BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024013
(274 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1
Length = 209
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%)
Query: 138 FIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFL 197
+I+G G F+ +Y ++ +P LT+ AG++FG + G+I V I T+ A+ AFL
Sbjct: 11 WIDGLGTWAAIAFMLLYTVATVVFLPGSILTLGAGVVFGVILGSIYVFIGATLGATAAFL 70
Query: 198 IARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKF 257
+ RY AR + K + GN+KF AID+A+G+ G ++V L RLSP+ PF+L NY YG+T+V
Sbjct: 71 VGRYLARGWVAKKIAGNQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYAYGITNVSL 130
Query: 258 VPYVLGRYDYYP 269
YV+G P
Sbjct: 131 KDYVIGSLGMIP 142
>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli
(strain K12) GN=ydjX PE=3 SV=2
Length = 236
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 79/131 (60%)
Query: 132 LTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVA 191
L I G GY+L++ ++ +L +P L ++ G++FG + GT++ I+ T+A
Sbjct: 33 LPHLQTLIRQSGFFGYSLYILLFIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLA 92
Query: 192 ASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYG 251
+S +FL+AR+ R+ +LK V + F AI+K I NG + L RL PL P+++ NY YG
Sbjct: 93 SSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYG 152
Query: 252 LTSVKFVPYVL 262
LT++ F PY L
Sbjct: 153 LTTIAFWPYTL 163
>sp|P67118|Y1528_MYCBO TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb1528c PE=3 SV=1
Length = 252
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 150 FVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILK 209
F+ V+ + + P T++AGLLFGSV G I + T +A +A L+ R + L
Sbjct: 72 FLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQ--LN 129
Query: 210 LVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPY 260
+ + +D+ + E G+ + LRL P++PF+ NY G + V+ + +
Sbjct: 130 SLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
>sp|P67117|Y1491_MYCTU TVP38/TMEM64 family membrane protein Rv1491c/MT1538
OS=Mycobacterium tuberculosis GN=Rv1491c PE=3 SV=1
Length = 252
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 150 FVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILK 209
F+ V+ + + P T++AGLLFGSV G I + T +A +A L+ R + L
Sbjct: 72 FLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQ--LN 129
Query: 210 LVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPY 260
+ + +D+ + E G+ + LRL P++PF+ NY G + V+ + +
Sbjct: 130 SLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180
>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=TVP38 PE=3 SV=1
Length = 383
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 167 LTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGE 226
L+M AG+++G V G I+++ + + +FL+ RY R +L+ NKKF A + + E
Sbjct: 120 LSMLAGMVYGFVHGWILLACASISGSFCSFLVFRYLLHSRAERLMNSNKKFRAFSEILRE 179
Query: 227 N-GFRVVTLLRLSPLLPFSLGN 247
+ ++ LLRL P LP+SL N
Sbjct: 180 DSSLFILVLLRLCP-LPYSLSN 200
>sp|A7EFY0|TVP38_SCLS1 Golgi apparatus membrane protein tvp38 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=tvp38 PE=3 SV=1
Length = 393
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 103 SILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAI 162
+I+A +L +V+V F VY+ QI A L F+ P G+ + ++A + A
Sbjct: 91 AIVAAILNIVLVALF----LVYQHQIFASLAPFAERWRDL-PGGWMI---LWAMTFVAAF 142
Query: 163 PAI-----PLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKF 217
P + +T+ AG ++G G IV+ S ++ +FL +R + +LV +K+F
Sbjct: 143 PPLIGYSSTITI-AGFVYGVPKGWAIVATSTVAGSTCSFLASRTILSTYVHRLVGKDKRF 201
Query: 218 LAIDKAIGENGFRVVTLLRLSPLLPFSLGN 247
A+ + +G +++ ++RL P LP+SL N
