Sbjct: 6 RPGKLFIGGLNIDTNEKALEAVFGKYGPIIEVLLMKDRETNRSRGFAFITFENPEDAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTT------------PKYSRGRPR 274
K+MNGK ++G +I V+ A P +RG PR
Sbjct: 66 TKDMNGKSLDGKLIKVEQANKPTFQSGGRRRPPFPSRNRGHPR 108
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TEEA A++
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|356549679|ref|XP_003543219.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Glycine max]
Length = 401
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HWLV M+KP G T+ ++D Y + L KV+G+E++A+M IY VS + F F + +E
Sbjct: 95 EHWLVVMEKP-EGDPTRDDIIDSYIKTLAKVIGSEEEARMKIYSVSTRHYFAFGALVSEE 153
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGG 163
+ ++ +PGV V PD + KDYGG
Sbjct: 154 LSYKIKELPGVRWVLPDSYLNVKEKDYGG 182
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 1 MCIYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
M IY S +F F V EE S ++ LPGV V PD N +KDY
Sbjct: 133 MKIYSVSTRHYFAFGALVSEELSYKIKELPGVRWVLPDSYLNVKEKDY 180
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL++ T++ ++ AF FGE+ EVKII D+ + RS+G+ F+ + T++ A AAL+
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
Query: 247 MNGKIINGWMIVVDVA-KTTPK 267
++G+ + G I V+ A K +P+
Sbjct: 103 LDGRDLAGRTIRVNYATKQSPQ 124
>gi|222612603|gb|EEE50735.1| hypothetical protein OsJ_31052 [Oryza sativa Japonica Group]
Length = 118
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ G+S+ T +++L+ AF +GE++E ++I+D+ + RS+G+ F+ YT+ + A+A
Sbjct: 28 MSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAA 87
Query: 243 ALKEMNGKI----INGW 255
A+ M+GK+ ++GW
Sbjct: 88 AITGMDGKVMDESLSGW 104
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 55/79 (69%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T +++LR AF FG++V+ +I+D S RS+G+ F+ ++ +E A+ A+
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDAGVIVDGDSGRSRGFGFVNFSDDECANEAI 96
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+ + G I V +A+
Sbjct: 97 KAMDGQELQGRNIRVSIAQ 115
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 60/89 (67%)
Query: 175 SSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEY 234
+S + T+ + ++FV+ LSFYT+E+ L+ F FG + E +++ D + R KG+ F++Y
Sbjct: 15 ASRVAGTKGFSTEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKY 74
Query: 235 TTEEAASAALKEMNGKIINGWMIVVDVAK 263
+++ AA A+K M+G+II G +I V+ AK
Sbjct: 75 SSQVAAEKAVKAMDGRIIRGRIIFVETAK 103
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GL++ TS++ L+ AFE +G+LVE K+++DK S RS+G+ F+ + +EA A++
Sbjct: 230 RCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEA 289
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 290 MNGIDLDGRTITVDKAQ 306
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRG 92
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T E++L F +G++ EV ++ D+ +KRS+G+ F+ + E A A++
Sbjct: 8 KLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDAMEA 67
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 68 MNGKSVDGRQIRVDQA 83
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ LS+ TS++ L+ AFE FG LV+ K+++DK S RS+G+ F+ + + A A++
Sbjct: 8 RCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMEDAIEA 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGMDLDGRAITVDKAQ 84
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLS+ EK+L+ AF FG++ EV+I+ DK S R++G+ F+ ++ E+AA +A
Sbjct: 37 KLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDA 96
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
M+GK + G + ++ A P+
Sbjct: 97 MDGKALLGRPLRINFALEKPR 117
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 55/83 (66%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
+ ++ + F+ GL++ TS++ L+ FE FG+L+E K+++DK S RS+G+ F+ + ++A
Sbjct: 2 SDVEEYRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAM 61
Query: 241 SAALKEMNGKIINGWMIVVDVAK 263
A+ MNG ++G I VD A+
Sbjct: 62 DEAIDAMNGMDLDGRTITVDRAQ 84
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF FGE++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF FGE++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRG 92
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|449522498|ref|XP_004168263.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like,
partial [Cucumis sativus]
Length = 278
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 43 SVKKDYSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQIL 102
S + S L+ N N T+L +HWLV M+KP + T+ +++D Y + L
Sbjct: 70 STRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQL-TRDEIIDSYIKTL 128
Query: 103 TKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYG 162
V+G+E++A+M IY VS + F F C + +E + ++ +P V V PD +NKDYG
Sbjct: 129 AMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYG 188
Query: 163 G 163
G
Sbjct: 189 G 189
>gi|426245729|ref|XP_004016657.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Ovis
aries]
Length = 174
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T EK+L AAF +G + EV ++ D+ + +S+G+AFI + + A AA+++
Sbjct: 9 KLFIGGLNHETDEKSLEAAFGKYGHISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGR 272
MNGK ++G I V A T P + GR
Sbjct: 69 MNGKSLDGKAIKVAQA-TKPAFESGR 93
>gi|375012528|ref|YP_004989516.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
gi|359348452|gb|AEV32871.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
Length = 111
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L + T E+ LR AFE +GE+ V+II DK + RSKG+ F+E ++AA A+ E+
Sbjct: 3 IFVGSLPWATEEEDLRGAFEAYGEVDSVRIITDKFTGRSKGFGFVEMPDDDAAQKAIDEL 62
Query: 248 NGKIINGWMIVVDVAKTTPK 267
NG G IVV+ ++ P+
Sbjct: 63 NGSQFGGRDIVVNKSEPKPQ 82
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRG 92
>gi|255648267|gb|ACU24586.1| unknown [Glycine max]
Length = 249
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ M+ P ++ MV+ Y + L +VLG
Sbjct: 62 YSPLNDPFPNWSNRPPKETILLDGCDYEHWLIVMEFPDNPKPSEDHMVNAYVKTLAQVLG 121
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E+DA+ IY VS + GF + +E + ++ +PGVL V PD NKDYGG+
Sbjct: 122 SEEDAKNKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 178
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 130 IYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDY 175
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLFV GL+ T+EK L A F +G +VEV ++ D+ +++S+G+AFI + + A A
Sbjct: 6 RPGKLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETRKSRGFAFITFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK+++G I V+ A
Sbjct: 66 ARDMNGKLLDGKSIKVEQA 84
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 34 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 93
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 94 MNGKSVDGRQIRVDQAGKSSDNRSRG 119
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T ++TLR+ FE FG + E ++ D+ + RS+G+ F+ Y E A AA++
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 247 MNGKIINGWMIVVDVAKTTP 266
MN + +G I VD A P
Sbjct: 63 MNNEEFDGRRIRVDKASDRP 82
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E++L AAF +G + +V +I D+ +++S+G+ F++Y E A A+
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMDG 65
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ ++G I VD A + SRG
Sbjct: 66 MNGQTLDGRTIRVDEAGKGGR-SRG 89
>gi|399031232|ref|ZP_10731328.1| RRM domain-containing RNA-binding protein [Flavobacterium sp.
CF136]
gi|398070499|gb|EJL61796.1| RRM domain-containing RNA-binding protein [Flavobacterium sp.
CF136]
Length = 119
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L F E LR +FE +G + VKII DK + RSKG+ F+E T ++ A A+ E+
Sbjct: 3 IFVGSLPFSIEEADLRESFEAYGAVDSVKIITDKFTGRSKGFGFVEMTNDDEAQKAIDEL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSR 270
NG + G IVV+ ++ P+ R
Sbjct: 63 NGATVQGRAIVVNKSEPKPEGER 85
>gi|381186866|ref|ZP_09894434.1| RNA-binding region RNP-1 [Flavobacterium frigoris PS1]
gi|379651172|gb|EIA09739.1| RNA-binding region RNP-1 [Flavobacterium frigoris PS1]
Length = 120
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L F E LR +FE +G + VKII DK + RSKG+ F+E T ++ A A+ E+
Sbjct: 3 IFVGSLPFSIEEADLRESFEAYGAVDSVKIITDKFTGRSKGFGFVEMTNDDEAQKAIDEL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSR 270
NG + G IVV+ ++ P+ R
Sbjct: 63 NGATVQGRAIVVNKSEPKPEGER 85
>gi|55778182|gb|AAH86491.1| Rbm3 protein [Mus musculus]
Length = 128
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 67 MNGESLDGRQIRVDHA 82
>gi|327279534|ref|XP_003224511.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Anolis
carolinensis]
Length = 231
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV +I DK ++RS+G+ FI + E AS A++
Sbjct: 86 KLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDAMRA 145
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 146 MNGESVDGRQIRVDHA 161
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVAKTTP 266
MNGK ++G I VD A +P
Sbjct: 67 MNGKSVDGRQIRVDQAGKSP 86
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVAKTTP 266
MNGK ++G I VD A +P
Sbjct: 67 MNGKSVDGRQIRVDQAGKSP 86
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRG 92
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRG 92
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 54 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 113
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 114 MNGKSVDGRQIRVDQAGKSSDNRSRG 139
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 168 NSMVPSDSSEASPTQIKT--KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKR 225
N P+ ++++ T+ T K++V L + ++ +L++ F FGE+ K++MD+ + R
Sbjct: 9 NPRTPATRADSALTERLTMSSKIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGR 68
Query: 226 SKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRG 271
SKG+AF+E +T A AA+ +NG+ ++G IVV++A+ P+ RG
Sbjct: 69 SKGFAFVEMSTPAFAQAAIDGLNGQSVDGRSIVVNLAR--PREDRG 112
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 38 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 97
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 98 MNGKSVDGRQIRVDQAGKSSDNRSRG 123
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LF++GLS T+ L+ AF FGE++ +++ D+++ SKG+ F+ Y T E A+ ++ M
Sbjct: 38 LFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGM 97
Query: 248 NGKIINGWMIVVDVAK 263
+GK ++GW+I + A+
Sbjct: 98 DGKFLDGWVIFAEYAR 113
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 54/77 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L++ L++ ++++LRAAFE FG + + K++ D+ S+RSKG+ F+ + +E A A++E
Sbjct: 3 RLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 247 MNGKIINGWMIVVDVAK 263
MN + + G I VDV+K
Sbjct: 63 MNEQELEGRRIKVDVSK 79
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
Length = 130
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL++ + TLR AF +GE+ E ++IMD+ + RS+G+ F+ + + A AA++
Sbjct: 11 KLFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQG 70
Query: 247 MNGKIINGWMIVVDVAKTTPKYSR 270
M+G + G I VD A P R
Sbjct: 71 MDGHELGGRSIRVDYASDRPSAPR 94
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF FGE++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V L + +E +LR FE FG++ K+++D+IS RSKG+AF++ + +E AA++++
Sbjct: 3 IYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKL 62
Query: 248 NGKIINGWMIVVDVAK-TTPKYSRGR 272
NG ++G IVV+ AK P+ S+ R
Sbjct: 63 NGHELDGRTIVVNKAKPRAPRDSKPR 88
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|242046266|ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
gi|241924381|gb|EER97525.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
Length = 83
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 55/79 (69%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ ++FV+ LSFYT+E+ + F FG + E +++ D+ + R KG+ F++Y+++ A A+
Sbjct: 5 STEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAEKAV 64
Query: 245 KEMNGKIINGWMIVVDVAK 263
K M+G+I+ G +I V++AK
Sbjct: 65 KAMDGRILRGRLIFVEMAK 83
>gi|116792226|gb|ABK26281.1| unknown [Picea sitchensis]
Length = 274
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HWL+ M+ P G T+ +++D Y + L +++G+E++A+M IY VS + F F C + +E
Sbjct: 105 EHWLIVMEPPE-GNPTRDEIIDSYIKTLAQIVGSEEEARMKIYSVSTKHYFAFGCLVSEE 163
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSM-VPSD 174
+ ++ +P V V PD KDYGG N VP D
Sbjct: 164 LSYKIKPLPNVRWVLPDSYLDPRTKDYGGEPFINGQAVPYD 204
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L+V L F SE LR FE +G++ E+ +I+DK++ +S+G+AF+ T +AA +A+
Sbjct: 5 RLYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAIDS 64
Query: 247 MNGKIINGWMIVVDVAKTTPKYSR 270
+NG I+G IVV+ AK P+ R
Sbjct: 65 LNGTSISGRQIVVNEAK--PREER 86
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK+L A F +G + EV ++ D+ + +S+G+AFI + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
+++MNGK ++G I V A T P + GR
Sbjct: 66 VRDMNGKSLDGKAIKVAQA-TKPAFESGR 93
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|260796311|ref|XP_002593148.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|260796325|ref|XP_002593155.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
gi|229278372|gb|EEN49159.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|229278379|gb|EEN49166.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
Length = 88
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
K+FV GL+ T+E TL F +G++VEV ++ DKI+ RS+G+ FI + A A+KE
Sbjct: 9 KIFVAGLNLETNETTLEKLFNKYGKIVEVLLMKDKITARSRGFGFITFENPRDAEVAVKE 68
Query: 247 MNGKIINGWMIVVDVAKTTP 266
MNG+ I G +I VD A T P
Sbjct: 69 MNGQDIAGKVIKVDRA-TKP 87
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|397467532|ref|XP_003805466.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Pan
paniscus]
Length = 393
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ +KLFV GL+ T EK L+A F +G +++V +I D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPEKLFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVV 259
++MNGK ++G I+V
Sbjct: 66 ARDMNGKYLDGKAIMV 81
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ TSEK L A F FG + EV ++ D+ + +S+G+AF+ Y A A
Sbjct: 6 RPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPSDAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
+EMNGK ++G I V+ A T P++
Sbjct: 66 AREMNGKPLDGKPIKVEQA-TKPQF 89
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + K+FV G+S+ T E LR AF +GE+V+ KII+D+ + RS+G+AF+ +T+ E AS
Sbjct: 31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ +++G+ ++G I V+ A
Sbjct: 91 AM-QLDGQDLHGRRIRVNYA 109
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLS+ T+E++L AF +G + +V +I D+ + RS+G+ F+ + E A A+
Sbjct: 6 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G MI VD A
Sbjct: 66 MNGKQVDGRMIRVDEA 81
>gi|356521827|ref|XP_003529552.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Glycine max]
Length = 249
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ M+ P ++ MV+ Y + L +VLG
Sbjct: 62 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPDNPKPSEDHMVNAYVKTLAQVLG 121
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E+DA+ IY VS + GF + +E + ++ +PGVL V PD NKDYGG+
Sbjct: 122 SEEDAKNKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 178
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 130 IYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDY 175
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + K+FV G+S+ T E LR AF +GE+V+ KII+D+ + RS+G+AF+ +T+ E AS
Sbjct: 31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ +++G+ ++G I V+ A
Sbjct: 91 AM-QLDGQDLHGRRIRVNYA 109
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 8/95 (8%)
Query: 170 MVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGY 229
M SD +E + FV LS+ T ++ L AAF FGE+++ KII D+ + RS+G+
Sbjct: 1 MAESDGAE--------YRCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGF 52
Query: 230 AFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
F+ ++ E+A A++ MNGK ++G IVV+ A++
Sbjct: 53 GFVSFSNEQAMQDAIEGMNGKELDGRSIVVNEAQS 87
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 14 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 73
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 74 MNGKELDGRNITVNEAQS 91
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|355704773|gb|EHH30698.1| RNA-binding motif protein 3 [Macaca mulatta]
Length = 157
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 247 MNGKIINGWMI-VVDVAKTT 265
MNG+ ++G I V V K+
Sbjct: 67 MNGESLDGRQIRVAHVGKSA 86
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRG 92
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 72 MNGKELDGRNITVNEAQS 89
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 72 MNGKELDGRNITVNEAQS 89
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|327279530|ref|XP_003224509.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 148
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E+ L F +G++ EV ++ D+ ++RS+G+ FI Y E A A++
Sbjct: 7 KLFIGGLSFDTNEQNLEQLFSPYGDIAEVVVVKDRETQRSRGFGFITYCRPEDAKDAMRA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I VD A
Sbjct: 67 MNGESVDGRQIRVDQA 82
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 13 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 72
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 73 MNGKELDGRNITVNEAQS 90
>gi|47086837|ref|NP_997763.1| RNA-binding motif protein, X chromosome [Danio rerio]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|29436819|gb|AAH49509.1| RNA binding motif protein, X-linked [Danio rerio]
gi|47846286|emb|CAG30733.1| RNA binding motif protein [Danio rerio]
gi|48735158|gb|AAH71326.1| RNA binding motif protein, X-linked [Danio rerio]
Length = 379
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ TSEK L A F FG + EV ++ D+ + +S+G+AF+ Y A A
Sbjct: 6 RPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
+EMNGK ++G I V+ A T P++
Sbjct: 66 AREMNGKPLDGKPIKVEQA-TKPQF 89
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L++ T+E ++ FE +G + V++I DK + + +GYAFIEY AA K
Sbjct: 138 KTLFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKPRGYAFIEYMHTRDMKAAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ ++G ++VDV +T P + RPR
Sbjct: 198 QADGRKLDGRRVLVDVERGRTVPNW---RPR 225
>gi|297736978|emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++F+ GL T E +L+ AF FGE+ +V+I +KIS + G+AF +TTEE+A A+K
Sbjct: 65 RIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVKM 124
Query: 247 MNGKIINGWMIVVDVAKTTP 266
M+GK +G + V +AK P
Sbjct: 125 MDGKFFHGRFVFVKIAKPGP 144
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 19 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 78
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 79 MNGKSVDGRQIRVDQAGKSSDNRSRG 104
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 3 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 62
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 63 MNGKELDGRNITVNEAQS 80
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 11 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 70
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 71 MNGKELDGRNITVNEAQS 88
>gi|406944721|gb|EKD76419.1| hypothetical protein ACD_43C00118G0001 [uncultured bacterium]
Length = 84
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV G++F +++ TLR AF G +V KIIMDK++ RS+G+ F+E +T E A AA++
Sbjct: 5 LFVGGIAFKSTDDTLREAFMQAGNVVSAKIIMDKMTGRSRGFGFVEMSTPEEAQAAIQMW 64
Query: 248 NGKIINGWMIVVDVAKTTPK 267
+GK ++G I V A+ K
Sbjct: 65 DGKELDGRRIAVKEAQPREK 84
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 54/77 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L++ L++ ++++L+AAFE FG + + K++ D+ S+RSKG+ F+ + +E A A++E
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 247 MNGKIINGWMIVVDVAK 263
MN + + G I VDV++
Sbjct: 63 MNEQELEGRRIKVDVSR 79
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL+V LS+ SE + F FGE++ KII D+ + +SKG+ F+E+ +EAA A+KE
Sbjct: 2 KLYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKE 61
Query: 247 MNGKIINGWMIVVDVAK----TTPKYSRGR 272
+NG G IVV+ AK P+ S+ R
Sbjct: 62 LNGSNFEGRSIVVNEAKPMEDRPPRRSKTR 91
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDSRSRG 92
>gi|339240627|ref|XP_003376239.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316975057|gb|EFV58516.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 294
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
PS + +AS KT LFV LS+ T+E LR FE +G + ++ +I D I+ +S+GYAF
Sbjct: 90 PSANDKASTDPFKT--LFVARLSYDTTETKLRREFEVYGPIKKIYMITDIITGKSRGYAF 147
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
IEY E AA K +GK I+ ++VDV +
Sbjct: 148 IEYEHEADMHAAYKHADGKKIDKRRVLVDVER 179
>gi|242055771|ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 56/78 (71%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LF+ GLS+ T+E L+ AF +G+++ V++I + +SKG+ F+++++E A+AAL+++
Sbjct: 61 LFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAALQKL 120
Query: 248 NGKIINGWMIVVDVAKTT 265
NG++++G I V A +T
Sbjct: 121 NGQVLDGRNIRVHYANST 138
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ GLS+ TS++ L+ FE FG L+E K+++DK S RS+G+ F+ + ++A A++
Sbjct: 8 RCFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|440912647|gb|ELR62200.1| Heterogeneous nuclear ribonucleoprotein G, partial [Bos grunniens
mutus]
Length = 206
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T EK+L A F +G + EV ++ D+ + +S+G+AFI + + A AA+++
Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGR 272
MNGK ++G I V A T P + GR
Sbjct: 69 MNGKSLDGKAIKVAQA-TKPAFESGR 93
>gi|402086968|gb|EJT81866.1| hypothetical protein GGTG_01840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 192
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T E TLR FE FG + E ++ D+ + RS+G+ F+ YT E+ A A+
Sbjct: 3 KLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQRAISA 62
Query: 247 MNGKIINGWMIVVDVAKTT 265
MN +G I VD A T
Sbjct: 63 MNNVEFDGRTIRVDKASDT 81
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|357127016|ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 161 YGGNNLQNSMVP-SDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIM 219
+GG L +S +P + S KLFV GLS+ T+E L+ AF G + EVK+I
Sbjct: 4 WGGKALASSTIPLRNLLNRSANFSSCSKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVIC 63
Query: 220 DKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
++ RSKGY F+++++E A+AAL++M+ ++++G I V A +
Sbjct: 64 HPVTGRSKGYGFVKFSSESEAAAALEKMSNELLDGRNIRVHYANS 108
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|146299063|ref|YP_001193654.1| RNP-1 like RNA-binding protein [Flavobacterium johnsoniae UW101]
gi|146153481|gb|ABQ04335.1| RNP-1 like RNA-binding protein [Flavobacterium johnsoniae UW101]
Length = 114
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L F E LR +FE +G + VKII DK + RSKG+ F+E + A A+ E+
Sbjct: 3 IFVGSLPFSIEEADLRESFEAYGTVDSVKIITDKFTGRSKGFGFVEMPNDSEAQKAIDEL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSR 270
NG +++G IVV+ ++ P+ R
Sbjct: 63 NGAVVSGRTIVVNKSEPKPEGER 85
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
PS+ S+ S KT LFV ++F TSE LR FE +G + + I+ D S + +GYAF
Sbjct: 90 PSNDSKISGDPFKT--LFVGRINFDTSEGKLRREFESYGPVKRINIVSDPKSGKPRGYAF 147
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
+EY E +A K +GK I+G +VVDV +
Sbjct: 148 VEYENERDMHSAYKYADGKKIDGKRVVVDVER 179
>gi|395802857|ref|ZP_10482109.1| RNP-1 like RNA-binding protein [Flavobacterium sp. F52]
gi|395435298|gb|EJG01240.1| RNP-1 like RNA-binding protein [Flavobacterium sp. F52]
Length = 114
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L F E LR +FE +G + VKII DK + RSKG+ F+E + A A+ E+
Sbjct: 3 IFVGSLPFSIEEADLRESFEAYGTVDSVKIITDKFTGRSKGFGFVEMPNDSEAQKAIDEL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSR 270
NG +++G IVV+ ++ P+ R
Sbjct: 63 NGAVVSGRTIVVNKSEPKPEGER 85
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 179 SPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEE 238
SP+ KLFV GLS+ EK+L+ AF FGE+ EV+I+ DK S RS+G+ F+ ++ E
Sbjct: 18 SPSPPPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKEN 77
Query: 239 AASAALKEMNGKIINGWMIVVDVA 262
A A M+GK + G + + A
Sbjct: 78 EAVCAKDAMDGKALLGRPLRISFA 101
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T E+ L F +G++ EV ++ D+ ++RS+G+ F+ + E A A++
Sbjct: 8 KLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDAMEA 67
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 68 MNGKSVDGRQIRVDQA 83
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|356564316|ref|XP_003550401.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Glycine max]
Length = 247
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ M+ P ++ MV+ Y + L +VLG
Sbjct: 60 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPDNPKPSEDHMVNSYVKTLAQVLG 119
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E++A+ IY VS + GF + +E + ++ +PGVL V PD NKDYGG+
Sbjct: 120 SEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 176
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 128 IYSVSTSTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDY 173
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 167 QNSMVPSDSSEASPT-----QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDK 221
+++ S S+ ++P ++ + KLFV GLS+ T +++L+ AF FGE+VE ++I D+
Sbjct: 13 HSALASSASTGSTPAMFNAARLMSTKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDR 72
Query: 222 ISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
+ +S+G+ F+ ++ + A A+ M+G+ + G I V+ A P +R
Sbjct: 73 DTGKSRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFANERPAGNR 121
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 13/124 (10%)
