Query 024016
Match_columns 274
No_of_seqs 279 out of 2208
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 16:44:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024016.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024016hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tri_A Pyrroline-5-carboxylate 100.0 6.3E-52 2.1E-56 354.1 31.1 265 8-274 1-269 (280)
2 3gt0_A Pyrroline-5-carboxylate 100.0 1.6E-45 5.3E-50 309.5 24.4 244 10-254 2-247 (247)
3 2izz_A Pyrroline-5-carboxylate 100.0 2.3E-43 7.9E-48 307.1 30.6 269 5-274 17-291 (322)
4 2ahr_A Putative pyrroline carb 100.0 9.6E-41 3.3E-45 282.2 30.6 256 9-273 2-259 (259)
5 2rcy_A Pyrroline carboxylate r 100.0 8.5E-41 2.9E-45 282.9 30.0 259 8-274 2-261 (262)
6 1yqg_A Pyrroline-5-carboxylate 100.0 1.4E-39 4.8E-44 275.6 30.4 255 11-274 1-259 (263)
7 2f1k_A Prephenate dehydrogenas 100.0 2.2E-33 7.4E-38 239.5 20.1 251 11-274 1-274 (279)
8 3b1f_A Putative prephenate deh 100.0 4.5E-31 1.6E-35 226.4 16.5 253 8-273 4-285 (290)
9 3ggo_A Prephenate dehydrogenas 100.0 9.1E-31 3.1E-35 226.5 18.1 253 10-272 33-308 (314)
10 3c24_A Putative oxidoreductase 100.0 2.2E-30 7.5E-35 221.7 18.6 240 10-260 11-272 (286)
11 2g5c_A Prephenate dehydrogenas 100.0 6.6E-30 2.3E-34 218.2 14.2 252 11-272 2-276 (281)
12 2pv7_A T-protein [includes: ch 100.0 4.9E-29 1.7E-33 214.5 19.5 235 10-273 21-273 (298)
13 3obb_A Probable 3-hydroxyisobu 100.0 6.9E-29 2.4E-33 213.1 19.4 252 10-273 3-280 (300)
14 3ktd_A Prephenate dehydrogenas 100.0 1.7E-29 5.7E-34 219.9 14.5 246 10-271 8-285 (341)
15 4gbj_A 6-phosphogluconate dehy 100.0 7E-27 2.4E-31 200.6 19.2 249 11-274 6-276 (297)
16 3fr7_A Putative ketol-acid red 99.9 8.5E-27 2.9E-31 207.0 15.9 218 9-238 52-307 (525)
17 3l6d_A Putative oxidoreductase 99.9 3.1E-25 1E-29 191.5 25.2 252 4-274 3-280 (306)
18 3g0o_A 3-hydroxyisobutyrate de 99.9 6.9E-25 2.4E-29 189.1 21.9 251 9-274 6-280 (303)
19 3doj_A AT3G25530, dehydrogenas 99.9 7.7E-25 2.6E-29 189.3 22.1 251 7-273 18-291 (310)
20 1np3_A Ketol-acid reductoisome 99.9 1.8E-25 6.1E-30 195.3 16.8 220 9-240 15-264 (338)
21 2uyy_A N-PAC protein; long-cha 99.9 5.4E-25 1.8E-29 190.8 19.7 251 9-274 29-301 (316)
22 3pdu_A 3-hydroxyisobutyrate de 99.9 4.5E-25 1.5E-29 188.8 19.0 248 11-274 2-272 (287)
23 1yb4_A Tartronic semialdehyde 99.9 1.3E-25 4.3E-30 192.8 14.8 251 9-274 2-273 (295)
24 1vpd_A Tartronate semialdehyde 99.9 3.8E-25 1.3E-29 190.2 17.2 250 11-274 6-276 (299)
25 2i76_A Hypothetical protein; N 99.9 3.6E-25 1.2E-29 188.4 15.7 231 10-263 2-250 (276)
26 2h78_A Hibadh, 3-hydroxyisobut 99.9 5.8E-25 2E-29 189.4 16.4 253 9-273 2-280 (302)
27 3pef_A 6-phosphogluconate dehy 99.9 3.5E-24 1.2E-28 183.3 20.9 247 11-273 2-271 (287)
28 2cvz_A Dehydrogenase, 3-hydrox 99.9 4.4E-25 1.5E-29 188.8 14.6 246 11-273 2-266 (289)
29 4dll_A 2-hydroxy-3-oxopropiona 99.9 4.1E-24 1.4E-28 185.5 19.7 248 9-273 30-299 (320)
30 3cky_A 2-hydroxymethyl glutara 99.9 1.6E-24 5.6E-29 186.4 15.8 251 9-274 3-276 (301)
31 3d1l_A Putative NADP oxidoredu 99.9 3.3E-24 1.1E-28 181.4 17.4 206 4-221 4-220 (266)
32 3qsg_A NAD-binding phosphogluc 99.9 8.4E-24 2.9E-28 182.9 19.1 247 9-273 23-288 (312)
33 3qha_A Putative oxidoreductase 99.9 4E-24 1.4E-28 183.6 15.7 244 10-273 15-289 (296)
34 1i36_A Conserved hypothetical 99.9 1.6E-23 5.4E-28 177.0 17.9 239 11-274 1-253 (264)
35 2ew2_A 2-dehydropantoate 2-red 99.9 2.8E-22 9.5E-27 173.3 20.7 252 9-270 2-309 (316)
36 2dpo_A L-gulonate 3-dehydrogen 99.9 9E-22 3.1E-26 170.0 23.6 196 8-216 4-229 (319)
37 2gf2_A Hibadh, 3-hydroxyisobut 99.9 6.3E-23 2.1E-27 176.1 14.7 249 11-273 1-277 (296)
38 3k96_A Glycerol-3-phosphate de 99.9 6.3E-21 2.2E-25 167.3 25.9 252 9-267 28-335 (356)
39 2zyd_A 6-phosphogluconate dehy 99.9 1E-21 3.4E-26 178.8 20.6 196 7-213 12-233 (480)
40 4e12_A Diketoreductase; oxidor 99.9 3.7E-21 1.3E-25 164.1 22.6 196 8-215 2-226 (283)
41 4e21_A 6-phosphogluconate dehy 99.9 1.6E-21 5.3E-26 171.1 20.0 200 4-213 16-271 (358)
42 4huj_A Uncharacterized protein 99.9 4.3E-22 1.5E-26 163.8 15.1 153 8-169 21-198 (220)
43 1z82_A Glycerol-3-phosphate de 99.9 3.5E-21 1.2E-25 168.1 20.9 249 10-272 14-315 (335)
44 2qyt_A 2-dehydropantoate 2-red 99.9 9.7E-22 3.3E-26 170.1 15.1 242 11-267 9-311 (317)
45 2p4q_A 6-phosphogluconate dehy 99.9 8.8E-21 3E-25 173.0 21.7 193 10-213 10-228 (497)
46 1f0y_A HCDH, L-3-hydroxyacyl-C 99.9 4.3E-20 1.5E-24 158.9 23.5 191 10-213 15-238 (302)
47 4ezb_A Uncharacterized conserv 99.9 1.4E-20 4.8E-25 162.9 19.4 241 10-273 24-294 (317)
48 4gwg_A 6-phosphogluconate dehy 99.9 5.9E-20 2E-24 166.3 22.7 194 9-212 3-222 (484)
49 1zej_A HBD-9, 3-hydroxyacyl-CO 99.9 5.2E-20 1.8E-24 156.8 20.7 186 10-215 12-208 (293)
50 2iz1_A 6-phosphogluconate dehy 99.9 4.1E-20 1.4E-24 168.2 21.4 195 8-213 3-224 (474)
51 3dtt_A NADP oxidoreductase; st 99.9 1.3E-20 4.5E-25 157.4 15.7 156 7-170 16-214 (245)
52 1evy_A Glycerol-3-phosphate de 99.8 4.9E-19 1.7E-23 156.3 23.8 152 11-168 16-197 (366)
53 2pgd_A 6-phosphogluconate dehy 99.8 2.5E-19 8.4E-24 163.4 21.8 191 11-212 3-220 (482)
54 1ks9_A KPA reductase;, 2-dehyd 99.8 2.2E-20 7.4E-25 159.6 13.5 247 11-270 1-288 (291)
55 3hn2_A 2-dehydropantoate 2-red 99.8 3.2E-19 1.1E-23 154.2 20.5 244 11-269 3-301 (312)
56 1jay_A Coenzyme F420H2:NADP+ o 99.8 4.7E-20 1.6E-24 150.6 14.0 167 11-188 1-198 (212)
57 1x0v_A GPD-C, GPDH-C, glycerol 99.8 7E-19 2.4E-23 154.6 22.1 155 9-169 7-197 (354)
58 3mog_A Probable 3-hydroxybutyr 99.8 3.2E-19 1.1E-23 162.1 20.4 190 9-213 4-222 (483)
59 3k6j_A Protein F01G10.3, confi 99.8 1.8E-18 6E-23 155.4 24.5 189 9-212 53-267 (460)
60 1yj8_A Glycerol-3-phosphate de 99.8 7.8E-19 2.7E-23 155.5 21.7 154 10-168 21-213 (375)
61 1txg_A Glycerol-3-phosphate de 99.8 6.5E-19 2.2E-23 153.5 18.7 149 11-166 1-177 (335)
62 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.8 6.8E-19 2.3E-23 160.2 19.3 191 11-212 2-221 (478)
63 2yjz_A Metalloreductase steap4 99.7 2.7E-21 9.2E-26 156.6 0.0 150 9-169 18-182 (201)
64 3ghy_A Ketopantoate reductase 99.8 4.9E-18 1.7E-22 148.1 18.8 168 9-183 2-224 (335)
65 3dfu_A Uncharacterized protein 99.8 7.5E-19 2.6E-23 144.0 12.7 145 10-188 6-152 (232)
66 1wdk_A Fatty oxidation complex 99.8 1.4E-17 4.9E-22 158.1 21.9 188 8-211 312-528 (715)
67 3hwr_A 2-dehydropantoate 2-red 99.8 2.1E-17 7E-22 143.2 20.6 238 10-267 19-308 (318)
68 3i83_A 2-dehydropantoate 2-red 99.8 2.4E-17 8.3E-22 142.8 20.2 164 11-181 3-204 (320)
69 1zcj_A Peroxisomal bifunctiona 99.8 1.1E-16 3.7E-21 145.2 23.0 189 8-212 35-250 (463)
70 2vns_A Metalloreductase steap3 99.8 6.7E-18 2.3E-22 138.2 13.6 151 9-169 27-194 (215)
71 2wtb_A MFP2, fatty acid multif 99.8 1.2E-16 4E-21 152.0 22.2 187 9-211 311-526 (725)
72 3pid_A UDP-glucose 6-dehydroge 99.8 1.5E-16 5.1E-21 141.9 21.5 195 4-212 30-269 (432)
73 3gg2_A Sugar dehydrogenase, UD 99.7 5.3E-17 1.8E-21 146.5 16.6 189 11-212 3-248 (450)
74 2raf_A Putative dinucleotide-b 99.7 3.9E-17 1.3E-21 133.1 14.2 135 9-169 18-176 (209)
75 4a7p_A UDP-glucose dehydrogena 99.7 9.3E-17 3.2E-21 144.4 17.2 190 10-212 8-252 (446)
76 3ego_A Probable 2-dehydropanto 99.7 4.4E-16 1.5E-20 134.1 17.8 164 10-182 2-198 (307)
77 2q3e_A UDP-glucose 6-dehydroge 99.7 5.2E-16 1.8E-20 141.0 16.5 193 9-212 4-257 (467)
78 1mv8_A GMD, GDP-mannose 6-dehy 99.7 4.6E-16 1.6E-20 140.2 15.3 189 11-212 1-246 (436)
79 2o3j_A UDP-glucose 6-dehydroge 99.7 1.1E-15 3.9E-20 139.1 15.6 197 8-212 7-263 (481)
80 2y0c_A BCEC, UDP-glucose dehyd 99.7 1.4E-15 4.9E-20 138.2 15.6 190 9-211 7-257 (478)
81 1bg6_A N-(1-D-carboxylethyl)-L 99.7 4.4E-16 1.5E-20 136.8 11.5 94 8-106 2-110 (359)
82 3ado_A Lambda-crystallin; L-gu 99.7 1.6E-14 5.6E-19 124.0 20.2 152 10-167 6-186 (319)
83 1dlj_A UDP-glucose dehydrogena 99.6 8E-15 2.7E-19 130.7 18.0 192 11-212 1-240 (402)
84 3g79_A NDP-N-acetyl-D-galactos 99.6 3.3E-15 1.1E-19 135.1 15.4 194 9-212 17-271 (478)
85 3g17_A Similar to 2-dehydropan 99.6 7.2E-16 2.5E-20 132.0 8.7 150 10-170 2-161 (294)
86 3ojo_A CAP5O; rossmann fold, c 99.6 1.3E-14 4.4E-19 129.6 16.5 189 10-212 11-251 (431)
87 4fgw_A Glycerol-3-phosphate de 99.5 7E-13 2.4E-17 116.6 17.4 158 11-170 35-234 (391)
88 3ulk_A Ketol-acid reductoisome 99.5 2.2E-11 7.7E-16 106.7 23.2 205 9-224 36-267 (491)
89 3zwc_A Peroxisomal bifunctiona 99.5 2E-11 6.9E-16 115.8 23.8 155 8-169 314-494 (742)
90 1ygy_A PGDH, D-3-phosphoglycer 99.4 1.6E-12 5.4E-17 119.7 11.9 164 6-176 138-325 (529)
91 3c7a_A Octopine dehydrogenase; 99.4 1.1E-12 3.7E-17 117.1 10.0 94 11-109 3-120 (404)
92 2w2k_A D-mandelate dehydrogena 99.3 2.3E-12 7.9E-17 112.5 8.6 108 6-118 159-271 (348)
93 2gcg_A Glyoxylate reductase/hy 99.3 1.7E-12 5.8E-17 112.7 7.1 107 6-118 151-261 (330)
94 1gdh_A D-glycerate dehydrogena 99.3 3.5E-12 1.2E-16 110.1 8.2 106 7-118 143-253 (320)
95 2hk9_A Shikimate dehydrogenase 99.3 2.5E-12 8.5E-17 108.9 7.1 122 8-137 127-250 (275)
96 3vtf_A UDP-glucose 6-dehydroge 99.3 1E-10 3.5E-15 104.4 17.5 197 4-211 15-263 (444)
97 3jtm_A Formate dehydrogenase, 99.3 9.4E-12 3.2E-16 108.4 8.4 108 6-118 160-271 (351)
98 2dbq_A Glyoxylate reductase; D 99.3 5.4E-12 1.8E-16 109.6 6.7 105 7-118 147-255 (334)
99 2nac_A NAD-dependent formate d 99.2 1.5E-11 5.2E-16 108.4 9.0 108 6-118 187-298 (393)
100 2j6i_A Formate dehydrogenase; 99.2 1.5E-11 5.2E-16 107.8 8.7 108 6-118 160-272 (364)
101 3ba1_A HPPR, hydroxyphenylpyru 99.2 5.9E-12 2E-16 109.1 5.9 103 6-118 160-266 (333)
102 4dgs_A Dehydrogenase; structur 99.2 2.1E-11 7.1E-16 105.7 8.9 103 6-118 167-273 (340)
103 2ekl_A D-3-phosphoglycerate de 99.2 1.9E-11 6.4E-16 105.2 8.0 106 6-118 138-247 (313)
104 1mx3_A CTBP1, C-terminal bindi 99.2 1.7E-11 5.7E-16 106.8 7.7 106 7-118 165-274 (347)
105 3gg9_A D-3-phosphoglycerate de 99.2 1.8E-11 6.1E-16 106.7 7.4 107 6-118 156-266 (352)
106 4g2n_A D-isomer specific 2-hyd 99.2 2.8E-11 9.6E-16 105.1 8.1 106 6-118 169-278 (345)
107 1wwk_A Phosphoglycerate dehydr 99.2 2.1E-11 7.2E-16 104.6 7.0 106 6-118 138-247 (307)
108 2d0i_A Dehydrogenase; structur 99.2 1.5E-11 5.2E-16 106.7 6.0 105 6-118 142-250 (333)
109 2g76_A 3-PGDH, D-3-phosphoglyc 99.2 3.7E-11 1.3E-15 104.1 8.2 106 6-118 161-270 (335)
110 4e5n_A Thermostable phosphite 99.2 1.7E-11 5.7E-16 106.2 5.9 106 7-118 142-251 (330)
111 2i99_A MU-crystallin homolog; 99.2 4.4E-11 1.5E-15 103.0 8.0 89 9-105 134-226 (312)
112 3gvx_A Glycerate dehydrogenase 99.2 1.4E-11 4.6E-16 104.6 4.3 101 8-118 120-224 (290)
113 2d5c_A AROE, shikimate 5-dehyd 99.2 6.1E-11 2.1E-15 99.6 7.8 118 8-136 115-236 (263)
114 1hyh_A L-hicdh, L-2-hydroxyiso 99.2 1.9E-10 6.4E-15 98.9 10.9 95 11-110 2-127 (309)
115 2pi1_A D-lactate dehydrogenase 99.1 7.4E-11 2.5E-15 102.2 7.7 105 6-118 137-245 (334)
116 4hy3_A Phosphoglycerate oxidor 99.1 1.7E-10 5.9E-15 100.7 9.8 106 6-118 172-281 (365)
117 1lss_A TRK system potassium up 99.1 6.1E-10 2.1E-14 83.8 11.3 96 9-110 3-107 (140)
118 3u62_A Shikimate dehydrogenase 99.1 2.5E-11 8.4E-16 101.2 3.3 136 9-153 108-246 (253)
119 3d4o_A Dipicolinate synthase s 99.1 4.1E-10 1.4E-14 96.1 10.8 116 7-133 152-272 (293)
120 2rir_A Dipicolinate synthase, 99.1 4.5E-10 1.5E-14 96.2 10.9 94 6-107 153-248 (300)
121 1qp8_A Formate dehydrogenase; 99.1 5.2E-11 1.8E-15 101.9 4.8 101 7-118 121-225 (303)
122 1j4a_A D-LDH, D-lactate dehydr 99.1 1.2E-10 4.3E-15 100.9 7.0 104 7-118 143-250 (333)
123 3evt_A Phosphoglycerate dehydr 99.1 4.4E-11 1.5E-15 103.1 3.6 106 6-118 133-242 (324)
124 2cuk_A Glycerate dehydrogenase 99.1 5.8E-11 2E-15 102.0 4.0 101 6-118 140-244 (311)
125 3oj0_A Glutr, glutamyl-tRNA re 99.1 7.6E-11 2.6E-15 89.8 4.0 88 10-106 21-111 (144)
126 3hg7_A D-isomer specific 2-hyd 99.1 5.5E-11 1.9E-15 102.4 3.5 106 6-118 136-245 (324)
127 3pp8_A Glyoxylate/hydroxypyruv 99.1 2.8E-11 9.5E-16 104.0 1.6 106 6-118 135-244 (315)
128 1y81_A Conserved hypothetical 99.1 3.3E-10 1.1E-14 85.7 7.4 96 9-117 13-112 (138)
129 3uuw_A Putative oxidoreductase 99.0 1.1E-09 3.6E-14 94.1 10.4 89 6-102 2-94 (308)
130 1sc6_A PGDH, D-3-phosphoglycer 99.0 3E-10 1E-14 100.8 7.1 104 6-118 141-248 (404)
131 2g1u_A Hypothetical protein TM 99.0 1E-09 3.4E-14 84.6 9.2 101 4-109 13-122 (155)
132 1lld_A L-lactate dehydrogenase 99.0 2E-09 6.8E-14 92.8 11.6 113 9-125 6-148 (319)
133 2yq5_A D-isomer specific 2-hyd 99.0 2.1E-10 7E-15 99.6 5.3 103 7-118 145-251 (343)
134 3c85_A Putative glutathione-re 99.0 2.4E-09 8.1E-14 84.8 10.6 95 7-107 36-141 (183)
135 2duw_A Putative COA-binding pr 99.0 5.7E-10 1.9E-14 85.1 6.5 95 10-117 13-113 (145)
136 3q2i_A Dehydrogenase; rossmann 99.0 2.2E-09 7.5E-14 93.9 11.0 86 9-102 12-103 (354)
137 3k5p_A D-3-phosphoglycerate de 99.0 4.6E-10 1.6E-14 99.4 6.6 104 6-118 152-259 (416)
138 1dxy_A D-2-hydroxyisocaproate 99.0 5.1E-10 1.7E-14 97.0 6.7 104 6-118 141-248 (333)
139 3oet_A Erythronate-4-phosphate 99.0 3.4E-10 1.2E-14 99.1 5.4 103 6-118 115-225 (381)
140 1a5z_A L-lactate dehydrogenase 99.0 3.3E-09 1.1E-13 91.5 11.6 96 11-110 1-121 (319)
141 3euw_A MYO-inositol dehydrogen 99.0 3.4E-09 1.2E-13 92.3 11.4 79 9-92 3-86 (344)
142 3rc1_A Sugar 3-ketoreductase; 99.0 3.4E-09 1.2E-13 92.6 10.6 90 5-102 22-117 (350)
143 1x7d_A Ornithine cyclodeaminas 98.9 9.2E-10 3.1E-14 96.0 6.6 91 9-105 128-226 (350)
144 1xdw_A NAD+-dependent (R)-2-hy 98.9 6.5E-10 2.2E-14 96.3 5.4 103 7-118 143-249 (331)
145 2o4c_A Erythronate-4-phosphate 98.9 8.6E-10 2.9E-14 96.8 5.9 102 7-118 113-222 (380)
146 3db2_A Putative NADPH-dependen 98.9 5.6E-09 1.9E-13 91.3 10.7 98 9-114 4-107 (354)
147 3llv_A Exopolyphosphatase-rela 98.9 1.2E-08 4E-13 77.2 11.1 100 9-113 5-112 (141)
148 3ic5_A Putative saccharopine d 98.9 4.8E-09 1.6E-13 76.4 8.4 90 10-107 5-102 (118)
149 2ewd_A Lactate dehydrogenase,; 98.9 4.9E-09 1.7E-13 90.4 9.7 96 9-110 3-126 (317)
150 3fwz_A Inner membrane protein 98.9 2.7E-08 9.1E-13 75.2 12.3 92 10-107 7-107 (140)
151 2dc1_A L-aspartate dehydrogena 98.9 1.8E-09 6.3E-14 89.1 6.2 80 11-106 1-82 (236)
152 3e9m_A Oxidoreductase, GFO/IDH 98.9 6.8E-09 2.3E-13 90.0 9.4 80 8-92 3-88 (330)
153 3c1a_A Putative oxidoreductase 98.9 2.9E-09 9.8E-14 91.7 7.0 92 1-102 2-97 (315)
154 4hkt_A Inositol 2-dehydrogenas 98.9 9.3E-09 3.2E-13 89.1 10.3 77 10-92 3-84 (331)
155 2ho3_A Oxidoreductase, GFO/IDH 98.9 5.2E-08 1.8E-12 84.1 14.6 97 11-115 2-104 (325)
156 2v6b_A L-LDH, L-lactate dehydr 98.8 2.9E-08 9.9E-13 85.0 12.3 111 11-125 1-138 (304)
157 3e18_A Oxidoreductase; dehydro 98.8 1.9E-08 6.3E-13 88.2 10.8 87 8-102 3-93 (359)
158 3ezy_A Dehydrogenase; structur 98.8 1.7E-08 5.7E-13 88.0 10.2 97 10-114 2-105 (344)
159 3qy9_A DHPR, dihydrodipicolina 98.8 1.4E-08 4.6E-13 83.9 8.7 90 8-113 1-91 (243)
160 3cea_A MYO-inositol 2-dehydrog 98.8 2.9E-08 9.8E-13 86.4 10.7 88 7-102 5-99 (346)
161 3ec7_A Putative dehydrogenase; 98.8 2.8E-08 9.5E-13 87.0 10.7 88 7-102 20-115 (357)
162 1tlt_A Putative oxidoreductase 98.8 1.9E-08 6.4E-13 86.7 9.4 87 8-102 3-93 (319)
163 3mz0_A Inositol 2-dehydrogenas 98.8 3.2E-08 1.1E-12 86.2 10.8 85 10-102 2-94 (344)
164 1v8b_A Adenosylhomocysteinase; 98.8 2.4E-08 8.3E-13 89.9 10.1 101 7-115 254-357 (479)
165 1xea_A Oxidoreductase, GFO/IDH 98.8 3.8E-08 1.3E-12 84.9 10.9 77 10-91 2-83 (323)
166 3l4b_C TRKA K+ channel protien 98.8 5.9E-08 2E-12 78.9 11.1 92 11-107 1-101 (218)
167 1guz_A Malate dehydrogenase; o 98.8 4.7E-08 1.6E-12 83.9 10.8 92 11-109 1-122 (310)
168 1omo_A Alanine dehydrogenase; 98.7 1.8E-08 6.1E-13 87.0 7.9 87 9-104 124-216 (322)
169 2hjr_A Malate dehydrogenase; m 98.7 4.7E-08 1.6E-12 84.5 10.4 93 11-109 15-135 (328)
170 3d64_A Adenosylhomocysteinase; 98.7 3E-08 1E-12 89.6 9.3 101 7-117 274-378 (494)
171 3p2y_A Alanine dehydrogenase/p 98.7 1.2E-08 4.1E-13 89.2 6.2 92 9-105 183-302 (381)
172 3h9u_A Adenosylhomocysteinase; 98.7 3.9E-08 1.3E-12 87.1 9.4 100 8-115 209-311 (436)
173 3evn_A Oxidoreductase, GFO/IDH 98.7 1.9E-08 6.5E-13 87.1 7.0 88 8-102 3-95 (329)
174 2glx_A 1,5-anhydro-D-fructose 98.7 7.7E-08 2.6E-12 83.2 10.9 84 11-102 1-90 (332)
175 2hmt_A YUAA protein; RCK, KTN, 98.7 2.6E-08 8.8E-13 75.1 6.9 92 10-107 6-106 (144)
176 1ydw_A AX110P-like protein; st 98.7 5.6E-08 1.9E-12 85.2 9.9 89 7-103 3-100 (362)
177 1obb_A Maltase, alpha-glucosid 98.7 1E-07 3.5E-12 86.0 11.5 110 9-125 2-173 (480)
178 1pzg_A LDH, lactate dehydrogen 98.7 1.3E-07 4.3E-12 81.9 11.2 95 10-109 9-136 (331)
179 1h6d_A Precursor form of gluco 98.7 7.7E-08 2.7E-12 86.4 10.1 87 8-102 81-178 (433)
180 1f06_A MESO-diaminopimelate D- 98.7 2E-08 7E-13 86.6 6.0 96 8-113 1-98 (320)
181 3ohs_X Trans-1,2-dihydrobenzen 98.7 1.4E-07 4.7E-12 81.8 10.9 88 10-102 2-94 (334)
182 3hdj_A Probable ornithine cycl 98.7 2.9E-08 1E-12 85.2 6.5 87 9-105 120-213 (313)
183 1u8x_X Maltose-6'-phosphate gl 98.6 8.9E-08 3E-12 86.4 9.5 114 9-125 27-193 (472)
184 2p2s_A Putative oxidoreductase 98.6 1E-07 3.5E-12 82.7 9.6 87 8-102 2-94 (336)
185 2z2v_A Hypothetical protein PH 98.6 3.8E-08 1.3E-12 86.3 6.9 89 9-106 15-109 (365)
186 3m2t_A Probable dehydrogenase; 98.6 5.6E-08 1.9E-12 85.1 7.6 87 8-102 3-96 (359)
187 2zqz_A L-LDH, L-lactate dehydr 98.6 3.1E-07 1.1E-11 79.2 12.2 105 1-110 1-130 (326)
188 3fef_A Putative glucosidase LP 98.6 1.1E-07 3.9E-12 85.1 9.6 114 8-124 3-167 (450)
189 4dio_A NAD(P) transhydrogenase 98.6 4.2E-08 1.4E-12 86.4 6.4 91 10-105 190-312 (405)
190 1id1_A Putative potassium chan 98.6 2.7E-07 9.2E-12 70.6 10.3 96 8-108 1-108 (153)
191 3bio_A Oxidoreductase, GFO/IDH 98.6 8.2E-08 2.8E-12 82.2 8.0 85 8-104 7-95 (304)
192 3ce6_A Adenosylhomocysteinase; 98.6 1.2E-07 4.2E-12 85.8 9.4 90 8-106 272-362 (494)
193 1t2d_A LDH-P, L-lactate dehydr 98.6 2.2E-07 7.6E-12 80.0 10.5 95 9-109 3-130 (322)
194 1ldn_A L-lactate dehydrogenase 98.6 3.7E-07 1.3E-11 78.5 11.5 97 9-109 5-127 (316)
195 3d0o_A L-LDH 1, L-lactate dehy 98.6 6E-07 2.1E-11 77.2 12.5 98 8-109 4-127 (317)
196 3u3x_A Oxidoreductase; structu 98.6 2.8E-07 9.7E-12 80.7 10.5 90 6-102 22-116 (361)
197 1y6j_A L-lactate dehydrogenase 98.6 5.4E-07 1.8E-11 77.5 12.0 113 9-125 6-147 (318)
198 4had_A Probable oxidoreductase 98.6 1.7E-07 5.9E-12 81.6 9.0 81 9-92 22-107 (350)
199 2nvw_A Galactose/lactose metab 98.6 1.8E-07 6.1E-12 85.0 9.3 79 8-91 37-128 (479)
200 1iuk_A Hypothetical protein TT 98.6 4.5E-08 1.6E-12 74.0 4.3 96 10-117 13-113 (140)
201 3pqe_A L-LDH, L-lactate dehydr 98.6 5.7E-07 2E-11 77.5 11.7 97 9-109 4-126 (326)
202 1oju_A MDH, malate dehydrogena 98.6 4.4E-07 1.5E-11 77.1 10.7 94 11-109 1-122 (294)
203 3kb6_A D-lactate dehydrogenase 98.5 1.5E-07 5.3E-12 81.4 7.7 108 8-123 139-250 (334)
204 4gmf_A Yersiniabactin biosynth 98.5 2.1E-07 7.2E-12 81.7 8.3 105 4-117 1-112 (372)
205 3gvi_A Malate dehydrogenase; N 98.5 3.8E-07 1.3E-11 78.5 9.8 99 5-109 2-128 (324)
206 2egg_A AROE, shikimate 5-dehyd 98.5 1.1E-07 3.8E-12 81.0 6.4 95 8-106 139-241 (297)
207 3moi_A Probable dehydrogenase; 98.5 2.6E-07 8.9E-12 81.7 8.8 86 10-102 2-92 (387)
208 3dty_A Oxidoreductase, GFO/IDH 98.5 2.8E-07 9.6E-12 81.8 8.8 89 7-102 9-113 (398)
209 1ez4_A Lactate dehydrogenase; 98.5 1.1E-06 3.8E-11 75.5 12.2 98 9-110 4-126 (318)
210 3p7m_A Malate dehydrogenase; p 98.5 5E-07 1.7E-11 77.7 9.9 98 7-109 2-126 (321)
211 2ixa_A Alpha-N-acetylgalactosa 98.5 7.6E-07 2.6E-11 80.2 11.5 88 7-102 17-119 (444)
212 2d59_A Hypothetical protein PH 98.5 5.1E-07 1.7E-11 68.5 8.8 95 10-117 22-120 (144)
213 3vku_A L-LDH, L-lactate dehydr 98.5 1.3E-06 4.6E-11 75.1 12.1 97 9-109 8-129 (326)
214 4gqa_A NAD binding oxidoreduct 98.5 5.1E-07 1.7E-11 80.4 9.9 91 9-102 25-124 (412)
215 3v5n_A Oxidoreductase; structu 98.5 4.2E-07 1.4E-11 81.2 9.3 88 8-102 35-138 (417)
216 2b0j_A 5,10-methenyltetrahydro 98.5 6E-06 2.1E-10 68.1 15.1 164 57-227 127-302 (358)
217 1zh8_A Oxidoreductase; TM0312, 98.5 8.4E-07 2.9E-11 77.0 10.8 86 9-102 17-110 (340)
218 3n58_A Adenosylhomocysteinase; 98.5 1.1E-06 3.8E-11 77.9 11.5 91 7-107 244-336 (464)
219 3gvp_A Adenosylhomocysteinase 98.5 3.1E-07 1.1E-11 81.2 7.9 90 8-107 218-309 (435)
220 2i6t_A Ubiquitin-conjugating e 98.5 1.1E-06 3.9E-11 74.9 11.1 95 10-109 14-129 (303)
221 3nep_X Malate dehydrogenase; h 98.5 1.2E-06 4.2E-11 75.0 11.3 95 11-109 1-122 (314)
222 3don_A Shikimate dehydrogenase 98.5 7.3E-08 2.5E-12 81.1 3.5 93 9-105 116-210 (277)
223 3kux_A Putative oxidoreductase 98.5 8.7E-07 3E-11 77.3 10.5 84 9-102 6-95 (352)
224 3e82_A Putative oxidoreductase 98.5 1E-06 3.4E-11 77.3 10.9 95 9-114 6-108 (364)
225 4fb5_A Probable oxidoreductase 98.4 7E-07 2.4E-11 78.7 9.6 97 8-108 23-127 (393)
226 2xxj_A L-LDH, L-lactate dehydr 98.4 1.9E-06 6.4E-11 73.8 11.8 95 11-109 1-120 (310)
227 3btv_A Galactose/lactose metab 98.4 3.5E-07 1.2E-11 82.3 7.5 78 9-91 19-109 (438)
228 1ur5_A Malate dehydrogenase; o 98.4 1.3E-06 4.4E-11 74.9 10.6 93 11-109 3-123 (309)
229 4h3v_A Oxidoreductase domain p 98.4 9E-07 3.1E-11 77.9 9.9 94 6-102 2-103 (390)
230 3ldh_A Lactate dehydrogenase; 98.4 2.7E-06 9.4E-11 73.1 11.8 97 9-110 20-143 (330)
231 3gdo_A Uncharacterized oxidore 98.4 1.9E-06 6.7E-11 75.3 10.7 84 9-102 4-93 (358)
232 4f3y_A DHPR, dihydrodipicolina 98.4 3E-07 1E-11 77.1 5.2 102 7-114 4-113 (272)
233 1s6y_A 6-phospho-beta-glucosid 98.4 1E-06 3.5E-11 79.2 9.0 113 10-125 7-174 (450)
234 2vhw_A Alanine dehydrogenase; 98.4 7E-07 2.4E-11 78.6 7.6 93 8-105 166-268 (377)
235 3f4l_A Putative oxidoreductase 98.4 4.8E-07 1.6E-11 78.7 6.5 96 10-114 2-106 (345)
236 3abi_A Putative uncharacterize 98.4 6E-07 2.1E-11 78.8 7.1 88 9-105 15-108 (365)
237 3o8q_A Shikimate 5-dehydrogena 98.4 5.4E-07 1.8E-11 76.1 6.5 92 8-105 124-221 (281)
238 1p77_A Shikimate 5-dehydrogena 98.4 4.4E-07 1.5E-11 76.4 5.7 71 8-84 117-193 (272)
239 1x13_A NAD(P) transhydrogenase 98.3 4.8E-07 1.6E-11 80.3 5.8 87 10-105 172-292 (401)
240 3phh_A Shikimate dehydrogenase 98.3 9.5E-07 3.3E-11 73.9 7.3 90 10-106 118-210 (269)
241 4aj2_A L-lactate dehydrogenase 98.3 4.4E-06 1.5E-10 72.0 11.4 98 7-109 16-140 (331)
242 3tl2_A Malate dehydrogenase; c 98.3 3.8E-06 1.3E-10 72.0 10.8 96 9-109 7-131 (315)
243 1nyt_A Shikimate 5-dehydrogena 98.3 1.8E-06 6.2E-11 72.5 8.6 91 8-105 117-214 (271)
244 2nu8_A Succinyl-COA ligase [AD 98.3 1.3E-06 4.5E-11 74.0 7.7 94 9-112 6-103 (288)
245 3l9w_A Glutathione-regulated p 98.3 4.7E-06 1.6E-10 74.1 11.5 93 9-106 3-103 (413)
246 3fhl_A Putative oxidoreductase 98.3 1.7E-06 5.7E-11 75.8 8.3 85 8-102 3-93 (362)
247 2d4a_B Malate dehydrogenase; a 98.3 2.7E-06 9.1E-11 72.8 9.2 92 12-109 1-120 (308)
248 3pwz_A Shikimate dehydrogenase 98.3 2.7E-06 9.1E-11 71.4 8.5 92 8-105 118-215 (272)
249 2vt3_A REX, redox-sensing tran 98.3 4E-07 1.4E-11 73.7 3.3 80 10-93 85-167 (215)
250 3fi9_A Malate dehydrogenase; s 98.3 5.6E-06 1.9E-10 71.7 10.7 99 7-109 5-130 (343)
251 1l7d_A Nicotinamide nucleotide 98.3 1.5E-06 5E-11 76.8 6.9 92 9-105 171-294 (384)
252 3oqb_A Oxidoreductase; structu 98.2 1.4E-06 4.9E-11 76.7 6.9 102 8-114 4-124 (383)
253 1leh_A Leucine dehydrogenase; 98.2 3.7E-06 1.3E-10 73.4 9.1 70 8-83 171-242 (364)
254 1gpj_A Glutamyl-tRNA reductase 98.2 2.5E-06 8.7E-11 75.8 8.1 70 9-82 166-238 (404)
255 2czc_A Glyceraldehyde-3-phosph 98.2 2.1E-06 7.1E-11 74.4 7.3 86 11-102 3-107 (334)