Sbjct: 202 EALALTLKHDGIKILCMIRLCP-LPYSLSN 230
>sp|P06568|YTXB_BACSU TVP38/TMEM64 family membrane protein YtxB OS=Bacillus subtilis
(strain 168) GN=ytxB PE=3 SV=1
Length = 213
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 111 LVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMS 170
L V+ G G + + K +N + ++ +G +F+ + ++ P ++++
Sbjct: 10 LAVLAGAGLLYWGNKTYLNVSPKEIRVWVLSFGVFAPLMFIGISIVRPLVLFPVSVISIA 69
Query: 171 AGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGN-KKFLAIDKAIGENGF 229
GL FG + GT+ A++V+F A F+ ++ G+ ++ AI K + +NGF
Sbjct: 70 GGLAFGPLLGTLYTLFGSMCASAVSFFAAGLFSAKK-----NGHYERLEAIQKQMEDNGF 124
Query: 230 RVVTLLRLSPLLPFSLGNYLYGLTSVKFVPY 260
+ LLR+ P + F +Y GL++VK +PY
Sbjct: 125 FYIFLLRILP-INFDFVSYAAGLSNVKALPY 154
>sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tvp38 PE=3 SV=1
Length = 419
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 84/171 (49%), Gaps = 22/171 (12%)
Query: 107 GVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAI- 165
G ++L ++ G G M ++ Q+ +L + E A + L++ V+ ++ P +
Sbjct: 87 GAVILAILLGLGFM--IFTGQVFLWLEPVAETWEQSKLAFFVLWLCVF----FVSFPPLV 140
Query: 166 ---PLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDK 222
AG +FG G ++ + + + ++ +F+++R + + +++E +K+F A+
Sbjct: 141 GWSTFGTVAGFIFGIWKGWLLYATATVLGSTCSFIVSRTVLSKFVNRMMERDKRFAALAL 200
Query: 223 AIGENGFRVVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
+ +G +++ ++RL P LP+S+ N +YGL + P +L
Sbjct: 201 TLKYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLMYGLATAIITPKLL 250
>sp|P76221|YDJZ_ECOLI TVP38/TMEM64 family inner membrane protein YdjZ OS=Escherichia coli
(strain K12) GN=ydjZ PE=1 SV=1
Length = 235
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 138 FIEGYGPAGYALFVAVYAGLEILA-----IPAIPLTMSAGLLFGSVTGTIIVSISGTVAA 192
FI+ YG AL V L IL +PA +T + LFG+ G ++ S A
Sbjct: 55 FIQSYG----ALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGA 110
Query: 193 SVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGL 252
++ F IAR RE + KL G ++D G + + RL P +PF +Y GL
Sbjct: 111 ALCFFIARVMGREVVEKL-TGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGL 169
Query: 253 TSVKF 257
TS++F
Sbjct: 170 TSIRF 174
>sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 171 AGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFR 230
AG +FG G I+ + + + ++ +F+++R + + +++E +K+F A+ + +G +
Sbjct: 148 AGFIFGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207
Query: 231 VVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
++ ++RL P LP+S+ N +YGL + P +L
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLMYGLATALITPKLL 249
>sp|A5DH87|TVP38_PICGU Golgi apparatus membrane protein TVP38 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=TVP38 PE=3 SV=2
Length = 349
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 167 LTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGE 226
L++ AG+++G G +++ + + VAFL+ RYF R + +LV N+KF A + + E
Sbjct: 112 LSLLAGMVYGFPYGWPLLASASVSGSFVAFLVFRYFLRSQGERLVNSNEKFRAFAEILRE 171
Query: 227 N-GFRVVTLLRLSPLLPFSLGN 247
+ ++ L+RL P LP+SL N
Sbjct: 172 DSSLFLLVLIRLCP-LPYSLSN 192
>sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=tvp38 PE=3 SV=1
Length = 410
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 24/176 (13%)
Query: 102 GSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILA 161
GS+LA VL L ++G G++Y I + Q+ G + +F+ ++ G+ ++
Sbjct: 83 GSVLA-VLSLNILG----FGFLY---ITGRVFQWLGPVAEKWEHSVPVFIVMWLGVFFVS 134
Query: 162 IPAI----PLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKF 217
P + +G +FG G ++ + + + + +F+ +R + + +LVE +K+F