Query: 136 AQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSMVPSDSSEASPTQIKTKKLFVTGLSF 195
Q+L G+P +SVQP + K+ GN+ M+PSD +L+V L F
Sbjct: 228 GQKLLGIP--ISVQPTQ----AEKNRQGNSTAPMMMPSDMRGPM-------RLYVGSLHF 274
Query: 196 YTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGW 255
+E LR FE FG++ +++IMD + RSKGY FI + + + A AL+++NG + G
Sbjct: 275 NITEDMLRGIFEPFGKIDSIQLIMDPETGRSKGYGFITFHSADDAKKALEQLNGFELAGR 334
Query: 256 MIVV 259
+ V
Sbjct: 335 PMKV 338
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV LS+ T+E ++ FE +G + V+++ DK + +GYAFIEY AA K
Sbjct: 141 KTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYK 200
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ I+G ++VDV +T P + RPR
Sbjct: 201 QADGRKIDGRRVLVDVERGRTVPNW---RPR 228
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 19 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 78
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 79 MNGKSVDGRQIRVDQAGKSSDNRSRG 104
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ LS+ TS++ L+ AFE FG LV+ K+++DK S RS+G+ F+ + + A A++
Sbjct: 7 RCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAMEDAIEA 66
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 67 MNGVDLDGRDITVDKAQ 83
>gi|449439327|ref|XP_004137437.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 168
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ K+FV GLS+ + + TLR AF +GE+VE +++MD + R KG+ F+ ++ +E AS+
Sbjct: 67 VSGSKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASS 126
Query: 243 ALKEMNGKIINGWMIVVDVAKTTPKYSRGRPR 274
A+K ++GK + G I + A K +RG R
Sbjct: 127 AIKALDGKDLGGRRIRCNYA--VEKVARGGGR 156
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF +GE++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF +GE++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV LS+ T+E ++ FE +G + V+++ DK + +GYAFIEY AA K
Sbjct: 141 KTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYK 200
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ I+G ++VDV +T P + RPR
Sbjct: 201 QADGRKIDGRRVLVDVERGRTVPNW---RPR 228
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + L+AAF +GE+++ KII D+ + RS+G+ F+ + +EE+ A++E
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G + V+ A++
Sbjct: 67 MNGKELDGRQVTVNEAQS 84
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE FG + ++ I+ +KI+ + +GYAF+EY E +A K
Sbjct: 102 KTLFVARVNYDTSESKLRREFEVFGSIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVER 179
>gi|391348809|ref|XP_003748634.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Metaseiulus occidentalis]
Length = 381
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
P+++ +A+ KT LF+ +++ TSE LR FE +G + +V +I IS + +GYAF
Sbjct: 90 PNNNPKATADPFKT--LFIARINYETSEGKLRREFEQYGAIKQVSLIHSSISNKPRGYAF 147
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
IEY E AA K +GK I+ ++VDV +
Sbjct: 148 IEYAHERDMHAAYKHADGKKIDSRRVLVDVER 179
>gi|298707500|emb|CBJ30102.1| Uncharacterized protein [Ectocarpus siliculosus]
Length = 470
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
KK+FV GL + T++++LRA FE +GE+ E ++MDK++++SKGY F+ + + + A AAL
Sbjct: 163 KKIFVRGLPWETNDQSLRAVFEQYGEIAEATVVMDKMTQKSKGYGFVTFKSMDGAHAAL- 221
Query: 246 EMNGKIINGWMIVVDVA 262
E K+I+G + + ++A
Sbjct: 222 ENPEKMIDGRVSLCNLA 238
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEY 234
+ +K+FV GLS+ T+ ++LR F FGEL + + D+ S +SKGY F+ +
Sbjct: 278 VSARKIFVRGLSWDTTTESLRTMFSQFGELEDCVVTTDRASGKSKGYGFVTF 329
>gi|294463467|gb|ADE77263.1| unknown [Picea sitchensis]
Length = 258
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ M+ P + +M+ Y + L V+G
Sbjct: 62 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPKDPKPPEEEMIAAYIKTLASVVG 121
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E++A+ IY VS + GF + +E + ++ G+PGVL V PD NKDYGG+
Sbjct: 122 SEEEAKKKIYSVSTHTYTGFGALISEELSYKVKGLPGVLWVLPDSYIDVPNKDYGGD 178
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 130 IYSVSTHTYTGFGALISEELSYKVKGLPGVLWVLPDSYIDVPNKDY 175
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GLS+ TS++TL AF FG L+E K+++D+ + RS+G+ F+ + +++ A+
Sbjct: 8 RCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAIDS 67
Query: 247 MNGKIINGWMIVVDVAK 263
M+G ++G I VD A+
Sbjct: 68 MHGMSLDGRSITVDRAR 84
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E++L AF +G + +V +I DK + RS+G+ F++Y + E A A+
Sbjct: 6 KLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKSLDGRAIRVDEA 81
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + L+AAF +GE+++ KII D+ + RS+G+ F+ + +EE+ A++E
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 67 MNGKELDGRSITVNEAQS 84
>gi|242077194|ref|XP_002448533.1| hypothetical protein SORBIDRAFT_06g028620 [Sorghum bicolor]
gi|241939716|gb|EES12861.1| hypothetical protein SORBIDRAFT_06g028620 [Sorghum bicolor]
Length = 244
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ M+ P ++ +MV Y + L VLG
Sbjct: 59 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPTDPKPSEEEMVGAYVKTLAAVLG 118
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E++A+ IY V + GF + +E + ++ G+PGVL V PD NKDYGG+
Sbjct: 119 SEEEAKKKIYSVCTSTYTGFGALISEELSYKVKGLPGVLWVLPDSYLDVPNKDYGGD 175
>gi|332298346|ref|YP_004440268.1| RNP-1 like RNA-binding protein [Treponema brennaborense DSM 12168]
gi|332181449|gb|AEE17137.1| RNP-1 like RNA-binding protein [Treponema brennaborense DSM 12168]
Length = 117
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 61/88 (69%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+KK++V L++ T+E TL +AF +GE+V +I DK +++SKG+ FIE + AA AA+
Sbjct: 2 SKKIYVGNLNYRTTEDTLSSAFSQYGEIVSAVVIKDKFTEQSKGFGFIEMADDAAADAAI 61
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSRGR 272
+MNGK ++G + V++A+ P+ SR R
Sbjct: 62 ADMNGKEVDGRRVRVNIAEDKPRTSRPR 89
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 53/77 (68%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ LS+ T++++L+ AF FG + E K+++DK S RS+G+AF+ + ++ AA+++
Sbjct: 8 RCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIED 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGLDLDGRAITVDKAQ 84
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T K+FV GL+F T+E+ L AF +G +V+ I+++K KR KG+ ++ + EE A A
Sbjct: 31 TSKIFVKGLAFSTTEEKLAEAFSQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKAQ 90
Query: 245 KEMNGKIINGWMIVVDV 261
MNGKI++G ++ VD+
Sbjct: 91 IGMNGKILHGRVLYVDM 107
>gi|449451868|ref|XP_004143682.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Cucumis sativus]
gi|449531840|ref|XP_004172893.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Cucumis sativus]
Length = 350
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 25 ELARLPGVLTVRPDPDYNSVKKDYSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKP 84
+ RL LTVR D+ + + S L+ N N T+L +HWL+ M+KP
Sbjct: 58 DFRRLSPALTVR---DF-ATRVASSSLNDPNPNWSNRPPKETILLDGCDFEHWLIVMEKP 113
Query: 85 GVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPG 144
+ T+ +++D Y + L V+G+E++A+M IY VS + F F C + +E + ++ +P
Sbjct: 114 DEQL-TRDEIIDSYIKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPK 172
Query: 145 VLSVQPDENFGSENKDYGGNN-LQNSMVPSD 174
V V PD +NK YGG + VP D
Sbjct: 173 VRWVLPDSYLDVKNKSYGGEPFIHGQAVPYD 203
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 54/75 (72%)
Query: 189 FVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMN 248
FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TEEA A++ MN
Sbjct: 11 FVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMN 70
Query: 249 GKIINGWMIVVDVAK 263
GK ++G I V+ A+
Sbjct: 71 GKELDGRNITVNEAQ 85
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 19 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 79 MNGKELDGRNITVNEAQS 96
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 19 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 79 MNGKELDGRNITVNEAQS 96
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E+ L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V L++ +++ LR+AFE FG++ VKI+ D+ + RS+G+AF+E E A A+ EM
Sbjct: 3 IYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAEM 62
Query: 248 NGKIINGWMIVVDVAK 263
NGK + G +VV+ A+
Sbjct: 63 NGKDLKGRNLVVNEAR 78
>gi|357454123|ref|XP_003597342.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486390|gb|AES67593.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 142
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 192 GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKI 251
GLSFYT+++ L + F FG L E +I D+ ++R KG+ F+ Y +E A A K +NG+I
Sbjct: 66 GLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKALNGRI 125
Query: 252 INGWMIVVDVAK 263
++G +I V+ AK
Sbjct: 126 VDGRLIFVEHAK 137
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E+ L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L+ AF FGE++E KII D+ + RS+G+ F+ ++ E++ A+
Sbjct: 10 RCFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSMRDAIDA 69
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK+++G I V+ A++
Sbjct: 70 MNGKVLDGRNITVNPAQS 87
>gi|312370835|gb|EFR19148.1| hypothetical protein AND_22983 [Anopheles darlingi]
Length = 553
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
T+ K LF+ +++ TSE LR FE +G + ++ +I DK S + +GYAFIEY E
Sbjct: 227 TEDPFKTLFIARINYDTSESKLRREFEMYGNIKKIIMINDKNSGKPRGYAFIEYEHERDM 286
Query: 241 SAALKEMNGKIINGWMIVVDVAKT 264
AA K +GK I+G ++VDV +
Sbjct: 287 HAAYKHADGKKIDGKRVLVDVERA 310
>gi|449439063|ref|XP_004137307.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Cucumis sativus]
Length = 410
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 43 SVKKDYSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQIL 102
S + S L+ N N T+L +HWLV M+KP +T+ +++D Y + L
Sbjct: 70 STRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDE-QLTRDEIIDSYIKTL 128
Query: 103 TKVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYG 162
V+G+E++A+M IY VS + F F C + +E + ++ +P V V PD +NKDYG
Sbjct: 129 AMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKNKDYG 188
Query: 163 G 163
G
Sbjct: 189 G 189
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 57/78 (73%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 66 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 125
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 126 MNGKELDGRNITVNEAQS 143
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 54/78 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T++ L AF FGE+V+ K+I D+ + RS+G+ F+ + E + +AA+KE
Sbjct: 8 RCFVGGLAWATTDGRLEGAFRPFGEVVQSKVISDRETGRSRGFGFVTFADENSMNAAIKE 67
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG+ ++G I V+ A++
Sbjct: 68 MNGQELDGRNITVNQAQS 85
>gi|291384550|ref|XP_002708825.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 359
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L AAF +G ++EV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNPETDEKALEAAFGKYGRIIEVLLMKDRETSKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P Y
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAY 89
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T+E+TLR+ FE FG + E ++ D+ + RS+G+ F+ Y+ +E A A+
Sbjct: 3 KLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAIDA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN +G I VD A
Sbjct: 63 MNNVEFDGRTIRVDRA 78
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T ++L AAF +GE++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E+ L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ TLR F FG + E ++ D+ + RS+G+ F+ ++ E A AAL
Sbjct: 5 KLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADAALNA 64
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G +I VD A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|225435044|ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|297746123|emb|CBI16179.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ ++FVT LS YT+ + L F FG + + ++I D ++R KG+ F+++ +E A AL
Sbjct: 24 SSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAEKAL 83
Query: 245 KEMNGKIINGWMIVVDVAKTT 265
K MNG+I+ G +I V++AKTT
Sbjct: 84 KAMNGRIVRGRLIFVEIAKTT 104
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV+ L++ +SE ++ FE +G + V ++ D+++ + KGYAFIEY AA K
Sbjct: 138 KTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ I+G ++VDV +T P + RPR
Sbjct: 198 QADGQKIDGRRVLVDVERGRTVPNW---RPR 225
>gi|114691840|ref|XP_001139693.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
gi|114691960|ref|XP_001135842.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes verus]
Length = 460
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EKTL+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|226509825|ref|NP_001150518.1| ELAV-like protein 4 [Zea mays]
gi|195639828|gb|ACG39382.1| ELAV-like protein 4 [Zea mays]
gi|414590519|tpg|DAA41090.1| TPA: ELAV-like protein 4 [Zea mays]
Length = 129
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 51/73 (69%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV+GL+ T+ + L+ AF FG+++E ++I D+IS S+G+ F++Y T + A A+K M
Sbjct: 36 LFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGM 95
Query: 248 NGKIINGWMIVVD 260
+GK ++ W+I +
Sbjct: 96 DGKFLDSWVIFAE 108
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV+ L++ +SE ++ FE +G + V ++ D+++ + KGYAFIEY AA K
Sbjct: 138 KTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ I+G ++VDV +T P + RPR
Sbjct: 198 QADGQKIDGRRVLVDVERGRTVPNW---RPR 225
>gi|428185150|gb|EKX54003.1| hypothetical protein GUITHDRAFT_132430 [Guillardia theta CCMP2712]
Length = 162
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
+I KKLFV+G+ F S + LR FE FG + + ++ D+ + RS+G+AFI ++++EAAS
Sbjct: 55 KINDKKLFVSGIPFALSSEDLRETFEKFGPVEDSYVVKDRETGRSRGFAFITFSSKEAAS 114
Query: 242 AALKEMNGKIINGWMIVVDVAKTTPKYSRG---RPR 274
A +N + G + V AK RG RPR
Sbjct: 115 QACSALNESDLGGRTVKVSFAKDRDDQPRGKQDRPR 150
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ TLR F FG + E ++ D+ + RS+G+ F+ +++E A AAL
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNA 64
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G +I VD A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|296217449|ref|XP_002755014.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Callithrix
jacchus]
Length = 394
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
+++MNGK ++G I V A T P +
Sbjct: 66 VRDMNGKTLDGKAIKVAQA-TKPAF 89
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E+ L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV LS+ T+E ++ FE +G + V+++ D S + +GYAFIEY AA K
Sbjct: 139 KTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTESNKPRGYAFIEYLHTRDMKAAYK 198
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ I G ++VDV +T P + RPR
Sbjct: 199 QADGRKIEGRRVLVDVERGRTVPNW---RPR 226
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLFV GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AFI + + A A
Sbjct: 25 RPGKLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDA 84
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK+++G I V+ A
Sbjct: 85 ARDMNGKLLDGKSIKVEQA 103
>gi|213515188|ref|NP_001133716.1| transformer-2 protein homolog beta [Salmo salar]
gi|209155068|gb|ACI33766.1| Splicing factor, arginine/serine-rich 10 [Salmo salar]
Length = 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G L +V I+ D+ S+RS+G+AF+ + E A+ A +
Sbjct: 122 LGVFGLSLYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFEVREDANGAKERA 181
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 182 NGMELDGRRIRVDFSITKRPHTPTPGIYMGRP 213
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV LS+ T++++L+ AF +G++ E K++MDK S RS+G+AF+ + ++A A+++
Sbjct: 8 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG + G I VD A+
Sbjct: 68 MNGLDLEGRAITVDKAQ 84
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|326515676|dbj|BAK07084.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 45 KKDYSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTK 104
+ +S L+ N N T+L +HWL+ M+ P ++ MV Y + LT
Sbjct: 57 RPGHSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPADPKPSEEDMVAAYVKTLTA 116
Query: 105 VLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
VLG+E++A+ IY V + GF + +E + + G+PGVL V PD NKDYGG+
Sbjct: 117 VLGSEEEAKKKIYSVCTTTYTGFGALISEELSYRVKGLPGVLWVLPDSYLDVPNKDYGGD 176
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ K+FV GLS+ T + +LRAAFE FG + E K+I D+ + RS+G+ F+ + A+AA+
Sbjct: 2 SNKIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAI 61
Query: 245 KEMNGKIINGWMIVVDVAK 263
+EM+G ++G I V+ A+
Sbjct: 62 EEMDGVELDGRNIRVNEAQ 80
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL F T E +L AF +G + +V ++ D+ ++RS+G+ F+ + E A A+
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G MI VD A
Sbjct: 66 MNGKSVDGRMIRVDEA 81
>gi|114691838|ref|XP_001139951.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes]
gi|114691958|ref|XP_001136088.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes verus]
gi|410060470|ref|XP_003949299.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J [Pan troglodytes verus]
Length = 497
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EKTL+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|344280641|ref|XP_003412091.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked-like-2-like [Loxodonta africana]
Length = 395
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L AAF +G +VEV ++ D+ + +S+G+AFI + + A AA
Sbjct: 6 RPGKLFIGGLNPETDEKALEAAFGKYGSIVEVLLVKDRETTKSRGFAFITFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVV 259
++MNGK ++G I V
Sbjct: 66 ARDMNGKSLDGKTIKV 81
>gi|410898649|ref|XP_003962810.1| PREDICTED: transformer-2 protein homolog beta-like [Takifugu
rubripes]
Length = 277
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G L +V I+ D+ S+RS+G+AF+ + T E + A +
Sbjct: 116 LGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFETSEDSKEAKEHA 175
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 176 NGMELDGRRIRVDFSITKRAHTPTPGIYMGRP 207
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%)
Query: 179 SPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEE 238
+ ++ + KLFV GLS+ T++ +L+ AF FG++ E ++I D+ S RS+G+ F+ + +
Sbjct: 30 NAARLMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGD 89
Query: 239 AASAALKEMNGKIINGWMIVVDVAKTTP 266
A +A+ M+GK + G I V+ A P
Sbjct: 90 DAKSAMDAMDGKELEGRSIRVNFANERP 117
>gi|218184292|gb|EEC66719.1| hypothetical protein OsI_33054 [Oryza sativa Indica Group]
Length = 117
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 52/69 (75%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ G+S+ T +++L+ AF +GE++E ++I+D+ + RS+G+ F+ YT+ + A+A
Sbjct: 28 MSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAA 87
Query: 243 ALKEMNGKI 251
A+ M+GK+
Sbjct: 88 AITGMDGKV 96
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
Length = 153
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T E TLR FE FGE+ E ++ D+ + RS+G+ F+ Y E+ A A+
Sbjct: 3 KLFIGGLAWHTEEATLRQKFEEFGEVEEAVVVKDRDTGRSRGFGFVRYINEDDAQKAITA 62
Query: 247 MNGKIINGWMIVVDVAKTT 265
MN +G I VD A T
Sbjct: 63 MNNVEFDGRQIRVDKASDT 81
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E+ L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL + GLS T+E++L A F +G +VEV +I D+ + +S+G+AFI + + A A KE
Sbjct: 8 KLLIGGLSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKE 67
Query: 247 MNGKIINGWMIVVDVAKT------------TPKYSRGRPR 274
MNGK ++G I V+ A P +RG PR
Sbjct: 68 MNGKFLDGKTIKVEQANKPSFESGGRQKLQPPARNRGHPR 107
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains: RecName:
Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 55/77 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF +GE++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK ++G I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|395815171|ref|XP_003781108.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Otolemur
garnettii]
Length = 393
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L AAF +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNPETDEKALEAAFGKYGRIVEVLLMKDRETSKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVV 259
++MNGK ++G I V
Sbjct: 66 ARDMNGKSLDGKAIKV 81
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLFV GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AFI + + A A
Sbjct: 6 RPGKLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK+++G I V+ A
Sbjct: 66 ARDMNGKLLDGKSIKVEQA 84
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 157 ENKDYGGNNLQNSMVPSD---SSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELV 213
ENK G + S PS +SE L+V L+ +++ LR FE FG L
Sbjct: 42 ENKSSGNEGERRSTSPSSNQMASEHGDIANPGNNLYVANLAHRVTDEELRQLFEKFGRLE 101
Query: 214 EVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
+ +II+D IS+ S+G+AF+ + AS A++E+NGK I G + V+ AK
Sbjct: 102 KCEIIIDPISRESRGFAFVTFEDVRDASDAVQELNGKDIQGRRMRVEHAK 151
>gi|449465561|ref|XP_004150496.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Cucumis sativus]
Length = 277
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ +D P ++ +MV+ Y + L V+G
Sbjct: 70 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLDFPNDPKPSEEEMVNTYVKTLAAVVG 129
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E++A+ IY VS + GF + +E + ++ +PGVL V PD NKDYGG+
Sbjct: 130 SEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 186
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 138 IYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDY 183
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|427788187|gb|JAA59545.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 449
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE FG + ++ I+ +KI+ + +GYAF+EY E +A K
Sbjct: 102 KTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVER 179
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL F T E +L AF +G + +V ++ D+ ++RS+G+ F+ + E A A+
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G MI VD A
Sbjct: 66 MNGKSVDGRMIRVDEA 81
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL F T E +L AF +G + +V ++ D+ ++RS+G+ F+ + E A A+
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMAA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G MI VD A
Sbjct: 66 MNGKSVDGRMIRVDEA 81
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+++ L++ +E LR AFE FGE+ V+II DK+S +S+G AF+E +E +AA+ +
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKEEGNAAIDGL 62
Query: 248 NGKIINGWMIVVDVA---KTTPKYSRGR 272
NG I G I V+ A K P+ SR R
Sbjct: 63 NGTQIRGREIKVNEALPKKPFPEKSRSR 90
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 134
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ TLR FE FG + E +I D+ + RS+G+ F+ + T+ A AA+
Sbjct: 3 KLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAIDG 62
Query: 247 MNGKIINGWMIVVDVAKTTP 266
MN + +G +I VD A
Sbjct: 63 MNNQEFDGRVIRVDRASNNA 82
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A ++
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGR 272
MNGK ++G I V+ A T P + GR
Sbjct: 69 MNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF +GE++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|114691962|ref|XP_001136007.1| PREDICTED: similar to RBMY1A1 protein isoform 2 [Pan troglodytes
verus]
Length = 390
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EKTL+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV LS+ T+E ++ FE +G + V+++ D S + +GYAFIEY AA K
Sbjct: 135 KTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYK 194
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ I G ++VDV +T P + RPR
Sbjct: 195 QADGRKIEGRRVLVDVERGRTVPNW---RPR 222
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 53/78 (67%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T + +LR+AFE GE+++ K+I+D+ + +S+G+ F+ +++ + A AA
Sbjct: 2 SAKLFVGGLSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAK 61
Query: 245 KEMNGKIINGWMIVVDVA 262
+N ++G I VD A
Sbjct: 62 GALNQTDLDGREIRVDSA 79
>gi|427779523|gb|JAA55213.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 476
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE FG + ++ I+ +KI+ + +GYAF+EY E +A K
Sbjct: 102 KTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVER 179
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 54/77 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L++ L++ ++++L+AAFE FG + + K++ D+ S+RSKG+ F+ + +E A A++E
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 247 MNGKIINGWMIVVDVAK 263
MN + + G I VDV++
Sbjct: 63 MNEQELEGRRIKVDVSR 79
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E+ L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 56/79 (70%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ K+FV GLS+ ++TLR +F FG+++E KII D+ + RS+G+ F+ + + + A+AA+
Sbjct: 38 SSKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAAV 97
Query: 245 KEMNGKIINGWMIVVDVAK 263
+ M+GK + G I V++A+
Sbjct: 98 EAMDGKDLQGRSIRVNIAQ 116
>gi|357146958|ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L++ TSE+ ++ FE +G + V+++ DK++ + +GYAF+EY +A K
Sbjct: 138 KTLFVARLNYETSEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYVHTRDMKSAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ ++ ++VDV +T P + RPR
Sbjct: 198 QADGRKVDNKRVLVDVERGRTVPNW---RPR 225
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+KKLF+ L++ T++ +LRA F GE+ E K++ D+ S RSKG+ F+ Y +E A A+
Sbjct: 2 SKKLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTAI 61
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSRGR 272
KE++ ++G I V+ A+ P+ R R
Sbjct: 62 KELDNSELDGRNIHVNEAR--PREERPR 87