256 1nvm_B Acetaldehyde dehydrogen 98.2 3E-06 1E-10 72.6 8.1 91 9-104 3-103 (312)
257 2eez_A Alanine dehydrogenase; 98.2 3.3E-06 1.1E-10 74.2 7.9 93 8-105 164-266 (369)
258 2x0j_A Malate dehydrogenase; o 98.2 1.1E-05 3.9E-10 68.2 10.8 96 11-110 1-123 (294)
259 3i23_A Oxidoreductase, GFO/IDH 98.2 4.7E-06 1.6E-10 72.5 8.6 83 10-102 2-93 (349)
260 4ew6_A D-galactose-1-dehydroge 98.2 2.8E-06 9.6E-11 73.4 7.0 93 8-114 23-122 (330)
261 1npy_A Hypothetical shikimate 98.1 6E-06 2.1E-10 69.3 8.2 68 10-83 119-187 (271)
262 1dih_A Dihydrodipicolinate red 98.1 2E-06 6.8E-11 72.3 4.7 99 8-114 3-112 (273)
263 3o9z_A Lipopolysaccaride biosy 98.1 7.4E-06 2.5E-10 70.2 8.3 97 10-115 3-114 (312)
264 3oa2_A WBPB; oxidoreductase, s 98.1 7.9E-06 2.7E-10 70.2 8.2 85 10-102 3-101 (318)
265 1lc0_A Biliverdin reductase A; 98.1 5.2E-06 1.8E-10 70.5 7.0 86 4-102 1-93 (294)
266 3upl_A Oxidoreductase; rossman 98.1 5.7E-06 1.9E-10 73.8 7.4 90 9-104 22-138 (446)
267 1xyg_A Putative N-acetyl-gamma 98.1 1E-05 3.6E-10 70.6 8.9 106 3-118 9-128 (359)
268 3ijp_A DHPR, dihydrodipicolina 98.1 3.9E-06 1.3E-10 70.7 5.9 97 10-113 21-127 (288)
269 1oi7_A Succinyl-COA synthetase 98.0 1E-05 3.5E-10 68.5 7.4 93 9-111 6-102 (288)
270 3mtj_A Homoserine dehydrogenas 98.0 2.3E-05 7.9E-10 70.0 10.0 91 8-104 8-109 (444)
271 1o6z_A MDH, malate dehydrogena 98.0 8.2E-05 2.8E-09 63.4 12.8 95 11-109 1-123 (303)
272 4g65_A TRK system potassium up 98.0 9.9E-06 3.4E-10 73.1 7.3 73 9-86 2-83 (461)
273 3ond_A Adenosylhomocysteinase; 98.0 2.8E-05 9.7E-10 69.9 10.1 90 8-106 263-353 (488)
274 1j5p_A Aspartate dehydrogenase 98.0 6.4E-06 2.2E-10 67.9 5.4 82 9-107 11-93 (253)
275 2axq_A Saccharopine dehydrogen 98.0 9.9E-06 3.4E-10 73.2 6.7 89 8-104 21-118 (467)
276 2nqt_A N-acetyl-gamma-glutamyl 98.0 1.6E-05 5.4E-10 69.2 7.7 145 9-162 8-175 (352)
277 1b7g_O Protein (glyceraldehyde 98.0 2.1E-05 7E-10 68.2 8.3 91 11-107 2-110 (340)
278 2aef_A Calcium-gated potassium 97.9 2.7E-05 9.2E-10 63.7 8.0 88 10-104 9-104 (234)
279 1pjc_A Protein (L-alanine dehy 97.9 1.5E-05 5.1E-10 69.7 6.8 92 9-105 166-267 (361)
280 3ius_A Uncharacterized conserv 97.9 4.7E-05 1.6E-09 63.8 9.6 69 6-80 2-72 (286)
281 1smk_A Malate dehydrogenase, g 97.9 1.3E-05 4.6E-10 69.0 6.2 96 9-110 7-130 (326)
282 1mld_A Malate dehydrogenase; o 97.9 3.5E-05 1.2E-09 66.0 8.6 96 11-110 1-122 (314)
283 1ys4_A Aspartate-semialdehyde 97.9 2E-05 6.8E-10 68.7 7.1 91 10-107 8-116 (354)
284 1cf2_P Protein (glyceraldehyde 97.9 1.2E-05 4.3E-10 69.5 5.7 90 11-106 2-110 (337)
285 3ip3_A Oxidoreductase, putativ 97.9 8.8E-06 3E-10 70.4 4.6 90 10-108 2-100 (337)
286 3fbt_A Chorismate mutase and s 97.9 1.6E-05 5.5E-10 66.9 6.0 92 8-105 120-214 (282)
287 1ff9_A Saccharopine reductase; 97.9 1.6E-05 5.6E-10 71.5 6.2 75 8-87 1-84 (450)
288 1u8f_O GAPDH, glyceraldehyde-3 97.9 7.5E-05 2.6E-09 64.5 10.1 92 10-107 3-124 (335)
289 2yv1_A Succinyl-COA ligase [AD 97.9 2.4E-05 8.1E-10 66.4 6.9 92 10-111 13-108 (294)
290 3jyo_A Quinate/shikimate dehyd 97.9 2.7E-05 9.1E-10 65.7 6.9 94 8-105 125-229 (283)
291 2ozp_A N-acetyl-gamma-glutamyl 97.9 4.3E-05 1.5E-09 66.3 8.3 101 9-118 3-115 (345)
292 2fp4_A Succinyl-COA ligase [GD 97.8 5.2E-05 1.8E-09 64.6 8.5 95 9-112 12-110 (305)
293 2dt5_A AT-rich DNA-binding pro 97.8 3.8E-06 1.3E-10 67.7 1.2 78 10-92 80-161 (211)
294 1p9l_A Dihydrodipicolinate red 97.8 0.00012 4.1E-09 60.3 10.2 81 11-113 1-84 (245)
295 4ina_A Saccharopine dehydrogen 97.8 3.1E-05 1.1E-09 68.8 7.1 89 11-104 2-106 (405)
296 2ejw_A HDH, homoserine dehydro 97.8 8.4E-06 2.9E-10 70.3 3.2 89 9-104 2-97 (332)
297 3ing_A Homoserine dehydrogenas 97.8 2.1E-05 7.3E-10 67.6 5.6 98 7-106 1-118 (325)
298 1b8p_A Protein (malate dehydro 97.8 0.0001 3.5E-09 63.5 9.6 100 9-109 4-137 (329)
299 3hhp_A Malate dehydrogenase; M 97.8 0.00015 5.3E-09 61.9 10.3 95 11-109 1-122 (312)
300 2yyy_A Glyceraldehyde-3-phosph 97.8 0.0001 3.4E-09 63.8 9.1 87 11-103 3-111 (343)
301 2yv2_A Succinyl-COA synthetase 97.7 9.4E-05 3.2E-09 62.8 8.3 92 10-111 13-109 (297)
302 3dfz_A SIRC, precorrin-2 dehyd 97.7 0.00016 5.6E-09 58.5 9.2 95 1-104 20-120 (223)
303 3ff4_A Uncharacterized protein 97.7 3.9E-05 1.3E-09 56.2 4.9 94 10-117 4-101 (122)
304 3keo_A Redox-sensing transcrip 97.7 1E-05 3.6E-10 64.9 1.8 79 10-93 84-170 (212)
305 3qvo_A NMRA family protein; st 97.7 2.4E-05 8.4E-10 63.9 4.0 71 8-83 21-100 (236)
306 3e8x_A Putative NAD-dependent 97.7 0.00014 5E-09 59.1 8.7 68 8-80 19-93 (236)
307 1edz_A 5,10-methylenetetrahydr 97.7 2E-05 6.9E-10 67.2 3.4 93 5-106 172-276 (320)
308 1jw9_B Molybdopterin biosynthe 97.7 0.00011 3.8E-09 60.7 7.5 78 10-91 31-141 (249)
309 1up7_A 6-phospho-beta-glucosid 97.7 0.00038 1.3E-08 61.8 11.3 112 10-125 2-163 (417)
310 2hjs_A USG-1 protein homolog; 97.6 3.2E-05 1.1E-09 67.0 4.3 94 10-108 6-102 (340)
311 3dr3_A N-acetyl-gamma-glutamyl 97.6 8.8E-05 3E-09 64.0 7.0 102 11-118 5-122 (337)
312 3do5_A HOM, homoserine dehydro 97.6 2.6E-05 8.8E-10 67.2 3.5 91 10-104 2-114 (327)
313 3i6i_A Putative leucoanthocyan 97.6 7.6E-05 2.6E-09 64.5 6.5 87 1-92 1-107 (346)
314 2ep5_A 350AA long hypothetical 97.6 9.2E-05 3.2E-09 64.4 6.7 92 9-107 3-110 (350)
315 3h2s_A Putative NADH-flavin re 97.6 0.00057 1.9E-08 54.9 10.9 65 11-80 1-71 (224)
316 3tum_A Shikimate dehydrogenase 97.6 0.00024 8.3E-09 59.3 8.7 92 9-105 124-225 (269)
317 3c8m_A Homoserine dehydrogenas 97.6 6.8E-05 2.3E-09 64.7 5.4 89 8-104 4-120 (331)
318 2r00_A Aspartate-semialdehyde 97.6 3.2E-05 1.1E-09 66.8 3.2 96 9-108 2-99 (336)
319 3eag_A UDP-N-acetylmuramate:L- 97.6 0.0002 7E-09 61.6 8.2 68 10-82 4-79 (326)
320 4a26_A Putative C-1-tetrahydro 97.6 9.9E-05 3.4E-09 62.2 5.9 76 7-104 162-238 (300)
321 3ngx_A Bifunctional protein fo 97.6 0.00011 3.7E-09 61.2 6.0 71 9-104 149-221 (276)
322 3l07_A Bifunctional protein fo 97.5 0.00021 7E-09 59.8 7.6 74 7-104 158-232 (285)
323 3ew7_A LMO0794 protein; Q8Y8U8 97.5 0.00062 2.1E-08 54.4 10.4 64 11-80 1-70 (221)
324 1c1d_A L-phenylalanine dehydro 97.5 0.0004 1.4E-08 60.2 9.6 89 8-107 173-263 (355)
325 3r6d_A NAD-dependent epimerase 97.5 0.00015 5.2E-09 58.3 6.3 66 11-81 6-83 (221)
326 3e5r_O PP38, glyceraldehyde-3- 97.5 0.00021 7.3E-09 61.6 7.3 90 10-105 3-126 (337)
327 2dvm_A Malic enzyme, 439AA lon 97.5 0.00085 2.9E-08 59.7 11.3 97 8-109 184-300 (439)
328 3tnl_A Shikimate dehydrogenase 97.5 0.0003 1E-08 60.1 8.0 93 8-105 152-263 (315)
329 3u95_A Glycoside hydrolase, fa 97.5 0.00059 2E-08 61.7 10.2 68 11-79 1-84 (477)
330 3t4e_A Quinate/shikimate dehyd 97.5 0.00027 9.2E-09 60.3 7.4 94 8-105 146-257 (312)
331 3p2o_A Bifunctional protein fo 97.5 0.00027 9.2E-09 59.1 7.1 75 6-104 156-231 (285)
332 1vl6_A Malate oxidoreductase; 97.4 0.00045 1.5E-08 60.2 8.5 94 7-108 189-297 (388)
333 4dpl_A Malonyl-COA/succinyl-CO 97.4 0.00014 4.7E-09 63.4 5.0 95 9-109 6-114 (359)
334 4dpk_A Malonyl-COA/succinyl-CO 97.4 0.00014 4.7E-09 63.4 5.0 95 9-109 6-114 (359)
335 2c2x_A Methylenetetrahydrofola 97.4 0.00028 9.5E-09 58.8 6.3 75 6-104 154-231 (281)
336 4h7p_A Malate dehydrogenase; s 97.3 0.0013 4.5E-08 56.8 10.4 105 5-110 19-155 (345)
337 1y1p_A ARII, aldehyde reductas 97.3 0.00065 2.2E-08 58.1 8.4 73 2-79 3-91 (342)
338 3hsk_A Aspartate-semialdehyde 97.3 0.00027 9.2E-09 61.9 5.8 96 8-109 17-128 (381)
339 1hdo_A Biliverdin IX beta redu 97.3 0.00017 5.7E-09 57.1 4.2 66 10-80 3-76 (206)
340 1nvt_A Shikimate 5'-dehydrogen 97.3 0.00053 1.8E-08 57.8 7.4 91 8-105 126-230 (287)
341 1a4i_A Methylenetetrahydrofola 97.3 0.00056 1.9E-08 57.6 7.2 76 6-105 161-237 (301)
342 4a5o_A Bifunctional protein fo 97.3 0.0005 1.7E-08 57.5 6.7 74 7-104 158-232 (286)
343 3pwk_A Aspartate-semialdehyde 97.3 0.00016 5.5E-09 63.0 3.9 95 10-108 2-98 (366)
344 3gpi_A NAD-dependent epimerase 97.3 0.00014 4.8E-09 60.9 3.5 63 8-79 1-71 (286)
345 1zud_1 Adenylyltransferase THI 97.3 0.00063 2.2E-08 56.2 7.2 78 10-91 28-138 (251)
346 3cps_A Glyceraldehyde 3-phosph 97.3 0.0015 5.1E-08 56.6 9.7 94 7-106 14-139 (354)
347 5mdh_A Malate dehydrogenase; o 97.2 0.0012 4.1E-08 56.9 8.9 99 10-109 3-133 (333)
348 7mdh_A Protein (malate dehydro 97.2 0.00098 3.3E-08 58.1 8.4 101 10-110 32-163 (375)
349 1b0a_A Protein (fold bifunctio 97.2 0.0004 1.4E-08 58.1 5.3 75 6-104 155-230 (288)
350 3dhn_A NAD-dependent epimerase 97.2 0.00018 6.2E-09 58.0 3.2 67 9-81 3-77 (227)
351 1lnq_A MTHK channels, potassiu 97.2 0.0015 5.1E-08 56.2 9.2 88 10-104 115-210 (336)
352 1qyc_A Phenylcoumaran benzylic 97.2 0.00075 2.6E-08 56.9 7.1 77 10-91 4-100 (308)
353 3rui_A Ubiquitin-like modifier 97.1 0.0013 4.5E-08 56.5 8.1 89 10-104 34-170 (340)
354 3e48_A Putative nucleoside-dip 97.1 0.00078 2.7E-08 56.4 6.7 65 11-80 1-74 (289)
355 1qyd_A Pinoresinol-lariciresin 97.1 0.0011 3.6E-08 56.1 7.4 66 10-80 4-85 (313)
356 2r6j_A Eugenol synthase 1; phe 97.1 0.00082 2.8E-08 57.1 6.5 78 10-92 11-103 (318)
357 3lk7_A UDP-N-acetylmuramoylala 97.1 0.0011 3.7E-08 59.6 7.4 66 9-79 8-80 (451)
358 1hye_A L-lactate/malate dehydr 97.0 0.0019 6.5E-08 55.1 8.3 66 11-79 1-82 (313)
359 1ebf_A Homoserine dehydrogenas 97.0 0.00026 8.8E-09 61.7 2.6 90 9-104 3-114 (358)
360 3dqp_A Oxidoreductase YLBE; al 97.0 0.00029 9.9E-09 56.6 2.6 63 11-80 1-72 (219)
361 2x4g_A Nucleoside-diphosphate- 97.0 0.0007 2.4E-08 58.0 5.1 66 9-79 12-85 (342)
362 1gad_O D-glyceraldehyde-3-phos 96.9 0.0037 1.2E-07 53.7 9.1 92 11-108 2-122 (330)
363 2wm3_A NMRA-like family domain 96.9 0.0015 5.1E-08 54.9 6.3 66 10-80 5-81 (299)
364 2gas_A Isoflavone reductase; N 96.9 0.0014 4.8E-08 55.2 6.0 77 10-91 2-99 (307)
365 1vkn_A N-acetyl-gamma-glutamyl 96.9 0.0012 4.2E-08 57.1 5.6 101 10-118 13-123 (351)
366 4gsl_A Ubiquitin-like modifier 96.9 0.0032 1.1E-07 58.1 8.5 89 10-104 326-462 (615)
367 3tz6_A Aspartate-semialdehyde 96.9 0.00078 2.7E-08 58.2 4.3 93 11-108 2-97 (344)
368 2x5j_O E4PDH, D-erythrose-4-ph 96.9 0.0031 1.1E-07 54.4 7.9 91 11-106 3-126 (339)
369 4gx0_A TRKA domain protein; me 96.8 0.0021 7E-08 59.4 7.2 90 11-108 349-445 (565)
370 2ph5_A Homospermidine synthase 96.8 0.0019 6.4E-08 57.9 6.5 91 11-105 14-114 (480)
371 3b1j_A Glyceraldehyde 3-phosph 96.8 0.0037 1.3E-07 53.9 8.2 93 11-105 3-124 (339)
372 3c1o_A Eugenol synthase; pheny 96.8 0.002 7E-08 54.6 6.5 78 10-92 4-101 (321)
373 3cmc_O GAPDH, glyceraldehyde-3 96.8 0.0033 1.1E-07 54.0 7.6 89 11-105 2-121 (334)
374 2csu_A 457AA long hypothetical 96.8 0.0046 1.6E-07 55.6 8.8 89 9-109 7-100 (457)
375 1lu9_A Methylene tetrahydromet 96.8 0.0025 8.7E-08 53.5 6.7 44 8-56 117-161 (287)
376 1t4b_A Aspartate-semialdehyde 96.7 0.0014 4.8E-08 57.2 5.0 93 11-108 2-101 (367)
377 1y7t_A Malate dehydrogenase; N 96.7 0.0025 8.7E-08 54.6 6.4 70 9-79 3-88 (327)
378 2d2i_A Glyceraldehyde 3-phosph 96.7 0.0044 1.5E-07 54.0 7.9 80 11-91 3-111 (380)
379 3m2p_A UDP-N-acetylglucosamine 96.7 0.0017 5.7E-08 55.0 4.8 62 10-79 2-70 (311)
380 3h8v_A Ubiquitin-like modifier 96.6 0.006 2.1E-07 51.4 8.0 35 10-48 36-70 (292)
381 2yv3_A Aspartate-semialdehyde 96.6 0.00091 3.1E-08 57.6 3.0 91 11-108 1-95 (331)
382 2jl1_A Triphenylmethane reduct 96.6 0.0017 5.9E-08 54.1 4.6 65 11-80 1-75 (287)
383 1xq6_A Unknown protein; struct 96.6 0.0026 8.8E-08 51.7 5.6 66 8-79 2-77 (253)
384 2gn4_A FLAA1 protein, UDP-GLCN 96.6 0.0035 1.2E-07 54.1 6.7 75 2-80 13-100 (344)
385 4g65_A TRK system potassium up 96.6 0.01 3.5E-07 53.4 9.8 85 10-100 235-329 (461)
386 1hdg_O Holo-D-glyceraldehyde-3 96.6 0.0063 2.2E-07 52.2 7.9 91 11-105 1-122 (332)
387 3vh1_A Ubiquitin-like modifier 96.5 0.0073 2.5E-07 55.6 8.5 34 10-47 327-360 (598)
388 2zcu_A Uncharacterized oxidore 96.5 0.0056 1.9E-07 50.8 7.2 64 12-80 1-74 (286)
389 1pjq_A CYSG, siroheme synthase 96.5 0.0088 3E-07 53.8 8.7 78 1-83 1-84 (457)
390 3slg_A PBGP3 protein; structur 96.5 0.0012 4E-08 57.4 2.7 67 8-79 22-99 (372)
391 1rm4_O Glyceraldehyde 3-phosph 96.5 0.013 4.6E-07 50.2 9.2 94 11-108 2-125 (337)
392 4hv4_A UDP-N-acetylmuramate--L 96.4 0.0069 2.3E-07 55.0 7.7 69 9-82 21-94 (494)
393 3two_A Mannitol dehydrogenase; 96.4 0.009 3.1E-07 51.5 8.0 86 10-104 177-264 (348)
394 4gx0_A TRKA domain protein; me 96.4 0.025 8.7E-07 52.1 11.5 68 10-83 127-203 (565)
395 3h5n_A MCCB protein; ubiquitin 96.4 0.016 5.4E-07 50.3 9.5 34 10-47 118-151 (353)
396 3ruf_A WBGU; rossmann fold, UD 96.4 0.0075 2.6E-07 51.7 7.3 67 9-80 24-109 (351)
397 1y8q_A Ubiquitin-like 1 activa 96.4 0.012 4.2E-07 50.8 8.5 88 10-103 36-155 (346)
398 4b4o_A Epimerase family protei 96.3 0.0021 7.1E-08 54.1 3.2 58 11-79 1-59 (298)
399 3sxp_A ADP-L-glycero-D-mannohe 96.3 0.0046 1.6E-07 53.4 5.5 44 1-49 1-47 (362)
400 1kyq_A Met8P, siroheme biosynt 96.3 0.0042 1.4E-07 51.8 5.0 35 9-48 12-46 (274)
401 3hn7_A UDP-N-acetylmuramate-L- 96.3 0.011 3.6E-07 54.2 8.1 68 10-82 19-93 (524)
402 2c5a_A GDP-mannose-3', 5'-epim 96.3 0.003 1E-07 55.1 4.3 66 9-79 28-101 (379)
403 3o38_A Short chain dehydrogena 96.3 0.023 7.8E-07 46.8 9.4 85 9-106 21-110 (266)
404 2jah_A Clavulanic acid dehydro 96.3 0.024 8.3E-07 46.2 9.4 89 4-106 1-93 (247)
405 1p3d_A UDP-N-acetylmuramate--a 96.2 0.013 4.5E-07 52.8 8.3 63 10-78 18-84 (475)
406 1iy8_A Levodione reductase; ox 96.2 0.025 8.5E-07 46.7 9.2 86 9-106 12-101 (267)
407 3i1j_A Oxidoreductase, short c 96.2 0.027 9.3E-07 45.7 9.3 86 8-106 12-103 (247)
408 3nkl_A UDP-D-quinovosamine 4-d 96.1 0.0099 3.4E-07 44.0 5.8 78 9-91 3-88 (141)
409 3h2z_A Mannitol-1-phosphate 5- 96.1 0.016 5.3E-07 50.8 7.8 94 11-109 1-125 (382)
410 3uog_A Alcohol dehydrogenase; 96.1 0.015 5.2E-07 50.4 7.7 86 10-104 190-286 (363)
411 2gdz_A NAD+-dependent 15-hydro 96.1 0.028 9.6E-07 46.3 9.0 87 8-107 5-96 (267)
412 1e3j_A NADP(H)-dependent ketos 96.0 0.047 1.6E-06 47.0 10.5 86 10-104 169-270 (352)
413 2g82_O GAPDH, glyceraldehyde-3 96.0 0.022 7.6E-07 48.8 8.2 88 11-105 1-119 (331)
414 1xgk_A Nitrogen metabolite rep 96.0 0.008 2.7E-07 52.0 5.5 67 9-80 4-82 (352)
415 2o7s_A DHQ-SDH PR, bifunctiona 96.0 0.011 3.7E-07 54.2 6.5 43 9-56 363-405 (523)
416 2f00_A UDP-N-acetylmuramate--L 96.0 0.022 7.5E-07 51.6 8.5 65 9-78 18-85 (491)
417 4e6p_A Probable sorbitol dehyd 96.0 0.053 1.8E-06 44.4 10.2 81 8-106 6-91 (259)
418 2rh8_A Anthocyanidin reductase 96.0 0.01 3.5E-07 50.6 6.0 65 10-79 9-88 (338)
419 2o23_A HADH2 protein; HSD17B10 96.0 0.035 1.2E-06 45.4 9.0 81 8-106 10-95 (265)
420 1yo6_A Putative carbonyl reduc 95.9 0.032 1.1E-06 45.0 8.5 81 9-106 2-90 (250)
421 1vm6_A DHPR, dihydrodipicolina 95.9 0.035 1.2E-06 44.7 8.3 80 10-113 12-92 (228)
422 2bka_A CC3, TAT-interacting pr 95.9 0.0067 2.3E-07 49.1 4.2 70 8-80 16-93 (242)
423 1sb8_A WBPP; epimerase, 4-epim 95.9 0.016 5.4E-07 49.8 6.8 68 8-80 25-111 (352)
424 3ip1_A Alcohol dehydrogenase, 95.9 0.065 2.2E-06 47.1 10.9 92 9-104 213-317 (404)
425 3l6e_A Oxidoreductase, short-c 95.8 0.038 1.3E-06 44.7 8.5 81 9-106 2-86 (235)
426 2a9f_A Putative malic enzyme ( 95.8 0.011 3.9E-07 51.5 5.4 95 7-109 185-293 (398)
427 3oh8_A Nucleoside-diphosphate 95.8 0.0064 2.2E-07 55.5 4.1 62 10-79 147-209 (516)
428 2ydy_A Methionine adenosyltran 95.8 0.012 3.9E-07 49.7 5.5 64 10-79 2-68 (315)
429 1tt5_B Ubiquitin-activating en 95.8 0.023 7.9E-07 50.6 7.4 77 10-90 40-148 (434)
430 1rjw_A ADH-HT, alcohol dehydro 95.7 0.029 1E-06 48.1 7.9 86 10-104 165-260 (339)
431 3lf2_A Short chain oxidoreduct 95.7 0.061 2.1E-06 44.3 9.6 88 7-106 5-96 (265)
432 3pzr_A Aspartate-semialdehyde 95.7 0.0089 3E-07 52.1 4.5 93 11-107 1-99 (370)
433 3uw3_A Aspartate-semialdehyde 95.7 0.0095 3.3E-07 52.0 4.7 95 9-107 3-103 (377)
434 1pqw_A Polyketide synthase; ro 95.7 0.018 6.2E-07 45.1 6.0 46 9-59 38-84 (198)
435 3a06_A 1-deoxy-D-xylulose 5-ph 95.7 0.05 1.7E-06 46.9 9.0 79 10-92 3-107 (376)
436 4egf_A L-xylulose reductase; s 95.7 0.056 1.9E-06 44.5 9.2 83 11-106 21-107 (266)
437 2pzm_A Putative nucleotide sug 95.7 0.0036 1.2E-07 53.4 1.9 71 4-79 14-96 (330)
438 1yde_A Retinal dehydrogenase/r 95.7 0.066 2.3E-06 44.2 9.6 87 1-106 1-91 (270)
439 1hdc_A 3-alpha, 20 beta-hydrox 95.7 0.067 2.3E-06 43.7 9.6 82 8-106 3-88 (254)
440 1hxh_A 3BETA/17BETA-hydroxyste 95.7 0.066 2.3E-06 43.7 9.5 81 8-106 4-89 (253)
441 2cdc_A Glucose dehydrogenase g 95.7 0.023 7.9E-07 49.3 7.0 86 10-104 181-277 (366)
442 4hb9_A Similarities with proba 95.7 0.0096 3.3E-07 51.9 4.6 33 11-48 2-34 (412)
443 3n74_A 3-ketoacyl-(acyl-carrie 95.6 0.08 2.7E-06 43.3 9.9 80 9-106 8-92 (261)
444 3ai3_A NADPH-sorbose reductase 95.6 0.087 3E-06 43.2 10.1 86 8-106 5-94 (263)
445 3nyw_A Putative oxidoreductase 95.6 0.035 1.2E-06 45.4 7.6 86 8-105 5-95 (250)
446 3h9e_O Glyceraldehyde-3-phosph 95.6 0.066 2.3E-06 45.9 9.3 44 9-56 6-51 (346)
447 2pnf_A 3-oxoacyl-[acyl-carrier 95.6 0.08 2.7E-06 42.7 9.7 86 8-106 5-94 (248)
448 3oig_A Enoyl-[acyl-carrier-pro 95.6 0.068 2.3E-06 43.9 9.3 86 8-106 5-96 (266)
449 3ged_A Short-chain dehydrogena 95.6 0.054 1.8E-06 44.4 8.5 77 11-105 3-83 (247)
450 4id9_A Short-chain dehydrogena 95.6 0.011 3.6E-07 50.7 4.5 60 9-79 18-85 (347)
451 2wsb_A Galactitol dehydrogenas 95.6 0.09 3.1E-06 42.6 10.0 79 9-106 10-94 (254)
452 3rwb_A TPLDH, pyridoxal 4-dehy 95.6 0.097 3.3E-06 42.6 10.1 81 8-106 4-89 (247)
453 2h6e_A ADH-4, D-arabinose 1-de 95.6 0.026 9E-07 48.5 6.9 87 9-104 170-268 (344)
454 3guy_A Short-chain dehydrogena 95.6 0.071 2.4E-06 42.7 9.2 40 12-56 3-43 (230)
455 1tt5_A APPBP1, amyloid protein 95.6 0.053 1.8E-06 49.5 9.2 78 10-91 32-144 (531)
456 3sju_A Keto reductase; short-c 95.6 0.025 8.5E-07 47.1 6.6 82 11-106 25-110 (279)
457 1zem_A Xylitol dehydrogenase; 95.5 0.071 2.4E-06 43.7 9.3 86 7-106 4-93 (262)
458 3imf_A Short chain dehydrogena 95.5 0.025 8.5E-07 46.4 6.4 86 7-106 3-92 (257)
459 3ak4_A NADH-dependent quinucli 95.5 0.084 2.9E-06 43.2 9.7 81 9-106 11-95 (263)
460 1yqd_A Sinapyl alcohol dehydro 95.5 0.024 8.1E-07 49.3 6.5 86 10-104 188-281 (366)
461 4g81_D Putative hexonate dehyd 95.5 0.038 1.3E-06 45.6 7.4 80 12-105 10-94 (255)
462 3tzq_B Short-chain type dehydr 95.5 0.057 1.9E-06 44.7 8.6 82 7-106 8-94 (271)
463 3ucx_A Short chain dehydrogena 95.5 0.044 1.5E-06 45.1 7.8 86 7-106 8-97 (264)
464 1p0f_A NADP-dependent alcohol 95.5 0.08 2.7E-06 45.9 9.8 87 10-104 192-292 (373)
465 2a4k_A 3-oxoacyl-[acyl carrier 95.4 0.09 3.1E-06 43.3 9.6 80 9-106 5-89 (263)
466 2x5o_A UDP-N-acetylmuramoylala 95.4 0.0097 3.3E-07 53.2 3.8 65 9-79 4-72 (439)
467 3fpf_A Mtnas, putative unchara 95.4 0.094 3.2E-06 44.1 9.6 90 9-104 122-221 (298)
468 3dii_A Short-chain dehydrogena 95.4 0.035 1.2E-06 45.3 6.9 78 11-106 3-84 (247)
469 3tjr_A Short chain dehydrogena 95.4 0.047 1.6E-06 46.0 7.9 83 10-106 31-117 (301)
470 2jhf_A Alcohol dehydrogenase E 95.4 0.096 3.3E-06 45.4 10.1 87 10-104 192-292 (374)
471 1e3i_A Alcohol dehydrogenase, 95.4 0.099 3.4E-06 45.4 10.2 87 10-104 196-296 (376)
472 1yxm_A Pecra, peroxisomal tran 95.4 0.11 3.7E-06 43.5 10.1 90 8-106 16-109 (303)
473 2bll_A Protein YFBG; decarboxy 95.4 0.011 3.7E-07 50.4 3.9 64 11-79 1-75 (345)
474 3ko8_A NAD-dependent epimerase 95.4 0.015 5.2E-07 48.8 4.8 63 11-79 1-70 (312)
475 2pd6_A Estradiol 17-beta-dehyd 95.4 0.079 2.7E-06 43.2 9.1 93 7-106 4-101 (264)
476 1xg5_A ARPG836; short chain de 95.4 0.086 2.9E-06 43.6 9.3 86 9-106 31-120 (279)
477 1yb1_A 17-beta-hydroxysteroid 95.4 0.056 1.9E-06 44.6 8.2 85 8-106 29-117 (272)
478 3gvc_A Oxidoreductase, probabl 95.4 0.067 2.3E-06 44.4 8.6 78 11-106 30-112 (277)
479 4fgs_A Probable dehydrogenase 95.4 0.067 2.3E-06 44.5 8.5 76 12-105 30-111 (273)
480 1iz0_A Quinone oxidoreductase; 95.4 0.024 8.1E-07 47.8 5.9 85 10-104 126-217 (302)
481 2c29_D Dihydroflavonol 4-reduc 95.4 0.021 7.1E-07 48.6 5.6 66 9-79 4-85 (337)
482 3f1l_A Uncharacterized oxidore 95.4 0.12 4.2E-06 42.0 10.1 86 9-106 11-101 (252)
483 1uuf_A YAHK, zinc-type alcohol 95.4 0.028 9.7E-07 48.9 6.5 86 10-104 195-287 (369)
484 1w6u_A 2,4-dienoyl-COA reducta 95.4 0.15 5E-06 42.6 10.8 86 8-106 24-113 (302)
485 4dvj_A Putative zinc-dependent 95.3 0.057 1.9E-06 46.8 8.4 86 10-104 172-269 (363)
486 1cdo_A Alcohol dehydrogenase; 95.3 0.11 3.9E-06 45.0 10.3 87 10-104 193-293 (374)
487 4fn4_A Short chain dehydrogena 95.3 0.077 2.6E-06 43.6 8.7 80 12-105 8-92 (254)
488 3ftp_A 3-oxoacyl-[acyl-carrier 95.3 0.045 1.5E-06 45.3 7.4 84 9-106 27-114 (270)
489 3pk0_A Short-chain dehydrogena 95.3 0.1 3.4E-06 42.9 9.4 84 10-106 10-97 (262)
490 3s2e_A Zinc-containing alcohol 95.3 0.029 1E-06 48.1 6.4 86 10-104 167-262 (340)
491 2q1s_A Putative nucleotide sug 95.3 0.014 4.9E-07 50.7 4.4 67 9-80 31-108 (377)
492 3enk_A UDP-glucose 4-epimerase 95.3 0.016 5.3E-07 49.5 4.5 66 9-79 4-86 (341)
493 1zk4_A R-specific alcohol dehy 95.3 0.11 3.9E-06 41.9 9.6 83 8-106 4-91 (251)
494 1xu9_A Corticosteroid 11-beta- 95.3 0.064 2.2E-06 44.6 8.2 84 8-104 26-113 (286)
495 3jyn_A Quinone oxidoreductase; 95.3 0.029 9.9E-07 47.8 6.2 87 9-104 140-238 (325)
496 3p19_A BFPVVD8, putative blue 95.3 0.039 1.3E-06 45.6 6.8 77 10-106 16-96 (266)
497 1cyd_A Carbonyl reductase; sho 95.3 0.038 1.3E-06 44.6 6.6 44 8-56 5-49 (244)
498 1v3u_A Leukotriene B4 12- hydr 95.3 0.041 1.4E-06 46.9 7.1 46 9-59 145-191 (333)
499 2ehd_A Oxidoreductase, oxidore 95.2 0.096 3.3E-06 42.0 8.9 78 11-106 6-87 (234)
500 3vps_A TUNA, NAD-dependent epi 95.2 0.018 6.2E-07 48.5 4.7 36 9-49 6-42 (321)
No 1
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=100.00 E-value=6.3e-52 Score=354.10 Aligned_cols=265 Identities=38% Similarity=0.594 Sum_probs=248.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
|++|||+|||+|+||.+|+++|.++|+ +..+|++| +|++++.+.+.+ .|+....++.++++++|+||+||||+.+++
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~-~~~~V~v~-dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p~~~~~ 78 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGY-DPNRICVT-NRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQIKM 78 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTC-CGGGEEEE-CSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCGGGHHH
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCC-CCCeEEEE-eCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCHHHHHH
Confidence 356899999999999999999999996 55689999 999999999987 599888888899999999999999999999
Q ss_pred HHHHhccc-cCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCe
Q 024016 87 VAMQIRPL-LSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKI 164 (274)
Q Consensus 87 v~~~i~~~-l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~ 164 (274)
++.++.+. ++++++|||+++|++.+.++++++ +.+++|.|||+|..++.|.+.+++++..++++.+.++++|+.+|..
T Consensus 79 vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~~~~~~~~~~~v~~l~~~iG~~ 158 (280)
T 3tri_A 79 VCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFANETVDKDQKNLAESIMRAVGLV 158 (280)
T ss_dssp HHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHGGGEEE
T ss_pred HHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeCCCCCHHHHHHHHHHHHHCCCe
Confidence 99999988 888889999999999999999987 4789999999999999999999888888999999999999999987
Q ss_pred EEc-CccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCCchH
Q 024016 165 WRA-DEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTT 243 (274)
Q Consensus 165 ~~~-~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 243 (274)
+++ +|+++|.+++++||+|+|++.+++++.+++++.|++++++++++.+++.|+.+++.+++.+|..|++.++||||+|
T Consensus 159 ~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~~G~a~~~~~~~~~p~~l~~~v~spgGtT 238 (280)
T 3tri_A 159 IWVSSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGTT 238 (280)
T ss_dssp EECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHCCTTSHH
T ss_pred EEECCHHHhhHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhccCCChHH
Confidence 655 7889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 244 IAGIHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 244 ~~~l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
+++|+.||++||+..+.++++++++|++||+
T Consensus 239 ~~~l~~le~~g~~~~~~~av~aa~~r~~el~ 269 (280)
T 3tri_A 239 EQAIKVLESGNLRELFIKALTAAVNRAKELS 269 (280)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999984
No 2
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=100.00 E-value=1.6e-45 Score=309.49 Aligned_cols=244 Identities=36% Similarity=0.625 Sum_probs=199.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
+|||+|||+|+||.+|+++|.++|+.+..+|++| +|++++.+.+.+ .|+....++.++++++|+||+|||++.+++++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~-~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~~~~v~ 80 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICS-DLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDLYASII 80 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEE-CSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTTHHHHC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEE-eCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHHHHHHH
Confidence 3699999999999999999999997566689999 999999998876 69988888889999999999999999999999
Q ss_pred HHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCeEEc
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRA 167 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~~~~ 167 (274)
+++.+.++++++|||++++++.+.+++.++ +.++++.||++|...+.|.+.+++++..+++.++.++++|+.+|..+++
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~ 160 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNEMVTEKDLEDVLNIFNSFGQTEIV 160 (247)
T ss_dssp ---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHGGGEEEEEC
T ss_pred HHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCCCCCHHHHHHHHHHHHhCCCEEEe
Confidence 999999999999999999999999998886 4689999999999999998888887778899999999999999998778
Q ss_pred CccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCCchHHHHH
Q 024016 168 DEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAGI 247 (274)
Q Consensus 168 ~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~l 247 (274)
+|+++|.+++++|++|+|++.+++++.+++++.|++++++++++.+++.|+.+++.+++.+|..|+++++||||+|+++|
T Consensus 161 ~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~~~~~~~~p~~l~~~v~spgG~t~~gl 240 (247)
T 3gt0_A 161 SEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKMVLETGIHPGELKDMVCSPGGTTIEAV 240 (247)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSCC--------------------
T ss_pred CHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCC
Q 024016 248 HELEKSG 254 (274)
Q Consensus 248 ~~l~~~~ 254 (274)
+.||++|
T Consensus 241 ~~le~~~ 247 (247)
T 3gt0_A 241 ATLEEKG 247 (247)
T ss_dssp -------
T ss_pred HHHHhCc
Confidence 9998864
No 3
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=100.00 E-value=2.3e-43 Score=307.12 Aligned_cols=269 Identities=45% Similarity=0.723 Sum_probs=239.0
Q ss_pred CCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH--HHHHHHHcCceeccCchhhccCCCEEEEeeCcc
Q 024016 5 PIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLK--RRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 5 ~~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~--~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~ 82 (274)
...|++|||+|||+|+||.+|+.+|.++|+.+..+|++| +|+++ +.+.+.+.|+.+..++.++++++|+||+|||++
T Consensus 17 ~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~-~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~~ 95 (322)
T 2izz_A 17 NLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMAS-SPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPH 95 (322)
T ss_dssp -----CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEE-CSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCGG
T ss_pred hhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEE-CCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCHH
Confidence 345567899999999999999999999992111299999 99986 788887789988878888889999999999999
Q ss_pred cHHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC----CCceEEEcCCcHHhhcCCceEEecCCCCCHHHHHHHHHHh
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG----HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLF 158 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~----~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll 158 (274)
++++++.++.+.++++++||++++|++.+.++++++ ..++++.+|+.|...+.|.+++++++..+++..+.++++|
T Consensus 96 ~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~~v~~~g~~~~~~~~~~v~~ll 175 (322)
T 2izz_A 96 IIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLL 175 (322)
T ss_dssp GHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 999999999988888999999999999887776653 3578999999999888888888777766789999999999
Q ss_pred hhcCCeEEcCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCC
Q 024016 159 GSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVAS 238 (274)
Q Consensus 159 ~~~g~~~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (274)
+.+|..++++++.++.++++++++|+|++.+++++.+++++.|++++.+++++.+++.++.+++.+++.+|..|++.+++
T Consensus 176 ~~~G~~~~~~e~~~~~~~a~~g~gpa~~~~~~eala~a~~~~Gl~~~~a~~l~~~~~~g~~~~~~~~~~~p~~l~~~v~s 255 (322)
T 2izz_A 176 SSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSS 255 (322)
T ss_dssp HTTEEEEECCGGGHHHHHHHTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHCC
T ss_pred HhCCCEEEeCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCC
Confidence 99998777889999999999999999999999999999999999999999999999999999887777789999999999
Q ss_pred CCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 239 PGGTTIAGIHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 239 ~~g~t~~~l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
|+|+|+.+++.+++.+++..+.+++.++++|+++++
T Consensus 256 p~g~t~~~l~~l~~~g~~~~~~~av~~~~~ra~e~~ 291 (322)
T 2izz_A 256 PGGATIHALHVLESGGFRSLLINAVEASCIRTRELQ 291 (322)
T ss_dssp TTSHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999874
No 4
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=100.00 E-value=9.6e-41 Score=282.19 Aligned_cols=256 Identities=33% Similarity=0.568 Sum_probs=233.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
++|||+|||+|+||..++.+|.+.|+ +|.+| +|++++.+.+.+ .|+....++.++++++|+||+|+|++.+.++
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g~----~v~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~~~~~~~v 76 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTPH----ELIIS-GSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETV 76 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSSC----EEEEE-CSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCGGGHHHH
T ss_pred CccEEEEECCCHHHHHHHHHHHhCCC----eEEEE-CCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeCcHhHHHH
Confidence 35799999999999999999999998 99999 999999988876 5888777888888899999999999999988
Q ss_pred HHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCeEE
Q 024016 88 AMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWR 166 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~~~ 166 (274)
+.++. +++++|++.++++.+.+++.++ +.++++.+|++|...++|.+.++++...+++..+.++++|+.+|..++
T Consensus 77 ~~~l~----~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G~~~~ 152 (259)
T 2ahr_A 77 LKPLH----FKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFD 152 (259)
T ss_dssp HTTSC----CCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTEEEEE
T ss_pred HHHhc----cCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 87653 7789999989999998888887 357889999999988888877777766688999999999999997688
Q ss_pred cCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCCchHHHH
Q 024016 167 ADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAG 246 (274)
Q Consensus 167 ~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~ 246 (274)
++++++|.++++.|++|+|++.+.+++.+++++.|++++++++++.+++.++.+++.+++.+|..|++.+++|+|+|+.+
T Consensus 153 ~~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~p~~~~~~~ 232 (259)
T 2ahr_A 153 ISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAG 232 (259)
T ss_dssp CCGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHCCTTSHHHHH
T ss_pred ecHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCCCChhHHHH
Confidence 89999999999999999999999999999999999999999999999999999988777778999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024016 247 IHELEKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 247 l~~l~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
++.|++.+++..+.++++++++|++||
T Consensus 233 ~~~l~~~g~~~~~~~a~~~~~~r~~~~ 259 (259)
T 2ahr_A 233 LMELERLGLTATVSSAIDKTIDKAKSL 259 (259)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCChHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999987
No 5
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=100.00 E-value=8.5e-41 Score=282.89 Aligned_cols=259 Identities=37% Similarity=0.628 Sum_probs=232.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
|++|||+|||+|+||++|+.+|.++|+.+..+|++| +|++++ .|+.+..++.++++++|+||+|+|++.++++
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~-~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~v 74 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYY-GPSKKN------TTLNYMSSNEELARHCDIIVCAVKPDIAGSV 74 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEE-CSSCCS------SSSEECSCHHHHHHHCSEEEECSCTTTHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEE-eCCccc------CceEEeCCHHHHHhcCCEEEEEeCHHHHHHH
Confidence 556899999999999999999999992111189999 999876 5888777888888899999999999999999
Q ss_pred HHHhccccCCCCEEEEecCCCCHHHHHHhhCC-CceEEEcCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCeEE
Q 024016 88 AMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGH-SRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWR 166 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~~-~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~~~ 166 (274)
+.++.+.+ +++++|++++|++.+.+++.++. .++++++|++|...+.|.+.+++++..+++..+.++++|+.+|..++
T Consensus 75 ~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~G~~~~ 153 (262)
T 2rcy_A 75 LNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSNKNVNSTDKKYVNDIFNSCGIIHE 153 (262)
T ss_dssp HHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 99998888 67889999999999999888874 36789999999988888777777766688999999999999998778
Q ss_pred cCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCCchHHHH
Q 024016 167 ADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAG 246 (274)
Q Consensus 167 ~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~ 246 (274)
++++.+|.++++++++|++++.+++++.+++++.|++++.+++++.+++.++.++..+++.+|.+|.+.+.+|+++++.+
T Consensus 154 ~~~~~~~~~~a~~~~~~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~t~~~~ 233 (262)
T 2rcy_A 154 IKEKDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIKGSVEMVKKSDQPVQQLKDNIVSPGGITAVG 233 (262)
T ss_dssp CCGGGHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHCCTTSHHHHH
T ss_pred eCHHHccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCChHHHHH
Confidence 89999999999999999999999999999999999999999999999999999887666778999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 247 IHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 247 l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
++.|++.+++..+.++++++++|+++++
T Consensus 234 l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 261 (262)
T 2rcy_A 234 LYSLEKNSFKYTVMNAVEAACEKSKAMG 261 (262)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999985
No 6
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=100.00 E-value=1.4e-39 Score=275.57 Aligned_cols=255 Identities=32% Similarity=0.542 Sum_probs=232.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 11 FILGFIGAGKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g-~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
|||+|||+|+||++++.+|.++| + +|++| +|++++.+.+.+ .|+....++.+++ ++|+||+|+|++.+++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~----~v~~~-~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~~~~~~~v~ 74 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGY----RIYIA-NRGAEKRERLEKELGVETSATLPELH-SDDVLILAVKPQDMEAAC 74 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSC----EEEEE-CSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSCHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCC----eEEEE-CCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeCchhHHHHH
Confidence 58999999999999999999999 8 99999 999999998887 4888877888888 999999999999999999
Q ss_pred HHhccccCCCCEEEEecCCCCHHHHHHhhCC-CceEEEcCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCeEEc
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKLKDLQEWTGH-SRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRA 167 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~~~l~~~~~~-~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~~~~ 167 (274)
.++.+ + +++||+++++++.+.+++.++. .++++.+|++|...+.|.+.++.+...+++..+.++++|+.+|..+++
T Consensus 75 ~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~~~~ 151 (263)
T 1yqg_A 75 KNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWL 151 (263)
T ss_dssp TTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEEEEC
T ss_pred HHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEEEe
Confidence 88876 4 8899999899999889888874 578888999998888888777776666789999999999999976688
Q ss_pred C-ccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCCchHHHH
Q 024016 168 D-EKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTIAG 246 (274)
Q Consensus 168 ~-e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~ 246 (274)
+ ++.+|.++++.|++|++++.+++++.|++.+.|++++.+.+++.+++.++.+++.+++.+|..|.+.+++|+|+|..+
T Consensus 152 ~~~~~~~~~~al~g~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (263)
T 1yqg_A 152 DDEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQKNVTSKGGTTHEA 231 (263)
T ss_dssp SSTTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTCCTTSHHHHH
T ss_pred CChhhccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCChhHHHH
Confidence 8 889999999999999999999999999999999999999999999999999888877788999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 247 IHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 247 l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
++.|++.+++..+.+++.++++|+++++
T Consensus 232 l~~l~~~~~~~~~~~a~~~~~~~~~~~~ 259 (263)
T 1yqg_A 232 VEAFRRHRVAEAISEGVCACVRRSQEME 259 (263)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999874
No 7
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=100.00 E-value=2.2e-33 Score=239.53 Aligned_cols=251 Identities=13% Similarity=0.118 Sum_probs=206.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce--eccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVK--VLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~--~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
|||+|||+|+||++++..|.+.|+ +|++| +|++++.+.+.+.|+. ...++.++ +++|+||+|+|++.+.+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~ 74 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGH----YLIGV-SRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTL 74 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHH
Confidence 589999999999999999999998 99999 9999999888777763 45677777 8999999999999999999
Q ss_pred HHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCc------HHh----hcCC-ceEEecCCCCCHHHHHHHHH
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNT------PSA----VGEA-ATVMSLGGTATEEDGELIGK 156 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~------~~~----~~~g-~~~i~~~~~~~~~~~~~v~~ 156 (274)
.++.+.++++++|+++ ++++...++.... ..+++..+|.. |.. ...+ .+.++++...+++..+.+++
T Consensus 75 ~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~ 153 (279)
T 2f1k_A 75 EKLIPHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRS 153 (279)
T ss_dssp HHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHH
Confidence 9999888899999987 5566544433221 11444444432 211 1123 45566655567899999999
Q ss_pred HhhhcCC-eEEcCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 024016 157 LFGSVGK-IWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLP--RELALGLASQTVLGAASMVTKSGKHPGQLK 233 (274)
Q Consensus 157 ll~~~g~-~~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (274)
+|+.+|. ++++++..++.++++++++|++++. ++.+++.+.|++ ++.+..++.+++.++.+++. .+|..|+
T Consensus 154 l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~---al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~---~~p~~~~ 227 (279)
T 2f1k_A 154 VLEPLGVKIYLCTPADHDQAVAWISHLPVMVSA---ALIQACAGEKDGDILKLAQNLASSGFRDTSRVGG---GNPELGT 227 (279)
T ss_dssp HHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHH---HHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTGGG---SCHHHHH
T ss_pred HHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHH---HHHHHHHhcccccchhHHHhhcCCcccchhcccC---CCHHHHH
Confidence 9999996 5778888999999999998888754 778888888887 78889999999999998863 6899999
Q ss_pred HhcCCCCchHHHHHHHHHh--CCHHHHHH----HHHHHHHHHHhhcC
Q 024016 234 DDVASPGGTTIAGIHELEK--SGFRGILM----NAVVAAAKRSRELS 274 (274)
Q Consensus 234 ~~~~~~~g~t~~~l~~l~~--~~~~~~~~----~a~~~~~~r~~~~~ 274 (274)
+.+++|+++|.++++.|++ ++|+..+. +++.++++|+++++
T Consensus 228 ~~~~s~~~~~~~~l~~~~~~l~~~~~~i~~~d~~a~~~~~~~~~~~~ 274 (279)
T 2f1k_A 228 MMATYNQRALLKSLQDYRQHLDQLITLISNQQWPELHRLLQQTNGDR 274 (279)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999 89999999 99999999999873
No 8
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.97 E-value=4.5e-31 Score=226.38 Aligned_cols=253 Identities=16% Similarity=0.204 Sum_probs=197.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCc--eeccCchhhccCCCEEEEeeCccc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGV--KVLSDNNAVVEYSDVVVFSVKPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~~g~--~~~~~~~~~~~~aDiIil~v~~~~ 83 (274)
|++|||+|||+|+||.+++.+|.++ |+ +|++| +|++++.+.+.+.|. ....++.++++++|+||+|||++.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~----~V~~~-d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~ 78 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHY----KIVGY-NRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK 78 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTS----EEEEE-CSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCc----EEEEE-cCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH
Confidence 5678999999999999999999988 45 89999 999999988877776 355677788899999999999999
Q ss_pred HHHHHHHhccc-cCCCCEEEEecCCCCH---HHHHHhhCC--CceEEEcCC------cHHhh----cCCc-eEEecCCCC
Q 024016 84 VKDVAMQIRPL-LSRKKLLVSVAAGVKL---KDLQEWTGH--SRFIRVMPN------TPSAV----GEAA-TVMSLGGTA 146 (274)
Q Consensus 84 ~~~v~~~i~~~-l~~~~~vis~~~g~~~---~~l~~~~~~--~~~~~~~p~------~~~~~----~~g~-~~i~~~~~~ 146 (274)
+++++.++.+. ++++++|+++++ ++. +.+++.++. .+++..+|. .|... ..|. +.+++....
T Consensus 79 ~~~v~~~l~~~~l~~~~ivi~~~~-~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~ 157 (290)
T 3b1f_A 79 TIDFIKILADLDLKEDVIITDAGS-TKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLT 157 (290)
T ss_dssp HHHHHHHHHTSCCCTTCEEECCCS-CHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTC
T ss_pred HHHHHHHHHhcCCCCCCEEEECCC-CchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCC
Confidence 99999999888 888988886543 333 566776662 334444444 22111 1344 456665556
Q ss_pred CHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Q 024016 147 TEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYI-FLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTK 224 (274)
Q Consensus 147 ~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~-~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 224 (274)
+++..+.++++|+.+|.. ++++++.||..++..++.++++ +.+++.+. +.|++.+.+..+..++++++.+++
T Consensus 158 ~~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~s~~~~~~a~~~~~~~~----~~g~~~~~~~~la~~~~~~~~rla-- 231 (290)
T 3b1f_A 158 KPNTIPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQAG----DFSESHEMTKHFAAGGFRDMTRIA-- 231 (290)
T ss_dssp CTTHHHHHHHHTGGGCCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHH----HHHHHCTHHHHHCCHHHHHTTGGG--
T ss_pred CHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHH----hcccchhhHHhhccccHHhhhhhh--
Confidence 788999999999999976 6788888998766666655544 34444443 346556678899999999998887
Q ss_pred cCCChHHHHHhcCCCCchHHHHHHHHHh--CCHHHHHH----HHHHHHHHHHhhc
Q 024016 225 SGKHPGQLKDDVASPGGTTIAGIHELEK--SGFRGILM----NAVVAAAKRSREL 273 (274)
Q Consensus 225 ~~~~~~~~~~~~~~~~g~t~~~l~~l~~--~~~~~~~~----~a~~~~~~r~~~~ 273 (274)
+.+|..|++.+.+|++++..+++.|++ ..++..+. +++.+.+++++++
T Consensus 232 -~~~p~~~~~~~~~n~~~~~~~l~~~~~~l~~~~~~l~~~d~~~l~~~~~~~~~~ 285 (290)
T 3b1f_A 232 -ESEPGMWTSILLTNQEAVLDRIENFKQRLDEVSNLIKARDENAIWAFFNQSRQI 285 (290)
T ss_dssp -GSCHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999988 47888887 7899999998874
No 9
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.97 E-value=9.1e-31 Score=226.46 Aligned_cols=253 Identities=17% Similarity=0.213 Sum_probs=200.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc--eeccCchh-hccCCCEEEEeeCcccHHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV--KVLSDNNA-VVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~--~~~~~~~~-~~~~aDiIil~v~~~~~~~ 86 (274)
.+||+|||+|+||.+|+++|.++|+ ..+|++| ||++++.+.+.+.|+ ...+++.+ ++++||+||+|||++.+.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~--~~~V~~~-dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~ 109 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGF--KGKIYGY-DINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFRE 109 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTC--CSEEEEE-CSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCC--CCEEEEE-ECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHH
Confidence 4799999999999999999999997 2379999 999999988888887 45677788 8999999999999999999
Q ss_pred HHHHhccccCCCCEEEEecCCCC--HHHHHHhhCCCceEEEcCCcHHhh----------cCC-ceEEecCCCCCHHHHHH
Q 024016 87 VAMQIRPLLSRKKLLVSVAAGVK--LKDLQEWTGHSRFIRVMPNTPSAV----------GEA-ATVMSLGGTATEEDGEL 153 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~g~~--~~~l~~~~~~~~~~~~~p~~~~~~----------~~g-~~~i~~~~~~~~~~~~~ 153 (274)
++.++.+.++++++|+++++... .+.+++.++. +++..||..+... ..| .+++++++..+++.++.