Sbjct: 135 FPPLVGWSTFGTVSGFIFGVWKGWLLYASATVLGSICSFIASRTVLSKFVHRLVERDKRF 194
Query: 218 LAIDKAIGENGFRVVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
A+ + +G +++ ++RL P LP+S+ N +YGL + P +L
Sbjct: 195 AALALTLKYDGLKLLCMIRLCP-LPYSICNGAISTFPTVQPLMYGLATAIISPKLL 249
>sp|A2Q9P2|TVP38_ASPNC Golgi apparatus membrane protein tvp38 OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=tvp38 PE=3 SV=2
Length = 415
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 171 AGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFR 230
AG +FG G ++ + + + ++ +F+++R + + +L+E +K+F A+ + +G +
Sbjct: 148 AGYIFGIWKGWLLYASATVLGSTCSFIVSRTILSKFVHRLMERDKRFAALSLTLKYDGLK 207
Query: 231 VVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
++ ++RL P LP+S+ N +YGL + P +L
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVQPLMYGLATALISPKLL 249
>sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3
SV=1
Length = 418
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 171 AGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFR 230
+G ++G G I+ + + + ++ +F+++R + + +++E +K+F A+ + +G +
Sbjct: 148 SGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207
Query: 231 VVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
++ ++RL P LP+S+ N +YGL + P +L
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLMYGLATALITPKLL 249
>sp|A6RIB9|TVP38_BOTFB Golgi apparatus membrane protein tvp38 OS=Botryotinia fuckeliana
(strain B05.10) GN=tvp38 PE=3 SV=1
Length = 392
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 171 AGLLFGSVTGTIIVSISGTVAASV-AFLIARYFARERILKLVEGNKKFLAIDKAIGENGF 229
AG ++G G IV+ S TVA S+ +FL +R + +LV +K+F A+ + +G
Sbjct: 154 AGFVYGVPKGWAIVA-SATVAGSLCSFLASRTILSSYVHRLVGKDKRFEALALTLKHDGI 212
Query: 230 RVVTLLRLSPLLPFSLGN 247
+++ ++RL P LP+SL N
Sbjct: 213 KILCMIRLCP-LPYSLSN 229
>sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 171 AGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFR 230
+G ++G G I+ + + + ++ +F+++R + + +++E +K+F A+ + +G +
Sbjct: 148 SGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207
Query: 231 VVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
++ ++RL P LP+S+ N +YGL + P +L
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLMYGLATALITPKLL 249
>sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1
Length = 418
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 171 AGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFR 230
AG +FG G ++ + + + ++ +F+++R + + +L+E +K+F A+ + +G +
Sbjct: 149 AGYIFGVWKGWLLYASATVLGSTASFIVSRTILSKFVHRLMERDKRFAALALTLKYDGLK 208
Query: 231 VVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
++ ++RL P LP+S+ N YGL + P +L
Sbjct: 209 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLTYGLATAIITPKLL 250
>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1
Length = 381
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 111 LVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPA-GYALFVAVYAGLEILAIPA----I 165
LV+V + + + +L ++E G LFV G +++ P I
Sbjct: 124 LVLVCVLAALCFASLALVRRYLQHLLLWVESLDSLLGVLLFVV---GFIVVSFPCGWGYI 180
Query: 166 PLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAI- 224
L ++AG L+G V G ++ + + +A ++ + + ++ + K A+ + +
Sbjct: 181 VLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVVE 240
Query: 225 GENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLG 263
G +G +VV L RL+P +PF L N ++ +T V Y++
Sbjct: 241 GGSGLKVVALARLTP-IPFGLQNAVFSITDVPLPSYLMA 278
>sp|A7TMU9|TVP38_VANPO Golgi apparatus membrane protein TVP38 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=TVP38 PE=3 SV=1
Length = 319