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T E+ L F +G++ EV ++ D+ +KRS+G+ F+ + E A A+
Sbjct: 7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAG 66
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 67 MNGKTVDGRQIRVDQA 82
>gi|212274941|ref|NP_001130982.1| hypothetical protein [Zea mays]
gi|194690622|gb|ACF79395.1| unknown [Zea mays]
gi|413951564|gb|AFW84213.1| hypothetical protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 161 YGGNNLQNSM------VPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVE 214
+ G++L+ S+ +P + +P +LFV GLS+ E++L AF FG + E
Sbjct: 17 HDGHHLRRSLSAAAAKLPDELPPGAPAPTSDSRLFVAGLSWSVDERSLTDAFSSFGTVTE 76
Query: 215 VKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVA 262
V+I+ DK S RS+G+ F+ ++ + A A M+GK++ G + + A
Sbjct: 77 VRIMYDKNSGRSRGFGFVHFSNDNEAKCAKDAMDGKVMLGRPLRISFA 124
>gi|115454617|ref|NP_001050909.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|31712074|gb|AAP68379.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|108710427|gb|ABF98222.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113549380|dbj|BAF12823.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|215692670|dbj|BAG88090.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692827|dbj|BAG88216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625569|gb|EEE59701.1| hypothetical protein OsJ_12125 [Oryza sativa Japonica Group]
Length = 308
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 55/77 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++FV GLSF+T E+ L AF FG++V+ +I++++ ++R +G+ F+ ++ EA +A+KE
Sbjct: 8 RIFVGGLSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTFSDPEAVDSAIKE 67
Query: 247 MNGKIINGWMIVVDVAK 263
M+ + ++G I V+ A+
Sbjct: 68 MHCQELDGRTISVNKAE 84
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Anolis carolinensis]
Length = 384
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPTFETGR 93
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV G++F T E+TL F +G++ EV +I ++ ++RSKG+ F+ + + A AL
Sbjct: 6 KLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDALAG 65
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSR 270
MNGK ++G I VD A K++ SR
Sbjct: 66 MNGKTVDGRQIRVDHAGKSSGNRSR 90
>gi|344924967|ref|ZP_08778428.1| RNA-binding region RNP-1 [Candidatus Odyssella thessalonicensis
L13]
Length = 94
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 57/87 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL+V+ L + +++TL F G +V K+I DK+S RSKG+ F+E +E+ A++A+++
Sbjct: 4 KLYVSNLPYSVNDQTLAQLFGDHGAVVSAKVITDKMSGRSKGFGFVEMESEQQANSAMEK 63
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRP 273
+NG+ +NG + V +A+ + + RP
Sbjct: 64 LNGQDLNGRRMNVAIARPKEEGAERRP 90
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 54/78 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + L+ AF +GE+++ KII D+ + RS+G+ F+ + +EE+ A++E
Sbjct: 7 RCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 67 MNGKELDGRNITVNEAQS 84
>gi|426397155|ref|XP_004064791.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 isoform 2
[Gorilla gorilla gorilla]
Length = 413
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KLFV GL+ T EK L+A F +G +++V ++ D+ + +S+G+AF+ + + A AA +
Sbjct: 8 EKLFVGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAAR 67
Query: 246 EMNGKIINGWMIVVDVA 262
+MNGK ++G I+V A
Sbjct: 68 DMNGKYLDGKAIMVAQA 84
>gi|297263082|ref|XP_001089948.2| PREDICTED: putative RNA-binding protein 3 [Macaca mulatta]
Length = 135
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNG ++G I V A + +
Sbjct: 67 MNGDSLDGRQIRVAHAGKSAR 87
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL F T E +L AF +G + +V ++ D+ ++RS+G+ F+ + E A A+
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G MI VD A
Sbjct: 66 MNGKSVDGRMIRVDEA 81
>gi|327286673|ref|XP_003228054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Anolis carolinensis]
Length = 374
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPTFETGR 93
>gi|374315284|ref|YP_005061712.1| RRM domain-containing RNA-binding protein [Sphaerochaeta pleomorpha
str. Grapes]
gi|359350928|gb|AEV28702.1| RRM domain-containing RNA-binding protein [Sphaerochaeta pleomorpha
str. Grapes]
Length = 92
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
KK++V +S+ TSE+ LR F +G ++ II+D+ ++R KG+ F+E + AA AA+
Sbjct: 2 AKKIYVRNMSYNTSEEELRDLFAQYGTVLSANIIIDRETRRPKGFGFVEMEEDSAAEAAI 61
Query: 245 KEMNGKIINGWMIVVD--VAKTTPKYSRGR 272
+++GK ++G + V+ +AK P Y+ R
Sbjct: 62 SQLDGKDLDGRNLSVNEAIAKPRPSYNNNR 91
>gi|356502762|ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816590 [Glycine max]
Length = 384
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KLFV GL+ T+ +TLR+ F GFGEL E +IMDK + RSKGY F+ + + A ALK
Sbjct: 87 RKLFVRGLAGETTTETLRSVFSGFGELDEAIVIMDKATGRSKGYGFVVFRHVDGAILALK 146
Query: 246 EMNGKIINGWMIVVDV 261
+ + K I+G M V +
Sbjct: 147 DPSKK-IDGRMTVTQL 161
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ +K+FV + F S + L F FGE+ E + DK S +S+G+AF Y TEE A A
Sbjct: 172 VSLRKVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARA 231
Query: 243 ALKEMNGKIINGWMIV----VDVAKTTP 266
+L E K I G ++ VD KT P
Sbjct: 232 SLVEPL-KTIEGHQVICKLAVDNKKTKP 258
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV LS+ T++++L+ AF +G++ E K++MDK S RS+G+AF+ + ++A A+++
Sbjct: 44 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 103
Query: 247 MNGKIINGWMIVVDVAK 263
MNG + G I VD A+
Sbjct: 104 MNGLDLEGRAITVDKAQ 120
>gi|356558254|ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV + YT+++ L+ F FG + + + +D I+KR KG+ F+ + +E A AL+
Sbjct: 8 KLFVHRIMLYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKALRA 67
Query: 247 MNGKIINGWMIVVDVA 262
MNG+I++G +I+V++A
Sbjct: 68 MNGRIVSGRLILVELA 83
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MNGK ++G I VD A K++ SRG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|22022313|dbj|BAC06513.1| transformer-2a [Oryzias latipes]
gi|49204529|dbj|BAD24699.1| transformer-2a3 [Oryzias latipes]
Length = 283
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G L EV I+ D+ S+RS+G+AF+ + E + A ++
Sbjct: 117 LGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQA 176
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 177 NGMELDGRRIRVDFSITKRAHTPTPGIYMGRP 208
>gi|157278157|ref|NP_001098178.1| transformer 2a [Oryzias latipes]
gi|49204524|dbj|BAD24698.1| transformer-2a2 [Oryzias latipes]
gi|49204534|dbj|BAD24700.1| transformer-2a4 [Oryzias latipes]
Length = 186
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G L EV I+ D+ S+RS+G+AF+ + E + A ++
Sbjct: 20 LGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQA 79
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 80 NGMELDGRRIRVDFSITKRAHTPTPGIYMGRP 111
>gi|426397153|ref|XP_004064790.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 isoform 1
[Gorilla gorilla gorilla]
Length = 412
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KLFV GL+ T EK L+A F +G +++V ++ D+ + +S+G+AF+ + + A AA +
Sbjct: 8 EKLFVGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAAR 67
Query: 246 EMNGKIINGWMIVVDVA 262
+MNGK ++G I+V A
Sbjct: 68 DMNGKYLDGKAIMVAQA 84
>gi|242049800|ref|XP_002462644.1| hypothetical protein SORBIDRAFT_02g029455 [Sorghum bicolor]
gi|241926021|gb|EER99165.1| hypothetical protein SORBIDRAFT_02g029455 [Sorghum bicolor]
Length = 150
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HW V M +P G + +++D Y ++L+KV+G+E+ A+ IY VS + F F + +E
Sbjct: 39 EHWFVVM-QPPPGDPAREEIIDSYIKVLSKVVGSEEKARQKIYSVSTRHYFAFGALVSEE 97
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSM-VPSD 174
+ ++ +P V V PD +NKDYGG N VP D
Sbjct: 98 ISHKIKELPNVRWVLPDSYLDVDNKDYGGEPFINGQAVPYD 138
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 28 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 87
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 88 MNGKSVDGRQIRVDQA 103
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T + TLR FE FG++ E ++ D+ + RS+G+ F+ +T E A AA++
Sbjct: 3 KLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN +G I VD A
Sbjct: 63 MNNVEFDGRTIRVDKA 78
>gi|323650232|gb|ADX97202.1| cold-inducible RNA-binding protein [Perca flavescens]
Length = 80
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E++L AAF FG + +V +I D+ + S+G+ F++Y E A A++
Sbjct: 3 KLFIGGLSFDTTEESLAAAFGKFGTIEKVDVIKDRDTGYSRGFGFVKYENSEDAKDAMEG 62
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 63 MNGKTLDGRAIRVDEA 78
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 54/77 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++FV GLS+ T+E+TL AF FG+++E +++ ++ + RS+G+ F+ ++ AA AA++E
Sbjct: 8 RIFVGGLSWDTTERTLERAFSDFGKVIETQVVTERDTGRSRGFGFVTFSEPRAADAAIRE 67
Query: 247 MNGKIINGWMIVVDVAK 263
M+ ++G I V+ A+
Sbjct: 68 MHNGELDGRTISVNKAQ 84
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%)
Query: 180 PTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEA 239
P+ + KLFV GLS+ K+L+ AF FG++ EV I+ DK S RS+G+ F+ ++ E+
Sbjct: 32 PSHASSNKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFGFVIFSNEDD 91
Query: 240 ASAALKEMNGKIINGWMIVVDVA 262
A A M+GK + G + ++ A
Sbjct: 92 AKCAKDAMDGKALLGRPLRINFA 114
>gi|452002034|gb|EMD94493.1| hypothetical protein COCHEDRAFT_1131167 [Cochliobolus
heterostrophus C5]
Length = 125
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T ++TLR+ FE FG + E ++ D+ + RS+G+ F+ Y E A AA++
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G I VD A
Sbjct: 63 MNNEEFDGRRIRVDKA 78
>gi|348686235|gb|EGZ26050.1| hypothetical protein PHYSODRAFT_285141 [Phytophthora sojae]
Length = 233
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 165 NLQNSMVPSDSSEASP--TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKI 222
+Q D + P TQ K LFV +S+ T+E+ LR FE +G + V+++ D
Sbjct: 7 QMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPE 66
Query: 223 SKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
K S+GY F+EY EE AA K +GK I+G +VVDV +
Sbjct: 67 GK-SRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVER 106
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNGK ++G I VD A + +
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSE 87
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNGK ++G I VD A + +
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSE 87
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNGK ++G I VD A + +
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSE 87
>gi|325972712|ref|YP_004248903.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027950|gb|ADY14709.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 92
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
KK++V LS+ TSE+ LR F +G +V II+D+ ++R KG+ F+E + AA AA+
Sbjct: 2 AKKIYVGNLSYNTSEEELRDLFAQYGTVVSANIIIDRETRRPKGFGFVEMQEDAAADAAI 61
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSRGRPR 274
+++GK I G + V+ A P+ + G R
Sbjct: 62 SQLDGKEIGGRNLRVNEAIAKPRPTHGSYR 91
>gi|68036648|gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L + TSE+ ++ FE +G + V+++ DK++ + +GYAF+EY +A K
Sbjct: 138 KTLFVARLGYETSEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYAHTRDMKSAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ ++ ++VDV +T P + RPR
Sbjct: 198 QADGRKVDNKRVLVDVERGRTVPNW---RPR 225
>gi|110638796|ref|YP_679005.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281477|gb|ABG59663.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 143
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L F E LR FE +GE+ VKII DK + RSKG+ F+E + AA A+ E+
Sbjct: 3 IFVGSLPFSLEENELREFFEEYGEVSSVKIISDKFTGRSKGFGFVEMPDDAAAQKAIDEL 62
Query: 248 NGKIINGWMIVVDVA---KTTPKYS 269
NG +NG IVV+ + K P+ S
Sbjct: 63 NGAEVNGRTIVVNKSEEKKDGPRRS 87
>gi|19881711|gb|AAM01112.1|AC098682_16 Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 119
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 51/68 (75%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLF+ G+S+ T +++L+ AF +GE++E ++I+D+ + RS+G+ F+ YT+ + A+A
Sbjct: 28 MSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAA 87
Query: 243 ALKEMNGK 250
A+ M+GK
Sbjct: 88 AITGMDGK 95
>gi|332226186|ref|XP_003262269.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Nomascus
leucogenys]
Length = 1033
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ +KLF+ GLS T EK L+A F +G ++EV ++ D+ + +S+G+AFI + + A+AA
Sbjct: 6 RPEKLFIGGLSLKTDEKALKAEFGKYGRIIEVFLMKDRETNKSRGFAFIIFESPADANAA 65
Query: 244 LKEMNGKIINGWMIVVDVA-KTTPKYSRGRP 273
++MNGK ++G I V +A K K SR P
Sbjct: 66 ARDMNGKYLDGKAIKVALAIKPAFKSSRWVP 96
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ TLR F FG + E ++ D+ + RS+G+ F+ ++++ A AAL
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G +I VD A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL+V GL++ + +LR AFE FG++++ K++ + + RSKG+ F+ + E+ A AL+
Sbjct: 21 KLYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVTFKREDEAKEALES 80
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRP 273
M+GK G I VD AKT + + P
Sbjct: 81 MDGKDFAGRSIRVDYAKTQKEMQQNPP 107
>gi|261859212|dbj|BAI46128.1| RNA binding motif protein, X-linked-like 2 [synthetic construct]
Length = 392
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
+++MNGK ++G I V A T P +
Sbjct: 66 VRDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2; Short=xCIRP2;
AltName: Full=Glycine-rich RNA-binding protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+F T+E++L F +G++ EV ++ D+ +KRS+G+ F+ + + A A+
Sbjct: 6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKAVDGRQIRVDQA 81
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNGK ++G I VD A + +
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSE 87
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|449486950|ref|XP_004157451.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 163
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ K+FV GLS+ + + TLR AF +GE+VE +++MD + R KG+ F+ ++ +E AS+
Sbjct: 67 VSGSKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASS 126
Query: 243 ALKEMNGKIINGWMI 257
A+K ++GK + G I
Sbjct: 127 AIKALDGKDLGGRRI 141
>gi|158286893|ref|XP_565448.3| AGAP006755-PA [Anopheles gambiae str. PEST]
gi|157020685|gb|EAL41962.3| AGAP006755-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
T+ K LFV +++ TSE LR FE +G + ++ +I DK + + +GYAFIEY E
Sbjct: 97 TEDPFKTLFVARINYDTSESKLRREFEIYGNIKKIIMINDKDTGKPRGYAFIEYEHERDM 156
Query: 241 SAALKEMNGKIINGWMIVVDVAKT 264
AA K +GK I+G ++VDV +
Sbjct: 157 HAAYKHADGKKIDGKRVLVDVERA 180
>gi|374812290|ref|ZP_09716027.1| RNP-1 like RNA-binding protein [Treponema primitia ZAS-1]
Length = 99
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
KKL+V LS+ T+E LR F FG + KII D+ + SKG+ FIE T+E ASAA+
Sbjct: 3 KKLYVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAAIA 62
Query: 246 EMNGKIINGWMIVVDVAKTTPKYSR 270
NG+ +G + V+ A P+ R
Sbjct: 63 GTNGREFDGRQLRVNEAMDKPRRDR 87
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 53/78 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T++ L AF FG++++ K+I D+ + RS+G+ FI + E A + A+KE
Sbjct: 3 RCFVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAIKE 62
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 63 MNGKELDGRNITVNQAQS 80
>gi|384099683|ref|ZP_10000766.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
gi|383832219|gb|EID71694.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
Length = 92
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV LSF TSE+ L F FGE+ VK+I+D S RS+G+AF+E E A A++ +
Sbjct: 3 IFVGNLSFQTSEEQLLDVFTPFGEVSSVKVIVDGYSNRSRGFAFVEMPVSEHALTAIERL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSRGR 272
N +++ +IVV+ AK PK S R
Sbjct: 63 NESMLDSRVIVVNEAK--PKRSNDR 85
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+++T+++TLR FE +G + E ++ D+ + RS+G+ F+ + ++ A A+
Sbjct: 3 KLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMNA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G +I VD A
Sbjct: 63 MNNQEFDGRVIRVDKA 78
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 54/78 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L+ AF +GE+VE KII D+ + RS+G+ F+ + E++ A+
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDA 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK+++G I V+ A++
Sbjct: 69 MNGKMLDGRSITVNPAQS 86
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 14 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 74 MNGKSVDGRQIRVDQA 89
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+++T+++TLR FE +G + E ++ D+ + RS+G+ F+ + ++ A A+
Sbjct: 3 KLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMNA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G +I VD A
Sbjct: 63 MNNQEFDGRVIRVDKA 78
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNGK ++G I VD A + +
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSE 87
>gi|3510252|gb|AAC33496.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 304
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
T K K+FV GL++ T T+R FE FGE+VE +I DK + RSKGY F+ + EAA
Sbjct: 17 TDTKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAA 76
Query: 241 SAALKEMNGKIINGWMIVVDVA---------KTTPKYSRGRPR 274
A + MN +I+G ++A T+P++ GR R
Sbjct: 77 MRACQNMN-PVIDGRRANCNLACLGAQKPRPPTSPRHGTGRFR 118
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+++V L+F SE+ ++ AF FG + V + D +++RSKG+AF+EY +AA+AALK
Sbjct: 252 RIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKH 311
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG ++ G + V T
Sbjct: 312 MNGFMLAGRQLKVGRPHT 329
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ +++V + + + ++ FE FG + ++ + + + KGY F+EY ++A A+
Sbjct: 410 SNRIYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAI 469
Query: 245 KEMNGKIINGWMIVVDVA 262
++MNG + G I V A
Sbjct: 470 QQMNGWDLGGRPIKVGRA 487
>gi|150024447|ref|YP_001295273.1| RNA-binding protein RbpA [Flavobacterium psychrophilum JIP02/86]
gi|149770988|emb|CAL42455.1| Putative RNA-binding protein RbpA [Flavobacterium psychrophilum
JIP02/86]
Length = 133
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L + E LR +FE +G + VKII DK + RSKG+ F+E +E A+ E+
Sbjct: 3 IFVGSLPWSIEEADLRESFEAYGAVESVKIITDKFTGRSKGFGFVEMPNDEEGQKAIDEL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSR 270
NG ++G IVV+ ++ P+ R
Sbjct: 63 NGATVDGRAIVVNKSEPKPEGER 85
>gi|332211654|ref|XP_003254929.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Nomascus
leucogenys]
Length = 393
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|195117134|ref|XP_002003104.1| GI24161 [Drosophila mojavensis]
gi|193913679|gb|EDW12546.1| GI24161 [Drosophila mojavensis]
Length = 452
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LFV +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFVARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++FV+ LSFYT+E+ + F FG + E +++ D + R KG+ F++Y+++ A A+K
Sbjct: 22 EIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAVKA 81
Query: 247 MNGKIINGWMIVVDVAK 263
M+GKI+ G +I V++AK
Sbjct: 82 MDGKILRGRLIFVEMAK 98
>gi|357122080|ref|XP_003562744.1| PREDICTED: uncharacterized protein LOC100841917 [Brachypodium
distachyon]
Length = 324
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + KLFV GLS+ T + TL+ AF +G++ E ++I+D+ + RSKG+ FI YT+ EAA+A
Sbjct: 29 MSSSKLFVGGLSYATDDPTLKDAFSHYGDVCEARVIIDRDTGRSKGFGFITYTSSEAAAA 88
Query: 243 ALKEMNGKIINGWMIVVDVA 262
A+ M+GK + G M+ V A
Sbjct: 89 AISAMDGKDLQGRMVKVAYA 108
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ TLR F FG + E ++ D+ + RS+G+ F+ ++++ A AAL
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G +I VD A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|402860841|ref|XP_003894827.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
Length = 391
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDQKINKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|406988412|gb|EKE08420.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 123
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ +KL+V L+F SE +R F +GE+ EVKIIMD+ S RS+G+AF+ T + A A
Sbjct: 4 QNQKLYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRFSGRSRGFAFVRMATADEAGKA 63
Query: 244 LKEMNGKIINGWMIVVDVAKT 264
++G+ G +V+D A++
Sbjct: 64 KDALSGQPFQGKSLVIDWARS 84
>gi|395743087|ref|XP_003780683.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked-like-2 [Pongo abelii]
Length = 392
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGHIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|8927581|gb|AAF82129.1|AF279289_1 testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 386
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA+++
Sbjct: 3 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRD 62
Query: 247 MNGKIINGWMIVVDVAKTTPKY 268
MNGK ++G I V A T P +
Sbjct: 63 MNGKSLDGKAIKVAQA-TKPAF 83
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V LSF +E+ LR AFE +GE+ V IIMD+ + RS+G+AF+E E A A++ +
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 248 NGKIINGWMIVVDVAK 263
NG I+G + V+ A+
Sbjct: 117 NGHEIDGRSVTVNEAR 132
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V LSF +E+ LR AFE +GE+ V IIMD+ + RS+G+AF+E E A A++ +
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 248 NGKIINGWMIVVDVAK 263
NG I+G + V+ A+
Sbjct: 117 NGHEIDGRSVTVNEAR 132
>gi|389632187|ref|XP_003713746.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
gi|351646079|gb|EHA53939.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
Length = 236
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T E TLR FE +G + E ++ D+ + RS+G+ F+ YT E+ A A+
Sbjct: 58 KLFIGGLAWHTEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKAITA 117
Query: 247 MNGKIINGWMIVVDVAKTT 265
MN +G I VD A T
Sbjct: 118 MNNVEFDGRTIRVDKASDT 136
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V LSF +E+ LR AFE +GE+ V IIMD+ + RS+G+AF+E E A A++ +
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 248 NGKIINGWMIVVDVAK 263
NG I+G + V+ A+
Sbjct: 117 NGHEIDGRSVTVNEAR 132
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 54/78 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TEE ++
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|240254664|ref|NP_182201.4| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|63003880|gb|AAY25469.1| At2g46780 [Arabidopsis thaliana]
gi|330255657|gb|AEC10751.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 336
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
T K K+FV GL++ T T+R FE FGE+VE +I DK + RSKGY F+ + EAA
Sbjct: 17 TDTKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAA 76
Query: 241 SAALKEMNGKIINGWMIVVDVA---------KTTPKYSRGRPR 274
A + MN +I+G ++A T+P++ GR R
Sbjct: 77 MRACQNMN-PVIDGRRANCNLACLGAQKPRPPTSPRHGTGRFR 118
>gi|345569077|gb|EGX51946.1| hypothetical protein AOL_s00043g680 [Arthrobotrys oligospora ATCC
24927]
Length = 150
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+++T ++TLR FE FG++ E ++ D+ + RS+G+ F+ +T E A+ A+
Sbjct: 3 KLFVGGLAWHTDDQTLRTKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTNEADATTAMNA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN +G I VD A
Sbjct: 63 MNNTEFDGRYIRVDKA 78
>gi|226533056|ref|NP_001152375.1| DAG protein [Zea mays]
gi|195655685|gb|ACG47310.1| DAG protein [Zea mays]
Length = 244
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HWL+ M+ P ++ +MV Y + L VLG+E++A+ IY V + GF + +E
Sbjct: 87 EHWLIVMEFPTDPKPSEEEMVAAYVKTLAAVLGSEEEAKKKIYSVCTSTYTGFGALISEE 146
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+ ++ G+PGVL V PD NKDYGG+
Sbjct: 147 LSYKVKGLPGVLWVLPDSYLDVPNKDYGGD 176
>gi|169864290|ref|XP_001838756.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
gi|116500176|gb|EAU83071.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
Length = 380
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
+ S P+D EA KT LF+ L +E LR FEG+G + V+I+ DK + RS
Sbjct: 102 KESYKPADDPEAIGDPYKT--LFIARLHKSATETDLRREFEGYGTIERVRIVRDK-NGRS 158
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
+GYAFI Y E AA KE +G I G I+VDV +
Sbjct: 159 RGYAFIVYERERDMKAAYKESDGLHIMGKRILVDVER 195
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLFV GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK ++G I V+ A
Sbjct: 66 ARDMNGKSLDGKSIKVEQA 84
>gi|406985531|gb|EKE06283.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 83
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
KKLF+ LS+ + LRA F FG +++ +IMD+++ RS+G+ F+E TEE A+ AL
Sbjct: 2 KKLFIGNLSWEVTSDDLRAFFASFGTVIDAVVIMDRMTGRSRGFGFVEMETEEQANKAL- 60
Query: 246 EMNGKIINGWMIVVDVAKTTPKYSR 270
E NGK + G + V++AK P+ +R
Sbjct: 61 EGNGKDLKGRAMNVNMAK--PQENR 83
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++ E+A +A++
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXEDAMRSAIEG 77
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ LS+ T++++L+ AF FG L E K+++DK S RS+G+ F+ + ++A A++
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGLDLDGRNITVDKAQ 84
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV +I D+ ++RS+G+ F+ + + A A+
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDAMLA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKSLDGRQIRVDQA 81
>gi|402894334|ref|XP_003910320.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Papio
anubis]
Length = 394
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
MNGK ++G I VD A + +
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSE 87
>gi|297833456|ref|XP_002884610.1| hypothetical protein ARALYDRAFT_477997 [Arabidopsis lyrata subsp.