T Consensus 110 vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~ 188 (314)
T 3ggo_A 110 IAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKL 188 (314)
T ss_dssp HHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHH
T ss_pred HHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHH
Confidence 99999999999998887644322 3556666654 6777777543211 134 45666666678999999
Q ss_pred HHHHhhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 024016 154 IGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQL 232 (274)
Q Consensus 154 v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (274)
++++|+.+|.. +++++++||.++++++++|++++. ++.....+.+.+.+++.++..++|+++.+++. .+|.+|
T Consensus 189 v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~a~---~l~~~~~~~~~~~~~~~~~a~~~frd~tRia~---~~p~~w 262 (314)
T 3ggo_A 189 VKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAF---ALVDTLIHMSTPEVDLFKYPGGGFKDFTRIAK---SDPIMW 262 (314)
T ss_dssp HHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHH---HHHHHHHHHCCSSCCGGGCCTTTTTTHHHHTT---SCHHHH
T ss_pred HHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCcchHHHHhhccccHHHHHHHhc---CCHHHH
Confidence 99999999975 889999999999999999998754 33344445555566677888999999999874 589999
Q ss_pred HHhcCCCCchHHHHHHHHHhC--CHHHHHHH----HHHHHHHHHhh
Q 024016 233 KDDVASPGGTTIAGIHELEKS--GFRGILMN----AVVAAAKRSRE 272 (274)
Q Consensus 233 ~~~~~~~~g~t~~~l~~l~~~--~~~~~~~~----a~~~~~~r~~~ 272 (274)
.+.+.+|.....+.|+.+++. .+...+.+ .+.+.++++++
T Consensus 263 ~di~~~N~~~~~~~l~~~~~~l~~l~~~l~~~d~~~l~~~~~~a~~ 308 (314)
T 3ggo_A 263 RDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEELVEYLKEVKI 308 (314)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHH
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999988888888888774 55555553 67777777765
No 10
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.97 E-value=2.2e-30 Score=221.74 Aligned_cols=240 Identities=16% Similarity=0.220 Sum_probs=191.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
+|||+|||+ |+||++++.+|.++|+ +|++| +|++++.+.+.+.|+... ++.++++++|+||+|+|++.+++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~----~V~~~-~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~~~~~v~ 84 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAH----HLAAI-EIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDNIIEKVA 84 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSS----EEEEE-CCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCchHHHHHH
Confidence 469999999 9999999999999999 99999 999999988887776654 6678889999999999999999999
Q ss_pred HHhccccCCCCEEEEecCCCCHHHHHHhhCCCceEEEcCCcHHh--------hcCC-------ceEEecCCCCCHHHHHH
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSA--------VGEA-------ATVMSLGGTATEEDGEL 153 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~~~l~~~~~~~~~~~~~p~~~~~--------~~~g-------~~~i~~~~~~~~~~~~~ 153 (274)
.++.+.++++++||+++++.+.+.+++..++.++++.||+.|.. ...| .+.++.....+++..+.
T Consensus 85 ~~l~~~l~~~~ivv~~s~~~~~~~l~~~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~ 164 (286)
T 3c24_A 85 EDIVPRVRPGTIVLILDAAAPYAGVMPERADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAI 164 (286)
T ss_dssp HHHGGGSCTTCEEEESCSHHHHHTCSCCCTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHH
T ss_pred HHHHHhCCCCCEEEECCCCchhHHHHhhhCCCeEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHH
Confidence 99998888999999987777666555533456788899987654 5566 34343323357889999
Q ss_pred HHHHhhhcCC----eEEcCccchhhH-HHhh-cchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCC
Q 024016 154 IGKLFGSVGK----IWRADEKLFDAI-TGLS-GSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGK 227 (274)
Q Consensus 154 v~~ll~~~g~----~~~~~e~~~~~~-~a~~-~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (274)
++++|+.+|. +++++++.++.+ .+++ +++++++..+++++.+++++.|++++++++++.+++.++..++.+ .
T Consensus 165 v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~--~ 242 (286)
T 3c24_A 165 GADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMIGHLNVEIAMWFG--Y 242 (286)
T ss_dssp HHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTT--S
T ss_pred HHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh--h
Confidence 9999999997 478898889988 7766 577888888999999988889999999999999999999877654 5
Q ss_pred ChHHHHHhcCCCCchHHHHHHHHHhCCHHHHHH
Q 024016 228 HPGQLKDDVASPGGTTIAGIHELEKSGFRGILM 260 (274)
Q Consensus 228 ~~~~~~~~~~~~~g~t~~~l~~l~~~~~~~~~~ 260 (274)
+|..|.+....+ .......+++.++...+.
T Consensus 243 ~p~~~~di~~~~---i~~~~~~l~~~~~~~~~~ 272 (286)
T 3c24_A 243 SPKVPSDAALRL---MEFAKDIVVKEDWREALN 272 (286)
T ss_dssp SCCC---CCSTT---HHHHHHHHBCTTGGGGGC
T ss_pred CCchhHHHHHHH---HHHHHHHHhccCHHHhcC
Confidence 787888777666 344444456666655544
No 11
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.97 E-value=6.6e-30 Score=218.17 Aligned_cols=252 Identities=17% Similarity=0.223 Sum_probs=194.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce--eccCchhhcc-CCCEEEEeeCcccHHHH
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVK--VLSDNNAVVE-YSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~--~~~~~~~~~~-~aDiIil~v~~~~~~~v 87 (274)
+||+|||+|+||.+++..|.+.|+ ..+|++| +|++++.+.+.+.|+. ..+++.++++ ++|+||+|||++...++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~--~~~V~~~-d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v 78 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF--KGKIYGY-DINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREI 78 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC--CSEEEEE-CSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC--CcEEEEE-eCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHH
Confidence 589999999999999999999986 2369999 9999998888777764 3557778888 99999999999999999
Q ss_pred HHHhccccCCCCEEEEecCCCC--HHHHHHhhCCCceEEEcCCc------HHhh----cCCc-eEEecCCCCCHHHHHHH
Q 024016 88 AMQIRPLLSRKKLLVSVAAGVK--LKDLQEWTGHSRFIRVMPNT------PSAV----GEAA-TVMSLGGTATEEDGELI 154 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~~~g~~--~~~l~~~~~~~~~~~~~p~~------~~~~----~~g~-~~i~~~~~~~~~~~~~v 154 (274)
+.++.+.++++++|++++++.. .+.+++.++. .++..+|.. |... ..|. +.+++....+++..+.+
T Consensus 79 ~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~-~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v 157 (281)
T 2g5c_A 79 AKKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLV 157 (281)
T ss_dssp HHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHH
T ss_pred HHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc-cceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHH
Confidence 9999888888888777654332 2456666653 244433321 1111 2455 56666556688999999
Q ss_pred HHHhhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 024016 155 GKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLK 233 (274)
Q Consensus 155 ~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (274)
+++|+.+|.. +++++..+|.++++++++|+++.. ++.++..+.|++.+.+..++.++++++.+++. .+|..|+
T Consensus 158 ~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~---~~p~~~~ 231 (281)
T 2g5c_A 158 KRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAF---ALVDTLIHMSTPEVDLFKYPGGGFKDFTRIAK---SDPIMWR 231 (281)
T ss_dssp HHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHH---HHHHHHHHHCBTTBCGGGCCTTTGGGC---CC---SCHHHHH
T ss_pred HHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcccchHHHHhhccccHHHHhHHhc---CCHHHHH
Confidence 9999999975 778888899999999999988522 33444445677777788899999999988864 6899999
Q ss_pred HhcCCCCchHHHHHHHHHh--CCHHHHHHH----HHHHHHHHHhh
Q 024016 234 DDVASPGGTTIAGIHELEK--SGFRGILMN----AVVAAAKRSRE 272 (274)
Q Consensus 234 ~~~~~~~g~t~~~l~~l~~--~~~~~~~~~----a~~~~~~r~~~ 272 (274)
+.+++|+++|.++++.|++ .+++..+.+ .+.+.++++++
T Consensus 232 ~~~~sn~~~~~~~l~~~~~~l~~~~~~i~~~d~~~l~~~~~~~~~ 276 (281)
T 2g5c_A 232 DIFLENKENVMKAIEGFEKSLNHLKELIVREAEEELVEYLKEVKI 276 (281)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999 788888753 68888887765
No 12
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.96 E-value=4.9e-29 Score=214.45 Aligned_cols=235 Identities=15% Similarity=0.123 Sum_probs=180.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
++||+||| +|+||.+++.+|.+.|+ +|++| +|+++. ++.+++++||+||+|||++.+.+++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~----~V~~~-~~~~~~-------------~~~~~~~~aDvVilavp~~~~~~vl 82 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY----PISIL-DREDWA-------------VAESILANADVVIVSVPINLTLETI 82 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC----CEEEE-CTTCGG-------------GHHHHHTTCSEEEECSCGGGHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC----eEEEE-ECCccc-------------CHHHHhcCCCEEEEeCCHHHHHHHH
Confidence 35899999 99999999999999999 99999 998652 4556788999999999999999999
Q ss_pred HHhccccCCCCEEEEecCCCCHHHHH---HhhCCCceEEEcCCcHHh--hcCC-ceEEecCCCCCHHHHHHHHHHhhhcC
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKLKDLQ---EWTGHSRFIRVMPNTPSA--VGEA-ATVMSLGGTATEEDGELIGKLFGSVG 162 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~~~l~---~~~~~~~~~~~~p~~~~~--~~~g-~~~i~~~~~~~~~~~~~v~~ll~~~g 162 (274)
.++.+.++++++|+++ ++++...++ +.++ .+++..+|..... ...| .++++++. +++..+.++++|+.+|
T Consensus 83 ~~l~~~l~~~~iv~~~-~svk~~~~~~~~~~~~-~~~v~~hP~~g~~~~~~~g~~~~l~~~~--~~~~~~~v~~l~~~~G 158 (298)
T 2pv7_A 83 ERLKPYLTENMLLADL-TSVKREPLAKMLEVHT-GAVLGLHPMFGADIASMAKQVVVRCDGR--FPERYEWLLEQIQIWG 158 (298)
T ss_dssp HHHGGGCCTTSEEEEC-CSCCHHHHHHHHHHCS-SEEEEEEECSCTTCSCCTTCEEEEEEEE--CGGGTHHHHHHHHHTT
T ss_pred HHHHhhcCCCcEEEEC-CCCCcHHHHHHHHhcC-CCEEeeCCCCCCCchhhcCCeEEEecCC--CHHHHHHHHHHHHHcC
Confidence 9999888888876655 566654443 3333 3455545431111 1233 34455543 6788999999999999
Q ss_pred Ce-EEcCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH----HHHHHHhcCCChHHHHHhcC
Q 024016 163 KI-WRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLG----AASMVTKSGKHPGQLKDDVA 237 (274)
Q Consensus 163 ~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 237 (274)
.. ++++++.||.++++++++|+|++. ++.++..+.|++.+.+.++..+++++ +.+++ +.+|..|++.+.
T Consensus 159 ~~~~~~~~~~~d~~~a~~~~~p~~~a~---~l~~~l~~~g~~~~~~~~la~~~f~~~~~~~~ria---~~~p~~~~di~~ 232 (298)
T 2pv7_A 159 AKIYQTNATEHDHNMTYIQALRHFSTF---ANGLHLSKQPINLANLLALSSPIYRLELAMIGRLF---AQDAELYADIIM 232 (298)
T ss_dssp CEEEECCHHHHHHHHHHHTHHHHHHHH---HHHHHHTTSSCCHHHHHHTCCHHHHHHHHHHHHHH---TSCHHHHHHHHC
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCCHHHHHhhcCHHHHHHHHHHHHHh---cCCHHHHHHHHH
Confidence 75 788999999999999999998632 23344445899999999999999999 77775 468999999999
Q ss_pred CCCchHHHHHHHHHh--CCHHHHHH----HHHHHHHHHHhhc
Q 024016 238 SPGGTTIAGIHELEK--SGFRGILM----NAVVAAAKRSREL 273 (274)
Q Consensus 238 ~~~g~t~~~l~~l~~--~~~~~~~~----~a~~~~~~r~~~~ 273 (274)
+|++++. +++.+++ ..++..+. +++.+.++++++.
T Consensus 233 sn~~~~~-~l~~~~~~l~~~~~~l~~~d~~~l~~~~~~a~~~ 273 (298)
T 2pv7_A 233 DKSENLA-VIETLKQTYDEALTFFENNDRQGFIDAFHKVRDW 273 (298)
T ss_dssp ----CHH-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HCHHHHH-HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 9999999 9999988 47777777 6888888888763
No 13
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.96 E-value=6.9e-29 Score=213.07 Aligned_cols=252 Identities=14% Similarity=0.156 Sum_probs=186.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHHHHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDVA 88 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~~v~ 88 (274)
++||||||+|+||.+||++|+++|| +|++| ||++++++.+.+.|++.++++.|+++.+|+||+|+| ++++++|+
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~----~v~v~-dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~ 77 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGY----LLNVF-DLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLY 77 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCC----eEEEE-cCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHH
Confidence 5699999999999999999999999 99999 999999999999999999999999999999999998 45688888
Q ss_pred HH---hccccCCCCEEEEecCCCCHH---HHHHhhC--CCceEEE-cCCcHHhhcCCc-eEEecCCCCCHHHHHHHHHHh
Q 024016 89 MQ---IRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRV-MPNTPSAVGEAA-TVMSLGGTATEEDGELIGKLF 158 (274)
Q Consensus 89 ~~---i~~~l~~~~~vis~~~g~~~~---~l~~~~~--~~~~~~~-~p~~~~~~~~g~-~~i~~~~~~~~~~~~~v~~ll 158 (274)
.. +.+.+++|+++|+++ +++++ ++.+++. +..++.. +...|.....|. ++++.| +++.+++++++|
T Consensus 78 ~~~~g~~~~~~~g~iiId~s-T~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG---~~~~~~~~~p~l 153 (300)
T 3obb_A 78 LDDDGLLAHIAPGTLVLECS-TIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGG---DAEALEKARPLF 153 (300)
T ss_dssp HSSSSSTTSCCC-CEEEECS-CCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEES---CHHHHHHHHHHH
T ss_pred hchhhhhhcCCCCCEEEECC-CCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeC---CHHHHHHHHHHH
Confidence 54 667788999999874 45554 3444443 3344432 123455555665 455555 789999999999
Q ss_pred hhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCC----ChH
Q 024016 159 GSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGK----HPG 230 (274)
Q Consensus 159 ~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 230 (274)
+.+|+. +++++......+.++ .+.+++..+.++.|+ +++.|+|++.+.+++..+..++..+-. ... ...
T Consensus 154 ~~~g~~i~~~G~~G~g~~~Kl~--~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~-~~p~~~~~~~ 230 (300)
T 3obb_A 154 EAMGRNIFHAGPDGAGQVAKVC--NNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEV-YNPWPGVMEN 230 (300)
T ss_dssp HHHEEEEEEEESTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHH-CCCSTTTSTT
T ss_pred HHhCCCEEEeCCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHHh-hccccchhhh
Confidence 999975 788876555555543 345555566667665 569999999999999877765544322 221 123
Q ss_pred HHHHhcCCCCchHHHHHHH-------HHhCCHHHHHHHHHHHHHHHHhhc
Q 024016 231 QLKDDVASPGGTTIAGIHE-------LEKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 231 ~~~~~~~~~~g~t~~~l~~-------l~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
.+....++|++.....++. .++.+++..+.+.+.+.|+++.+.
T Consensus 231 ~~~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~a~~~~~~a~~~ 280 (300)
T 3obb_A 231 APASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLKQ 280 (300)
T ss_dssp SGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHT
T ss_pred ccccccCCccchHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhC
Confidence 3456667898887766544 344577777888888888888764
No 14
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.96 E-value=1.7e-29 Score=219.94 Aligned_cols=246 Identities=15% Similarity=0.133 Sum_probs=186.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhcc----CCCEEEEeeCcccHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE----YSDVVVFSVKPQVVK 85 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~----~aDiIil~v~~~~~~ 85 (274)
.+||+|||+|+||++|+++|.++|+ +|++| ||++++.+.+.+.|+....++.++++ ++|+||+|||++.+.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~----~V~~~-dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~ 82 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANH----SVFGY-NRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAID 82 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHH
Confidence 3689999999999999999999999 99999 99999998888889877777777665 479999999999999
Q ss_pred HHHHHhccccCCCCEEEEecCCCCHH---HHHHhhCCCceEEEcCCcHHh----------hcCC-ceEEecCCCCCHH--
Q 024016 86 DVAMQIRPLLSRKKLLVSVAAGVKLK---DLQEWTGHSRFIRVMPNTPSA----------VGEA-ATVMSLGGTATEE-- 149 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~g~~~~---~l~~~~~~~~~~~~~p~~~~~----------~~~g-~~~i~~~~~~~~~-- 149 (274)
+++.++.+. +++++|+++ ++++.. .+++.+++.+++..||....+ ...| .+++++++..+++
T Consensus 83 ~vl~~l~~~-~~~~iv~Dv-~Svk~~i~~~~~~~~~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~ 160 (341)
T 3ktd_A 83 SLLDAVHTH-APNNGFTDV-VSVKTAVYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDI 160 (341)
T ss_dssp HHHHHHHHH-CTTCCEEEC-CSCSHHHHHHHHHTTCGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCC
T ss_pred HHHHHHHcc-CCCCEEEEc-CCCChHHHHHHHHhCCCCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhh
Confidence 999998886 788877765 556654 444444434566556542111 0122 3566766555667
Q ss_pred ------HHHHHHHHhhhcCC-eEEcCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Q 024016 150 ------DGELIGKLFGSVGK-IWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMV 222 (274)
Q Consensus 150 ------~~~~v~~ll~~~g~-~~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~ 222 (274)
.++.++++|+.+|. ++++++++||.++++++++|++++.. |...... +.+.+..+..++|++.++++
T Consensus 161 ~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~a---L~~~~~~---~~~~~~~laa~gfrd~tRia 234 (341)
T 3ktd_A 161 NSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAET---LAIVGDN---GGALSLSLAAGSYRDSTRVA 234 (341)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHH---HHHHHHH---THHHHHHHCCHHHHHHTGGG
T ss_pred ccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHHH---HHHHhhc---chHHHHHHccccHHHHHHHh
Confidence 89999999999995 58899999999999999999988663 3333332 34677889999999999886
Q ss_pred HhcCCChHHHHHhcCCCCchHHHHHHHHHhC--CHHHHHHH---HHHHHHHHHh
Q 024016 223 TKSGKHPGQLKDDVASPGGTTIAGIHELEKS--GFRGILMN---AVVAAAKRSR 271 (274)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~g~t~~~l~~l~~~--~~~~~~~~---a~~~~~~r~~ 271 (274)
. .+|.+|.+.+.+|.+.+.+.|+.+++. .+...+.+ .+.+.+++++
T Consensus 235 ~---s~p~lw~di~~~N~~~~~~~l~~~~~~L~~l~~~l~~~d~~l~~~~~~~~ 285 (341)
T 3ktd_A 235 G---TDPGLVRAMCESNAGPLVKALDEALAILHEAREGLTAEQPNIEQLADNGY 285 (341)
T ss_dssp G---SCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred c---CCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 4 689999999999998888888888664 34443332 3444454444
No 15
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.95 E-value=7e-27 Score=200.59 Aligned_cols=249 Identities=13% Similarity=0.198 Sum_probs=174.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cHHHHH-
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKDVA- 88 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~~~v~- 88 (274)
+||||||+|+||.+||++|+++|| +|++| ||++++.+.+.+.|+..++++.|+++++|+||+|+|++ ++++++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~----~V~v~-dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~ 80 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGY----ELVVW-NRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFS 80 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----EEEEC--------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSC
T ss_pred CcEEEEecHHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHH
Confidence 489999999999999999999999 99999 99999999999999999999999999999999999865 456655
Q ss_pred HHhccccCCCCEEEEecCCCCHHH---HHHhhC--CCceEEE-cCCcHHhhcCCc-eEEecCCCCCHHHHHHHHHHhhhc
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKLKD---LQEWTG--HSRFIRV-MPNTPSAVGEAA-TVMSLGGTATEEDGELIGKLFGSV 161 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~~~---l~~~~~--~~~~~~~-~p~~~~~~~~g~-~~i~~~~~~~~~~~~~v~~ll~~~ 161 (274)
.++.+.+++++++|+++ +++++. +.+.+. +..++.. +...|.....|. ++++.+ +++.+++++++|+.+
T Consensus 81 ~~~~~~~~~~~iiid~s-T~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG---~~~~~~~~~~~l~~~ 156 (297)
T 4gbj_A 81 MELVEKLGKDGVHVSMS-TISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSG---NAGAKERIKPIVENF 156 (297)
T ss_dssp HHHHHHHCTTCEEEECS-CCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEE---CHHHHHHHHHHHHTT
T ss_pred HHHHhhcCCCeEEEECC-CCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeeccc---chhHHHHHHHHHHHh
Confidence 45777788999999874 455543 333332 3344432 223444445555 444444 689999999999999
Q ss_pred CCe-EEcCcc-chhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhc
Q 024016 162 GKI-WRADEK-LFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDV 236 (274)
Q Consensus 162 g~~-~~~~e~-~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (274)
|+. +++++. .....+.++ .+.+.+..+.++.|+ +++.|+|++.+++++..+..++..+ .. ....+.+..
T Consensus 157 g~~i~~~g~~~G~g~~~Kl~--~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~-~~---~~~~~~~~~ 230 (297)
T 4gbj_A 157 VKGVFDFGDDPGAANVIKLA--GNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIF-QN---YGKLVASNT 230 (297)
T ss_dssp CSEEEECCSCTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHH-HH---HHHHHHHTC
T ss_pred hCCeEEecCCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchh-hc---cCccccCCC
Confidence 975 777753 344444443 355556666677776 5799999999999998877655433 21 234555566
Q ss_pred CCC-CchHHHHHHH-------HHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 237 ASP-GGTTIAGIHE-------LEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 237 ~~~-~g~t~~~l~~-------l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
+.| ++.....++. .++.+++..+.+++++.|+++.+.|
T Consensus 231 ~~p~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~a~~~G 276 (297)
T 4gbj_A 231 YEPVAFRFPLGLKDINLTLQTASDVNAPMPFADIIRNRFISGLAKG 276 (297)
T ss_dssp CCSCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCccchhHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhCC
Confidence 665 6666655443 4556888888899999998887643
No 16
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.94 E-value=8.5e-27 Score=207.03 Aligned_cols=218 Identities=17% Similarity=0.188 Sum_probs=175.9
Q ss_pred CC-CeEEEEcccHHHHHHHHHHHhC------CCCCCCcEEEEeCCC-HHHHHHHHHcCcee----ccCchhhccCCCEEE
Q 024016 9 ES-FILGFIGAGKMAESIAKGVAKS------GVLPPDRICTAVHSN-LKRRDAFESIGVKV----LSDNNAVVEYSDVVV 76 (274)
Q Consensus 9 ~~-~~IgiIG~G~mG~~~a~~L~~~------g~~~~~~v~v~~~r~-~~~~~~l~~~g~~~----~~~~~~~~~~aDiIi 76 (274)
+. +||||||+|+||.+++++|.++ |+ +|+++ +|+ +...+...+.|+.. ..++.+++++||+||
T Consensus 52 ~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~----~ViVg-~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVI 126 (525)
T 3fr7_A 52 KGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDI----VVKIG-LRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVL 126 (525)
T ss_dssp TTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCC----EEEEE-ECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEE
T ss_pred cCCCEEEEEeEhHHHHHHHHHHHhcccccCCCC----EEEEE-eCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEE
Confidence 44 7999999999999999999999 98 88877 554 34455555678765 257789999999999
Q ss_pred EeeCcccHHHHHHHhccccCCCCEEEEecCCCCHHHHHH---hhC-CCceEEEcCCcHHhh-------c-----CCce-E
Q 024016 77 FSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQE---WTG-HSRFIRVMPNTPSAV-------G-----EAAT-V 139 (274)
Q Consensus 77 l~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~---~~~-~~~~~~~~p~~~~~~-------~-----~g~~-~ 139 (274)
+++|++...+++.++.+.+++|++ |+++.|+++..+++ .++ +.+++++||+.|... + +|.+ .
T Consensus 127 LaVP~~~~~eVl~eI~p~LK~GaI-Ls~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~l 205 (525)
T 3fr7_A 127 LLISDAAQADNYEKIFSHMKPNSI-LGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 205 (525)
T ss_dssp ECSCHHHHHHHHHHHHHHSCTTCE-EEESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEE
T ss_pred ECCChHHHHHHHHHHHHhcCCCCe-EEEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccCCccEE
Confidence 999999988999999999999987 68889999888875 344 578999999999876 4 6777 5
Q ss_pred EecCCCCCHHHHHHHHHHhhhcCCeEE--c------CccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 024016 140 MSLGGTATEEDGELIGKLFGSVGKIWR--A------DEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLA 211 (274)
Q Consensus 140 i~~~~~~~~~~~~~v~~ll~~~g~~~~--~------~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~ 211 (274)
++...+.+.+..+.+..++..+|.... . .++.++..++++|++|+|+ +++.|++++.|+++++|+.+.
T Consensus 206 iAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqtvLsG~~pAli----eA~~d~lVe~G~~pe~Ay~~~ 281 (525)
T 3fr7_A 206 FAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIV----EALFRRYTEQGMDEEMAYKNT 281 (525)
T ss_dssp EEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHTTTTHHHHHHH----HHHHHHHHHTTCCHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHhhhcCcHHHHH----HHHHHHHHHcCCCHHHHHHHH
Confidence 555556677899999999999997522 1 1346777788999988864 788899999999999999999
Q ss_pred HHHHH-HHHHHHHhcCCChHHHHHhcCC
Q 024016 212 SQTVL-GAASMVTKSGKHPGQLKDDVAS 238 (274)
Q Consensus 212 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 238 (274)
.+.+. +...++.+.|. ..+.+.++.
T Consensus 282 ~qel~~~i~~li~e~G~--~~m~~~~S~ 307 (525)
T 3fr7_A 282 VEGITGIISKTISKKGM--LEVYNSLTE 307 (525)
T ss_dssp HHHHHTHHHHHHHHHCH--HHHHHTSCH
T ss_pred HHHHHHHHHHHHHHhHH--HHHHHHcCc
Confidence 99988 89999987663 345555543
No 17
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.94 E-value=3.1e-25 Score=191.47 Aligned_cols=252 Identities=17% Similarity=0.205 Sum_probs=179.5
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-
Q 024016 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ- 82 (274)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~- 82 (274)
|.....++||+|||+|+||.+|+++|.++|+ +|++| ||++++.+.+.+.|+...+++.++++++|+||+|+|+.
T Consensus 3 m~~~~~~~~IgiIG~G~mG~~~A~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~ 77 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMGTIMAQVLLKQGK----RVAIW-NRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNH 77 (306)
T ss_dssp CCCCCCSCSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHH
T ss_pred CCcccCCCeEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHH
Confidence 4455567899999999999999999999999 99999 99999999998889988889999999999999999965
Q ss_pred cHHHHHH--HhccccCCCCEEEEecCCCCH--HHHHHhhC--CCceEEEcCC--cHHhhcC-CceEEecCCCCCHHHHHH
Q 024016 83 VVKDVAM--QIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPN--TPSAVGE-AATVMSLGGTATEEDGEL 153 (274)
Q Consensus 83 ~~~~v~~--~i~~~l~~~~~vis~~~g~~~--~~l~~~~~--~~~~~~~~p~--~~~~~~~-g~~~i~~~~~~~~~~~~~ 153 (274)
.+++++. .+.+ +.++++||++++..+. ..+.+.+. +..++.. |. .|...+. +.++++.+ +++.+++
T Consensus 78 ~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda-pv~g~~~~~~~~~~~i~~gg---~~~~~~~ 152 (306)
T 3l6d_A 78 ATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG-MIVAYPRNVGHRESHSIHTG---DREAFEQ 152 (306)
T ss_dssp HHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE-EEESCGGGTTCTTCEEEEEE---CHHHHHH
T ss_pred HHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec-ccccCcccccCCceEEEEcC---CHHHHHH
Confidence 5888886 5644 5689999987554332 34444442 3445543 21 2222333 34555554 6899999
Q ss_pred HHHHhhhcCC-eEEc--Ccc-chhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHH-HHHHHHHhc
Q 024016 154 IGKLFGSVGK-IWRA--DEK-LFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVL-GAASMVTKS 225 (274)
Q Consensus 154 v~~ll~~~g~-~~~~--~e~-~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~-~~~~~~~~~ 225 (274)
++++|+.+|. ++++ +++ ....... .+++..+..+.|+ +++.|++++.+.+++..+.. +..+++...