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 167 LTMSAGLLFG-SVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIG 225
L+ + GL++G S G +I++I + +F + + R KL++ N++F A +
Sbjct: 139 LSTTTGLIYGISFKGWVILAIGAVTGSICSFALFKTILHSRAEKLIQMNRRFAAFASILQ 198
Query: 226 ENG-FRVVTLLRLSPLLPFSLGN 247
EN + ++ LLRL P P+SL N
Sbjct: 199 ENNSYWILALLRLCP-FPYSLTN 220
>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2
Length = 380
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 146 GYALFVAVYAGLEILAIPA----IPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARY 201
G LFV G +++ P I L ++AG L+G V G ++ + + +A ++ +
Sbjct: 159 GVLLFVV---GFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKR 215
Query: 202 FARERILKLVEGNKKFLAIDKAI-GENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPY 260
+ ++ ++K A+ + + G +G +VV L RL+P +PF L N ++ +T + Y
Sbjct: 216 LLTAWVAARIQSSEKLSAVIRVVEGGSGLKVVALARLTP-IPFGLQNAVFSITDLSLPNY 274
Query: 261 VLG 263
++
Sbjct: 275 LMA 277
>sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2
Length = 414
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 171 AGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFR 230
+G +FG G + + + + ++ +F+++R + + +++E +K+F A+ + +G +
Sbjct: 146 SGYIFGVWKGWFLYASATVLGSTCSFVVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 205
Query: 231 VVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
++ ++RL P LP+S+ N +YGL + P +L
Sbjct: 206 LLCMIRLCP-LPYSVCNGAVSTFPTVQPLMYGLATAIVTPKLL 247
>sp|Q759P7|TVP38_ASHGO Golgi apparatus membrane protein TVP38 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=TVP38 PE=3 SV=1
Length = 307
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 167 LTMSAGLLFG-SVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIG 225
L SAGL++G S G +I+S+ + + AF + + R +L+ N KF A+ +
Sbjct: 134 LCTSAGLVYGVSFKGWLIISLGTVLGSIAAFSVFKTVFRSYAERLIRLNDKFEALASILQ 193
Query: 226 E-NGFRVVTLLRLSPLLPFSLGN 247
+ N + ++ LLRL P P+SL N
Sbjct: 194 DHNSYWIIALLRLCP-FPYSLTN 215
>sp|P54449|YQED_BACSU Uncharacterized protein YqeD OS=Bacillus subtilis (strain 168)
GN=yqeD PE=4 SV=1
Length = 208
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 163 PAIPLTMSAGL---LFGSVTGTIIVSISGTVAASVA-FLIARYFARERILKLVEGNKKFL 218
P +P + A L +FG+ G I ++++G++ ++ F +ARY R+ K V+
Sbjct: 51 PIVPFALIAALNGAVFGTANG-IWITLTGSMLGTILLFFLARYSFRDWARKKVQAYPAIQ 109
Query: 219 AIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKF 257
+ + + +N F V L RL P++P + N + GL+ V++
Sbjct: 110 SYEASFNKNAFTAVLLGRLIPVIPSLVMNVICGLSQVRW 148
>sp|P36164|TVP38_YEAST Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TVP38 PE=1 SV=1
Length = 337
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 167 LTMSAGLLFG-SVTGTIIVSISGTVAASVA-FLIARYFARERILKLVEGNKKFLAIDKAI 224
L+ + GL++G S G + +++ G+V S+A F++ + R KLV N++F A+ +
Sbjct: 158 LSTTTGLIYGVSFEGWVTLAL-GSVTGSIASFVVFKTILHSRAEKLVHLNRRFEALASIL 216
Query: 225 GENG-FRVVTLLRLSPLLPFSLGN 247
EN + ++ LLRL P P+SL N
Sbjct: 217 QENNSYWILALLRLCP-FPYSLTN 239
>sp|A7A047|TVP38_YEAS7 Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae
(strain YJM789) GN=TVP38 PE=3 SV=1
Length = 337
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 167 LTMSAGLLFG-SVTGTIIVSISGTVAASVA-FLIARYFARERILKLVEGNKKFLAIDKAI 224
L+ + GL++G S G + +++ G+V S+A F++ + R KLV N++F A+ +
Sbjct: 158 LSTTTGLIYGVSFEGWVTLAL-GSVTGSIASFVVFKTILHSRAEKLVHLNRRFEALASIL 216
Query: 225 GENG-FRVVTLLRLSPLLPFSLGN 247
EN + ++ LLRL P P+SL N
Sbjct: 217 QENNSYWILALLRLCP-FPYSLTN 239
>sp|Q502G2|T41AA_DANRE Transmembrane protein 41A-A OS=Danio rerio GN=tmem41aa PE=2 SV=1
Length = 281