lyrata]
gi|297330450|gb|EFH60869.1| hypothetical protein ARALYDRAFT_477997 [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMD----KPGVGVVTKAQMVDRYAQILT 103
YS L+ N N T+L +HWL+ M+ KP T+ +M++ Y + LT
Sbjct: 64 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKP-----TEEEMINSYVKTLT 118
Query: 104 KVLGNEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGG 163
VLG+E++A+ IY VS + GF + +E + ++ +PGVL V PD NKDYGG
Sbjct: 119 SVLGSEEEAKKKIYSVSTSTYTGFGALISEELSCKVKELPGVLWVLPDSYLDVPNKDYGG 178
Query: 164 N 164
+
Sbjct: 179 D 179
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 131 IYSVSTSTYTGFGALISEELSCKVKELPGVLWVLPDSYLDVPNKDY 176
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV +I D+ ++RS+G+ F+ + + A A+
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDAMLA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKSLDGRQIRVDQA 81
>gi|219880797|gb|ACL51672.1| truncated RNA binding motif protein Y-linked [Macaca mulatta]
Length = 231
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ +++S+G+AF+ + E A A K+
Sbjct: 9 KLFIGGLTRKTNEKMLKAVFVKHGPISEVLLIKDR-TRKSRGFAFVTFENPEDAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSGGRQR 95
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV L++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++TE+A +A++
Sbjct: 9 RCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|350534520|ref|NP_001233578.1| RNA-binding motif protein, X-linked-like-2 [Pan troglodytes]
gi|343958222|dbj|BAK62966.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
gi|343961837|dbj|BAK62506.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
Length = 392
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+++ L++ +E LR AFE FGE+ V+II DK+S +S+G AF+E ++ +AA+ +
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAIDGL 62
Query: 248 NGKIINGWMIVVDVA---KTTPKYSRGR 272
NG I G I V+ A K P+ SR R
Sbjct: 63 NGTQIRGREIKVNEALPKKPFPEKSRSR 90
>gi|302769522|ref|XP_002968180.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
gi|300163824|gb|EFJ30434.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
Length = 296
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
Q S V D E + +KLFV GL++ T+ + LR AFE FGE+ E +I+DK + +S
Sbjct: 14 QYSAVADDIREVASKDPAHRKLFVRGLAWETTSQDLREAFEQFGEIEEGAVIIDKATGKS 73
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVA 262
+G+ FI + ++A ALKE + K I+G + V ++A
Sbjct: 74 RGFGFITFKHMDSAQRALKEPS-KTIDGRITVCNLA 108
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KL++ GLS+ TS +TL F +GE+ E + DK + +S+G+AF+ Y T EAA A+
Sbjct: 124 RKLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAID 183
Query: 246 EMNGKIINGWMIVVDVA 262
+ N K I G ++V +A
Sbjct: 184 DPN-KTIEGRHVIVKLA 199
>gi|426367314|ref|XP_004050678.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Gorilla
gorilla gorilla]
Length = 392
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|218193515|gb|EEC75942.1| hypothetical protein OsI_13038 [Oryza sativa Indica Group]
Length = 261
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 55/77 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++FV GLSF+T E+ L AF FG++V+ +I++++ ++R +G+ F+ ++ EA +A+KE
Sbjct: 8 RIFVGGLSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTFSDPEAVDSAIKE 67
Query: 247 MNGKIINGWMIVVDVAK 263
M+ + ++G I V+ A+
Sbjct: 68 MHCQELDGRTISVNKAE 84
>gi|426199137|gb|EKV49062.1| hypothetical protein AGABI2DRAFT_149358 [Agaricus bisporus var.
bisporus H97]
Length = 406
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
P+D +EA KT LF++ L +E LR FEG+G + V+I+ DK RS+GYAF
Sbjct: 104 PADDAEAVGDPYKT--LFISRLHKSATETDLRREFEGYGTIERVRIVRDK-KNRSRGYAF 160
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
I Y E AA KE +G I G I+VDV +
Sbjct: 161 IVYERERDMKAAYKESDGLHIMGKKILVDVER 192
>gi|409077798|gb|EKM78163.1| hypothetical protein AGABI1DRAFT_101420 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 406
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
P+D +EA KT LF++ L +E LR FEG+G + V+I+ DK RS+GYAF
Sbjct: 104 PADDAEAVGDPYKT--LFISRLHKSATETDLRREFEGYGTIERVRIVRDK-KNRSRGYAF 160
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
I Y E AA KE +G I G I+VDV +
Sbjct: 161 IVYERERDMKAAYKESDGLHIMGKKILVDVER 192
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ F+ LS+ T++++L+ AF FG L E K+++DK S RS+G+ F+ + ++A A++
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNG ++G I VD A+
Sbjct: 68 MNGLDLDGRNITVDKAQ 84
>gi|440789937|gb|ELR11228.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 506
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ +KLF+ GLS+ T+ +TLRAAFE +G++ E K+I + + RS+G+ + Y E A A
Sbjct: 5 VNDRKLFIGGLSWSTTSETLRAAFEKYGKVEEAKVISEPGTGRSRGFGAVMYYNESDALA 64
Query: 243 ALKEMNGKIINGWMIVVD 260
A K M+G + G + VD
Sbjct: 65 AYKGMHGVELEGRFLYVD 82
>gi|333993552|ref|YP_004526165.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
gi|333734416|gb|AEF80365.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
Length = 100
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
KKL+V LS+ T+E LR F FG + KII D+ S SKG+ FIE +T+E A+AA+
Sbjct: 3 KKLYVGNLSYQTTEDGLRNLFSQFGNVTSSKIIFDRESGSSKGFGFIEMSTDEEAAAAIT 62
Query: 246 EMNGKIINGWMIVVDVAKTTPKYSR 270
NG G + V+ A P+ R
Sbjct: 63 GTNGHEFEGRQLRVNEAMDKPRRDR 87
>gi|75076898|sp|Q4R813.1|HNRGT_MACFA RecName: Full=RNA-binding motif protein, X-linked-like-2; AltName:
Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
gi|67968804|dbj|BAE00759.1| unnamed protein product [Macaca fascicularis]
Length = 394
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+L+V L F SE LR FE +G++ E+ +I+DK++ +S+G+AF+ + +AA +A+
Sbjct: 48 RLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQSAINN 107
Query: 247 MNGKIINGWMIVVDVAKTTPKYSR 270
+NG ++G IVV+ AK P+ R
Sbjct: 108 LNGSSVSGRQIVVNEAK--PREER 129
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V LSF +E+ LR AFE +GE+ V IIMD+ + RS+G+AF+E E A A++ +
Sbjct: 68 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 127
Query: 248 NGKIINGWMIVVDVAK 263
NG I+G + V+ A+
Sbjct: 128 NGHEIDGRSVTVNEAR 143
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KLFV GLS+ T + +LR+AFE GE+V+ K+I D+ + +S+G+ F+ + + + A AA
Sbjct: 2 SAKLFVGGLSWGTDDNSLRSAFEQHGEVVDAKVIQDRDTGKSRGFGFVTFASADEAEAAK 61
Query: 245 KEMNGKIINGWMIVVDVA 262
+N ++G I VD A
Sbjct: 62 NALNQTELDGREIRVDSA 79
>gi|195050851|ref|XP_001992981.1| GH13577 [Drosophila grimshawi]
gi|193900040|gb|EDV98906.1| GH13577 [Drosophila grimshawi]
Length = 465
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQDSGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|158257974|dbj|BAF84960.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|153252068|ref|NP_055284.3| RNA-binding motif protein, X-linked-like-2 [Homo sapiens]
gi|229462965|sp|O75526.3|HNRGT_HUMAN RecName: Full=RNA-binding motif protein, X-linked-like-2; AltName:
Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
Length = 392
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 170 MVPSDSSEASPTQIK-----TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISK 224
M S ASP+Q+ T K+FV GL+F T+E L AF +G++++ I++++
Sbjct: 48 MSLSKLQHASPSQLPFLRTMTSKIFVKGLAFSTTEDKLAEAFSQYGKVLKADIVLNRAKT 107
Query: 225 RSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDV 261
RSKG+ ++ + EE A A MN KI++G ++ VD+
Sbjct: 108 RSKGFGYVTFAKEEDAQKAQIGMNRKILHGRVLYVDM 144
>gi|302788860|ref|XP_002976199.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
gi|300156475|gb|EFJ23104.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
Length = 343
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
Q S V D E + +KLFV GL++ T+ + LR AFE FGE+ E +I+DK + +S
Sbjct: 61 QYSAVADDIREVASKDPAHRKLFVRGLAWETTSQDLRDAFEQFGEIEEGAVIIDKATGKS 120
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVA 262
+G+ FI + ++A ALKE + K I+G + V ++A
Sbjct: 121 RGFGFITFKHMDSAQRALKEPS-KTIDGRITVCNLA 155
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KL++ GLS+ TS +TL F +GE+ E + DK + +S+G+AF+ Y T EAA A+
Sbjct: 171 RKLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAID 230
Query: 246 EMNGKIINGWMIVVDVA 262
+ N K I G ++V +A
Sbjct: 231 DPN-KTIEGRHVIVKLA 246
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF +GE+++ KII D+ + RS+G+ F+ +++E++ A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|8576316|gb|AAC24858.2| testes specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
gi|119589071|gb|EAW68665.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 392
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|387914322|gb|AFK10770.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392876160|gb|AFM86912.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 133
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T E++L F +G++ EV++I D+ ++ S+G+ FI + A AL
Sbjct: 6 KLFVGGLSFSTDEQSLEEVFSEYGQISEVRVIKDRDTQLSRGFGFITFENPGDAKDALLA 65
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK I+G I VD A+
Sbjct: 66 MNGKSIDGRQIRVDQAE 82
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
+EMNGK ++G I V+ A T P++
Sbjct: 66 AREMNGKSLDGKPIKVEQA-TKPQF 89
>gi|255584774|ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
gi|223527096|gb|EEF29277.1| cold-inducible RNA binding protein, putative [Ricinus communis]
Length = 94
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 52/78 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+LFV LS YT+ + L F FG + E ++++D +++ KG+ F+ + +E A ALK
Sbjct: 8 QLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQKALKA 67
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG+I++G ++ V+VAK+
Sbjct: 68 MNGRIVDGRLLFVEVAKS 85
>gi|195387576|ref|XP_002052470.1| GJ21434 [Drosophila virilis]
gi|194148927|gb|EDW64625.1| GJ21434 [Drosophila virilis]
Length = 454
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQDSGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|333381249|ref|ZP_08472931.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830219|gb|EGK02847.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
Length = 107
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+F+ GLS+ ++ L+ F +GE+ K+IMDK + RSKGY F+E A A++E+
Sbjct: 3 IFIAGLSYSINDNDLKDLFSEYGEITSAKVIMDKATGRSKGYGFVELADNAAGQKAIEEL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSRGRPR 274
NG +G I V A+ P+ RPR
Sbjct: 63 NGAEYDGRTISVSEAR--PRTEGDRPR 87
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L++ T+E ++ FE +G + V++I DK + + +GYAFIEY AA K
Sbjct: 138 KTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDMKAAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ ++ ++VDV +T P + RPR
Sbjct: 198 QADGRKLDNRRVLVDVERGRTVPNW---RPR 225
>gi|168061382|ref|XP_001782668.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665828|gb|EDQ52499.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 53/76 (69%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T ++V GLS+ ++E+TL+ +F FGE+V VKI+ D+ S S+G+ F+ ++ AA+ A+
Sbjct: 4 TNSVYVGGLSYGSTEETLKRSFMQFGEVVSVKIVHDRDSGESRGFGFVTFSNPRAATVAI 63
Query: 245 KEMNGKIINGWMIVVD 260
++M+G+ I G I V+
Sbjct: 64 QDMDGRQIEGRTIRVN 79
>gi|17137278|ref|NP_477205.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|442626488|ref|NP_001260172.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|442626490|ref|NP_001260173.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
gi|13638469|sp|P17133.2|RU17_DROME RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|7297205|gb|AAF52471.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|16769660|gb|AAL29049.1| LD46049p [Drosophila melanogaster]
gi|19528491|gb|AAL90360.1| RE35772p [Drosophila melanogaster]
gi|220946876|gb|ACL85981.1| snRNP70K-PA [synthetic construct]
gi|220956416|gb|ACL90751.1| snRNP70K-PA [synthetic construct]
gi|440213473|gb|AGB92708.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|440213474|gb|AGB92709.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
Length = 448
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|158315|gb|AAA28859.1| U1 70K small nuclear ribonucleoprotein, (first expressed exon)
[Drosophila melanogaster]
Length = 448
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|449516421|ref|XP_004165245.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
[Cucumis sativus]
Length = 277
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ ++ P ++ +MV+ Y + L V+G
Sbjct: 70 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNTYVKTLAAVVG 129
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E++A+ IY VS + GF + +E + ++ +PGVL V PD NKDYGG+
Sbjct: 130 SEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 186
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 138 IYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDY 183
>gi|47229936|emb|CAG10350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G L +V I+ D+ S+RS+G+AF+ + E + A +
Sbjct: 82 LGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEHA 141
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 142 NGMELDGRRIRVDYSITKRAHTPTPGIYMGRP 173
>gi|413919528|gb|AFW59460.1| DAG protein [Zea mays]
Length = 246
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HWL+ M+ P ++ +MV Y + L VLG+E++A+ IY V + GF + +E
Sbjct: 87 EHWLIVMEFPTDPKPSEEEMVAAYVKTLAAVLGSEEEAKKKIYSVCTSTYTGFGALISEE 146
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+ ++ G+PGVL V PD NKDYGG+
Sbjct: 147 LSYKVKGLPGVLWVLPDSYLDVPNKDYGGD 176
>gi|195651471|gb|ACG45203.1| DAG protein [Zea mays]
Length = 246
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HWL+ M+ P ++ +MV Y + L VLG+E++A+ IY V + GF + +E
Sbjct: 87 EHWLIVMEFPTDPKPSEEEMVAAYVKTLAAVLGSEEEAKKKIYSVCTSTYTGFGALISEE 146
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+ ++ G+PGVL V PD NKDYGG+
Sbjct: 147 LSYKVKGLPGVLWVLPDSYLDVPNKDYGGD 176
>gi|195338817|ref|XP_002036020.1| GM13669 [Drosophila sechellia]
gi|194129900|gb|EDW51943.1| GM13669 [Drosophila sechellia]
Length = 448
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 56/88 (63%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+K + V LS+ + L+ FE GE+V V++ +D+ S RS+G+ FI+++T +A + AL
Sbjct: 287 SKTIIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKAL 346
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSRGR 272
+ M GK ++G I VD ++ P+ ++ R
Sbjct: 347 ETMQGKEVDGRAIAVDKTESNPRNTQAR 374
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 163 GNNLQNSMVPSDSSEASP--TQIKTKK-----------LFVTGLSFYTSEKTLRAAFEGF 209
G + + D +E++P TQ + K +FV ++F E L F +
Sbjct: 351 GKEVDGRAIAVDKTESNPRNTQARAAKFGDTPSEPSQTIFVGNVAFSADEDALWQTFADY 410
Query: 210 GELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE-MNGKIINGWMIVVD 260
G + V++ D+ + + KG+A++E+ + A+AA + G I G + +D
Sbjct: 411 GAVRSVRLPTDRETGQPKGFAYVEFEDQAGATAAFEAGKEGLEIGGRPVRLD 462
>gi|194862752|ref|XP_001970105.1| GG23559 [Drosophila erecta]
gi|190661972|gb|EDV59164.1| GG23559 [Drosophila erecta]
Length = 448
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
+EMNGK ++G I V+ A T P++
Sbjct: 66 AREMNGKSLDGKPIKVEQA-TKPQF 89
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T ++L AAF +GE++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
M+GK ++G I V+ A++
Sbjct: 69 MSGKELDGRNITVNEAQS 86
>gi|312088239|ref|XP_003145783.1| hypothetical protein LOAG_10208 [Loa loa]
Length = 353
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE FG++ + ++ DK K +GYAFIEY +E+ S A K
Sbjct: 144 KTLFVARINYETSESKLRREFEQFGKITRLALVHDKNGK-PRGYAFIEYQHKESMSEAYK 202
Query: 246 EMNGKIINGWMIVVDVAKTTPKYSRGR 272
+ +G I+G +VVD Y RGR
Sbjct: 203 KADGMKIDGRRVVVD-------YERGR 222
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
+EMNGK ++G I V+ A T P++
Sbjct: 66 AREMNGKSLDGKPIKVEQA-TKPQF 89
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
+EMNGK ++G I V+ A T P++
Sbjct: 66 AREMNGKSLDGKPIKVEQA-TKPQF 89
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AFI + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + + +IMD+ + R +G+ F++Y E A A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEG 65
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VE+ ++ D+ + +S+G+AF+ + + A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDV 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRGR 272
++MNGK ++G I V+ A T P + GR
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSFESGR 93
>gi|195436995|ref|XP_002066430.1| GK18098 [Drosophila willistoni]
gi|194162515|gb|EDW77416.1| GK18098 [Drosophila willistoni]
Length = 470
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKMATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GLS+ T +++L AF FGE+ + KII D+ + RS+G+ F+ + E++ A+ E
Sbjct: 7 RCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMRDAIDE 66
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK ++G I V+ A+
Sbjct: 67 MNGKELDGRSITVNEAQ 83
>gi|195471605|ref|XP_002088093.1| GE18384 [Drosophila yakuba]
gi|194174194|gb|EDW87805.1| GE18384 [Drosophila yakuba]
Length = 448
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|126663185|ref|ZP_01734183.1| RNA binding protein [Flavobacteria bacterium BAL38]
gi|126624843|gb|EAZ95533.1| RNA binding protein [Flavobacteria bacterium BAL38]
Length = 111
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L F E LR FE +G + VKII DK + RSKG+ F+E + A A+ E+
Sbjct: 3 IFVGSLPFSVEEADLRGYFEEYGAVESVKIISDKFTGRSKGFGFVEMANDAEAQKAIDEL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSR 270
NG I G IVV+ ++ P+ R
Sbjct: 63 NGGTIEGRKIVVNKSEPKPEGER 85
>gi|41469316|gb|AAS07172.1| putative chloroplast differentiation and palisade
development-related protein [Oryza sativa Japonica
Group]
Length = 180
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ M+ P ++ MV Y + L V+G
Sbjct: 59 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPTDPKPSEEDMVAAYVKTLAAVVG 118
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNL 166
+E++A+ IY V + GF + +E + ++ G+PGVL V PD NKDYGG ++
Sbjct: 119 SEEEAKKKIYSVCTTTYTGFGALISEELSYKVKGLPGVLWVLPDSYLDVPNKDYGGYSI 177
>gi|71000080|ref|XP_754757.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
gi|66852394|gb|EAL92719.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
Af293]
gi|159127765|gb|EDP52880.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
A1163]
Length = 118
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ LR FE +G + E ++ D+ + RS+G+ F+ ++++ A AA+
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMDA 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MN + +G I VD A P + G
Sbjct: 63 MNNQEFDGRTIRVDKASERPARNNG 87
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 54/80 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL+V LS+ T+++TLR F FGE+ + I+ D+ + R++G+ F+ ++TEE A+AA+
Sbjct: 3 KLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDA 62
Query: 247 MNGKIINGWMIVVDVAKTTP 266
+N + ++G I V+VA P
Sbjct: 63 LNEQELDGRRIRVNVANARP 82
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 56/78 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF +GE+++ KII D+ + RS+G+ F+ +++E++ A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|78356222|ref|YP_387671.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218627|gb|ABB37976.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 114
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V LS+ SE LR AFE FG + +V+II D + RSKG+ F+E + A+AA++ +
Sbjct: 3 IYVGNLSYQMSEDDLRGAFEEFGAVDKVRIITDHDTGRSKGFGFVEMAEDSEANAAIEAL 62
Query: 248 NGKIINGWMIVVDVAKTTPK 267
NG+ + G I V+ A+ P+
Sbjct: 63 NGREMGGRSITVNEARPRPE 82
>gi|332870649|ref|XP_003319029.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 1 [Pan troglodytes]
Length = 506
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|357444503|ref|XP_003592529.1| DAG protein [Medicago truncatula]
gi|355481577|gb|AES62780.1| DAG protein [Medicago truncatula]
Length = 170
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVS-WQSNFGFCCELDD 133
KHW++ MD PG + + +D Y Q L VLG+ +A+ IY V ++ FGF CE+D+
Sbjct: 76 KHWVIAMDNPGGKDSSWQEKIDCYIQTLGHVLGSVVEAKKKIYSVYCFKKEFGFGCEIDE 135
Query: 134 ECAQELTGVPGVLSVQPDENFGSENKDYGGNNL 166
+ L +PGV+ + PD + K YGG +
Sbjct: 136 QTKNNLGVMPGVMFILPDVYMDIQKKYYGGEDF 168
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 3 IYDASC-DTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY C FGF C +DE+T L +PGV+ + PD Y ++K Y
Sbjct: 117 IYSVYCFKKEFGFGCEIDEQTKNNLGVMPGVMFILPDV-YMDIQKKY 162
>gi|194760326|ref|XP_001962392.1| GF14460 [Drosophila ananassae]
gi|190616089|gb|EDV31613.1| GF14460 [Drosophila ananassae]
Length = 453
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLS+ T + +LR FE FG + + ++ D+ + RS+G+ F+ ++T+E A+AA+
Sbjct: 3 KLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMNA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G I VD A
Sbjct: 63 MNNQEFDGRQIRVDKA 78
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KLFV GL+F T E++L F +G++ EV+II D+ + S+G+ F+ + + + A AL
Sbjct: 5 RKLFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALT 64
Query: 246 EMNGKIINGWMIVVDVAK 263
MNG+ + G I VD A+
Sbjct: 65 SMNGRSLEGRQIRVDRAE 82
>gi|355566744|gb|EHH23123.1| Testis-specific heterogeneous nuclear ribonucleoprotein G-T [Macaca
mulatta]
Length = 280
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + + +IMD+ + R +G+ F++Y E A A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEG 65
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|332870664|ref|XP_003319035.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes]
Length = 460
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|242041407|ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
gi|241921952|gb|EER95096.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
Length = 484
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L++ TSE+ ++ FEG+G + V+++ +K + + +GYAFIEY A K
Sbjct: 138 KTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ ++ ++VDV +T P + RPR
Sbjct: 198 QADGRKVDNRRVLVDVERGRTVPNW---RPR 225
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ LR FE +G + E ++ D+ + RS+G+ F+ ++++ A AA+
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMDA 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MN + +G I VD A P + G
Sbjct: 63 MNNQEFDGRTIRVDKASERPARNNG 87
>gi|125984041|ref|XP_001355785.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
gi|54644102|gb|EAL32844.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
Length = 457
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 174 DSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
DS++ P + +KLF+ GL + T++++L+ FE +GE+V+V ++ D +KRS+G+ FI
Sbjct: 7 DSNDNKPEHEQYRKLFIGGLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFIT 66
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSRGRP 273
Y+ A + K+ VV+ + P+ GRP
Sbjct: 67 YSRAHMVDDAQNDRPHKVDG---RVVEPKRAVPRQDIGRP 103
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEY 234
KKLFV GL E+ LR F+ +G ++ I+ DK + + +G+ FIE+
Sbjct: 110 KKLFVGGLKDDVEEEDLRECFKSYGTILSCTIVTDKDTGKKRGFGFIEF 158
>gi|449435011|ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
[Cucumis sativus]
gi|449435013|ref|XP_004135290.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 2
[Cucumis sativus]
Length = 89