T Consensus 153 ~~~ll~~lg~~~~~~~~g~~~g~g~~~k------~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~ 226 (306)
T 3l6d_A 153 HRALLEGLAGHTVFLPWDEALAFATVLH------AHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVADALEEA 226 (306)
T ss_dssp HHHHHHTTCSEEEECCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEecCCCCccHHHHHH------HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccHHHHHH
Confidence 9999999964 5778 642 1111111 2223334455554 57999999999999998864 444554421
Q ss_pred CCChHHHHHhcCCCCchHHH--------HHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 226 GKHPGQLKDDVASPGGTTIA--------GIHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 226 ~~~~~~~~~~~~~~~g~t~~--------~l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
...+.+..++|++++.. .++..++.+++..+.+++.+.|+++.+.+
T Consensus 227 ---~~~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g 280 (306)
T 3l6d_A 227 ---VRRLETQDFKGDQARLDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQRAAAMG 280 (306)
T ss_dssp ---HHHHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTT
T ss_pred ---HHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcC
Confidence 33556666788764332 35567778999999999999999988753
No 18
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.94 E-value=6.9e-25 Score=189.05 Aligned_cols=251 Identities=12% Similarity=0.145 Sum_probs=178.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-ccCchhhccCCCEEEEeeCc-ccHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LSDNNAVVEYSDVVVFSVKP-QVVKD 86 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-~~~~~~~~~~aDiIil~v~~-~~~~~ 86 (274)
++|||+|||+|+||.+|+.+|.++|+ +|++| ||++++.+.+.+.|... .+++.++++++|+||+|||+ +.++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~ 80 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGL----STWGA-DLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQ 80 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC----eEEEE-ECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHH
Confidence 45799999999999999999999999 99999 99999999999888876 78889999999999999997 47888
Q ss_pred HH---HHhccccCCCCEEEEecCCCCHH---HHHHhhC--CCceEEEcC--CcHHhhcCCceEEecCCCCCHHHHHHHHH
Q 024016 87 VA---MQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMP--NTPSAVGEAATVMSLGGTATEEDGELIGK 156 (274)
Q Consensus 87 v~---~~i~~~l~~~~~vis~~~g~~~~---~l~~~~~--~~~~~~~~p--~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ 156 (274)
++ +++.+.++++++||++++ +.+. .+.+.+. +..++. +| ..|.....|...+..+ .+++.++++++
T Consensus 81 v~~~~~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~~~g--g~~~~~~~~~~ 156 (303)
T 3g0o_A 81 VLFGEDGVAHLMKPGSAVMVSST-ISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMTVMAS--GSEAAFTRLKP 156 (303)
T ss_dssp HHC--CCCGGGSCTTCEEEECSC-CCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEEEEEE--CCHHHHHHHHH
T ss_pred HHhChhhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeEEEeC--CCHHHHHHHHH
Confidence 88 778888899999998754 4443 3444443 234444 44 3444455665443333 26889999999
Q ss_pred HhhhcCCe-EEcCc-cchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 024016 157 LFGSVGKI-WRADE-KLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQ 231 (274)
Q Consensus 157 ll~~~g~~-~~~~e-~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (274)
+|+.+|.. +++++ ........+. .+.+.+..+..+.|+ +++.|++++++.+++..+..++..+ .. ..+ .
T Consensus 157 ll~~~g~~~~~~~~~~g~a~~~Kl~--~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~-~~--~~~-~ 230 (303)
T 3g0o_A 157 VLDAVASNVYRISDTPGAGSTVKII--HQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMF-EN--RMQ-H 230 (303)
T ss_dssp HHHHHEEEEEEEESSTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHH-HH--HHH-H
T ss_pred HHHHHCCCEEECCCCCcHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccCCHHH-Hh--hhH-H
Confidence 99999965 67765 3333333332 233433444445554 5789999999999887654333221 11 112 3
Q ss_pred HHHhcCCCCchHHHH-------HHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 232 LKDDVASPGGTTIAG-------IHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 232 ~~~~~~~~~g~t~~~-------l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
+.+..+.|++..... ++..++.|++..+.+++.+.|+++.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g 280 (303)
T 3g0o_A 231 VVDGDYTPRSAVDIFVKDLGLVADTAKALRFPLPLASTALNMFTSASNAG 280 (303)
T ss_dssp HHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTT
T ss_pred HhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcC
Confidence 344556787766554 4445777888899999999999987653
No 19
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.94 E-value=7.7e-25 Score=189.32 Aligned_cols=251 Identities=15% Similarity=0.190 Sum_probs=180.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccHH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~~ 85 (274)
..++|||+|||+|+||.+|+++|.++|| +|++| ||++++.+.+.+.|+...+++.++++++|+||+|||. .+++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~----~V~~~-dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~ 92 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGF----KVTVW-NRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAAL 92 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHH
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHH
Confidence 3456899999999999999999999999 99999 9999999999999999888999999999999999985 5789
Q ss_pred HHH---HHhccccCCCCEEEEecCCCCHH---HHHHhhC--CCceEEEcC--CcHHhhcCCce-EEecCCCCCHHHHHHH
Q 024016 86 DVA---MQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMP--NTPSAVGEAAT-VMSLGGTATEEDGELI 154 (274)
Q Consensus 86 ~v~---~~i~~~l~~~~~vis~~~g~~~~---~l~~~~~--~~~~~~~~p--~~~~~~~~g~~-~i~~~~~~~~~~~~~v 154 (274)
+++ .++.+.++++++||+++ ++++. .+.+.+. +..++. +| ..+.....|.. +++.+ +++.++.+
T Consensus 93 ~v~~~~~~l~~~l~~g~~vv~~s-t~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~l~i~~gg---~~~~~~~~ 167 (310)
T 3doj_A 93 SVVFDKGGVLEQICEGKGYIDMS-TVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQLIILAAG---DKALFEES 167 (310)
T ss_dssp HHHHSTTCGGGGCCTTCEEEECS-CCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEEEEEE---CHHHHHHH
T ss_pred HHHhCchhhhhccCCCCEEEECC-CCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCCeEEEEcC---CHHHHHHH
Confidence 998 78888889999999875 44443 3333332 233433 33 23333344554 44444 68899999
Q ss_pred HHHhhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChH
Q 024016 155 GKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPG 230 (274)
Q Consensus 155 ~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (274)
+++|+.+|.. +++++......+.++ .+.+.+..+..+.|+ +.+.|++++++.+++..+...+.. ... ...
T Consensus 168 ~~ll~~~g~~~~~~g~~g~a~~~Kl~--~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~-~~~---~~~ 241 (310)
T 3doj_A 168 IPAFDVLGKRSFYLGQVGNGAKMKLI--VNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPM-FKG---KGP 241 (310)
T ss_dssp HHHHHHHEEEEEECSSTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTCCHH-HHH---HHH
T ss_pred HHHHHHhCCCEEEeCCcCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHH-HHH---Hhh
Confidence 9999999965 778765444444443 344544445555555 568999999999988765332221 111 123
Q ss_pred HHHHhcCCCCchHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHhhc
Q 024016 231 QLKDDVASPGGTTIAGIHEL-------EKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 231 ~~~~~~~~~~g~t~~~l~~l-------~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
.+.+..+.|++......+.+ ++.++...+.+++.+.|+++.+.
T Consensus 242 ~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 291 (310)
T 3doj_A 242 SMNKSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARSL 291 (310)
T ss_dssp HHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred hhhcCCCCCCccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHc
Confidence 44555567887666554443 66788888999999999988764
No 20
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.93 E-value=1.8e-25 Score=195.34 Aligned_cols=220 Identities=20% Similarity=0.219 Sum_probs=166.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHH-HHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKR-RDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~-~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
+.+||+|||+|+||++++.+|.+.|+ +|++| +|++++ .+.+.+.|+... ++.+++++||+||+|||++...++
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~~G~----~V~~~-~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~~~~v 88 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKDSGV----DVTVG-LRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEFQGRL 88 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-CCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHHHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHHCcC----EEEEE-ECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHHHHHH
Confidence 45799999999999999999999998 99999 998766 455555788765 777888999999999999999999
Q ss_pred HH-HhccccCCCCEEEEecCCCCHHHHHHhh-C-CCceEEEcCCcHHh-------hcCCceEE-ecCCCCCHHHHHHHHH
Q 024016 88 AM-QIRPLLSRKKLLVSVAAGVKLKDLQEWT-G-HSRFIRVMPNTPSA-------VGEAATVM-SLGGTATEEDGELIGK 156 (274)
Q Consensus 88 ~~-~i~~~l~~~~~vis~~~g~~~~~l~~~~-~-~~~~~~~~p~~~~~-------~~~g~~~i-~~~~~~~~~~~~~v~~ 156 (274)
+. ++.+.++++++|+++ +|++. .+.... + +..+++.||+.|.. .+.|...+ ++....+.+..+.+..
T Consensus 89 ~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~ 166 (338)
T 1np3_A 89 YKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALS 166 (338)
T ss_dssp HHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHH
T ss_pred HHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHH
Confidence 98 999989999998875 66654 443333 2 34588899987754 34466554 5554556788899999
Q ss_pred HhhhcCC----eEEcCccc---hhhH---HHhhcchHHHHHHHHHHHHHHHHHcCCCHHHH-------HHHHHHH-HHHH
Q 024016 157 LFGSVGK----IWRADEKL---FDAI---TGLSGSGPAYIFLAIEALADGGVAAGLPRELA-------LGLASQT-VLGA 218 (274)
Q Consensus 157 ll~~~g~----~~~~~e~~---~~~~---~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~-------~~~~~~~-~~~~ 218 (274)
+++.+|. ++.++... ++.+ ++++|++|++++..++. +.+.|++++.+ .+++.++ ..|.
T Consensus 167 l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~----l~~~Gl~~~~a~~e~~~~~~~~~~~~~~gg 242 (338)
T 1np3_A 167 YACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFET----LVEAGYAPEMAYFECLHELKLIVDLMYEGG 242 (338)
T ss_dssp HHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHH----HHHTTCCHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred HHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHH----HHHcCCCHHHHHHHhhhHHHHHHHHHHhcC
Confidence 9999997 45565433 3444 35666688887665544 45789999887 6777777 4555
Q ss_pred HHHHHhcCCChHHHHHhcCCCC
Q 024016 219 ASMVTKSGKHPGQLKDDVASPG 240 (274)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~ 240 (274)
.+.++..+.+|.+|.+.+++|+
T Consensus 243 ~~~~r~a~s~p~~~~d~~~~~~ 264 (338)
T 1np3_A 243 IANMNYSISNNAEYGEYVTGPE 264 (338)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHhhhhcCCc
Confidence 3333666789999999998887
No 21
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.93 E-value=5.4e-25 Score=190.80 Aligned_cols=251 Identities=18% Similarity=0.189 Sum_probs=183.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~~v 87 (274)
..|||+|||+|+||..++..|.+.|+ +|++| +|++++.+.+.+.|+....++.++++++|+||+|+| +..++++
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v 103 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGH----TVTVW-NRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDL 103 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHH
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHH
Confidence 45899999999999999999999998 99999 999999998888888887788888889999999999 7889999
Q ss_pred HHHh---ccccCCCCEEEEecCCCC--HHHHHHhhC--CCceEEE-cCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhh
Q 024016 88 AMQI---RPLLSRKKLLVSVAAGVK--LKDLQEWTG--HSRFIRV-MPNTPSAVGEAATVMSLGGTATEEDGELIGKLFG 159 (274)
Q Consensus 88 ~~~i---~~~l~~~~~vis~~~g~~--~~~l~~~~~--~~~~~~~-~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~ 159 (274)
+.++ .+.+.++++||+++++.+ .+.+.+.++ +..++.. +++.+...+.|.+.++.+. +++..+.++++|+
T Consensus 104 ~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g--~~~~~~~v~~ll~ 181 (316)
T 2uyy_A 104 VLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAG--DRGLYEDCSSCFQ 181 (316)
T ss_dssp HHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEE--CHHHHHHTHHHHH
T ss_pred HcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCC--CHHHHHHHHHHHH
Confidence 8764 367789999998866432 234555553 3344432 3444555566665444222 5788999999999
Q ss_pred hcCCe-EEcCccch-----hhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 024016 160 SVGKI-WRADEKLF-----DAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLK 233 (274)
Q Consensus 160 ~~g~~-~~~~e~~~-----~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (274)
.+|.. +++++... ...+++. ..++..+.|++.. +++.|++++++.+++..+..++..+... .+..+.
T Consensus 182 ~~g~~~~~~~~~~~~~~~K~~~n~~~---~~~~~~~~Ea~~l-a~~~G~~~~~~~~~~~~~~~~s~~~~~~---~~~~l~ 254 (316)
T 2uyy_A 182 AMGKTSFFLGEVGNAAKMMLIVNMVQ---GSFMATIAEGLTL-AQVTGQSQQTLLDILNQGQLASIFLDQK---CQNILQ 254 (316)
T ss_dssp HHEEEEEECSSTTHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHHTTCCHHHHHHHHHHSTTCCHHHHHH---HHHHHH
T ss_pred HhcCCEEEeCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHHcCCCHHHHHHHHHcCCCCCHHHHHh---hHHhhc
Confidence 99965 66655221 1122221 1234455555554 7799999999999888776554444321 344555
Q ss_pred HhcCCCCchHHH-------HHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 234 DDVASPGGTTIA-------GIHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 234 ~~~~~~~g~t~~-------~l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
++ ++|++.++. .++..++.|++..+.+++.+.++++++++
T Consensus 255 ~~-~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~g 301 (316)
T 2uyy_A 255 GN-FKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALD 301 (316)
T ss_dssp TC-CCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTT
T ss_pred CC-CCCCCcHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcC
Confidence 54 688888877 56667888999999999999999998864
No 22
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.93 E-value=4.5e-25 Score=188.81 Aligned_cols=248 Identities=16% Similarity=0.171 Sum_probs=180.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cHHHHH-
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKDVA- 88 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~~~v~- 88 (274)
+||+|||+|+||.+|+++|.++|| +|++| ||++++.+.+.+.|+...+++.++++++|+||+|+|+. ++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~ 76 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF----DVTVW-NRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCF 76 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC----CEEEE-CSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC----eEEEE-cCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHc
Confidence 689999999999999999999999 99999 99999999999889988889999999999999999975 789998
Q ss_pred --HHhccccCCCCEEEEecCCCCHH---HHHHhhC--CCceEEEcC--CcHHhhcCCc-eEEecCCCCCHHHHHHHHHHh
Q 024016 89 --MQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMP--NTPSAVGEAA-TVMSLGGTATEEDGELIGKLF 158 (274)
Q Consensus 89 --~~i~~~l~~~~~vis~~~g~~~~---~l~~~~~--~~~~~~~~p--~~~~~~~~g~-~~i~~~~~~~~~~~~~v~~ll 158 (274)
.++.+.+++++++|++++ ..+. .+.+.+. +..++.. | ..|.....|. ++++.+ +++.+++++++|
T Consensus 77 ~~~~l~~~l~~g~~vv~~st-~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll 151 (287)
T 3pdu_A 77 GANGVLEGIGGGRGYIDMST-VDDETSTAIGAAVTARGGRFLEA-PVSGTKKPAEDGTLIILAAG---DQSLFTDAGPAF 151 (287)
T ss_dssp STTCGGGTCCTTCEEEECSC-CCHHHHHHHHHHHHHTTCEEEEC-CEECCHHHHHHTCEEEEEEE---CHHHHHHTHHHH
T ss_pred CchhhhhcccCCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEEC-CccCCHHHHhcCCEEEEEeC---CHHHHHHHHHHH
Confidence 788888889999998755 4443 3333332 2334432 3 2344445555 344443 688999999999
Q ss_pred hhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 024016 159 GSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKD 234 (274)
Q Consensus 159 ~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (274)
+.+|.. +++++........+. .+.+.+..+..+.|+ +++.|++++++.+++..+...+. +.... ...+.+
T Consensus 152 ~~~g~~~~~~g~~g~~~~~Kl~--~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~-~~~~~---~~~~~~ 225 (287)
T 3pdu_A 152 AALGKKCLHLGEVGQGARMKLV--VNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANP-MFKGK---GQMLLS 225 (287)
T ss_dssp HHHEEEEEECSSTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCH-HHHHH---HHHHHH
T ss_pred HHhCCCEEEcCCCChHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccCh-HHHhh---cccccc
Confidence 999975 777764444444433 244455555556665 56899999999999887643332 22211 234555
Q ss_pred hcCCCCchHHHHH-------HHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 235 DVASPGGTTIAGI-------HELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 235 ~~~~~~g~t~~~l-------~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
..+.|++...... +..++.|++..+.+++.+.|+++.+.+
T Consensus 226 ~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g 272 (287)
T 3pdu_A 226 GEFPTSFPLKHMQKDLRLAVELGDRLGQPLHGAATANESFKRARAAG 272 (287)
T ss_dssp TCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcC
Confidence 5568888766543 344666888889999999999987753
No 23
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.93 E-value=1.3e-25 Score=192.82 Aligned_cols=251 Identities=16% Similarity=0.168 Sum_probs=184.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~~~v 87 (274)
++|||+|||+|+||..++.+|.+.|+ +|++| + ++++.+.+.+.|+....++.++++++|+||+|+|.. +++++
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v 75 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARAGH----QLHVT-T-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDV 75 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHTTC----EEEEC-C-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCC----EEEEE-c-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHH
Confidence 34799999999999999999999999 99999 9 888888888778877778888889999999999755 48888
Q ss_pred HH---HhccccCCCCEEEEecCCCC--HHHHHHhhCCCceEEEc--CC--cHHhhcCCceEEecCCCCCHHHHHHHHHHh
Q 024016 88 AM---QIRPLLSRKKLLVSVAAGVK--LKDLQEWTGHSRFIRVM--PN--TPSAVGEAATVMSLGGTATEEDGELIGKLF 158 (274)
Q Consensus 88 ~~---~i~~~l~~~~~vis~~~g~~--~~~l~~~~~~~~~~~~~--p~--~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll 158 (274)
+. ++.+.++++++||+++++.+ .+.+.+.++. ..++++ |. .|.....|...++.+. +++..+.++++|
T Consensus 76 ~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~-~g~~~~~~p~~~~~~~a~~g~~~~~~~~--~~~~~~~~~~ll 152 (295)
T 1yb4_A 76 LFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNE-MGADYLDAPVSGGEIGAREGTLSIMVGG--EQKVFDRVKPLF 152 (295)
T ss_dssp HHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHT-TTEEEEECCEESHHHHHHHTCEEEEEES--CHHHHHHHHHHH
T ss_pred HhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHH-cCCeEEEccCCCCHHHHHcCCeEEEECC--CHHHHHHHHHHH
Confidence 87 78788889999998877643 3456555542 122222 22 1222234553333332 688899999999
Q ss_pred hhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 024016 159 GSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKD 234 (274)
Q Consensus 159 ~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (274)
+.+|.. +++++........+.. +.+.+.+...+.|+ +++.|++++++.+++..+..++..+.. .+..+.+
T Consensus 153 ~~~g~~~~~~~~~~~~~~~Kl~~--n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~----~~~~~~~ 226 (295)
T 1yb4_A 153 DILGKNITLVGGNGDGQTCKVAN--QIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRILEV----HGERMIN 226 (295)
T ss_dssp HHHEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHHHHH----HHHHHHT
T ss_pred HHhcCCEEEeCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHH----hhHHHhc
Confidence 999975 6666655555544432 34445555666666 779999999988888776644432221 3456677
Q ss_pred hcCCCCchHHH-------HHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 235 DVASPGGTTIA-------GIHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 235 ~~~~~~g~t~~-------~l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
+.++|++.++. .++..++.|++..+.+++.+.++|+.+++
T Consensus 227 ~~~~~g~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g 273 (295)
T 1yb4_A 227 RTFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANG 273 (295)
T ss_dssp TCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcC
Confidence 77899999987 78888999999999999999999998764
No 24
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.93 E-value=3.8e-25 Score=190.25 Aligned_cols=250 Identities=18% Similarity=0.226 Sum_probs=183.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHHHHH-
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDVA- 88 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~~v~- 88 (274)
|||+|||+|.||..++..|.+.|+ +|++| +|++++.+.+.+.|+....++.++++++|+||+|+| +.++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~ 80 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY----SLVVS-DRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVAL 80 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHh
Confidence 699999999999999999999998 99999 999999998888888888888888889999999999 66788888
Q ss_pred --HHhccccCCCCEEEEecCCCC--HHHHHHhhC--CCceEEE--cCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhhh
Q 024016 89 --MQIRPLLSRKKLLVSVAAGVK--LKDLQEWTG--HSRFIRV--MPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGS 160 (274)
Q Consensus 89 --~~i~~~l~~~~~vis~~~g~~--~~~l~~~~~--~~~~~~~--~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~ 160 (274)
+++.+.++++++||+++++.+ .+.+.+.++ +..++.. +++.+.....+.++++.+ +++..+.++++|+.
T Consensus 81 ~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~ 157 (299)
T 1vpd_A 81 GENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGG---DKAIFDKYYDLMKA 157 (299)
T ss_dssp STTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEES---CHHHHHHHHHHHHT
T ss_pred CcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCC---CHHHHHHHHHHHHH
Confidence 677788889999999877764 346666554 2334332 233343333444555544 68889999999999
Q ss_pred cCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhc
Q 024016 161 VGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDV 236 (274)
Q Consensus 161 ~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (274)
+|.. ++.++........+. .+.+.+.+...+.|+ +++.|++++++.+++..+..++..+.. ..+..+.+.
T Consensus 158 ~g~~~~~~~~~~~~~~~Kl~--~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~---~~~~~l~~~- 231 (299)
T 1vpd_A 158 MAGSVVHTGDIGAGNVTKLA--NQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDA---KAPMVMDRN- 231 (299)
T ss_dssp TEEEEEEEESTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHH---HHHHHHTTC-
T ss_pred HcCCeEEeCCcCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHHHH---hhhHhhcCC-
Confidence 9965 666665555555543 245555666677776 679999999998888776544433221 134445444
Q ss_pred CCCCchHHHH-------HHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 237 ASPGGTTIAG-------IHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 237 ~~~~g~t~~~-------l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
++|++..+.. ++..++.++...+.+++.+.++++.+.+
T Consensus 232 ~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g 276 (299)
T 1vpd_A 232 FKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADG 276 (299)
T ss_dssp CCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcC
Confidence 4777655442 3445667888889999999999888753
No 25
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.93 E-value=3.6e-25 Score=188.37 Aligned_cols=231 Identities=14% Similarity=0.133 Sum_probs=161.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v-~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
+|||+|||+|+||.+|+++|.++ + +| .+| +|++++.+.+.+ .|. .+.++.++++++|+||+|||++.+.++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~----~v~~v~-~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~~~~v 74 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-Y----EIGYIL-SRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRYIKTV 74 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC---------CCCEE-CSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTTHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-C----cEEEEE-eCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHHHHHH
Confidence 36899999999999999999888 7 88 599 999999888875 576 666777888899999999999999999
Q ss_pred HHHhccccCCCCEEEEecCCCCHHHHHHhhCC-CceEEEcCCcHHhhc--CCceEEecCCCCCHHHHHHHHHHhhhcCC-
Q 024016 88 AMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGH-SRFIRVMPNTPSAVG--EAATVMSLGGTATEEDGELIGKLFGSVGK- 163 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~~-~~~~~~~p~~~~~~~--~g~~~i~~~~~~~~~~~~~v~~ll~~~g~- 163 (274)
+.++. .++++||+++++++.+.+++.... ......+|+.|.... .+......+ +++.++.++++|+.+|.
T Consensus 75 ~~~l~---~~~~ivi~~s~~~~~~~l~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~lG~~ 148 (276)
T 2i76_A 75 ANHLN---LGDAVLVHCSGFLSSEIFKKSGRASIHPNFSFSSLEKALEMKDQIVFGLEG---DERGLPIVKKIAEEISGK 148 (276)
T ss_dssp HTTTC---CSSCCEEECCSSSCGGGGCSSSEEEEEECSCC--CTTGGGCGGGCCEEECC---CTTTHHHHHHHHHHHCSC
T ss_pred HHHhc---cCCCEEEECCCCCcHHHHHHhhccccchhhhcCCCchhHHHhCCCeEEEEe---ChHHHHHHHHHHHHhCCC
Confidence 98875 578899998888887766543210 011112445444433 344343333 45678999999999995
Q ss_pred eEEcCccc---hhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCC
Q 024016 164 IWRADEKL---FDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPG 240 (274)
Q Consensus 164 ~~~~~e~~---~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (274)
+++++++. ++..++++++.+.++...+ .+.+.+.|++++++. +.+++.++..++.+.+ | .+.+++|.
T Consensus 149 ~~~v~~~~~~~~~~~~~l~~n~~~~~~~~a---~~~~~~~Gl~~~~a~--~~~l~~~~~~~~~~~g--p---~~~~tgP~ 218 (276)
T 2i76_A 149 YFVIPSEKKKAYHLAAVIASNFPVALAYLS---KRIYTLLGLDEPELL--IHTLMKGVADNIKKMR--V---ECSLTGPV 218 (276)
T ss_dssp EEECCGGGHHHHHHHHHHHHTTHHHHHHHH---HHHHHTTTCSCHHHH--HHHHHHHHHHHHHHSC--G---GGGCCSHH
T ss_pred EEEECHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHcCCChHHHH--HHHHHHHHHHHHHhcC--h---HhhCCCCc
Confidence 68888764 5666677776665543322 244677999998764 7788888888887765 4 77889998
Q ss_pred -----chHHHHHHHHHh--CC--HHHHHHHHH
Q 024016 241 -----GTTIAGIHELEK--SG--FRGILMNAV 263 (274)
Q Consensus 241 -----g~t~~~l~~l~~--~~--~~~~~~~a~ 263 (274)
++++.+++.|++ .+ +...+.+++
T Consensus 219 ~r~D~~t~~~~l~~l~~~~~~~~~y~~l~~~~ 250 (276)
T 2i76_A 219 KRGDWQVVEEERREYEKIFGNTVLYDEIVKLL 250 (276)
T ss_dssp HHTCHHHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhccCccHHHHHHHHHHH
Confidence 899999999987 35 444444443
No 26
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.93 E-value=5.8e-25 Score=189.44 Aligned_cols=253 Identities=15% Similarity=0.155 Sum_probs=181.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~~v 87 (274)
++|||+|||+|+||.+|+.+|.++|+ +|++| +|++++.+.+.+.|+...+++.++++++|+||+||| +.+++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v 76 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGY----LLNVF-DLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGL 76 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCC----eEEEE-cCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHH
Confidence 45799999999999999999999999 99999 999999999998999988899999999999999997 6678999
Q ss_pred HH---HhccccCCCCEEEEecCCCCH--HHHHHhhC--CCceEEEcCCcH--HhhcCCce-EEecCCCCCHHHHHHHHHH
Q 024016 88 AM---QIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPNTP--SAVGEAAT-VMSLGGTATEEDGELIGKL 157 (274)
Q Consensus 88 ~~---~i~~~l~~~~~vis~~~g~~~--~~l~~~~~--~~~~~~~~p~~~--~~~~~g~~-~i~~~~~~~~~~~~~v~~l 157 (274)
+. ++.+.++++++||++++.... +.+.+.++ +..++.. |..+ .....+.. .+..+ +++.++.++++
T Consensus 77 ~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~-pv~~~~~~~~~g~l~~~~~g---~~~~~~~~~~l 152 (302)
T 2h78_A 77 YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA-PVSGGTAGAAAGTLTFMVGG---DAEALEKARPL 152 (302)
T ss_dssp HHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC-CEESCHHHHHHTCEEEEEES---CHHHHHHHHHH
T ss_pred HcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE-EccCChhhHhcCCceEEeCC---CHHHHHHHHHH
Confidence 98 888888999999987544332 24555443 3455553 5432 22233443 33433 68999999999
Q ss_pred hhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCh----
Q 024016 158 FGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHP---- 229 (274)
Q Consensus 158 l~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 229 (274)
|+.+|.. +++++........+.. +.+....+..+.|+ +++.|++++++.+++..+...+.. +......|
T Consensus 153 l~~~g~~~~~~~~~~~~~~~Kl~~--n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~-~~~~~~~~g~~~ 229 (302)
T 2h78_A 153 FEAMGRNIFHAGPDGAGQVAKVCN--NQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWA-LEVYNPWPGVME 229 (302)
T ss_dssp HHHHEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHH-HHHCCCSTTTST
T ss_pred HHHhCCCeEEcCCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHH-HHHhCCCccccc
Confidence 9999964 7777666665555543 34444444445554 578999999999988876543332 22222111
Q ss_pred HHHHHhcCCCCchHHHH-------HHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024016 230 GQLKDDVASPGGTTIAG-------IHELEKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 230 ~~~~~~~~~~~g~t~~~-------l~~l~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
..+.+..+.|++..... ++..++.|+...+.+++.+.++++.+.
T Consensus 230 ~~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 280 (302)
T 2h78_A 230 NAPASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLKQ 280 (302)
T ss_dssp TSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhc
Confidence 13445556788775554 344466688888999999999988764
No 27
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.93 E-value=3.5e-24 Score=183.26 Aligned_cols=247 Identities=17% Similarity=0.200 Sum_probs=178.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHHHHH-
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDVA- 88 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~~v~- 88 (274)
|||+|||+|+||.+|+.+|.++|| +|++| ||++++.+.+.+.|+...+++.++++++|+||+||| ++.+++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~ 76 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC----SVTIW-NRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCF 76 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC----eEEEE-cCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHc
Confidence 699999999999999999999999 99999 999999999998999988899999999999999999 67899999
Q ss_pred --HHhccccCCCCEEEEecCCCCHHH---HHHhhC--CCceEEEcC--CcHHhhcCCc-eEEecCCCCCHHHHHHHHHHh
Q 024016 89 --MQIRPLLSRKKLLVSVAAGVKLKD---LQEWTG--HSRFIRVMP--NTPSAVGEAA-TVMSLGGTATEEDGELIGKLF 158 (274)
Q Consensus 89 --~~i~~~l~~~~~vis~~~g~~~~~---l~~~~~--~~~~~~~~p--~~~~~~~~g~-~~i~~~~~~~~~~~~~v~~ll 158 (274)
.++.+.++++++||++ +++++.. +.+.+. +..++. +| ..|.....|. ..++.+ +++.++.++++|
T Consensus 77 ~~~~l~~~l~~~~~vi~~-st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll 151 (287)
T 3pef_A 77 GKHGVLEGIGEGRGYVDM-STVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLIILAAG---DRNLYDEAMPGF 151 (287)
T ss_dssp STTCHHHHCCTTCEEEEC-SCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEEEEEE---CHHHHHHHHHHH
T ss_pred CcchHhhcCCCCCEEEeC-CCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEEEEeC---CHHHHHHHHHHH
Confidence 7888888999999987 4455443 333332 233433 34 2233334454 344443 688999999999
Q ss_pred hhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 024016 159 GSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKD 234 (274)
Q Consensus 159 ~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (274)
+.+|.. +++++........+.. +.+.+..+..+.|+ +++.|++++++.+++..+...+. +... ....+.+
T Consensus 152 ~~~g~~~~~~g~~g~~~~~Kl~~--N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~s~-~~~~---~~~~~~~ 225 (287)
T 3pef_A 152 EKMGKKIIHLGDVGKGAEMKLVV--NMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANP-MFAL---KGGLIRD 225 (287)
T ss_dssp HHHEEEEEECSSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCH-HHHH---HHHHHHT
T ss_pred HHhCCCeEEeCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccH-HHHH---Hhhhhhc
Confidence 999964 7787766665555543 34444444455554 56899999999999886543322 2221 1234445
Q ss_pred hcCCCCchHHHHHH-------HHHhCCHHHHHHHHHHHHHHHHhhc
Q 024016 235 DVASPGGTTIAGIH-------ELEKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 235 ~~~~~~g~t~~~l~-------~l~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
..+.|++......+ ..++.|+...+.+++.+.|+++.+.