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 149 LFVAVYAGLEILAIPAIP-LTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERI 207
LF + Y + AIP L + AG LFG+ G ++ + TV A++ FL+++ F + I
Sbjct: 89 LFCSAYLYKQAFAIPGSSFLNILAGALFGTWFGLLLTCVLTTVGATLCFLLSQAFGKHHI 148
Query: 208 LKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTS 254
+KL K + K + EN + L P S N+ +TS
Sbjct: 149 VKLFP--DKVAMLQKKVEENRSSLFFFLLFLRFFPMS-PNWFLNMTS 192
>sp|Q6FTI0|TVP38_CANGA Golgi apparatus membrane protein TVP38 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=TVP38 PE=3 SV=1
Length = 323
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 167 LTMSAGLLFG-SVTGTIIVSISGTVAASVA-FLIARYFARERILKLVEGNKKFLAIDKAI 224
L+ S GL++G S G ++++ G+V SVA F + + R KLV NK+F A +
Sbjct: 144 LSTSTGLIYGVSFHGWFVLAL-GSVTGSVASFYVFKNLLHSRAEKLVHMNKRFEAFASIL 202
Query: 225 GE-NGFRVVTLLRLSPLLPFSLGN 247
E N + ++ LLRL P P+SL N
Sbjct: 203 QEDNSYLMLALLRLCP-FPYSLTN 225
>sp|A8NX72|TVP38_COPC7 Golgi apparatus membrane protein TVP38 OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=TVP38 PE=3 SV=1
Length = 294
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 184 VSISGTVAAS-VAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLP 242
++ +G++ S + F++ R+ E+I N+K+ A++ + G ++ L+R+SP P
Sbjct: 113 IAFAGSILGSALVFVVLRFLFTEKIRSWSAQNEKWQALEAVVRSKGLPLIVLIRVSPFPP 172
Query: 243 FSLGNYLYG-LTSVKFVPYV 261
+ N L+ + VK +V
Sbjct: 173 WVYANSLFASIEPVKLWQFV 192
>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum
GN=DDB_G0275543 PE=3 SV=2
Length = 334
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 150 FVAVYAGLEILAIP-AIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERIL 208
F +Y L+ +IP ++ L+ +G LFG G +V T+ A+ ++LI+ Y R +
Sbjct: 162 FGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFVATLGATFSYLISYYIGRNLVR 221
Query: 209 KLVEGNKKFLAIDKAIG-ENGFRVVTLLRLSPLLPFSLGNYLYGLTS 254
KL K + + +N + LR++P LP N+ L S
Sbjct: 222 KLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLP----NWFINLAS 264
>sp|P67116|Y641_MYCBO TVP38/TMEM64 family membrane protein Mb0641c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb0641c PE=3 SV=1
Length = 246
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 108 VLLLVVVGGFGTMGYVY----KDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIP 163
++ LVV GF +G Y D I+ + G + GPA +V V A L L +P
Sbjct: 16 IVRLVVFAGF-LVGMFYLVAATDVID--VAAVRGAVSATGPAAPLTYVVVSAVLGALFVP 72
Query: 164 AIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKA 223
L S+GLLFG + G + V++ TV +V + A + + G ++ D
Sbjct: 73 GPILAASSGLLFGPLVG-VFVTLGATVGTAVVASLVGRRAGRASARALLGGERADRTDAL 131
Query: 224 IGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRY 265
I G V R P + + +Y +G V +G +
Sbjct: 132 IERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAF 173
>sp|P67115|Y625_MYCTU TVP38/TMEM64 family membrane protein Rv0625c/MT0653
OS=Mycobacterium tuberculosis GN=Rv0625c PE=3 SV=1
Length = 246
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 108 VLLLVVVGGFGTMGYVY----KDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIP 163
++ LVV GF +G Y D I+ + G + GPA +V V A L L +P
Sbjct: 16 IVRLVVFAGF-LVGMFYLVAATDVID--VAAVRGAVSATGPAAPLTYVVVSAVLGALFVP 72
Query: 164 AIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKA 223
L S+GLLFG + G + V++ TV +V + A + + G ++ D
Sbjct: 73 GPILAASSGLLFGPLVG-VFVTLGATVGTAVVASLVGRRAGRASARALLGGERADRTDAL 131
Query: 224 IGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRY 265
I G V R P + + +Y +G V +G +
Sbjct: 132 IERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAF 173