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+LF++ LS YT+ + L+ F FG + E ++I D ++R KG+ F+ + + A ALK
Sbjct: 8 ELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALKA 67
Query: 247 MNGKIINGWMIVVDVAKT 264
M+G+I++G +I V+ AKT
Sbjct: 68 MDGRIVDGRLIFVEFAKT 85
>gi|336383939|gb|EGO25088.1| U1 snRNP 70K protein [Serpula lacrymans var. lacrymans S7.9]
Length = 377
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
PSD EA KT LF++ L SE LR FE FG + V+I+ D RS+GYAF
Sbjct: 105 PSDDPEAIGDPYKT--LFISRLHKGASEMELRRDFESFGTIERVRIVRDS-KGRSRGYAF 161
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
I Y E AA KE +G ING I+VDV +
Sbjct: 162 IVYERERDMKAAYKESDGLHINGKRILVDVER 193
>gi|332870651|ref|XP_003319030.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 2 [Pan troglodytes]
Length = 460
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|332028166|gb|EGI68217.1| Peptidyl-prolyl cis-trans isomerase E [Acromyrmex echinatior]
Length = 293
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+ ++V GL+ EK L AAF FGE+V+V+I +D S++ +G+AFIE+ T E A+AA+
Sbjct: 7 RTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFETAEDAAAAID 66
Query: 246 EMNGKIINGWMIVVDVAK 263
MN + G I V++AK
Sbjct: 67 NMNDSELFGRTIRVNIAK 84
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + K+FV GLS+ T ++ L AF +GE+VE ++IMD+ + RS+G+ F+ + E AS+
Sbjct: 37 MSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASS 96
Query: 243 ALKEMNGKIINGWMI 257
A++ ++G+ ++G I
Sbjct: 97 AIQALDGQDLDGRRI 111
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 52/75 (69%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ + K+FV GLS+ T ++ L AF +GE+VE ++IMD+ + RS+G+ F+ + E AS+
Sbjct: 37 MSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASS 96
Query: 243 ALKEMNGKIINGWMI 257
A++ ++G+ ++G I
Sbjct: 97 AIQALDGQDLDGRRI 111
>gi|413934408|gb|AFW68959.1| U1 snRNP [Zea mays]
Length = 491
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L++ TSE+ ++ FEG+G + V+++ +K + + +GYAFIEY A K
Sbjct: 138 KTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTRDMKNAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ ++ ++VDV +T P + RPR
Sbjct: 198 QADGRKVDNRRVLVDVERGRTVPNW---RPR 225
>gi|332870655|ref|XP_003319032.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 2 [Pan troglodytes]
Length = 460
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|387913868|gb|AFK10543.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV G++F T E+TL F +G++ EV +I ++ ++RSKG F+ + + A AL
Sbjct: 6 KLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGLGFVTFENPDDARDALAG 65
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSR 270
MNGK ++G I VD A K++ SR
Sbjct: 66 MNGKTVDGRQIRVDHAGKSSGNRSR 90
>gi|148906727|gb|ABR16511.1| unknown [Picea sitchensis]
Length = 635
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LF+ G SF T+E+ L F FG + +V+I+ DK++ S+G+ F+ +E A AA++ +
Sbjct: 556 LFIAGFSFVTTERDLEKKFSRFGRVNDVRIVRDKLTGDSRGFGFLSLERDEDADAAIRAL 615
Query: 248 NGKIINGWMIVVDVAKTT 265
+ NG +++V+ +KT+
Sbjct: 616 DQTQWNGRIVLVEKSKTS 633
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + +V +I DK + RS+G+ F++Y E A AL
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDG 65
Query: 247 MNGKIINGWMIVV 259
MNGK ++ + VV
Sbjct: 66 MNGKSVDLMIFVV 78
>gi|332870653|ref|XP_003319031.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
Length = 497
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ KL+V L + ++ +LR F FG + K++ D+ S RSKG+ F+E +E A AA+
Sbjct: 2 SSKLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAI 61
Query: 245 KEMNGKIINGWMIVVDVAK 263
+NG+ ++G IVV+V++
Sbjct: 62 NGLNGQSVDGRQIVVNVSR 80
>gi|154279360|ref|XP_001540493.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412436|gb|EDN07823.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 149
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ TLRA FE +G + E ++ D+ + RS+G+ F+ + ++ A AA+
Sbjct: 3 KLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMNA 62
Query: 247 MNGKIINGWMIVVDVA 262
M+ + +G +I VD A
Sbjct: 63 MSNQEFDGRVIRVDKA 78
>gi|255566565|ref|XP_002524267.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
gi|223536458|gb|EEF38106.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
Length = 389
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 76 HWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDEC 135
HWLV M+KP G T+ +++D Y + L +V+G+E++A+M IY VS + + F + +E
Sbjct: 97 HWLVVMEKP-EGDPTRDEIIDSYIKTLAQVVGSEEEARMKIYSVSTRCYYAFGALVSEEL 155
Query: 136 AQELTGVPGVLSVQPDENFGSENKDYGG 163
+ ++ +P V V PD +NKDYGG
Sbjct: 156 SYKIKELPRVRWVLPDSYLDVKNKDYGG 183
>gi|114691683|ref|XP_001135255.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 4 [Pan troglodytes]
gi|332870660|ref|XP_003319033.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
Length = 497
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|50417136|gb|AAH77089.1| Snrnp70 protein [Danio rerio]
Length = 306
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
P + + A KT LFV +++ T+E LR FE +G + + I+ +K + R +GYAF
Sbjct: 91 PHNDANAQGDAFKT--LFVARINYDTTESKLRREFEVYGPIKRIYIVYNKKTGRPRGYAF 148
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
IEY E +A K +GK I+G ++VDV +
Sbjct: 149 IEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + + +IMD+ + R +G+ F++Y E A A+
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + + +IMD+ + R +G+ F++Y E A A+
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|347535511|ref|YP_004842936.1| putative RNA-binding protein RbpA [Flavobacterium branchiophilum
FL-15]
gi|345528669|emb|CCB68699.1| Putative RNA-binding protein RbpA [Flavobacterium branchiophilum
FL-15]
Length = 117
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L F E L+ +FE +G + VKII DK + RSKG+ F+E + A A+ E+
Sbjct: 3 IFVGSLPFSIEEADLKESFEAYGAVDSVKIITDKFTGRSKGFGFVEMPNDSEAQKAIDEL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSR 270
NG + G IVV+ ++ P+ R
Sbjct: 63 NGATVQGRAIVVNKSEPKPEGER 85
>gi|320586919|gb|EFW99582.1| glycine-rich RNA-binding protein [Grosmannia clavigera kw1407]
Length = 462
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T E TLR FE FG + E ++ D+ + RS+G+ F+ Y E A A+
Sbjct: 284 KLFIGGLAWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYANEADAETAIAS 343
Query: 247 MNGKIINGWMIVVDVA 262
MN +G I VD A
Sbjct: 344 MNNIEFDGRTIRVDRA 359
>gi|225562488|gb|EEH10767.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325092417|gb|EGC45727.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 136
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ TLRA FE +G + E ++ D+ + RS+G+ F+ + ++ A AA+
Sbjct: 3 KLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMNA 62
Query: 247 MNGKIINGWMIVVDVA 262
M+ + +G +I VD A
Sbjct: 63 MSNQEFDGRVIRVDKA 78
>gi|193662169|ref|XP_001952270.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 414
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE +G + ++ + +KI + +GYAFIEY E +A K
Sbjct: 102 KTLFVARINYDTSESKLRREFELYGPIKKIVVTHNKIDGKPRGYAFIEYEYERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVER 179
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 52/77 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++FV GLSF+T E+ L AF FG++V+ +I++++ + R +G+ F+ ++ A +A+ E
Sbjct: 8 RIFVGGLSFHTDERKLEEAFRRFGKVVDAQIMLERHTNRHRGFGFVTFSDPRAVESAISE 67
Query: 247 MNGKIINGWMIVVDVAK 263
M+ K ++G I V+ A+
Sbjct: 68 MHTKELDGRTISVNRAE 84
>gi|219519661|gb|AAI44460.1| Unknown (protein for MGC:178002) [Homo sapiens]
gi|223460910|gb|AAI36863.1| RBMY1D protein [Homo sapiens]
Length = 459
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRR 95
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|358056531|dbj|GAA97500.1| hypothetical protein E5Q_04178 [Mixia osmundae IAM 14324]
Length = 287
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%)
Query: 169 SMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKG 228
S VP+ A K+ L V GLS T E+ L F GE+ +V ++ D+ S+RS+G
Sbjct: 32 SQVPARPRNAPAAPTKSNVLGVFGLSVNTRERDLEDVFTRIGEVDKVVVVYDQRSERSRG 91
Query: 229 YAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTT 265
+AF+ +E+ A A+ ++NG+ I+G + VD + TT
Sbjct: 92 FAFVTMRSEDDAEKAIADLNGQEIDGRRVRVDYSLTT 128
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + + +IMD+ + R +G+ F++Y E A A+
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + + +IMD+ + R +G+ F++Y E A A+
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|108709506|gb|ABF97301.1| DAG protein, chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|215768834|dbj|BAH01063.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193208|gb|EEC75635.1| hypothetical protein OsI_12374 [Oryza sativa Indica Group]
gi|222625271|gb|EEE59403.1| hypothetical protein OsJ_11545 [Oryza sativa Japonica Group]
Length = 228
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ M+ P ++ MV Y + L V+G
Sbjct: 59 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPTDPKPSEEDMVAAYVKTLAAVVG 118
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQ 167
+E++A+ IY V + GF + +E + ++ G+PGVL V PD NKDYGG+
Sbjct: 119 SEEEAKKKIYSVCTTTYTGFGALISEELSYKVKGLPGVLWVLPDSYLDVPNKDYGGDLFV 178
Query: 168 NSMV 171
+ V
Sbjct: 179 DGQV 182
>gi|47124558|gb|AAH70298.1| RBMY1A1 protein [Homo sapiens]
gi|312151036|gb|ADQ32030.1| RNA binding motif protein, Y-linked, family 1, member A1 [synthetic
construct]
Length = 459
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRR 95
>gi|62638116|gb|AAX92663.1| RBMY1 [Pan troglodytes]
Length = 146
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|336370661|gb|EGN99001.1| hypothetical protein SERLA73DRAFT_168572 [Serpula lacrymans var.
lacrymans S7.3]
Length = 379
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
PSD EA KT LF++ L SE LR FE FG + V+I+ D RS+GYAF
Sbjct: 105 PSDDPEAIGDPYKT--LFISRLHKGASEMELRRDFESFGTIERVRIVRDS-KGRSRGYAF 161
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
I Y E AA KE +G ING I+VDV +
Sbjct: 162 IVYERERDMKAAYKESDGLHINGKRILVDVER 193
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +L AF +GE+VE KI+ D+ + RS+G+ F+ + EEA +A++
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNG I++G I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +L AF +GE+VE KI+ D+ + RS+G+ F+ + EEA +A++
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNG I++G I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +L AF +GE+VE KI+ D+ + RS+G+ F+ + EEA +A++
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNG I++G I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +L AF +GE+VE KI+ D+ + RS+G+ F+ + EEA +A++
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNG I++G I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +L AF +GE+VE KI+ D+ + RS+G+ F+ + EEA +A++
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNG I++G I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|374314656|ref|YP_005061084.1| RRM domain-containing RNA-binding protein [Sphaerochaeta pleomorpha
str. Grapes]
gi|359350300|gb|AEV28074.1| RRM domain-containing RNA-binding protein [Sphaerochaeta pleomorpha
str. Grapes]
Length = 92
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
KK++V +S+ T+E LR F +G ++ IIMD+ ++R KG+ F+E AA AA+
Sbjct: 2 AKKIYVGNMSYNTTEDDLRELFSQYGNVLSATIIMDRETRRPKGFGFVEMEENSAADAAI 61
Query: 245 KEMNGKIINGWMIVVD--VAKTTPKYSRGR 272
+++GK I+G + V+ +AK +YS R
Sbjct: 62 SQLDGKEIDGRNLRVNEAIAKPRNEYSNNR 91
>gi|156547263|ref|XP_001602052.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Nasonia
vitripennis]
Length = 402
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE +G + ++ +I + I+ + +GYAFIEY E +A K
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNSINGKPRGYAFIEYEHERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAKT 264
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVERA 180
>gi|403370032|gb|EJY84876.1| RNA-binding protein [Oxytricha trifallax]
Length = 722
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 168 NSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSK 227
N +P D SE + +++ G+ + +E L FE +G+++EVK+I D I+K SK
Sbjct: 305 NEDLPIDRSEKYNQENPGNNVYIAGIPRWVNESDLLKTFEKYGKILEVKVIRDHITKNSK 364
Query: 228 GYAFIEYTTEEAASAALKEMNG-KIINGWMIVVDVAKTTPKY 268
G+A++ Y A A++ ++G ++ N WM+ V++AK Y
Sbjct: 365 GFAYVLYERSSDAQRAIEGLDGVRVYNEWMLKVELAKRALPY 406
>gi|351713065|gb|EHB15984.1| Putative RNA-binding protein 3 [Heterocephalus glaber]
Length = 156
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F G L EV + D+ ++RS+ + FI T E AS A +
Sbjct: 7 KLFVGGLNFTTGEQALEEHFSSCGPLSEVAAVKDRETRRSQAFGFIASTNPEHASDATRA 66
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MNG+ + G I VD A + +RG
Sbjct: 67 MNGESLGGRRIRVDRAGKAARGTRG 91
>gi|56090527|ref|NP_001006118.2| RNA-binding motif protein, Y chromosome, family 1 member E [Homo
sapiens]
gi|190360154|sp|A6NEQ0.1|RBY1E_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member E
gi|182888281|gb|AAI60023.1| RNA binding motif protein, Y-linked, family 1, member E [synthetic
construct]
Length = 496
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRR 95
>gi|388519691|gb|AFK47907.1| unknown [Lotus japonicus]
Length = 336
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%)
Query: 48 YSCLDIQMSNPWNSQIGTTLLFPLGTTKHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLG 107
YS L+ N N T+L +HWL+ M+ P ++ +MV+ Y + LT+++G
Sbjct: 62 YSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPENPKPSEQEMVNAYVKTLTQIVG 121
Query: 108 NEKDAQMCIYHVSWQSNFGFCCELDDECAQELTGVPGVLSVQPDENFGSENKDYGGN 164
+E++A IY VS + GF + +E + ++ +PGVL V PD NKDYGG+
Sbjct: 122 SEEEAMKKIYSVSTHTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGD 178
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 3 IYDASCDTHFGFCCNVDEETSRELARLPGVLTVRPDPDYNSVKKDY 48
IY S T+ GF + EE S ++ LPGVL V PD + KDY
Sbjct: 130 IYSVSTHTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDY 175
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G + EV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRG 271
+EMNGK ++G I V+ A T P++ G
Sbjct: 66 AREMNGKSLDGKNIKVEQA-TKPQFESG 92
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like [Ornithorhynchus
anatinus]
Length = 270
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L F +G++ EV ++ D+ ++RS+G+ F+ + + A A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|56090533|ref|NP_001006120.2| RNA-binding motif protein, Y chromosome, family 1 member D [Homo
sapiens]
gi|190360153|sp|P0C7P1.1|RBY1D_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member D
Length = 496
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRR 95
>gi|4826974|ref|NP_005049.1| RNA-binding motif protein, Y chromosome, family 1 member A1 [Homo
sapiens]
gi|378522864|sp|P0DJD3.1|RBY1A_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member A1; AltName: Full=RNA-binding motif protein 1;
AltName: Full=RNA-binding motif protein 2; AltName:
Full=Y chromosome RNA recognition motif 1; Short=hRBMY
gi|452367|emb|CAA53659.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRR 95
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T++ +L AF FGE+V+ K+I D+ + RS+G+ F+ + E + + A+K+
Sbjct: 6 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I V+ A
Sbjct: 66 MNGKELDGRNITVNQA 81
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK ++G I V+ A
Sbjct: 66 ARDMNGKSLDGKAIKVEQA 84
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAQDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 170 MVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGY 229
+ S+S S + + K+FV G+S+ T E LR AF +GE+V+ KII+D+ + RS+G+
Sbjct: 18 VTASNSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGF 77
Query: 230 AFIEYTTEEAASAALKEMNGKIINGWMIVVDVA 262
AF+ +T+ E AS A+ +++G+ ++G I V+ A
Sbjct: 78 AFVTFTSTEEASNAM-QLDGQDLHGRRIRVNYA 109
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 11/99 (11%)
Query: 173 SDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI 232
S+ + A P+Q++TKK+FV GL+ +E R FE FG + +V ++ D ++R +G+ FI
Sbjct: 93 SNIAHAPPSQVRTKKIFVGGLAPTVTENDFRKYFEQFGTITDVVVMYDHSTQRPRGFGFI 152
Query: 233 EYTTEEAASAALK----EMNGKIINGWMIVVDVAKTTPK 267
Y +E+A L+ ++NGK+ V+V + PK
Sbjct: 153 TYDSEDAVDQVLQKTFHDLNGKM-------VEVKRAVPK 184
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 35/48 (72%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEY 234
KLF+ G+S+ T+E L+ F+ FGE+VE I+ D+ ++R++G+ F+ +
Sbjct: 7 KLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVF 54
>gi|219881900|gb|ACL52165.1| cold response protein 2 [Metarhizium anisopliae]
Length = 183
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T E TLR FE FG + E ++ D+ + RS+G+ F+ YT E A A+
Sbjct: 3 KLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQENDAQNAIAA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN +G I VD A
Sbjct: 63 MNNVEFDGRTIRVDKA 78
>gi|170099527|ref|XP_001880982.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644507|gb|EDR08757.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 379
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 167 QNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
++S P+D EA KT LF++ L +E LR FEG+G + V+I+ DK RS
Sbjct: 92 KSSYKPADDPEAVGDPYKT--LFISRLHKTATETDLRREFEGYGTIERVRIVRDKKG-RS 148
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
+GYAF+ Y E AA KE +G I G I+VDV +
Sbjct: 149 RGYAFVVYERERDMKAAYKESDGLHIMGKRILVDVER 185
>gi|431916215|gb|ELK16464.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 138
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLS T EK L A F +G ++EV ++ D+ + +S+G+AF+ + A AA ++
Sbjct: 9 KLFIGGLSPETDEKALDAEFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAARD 68
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGR 272
MNGK ++G I V A T P + GR
Sbjct: 69 MNGKSLDGKAIKVAQA-TKPAFESGR 93
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK ++G I V+ A
Sbjct: 66 ARDMNGKSLDGKAIKVEQA 84
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 10/96 (10%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV G+S+ T+EK L+ FE +G + V++I D+ K +GY FIE+ + A K
Sbjct: 100 LFVGGISYDTTEKKLKREFEQYGSIKRVRLIYDRNGK-PRGYGFIEFENDRDMKEAYKNA 158
Query: 248 NGKIINGWMIVVDV--AKTTPKY-------SRGRPR 274
+GK I+G ++VDV A+T P + RG+PR
Sbjct: 159 DGKKIDGRRVLVDVERARTVPGWLPRRLGGGRGKPR 194
>gi|194336480|ref|YP_002018274.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308957|gb|ACF43657.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 95
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+++ L++ SE LR AF FGE+ II DK S RSKG+ F+E + A A++ M
Sbjct: 3 IYIGNLAYTVSEDDLRDAFSEFGEVANASIINDKFSGRSKGFGFVEMPKDSEAREAIESM 62
Query: 248 NGKIINGWMIVVDVAK 263
NGK +NG + V+ AK
Sbjct: 63 NGKDLNGRTVTVNEAK 78
>gi|432110138|gb|ELK33915.1| Putative RNA-binding protein 3 [Myotis davidii]
Length = 123
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKII 252
MNG+++
Sbjct: 67 MNGEVV 72
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G + EV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRG 271
+EMNGK ++G I V+ A T P++ G
Sbjct: 66 AREMNGKSLDGKNIKVEQA-TKPQFESG 92
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL+V LS+ T++ TLR F FGE+ + I+ D+ + R++G+ F+ ++TEE A+AA+
Sbjct: 3 KLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVDA 62
Query: 247 MNGKIINGWMIVVDVAKTTP 266
+N + ++G I V+VA P
Sbjct: 63 LNEQELDGRRIRVNVANARP 82
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 7 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 66
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 67 ARDMNGKSLDGKAIKVEQA-TKPSF 90
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AF FGE++E KII D+ + RS+G+ F+ +++E++ A++
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG+ ++G I V+ A++
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|443900131|dbj|GAC77458.1| U1 small nuclear ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 333
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
P D++EA+P KT LF+ L++ +EK L F+ +G + ++++ D+ K S+GYAF
Sbjct: 118 PHDNAEATPDAYKT--LFLARLAYDVTEKDLHREFDMYGPIETIRLVRDREGK-SRGYAF 174
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
I Y E AA K+ G ING ++VDV +
Sbjct: 175 IAYERERDMRAAWKDAEGIKINGRRVMVDVER 206
>gi|54633344|ref|NP_001006121.1| RNA-binding motif protein, Y chromosome, family 1 member B [Homo
sapiens]
gi|190360159|sp|A6NDE4.2|RBY1B_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B
Length = 496
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRR 95
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|223461509|gb|AAI40759.1| Unknown (protein for MGC:176435) [Homo sapiens]
Length = 459
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRR 95
>gi|296421441|ref|XP_002840273.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636488|emb|CAZ84464.1| unnamed protein product [Tuber melanosporum]
Length = 91
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T + LR F+ FG + E ++ D+ + RS+G+ F+ Y+++E A+AA+
Sbjct: 3 KLFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMDN 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGR 272
MN +G I VD A + + RGR
Sbjct: 63 MNDVEFDGRRIRVDKA-SDRRQGRGR 87
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|45382747|ref|NP_990009.1| transformer-2 protein homolog beta [Gallus gallus]
gi|224059830|ref|XP_002195659.1| PREDICTED: transformer-2 protein homolog beta isoform 1
[Taeniopygia guttata]
gi|11494371|gb|AAG35783.1|AF282244_1 transformer-2 beta [Gallus gallus]
Length = 289
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G + +V I+ D+ S+RS+G+AF+ + E A A +
Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERA 179
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 180 NGMELDGRRIRVDFSITKRPHTPTPGIYMGRP 211
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK ++G I V+ A
Sbjct: 66 ARDMNGKSLDGKAIKVEQA 84
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T+ +TL AF FG++++ K+I D+ + RS+G+ F+ +++E++ A++
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|67525063|ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gi|40744384|gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ LR F +G + E ++ D+ + RS+G+ F+ + +E A AA+
Sbjct: 3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MN + +G +I VD A P G
Sbjct: 63 MNNQEFDGRIIRVDKASERPAARNG 87
>gi|333377706|ref|ZP_08469439.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
gi|332883726|gb|EGK04006.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
Length = 106
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+F+ GLS+ ++ LR F +GE+ K+IMDK + RSKGY F+E A A++E+
Sbjct: 3 IFIAGLSYSINDNDLRDLFNEYGEISSAKVIMDKATGRSKGYGFVELEDNAAGQKAIEEL 62
Query: 248 NGKIINGWMIVVDVAKTTPKYSRG-RPR 274
NG +G I V A+ P+ G RPR
Sbjct: 63 NGAEYDGRTISVSEAR--PRTEGGDRPR 88
>gi|326925689|ref|XP_003209043.1| PREDICTED: transformer-2 protein homolog beta-like [Meleagris
gallopavo]
Length = 302
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G + +V I+ D+ S+RS+G+AF+ + E A A +
Sbjct: 133 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERA 192
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 193 NGMELDGRRIRVDFSITKRPHTPTPGIYMGRP 224
>gi|297836326|ref|XP_002886045.1| hypothetical protein ARALYDRAFT_480534 [Arabidopsis lyrata subsp.