T Consensus 226 ~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~ 271 (287)
T 3pef_A 226 RNFAPAFPLKHMQKDLRLAVALGDRVGQPLVASAAANELFKGARAA 271 (287)
T ss_dssp TCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHc
Confidence 55678876655443 3455578888889999999988764
No 28
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.93 E-value=4.4e-25 Score=188.80 Aligned_cols=246 Identities=15% Similarity=0.117 Sum_probs=181.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cHHHHHH
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVKDVAM 89 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~~~v~~ 89 (274)
|||+|||+|+||..++..|.+ |+ +|++| +|++++.+.+.+.|+...+ +.++++++|+||+|+|+. .++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~----~V~~~-~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~~ 74 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF----PTLVW-NRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVAE 74 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS----CEEEE-CSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC----eEEEE-eCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHHH
Confidence 689999999999999999999 99 99999 9999999888877776655 778888999999999966 4889998
Q ss_pred HhccccCCCCEEEEecCCCC--HHHHHHhhC--CCceEEEcCC--cHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCC
Q 024016 90 QIRPLLSRKKLLVSVAAGVK--LKDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGK 163 (274)
Q Consensus 90 ~i~~~l~~~~~vis~~~g~~--~~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~ 163 (274)
++.+.++++++||+++++.. .+.+.+.++ +..+++. |. .+.....|...++.+ .+++..+.++++| .+|.
T Consensus 75 ~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~ll-~~g~ 150 (289)
T 2cvz_A 75 ALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGAEAGTLTVMLG--GPEEAVERVRPFL-AYAK 150 (289)
T ss_dssp HHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEE--SCHHHHHHHGGGC-TTEE
T ss_pred HHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHHhhCCeEEEEC--CCHHHHHHHHHHH-hhcC
Confidence 88888889999998765432 245555554 2345544 53 244444555333333 2688899999999 9996
Q ss_pred e-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCh-HHHHHhcCC
Q 024016 164 I-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHP-GQLKDDVAS 238 (274)
Q Consensus 164 ~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (274)
. +++++....... ..+.|.+.+.+...+.|+ +++.|++++++.+++..+..++ .++.. ..+ ..+.+++ +
T Consensus 151 ~~~~~~~~~~~~~~--k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s-~~~~~--~~~~~~l~~~~-~ 224 (289)
T 2cvz_A 151 KVVHVGPVGAGHAV--KAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRS-NATEN--LIPQRVLTRAF-P 224 (289)
T ss_dssp EEEEEESTTHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCB-HHHHH--THHHHTTTSCC-C
T ss_pred CeEEcCCCcHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCC-HHHHH--hccchhhcCCC-C
Confidence 4 666654333333 334566766777777777 6799999999988887766544 33322 234 3455555 7
Q ss_pred CCchHHH-------HHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024016 239 PGGTTIA-------GIHELEKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 239 ~~g~t~~-------~l~~l~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
||+.++. .++..++.|++..+.+++.+.++|+.++
T Consensus 225 ~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~ 266 (289)
T 2cvz_A 225 KTFALGLLVKDLGIAMGVLDGEKAPSPLLRLAREVYEMAKRE 266 (289)
T ss_dssp CSSBHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHc
Confidence 8887764 4566778899999999999999999875
No 29
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.92 E-value=4.1e-24 Score=185.54 Aligned_cols=248 Identities=15% Similarity=0.199 Sum_probs=177.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~~~v 87 (274)
++|||+|||+|.||.+|+++|.++|+ +|++| ||++++.+.+.+.|+...+++.++++++|+||+|||+ ..++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~----~V~~~-dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v 104 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY----ALQVW-NRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDV 104 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC----eEEEE-cCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHH
Confidence 45799999999999999999999999 99999 9999999999888998888999999999999999994 678888
Q ss_pred HH--HhccccCCCCEEEEecCCCCHH---HHHHhhC--CCceEEEcCC--cHHhhcCCc-eEEecCCCCCHHHHHHHHHH
Q 024016 88 AM--QIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMPN--TPSAVGEAA-TVMSLGGTATEEDGELIGKL 157 (274)
Q Consensus 88 ~~--~i~~~l~~~~~vis~~~g~~~~---~l~~~~~--~~~~~~~~p~--~~~~~~~g~-~~i~~~~~~~~~~~~~v~~l 157 (274)
+. ++.+.++++++||++++ ..+. .+.+.+. +..++.. |. .+.....|. ++++.+ +++.++.++++
T Consensus 105 ~~~~~~~~~l~~~~~vi~~st-~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~~a~~g~l~i~~gg---~~~~~~~~~~l 179 (320)
T 4dll_A 105 LFAQGVAAAMKPGSLFLDMAS-ITPREARDHAARLGALGIAHLDT-PVSGGTVGAEQGTLVIMAGG---KPADFERSLPL 179 (320)
T ss_dssp HTTTCHHHHCCTTCEEEECSC-CCHHHHHHHHHHHHHTTCEEEEC-CEECHHHHHHHTCEEEEEES---CHHHHHHHHHH
T ss_pred HcchhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHcCCEEEeC-CCcCCHhHHhcCCeeEEeCC---CHHHHHHHHHH
Confidence 87 78888889999998755 4443 3333332 2334432 32 233333454 344444 68899999999
Q ss_pred hhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 024016 158 FGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLK 233 (274)
Q Consensus 158 l~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (274)
|+.+ .. +++++......+.++ .+.+.+..+..+.|+ +++.|++++++.+++..+...+. ++.. ....+.
T Consensus 180 l~~~-~~~~~~g~~g~a~~~Kl~--~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~-~~~~---~~~~~l 252 (320)
T 4dll_A 180 LKVF-GRATHVGPHGSGQLTKLA--NQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFADSR-VLQL---HGQRMV 252 (320)
T ss_dssp HHHH-EEEEEEESTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTTCBH-HHHT---HHHHHH
T ss_pred HHhc-CCEEEeCCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccccCH-HHHH---hhhhhc
Confidence 9999 64 677664444444443 244555555555554 56899999999998876643322 2221 122444
Q ss_pred HhcCCCCchHHHHHHH-------HHhCCHHHHHHHHHHHHHHHHhhc
Q 024016 234 DDVASPGGTTIAGIHE-------LEKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 234 ~~~~~~~g~t~~~l~~-------l~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
+..+.|++......+. .++.|++..+.+++.+.|+++.+.
T Consensus 253 ~~~~~~gf~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 299 (320)
T 4dll_A 253 ERDFAPRARLSIQLKDMRNALATAQEIGFDAPITGLFEQLYAEGVEH 299 (320)
T ss_dssp TTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT
T ss_pred cCCCCCcccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhc
Confidence 5556788876555444 366788888999999999988764
No 30
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.92 E-value=1.6e-24 Score=186.42 Aligned_cols=251 Identities=16% Similarity=0.195 Sum_probs=181.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~~v 87 (274)
++|||+|||+|+||..++.+|.+.|+ +|++| +|++++.+.+.+.|+...+++.++++++|+||+|+| +.+++++
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v 77 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGV----TVYAF-DLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETV 77 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHH
Confidence 45799999999999999999999999 99999 999999988887888887888888889999999996 5668888
Q ss_pred HH---HhccccCCCCEEEEecCCC--CHHHHHHhhC--CCceEEEcCCc--HHhhcCCc-eEEecCCCCCHHHHHHHHHH
Q 024016 88 AM---QIRPLLSRKKLLVSVAAGV--KLKDLQEWTG--HSRFIRVMPNT--PSAVGEAA-TVMSLGGTATEEDGELIGKL 157 (274)
Q Consensus 88 ~~---~i~~~l~~~~~vis~~~g~--~~~~l~~~~~--~~~~~~~~p~~--~~~~~~g~-~~i~~~~~~~~~~~~~v~~l 157 (274)
+. ++.+.++++++||+++++. ..+.+.+.++ +..++. .|.. +.....|. +.++.+ +++.++.++++
T Consensus 78 ~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~-~p~~~~~~~a~~g~~~~~~~g---~~~~~~~v~~l 153 (301)
T 3cky_A 78 MNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD-APVSGGTKGAEAGTLTIMVGA---SEAVFEKIQPV 153 (301)
T ss_dssp HHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE-CCEESHHHHHHHTCEEEEEES---CHHHHHHHHHH
T ss_pred HcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE-ccCCCCHHHHHcCCeEEEECC---CHHHHHHHHHH
Confidence 85 7777888999999998877 3456666554 233443 2322 11223354 444443 68889999999
Q ss_pred hhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCh-HHH
Q 024016 158 FGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHP-GQL 232 (274)
Q Consensus 158 l~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 232 (274)
|+.+|.. +++++........+.. +.+...+...+.|+ +++.|++++++.+++..+..++..+... .+ ..+
T Consensus 154 l~~~g~~~~~~~~~g~~~~~Kl~~--N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l 228 (301)
T 3cky_A 154 LSVIGKDIYHVGDTGAGDAVKIVN--NLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAK---MEKFIM 228 (301)
T ss_dssp HHHHEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHH---CCCCCC
T ss_pred HHHhcCCEEEeCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHh---hhhhhh
Confidence 9999965 5566544444444332 33444444455555 6789999999999888776555444321 22 334
Q ss_pred HHhcCCCCchHHHH-------HHHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 233 KDDVASPGGTTIAG-------IHELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 233 ~~~~~~~~g~t~~~-------l~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
.+++ +|++.++.. ++..++.|++..+.+++.+.++++.+.+
T Consensus 229 ~~~~-~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g 276 (301)
T 3cky_A 229 SGDF-AGGFAMDLQHKDLGLALEAGKEGNVPLPMTAMATQIFEGGRAMG 276 (301)
T ss_dssp TCCC-SSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCC-CCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcC
Confidence 4444 677766643 4666778999999999999999998764
No 31
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.92 E-value=3.3e-24 Score=181.39 Aligned_cols=206 Identities=15% Similarity=0.213 Sum_probs=160.3
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCc-EEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCc
Q 024016 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDR-ICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKP 81 (274)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~-v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~ 81 (274)
|+.....|||+|||+|+||..++..|.+.|+ + |.+| +|++++.+.+.+ .|+....++.++++++|+||+|+|+
T Consensus 4 m~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~----~~v~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~ 78 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLATNLAKALYRKGF----RIVQVY-SRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKD 78 (266)
T ss_dssp ---CGGGCCEEEECCSHHHHHHHHHHHHHTC----CEEEEE-CSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCH
T ss_pred hhcCCCCCeEEEEcCCHHHHHHHHHHHHCCC----eEEEEE-eCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCH
Confidence 4555556899999999999999999999998 7 8999 999999988877 4888878888888999999999999
Q ss_pred ccHHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhCCCceEEEcCCcH-----HhhcCCceEEecCCCCCHHHHHHHHH
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTP-----SAVGEAATVMSLGGTATEEDGELIGK 156 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~~~~~~~~~p~~~-----~~~~~g~~~i~~~~~~~~~~~~~v~~ 156 (274)
+.+.+++.++.+.+++++++|+++++.+.+.+++.++... ..+|..| .....+...+..+ .+++..+.+++
T Consensus 79 ~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~v~~--~~~~~~~~~~~ 154 (266)
T 3d1l_A 79 SAFAELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPHYG--VFYPMQTFSKQREVDFKEIPFFIEA--SSTEDAAFLKA 154 (266)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSSEE--EEEECCCC---CCCCCTTCCEEEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHhcc--CcCCceecCCCchhhcCCCeEEEec--CCHHHHHHHHH
Confidence 9999999999888889999999999998877766655211 1233322 1111223333322 36888999999
Q ss_pred HhhhcCC-eEEcCccc---hhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 024016 157 LFGSVGK-IWRADEKL---FDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASM 221 (274)
Q Consensus 157 ll~~~g~-~~~~~e~~---~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~ 221 (274)
+|+.+|. ++++++.. +|..++++++.++++..+.+++. .+.|++++.+.+++.+++.++.++
T Consensus 155 l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~---~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 155 IASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL---KKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp HHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred HHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHcCCCHHHHHHHHHHHHHHHHhc
Confidence 9999995 57788664 78888888877777777777653 589999999999999999887654
No 32
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.92 E-value=8.4e-24 Score=182.91 Aligned_cols=247 Identities=17% Similarity=0.164 Sum_probs=173.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC--HHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN--LKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~--~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
++|||+|||+|+||.+|+++|.++|+ .+|++| ||+ +++.+.+.+.|+...+++.++++++|+||+|||++...+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~---~~V~~~-dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~ 98 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGA---IDMAAY-DAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALE 98 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSC---CEEEEE-CSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC---CeEEEE-cCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHH
Confidence 35799999999999999999999996 379999 997 578888888899888899999999999999999999888
Q ss_pred HHHHhccccCCCCEEEEecCCCCHH---HHHHhhC----CCceEEE--cCCcHHhhcCCceEEecCCCCCHHHHHHHHHH
Q 024016 87 VAMQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG----HSRFIRV--MPNTPSAVGEAATVMSLGGTATEEDGELIGKL 157 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~g~~~~---~l~~~~~----~~~~~~~--~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~l 157 (274)
++.++.+.++++++||++++ +.+. .+.+.+. +..++.. +...+.. ....++++.++ ++ +.++++
T Consensus 99 ~~~~l~~~l~~~~ivvd~st-~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~-~g~l~i~vgg~---~~--~~~~~l 171 (312)
T 3qsg_A 99 VAQQAGPHLCEGALYADFTS-CSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPH-GHRVPLVVDGD---GA--RRFQAA 171 (312)
T ss_dssp HHHHHGGGCCTTCEEEECCC-CCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTT-GGGSEEEEEST---TH--HHHHHH
T ss_pred HHHhhHhhcCCCCEEEEcCC-CCHHHHHHHHHHHHhhcCCCeEEeccccCCchhh-cCCEEEEecCC---hH--HHHHHH
Confidence 99999999999999998754 4433 2333222 2333332 2222222 22345566553 23 889999
Q ss_pred hhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 024016 158 FGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALAD---GGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLK 233 (274)
Q Consensus 158 l~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e---~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (274)
|+.+|.. +++++. ......+..+.+.++...+..+.| .+++.|+++ +..+.+..+. ++. .+.. ....+.
T Consensus 172 l~~~g~~~~~~g~~-~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~-~~~~~l~~~~-~~~-~~~~---~~~~~~ 244 (312)
T 3qsg_A 172 FTLYGCRIEVLDGE-VGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLAD-RVLASLDASF-PEH-HLRD---LALYLV 244 (312)
T ss_dssp HHTTTCEEEECCSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHS-GGG-THHH---HHHHHH
T ss_pred HHHhCCCeEEcCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHhcC-Cch-hHHH---hhhHhh
Confidence 9999975 667652 455555555667777665666666 467899998 4566666554 221 1111 123344
Q ss_pred HhcCCCCch----HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024016 234 DDVASPGGT----TIAGIHELEKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 234 ~~~~~~~g~----t~~~l~~l~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
+..+.|++. ....++..++.|+...+.+++.+.|+++.+.
T Consensus 245 ~~~~~~g~~~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~~~~~ 288 (312)
T 3qsg_A 245 ERNLEHADRRAHELGEVAATLCSVGVEPLVAEAGYRRLTRVAQV 288 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcccchHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhc
Confidence 444567665 3445566677899999999999999998775
No 33
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.92 E-value=4e-24 Score=183.63 Aligned_cols=244 Identities=14% Similarity=0.099 Sum_probs=171.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHHHHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDVA 88 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~~v~ 88 (274)
++||+|||+|.||.+|+++|.++|| +|++| ||++++.+.+.+.|+..++++.++++ +|+||+||| +.++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~ 88 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG----GVTVY-DIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV 88 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT----CEEEE-CSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH
Confidence 5799999999999999999999999 99999 99999999999999998889999998 999999999 56789999
Q ss_pred HHhccccCCCCEEEEecCCCCHH---HHHHhhC--CCceEEEcC--CcHHhhcCCce-EEecCCCCCHHHHHHHHHHhhh
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRVMP--NTPSAVGEAAT-VMSLGGTATEEDGELIGKLFGS 160 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~~---~l~~~~~--~~~~~~~~p--~~~~~~~~g~~-~i~~~~~~~~~~~~~v~~ll~~ 160 (274)
.++.+.++++++||++++ +.+. .+.+.+. +..++. .| ..|.....|.. .++.+ +++.+++++++|+.
T Consensus 89 ~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~ 163 (296)
T 3qha_A 89 GELAGHAKPGTVIAIHST-ISDTTAVELARDLKARDIHIVD-APVSGGAAAAARGELATMVGA---DREVYERIKPAFKH 163 (296)
T ss_dssp HHHHTTCCTTCEEEECSC-CCHHHHHHHHHHHGGGTCEEEE-CCEESCHHHHHHTCEEEEEEC---CHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEeCC-CCHHHHHHHHHHHHHcCCEEEe-CCCcCCHHHHhcCCccEEecC---CHHHHHHHHHHHHH
Confidence 999998999999998754 4443 3444443 233332 23 22333445553 44443 68899999999999
Q ss_pred cCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHH------HHHHHHHHHHHHHHHHhcCCChH
Q 024016 161 VGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELA------LGLASQTVLGAASMVTKSGKHPG 230 (274)
Q Consensus 161 ~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 230 (274)
+|.. +++++........+. .+.+.+..+..+.|+ +++.|+++++. .+++..+..++ . ..+ .+.
T Consensus 164 ~g~~~~~~g~~g~a~~~Kl~--~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s-~-~~~---~~~ 236 (296)
T 3qha_A 164 WAAVVIHAGEPGAGTRMKLA--RNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAI-M-VRD---NMK 236 (296)
T ss_dssp HEEEEEEEESTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGG-C-CCS---SCS
T ss_pred HcCCeEEcCChhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccC-H-Hhh---chh
Confidence 9964 677654434444433 345555555555555 56899999998 66665443333 1 111 222
Q ss_pred HHHHhcCCCCchH-----HHHH-------HHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024016 231 QLKDDVASPGGTT-----IAGI-------HELEKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 231 ~~~~~~~~~~g~t-----~~~l-------~~l~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
.+ +. +.|++.. .... +..++.+++..+.+++.+.|+++.+.
T Consensus 237 ~~-~~-~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~ 289 (296)
T 3qha_A 237 DL-EP-DNFLYQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGLAAGLGV 289 (296)
T ss_dssp CC-CT-TSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTC
T ss_pred hh-hc-CCCCCchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhc
Confidence 22 23 5677665 3332 33455678788888888888887764
No 34
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.91 E-value=1.6e-23 Score=176.99 Aligned_cols=239 Identities=14% Similarity=0.189 Sum_probs=169.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r--~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
|||+|||+|+||.+|+.+|.++|+ +|++| +| ++++.+.+.+.|+. +++.++++++|+||+|||++...+.+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~----~V~~~-~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~ 73 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGV----EVVTS-LEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA 73 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC----EEEEC-CTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCC----eEEEe-CCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH
Confidence 589999999999999999999999 99999 99 77888888777877 67788889999999999998755556
Q ss_pred HHhccccCCCCEEEEecCCCCH---HHHHHhhCCCceEEE-cCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCe
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKL---KDLQEWTGHSRFIRV-MPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKI 164 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~---~~l~~~~~~~~~~~~-~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~ 164 (274)
.++.+.+++ ++|++ +++.+ +.+.+.++...++.. +-..|...+.|...++.++ .+ +.+++ |+.+|..
T Consensus 74 ~~~~~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g~~~~~v~~~~~~~~~g~~~~~~g~---~~--~~~~~-l~~~g~~ 144 (264)
T 1i36_A 74 RRAGRHVRG--IYVDI-NNISPETVRMASSLIEKGGFVDAAIMGSVRRKGADIRIIASGR---DA--EEFMK-LNRYGLN 144 (264)
T ss_dssp HHHHTTCCS--EEEEC-SCCCHHHHHHHHHHCSSSEEEEEEECSCHHHHGGGCEEEEEST---TH--HHHHG-GGGGTCE
T ss_pred HHHHHhcCc--EEEEc-cCCCHHHHHHHHHHHhhCCeeeeeeeCCccccccCCeEEecCC---cH--HHhhh-HHHcCCe
Confidence 777777655 77877 55554 356666653212221 1234555556666555443 22 78888 9999975
Q ss_pred -EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCC
Q 024016 165 -WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPG 240 (274)
Q Consensus 165 -~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (274)
++++++ ......+..+.+.+++.+...+.|+ +++.|++++ +++.+.+++ +...... .+ .+.++.++|+
T Consensus 145 ~~~~~~~-~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~-g~~~~~~----~~-~~~~~~~~~g 216 (264)
T 1i36_A 145 IEVRGRE-PGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTE-GNDFRES----AI-SRLKSSCIHA 216 (264)
T ss_dssp EEECSSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTS-CSSTHHH----HH-HHHHHHHHTH
T ss_pred eEECCCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhc-CccHHHH----HH-HHhcCCCCcc
Confidence 677764 4444444445577766677777777 789999986 777776654 2112111 22 3555556788
Q ss_pred chHHHHH----HHHHhCCHHHHHHHHHHHHHHHHhhcC
Q 024016 241 GTTIAGI----HELEKSGFRGILMNAVVAAAKRSRELS 274 (274)
Q Consensus 241 g~t~~~l----~~l~~~~~~~~~~~a~~~~~~r~~~~~ 274 (274)
+++...+ +..++. ++..+.+++.+.++++++++
T Consensus 217 ~~~~~~~~~~~~~a~~~-v~~p~~~~v~~~~~~~~~~~ 253 (264)
T 1i36_A 217 RRRYEEMKEVQDMLAEV-IDPVMPTCIIRIFDKLKDVK 253 (264)
T ss_dssp HHHHHHHHHHHHHHHTT-SCCSHHHHHHHHHHHHCC--
T ss_pred hhhHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHcC
Confidence 8777766 677888 99999999999999988763
No 35
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.90 E-value=2.8e-22 Score=173.25 Aligned_cols=252 Identities=11% Similarity=0.078 Sum_probs=168.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceecc------------Cchhhcc---CCC
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLS------------DNNAVVE---YSD 73 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~------------~~~~~~~---~aD 73 (274)
++|||+|||+|+||++++..|.++|+ +|++| +|++++.+.+.+.|+.... +..++.+ ++|
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 76 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGN----DVTLI-DQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVD 76 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCS
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCC----cEEEE-ECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCC
Confidence 35799999999999999999999999 99999 9999999888876654321 3334444 899
Q ss_pred EEEEeeCcccHHHHHHHhccccCCCCEEEEecCCCCH-HHHHHhhCCCceE---------EEcCCcHHhhcCCceEEecC
Q 024016 74 VVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL-KDLQEWTGHSRFI---------RVMPNTPSAVGEAATVMSLG 143 (274)
Q Consensus 74 iIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~-~~l~~~~~~~~~~---------~~~p~~~~~~~~g~~~i~~~ 143 (274)
+||+|+|++.+++++.++.+.++++++||++++|++. +.+++.++..+++ +..|+.+...+.|.+.+...
T Consensus 77 ~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~ 156 (316)
T 2ew2_A 77 LIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENI 156 (316)
T ss_dssp EEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEES
T ss_pred EEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeec
Confidence 9999999999999999999999999999999999876 6677777643444 23455555556676666543
Q ss_pred CCCCHHHHHHHHHHhhhcCCeEEcCccc-------------hhhHHHhhcchHHHHH-------HHHHHHHHH---HHHc
Q 024016 144 GTATEEDGELIGKLFGSVGKIWRADEKL-------------FDAITGLSGSGPAYIF-------LAIEALADG---GVAA 200 (274)
Q Consensus 144 ~~~~~~~~~~v~~ll~~~g~~~~~~e~~-------------~~~~~a~~~~~~~~~~-------~~~~~l~e~---~~~~ 200 (274)
.+.+++..+.++++|+.+|..++..++. ++.++++.++.+.++. .+...+.|. +++.
T Consensus 157 ~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~~~ 236 (316)
T 2ew2_A 157 DPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKE 236 (316)
T ss_dssp SGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHHHc
Confidence 4446788999999999999764444442 5777888888777642 233344443 4578
Q ss_pred CCCH--HHHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCCc------hHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 024016 201 GLPR--ELALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGG------TTIAGIHELEKSGFRGILMNAVVAAAKRS 270 (274)
Q Consensus 201 Gl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~t~~~l~~l~~~~~~~~~~~a~~~~~~r~ 270 (274)
|++. +...+++....... .. ....+.++.+. ..++. .....++..++.|+...+.+.+.+.++..
T Consensus 237 G~~~~~~~~~~~~~~~~~~~---~~-~~~~~sm~~d~-~~~g~~~E~~~~~~~~~~~a~~~gv~~P~~~~~~~~~~~~ 309 (316)
T 2ew2_A 237 AIYLDQAEVYTHIVQTYDPN---GI-GLHYPSMYQDL-IKNHRLTEIDYINGAVWRKGQKYNVATPFCAMLTQLVHGK 309 (316)
T ss_dssp TCCCCHHHHHHHHHHTTCTT---TT-TTSCCHHHHHH-TTTCCCCSGGGTHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHhccc---cC-CCCCcHHHHHH-HHcCCcchHHHHhhHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 9876 34444443211100 00 01112233222 01122 22234555566677777777776666544
No 36
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.90 E-value=9e-22 Score=170.04 Aligned_cols=196 Identities=12% Similarity=0.020 Sum_probs=147.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----------cC--------------ceec
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----------IG--------------VKVL 62 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-----------~g--------------~~~~ 62 (274)
|+.+||+|||+|.||.+||..|.++|| +|++| ||++++++.+.+ .| ++.+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~----~V~l~-d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~ 78 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGF----RVKLY-DIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC 78 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe
Confidence 356799999999999999999999999 99999 999998776642 23 4566
Q ss_pred cCchhhccCCCEEEEeeCcc--cHHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceE
Q 024016 63 SDNNAVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATV 139 (274)
Q Consensus 63 ~~~~~~~~~aDiIil~v~~~--~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~ 139 (274)
+++.+++++||+||+|+|.+ ..++++.++.+.++++++|+|.+++++++.+++.++ ..++++.||..|..... ...
T Consensus 79 ~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~-lve 157 (319)
T 2dpo_A 79 TNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIP-LVE 157 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCC-EEE
T ss_pred CCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcc-eEE
Confidence 78888899999999999864 456788899999999999999999999999988775 35789999988876433 455
Q ss_pred EecCCCCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 024016 140 MSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAY-IFLAIEALADGGVAAGLPRELALGLASQTVL 216 (274)
Q Consensus 140 i~~~~~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~-~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~ 216 (274)
+++++..+++.++.++++++.+|+. ++++.+....+ .+.+ ...+.|++. .+.+.|+++++..+++..++.
T Consensus 158 iv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi------~Nrll~a~~~EA~~-l~~~g~~~~~~id~a~~~g~g 229 (319)
T 2dpo_A 158 LVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFV------LNRLQYAIISEAWR-LVEEGIVSPSDLDLVMSDGLG 229 (319)
T ss_dssp EEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTTT------HHHHHHHHHHHHHH-HHHTTSSCHHHHHHHHHTTHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCch------HHHHHHHHHHHHHH-HHHhCCCCHHHHHHHHHhCCC
Confidence 6777778999999999999999976 77754321111 1122 222233332 234566799998888875543
No 37
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.89 E-value=6.3e-23 Score=176.09 Aligned_cols=249 Identities=16% Similarity=0.155 Sum_probs=167.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHHHHHH
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKDVAM 89 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~~v~~ 89 (274)
|||+|||+|+||.+++.+|.+.|+ +|++| +|++++.+.+.+.|+....++.++++++|+||+|+| ++.+++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~ 75 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGY----PLIIY-DVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYS 75 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTC----CEEEE-CSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHh
Confidence 589999999999999999999999 99999 999999998888888888888888889999999995 667889887
Q ss_pred Hh---ccccCCCCEEEEecCCCCHHHHHH---hhCCCceEEEcCCcHHh-----hcCCceEEecCCCCCHHHHHHHHHHh
Q 024016 90 QI---RPLLSRKKLLVSVAAGVKLKDLQE---WTGHSRFIRVMPNTPSA-----VGEAATVMSLGGTATEEDGELIGKLF 158 (274)
Q Consensus 90 ~i---~~~l~~~~~vis~~~g~~~~~l~~---~~~~~~~~~~~p~~~~~-----~~~g~~~i~~~~~~~~~~~~~v~~ll 158 (274)
++ .+.+++++++|+ +++++++..++ .++.. . +.+|+.|.. ...+...++.+ .+++..+.++++|
T Consensus 76 ~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~-g-~~~~~~p~~~g~~~a~~~~~~~~~~--~~~~~~~~v~~l~ 150 (296)
T 2gf2_A 76 GANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM-G-AVFMDAPVSGGVGAARSGNLTFMVG--GVEDEFAAAQELL 150 (296)
T ss_dssp STTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT-T-CEEEECCEESHHHHHHHTCEEEEEE--SCGGGHHHHHHHH
T ss_pred CchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc-C-CEEEEcCCCCChhHHhcCcEEEEeC--CCHHHHHHHHHHH
Confidence 64 446788999999 78888765443 23211 1 112222222 22455444444 3688899999999
Q ss_pred hhcCCe-EEcCccchhhHHHhhcchHHHHH----HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 024016 159 GSVGKI-WRADEKLFDAITGLSGSGPAYIF----LAIEALADGGVAAGLPRELALGLASQTVLGAASMVTKSGKHPGQLK 233 (274)
Q Consensus 159 ~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~----~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (274)
+.+|.. ++++.........+.. +.+.+ .+.|++. .+++.|++++++.+++..+. +...++...+..|..+.
T Consensus 151 ~~~g~~~~~~~~~g~~~~~kl~~--n~~~~~~~~~~~Ea~~-~~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 226 (296)
T 2gf2_A 151 GCMGSNVVYCGAVGTGQAAKICN--NMLLAISMIGTAEAMN-LGIRLGLDPKLLAKILNMSS-GRCWSSDTYNPVPGVMD 226 (296)
T ss_dssp TTTEEEEEEEESTTHHHHHHHHH--HHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHHTST-TCBHHHHHSCSSTTTCS
T ss_pred HHHcCCeEEeCCccHHHHHHHHH--HHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHhCc-ccCHHHHhcCCcccccc
Confidence 999965 5555432222222211 11222 2333433 46789999999888877532 22233333333333332
Q ss_pred ----HhcCCCCchHHH-------HHHHHHhCCHHHHHHHHHHHHHHHHhhc
Q 024016 234 ----DDVASPGGTTIA-------GIHELEKSGFRGILMNAVVAAAKRSREL 273 (274)
Q Consensus 234 ----~~~~~~~g~t~~-------~l~~l~~~~~~~~~~~a~~~~~~r~~~~ 273 (274)
.+.+.+++..+. .++..++.|+...+.+++.+.++++.+.