>sp|P95211|MMPL1_MYCTU Putative membrane protein mmpL1 OS=Mycobacterium tuberculosis
GN=mmpL1 PE=3 SV=2
Length = 958
Score = 35.4 bits (80), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 141 GYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAAS---VAFL 197
Y AL + + GLE+LA+ I T + L G T T+ V ++ T+AAS + FL
Sbjct: 211 AYRSLSAALIMLLTVGLELLAVRGIISTFAVNDLMGLSTFTVNVLVALTIAASTDYIIFL 270
Query: 198 IARY 201
+ RY
Sbjct: 271 VGRY 274
>sp|O07559|YHJE_BACSU Uncharacterized membrane protein YhjE OS=Bacillus subtilis (strain
168) GN=yhjE PE=4 SV=1
Length = 207
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 120 MGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVT 179
+ Y+ ++ + + F GP L + A L L P I ++ FG
Sbjct: 6 LSYLTQEHLTELFQSYRAF----GPLIAVLLPLIEAFLPFL--PLIVFVVANTNSFGLWE 59
Query: 180 GTIIVSISGTVAASV-AFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLS 238
G I+S +G+ A S+ FLI R + + ++L + + + + +GF + LL
Sbjct: 60 G-FILSWAGSTAGSILVFLIVRQYGQRKLLGFIRSHPSVRKLMLWVERHGFGPMFLLLCF 118
Query: 239 PLLPFSLGNYLYGLTSVKFVPYVLG 263
P P + N + GL+ + P++L
Sbjct: 119 PFTPSAAVNVVAGLSRIGTRPFILA 143
>sp|P73471|PUR7_SYNY3 Phosphoribosylaminoimidazole-succinocarboxamide synthase
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=purC
PE=3 SV=1
Length = 264
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 123 VYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIP 163
++KD AF Q G I+G G A+ A++ LE L IP
Sbjct: 40 IFKDDATAFNAQKKGQIQGKGAINCAISAALFRWLETLGIP 80
>sp|Q5DRA2|PCDGM_PANTR Protocadherin gamma-C5 OS=Pan troglodytes GN=PCDHGC5 PE=3 SV=1
Length = 944
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 50/180 (27%)
Query: 4 LVLRP---QYHCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPCSSLKQT----------KK 50
+ LRP Q HC++ +CF +S+ F F++P S + T +
Sbjct: 762 VTLRPTDSQSHCYR--TCFSPASDG--------SDFTFLRPLSVQQPTALALEPDAIRSR 811
Query: 51 QNTLQKSTTNAPRSLGWFF----------NPKGDDDDN--NNR-----IQGNGMDAESEG 93
NTL++ + AP + W F + GDD NN+ +Q + + SE
Sbjct: 812 SNTLRERSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEA 871
Query: 94 LEGDTAVKGSILAGVL-LLVVVGGFGTMGYV--YKDQI-----NAFLTQFSGFIEGYGPA 145
+G + + G AG + L G T+ +V Y+ + NA LT +G +G PA
Sbjct: 872 ADGSSTLGGG--AGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPA 929
>sp|Q9Y5F6|PCDGM_HUMAN Protocadherin gamma-C5 OS=Homo sapiens GN=PCDHGC5 PE=2 SV=1
Length = 944
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 50/180 (27%)
Query: 4 LVLRP---QYHCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPCSSLKQT----------KK 50
+ LRP Q HC++ +CF +S+ F F++P S + T +
Sbjct: 762 VTLRPTDSQSHCYR--TCFSPASDG--------SDFTFLRPLSVQQPTALALEPDAIRSR 811
Query: 51 QNTLQKSTTNAPRSLGWFF----------NPKGDDDDN--NNR-----IQGNGMDAESEG 93
NTL++ + AP + W F + GDD NN+ +Q + + SE
Sbjct: 812 SNTLRERSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEA 871
Query: 94 LEGDTAVKGSILAGVL-LLVVVGGFGTMGYV--YKDQI-----NAFLTQFSGFIEGYGPA 145
+G + + G AG + L G T+ +V Y+ + NA LT +G +G PA
Sbjct: 872 ADGSSTLGGG--AGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPA 929
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,022,567
Number of Sequences: 539616
Number of extensions: 4303725
Number of successful extensions: 12052
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 12010
Number of HSP's gapped (non-prelim): 57
length of query: 274
length of database: 191,569,459
effective HSP length: 116
effective length of query: 158
effective length of database: 128,974,003
effective search space: 20377892474
effective search space used: 20377892474
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)