lyrata]
gi|297331885|gb|EFH62304.1| hypothetical protein ARALYDRAFT_480534 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 177 EASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTT 236
E++ I + +FV G + T+ + L+AAFE +GE+ + ++MDK + R KGY F+++ T
Sbjct: 389 ESADRDIAQRNIFVRGFGWDTTHENLKAAFETYGEIEDCSVVMDKDTGRGKGYGFVQFKT 448
Query: 237 EEAASAALKEMNGKIINGWMIVVDVAKTTP 266
+ A ALK ++ N ++V ++A P
Sbjct: 449 RKGAREALKRPEKRMYN-RIVVCNLASKKP 477
>gi|209735756|gb|ACI68747.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 81
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 49/73 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + +V +I DK + RS+G+ F++Y E A AL+
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEG 65
Query: 247 MNGKIINGWMIVV 259
MNGK ++ +V+
Sbjct: 66 MNGKSVDLIFVVL 78
>gi|332870645|ref|XP_003319027.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 1 [Pan troglodytes]
Length = 497
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK ++G I V+ AK
Sbjct: 68 MNGKSLDGKAIKVEQAK 84
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 175 SSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEY 234
S+ SP +TKK+FV GL+ +E R FE FG + +V ++ D ++R +G+ FI Y
Sbjct: 95 STHGSPGPSRTKKIFVGGLASTVNEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITY 154
Query: 235 TTEEAASAAL----KEMNGKIINGWMIVVDVAKTTPK 267
+EEA AL E+NGK+ V+V + PK
Sbjct: 155 DSEEAVDKALFKTFHELNGKM-------VEVKRAVPK 184
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ G+S+ T+E LR FE +GE+VE I+ D+ + R++G+ FI + A + E
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
+ +I+G M V+ K P+
Sbjct: 67 KH--MIDGRM--VEAKKAVPR 83
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV L F E L+ FE FGE+ VKII D+ + RSKG+ FIE +EAA A+ E+
Sbjct: 3 IFVGSLPFKVEESELKEVFEEFGEVTTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEV 62
Query: 248 NGKIINGWMIVVDVAK 263
NG + G IVV+ A+
Sbjct: 63 NGAELYGRTIVVNQAE 78
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ +K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 7 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 66
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 67 ARDMNGKSLDGKAIKVEQA-TKPSF 90
>gi|413956851|gb|AFW89500.1| DAG protein [Zea mays]
Length = 410
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 75 KHWLVRMDKPGVGV----VTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCE 130
+HWLV M+ P +T+ +++D Y + L +V+G+E++A+ IY VS + FGF
Sbjct: 87 EHWLVIMEPPPGDASNPDITRDEIIDSYIKTLAQVVGSEEEARQKIYSVSTRHYFGFGAL 146
Query: 131 LDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSM-VPSD 174
+ +E + +L +P V V PD +NKDYGG N VP D
Sbjct: 147 VSEELSYKLKEIPKVRWVLPDSYLDVKNKDYGGEPFINGQAVPYD 191
>gi|408398680|gb|EKJ77809.1| hypothetical protein FPSE_02043 [Fusarium pseudograminearum CS3096]
Length = 178
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T E TLR FE FG + E ++ D+ + RS+G+ F+ YT E A A+
Sbjct: 3 KLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQNAIAA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN +G I VD A
Sbjct: 63 MNNVEFDGRNIRVDKA 78
>gi|342889186|gb|EGU88353.1| hypothetical protein FOXB_01152 [Fusarium oxysporum Fo5176]
Length = 170
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T E TLR FE FG + E ++ D+ + RS+G+ F+ YT E A A+
Sbjct: 3 KLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIAT 62
Query: 247 MNGKIINGWMIVVDVA 262
MN +G I VD A
Sbjct: 63 MNNVEFDGRTIRVDKA 78
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T ++ L AF FGE+VE KII D+ + RS+G+ F+ + E+A A++
Sbjct: 9 RCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG+ ++G I V+ A++
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL T+EK L F +G +VEV ++ D+ + +S+G+AF+ + + A A +E
Sbjct: 9 KLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 247 MNGKIINGWMIVVDVAKTTPKY 268
MNGK ++G I V+ A T P++
Sbjct: 69 MNGKSLDGKPIKVEQA-TKPQF 89
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 54/78 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AF FGE++E KI+ D+ + RS+G+ F+ ++ E+A A++
Sbjct: 9 RCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMMDAIEA 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 164 NNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKIS 223
+ L NS V S S+ + +I L+V + K L F FG++ +++ D +
Sbjct: 472 STLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDT 531
Query: 224 KRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYS 269
+KGY FI++T E+A+ A+ MNG ++ G MI+V VA +P S
Sbjct: 532 FSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSAS 577
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 174 DSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
D+S+ + KL+V LS + L F FGE+ K+ D + SKGY F++
Sbjct: 380 DNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQ 439
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVA 262
Y++ A+ A+ +NG++++G I V V+
Sbjct: 440 YSSPHHAAEAVIHLNGRLVDGRKIEVRVS 468
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
++ L+V L L F FG++V +++ D + S+GY F++Y+ AS
Sbjct: 293 EVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCAS 352
Query: 242 AALKEMNGKIINGWMIVVDVA 262
A+K MNG+++ G + V VA
Sbjct: 353 EAIKRMNGRLVEGRALEVRVA 373
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
QI L+V+ L Y + + L F G++ + K+++++ + SKG+ F+++ +A+
Sbjct: 773 QIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAA 832
Query: 242 AALKEMNGKIINGWMIVVDVAKTTP 266
AL MNG ++G ++ V +A P
Sbjct: 833 VALTHMNGYPLDGHVLEVRIAGVHP 857
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 32 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 91
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 92 ARDMNGKSLDGKAIKVEQA-TKPSF 115
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 55/77 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF +GE+++ KII D+ + RS+G+ F+ +++E++ A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK ++G I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 55/77 (71%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AAF +GE+++ KII D+ + RS+G+ F+ +++E++ A++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK ++G I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T ++ LR FE FG++ E ++ D+ + RS+G+ F+ Y + A AA++
Sbjct: 3 KLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G I VD A
Sbjct: 63 MNNEEFDGRRIRVDKA 78
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T ++ LR FE FG++ E ++ D+ + RS+G+ F+ Y + A AA++
Sbjct: 3 KLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G I VD A
Sbjct: 63 MNNEEFDGRRIRVDKA 78
>gi|148684912|gb|EDL16859.1| mCG120440 [Mus musculus]
Length = 366
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L AF +G ++EV ++ D+ + +S+G+AF+ + A AA
Sbjct: 37 RPGKLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAA 96
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK ++G I V A
Sbjct: 97 ARDMNGKSLDGKAIKVAQA 115
>gi|410060051|ref|XP_003949287.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
A1-like [Pan troglodytes]
Length = 184
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLDGKAIKVEQAKKPSFQSDGRRR 95
>gi|449266970|gb|EMC77948.1| Transformer-2 like protein beta, partial [Columba livia]
Length = 156
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G + +V I+ D+ S+RS+G+AF+ + E A A +
Sbjct: 64 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERA 123
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 124 NGMELDGRRIRVDFSITKRPHTPTPGIYMGRP 155
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|312129340|ref|YP_003996680.1| rnp-1 like RNA-binding protein [Leadbetterella byssophila DSM
17132]
gi|311905886|gb|ADQ16327.1| RNP-1 like RNA-binding protein [Leadbetterella byssophila DSM
17132]
Length = 87
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV LSF T + LR AFE FGE+ K+IMD + RSKG+ F+E AS A++ +
Sbjct: 3 IFVAKLSFDTQDAGLREAFENFGEVKSAKVIMDNYTGRSKGFGFVEMNDHAEASNAIRSL 62
Query: 248 NGKIINGWMIVVDVAK 263
N ++G IVV A+
Sbjct: 63 NDSELDGRTIVVKQAE 78
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KL+V L++ +++L+AAF FG + K++MD+ + RSKG+ F+E T A AA+
Sbjct: 4 KLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAING 63
Query: 247 MNGKIINGWMIVVDVAKTTPKYSR 270
MNG+ + G +VV+ A+ P+ R
Sbjct: 64 MNGQPLEGRAVVVNEAR--PREER 85
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|146197791|dbj|BAF57614.1| snRNP70K protein [Dugesia japonica]
Length = 348
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E +R FEG+G + ++++ + ++ + +GY FIEY E AA K
Sbjct: 106 KTLFVARINYDTTENKIRREFEGYGPIKTIRMVKNAMNNKPRGYCFIEYEHERDMHAAYK 165
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 166 NADGKKIDGHRVLVDVER 183
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ LR FE FG++ E ++ D+ + RS+G+ F+ ++++ A A+
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMDA 62
Query: 247 MNGKIINGWMIVVDVA-KTTPKYSRG 271
MN + +G I VD A + P+ + G
Sbjct: 63 MNNQEFDGRTIRVDKASERAPRNNGG 88
>gi|332870647|ref|XP_003319028.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 2 [Pan troglodytes]
Length = 460
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK ++G I V+ AK
Sbjct: 68 MNGKSLDGKAIKVEQAK 84
>gi|449494871|ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
sativus]
Length = 95
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+LF++ LS YT+ + L+ F FG + E ++I D ++R KG+ F+ + + A ALK
Sbjct: 8 ELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALKA 67
Query: 247 MNGKIINGWMIVVDVAKT 264
M+G+I++G +I V+ AKT
Sbjct: 68 MDGRIVDGRLIFVEFAKT 85
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYS 269
+E+NGK ++G I V+ A T P +S
Sbjct: 66 ARELNGKALDGKPIKVEQA-TKPSFS 90
>gi|406983427|gb|EKE04629.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 96
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ L+F TSE+ L + +GE+ ++II D+ + RSKG+ F+E T+E A + ++
Sbjct: 2 KLFIGNLNFKTSEEDLMELLKEYGEVKSLQIIKDRDTGRSKGFGFVEMATKEQAESVMEN 61
Query: 247 MNGKIINGWMIVVDVAKTTPKYSR-GRP 273
+NG +G ++ VD AK + R GRP
Sbjct: 62 LNGAEFDGKVLKVDYAKEKEESGRGGRP 89
>gi|126030490|pdb|2FY1|A Chain A, A Dual Mode Of Rna Recognition By The Rbmy Protein
Length = 116
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L+A F G + EV +I D+ SK S+G+AFI + A A K+
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAAKD 67
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MNGK ++G I V+ AK S GR R
Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRR 95
>gi|197102777|ref|NP_001124733.1| RNA binding motif (RNP1, RRM) protein 3 [Pongo abelii]
gi|55725705|emb|CAH89634.1| hypothetical protein [Pongo abelii]
Length = 90
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 247 MNGKIING 254
MNG+ + G
Sbjct: 67 MNGEGVEG 74
>gi|307173080|gb|EFN64210.1| U1 small nuclear ribonucleoprotein 70 kDa [Camponotus floridanus]
Length = 409
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE +G + ++ +I + I+ + +GYAFIEY E +A K
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVER 179
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T++ +L AF FGE+V+ K+I D+ + RS+G+ F+ + E + + A+K+
Sbjct: 3 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 62
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I V+ A
Sbjct: 63 MNGKELDGRNITVNQA 78
>gi|229485954|sp|P0C8Z4.1|RMXL3_PANTR RecName: Full=RNA-binding motif protein, X-linked-like-3
Length = 992
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ +KLFV GL+ T EK L+A F +G +++V +I D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPEKLFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVV 259
++MNGK ++G I+V
Sbjct: 66 ARDMNGKYLDGKAIMV 81
>gi|406886422|gb|EKD33455.1| hypothetical protein ACD_76C00026G0004 [uncultured bacterium]
Length = 83
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV +S+ ++ L F GE+V +I+MDK++ RS+G+ F+E T+E A AA+K
Sbjct: 4 KLFVGNISWDATDSDLSKLFAEVGEVVSAQIVMDKLTGRSRGFGFVEMATDELAEAAIKA 63
Query: 247 MNGKIINGWMIVVDVAK 263
++GK G I V+VA+
Sbjct: 64 LDGKDFLGRPITVNVAR 80
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 27/188 (14%)
Query: 92 AQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE---------CAQELTGV 142
A++ R + + +G +AQ+ +S +S E DE Q+L G+
Sbjct: 179 ARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGVGYVEFKDEDSVATALQLTGQKLLGI 238
Query: 143 PGVLSV-QPDENFGSENKDYGGNNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKT 201
P ++ V + ++N + N + GG P + +L+V + F +E+
Sbjct: 239 PVIVQVTEAEKNRQARNTEAGG--------------PHPNHVPFHRLYVGNIHFNVTEED 284
Query: 202 LRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDV 261
LRA FE FGEL V++ D+ S RS+GY F+++ A AL++MNG + G I V +
Sbjct: 285 LRAVFEPFGELEFVQLQKDE-SDRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRVGL 343
Query: 262 A--KTTPK 267
K TP+
Sbjct: 344 GNDKFTPE 351
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+ +FV L+ + L+ FE G + E +I+ D+IS RSKG ++E+ E++ + AL
Sbjct: 170 RTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGVGYVEFKDEDSVATAL- 228
Query: 246 EMNGKIINGWMIVVDVAK 263
++ G+ + G ++V V +
Sbjct: 229 QLTGQKLLGIPVIVQVTE 246
>gi|302765773|ref|XP_002966307.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
gi|300165727|gb|EFJ32334.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
Length = 289
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V GL++ +E +R+ FE FGE+ +VKII D + S+GY FI + T EAA+ A+ M
Sbjct: 9 VYVGGLAYDVTEDLIRSTFEEFGEIDKVKIIQDHDGQ-SRGYGFITFATSEAANGAIYGM 67
Query: 248 NGKIINGWMIVVDVAK 263
NGK++ G I V+ K
Sbjct: 68 NGKVVAGRSIRVNEVK 83
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 53 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 112
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 113 ARDMNGKSLDGKAIKVEQA-TKPSF 136
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 175 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 234
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 235 ARDMNGKSLDGKAIKVEQA-TKPSF 258
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G + EV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRG 271
+EMNGK ++G I V+ A T P++ G
Sbjct: 66 AREMNGKSLDGKNIKVEQA-TKPQFESG 92
>gi|310793386|gb|EFQ28847.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 171
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T E TLR FE FG + E ++ D+ + RS+G+ F+ YT + A A+
Sbjct: 3 KLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQDGDAQKAISA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN +G I VD A
Sbjct: 63 MNNVEFDGRTIRVDKA 78
>gi|125548231|gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indica Group]
Length = 113
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
T +LF+ GLS + +E +L AF +G+++E I+ DK++ R KG+ F+++ +EEAA+ A
Sbjct: 36 TYRLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAK 95
Query: 245 KEMNGK 250
+EMNGK
Sbjct: 96 EEMNGK 101
>gi|35505506|gb|AAH57796.1| RNA binding motif protein, X-linked-like 2 [Homo sapiens]
Length = 392
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ G + T EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPGKLFIGGFNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVAQA-TKPAF 89
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+F T+E L AF +G + EV ++ D+ +KRS+G+ F+ + + A A+
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKSVDGRQIRVDQA 81
>gi|357475705|ref|XP_003608138.1| Heterogeneous nuclear ribonucleoprotein A3-like protein [Medicago
truncatula]
gi|355509193|gb|AES90335.1| Heterogeneous nuclear ribonucleoprotein A3-like protein [Medicago
truncatula]
Length = 401
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KLFV GLS T+ +TLR F +G+L E +I DK + RSKGY F+ Y + A ALK
Sbjct: 76 RKLFVRGLSGETTTETLRTVFSSYGDLDEAIVIFDKATGRSKGYGFVVYRHVDGAVLALK 135
Query: 246 EMNGKIINGWMIVVDVA 262
E + K I+G M V +A
Sbjct: 136 EPSKK-IDGRMTVTQLA 151
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ ++K+FV + F S ++L + F +GE+ E + DK S +++G+AF Y TEE A
Sbjct: 160 VSSRKVFVGNVPFEVSAESLLSEFSKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGAKN 219
Query: 243 ALKEMNGKIINGWMIVVDVA 262
++ E + K ++G ++ A
Sbjct: 220 SVAE-SMKTVDGHQVICKFA 238
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+F T+E L AF +G + EV ++ D+ +KRS+G+ F+ + + A A+
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKSVDGRQIRVDQA 81
>gi|413933427|gb|AFW67978.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 311
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++FV GLS+ T E+ L+ AF FG++V+V+I++++ + R +G+ F+ + A +A+KE
Sbjct: 8 RIFVGGLSWQTDERKLQDAFGRFGKVVDVQIMLERHTYRHRGFGFVTFEDRRAVDSAIKE 67
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
M G+ ++G I V+ K PK
Sbjct: 68 MRGQELDGRTISVN--KAEPK 86
>gi|225680987|gb|EEH19271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226292701|gb|EEH48121.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 148
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+++T+++TLR FE +G + E ++ D+ + RS+G+ F+ ++ + A AA+
Sbjct: 3 KLFVGGLAWHTTDQTLRQGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFSRDVEADAAMNA 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSR 270
M+ + +G +I VD A R
Sbjct: 63 MSNQEFDGRVIRVDKASDRASAHR 86
>gi|380019745|ref|XP_003693763.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Apis
florea]
Length = 409
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE +G + ++ +I + I+ + +GYAFIEY E +A K
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAKT 264
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVERA 180
>gi|340715914|ref|XP_003396452.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
terrestris]
gi|350396793|ref|XP_003484667.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
impatiens]
Length = 409
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE +G + ++ +I + I+ + +GYAFIEY E +A K
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAKT 264
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVERA 180
>gi|65301143|ref|NP_083936.1| RNA-binding motif protein, X-linked-like-2 [Mus musculus]
gi|12838734|dbj|BAB24311.1| unnamed protein product [Mus musculus]
Length = 385
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T EK L AF +G ++EV ++ D+ + +S+G+AF+ + A AA
Sbjct: 6 RPGKLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAA 65
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK ++G I V A
Sbjct: 66 ARDMNGKSLDGKAIKVAQA 84
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T+++ L+ F FG++++ KII D+ S RS+G+ F+ + E+A A++E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G +I V+ A++
Sbjct: 67 MNGKELDGRVITVNEAQS 84
>gi|328777938|ref|XP_623789.3| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa isoform 1
[Apis mellifera]
Length = 409
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE +G + ++ +I + I+ + +GYAFIEY E +A K
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAKT 264
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVERA 180
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV +I D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV +I D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 53/78 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T++ TL AF +GE+VE KII D+ + RS+G+ F+ + E+A A++
Sbjct: 7 RCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG+ ++G I V+ A++
Sbjct: 67 MNGQDLDGRNITVNEAQS 84
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 54/78 (69%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T ++ L+ AF FGE+++ KII D+ + RS+G+ F+ + +E++ A++
Sbjct: 7 RCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMRDAIEG 66
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 67 MNGKDLDGRNITVNEAQS 84
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T+++TLR F +G + E ++ D+ + RS+G+ F+ + +E A AA+
Sbjct: 3 KLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMNA 62
Query: 247 MNGKIINGWMIVVDVA 262
M+ + +G MI VD A
Sbjct: 63 MSNQEFDGRMIRVDKA 78
>gi|226493078|ref|NP_001149362.1| DAG protein [Zea mays]
gi|195626648|gb|ACG35154.1| DAG protein [Zea mays]
Length = 420
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 75 KHWLVRMDKPGVGV----VTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCE 130
+HWLV M+ P +T+ +++D Y + L +V+G+E++A+ IY VS + FGF
Sbjct: 88 EHWLVIMEPPPGDASNPDITRDEIIDSYIKTLAQVVGSEEEARQKIYSVSTRHYFGFGAL 147
Query: 131 LDDECAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSM-VPSD 174
+ +E + +L +P V V PD +NKDYGG N VP D
Sbjct: 148 VSEELSYKLKEIPKVRWVLPDSYLDVKNKDYGGEPFINGQAVPYD 192
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VE+ ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like, partial
[Saimiri boliviensis boliviensis]
Length = 268
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|383866115|ref|XP_003708517.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Megachile rotundata]
Length = 410
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ TSE LR FE +G + ++ +I + I+ + +GYAFIEY E +A K
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 246 EMNGKIINGWMIVVDVAKT 264
+GK I+G ++VDV +
Sbjct: 162 HADGKKIDGRRVLVDVERA 180
>gi|348559532|ref|XP_003465570.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cavia
porcellus]
Length = 440
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|154416377|ref|XP_001581211.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915436|gb|EAY20225.1| hypothetical protein TVAG_021720 [Trichomonas vaginalis G3]
Length = 202
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 174 DSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
D E P I + V LSF T+E++L+ F FG ++ +I + S +SKG+ FIE
Sbjct: 36 DDKEKKPETIT---VHVGNLSFETTEESLKIKFSEFGNVISSRIPVRAQSGKSKGFGFIE 92
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDV 261
Y T+E A A+ EMN K G IVVD+
Sbjct: 93 YATQEEADKAIAEMNKKEFEGRTIVVDI 120
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+F T+E L F +G++ EV ++ D+ +KRS+G+ F+ + + A A+
Sbjct: 5 KLFIGGLNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 64
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 65 MNGKAVDGRQIRVDQA 80
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VE+ ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|338706322|ref|YP_004673090.1| putative RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|378972859|ref|YP_005221463.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|378973926|ref|YP_005222532.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|378974988|ref|YP_005223596.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
gi|378981835|ref|YP_005230140.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|384421880|ref|YP_005631239.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|291059746|gb|ADD72481.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|335344383|gb|AEH40299.1| probable RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|374677182|gb|AEZ57475.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|374678252|gb|AEZ58544.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|374679321|gb|AEZ59612.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|374680386|gb|AEZ60676.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
Length = 89
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 53/84 (63%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ K++V L++ T+E L + F FGE++ V +I DK+++RSKG+ F+E + E+A +
Sbjct: 2 SAKIYVGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGFGFVEMESAESAELVI 61
Query: 245 KEMNGKIINGWMIVVDVAKTTPKY 268
E+N K G + V+ A+ P++
Sbjct: 62 NELNEKEFEGRRLRVNYAEEKPRF 85
>gi|71021383|ref|XP_760922.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
gi|46100873|gb|EAK86106.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
Length = 342
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
PS++ +A+P KT LF+ L + +E L F+ +G + ++K+I DK K S+GYAF
Sbjct: 119 PSNNPDATPDAYKT--LFLARLDYSVTESDLHREFDMYGPIEQIKLIRDKNGK-SRGYAF 175
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
I Y E AA K+ G ING ++VDV +