T Consensus 227 ~s~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~ 277 (296)
T 2gf2_A 227 GVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAK 277 (296)
T ss_dssp SSGGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT
T ss_pred cchhccCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHc
Confidence 223455554432 3555677889999999999999988764
No 38
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.89 E-value=6.3e-21 Score=167.32 Aligned_cols=252 Identities=15% Similarity=0.113 Sum_probs=167.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC--------------ceeccCchhhccCCCE
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG--------------VKVLSDNNAVVEYSDV 74 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g--------------~~~~~~~~~~~~~aDi 74 (274)
++|||+|||+|+||++++..|.++|+ +|++| +|++++.+.+.+.+ +...+++.++++++|+
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~----~V~l~-~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQ----KVRLW-SYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTC----CEEEE-CSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCE
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCE
Confidence 35799999999999999999999999 99999 99999988887643 3455677788899999
Q ss_pred EEEeeCcccHHHHHHHhccccCCCCEEEEecCCCCHH------HHHHhhCCCc-eEEEcCCcHHhhcCCc-eEEecCCCC
Q 024016 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLK------DLQEWTGHSR-FIRVMPNTPSAVGEAA-TVMSLGGTA 146 (274)
Q Consensus 75 Iil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~~------~l~~~~~~~~-~~~~~p~~~~~~~~g~-~~i~~~~~~ 146 (274)
||+|||++.++++++++.++++++++||++++|+..+ .+++.++..+ .+...|+.+.++..+. +.++.+ ..
T Consensus 103 VilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via-~~ 181 (356)
T 3k96_A 103 ILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLA-SN 181 (356)
T ss_dssp EEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEE-ES
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEe-cC
Confidence 9999999999999999999999999999999998764 5666676333 3456788887776654 323222 23
Q ss_pred CHHHHHHHHHHhhhcCCeEEcCccchh--------hHHHh--------hcchHHHHHHHHHHHHHH---HHHcCCCHHHH
Q 024016 147 TEEDGELIGKLFGSVGKIWRADEKLFD--------AITGL--------SGSGPAYIFLAIEALADG---GVAAGLPRELA 207 (274)
Q Consensus 147 ~~~~~~~v~~ll~~~g~~~~~~e~~~~--------~~~a~--------~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~ 207 (274)
+++..+.++++|+..+..++.+++... .+.++ .-..+...+.+..++.|. +.+.|.+++.+
T Consensus 182 ~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t~ 261 (356)
T 3k96_A 182 NSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETL 261 (356)
T ss_dssp CHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred CHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHhh
Confidence 688899999999988866555444221 11111 111233445555566655 56899999887
Q ss_pred HHH------HHHHHHH------HHHHHHhcCCChHHHHHhc-CCCCc-hH-HHHHHHHHhCCHHHHHHHHHHHHH
Q 024016 208 LGL------ASQTVLG------AASMVTKSGKHPGQLKDDV-ASPGG-TT-IAGIHELEKSGFRGILMNAVVAAA 267 (274)
Q Consensus 208 ~~~------~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~g-~t-~~~l~~l~~~~~~~~~~~a~~~~~ 267 (274)
..+ +...... ....+ -.|.+.++..+.. ...-| .| ...++..++.++.-.+.+++.+.+
T Consensus 262 ~gl~g~gDl~~tc~s~~sRN~~~G~~l-~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~~v~~il 335 (356)
T 3k96_A 262 TGLAGLGDLVLTCTDNQSRNRRFGLAL-GEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRIL 335 (356)
T ss_dssp TSTTTHHHHHHHHHCTTCHHHHHHHHH-HHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred cccchhhHHHHhccCCCCccHHHHHHH-HCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 632 2211110 01111 1255555544332 12222 33 333444466676666666665544
No 39
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.89 E-value=1e-21 Score=178.77 Aligned_cols=196 Identities=11% Similarity=0.113 Sum_probs=148.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc----CceeccCchhhccC---CCEEEEee
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI----GVKVLSDNNAVVEY---SDVVVFSV 79 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~----g~~~~~~~~~~~~~---aDiIil~v 79 (274)
.|++++|||||+|+||++|+.+|.++|+ +|++| ||++++.+.+.+. |+..+.++.++++. +|+||+||
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~----~V~v~-~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~V 86 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGY----TVSIF-NRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMV 86 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTC----CEEEE-CSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECS
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCC----eEEEE-eCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEEC
Confidence 4678899999999999999999999999 99999 9999999988874 78888888888876 99999999
Q ss_pred Cc-ccHHHHHHHhccccCCCCEEEEecCCCCH--HHHHHhhC--CCceEEEcCC--cHHhhcCCceEEecCCCCCHHHHH
Q 024016 80 KP-QVVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGE 152 (274)
Q Consensus 80 ~~-~~~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~i~~~~~~~~~~~~ 152 (274)
|+ +.++++++++.+.++++++||+++++... ..+.+.++ +..++. .|. .|.....|.+++..+ +++.++
T Consensus 87 p~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~-~pv~gg~~~a~~g~~i~~gg---~~~~~~ 162 (480)
T 2zyd_A 87 KAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIG-TGVSGGEEGALKGPSIMPGG---QKEAYE 162 (480)
T ss_dssp CSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-EEEESHHHHHHHCCEEEEES---CHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeC-CccccCHhHHhcCCeEEecC---CHHHHH
Confidence 98 58999999999999999999999888754 34555553 234443 242 455456677555544 688999
Q ss_pred HHHHHhhhcCCe--------EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHHH
Q 024016 153 LIGKLFGSVGKI--------WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVA-AGLPRELALGLASQ 213 (274)
Q Consensus 153 ~v~~ll~~~g~~--------~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~-~Gl~~~~~~~~~~~ 213 (274)
.++++|+.+|.. .++++........+. .+.+.+..+..+.|+ +++ .|++++++.+++..
T Consensus 163 ~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~--~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~ 233 (480)
T 2zyd_A 163 LVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMV--HNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTE 233 (480)
T ss_dssp HHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccccCCCceEEEECCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 999999999854 456665444444443 244555667777777 567 69999999888753
No 40
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.89 E-value=3.7e-21 Score=164.14 Aligned_cols=196 Identities=15% Similarity=0.106 Sum_probs=147.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-----------C--------------ceec
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-----------G--------------VKVL 62 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~-----------g--------------~~~~ 62 (274)
|+.+||+|||+|.||++||..|.++|+ +|++| ||++++++.+.+. | +...
T Consensus 2 m~~~kV~VIGaG~mG~~iA~~la~~G~----~V~l~-d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 76 (283)
T 4e12_A 2 TGITNVTVLGTGVLGSQIAFQTAFHGF----AVTAY-DINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS 76 (283)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC----eEEEE-eCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe
Confidence 456799999999999999999999999 99999 9999887766542 2 3556
Q ss_pred cCchhhccCCCEEEEeeCcc--cHHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceE
Q 024016 63 SDNNAVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATV 139 (274)
Q Consensus 63 ~~~~~~~~~aDiIil~v~~~--~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~ 139 (274)
+++.+++++||+||+|+|++ ...+++.++.+.++++++++|.+++++++.+.+.++ ..++++.||..|....... .
T Consensus 77 ~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lv-e 155 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTA-E 155 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEE-E
T ss_pred CCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceE-E
Confidence 77778889999999999987 678888999888999999999999999988887775 3578899988776654433 4
Q ss_pred EecCCCCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 024016 140 MSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTV 215 (274)
Q Consensus 140 i~~~~~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~ 215 (274)
++++...+++.++.++++++.+|+. ++++.+....+.. ..+...+.+++. .+.+.+.++++..+++..++
T Consensus 156 vv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~n-----r~~~~~~~ea~~-l~~~g~~~~~~id~~~~~~~ 226 (283)
T 4e12_A 156 VMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGYVLN-----SLLVPLLDAAAE-LLVDGIADPETIDKTWRIGT 226 (283)
T ss_dssp EEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHH-----HHHHHHHHHHHH-HHHTTSCCHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCEEeh-----HHHHHHHHHHHH-HHHhCCCCHHHHHHHHHhcc
Confidence 5667777899999999999999976 7774433222110 111122233322 23455679998877776543
No 41
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.88 E-value=1.6e-21 Score=171.12 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=143.7
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCC---CEEEEeeC
Q 024016 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYS---DVVVFSVK 80 (274)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~a---DiIil~v~ 80 (274)
-|.+|++|||||||+|.||.+|+.+|.++|+ +|++| ||++++.+.+.+.|+..+.++.++++++ |+||+|||
T Consensus 16 ~~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~----~V~v~-dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 16 ENLYFQSMQIGMIGLGRMGADMVRRLRKGGH----ECVVY-DLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred chhhhcCCEEEEECchHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 4566677999999999999999999999999 99999 9999999999988988888899988888 99999999
Q ss_pred cccHHHHHHHhccccCCCCEEEEecCCCCH--HHHHHhhC--CCceEEE-cCCcHHhhcCCceEEecCCCCCHHHHHHHH
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRV-MPNTPSAVGEAATVMSLGGTATEEDGELIG 155 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~~~--~~~~~~~-~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~ 155 (274)
++.+++++.++.+.++++++||+++++.+. ..+.+.+. +..++.. +...+.....|.++++.+ +++.++.++
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~~im~GG---~~~a~~~~~ 167 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGYCLMIGG---EKQAVERLD 167 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCCEEEEES---CHHHHHHTH
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCCeeeecC---CHHHHHHHH
Confidence 889999999999999999999988665432 23333332 3334432 112333444566555544 689999999
Q ss_pred HHhhhcC--------------------C-eEEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHc-----------
Q 024016 156 KLFGSVG--------------------K-IWRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAA----------- 200 (274)
Q Consensus 156 ~ll~~~g--------------------~-~~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~----------- 200 (274)
++|+.+| . .+++++.....++.++ .+.+++..+.++.|+ +++.
T Consensus 168 ~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~--~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~ 245 (358)
T 4e21_A 168 PVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMV--HNGIEYGLMAAYAEGLNILHHANAGKEGQGADA 245 (358)
T ss_dssp HHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTTCC--------
T ss_pred HHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 9999999 3 3667665444444433 234444445555554 3455
Q ss_pred -------------CCCHHHHHHHHHH
Q 024016 201 -------------GLPRELALGLASQ 213 (274)
Q Consensus 201 -------------Gl~~~~~~~~~~~ 213 (274)
|++.++..++...
T Consensus 246 ~~~~~~~~~~~~~~~d~~~i~~~~~~ 271 (358)
T 4e21_A 246 ETAPLRNPDFYRYDLDLADITEVWRR 271 (358)
T ss_dssp ------CGGGCCCCCCHHHHHHHHTT
T ss_pred cccccccchhcccCCCHHHHHHHHhC
Confidence 7898888777654
No 42
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.88 E-value=4.3e-22 Score=163.78 Aligned_cols=153 Identities=14% Similarity=0.226 Sum_probs=127.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEE-EeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICT-AVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v-~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~ 85 (274)
|++|||+|||+|+||.+++++|.++|+ +|++ | +|++++++.+.+ .|+....+..+.++++|+||+|+|++.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~----~V~~v~-~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~~~~ 95 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQI----PAIIAN-SRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYDSIA 95 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTC----CEEEEC-TTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGGGHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCC----EEEEEE-CCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChHHHH
Confidence 457899999999999999999999999 8998 8 999999988776 57766566677789999999999999999
Q ss_pred HHHHHhccccCCCCEEEEecCCC--------------CHHHHHHhhCCCceEEEcCCcHHhhcC-C-------ceEEecC
Q 024016 86 DVAMQIRPLLSRKKLLVSVAAGV--------------KLKDLQEWTGHSRFIRVMPNTPSAVGE-A-------ATVMSLG 143 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~g~--------------~~~~l~~~~~~~~~~~~~p~~~~~~~~-g-------~~~i~~~ 143 (274)
+++.++.+ + ++++||++++++ ..+.+++.+++.++++.+|+.|..... + ...++.+
T Consensus 96 ~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g 173 (220)
T 4huj_A 96 DIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKVVKAFNTLPAAVLAADPDKGTGSRVLFLSG 173 (220)
T ss_dssp HHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEEEEESCSSCHHHHTSCSBCSSCEEEEEEEE
T ss_pred HHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCEEECCCCCCHHHhhhCcccCCCCeeEEEeC
Confidence 99999887 5 688999999888 357888888877899999988776544 2 2334444
Q ss_pred CCCCHHHHHHHHHHhhhcCCe-EEcCc
Q 024016 144 GTATEEDGELIGKLFGSVGKI-WRADE 169 (274)
Q Consensus 144 ~~~~~~~~~~v~~ll~~~g~~-~~~~e 169 (274)
. +++..+.++++|+.+|.. +++++
T Consensus 174 ~--~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 174 N--HSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp S--CHHHHHHHHHHHHHTTCEEEECCS
T ss_pred C--CHHHHHHHHHHHHHhCCCeEeeCC
Confidence 3 689999999999999975 67664
No 43
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.88 E-value=3.5e-21 Score=168.09 Aligned_cols=249 Identities=16% Similarity=0.196 Sum_probs=161.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC-----------ceeccCchhhccCCCEEEEe
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG-----------VKVLSDNNAVVEYSDVVVFS 78 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g-----------~~~~~~~~~~~~~aDiIil~ 78 (274)
.|||+|||+|+||++|+.+|.++|+ +|++| +|++++.+.+.+.| +..++++.+ ++++|+||+|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~----~V~~~-~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~ 87 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGE----EVILW-ARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIA 87 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC----eEEEE-eCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEE
Confidence 4799999999999999999999999 99999 99999999888765 466677778 8899999999
Q ss_pred eCcccHHHHHHHhccccCCCCEEEEecCCCCHH---HHHHh----hCCCceEEEcCCcHHhhcCCc-eEEecCCCCCHHH
Q 024016 79 VKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLK---DLQEW----TGHSRFIRVMPNTPSAVGEAA-TVMSLGGTATEED 150 (274)
Q Consensus 79 v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~~---~l~~~----~~~~~~~~~~p~~~~~~~~g~-~~i~~~~~~~~~~ 150 (274)
||++++++++.++.+ +++++|++++|++.+ .+.+. ++....++..|+.+...+.|. +.++.+. .+
T Consensus 88 vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~~~~g~~~~~~~g~---~~- 160 (335)
T 1z82_A 88 IPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTAVTLAG---EN- 160 (335)
T ss_dssp SCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHHHHTTCCEEEEEEE---TT-
T ss_pred CCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHHHhCCCceEEEEEe---hh-
Confidence 999999999988776 788999999887753 23332 221135678899988777665 3444332 12
Q ss_pred HHHHHHHhhhcCCeEEcCccch---------hh----HHHhhc--c-hHHHHHHHHHHHHH---HHHHcCCCHHHHHHHH
Q 024016 151 GELIGKLFGSVGKIWRADEKLF---------DA----ITGLSG--S-GPAYIFLAIEALAD---GGVAAGLPRELALGLA 211 (274)
Q Consensus 151 ~~~v~~ll~~~g~~~~~~e~~~---------~~----~~a~~~--~-~~~~~~~~~~~l~e---~~~~~Gl~~~~~~~~~ 211 (274)
.+.++++|+..|...+..++.. +. ..++.+ . .+.+...+...+.| .+++.|++++.+.++.
T Consensus 161 ~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~l~ 240 (335)
T 1z82_A 161 SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLA 240 (335)
T ss_dssp HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTT
T ss_pred HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcccc
Confidence 7789999999997644444322 11 111111 1 12222333334444 3678999998765431
Q ss_pred --HH---HHH-------HHHHHHHhcCCChHHHHHhcCCCC---chHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Q 024016 212 --SQ---TVL-------GAASMVTKSGKHPGQLKDDVASPG---GTTIAGIHELEKSGFRGILMNAVVAAAKRSRE 272 (274)
Q Consensus 212 --~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---g~t~~~l~~l~~~~~~~~~~~a~~~~~~r~~~ 272 (274)
.+ +.. ...+.+. .+.+++.+.+...+.- ..+...++..++.|++..+.+++.+.+++.++
T Consensus 241 ~~~~~~~t~~s~~~~n~~~~~~~~-~g~~~~~~~~~~g~~~e~~~~~~~v~~~a~~~gv~~P~~~~v~~~~~~~~~ 315 (335)
T 1z82_A 241 GIGDLMVTCNSRYSRNRRFGELIA-RGFNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKP 315 (335)
T ss_dssp THHHHHHHHHCTTCHHHHHHHHHH-HTCCHHHHHHTCSSCCTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCCC
T ss_pred cccceeeeccCccCcHHHHHHHHh-CCCCHHHHHHhcCCeeeHHHHHHHHHHHHHHhCCCCcHHHHHHHHHhCCCC
Confidence 11 000 0112222 2445555544332211 11223344457788888888888888776544
No 44
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.87 E-value=9.7e-22 Score=170.12 Aligned_cols=242 Identities=14% Similarity=0.134 Sum_probs=158.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhC-----C-CCCCCcEEEEeCCCHHHHHHHHH-cCceecc-------------Cchhhcc
Q 024016 11 FILGFIGAGKMAESIAKGVAKS-----G-VLPPDRICTAVHSNLKRRDAFES-IGVKVLS-------------DNNAVVE 70 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~-----g-~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~-------------~~~~~~~ 70 (274)
|||+|||+|+||++|+.+|.++ | + +|++| +| +++.+.+.+ .|+.+.. +..+.+.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~----~V~~~-~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLL----EVSWI-AR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVG 82 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSE----EEEEE-CC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCC----CEEEE-Ec-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccC
Confidence 6999999999999999999999 9 8 99999 99 888888888 7876543 3445678
Q ss_pred CCCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCCCCH-HHHHHhhCCCceEEEcCCcHHh---------hcCCceE-
Q 024016 71 YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL-KDLQEWTGHSRFIRVMPNTPSA---------VGEAATV- 139 (274)
Q Consensus 71 ~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~-~~l~~~~~~~~~~~~~p~~~~~---------~~~g~~~- 139 (274)
++|+||+|||+++++++++++.+.++++++||++++|+.. +.+++.++..++++.+++.+.. .+.|...
T Consensus 83 ~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~~~ 162 (317)
T 2qyt_A 83 TVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADRELFY 162 (317)
T ss_dssp CEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCceEE
Confidence 8999999999999999999999988888999999999987 5677777654555555443221 2334333
Q ss_pred EecC-CCCCHHHHHHHHHHhhhcCCeEEcCcc-------------chhhHHHhhcchHHHHH-----HHHHHHHHH---H
Q 024016 140 MSLG-GTATEEDGELIGKLFGSVGKIWRADEK-------------LFDAITGLSGSGPAYIF-----LAIEALADG---G 197 (274)
Q Consensus 140 i~~~-~~~~~~~~~~v~~ll~~~g~~~~~~e~-------------~~~~~~a~~~~~~~~~~-----~~~~~l~e~---~ 197 (274)
+... +..+.+.. .+.++|+..|..++..++ .++.++++.++++.++. .+...+.|. +
T Consensus 163 ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E~~~v~ 241 (317)
T 2qyt_A 163 FGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEEVAELF 241 (317)
T ss_dssp EECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 22356667 899999999976554454 46778888888887763 222344443 4
Q ss_pred HHcCCCHH--HHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCCc------hHHHHHHHHHhCCHHHHHHHHHHHHH
Q 024016 198 VAAGLPRE--LALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGG------TTIAGIHELEKSGFRGILMNAVVAAA 267 (274)
Q Consensus 198 ~~~Gl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~t~~~l~~l~~~~~~~~~~~a~~~~~ 267 (274)
++.|++.+ ...+++........+ ..+.++. ++ .++. .+...++.-++.|+...+.+.+.+.+
T Consensus 242 ~a~G~~~~~~~~~~~~~~~~~~~~~------~~~sm~~-d~-~~g~~~E~~~~~g~~~~~a~~~gv~~P~~~~~~~~~ 311 (317)
T 2qyt_A 242 RAKYGQVPDDVVQQLLDKQRKMPPE------STSSMHS-DF-LQGGSTEVETLTGYVVREAEALRVDLPMYKRMYREL 311 (317)
T ss_dssp HHHTSCCCSSHHHHHHHHHHHC----------------------------CTTTHHHHHHHHHTTCCCHHHHHHHHTT
T ss_pred HHcCCCCChHHHHHHHHHHhccCCC------CCChHHH-HH-HcCCccCHHHHhhHHHHHHHHcCCCCCHHHHHHHHH
Confidence 57898753 455555433211111 1112222 11 1222 23344555566677766666655443
No 45
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.87 E-value=8.8e-21 Score=173.04 Aligned_cols=193 Identities=15% Similarity=0.163 Sum_probs=148.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cCceeccCchhhccC---CCEEEEeeCc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IGVKVLSDNNAVVEY---SDVVVFSVKP 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-----~g~~~~~~~~~~~~~---aDiIil~v~~ 81 (274)
..+|||||+|+||++|+.+|.++|| +|++| ||++++++.+.+ .|+..+.++.++++. +|+||+|||+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~----~V~v~-dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~ 84 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGF----TVCAY-NRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKA 84 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCC
Confidence 3689999999999999999999999 99999 999999999987 578877888888776 9999999998
Q ss_pred -ccHHHHHHHhccccCCCCEEEEecCCCCH--HHHHHhhC--CCceEEEcC--CcHHhhcCCceEEecCCCCCHHHHHHH
Q 024016 82 -QVVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMP--NTPSAVGEAATVMSLGGTATEEDGELI 154 (274)
Q Consensus 82 -~~~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~~~--~~~~~~~~p--~~~~~~~~g~~~i~~~~~~~~~~~~~v 154 (274)
+.++++++++.+.++++++||+++++.+. ..+.+.+. +..++. +| +.|.....|.+++..+ +++.++.+
T Consensus 85 ~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~-~pVsgg~~~a~~G~~im~gg---~~e~~~~v 160 (497)
T 2p4q_A 85 GAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVG-SGVSGGEEGARYGPSLMPGG---SEEAWPHI 160 (497)
T ss_dssp SHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-EEEESHHHHHHHCCEEEEEE---CGGGHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeC-CCcccChhHhhcCCeEEecC---CHHHHHHH
Confidence 58999999999999999999998877653 34544443 334443 24 4565566677555543 68899999
Q ss_pred HHHhhhcCCe-------EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHHH
Q 024016 155 GKLFGSVGKI-------WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVA-AGLPRELALGLASQ 213 (274)
Q Consensus 155 ~~ll~~~g~~-------~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~-~Gl~~~~~~~~~~~ 213 (274)
+++|+.+|.. .++++........+. .+.+.+..+..+.|+ +++ .|++++++.+++..
T Consensus 161 ~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~--~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~ 228 (497)
T 2p4q_A 161 KNIFQSISAKSDGEPCCEWVGPAGAGHYVKMV--HNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAK 228 (497)
T ss_dssp HHHHHHHSCEETTEESCCCCEETTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHhcCccCCCCceEEECCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHH
Confidence 9999999964 455554444444433 244556667777777 567 59999999888853
No 46
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.87 E-value=4.3e-20 Score=158.94 Aligned_cols=191 Identities=13% Similarity=0.106 Sum_probs=139.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH-----------Hc------------------Cce
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE-----------SI------------------GVK 60 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~-----------~~------------------g~~ 60 (274)
++||+|||+|.||++||..|.++|+ +|++| ||++++++.+. +. .++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~----~V~~~-d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~ 89 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGH----TVVLV-DQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIA 89 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceE
Confidence 4689999999999999999999999 99999 99998876532 12 244
Q ss_pred eccCchhhccCCCEEEEeeCccc--HHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCc
Q 024016 61 VLSDNNAVVEYSDVVVFSVKPQV--VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAA 137 (274)
Q Consensus 61 ~~~~~~~~~~~aDiIil~v~~~~--~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~ 137 (274)
..+++.+.+++||+||+|+|++. .++++.++.+.++++++|++.+++++++.+.+.++ ..++++.||..|.......
T Consensus 90 ~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~ 169 (302)
T 1f0y_A 90 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLV 169 (302)
T ss_dssp EESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEE
T ss_pred EecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceE
Confidence 56677778899999999998754 56788889888889999999889999998887665 3468899998887654444
Q ss_pred eEEecCCCCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 024016 138 TVMSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQ 213 (274)
Q Consensus 138 ~~i~~~~~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~ 213 (274)
.++.++..+++.++.+.++++.+|+. +++.+.. . . + .+.++..++.-....+.+.|+++++...++..
T Consensus 170 -~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~-g-~--i---~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~ 238 (302)
T 1f0y_A 170 -EVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTP-G-F--I---VNRLLVPYLMEAIRLYERGDASKEDIDTAMKL 238 (302)
T ss_dssp -EEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCT-T-T--T---HHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred -EEeCCCCCCHHHHHHHHHHHHHcCCceEEecCcc-c-c--c---HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 45667777899999999999999975 6655421 1 0 0 11222222212222344666888887666543
No 47
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.86 E-value=1.4e-20 Score=162.94 Aligned_cols=241 Identities=18% Similarity=0.200 Sum_probs=152.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCH-------HHHHHHHHcCceecc-CchhhccCCCEEEEeeC
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSG-VLPPDRICTAVHSNL-------KRRDAFESIGVKVLS-DNNAVVEYSDVVVFSVK 80 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g-~~~~~~v~v~~~r~~-------~~~~~l~~~g~~~~~-~~~~~~~~aDiIil~v~ 80 (274)
+|||+|||+|.||.+|+.+|.++| + +|++| ||++ +..+.+.+.|+ .+ ++.+++++||+||+|||
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~----~V~~~-dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp 96 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAA----RLAAY-DLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVV 96 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCS----EEEEE-CGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCC----eEEEE-eCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecC
Confidence 479999999999999999999999 9 99999 9998 55666666787 56 78899999999999999
Q ss_pred cccHHHHHHHhccccCCCCEEEEecCCCCHH---HHHHhhC--CCceEEE-cCC-cHHhhcCCceEEecCCCCCHHHHHH
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLVSVAAGVKLK---DLQEWTG--HSRFIRV-MPN-TPSAVGEAATVMSLGGTATEEDGEL 153 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vis~~~g~~~~---~l~~~~~--~~~~~~~-~p~-~~~~~~~g~~~i~~~~~~~~~~~~~ 153 (274)
++...+++.++.+.++++++||+++ ++++. .+.+.+. +..++.. +.. .+.. ....++++.++ ++ +.
T Consensus 97 ~~~~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~-~g~l~i~vgg~---~~--~~ 169 (317)
T 4ezb_A 97 GAATKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIATGKGSFVEGAVMARVPPY-AEKVPILVAGR---RA--VE 169 (317)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTT-GGGSEEEEEST---TH--HH
T ss_pred CHHHHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHHcCCeEEeccCCCCchhh-cCCEEEEEeCC---hH--HH
Confidence 9988888899999999999999875 45543 3444443 2233321 111 1211 22345555553 23 88
Q ss_pred HHHHhhhcCCe-EEcCc-cchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHH-HHHHHHhcCC
Q 024016 154 IGKLFGSVGKI-WRADE-KLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLASQTVLG-AASMVTKSGK 227 (274)
Q Consensus 154 v~~ll~~~g~~-~~~~e-~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~~~~~~-~~~~~~~~~~ 227 (274)
++++|+.+|.. +++++ ........++ .+.+....+..+.|+ +.+.|++++ ..+.+..+..+ .....
T Consensus 170 ~~~ll~~~g~~v~~~g~~~g~a~~~Kl~--~N~~~~~~~~~~~E~~~la~~~Gid~~-~~~~l~~~~~~~~~~~~----- 241 (317)
T 4ezb_A 170 VAERLNALGMNLEAVGETPGQASSLKMI--RSVMIKGVEALLIEALSSAERAGVTER-ILDSVQETFPGLDWRDV----- 241 (317)
T ss_dssp HHHHHHTTTCEEEEEESSTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHSTTSCHHHH-----
T ss_pred HHHHHHHhCCCeEEeCCCcCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHhcCccccHHHh-----
Confidence 99999999975 67775 3444444433 244555555555555 568999985 44444433211 11100
Q ss_pred ChHHHHHhcCCCCch----HHHHHHHHHhCCHHHHHHHHHHHH----HHHHhhc
Q 024016 228 HPGQLKDDVASPGGT----TIAGIHELEKSGFRGILMNAVVAA----AKRSREL 273 (274)
Q Consensus 228 ~~~~~~~~~~~~~g~----t~~~l~~l~~~~~~~~~~~a~~~~----~~r~~~~ 273 (274)
...+.+..+.|++. ....++..++.|+...+.+++.+. +++..+.
T Consensus 242 -~~~~~~~~~~~g~~~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~a~~~~~~~ 294 (317)
T 4ezb_A 242 -ADYYLSRTFEHGARRVTEMTEAAETIESFGLNAPMSRAACETIAAAHAAMKDQ 294 (317)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHTTS
T ss_pred -hhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHc
Confidence 11122222234332 222344455567776777776666 6655443
No 48
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.86 E-value=5.9e-20 Score=166.35 Aligned_cols=194 Identities=12% Similarity=0.168 Sum_probs=141.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc---C--ceeccCchhhcc---CCCEEEEeeC
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI---G--VKVLSDNNAVVE---YSDVVVFSVK 80 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~---g--~~~~~~~~~~~~---~aDiIil~v~ 80 (274)
.+|+|||||+|.||.+|+.+|.++|| +|++| ||++++.+.+.+. + +..+.++.++++ ++|+||+|||
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~----~V~v~-dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGF----VVCAF-NRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence 46799999999999999999999999 99999 9999999998874 3 334577888776 5999999999
Q ss_pred cc-cHHHHHHHhccccCCCCEEEEecCCCCHH--HHHHhhC--CCceEEE-cCCcHHhhcCCceEEecCCCCCHHHHHHH
Q 024016 81 PQ-VVKDVAMQIRPLLSRKKLLVSVAAGVKLK--DLQEWTG--HSRFIRV-MPNTPSAVGEAATVMSLGGTATEEDGELI 154 (274)
Q Consensus 81 ~~-~~~~v~~~i~~~l~~~~~vis~~~g~~~~--~l~~~~~--~~~~~~~-~p~~~~~~~~g~~~i~~~~~~~~~~~~~v 154 (274)
+. .+++++.++.+.++++++||+++++.... .+.+.+. +..++.. +...+.....|..++..+ +++.++.+
T Consensus 78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~~im~GG---~~ea~~~v 154 (484)
T 4gwg_A 78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSLMPGG---NKEAWPHI 154 (484)
T ss_dssp SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEEEE---CGGGHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCCeeecCC---CHHHHHHH
Confidence 85 79999999999999999999987765432 3333332 3444443 123344445666555544 68899999
Q ss_pred HHHhhhcCC-e-------EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHH
Q 024016 155 GKLFGSVGK-I-------WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVA-AGLPRELALGLAS 212 (274)
Q Consensus 155 ~~ll~~~g~-~-------~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~-~Gl~~~~~~~~~~ 212 (274)
+++|+.+|. . +++++......+.++. +.+.+..+..+.|+ +++ .|++.++..+++.