Sbjct: 176 IAYERERDMKAAYKDAEGIKINGRRVMVDVER 207
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T L AF FGE+VE K+I D+ + RS+G+ F+ + TE+A A++
Sbjct: 9 RCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG+ ++G I V+ A++
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
AltName: Full=RNA binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VE+ ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK ++G I V+ A
Sbjct: 66 ARDMNGKSLDGKAIKVEQA 84
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A ++
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 247 MNGKIINGWMIVVDVAKTTPKY 268
MNGK ++G I V+ A T P +
Sbjct: 69 MNGKSLDGKAIKVEQA-TKPSF 89
>gi|356563602|ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 160
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ K+FV GL TSE L F FGE+ +++ +DK S +S G+A+I + EE+A A+
Sbjct: 67 SPKIFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLAV 126
Query: 245 KEMNGKIINGWMIVVDVAK 263
EMNGK G I V +AK
Sbjct: 127 LEMNGKFFYGRFIYVTIAK 145
>gi|356521446|ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Glycine max]
Length = 384
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KLFV GL+ T+ +TLR F FGEL E +I+DK + RSKGY F+ ++ + A ALK
Sbjct: 83 RKLFVRGLAGETTTETLRGVFSAFGELDEAIVIIDKATGRSKGYGFVVFSHVDGAILALK 142
Query: 246 EMNGKIINGWMIVVDV 261
E + K I+G M V +
Sbjct: 143 EPSKK-IDGRMTVTQL 157
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
+ +K+FV + F S + L F FGE+ E + DK S +S+G+AF Y TEE A A
Sbjct: 168 VSLRKVFVGNVPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARA 227
Query: 243 ALKEMNGKIINGWMIV----VDVAKTTP 266
+L E K I G ++ VD KT P
Sbjct: 228 SLVEPL-KTIEGHQVICKLAVDNKKTKP 254
>gi|255036739|ref|YP_003087360.1| RNP-1 like RNA-binding protein [Dyadobacter fermentans DSM 18053]
gi|254949495|gb|ACT94195.1| RNP-1 like RNA-binding protein [Dyadobacter fermentans DSM 18053]
Length = 241
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV LSF E LR AFE +G++ KII+DKI+++SKG+ F+E E A A+ +
Sbjct: 3 IFVGSLSFKLRESELREAFEKYGKVSSAKIIIDKITRQSKGFGFVEMPDEVEARTAINAL 62
Query: 248 NGKIINGWMIVVDVA-KTTPK 267
NG + G +VV+ + K P+
Sbjct: 63 NGADMYGRPLVVNESQKREPR 83
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GLS+ T + +LR FE FG + + ++ D+ + RS+G+ F+ ++T++ A+AA+
Sbjct: 3 KLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMNA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN + +G I VD A
Sbjct: 63 MNNQEFDGRQIRVDKA 78
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
++ + F+ LS+ T++++L+ AF FG L E K++ DK S RS+G+ F+ + ++A
Sbjct: 2 ADVEEYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAM 61
Query: 241 SAALKEMNGKIINGWMIVVDVAK 263
A++ MNG ++G I VD A+
Sbjct: 62 EDAIEGMNGLDLDGRAITVDKAQ 84
>gi|343961429|dbj|BAK62304.1| U1 small nuclear ribonucleoprotein 70 kDa [Pan troglodytes]
Length = 251
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|281348370|gb|EFB23954.1| hypothetical protein PANDA_006289 [Ailuropoda melanoleuca]
Length = 438
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|67623601|ref|XP_668083.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis TU502]
gi|54659281|gb|EAL37866.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis]
Length = 281
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LF+ L++ T+E+TL+ E +G+++ ++I+ D S+GYAF+E+ E++ A K
Sbjct: 105 LFIARLNYDTTERTLKRELEVYGKILNLRIVKD-FQGESRGYAFVEFDNEDSLKEAYKSF 163
Query: 248 NGKIINGWMIVVDVAK 263
N K I+GW ++VDV +
Sbjct: 164 NKKSIDGWKVLVDVER 179
>gi|66475310|ref|XP_627471.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|32398687|emb|CAD98647.1| U1 small nuclear ribonucleoprotein, possible [Cryptosporidium
parvum]
gi|46228935|gb|EAK89784.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 281
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LF+ L++ T+E+TL+ E +G+++ ++I+ D S+GYAF+E+ E++ A K
Sbjct: 105 LFIARLNYDTTERTLKRELEVYGKILNLRIVKD-FQGESRGYAFVEFDNEDSLKEAYKSF 163
Query: 248 NGKIINGWMIVVDVAK 263
N K I+GW ++VDV +
Sbjct: 164 NKKSIDGWKVLVDVER 179
>gi|73948009|ref|XP_541503.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Canis lupus
familiaris]
Length = 439
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|387907184|ref|YP_006337520.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582077|gb|AFJ90855.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 90
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKI--SKRSKGYAFIEYTTEEAASAAL 244
KL+V LS+ +E+ L+ FE GE+ VKII D+ SKRSKG+ FIE + EE A A+
Sbjct: 5 KLYVGNLSYDMTEQELKKYFESVGEVTHVKIIFDESTSSKRSKGFGFIEMSNEENAKQAI 64
Query: 245 KEMNGKIINGWMIVVDVAKTTPK 267
+++NG + G I+V A+ K
Sbjct: 65 EKLNGTELMGRNIIVSAARPRAK 87
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV +I D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|374316448|ref|YP_005062876.1| RRM domain-containing RNA-binding protein [Sphaerochaeta pleomorpha
str. Grapes]
gi|359352092|gb|AEV29866.1| RRM domain-containing RNA-binding protein [Sphaerochaeta pleomorpha
str. Grapes]
Length = 92
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 55/90 (61%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
KK++V +S+ TSE+ LR F +G ++ II+D+ ++R KG+ F+E + AA AA+
Sbjct: 2 AKKIYVGNMSYNTSEEELRDLFSQYGTVLSASIIIDRETRRPKGFGFVEMEEDSAADAAI 61
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSRGRPR 274
+++GK + G + V+ A P+ +R R
Sbjct: 62 SQLDGKDLGGRNLRVNEAIAKPRPARNNYR 91
>gi|293335932|ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++FV GLS+ T E+ L AF FG++V+ +I++++ + R +G+ F+ + A +A+KE
Sbjct: 8 RIFVGGLSWQTDERKLEDAFGRFGKVVDAQIMVERHTNRHRGFGFVTFEDRRAVDSAIKE 67
Query: 247 MNGKIINGWMIVVDVAKTTPK 267
M+G+ I+G I V+ K PK
Sbjct: 68 MHGQEIDGRTISVN--KAEPK 86
>gi|355703760|gb|EHH30251.1| hypothetical protein EGK_10871 [Macaca mulatta]
Length = 437
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|74140671|dbj|BAB29263.3| unnamed protein product [Mus musculus]
gi|74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus]
Length = 248
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|395529354|ref|XP_003766781.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa [Sarcophilus harrisii]
Length = 439
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|344270065|ref|XP_003406866.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Loxodonta africana]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|77735675|ref|NP_001029535.1| putative RNA-binding protein 3 [Bos taurus]
gi|73587236|gb|AAI03474.1| RNA binding motif (RNP1, RRM) protein 3 [Bos taurus]
gi|296470723|tpg|DAA12838.1| TPA: RNA binding motif protein 3 [Bos taurus]
gi|440912765|gb|ELR62306.1| Putative RNA-binding protein 3 [Bos grunniens mutus]
Length = 90
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66
Query: 247 MNGKIING 254
MNG+ + G
Sbjct: 67 MNGEGVEG 74
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV +I D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|395858380|ref|XP_003801549.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Otolemur
garnettii]
Length = 439
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|149462268|ref|XP_001517310.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Ornithorhynchus anatinus]
Length = 232
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 172 PSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 231
P + S A KT LFV +++ T+E LR FE +G + + ++ K S + +GYAF
Sbjct: 91 PHNDSNAQGDAFKT--LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAF 148
Query: 232 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK 263
IEY E +A K +GK I+G ++VDV +
Sbjct: 149 IEYEHERDMHSAYKHADGKKIDGRRVLVDVER 180
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AF +G+++E KII D+ + RS+G+ F+ +++E+A A++
Sbjct: 8 RCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 67
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG+ ++G I V+ A++
Sbjct: 68 MNGQDLDGRNITVNEAQS 85
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T E++L AF FGELV+ KII D+ + RS+G+ F+ + E++ A++
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNG+ ++G I V+ A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|406952399|gb|EKD82023.1| hypothetical protein ACD_39C01519G0004 [uncultured bacterium]
Length = 83
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ K+FV L F + L F FG++V K+IMD+ S RS+GY F+E+T +A AA+
Sbjct: 2 SSKIFVGNLPFSVDNRKLEEEFAKFGQVVSAKVIMDRNSGRSRGYGFVEFTDPGSAQAAV 61
Query: 245 KEMNGKIINGWMIVVDVAK 263
MN + I G + V +AK
Sbjct: 62 DGMNDQPIEGRKLTVSLAK 80
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 164 NNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKIS 223
+ L NS V S S+ + +I L+V + K L F FG++ +++ D +
Sbjct: 384 STLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDT 443
Query: 224 KRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYS 269
+KGY FI++T E+A+ A+ MNG ++ G MI+V VA +P S
Sbjct: 444 FSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSAS 489
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 174 DSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
D+S+ + KL+V LS + L F FGE+ K+ D + SKGY F++
Sbjct: 292 DNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQ 351
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVA 262
Y++ A+ A+ +NG++++G I V V+
Sbjct: 352 YSSPHHAAEAVIHLNGRLVDGRKIEVRVS 380
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 164 NNLQNSMVPSDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKIS 223
+N + S S QI L+V+ L Y + + L F G++ + K+++++ +
Sbjct: 667 SNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQITQAKVVVERYT 726
Query: 224 KRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTP 266
SKG+ F+++ +A+ AL MNG ++G ++ V +A P
Sbjct: 727 GVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGVHP 769
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
++ L+V L L F FG++V +++ D + S+GY F++Y+ AS
Sbjct: 205 EVDNTNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCAS 264
Query: 242 AALKEMNGKIINGWMIVVDVA 262
A+K MNG+++ G + V VA
Sbjct: 265 EAIKRMNGRLVEGRALEVRVA 285
>gi|9964085|gb|AAG09816.1|AF278702_1 cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+F T+E L AF +G + EV ++ D+ +KRS+G+ F+ + + A A+
Sbjct: 6 KLFIGGLNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNGK ++G I VD A
Sbjct: 66 MNGKSVDGRQIRVDQA 81
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|351703349|gb|EHB06268.1| U1 small nuclear ribonucleoprotein 70 kDa [Heterocephalus glaber]
Length = 431
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|167522944|ref|XP_001745809.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775610|gb|EDQ89233.1| predicted protein [Monosiga brevicollis MX1]
Length = 1128
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 169 SMVPSDSSEASPTQIKTKK--LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 226
+++ S +++A+ + TK+ L + L+F E+ LR F FG++VE+K++ D+ RS
Sbjct: 316 AVLASQANKATTVKRPTKRARLILRNLAFEVDEEKLRRKFTRFGKIVEIKVVRDE-KNRS 374
Query: 227 KGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPKYSR 270
KG+ F+EY T + A++EMNG I G + VD A + + R
Sbjct: 375 KGFGFLEYATVGTGATAIREMNGVEIEGRPMAVDWALSKRDFER 418
Score = 38.1 bits (87), Expect = 4.5, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 167 QNSMVPSDSSEASPTQIKTK-KLFVTGLSFYTSEKTLRAAFEGFGE--LVEVKIIMDKI- 222
+N + + + +P +K +L V L + L+A F G GE + +VK++ D+
Sbjct: 643 RNLEIENKAKMKNPNMFVSKTRLSVHNLPKMLKDAQLKAIFRGAGEGAIKQVKVVRDRAR 702
Query: 223 -----SKRSKGYAFIEYTTEEAASAALKEMN 248
+ RS GY F+E+ E+A AL+ +N
Sbjct: 703 VDREGNPRSLGYGFVEFKDHESAVQALRTIN 733
>gi|159479638|ref|XP_001697897.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158273995|gb|EDO99780.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 394
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K + V LSF +EK LR FE +G + V+++MDK K S+GYAF+EY + A K
Sbjct: 151 KTILVARLSFDVTEKKLRREFEEYGPVKRVRLVMDKNGK-SRGYAFVEYEHKADMKEAYK 209
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I G ++VDV +
Sbjct: 210 AADGKKIEGRRVLVDVER 227
>gi|115496910|ref|NP_001069514.1| U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
gi|117940094|sp|Q1RMR2.1|RU17_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|92098366|gb|AAI14763.1| Small nuclear ribonucleoprotein 70kDa (U1) [Bos taurus]
gi|296477500|tpg|DAA19615.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
Length = 439
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|195577191|ref|XP_002078456.1| GD22521 [Drosophila simulans]
gi|194190465|gb|EDX04041.1| GD22521 [Drosophila simulans]
Length = 348
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 180 PTQIKT------KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIE 233
PT+IK + LF+ +++ TSE LR FE +G + ++ +I D+ S + KGYAFIE
Sbjct: 90 PTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIE 149
Query: 234 YTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y E AA K +GK I+ ++VDV +
Sbjct: 150 YEHERDMHAAYKHADGKKIDSKRVLVDVERA 180
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 54/77 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T +++L AF FGE++E KII D+ + RS+G+ F+ +++E++ A++
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAK 263
MNG+ ++G I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 54 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 113
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 114 HADGKKIDGRRVLVDVER 131
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV +I D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ LR F +G + E ++ D+ + RS+G+ F+ + +E A AA+
Sbjct: 3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
MN + +G +I VD A P G
Sbjct: 63 MNNQEFDGRIIRVDKASERPAARNG 87
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L + F +G +VEV ++ D+ + +S+G+AFI + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKYSRG 271
++MNGK ++G I V+ A T P + G
Sbjct: 66 ARDMNGKSLDGKSIKVEQA-TKPSFESG 92
>gi|432099339|gb|ELK28596.1| U1 small nuclear ribonucleoprotein 70 kDa [Myotis davidii]
Length = 438
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T+ +TL AF FG++++ K+I D+ + RS+G+ F+ +++E++ A++
Sbjct: 9 RCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+FV LS+ ++ L++ FE GE+V + MD+ + RSKG+ ++ ++T EAA A+ EM
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEM 452
Query: 248 NGKIINGWMIVVDVAKTTPK 267
NGK I+G + V+ A TPK
Sbjct: 453 NGKEIDGRAVNVNAA--TPK 470
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+K LFV +SF +E L F G++V V++ D+ + + KG+ ++E+T+ E A +A
Sbjct: 489 SKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAF 548
Query: 245 KEMNGKIINGWMIVVD 260
+NGK I G I +D
Sbjct: 549 NALNGKDIAGRNIRLD 564
>gi|294463997|gb|ADE77519.1| unknown [Picea sitchensis]
Length = 280
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 75 KHWLVRMDKPGVGVVTKAQMVDRYAQILTKVLGNEKDAQMCIYHVSWQSNFGFCCELDDE 134
+HWL+ ++ P G T+ +++D Y + L++V+G+E++A+M IY VS + F F C + +E
Sbjct: 102 EHWLIVLEPP-EGSPTRDEIIDSYIKTLSQVVGSEEEARMKIYSVSTKHYFAFGCLISEE 160
Query: 135 CAQELTGVPGVLSVQPDENFGSENKDYGGNNLQNSM-VPSD 174
+ +L + V V PD K YGG N VP D
Sbjct: 161 LSYKLKPMKNVRWVLPDSYLDPRTKSYGGEPFINGQAVPYD 201
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 55/78 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T + +L AF +GE++E KII+D+ ++RS+G+ F+ ++ +A +A++
Sbjct: 16 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMRSAIEG 75
Query: 247 MNGKIINGWMIVVDVAKT 264
MNGK ++G I V+ A++
Sbjct: 76 MNGKELDGRNITVNEAQS 93
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV +I D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|325190173|emb|CCA24652.1| hypothetical protein TRIADDRAFT_51837 [Albugo laibachii Nc14]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 181 TQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAA 240
T+ K LFV +S+ T+EK LR FE FG + ++++ + K S+GYAFIEY E
Sbjct: 113 TEDAYKTLFVGRISYETTEKQLRHEFEQFGAIKHIRLVEGEEGK-SRGYAFIEYEHEADL 171
Query: 241 SAALKEMNGKIINGWMIVVDVAK 263
AA K +GK I+G +VVDV +
Sbjct: 172 KAAYKFADGKKIDGRRVVVDVER 194
>gi|30681615|ref|NP_850021.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
gi|330252167|gb|AEC07261.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
Length = 347
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%)
Query: 177 EASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTT 236
EA+ + +K+FV GL + T+ +TL FEG+GE+ E +++DK + ++KG+ F+ + T
Sbjct: 95 EAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKT 154
Query: 237 EEAASAALKEMNGKIIN 253
+ A ALKE +I+N
Sbjct: 155 RKGAKEALKEPKKRILN 171
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV +I D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
K++V L++ T+E TLR FE +GE+ VKII D+ S SKG+ F+E ++EEA AA+
Sbjct: 4 KIYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMSSEEAGEAAISA 63
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRG 271
+N + G + V+ A + S G
Sbjct: 64 LNQHELEGRQLRVNKAHERRRSSFG 88
>gi|444705757|gb|ELW47148.1| U1 small nuclear ribonucleoprotein 70 kDa [Tupaia chinensis]
Length = 440
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|340720106|ref|XP_003398484.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus terrestris]
Length = 331
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+ ++V GL+ EK L AAF FGE+V+V+I +D S++ +G+AFIE+ + E A+AA+
Sbjct: 45 RTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAID 104
Query: 246 EMNGKIINGWMIVVDVAK 263
MN + G I V++AK
Sbjct: 105 NMNDSELFGRTIRVNIAK 122
>gi|335289940|ref|XP_003356024.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Sus
scrofa]
Length = 437
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|354493110|ref|XP_003508687.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Cricetulus griseus]
gi|344247885|gb|EGW03989.1| U1 small nuclear ribonucleoprotein 70 kDa [Cricetulus griseus]
Length = 445
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|403299222|ref|XP_003940388.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Saimiri
boliviensis boliviensis]
Length = 438
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|344270020|ref|XP_003406844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Loxodonta africana]
Length = 477
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF GL T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 92 RPGKLFTGGLHTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESSADAKDA 151
Query: 244 LKEMNGKIINGWMIVVDVA 262
++MNGK ++G I V+ A
Sbjct: 152 ARDMNGKSLDGKAIKVEQA 170
>gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa [Homo sapiens]
gi|380503890|ref|NP_001181761.2| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|297277574|ref|XP_001112732.2| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Macaca mulatta]
gi|332856471|ref|XP_001156213.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
troglodytes]
gi|397486481|ref|XP_003814356.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
paniscus]
gi|397486483|ref|XP_003814357.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
paniscus]
gi|402906263|ref|XP_003915922.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Papio anubis]
gi|410054233|ref|XP_003953602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
troglodytes]
gi|410054235|ref|XP_003953603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 3 [Pan
troglodytes]
gi|13635663|sp|P08621.2|RU17_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|315583599|pdb|3PGW|S Chain S, Crystal Structure Of Human U1 Snrnp
gi|315583608|pdb|3PGW|L Chain L, Crystal Structure Of Human U1 Snrnp
gi|337444|gb|AAA36572.1| ribonucleoprotein antigen [Homo sapiens]
gi|337447|gb|AAA03001.1| small ribonucleoprotein 70 kd protein [Homo sapiens]
gi|683580|emb|CAA59278.1| 68 kDa (U1) ribonucleoprotein [Homo sapiens]
gi|12654935|gb|AAH01315.1| Small nuclear ribonucleoprotein 70kDa (U1) [Homo sapiens]
gi|119572831|gb|EAW52446.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|119572833|gb|EAW52448.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|208965530|dbj|BAG72779.1| small nuclear ribonucleoprotein 70kDa polypeptide [synthetic
construct]
gi|380783881|gb|AFE63816.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384941956|gb|AFI34583.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|410265194|gb|JAA20563.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410295940|gb|JAA26570.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410340661|gb|JAA39277.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 437
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T++ TLR F +G + E ++ D + RS+G+ F+ + ++ A AA+
Sbjct: 3 KLFIGGLAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAMNA 62
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
MN + +G +I VD K S RPR
Sbjct: 63 MNNQEFDGRVIRVD------KASESRPR 84
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Macaca mulatta]
Length = 391
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV +I D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKAIKVEQA-TKPSF 89
>gi|426389521|ref|XP_004061168.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Gorilla
gorilla gorilla]
Length = 437
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|426244049|ref|XP_004015848.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Ovis aries]
Length = 340
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|385808623|ref|YP_005845019.1| RRM domain-containing protein [Ignavibacterium album JCM 16511]
gi|383800671|gb|AFH47751.1| RRM domain protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV L + ++ L+ FE +G++ K++ DK ++RSKG+ F+E+ TE ASAA+
Sbjct: 4 KLFVGSLPWSVNDAELKTLFEPYGKVASAKVVTDKQTRRSKGFGFVEFETEAEASAAINA 63
Query: 247 MNGKIINGWMIVVDVAK 263
+NG + G I+V AK
Sbjct: 64 LNGSEVKGRNIIVSEAK 80
>gi|375332101|gb|AFA52590.1| hypothetical protein [Vaucheria litorea]
Length = 312
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +S+ TSEK LR FE +G++ +++++ D + + +GYAFIEY EE A K
Sbjct: 116 KTLFVANMSYDTSEKKLRREFEQYGQIKKIRLVND-LEDQPRGYAFIEYEREEDMHMAYK 174
Query: 246 EMNGKIINGWMIVVDVAK 263
+ +G+ ++ ++VDV +
Sbjct: 175 KADGRKVDSRRLLVDVER 192
>gi|302757806|ref|XP_002962326.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
gi|300169187|gb|EFJ35789.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
Length = 89
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 192 GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKI 251
GLS+ +E ++ AF FGE+ EV+I+ D+ + +SKGY FI Y +E A AL+ M+GK
Sbjct: 1 GLSWGLTEGIVQEAFSSFGEVREVRIVKDRETGKSKGYGFITYVSEADAQDALQAMDGKN 60
Query: 252 INGWMIVVDVA------KTTPKYSRGRPR 274
+NG I V+ A + +P +S G R
Sbjct: 61 LNGREIRVNFAARDIPSRMSPGFSGGVGR 89
>gi|431920778|gb|ELK18551.1| U1 small nuclear ribonucleoprotein 70 kDa [Pteropus alecto]
Length = 423
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|124359615|gb|ABN06003.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
truncatula]
Length = 83
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV+ LSFYT+++ L + F FG L E +I D+ ++R KG+ F+ Y +E A A K
Sbjct: 8 KLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKA 67
Query: 247 MNGKII 252
+NG++I
Sbjct: 68 LNGRVI 73
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L A F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETNEKGLEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
++MNGK ++G I V+ A T P +
Sbjct: 66 ARDMNGKSLDGKSIKVEQA-TKPSF 89
>gi|225447115|ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|297739201|emb|CBI28852.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLS+ EK+L+ AF FG++ EV+I+ DK S RS+G+ F+ ++ E A +A
Sbjct: 39 KLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKDA 98
Query: 247 MNGKIINGWMIVVDVA 262
M+GK G + V A
Sbjct: 99 MDGKAFLGRPLRVSYA 114
>gi|149276657|ref|ZP_01882800.1| RNA binding protein [Pedobacter sp. BAL39]
gi|149232326|gb|EDM37702.1| RNA binding protein [Pedobacter sp. BAL39]
Length = 107
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
K+FV GLS TSE L G++V +KI+ DK++++SKGYAF+E +E A A+
Sbjct: 3 KIFVGGLSSETSEMDLVMFISLHGQVVTIKIVRDKVTRKSKGYAFLEMANQEEADKAVAA 62
Query: 247 MNGKIINGWMIVVDVAKTTP 266
+NG G + V VA TP
Sbjct: 63 LNGATFKGNELTVRVAAETP 82
>gi|374290274|ref|YP_005037327.1| putative RNA-binding protein [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358377066|gb|AEU09254.1| putative RNA-binding protein [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 89
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKIS--KRSKGYAFIEYTTEEAASAAL 244
KL+V LS+ +E+ L+ FE GE++ KII D+ + KRSKG+ FIE + EE A A+
Sbjct: 5 KLYVGNLSYDMTEQELKEYFESIGEVINAKIIFDESTSNKRSKGFGFIEMSNEENAKQAI 64
Query: 245 KEMNGKIINGWMIVVDVAKTTPKYSR 270
+++NG G I+V VA+ P+ R
Sbjct: 65 EKLNGTEFMGRNIIVSVAR--PRIKR 88
>gi|149055933|gb|EDM07364.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_c [Rattus norvegicus]
gi|187469313|gb|AAI67051.1| Snrp70 protein [Rattus norvegicus]
Length = 451
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
gi|83305641|sp|Q62376.2|RU17_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|74144840|dbj|BAE27392.1| unnamed protein product [Mus musculus]
gi|74221620|dbj|BAE21515.1| unnamed protein product [Mus musculus]
gi|124297316|gb|AAI32021.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|124298068|gb|AAI31995.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|148690898|gb|EDL22845.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
gi|148690901|gb|EDL22848.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
Length = 448
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|387019387|gb|AFJ51811.1| Transformer-2 protein [Crotalus adamanteus]
Length = 187
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G + +V I+ D+ S+RS+G+AF+ + + + A A +
Sbjct: 20 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFESVDDAKEAKERA 79
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 80 NGMELDGRRIRVDFSITKRPHTPTPGIYMGRP 111
>gi|400602889|gb|EJP70487.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 181
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T E TLR FE FG + E ++ D+ + RS+G+ F+ Y E A +A+
Sbjct: 3 KLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYNQEADAQSAIAA 62
Query: 247 MNGKIINGWMIVVDVA 262
MN +G I VD A
Sbjct: 63 MNNVEFDGRTIRVDKA 78
>gi|338710246|ref|XP_001917325.2| PREDICTED: LOW QUALITY PROTEIN: u1 small nuclear ribonucleoprotein
70 kDa-like [Equus caballus]
Length = 470
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 135 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 194
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 195 HADGKKIDGRRVLVDVER 212
>gi|428181461|gb|EKX50325.1| RNA recognition motif 1 [Guillardia theta CCMP2712]
Length = 199
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 183 IKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASA 242
I KLFV+GLS+ ++ L AF+ FG E K+++D+ S RS+G+ F+ ++ E +A+
Sbjct: 85 IDPLKLFVSGLSWEVDDQQLMEAFQEFGN-CEAKVMVDRYSGRSRGFGFVTFSEEHSAAK 143
Query: 243 ALKEMNGKIINGWMIVVDVAK 263
A++EMNG+ + G I V A+
Sbjct: 144 AIEEMNGRELLGRQITVTHAR 164
>gi|383408701|gb|AFH27564.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|359806849|ref|NP_001241058.1| uncharacterized protein LOC100776344 [Glycine max]
gi|255634852|gb|ACU17785.1| unknown [Glycine max]
Length = 340
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KLFV GL++ T+ +TLRAAF+ GE+ E +I DK++ +S+GY FI + E+ AL+
Sbjct: 67 RKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIYDKVTGKSRGYGFITFKNMESTQQALR 126
Query: 246 EMNGKIINGWMIVVDVA 262
+ K+I+G + V ++A
Sbjct: 127 APS-KLIDGRLAVCNLA 142
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 173 SDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI 232
S S +S + +KL++ LS + + L F GE+ E + D+ + S+G+ F+
Sbjct: 145 SLSGTSSAPDLSLRKLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFV 204
Query: 233 EYTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y T EAA A+ ++ K + G IVV A +
Sbjct: 205 TYKTAEAAKKAIDDLE-KTLGGRNIVVKYADS 235
>gi|229367606|gb|ACQ58783.1| Heterogeneous nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 289
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ KLF+ GL+ T+EK L F +G +VEV ++ D+ + +S+G+AF+ + + A A
Sbjct: 6 RPGKLFIGGLNTETTEKALEQYFSKYGGIVEVILMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 244 LKEMNGKIINGWMIVVDVAKTTPKY 268
+EMNGK ++G I V+ A T P++
Sbjct: 66 AREMNGKSLDGKPIKVEQA-TKPQF 89
>gi|56388843|gb|AAH87677.1| Rbm3 protein [Rattus norvegicus]
Length = 148
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKI 251
MNG++
Sbjct: 67 MNGEV 71
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLSF T+E++L AF +G + + +IMD+ + R +G+ F++Y E A A+
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 247 MNGKIINGWMIVVDVA 262
MNG+ ++G I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|414878515|tpg|DAA55646.1| TPA: hypothetical protein ZEAMMB73_431003 [Zea mays]
Length = 113
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV GLS+ T+E L+ F G+++ K+I S +SKG+ F++++++ A AAL++M
Sbjct: 35 LFVGGLSYDTNETALKDVFSQCGDVIAAKVICHPTSGKSKGFGFVKFSSQNQADAALQKM 94
Query: 248 NGKIINGWMIVVDVAKTT 265
NG++++G I V A T
Sbjct: 95 NGQVLDGRKIRVHYANGT 112
>gi|356572088|ref|XP_003554202.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Glycine max]
Length = 336
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+KLFV GL++ T+ +TLRAAF+ GE+ E +I DK++ +S+GY FI + E+ AL+
Sbjct: 66 RKLFVRGLAWNTTSETLRAAFQEHGEIEEGAVIFDKVTGKSRGYGFITFKNMESTQQALR 125
Query: 246 EMNGKIINGWMIVVDVA 262
+ K+I+G + V ++A
Sbjct: 126 APS-KLIDGRLAVCNLA 141
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 173 SDSSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFI 232
S S +S + +KL++ LS + + L F GE+ E + D+ + S+G+ F+
Sbjct: 144 SLSGTSSAPDLSLRKLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFV 203
Query: 233 EYTTEEAASAALKEMNGKIINGWMIVVDVAKT 264
Y T EAA A+ ++ K++ G IVV A +
Sbjct: 204 TYKTAEAAKKAIDDVE-KMLGGRNIVVKYADS 234
>gi|62087996|dbj|BAD92445.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) variant [Homo sapiens]
Length = 278
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G + +V I+ D+ S+RS+G+AF+ + + A A +
Sbjct: 108 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 167
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 168 NGMELDGRRIRVDFSITKRPHTPTPGIYMGRP 199
>gi|440906344|gb|ELR56614.1| U1 small nuclear ribonucleoprotein 70 kDa, partial [Bos grunniens
mutus]
Length = 222
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|21595502|gb|AAM66107.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 343
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%)
Query: 177 EASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTT 236
EA+ + +K+FV GL + T+ +TL FEG+GE+ E +++DK + ++KG+ F+ + T
Sbjct: 95 EAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKT 154
Query: 237 EEAASAALKEMNGKIIN 253
+ A ALKE +I+N
Sbjct: 155 RKGAKEALKEPKKRILN 171
>gi|18399877|ref|NP_565525.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
gi|17380804|gb|AAL36089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20198218|gb|AAD25815.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|21436357|gb|AAM51348.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51970870|dbj|BAD44127.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330252168|gb|AEC07262.1| UBP1 interacting protein 1a [Arabidopsis thaliana]
Length = 343
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%)
Query: 177 EASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTT 236
EA+ + +K+FV GL + T+ +TL FEG+GE+ E +++DK + ++KG+ F+ + T
Sbjct: 95 EAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKT 154
Query: 237 EEAASAALKEMNGKIIN 253
+ A ALKE +I+N
Sbjct: 155 RKGAKEALKEPKKRILN 171
>gi|348510881|ref|XP_003442973.1| PREDICTED: transformer-2 protein homolog beta-like [Oreochromis
niloticus]
Length = 290
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G L +V I+ D+ S+RS+G+AF+ + E + A +
Sbjct: 122 LGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENCEDSKEAKERA 181
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 182 NGMELDGRRIRVDFSITKRAHTPTPGIYMGRP 213
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
++FV LS+ T E+ L F FG++ E+ I +D SK+SKG AFI Y E A AL +
Sbjct: 362 RIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENAVQALND 421
Query: 247 MNGKIINGWMIVVDVAKTTP 266
M+GK+ G +I V K P
Sbjct: 422 MDGKVFQGRLIHVLPGKAAP 441
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 190 VTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNG 249
V L + ++K + FE FG + + KII K +S+ + FI ++TE++A AL +NG
Sbjct: 8 VKQLPKHLTDKRFKEHFEKFGTVTDAKII--KKDGKSRLFGFIGFSTEQSAKNAL-SLNG 64
Query: 250 KIINGWMIVVDVAKTTPKYSRGRP 273
I+ IVV+ A + + RP
Sbjct: 65 TFIDTSKIVVETATVASETTENRP 88
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAAL 244
+ K+ + L F ++ K +R F +GE+ V+I K + +G+ F+E+ TEE A A+
Sbjct: 794 SSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRI-PKKPNGGHRGFGFVEFLTEEEAKNAM 852
Query: 245 KEMNGKIINGWMIVVDVA 262
+ + G +V+ A
Sbjct: 853 EALGNSHFYGRHLVLQYA 870
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 185 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSK-----GYAFIEYTTEEA 239
T+ +++ L++ T+ +TL F+ + V V I K G+ FIE+++++
Sbjct: 677 TQFVYIKNLNWKTTNETLVGKFKSLKDYVNVNIATKANPKNPSERLPCGFGFIEFSSKQG 736
Query: 240 ASAALKEMNGKIINGWMIVVDVA 262
A +K++NG I+G+ I + ++
Sbjct: 737 AYECIKKLNGSSIDGYEISLKLS 759
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L++ TSE ++ FE +G + V+++ DK + + +GYAFIEY A K
Sbjct: 139 KTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYK 198
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ ++ ++VDV +T P + RPR
Sbjct: 199 QADGRKVDNRRVLVDVERGRTVPNW---RPR 226
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L++ TSE ++ FE +G + V+++ DK + + +GYAFIEY A K
Sbjct: 139 KTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYK 198
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ ++ ++VDV +T P + RPR
Sbjct: 199 QADGRKVDNRRVLVDVERGRTVPNW---RPR 226
>gi|383408703|gb|AFH27565.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T+++TL F FG + E ++ D+ + RS+G+ F+ + T+ A A++
Sbjct: 3 KLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQR 62
Query: 247 MNGKIINGWMIVVDVAKTT 265
MN +G +I VD A+ +
Sbjct: 63 MNNTQFDGRLIRVDHAQDS 81
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS T+E+ LR AF +G + + ++ D S RS+G+AF+ Y +EE A A
Sbjct: 117 LGVFGLSLSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFLSYESEEDAREAKDRT 176
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG I+G I VD + T TP GRP
Sbjct: 177 NGMEIDGRRIRVDYSITKRAHTPTPGIYMGRP 208
>gi|242034815|ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
gi|241918656|gb|EER91800.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
Length = 486
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV L++ TSE+ ++ FEG+G + V+++ +K + + +GYAFIEY +A K
Sbjct: 138 KTLFVARLNYETSEQRIKREFEGYGPIKWVRLVTEKDTSKPRGYAFIEYVHTRDMKSAYK 197
Query: 246 EMNGKIINGWMIVVDV--AKTTPKYSRGRPR 274
+ +G+ ++ ++VDV +T P + RPR
Sbjct: 198 QADGRKVDNKRVLVDVERGRTVPNW---RPR 225
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 53/78 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ TS+K L AF +GE++E KII D+ + RS+G+ F+ + E++ A++
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG+ ++G I V+ A++
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|125577795|gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japonica Group]
Length = 481
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 175 SSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEY 234
S+ SP +TKK+FV GL+ +E R FE FG + +V ++ D ++R +G+ FI Y
Sbjct: 109 SAHGSPGPSRTKKIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITY 168
Query: 235 TTEEAASAAL----KEMNGKIINGWMIVVDVAKTTPK 267
+E+A AL E+NGK+ V+V + PK
Sbjct: 169 DSEDAVDKALFKTFHELNGKM-------VEVKRAVPK 198
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
+ KLF+ G+S+ T+E LR F+ +GE+VE I+ D+ + R++G+ FI + A
Sbjct: 2 EADAGKLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 61
Query: 242 AALKEMNGKIINGWMI------------VVDVAKTTPK 267
+ E + +I+G MI VV+ K P+
Sbjct: 62 RVIMEKH--MIDGRMIHDDDDGVLDPSMVVEAKKAVPR 97
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 53/78 (67%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ TS+K L AF +GE++E KII D+ + RS+G+ F+ + E++ A++
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 247 MNGKIINGWMIVVDVAKT 264
MNG+ ++G I V+ A++
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|410340663|gb|JAA39278.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 428
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|380015375|ref|XP_003691678.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Apis florea]
Length = 293
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+ ++V GL+ EK L AAF FGE+V+V+I +D S++ +G+AFIE+ + E A+AA+
Sbjct: 7 RTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAID 66
Query: 246 EMNGKIINGWMIVVDVAK 263
MN + G I V++AK
Sbjct: 67 NMNDSELFGRTIRVNIAK 84
>gi|350410727|ref|XP_003489121.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus impatiens]
Length = 361
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
+ ++V GL+ EK L AAF FGE+V+V+I +D S++ +G+AFIE+ + E A+AA+
Sbjct: 75 RTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAID 134
Query: 246 EMNGKIINGWMIVVDVAK 263
MN + G I V++AK
Sbjct: 135 NMNDSELFGRTIRVNIAK 152
>gi|301765009|ref|XP_002917959.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Ailuropoda melanoleuca]
Length = 476
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|298712969|emb|CBJ26871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 319
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LF+ +S+ T+EK LR FE FG + ++++ D+ K +GYAF+EY E+ A K
Sbjct: 121 KTLFIAKISYDTTEKKLRREFEQFGRIQSIRMVQDEDGK-PRGYAFVEYENEDDMRVAYK 179
Query: 246 EMNGKIINGWMIVVDVAK 263
+G+ I+G ++VDV +
Sbjct: 180 RGDGRKIDGRRVLVDVER 197
>gi|225734047|pdb|3CW1|K Chain K, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734056|pdb|3CW1|6 Chain 6, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734065|pdb|3CW1|7 Chain 7, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734074|pdb|3CW1|8 Chain 8, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 216
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 186 KKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALK 245
K LFV +++ T+E LR FE +G + + ++ K S + +GYAFIEY E +A K
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 246 EMNGKIINGWMIVVDVAK 263
+GK I+G ++VDV +
Sbjct: 163 HADGKKIDGRRVLVDVER 180
>gi|374373120|ref|ZP_09630780.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373234093|gb|EHP53886.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 88
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 49/76 (64%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
++V+ L F+ S+ LR F FG++ K+IMD+ + +S+G+ F+E + A+ A+KE+
Sbjct: 3 MYVSNLGFHASDDDLRELFSSFGQVSSAKVIMDRTTGKSRGFGFVEMGSVSDATLAMKEL 62
Query: 248 NGKIINGWMIVVDVAK 263
+GK ++G I V AK
Sbjct: 63 DGKDVDGRRIAVSAAK 78
>gi|326494758|dbj|BAJ94498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 494
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 175 SSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEY 234
SS SP ++T+K+FV GL+ +E R FE FG + +V ++ D ++R +G+ FI Y
Sbjct: 118 SSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITY 177
Query: 235 TTEEAASAAL----KEMNGKIINGWMIVVDVAKTTPK 267
+E+A AL E+NGK+ V+V + PK
Sbjct: 178 DSEDAVDKALHKNFHELNGKM-------VEVKRAVPK 207
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
+ + KLFV G+S+ T E LR F FGE+ E I+ D+ + R++G+ FI + EA
Sbjct: 25 EADSGKLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFA--EAGV 82
Query: 242 AALKEMNGKIINGWMIVVDVAKTTPK 267
A M+ +I+G M V+ K P+
Sbjct: 83 AERVTMDKHMIDGRM--VEAKKAVPR 106
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 10/96 (10%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
LFV G+S+ T+EK L+ F+ +G + V++I D+ K +GY FIE+ + A K
Sbjct: 100 LFVAGISYDTTEKKLKREFDQYGSIKRVRLIYDRNGK-PRGYGFIEFENDRDMKEAYKNA 158
Query: 248 NGKIINGWMIVVDV--AKTTPKY-------SRGRPR 274
+GK I+G ++VDV A+T P + RG+PR
Sbjct: 159 DGKKIDGRRVLVDVERARTVPGWLPRRLGGGRGKPR 194
>gi|189055016|dbj|BAG38000.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G + +V I+ D+ S+RS+G+AF+ + + A A +
Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 180 NGMELDGRRIRVDFSITKRPHTPTPGIYMGRP 211
>gi|260787130|ref|XP_002588608.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
gi|229273773|gb|EEN44619.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
Length = 130
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GLS+ TSE +L AF FG + E K+I D + RS+G+ F++++ A A K+
Sbjct: 1 KLFVVGLSWGTSEASLCQAFSRFGTVTECKVIRDHWTGRSRGFGFVKFSAPSEADVARKD 60
Query: 247 MNGKIINGWMIVVDVAK 263
M+ + ++G I VD AK
Sbjct: 61 MHFQHLDGRTIRVDYAK 77
>gi|427776715|gb|JAA53809.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 263
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
K+FV GL ++T++K+LR FE FG++ E +I D+ + +S+GY F+ +AA A+KE
Sbjct: 15 KIFVGGLPYHTTDKSLRQFFESFGDIEEAVVITDRQTGKSRGYGFVTMVDRDAAERAVKE 74
Query: 247 MNGKIINGWMIVVDVAKTTPKYSRGRPR 274
N II+G V++A Y +PR
Sbjct: 75 AN-PIIDGRKANVNLA-----YLGAKPR 96
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLF+ GL+++T ++ LR FE FG++ E ++ D+ + RS+G+ F+ Y + A AA++
Sbjct: 3 KLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQA 62
Query: 247 MNGKIINGWMIVVDVA 262
+N + +G I VD A
Sbjct: 63 LNNEEFDGRRIRVDKA 78
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 54/77 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T+++ L+ F FG++++ KII D+ S RS+G+ F+ + E+A A++E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK ++G +I V+ A+
Sbjct: 67 MNGKELDGRVITVNEAQ 83
>gi|53714011|ref|YP_100003.1| RNA-binding protein [Bacteroides fragilis YCH46]
gi|60682207|ref|YP_212351.1| RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|265764361|ref|ZP_06092929.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336410386|ref|ZP_08590866.1| hypothetical protein HMPREF1018_02883 [Bacteroides sp. 2_1_56FAA]
gi|375359004|ref|YP_005111776.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|423250510|ref|ZP_17231526.1| hypothetical protein HMPREF1066_02536 [Bacteroides fragilis
CL03T00C08]
gi|423256011|ref|ZP_17236940.1| hypothetical protein HMPREF1067_03584 [Bacteroides fragilis
CL03T12C07]
gi|423271876|ref|ZP_17250846.1| hypothetical protein HMPREF1079_03928 [Bacteroides fragilis
CL05T00C42]
gi|423276340|ref|ZP_17255281.1| hypothetical protein HMPREF1080_03934 [Bacteroides fragilis
CL05T12C13]
gi|423283895|ref|ZP_17262779.1| hypothetical protein HMPREF1204_02317 [Bacteroides fragilis HMW
615]
gi|52216876|dbj|BAD49469.1| putative RNA-binding protein [Bacteroides fragilis YCH46]
gi|60493641|emb|CAH08430.1| putative RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|263256969|gb|EEZ28315.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301163685|emb|CBW23239.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|335945442|gb|EGN07255.1| hypothetical protein HMPREF1018_02883 [Bacteroides sp. 2_1_56FAA]
gi|392650093|gb|EIY43765.1| hypothetical protein HMPREF1067_03584 [Bacteroides fragilis
CL03T12C07]
gi|392652819|gb|EIY46477.1| hypothetical protein HMPREF1066_02536 [Bacteroides fragilis
CL03T00C08]
gi|392696732|gb|EIY89924.1| hypothetical protein HMPREF1079_03928 [Bacteroides fragilis
CL05T00C42]
gi|392697381|gb|EIY90566.1| hypothetical protein HMPREF1080_03934 [Bacteroides fragilis
CL05T12C13]
gi|404580441|gb|EKA85150.1| hypothetical protein HMPREF1204_02317 [Bacteroides fragilis HMW
615]
Length = 122
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+F+ G+S+ S L FE FGE++ KI+MD+ + RSKG+ F+E +E +AA+ +
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
Query: 248 NGKIINGWMIVVDVAK 263
N K I+G + V VA+
Sbjct: 63 NEKEIDGKTLAVSVAR 78
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 54/77 (70%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
+ FV GL++ T+++ L+ F FG++++ KII D+ S RS+G+ F+ + E+A A++E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 247 MNGKIINGWMIVVDVAK 263
MNGK ++G +I V+ A+
Sbjct: 67 MNGKELDGRVITVNEAQ 83
>gi|423256816|ref|ZP_17237739.1| hypothetical protein HMPREF1055_00016 [Bacteroides fragilis
CL07T00C01]
gi|423266219|ref|ZP_17245222.1| hypothetical protein HMPREF1056_02909 [Bacteroides fragilis
CL07T12C05]
gi|387778292|gb|EIK40387.1| hypothetical protein HMPREF1055_00016 [Bacteroides fragilis
CL07T00C01]
gi|392701574|gb|EIY94732.1| hypothetical protein HMPREF1056_02909 [Bacteroides fragilis
CL07T12C05]
Length = 118
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
+F+ G+S+ S L FE FGE++ KI+MD+ + RSKG+ F+E +E +AA+ +
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
Query: 248 NGKIINGWMIVVDVAK 263
N K I+G + V VA+
Sbjct: 63 NEKEIDGKTLAVSVAR 78
>gi|326525423|dbj|BAJ88758.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 175 SSEASPTQIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEY 234
SS SP ++T+K+FV GL+ +E R FE FG + +V ++ D ++R +G+ FI Y
Sbjct: 95 SSIGSPGPVRTRKIFVGGLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITY 154
Query: 235 TTEEAASAAL----KEMNGKIINGWMIVVDVAKTTPK 267
+E+A AL E+NGK+ V+V + PK
Sbjct: 155 DSEDAVDKALHKNFHELNGKM-------VEVKRAVPK 184
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 182 QIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAAS 241
+ + KLFV G+S+ T E LR F FGE+ E I+ D+ + R++G+ FI + EA
Sbjct: 2 EADSGKLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFA--EAGV 59
Query: 242 AALKEMNGKIINGWMIVVDVAKTTPK 267
A M+ +I+G M V+ K P+
Sbjct: 60 AERVTMDKHMIDGRM--VEAKKAVPR 83
>gi|148702006|gb|EDL33953.1| mCG116386, isoform CRA_c [Mus musculus]
Length = 90
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 187 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 246
KLFV GL+F T E+ L F FG + EV ++ D+ ++RS+G+ FI +T E AS A++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 247 MNGKIING 254
MNG+ + G
Sbjct: 67 MNGEGVEG 74
>gi|402911185|ref|XP_003918220.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Papio
anubis]
Length = 719
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 184 KTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAA 243
+ +KLFV GL+ T EK L+A F +G ++ V ++ D+ + +S+G+AF+ + + A AA
Sbjct: 6 RPEKLFVGGLNLKTDEKALKAEFVKYGRIINVLLMKDRETNKSRGFAFVTFESPADAEAA 65
Query: 244 LKEMNGKIINGWMIVVDVA 262
+++NGK ++G I V A
Sbjct: 66 ARDLNGKYLDGKAIKVAGA 84
>gi|327267358|ref|XP_003218469.1| PREDICTED: transformer-2 protein homolog beta-like [Anolis
carolinensis]
Length = 297
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 188 LFVTGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEM 247
L V GLS YT+E+ LR F +G + +V I+ D+ S+RS+G+AF+ + + A A +
Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERA 179
Query: 248 NGKIINGWMIVVDVAKT------TPKYSRGRP 273
NG ++G I VD + T TP GRP
Sbjct: 180 NGMELDGRRIRVDFSITKRPHTPTPGIYMGRP 211
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,408,898,395
Number of Sequences: 23463169
Number of extensions: 179011182
Number of successful extensions: 444381
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17529
Number of HSP's successfully gapped in prelim test: 5693
Number of HSP's that attempted gapping in prelim test: 406022
Number of HSP's gapped (non-prelim): 38548
length of query: 274
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 134
effective length of database: 9,074,351,707
effective search space: 1215963128738
effective search space used: 1215963128738
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)