T Consensus 155 ~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~--N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~ 222 (484)
T 4gwg_A 155 KTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVH--NGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFE 222 (484)
T ss_dssp HHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHhcCcccCCCceEEEECCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 999999985 3 4566544444444432 44555556666665 456 8999999888763
No 49
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.86 E-value=5.2e-20 Score=156.81 Aligned_cols=186 Identities=18% Similarity=0.167 Sum_probs=139.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-------CceeccCchhhccCCCEEEEeeCcc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-------GVKVLSDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~-------g~~~~~~~~~~~~~aDiIil~v~~~ 82 (274)
.+||+|||+|.||++||.+|. +|+ +|++| ||++++++.+.+. +++.++++.+ +++||+||.|+|.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~----~V~v~-d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~ 84 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKH----EVVLQ-DVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFED 84 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS----EEEEE-CSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCC----EEEEE-ECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCC
Confidence 479999999999999999999 999 99999 9999999888776 7777778876 88999999999865
Q ss_pred c-HH-HHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhh
Q 024016 83 V-VK-DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFG 159 (274)
Q Consensus 83 ~-~~-~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~ 159 (274)
. ++ .++.++.+. +++++++.+++++++.+++.+. ..+++..|+..|.... ....++++..++++.++.++++++
T Consensus 85 ~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~-~lveiv~g~~t~~~~~~~~~~l~~ 161 (293)
T 1zej_A 85 LNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVM-PLVEIVISRFTDSKTVAFVEGFLR 161 (293)
T ss_dssp HHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTC-CEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccC-CEEEEECCCCCCHHHHHHHHHHHH
Confidence 4 44 455666554 8888888888899998877654 2457777776665433 344566777789999999999999
Q ss_pred hcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 024016 160 SVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTV 215 (274)
Q Consensus 160 ~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~ 215 (274)
.+|+. +++++. -+. ...+...+.|++. .+.+ |+++++..+++..++
T Consensus 162 ~lGk~~v~v~d~---fi~-----Nrll~~~~~EA~~-l~~~-Gv~~e~id~~~~~g~ 208 (293)
T 1zej_A 162 ELGKEVVVCKGQ---SLV-----NRFNAAVLSEASR-MIEE-GVRAEDVDRVWKHHL 208 (293)
T ss_dssp HTTCEEEEEESS---CHH-----HHHHHHHHHHHHH-HHHH-TCCHHHHHHHHHTTH
T ss_pred HcCCeEEEeccc---ccH-----HHHHHHHHHHHHH-HHHh-CCCHHHHHHHHHhcC
Confidence 99975 777653 110 1112223344443 2334 889999888886544
No 50
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.86 E-value=4.1e-20 Score=168.21 Aligned_cols=195 Identities=11% Similarity=0.104 Sum_probs=145.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc----CceeccCchhhccC---CCEEEEeeC
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI----GVKVLSDNNAVVEY---SDVVVFSVK 80 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~----g~~~~~~~~~~~~~---aDiIil~v~ 80 (274)
|+++||||||+|.||.+|+.+|.++|+ +|.+| +|++++.+.+.+. |+..+.++.++++. +|+||+|||
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G~----~V~v~-dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp 77 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRGY----TVAIY-NRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQ 77 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCC
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCCC----EEEEE-cCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEcc
Confidence 445799999999999999999999999 99999 9999999988874 78777888888775 999999999
Q ss_pred c-ccHHHHHHHhccccCCCCEEEEecCCCCH--HHHHHhhC--CCceEEEcCC--cHHhhcCCceEEecCCCCCHHHHHH
Q 024016 81 P-QVVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGEL 153 (274)
Q Consensus 81 ~-~~~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~i~~~~~~~~~~~~~ 153 (274)
+ +.++++++++.+.++++++||+++++... ..+.+.++ +..++. +|. .|.....|.+++..+ +++..+.
T Consensus 78 ~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~-~pv~gg~~~a~~g~~i~~gg---~~~~~~~ 153 (474)
T 2iz1_A 78 AGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIG-TGVSGGEKGALLGPSMMPGG---QKEAYDL 153 (474)
T ss_dssp TTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEE-EEECSHHHHHHHCCCEEEEE---CHHHHHH
T ss_pred CchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEEC-CCCCCChhhhccCCeEEecC---CHHHHHH
Confidence 8 57999999999999999999998877643 45656564 233332 243 344455666555443 6889999
Q ss_pred HHHHhhhcCCe---------EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHH-cCCCHHHHHHHHHH
Q 024016 154 IGKLFGSVGKI---------WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVA-AGLPRELALGLASQ 213 (274)
Q Consensus 154 v~~ll~~~g~~---------~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~-~Gl~~~~~~~~~~~ 213 (274)
++++|+.+|.. .++++........+.. +.+.+..+..+.|+ +++ .|++++++.+++..
T Consensus 154 v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~--N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~ 224 (474)
T 2iz1_A 154 VAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVH--NGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEE 224 (474)
T ss_dssp HHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCceEEEECCccHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 99999999854 3445433333333332 34445556677776 567 79999998888753
No 51
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.85 E-value=1.3e-20 Score=157.37 Aligned_cols=156 Identities=13% Similarity=0.158 Sum_probs=121.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHH--------------HHHHHH-cCceeccCchhhccC
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKR--------------RDAFES-IGVKVLSDNNAVVEY 71 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~--------------~~~l~~-~g~~~~~~~~~~~~~ 71 (274)
.+..+||+|||+|+||.+|+++|.++|+ +|++| +|++++ .+.+.+ .+.....++.+++++
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 90 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGH----EVTIG-TRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAG 90 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhc
Confidence 3456899999999999999999999999 99999 999987 555554 455556678888999
Q ss_pred CCEEEEeeCcccHHHHHHHh-ccccCCCCEEEEecCCC----------------C-HHHHHHhhCCCceEEEcCCcHHhh
Q 024016 72 SDVVVFSVKPQVVKDVAMQI-RPLLSRKKLLVSVAAGV----------------K-LKDLQEWTGHSRFIRVMPNTPSAV 133 (274)
Q Consensus 72 aDiIil~v~~~~~~~v~~~i-~~~l~~~~~vis~~~g~----------------~-~~~l~~~~~~~~~~~~~p~~~~~~ 133 (274)
||+||+|||++.+.+++.++ .+.+ ++++||++++++ . .+.+++.+++.++++.+++.+..+
T Consensus 91 aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~a~v 169 (245)
T 3dtt_A 91 AELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMNASL 169 (245)
T ss_dssp CSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSCHHH
T ss_pred CCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccCHHH
Confidence 99999999999999999888 6767 889999998643 2 356778888788999888765433
Q ss_pred c-------CCc-eEEecCCCCCHHHHHHHHHHhhhcCC-e-EEcCcc
Q 024016 134 G-------EAA-TVMSLGGTATEEDGELIGKLFGSVGK-I-WRADEK 170 (274)
Q Consensus 134 ~-------~g~-~~i~~~~~~~~~~~~~v~~ll~~~g~-~-~~~~e~ 170 (274)
. .|. +.++.++ +++..+.++++|+.+|. . +++++-
T Consensus 170 ~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~~ 214 (245)
T 3dtt_A 170 MVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLGDI 214 (245)
T ss_dssp HHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEESG
T ss_pred hcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccCcH
Confidence 2 222 2444443 68999999999999994 4 677653
No 52
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.84 E-value=4.9e-19 Score=156.29 Aligned_cols=152 Identities=12% Similarity=0.158 Sum_probs=117.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC--------------ceeccCchhhccCCCEEE
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG--------------VKVLSDNNAVVEYSDVVV 76 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g--------------~~~~~~~~~~~~~aDiIi 76 (274)
+||+|||+|+||.+|+.+|.++|| +|++| +|++++.+.+.+.+ +...+++.++++++|+||
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G~----~V~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVi 90 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKCR----EVCVW-HMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIIL 90 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTEE----EEEEE-CSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEE
Confidence 399999999999999999999999 99999 99999988887642 455567778888999999
Q ss_pred EeeCcccHHHHHHH----hccccCC-CCEEEEecCCCCHH---HHHH----hhCCC-ceEEEcCCcHHhhcCCce-EEec
Q 024016 77 FSVKPQVVKDVAMQ----IRPLLSR-KKLLVSVAAGVKLK---DLQE----WTGHS-RFIRVMPNTPSAVGEAAT-VMSL 142 (274)
Q Consensus 77 l~v~~~~~~~v~~~----i~~~l~~-~~~vis~~~g~~~~---~l~~----~~~~~-~~~~~~p~~~~~~~~g~~-~i~~ 142 (274)
+|||++++++++.+ +.+.+++ +++||++++|+..+ .+.+ .++.. ..++..|+.+.....|.. .+..
T Consensus 91 lav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~~~g~~~~~~~ 170 (366)
T 1evy_A 91 FVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSI 170 (366)
T ss_dssp ECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHTTCCEEEEE
T ss_pred ECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHHHhCCceEEEE
Confidence 99999999999998 9888888 89999999887753 2222 23321 245677888776666643 2222
Q ss_pred CCCCCHHHHHHHHHHhhhc--CCeEEcC
Q 024016 143 GGTATEEDGELIGKLFGSV--GKIWRAD 168 (274)
Q Consensus 143 ~~~~~~~~~~~v~~ll~~~--g~~~~~~ 168 (274)
+ ..+++..+.++++|+.. |..++..
T Consensus 171 ~-~~~~~~~~~v~~ll~~~g~g~~~~~~ 197 (366)
T 1evy_A 171 A-SADINVARRLQRIMSTGDRSFVCWAT 197 (366)
T ss_dssp E-CSSHHHHHHHHHHHSCTTSSEEEEEE
T ss_pred e-cCCHHHHHHHHHHhcCCCCeEEEEEc
Confidence 2 23678899999999999 6544333
No 53
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.84 E-value=2.5e-19 Score=163.42 Aligned_cols=191 Identities=12% Similarity=0.129 Sum_probs=142.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cCceeccCchhhc---cCCCEEEEeeCcc
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IGVKVLSDNNAVV---EYSDVVVFSVKPQ 82 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-----~g~~~~~~~~~~~---~~aDiIil~v~~~ 82 (274)
|||+|||+|.||++|+.+|.++|+ +|++| +|++++.+.+.+ .|+..+.++.+++ +++|+||+|||+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~----~V~v~-dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~ 77 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF----VVCAF-NRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAG 77 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCCh
Confidence 689999999999999999999999 99999 999999999887 6777778888876 4899999999985
Q ss_pred -cHHHHHHHhccccCCCCEEEEecCCCCH--HHHHHhhC--CCceEEEcCC--cHHhhcCCceEEecCCCCCHHHHHHHH
Q 024016 83 -VVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGELIG 155 (274)
Q Consensus 83 -~~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~i~~~~~~~~~~~~~v~ 155 (274)
.+++++.++.+.++++++||+++++... ..+.+.++ +..++. +|. .+...+.|.+++..+ +++..+.++
T Consensus 78 ~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~-~pv~g~~~~a~~g~~i~~gg---~~e~~~~v~ 153 (482)
T 2pgd_A 78 QAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVG-SGVSGGEDGARYGPSLMPGG---NKEAWPHIK 153 (482)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-EEEESHHHHHHHCCEEEEEE---CTTTHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeC-CCCCCChhhhccCCeEEeCC---CHHHHHHHH
Confidence 7999999999999999999998887754 34555443 233442 343 345556676555444 577899999
Q ss_pred HHhhhcCCeE--------EcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHc-CCCHHHHHHHHH
Q 024016 156 KLFGSVGKIW--------RADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAA-GLPRELALGLAS 212 (274)
Q Consensus 156 ~ll~~~g~~~--------~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~-Gl~~~~~~~~~~ 212 (274)
++|+.+|..+ ++++........+.. +.+.+..+..+.|+ +++. |++++++.+++.
T Consensus 154 ~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~--N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~ 220 (482)
T 2pgd_A 154 AIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVH--NGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFE 220 (482)
T ss_dssp HHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHhhhhccCCCcceEEECCCcHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 9999999642 344433333333322 34445556677776 5677 999998888875
No 54
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.84 E-value=2.2e-20 Score=159.56 Aligned_cols=247 Identities=11% Similarity=0.078 Sum_probs=157.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc---Cc----eeccCchhhccCCCEEEEeeCccc
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI---GV----KVLSDNNAVVEYSDVVVFSVKPQV 83 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~---g~----~~~~~~~~~~~~aDiIil~v~~~~ 83 (274)
|||+|||+|+||++|+.+|.++|+ +|++| +|++++.+.+... |. .+..+..+.++++|+||+|||++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~----~V~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~ 75 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGH----EVQGW-LRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQ 75 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC----CEEEE-EcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHh
Confidence 589999999999999999999999 99999 9998766544332 21 112233566789999999999999
Q ss_pred HHHHHHHhccccCCCCEEEEecCCCCH-HHHHHhhCC----C---ceEEEcCCcHHhhcCCceEEecCCCCCHHHHHHHH
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAAGVKL-KDLQEWTGH----S---RFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIG 155 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~g~~~-~~l~~~~~~----~---~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~ 155 (274)
++++++++.+.++++++||++++|+.. +.+++.++. . ...+..| .+...+.|.+.+.... .+++..+.++
T Consensus 76 ~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~g~~~i~~~~-~~~~~~~~~~ 153 (291)
T 1ks9_A 76 VSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGN-VIIHVANGITHIGPAR-QQDGDYSYLA 153 (291)
T ss_dssp HHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCSCEEEEEECCEEEEETT-EEEEEECCCEEEEESS-GGGTTCTHHH
T ss_pred HHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcCCeEEEEEeEccEEcCC-EEEEecccceEEccCC-CCcchHHHHH
Confidence 999999999999899999999999865 466665553 0 1123345 4445566665554322 2456778999
Q ss_pred HHhhhcCCeEEcCcc-------------chhhHHHhhcchHHHH----HHHHHHHHH---HHHHcCCCH--HHHHHHHHH
Q 024016 156 KLFGSVGKIWRADEK-------------LFDAITGLSGSGPAYI----FLAIEALAD---GGVAAGLPR--ELALGLASQ 213 (274)
Q Consensus 156 ~ll~~~g~~~~~~e~-------------~~~~~~a~~~~~~~~~----~~~~~~l~e---~~~~~Gl~~--~~~~~~~~~ 213 (274)
++|+.+|..++..++ .+|.++++.++....+ ..+...+.| .+++.|++. +...+.+..
T Consensus 154 ~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~ 233 (291)
T 1ks9_A 154 DILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQ 233 (291)
T ss_dssp HHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 999999976444444 4577777777643321 122233333 356789875 444444433
Q ss_pred HHHHHHHHHHhcCCChHHHHHhc---CC-CCchHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 024016 214 TVLGAASMVTKSGKHPGQLKDDV---AS-PGGTTIAGIHELEKSGFRGILMNAVVAAAKRS 270 (274)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~---~~-~~g~t~~~l~~l~~~~~~~~~~~a~~~~~~r~ 270 (274)
.+..+ ....+.++.+.. .+ -.......++.-++.|+...+.+.+.+.++..
T Consensus 234 ~~~~~------~~~~ssm~~d~~~g~~~e~~~~~g~~~~~a~~~gv~~P~~~~~~~~~~~~ 288 (291)
T 1ks9_A 234 VIDAT------AENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRK 288 (291)
T ss_dssp HHHHT------TTCCCHHHHHHHTTCCCSGGGTHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHhcC------CCCCChHHHHHHcCCccHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 32211 111223332211 11 11223344555666677777777777766543
No 55
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.83 E-value=3.2e-19 Score=154.15 Aligned_cols=244 Identities=15% Similarity=0.137 Sum_probs=158.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee--------------ccCchhhccCCCEEE
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV--------------LSDNNAVVEYSDVVV 76 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~--------------~~~~~~~~~~aDiIi 76 (274)
|||+|||+|+||++++..|.++|+ +|++| +|++ .+.+.+.|+.+ .++. +.+..+|+||
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~----~V~~~-~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~vi 74 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE----DVHFL-LRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDLVL 74 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC----CEEEE-CSTT--HHHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC----eEEEE-EcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCEEE
Confidence 699999999999999999999999 99999 9986 36676666432 1233 3467899999
Q ss_pred EeeCcccHHHHHHHhccccCCCCEEEEecCCCC-HHHHHHhhCCCceEEEc---------CCcHHhhcCCceEEecCCCC
Q 024016 77 FSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK-LKDLQEWTGHSRFIRVM---------PNTPSAVGEAATVMSLGGTA 146 (274)
Q Consensus 77 l~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~-~~~l~~~~~~~~~~~~~---------p~~~~~~~~g~~~i~~~~~~ 146 (274)
+|||+++++++++++.+.+.++++||++.+|+. .+.+++.++..++++.+ |+...+.+.|.+.+...+..
T Consensus 75 lavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~~ 154 (312)
T 3hn2_A 75 VGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPR 154 (312)
T ss_dssp ECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSCC
T ss_pred EecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCCC
Confidence 999999999999999999999999999999997 56788888855666554 44443444444444333333
Q ss_pred CHHHHHHHHHHhhhcCCeEEcCccc-------------hhhHHHhhcchHH-------HHHHHHHHHHHH---HHHcC--
Q 024016 147 TEEDGELIGKLFGSVGKIWRADEKL-------------FDAITGLSGSGPA-------YIFLAIEALADG---GVAAG-- 201 (274)
Q Consensus 147 ~~~~~~~v~~ll~~~g~~~~~~e~~-------------~~~~~a~~~~~~~-------~~~~~~~~l~e~---~~~~G-- 201 (274)
+.+..+.+.++|+..|..++.+++. ++.++++.++... ....+...+.|. +.+.|
T Consensus 155 ~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~va~a~G~~ 234 (312)
T 3hn2_A 155 DTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAGANAQGLA 234 (312)
T ss_dssp CSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHHHHTSCCS
T ss_pred ccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHHHHHcCCc
Confidence 4677788999999988766666654 5667777776443 222222233333 45788
Q ss_pred CCHH-HHHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCCchHH-----HHHHHHHhCCHHHHHHHHHHHHHHH
Q 024016 202 LPRE-LALGLASQTVLGAASMVTKSGKHPGQLKDDVASPGGTTI-----AGIHELEKSGFRGILMNAVVAAAKR 269 (274)
Q Consensus 202 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~-----~~l~~l~~~~~~~~~~~a~~~~~~r 269 (274)
++.+ ...+.+...... .....+.++.|.. ..+.+-. ..++.-++.|+...+.+.+.+.++.
T Consensus 235 ~~~~~~~~~~~~~~~~~------~~~~~sSM~qD~~-~gr~tEid~i~G~vv~~a~~~gv~~P~~~~l~~ll~~ 301 (312)
T 3hn2_A 235 TFIADGYVDDMLEFTDA------MGEYKPSMEIDRE-EGRPLEIAAIFRTPLAYGAREGIAMPRVEMLATLLEQ 301 (312)
T ss_dssp SCCCTTHHHHHHHHHTT------SCSCCCHHHHHHH-TTCCCCHHHHTHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHhc------CCCCCchHHHHHH-hCCCccHHHHhhHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 6533 222222211111 0112345554433 2222222 2345556677777777777666554
No 56
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.83 E-value=4.7e-20 Score=150.58 Aligned_cols=167 Identities=17% Similarity=0.249 Sum_probs=132.7
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC-------ceeccCchhhccCCCEEEEeeCc
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG-------VKVLSDNNAVVEYSDVVVFSVKP 81 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g-------~~~~~~~~~~~~~aDiIil~v~~ 81 (274)
|||+||| +|.||+++++.|.+.|+ +|++| +|++++.+.+.+ .+ +. ..+..++++++|+||+|+|+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH----EIVVG-SRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPW 74 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC----EEEEE-ESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCCh
Confidence 5899999 99999999999999998 99999 999988877765 23 33 34566778899999999999
Q ss_pred ccHHHHHHHhccccCCCCEEEEecCCCC--------------HHHHHHhhCCCceEEEcCCcHHhhcCC------ceEEe
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSVAAGVK--------------LKDLQEWTGHSRFIRVMPNTPSAVGEA------ATVMS 141 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~~~g~~--------------~~~l~~~~~~~~~~~~~p~~~~~~~~g------~~~i~ 141 (274)
+.+++++.++.+.+ ++++++++++|++ .+.+++.+++.++++.+|+.+.....+ .+.++
T Consensus 75 ~~~~~~~~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (212)
T 1jay_A 75 EHAIDTARDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPV 153 (212)
T ss_dssp HHHHHHHHHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTCCCCEEEEE
T ss_pred hhHHHHHHHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCCeEEEEccchHHHHhhCcCCCCCccEEE
Confidence 99999998887777 5889999998876 578888887678899887765544332 45566
Q ss_pred cCCCCCHHHHHHHHHHhhhc-CCe-EEcCccchhhHHHhhcchHHHHHH
Q 024016 142 LGGTATEEDGELIGKLFGSV-GKI-WRADEKLFDAITGLSGSGPAYIFL 188 (274)
Q Consensus 142 ~~~~~~~~~~~~v~~ll~~~-g~~-~~~~e~~~~~~~a~~~~~~~~~~~ 188 (274)
+++ +++..+.++++|+.+ |.. +++++ .+....+.+++|.|++.
T Consensus 154 ~g~--~~~~~~~v~~l~~~~~G~~~~~~~~--~~~a~~~k~~~~~~~~~ 198 (212)
T 1jay_A 154 CGD--DDESKKVVMSLISEIDGLRPLDAGP--LSNSRLVESLTPLILNI 198 (212)
T ss_dssp EES--CHHHHHHHHHHHHHSTTEEEEEEES--GGGHHHHHTHHHHHHHH
T ss_pred ECC--cHHHHHHHHHHHHHcCCCCceeccc--hhHHHHhcchHHHHHHH
Confidence 554 588899999999999 975 66665 56666777777776654
No 57
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.83 E-value=7e-19 Score=154.56 Aligned_cols=155 Identities=19% Similarity=0.222 Sum_probs=119.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCC-------CCCCCcEEEEeCCCHH-----HHHHHHHc--------------Cceec
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSG-------VLPPDRICTAVHSNLK-----RRDAFESI--------------GVKVL 62 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g-------~~~~~~v~v~~~r~~~-----~~~~l~~~--------------g~~~~ 62 (274)
.+|||+|||+|+||++|+..|.++| + +|++| +|+++ +.+.+.+. ++...
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~----~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDP----RVTMW-VFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAV 81 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEE----EEEEE-CCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCC----eEEEE-EcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEE
Confidence 4579999999999999999999999 8 99999 99988 77777642 23445
Q ss_pred cCchhhccCCCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCCCCH---------HHHHHhhCCCceEEEcCCcHHhh
Q 024016 63 SDNNAVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL---------KDLQEWTGHSRFIRVMPNTPSAV 133 (274)
Q Consensus 63 ~~~~~~~~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~---------~~l~~~~~~~~~~~~~p~~~~~~ 133 (274)
+++.++++++|+||+|||++.+++++.++.+.++++++||++++|+.. +.+.+.++....++..|+.+...
T Consensus 82 ~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a~~v 161 (354)
T 1x0v_A 82 PDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIPMSVLMGANIASEV 161 (354)
T ss_dssp SSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCCEEEEECSCCHHHH
T ss_pred cCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCCEEEEECCCcHHHH
Confidence 677778889999999999999999999999989899999999988763 22344444223567789988777
Q ss_pred cCCc-eEEecCCCCCHHHHHHHHHHhhhcCCeEEcCc
Q 024016 134 GEAA-TVMSLGGTATEEDGELIGKLFGSVGKIWRADE 169 (274)
Q Consensus 134 ~~g~-~~i~~~~~~~~~~~~~v~~ll~~~g~~~~~~e 169 (274)
..|. +.++.+ ..+++..+.++++|+..|..++..+
T Consensus 162 ~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~ 197 (354)
T 1x0v_A 162 ADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQ 197 (354)
T ss_dssp HTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEES
T ss_pred HhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcC
Confidence 6664 333332 2467888999999999996544333
No 58
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.83 E-value=3.2e-19 Score=162.12 Aligned_cols=190 Identities=16% Similarity=0.099 Sum_probs=140.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----------cC-------------ceeccC
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----------IG-------------VKVLSD 64 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-----------~g-------------~~~~~~ 64 (274)
+.+||+|||+|.||++||..|.++|+ +|++| ||++++++.+.+ .| ++..++
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~----~V~l~-D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGH----QVLLY-DISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTD 78 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC----eEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCC
Confidence 45799999999999999999999999 99999 999998877543 22 344555
Q ss_pred chhhccCCCEEEEeeCcc--cHHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEe
Q 024016 65 NNAVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMS 141 (274)
Q Consensus 65 ~~~~~~~aDiIil~v~~~--~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~ 141 (274)
. +.+++||+||+|||++ ..++++.++.+.+++++++++.+++++++.+++.+. ..++++.||..|..... ...++
T Consensus 79 ~-~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~-Lvevv 156 (483)
T 3mog_A 79 I-HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMK-LVEVV 156 (483)
T ss_dssp G-GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCC-EEEEE
T ss_pred H-HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCC-eEEEe
Confidence 5 4688999999999876 346888999888999999889899999998887765 35788999988776543 45567
Q ss_pred cCCCCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHHH
Q 024016 142 LGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIFL-AIEALADGGVAAGLPRELALGLASQ 213 (274)
Q Consensus 142 ~~~~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~-~~~~l~e~~~~~Gl~~~~~~~~~~~ 213 (274)
.+...+++.++.+.++++.+|+. +++++.. . .. .+.++.. +.+++ ..+.+.+.++++..+.+..
T Consensus 157 ~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~-G----fi--~Nr~l~~~~~Ea~-~l~~~g~~~~~~id~a~~~ 222 (483)
T 3mog_A 157 SGLATAAEVVEQLCELTLSWGKQPVRCHSTP-G----FI--VNRVARPYYSEAW-RALEEQVAAPEVIDAALRD 222 (483)
T ss_dssp ECSSCCHHHHHHHHHHHHHTTCEEEEEESCT-T----TT--HHHHTHHHHHHHH-HHHHTTCSCHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhCCEEEEEeccC-c----ch--HHHHHHHHHHHHH-HHHHhCCCCHHHHHHHHHh
Confidence 77778999999999999999985 6665421 0 10 1122211 22222 2244566677777666653
No 59
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.83 E-value=1.8e-18 Score=155.37 Aligned_cols=189 Identities=13% Similarity=0.106 Sum_probs=140.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH--------HHHHcC-------------ceeccCchh
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD--------AFESIG-------------VKVLSDNNA 67 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~--------~l~~~g-------------~~~~~~~~~ 67 (274)
..+||+|||+|.||++||..|.++|+ +|++| |+++++.. ++.+.| ++.+++. +
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~----~V~l~-D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~ 126 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGI----ETFLV-VRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-H 126 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-G
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC----eEEEE-ECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-H
Confidence 45799999999999999999999999 99999 99998432 233333 2455666 4
Q ss_pred hccCCCEEEEeeCcc--cHHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEecCC
Q 024016 68 VVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGG 144 (274)
Q Consensus 68 ~~~~aDiIil~v~~~--~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~~~~ 144 (274)
.+++||+||+|||.+ ..++++.++.+.++++++++|.++++++..+++.++ ..+++..||..|..... ...++++.
T Consensus 127 al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~-LvEIv~g~ 205 (460)
T 3k6j_A 127 KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIR-LVEIIYGS 205 (460)
T ss_dssp GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCC-EEEEECCS
T ss_pred HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCC-EEEEEeCC
Confidence 688999999999854 356788899999999999999989999999887775 35789999988876543 34466777
Q ss_pred CCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHH
Q 024016 145 TATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYI-FLAIEALADGGVAAGLPRELALGLAS 212 (274)
Q Consensus 145 ~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~-~~~~~~l~e~~~~~Gl~~~~~~~~~~ 212 (274)
..++++++.+.++++.+|+. +++.+. -.-+ .+.++ ..+.+++. .+.+.|+++++..+++.
T Consensus 206 ~Ts~e~~~~~~~l~~~lGk~~v~v~d~-pGfi------~Nril~~~~~EA~~-l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 206 HTSSQAIATAFQACESIKKLPVLVGNC-KSFV------FNRLLHVYFDQSQK-LMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEESSC-CHHH------HHHHHHHHHHHHHH-HHHTSCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCEEEEEecc-cHHH------HHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHH
Confidence 78999999999999999986 666642 1110 01111 22223322 23478999998888775
No 60
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.83 E-value=7.8e-19 Score=155.52 Aligned_cols=154 Identities=15% Similarity=0.126 Sum_probs=118.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-------CCCCCcEEEEeCCCHH-----HHHHHHHc--------------Cceecc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSG-------VLPPDRICTAVHSNLK-----RRDAFESI--------------GVKVLS 63 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g-------~~~~~~v~v~~~r~~~-----~~~~l~~~--------------g~~~~~ 63 (274)
+|||+|||+|+||++|+..|.++| + +|++| +|+++ +.+.+.+. ++..++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~----~V~~~-~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 95 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFEN----EVRMW-IRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHS 95 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCS----CEEEE-CCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCC----eEEEE-ECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEEC
Confidence 368999999999999999999999 8 99999 99988 78777652 345566
Q ss_pred CchhhccCCCEEEEeeCcccHHHHHHHhcc----ccCCCCEEEEecCCCCH-----HHH----HHhhCCCceEEEcCCcH
Q 024016 64 DNNAVVEYSDVVVFSVKPQVVKDVAMQIRP----LLSRKKLLVSVAAGVKL-----KDL----QEWTGHSRFIRVMPNTP 130 (274)
Q Consensus 64 ~~~~~~~~aDiIil~v~~~~~~~v~~~i~~----~l~~~~~vis~~~g~~~-----~~l----~~~~~~~~~~~~~p~~~ 130 (274)
++.++++++|+||+|||++++++++.++.+ .+++++++|++++|++. +.+ .+.++....++..|+.+
T Consensus 96 ~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a 175 (375)
T 1yj8_A 96 DLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIPCSALSGANIA 175 (375)
T ss_dssp STHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSCEEEEECSCCH
T ss_pred CHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCCEEEEeCCchH
Confidence 777888999999999999999999999998 88899999999988765 222 33333123456778888
Q ss_pred HhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCeEEcC
Q 024016 131 SAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRAD 168 (274)
Q Consensus 131 ~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~~~~~ 168 (274)
.....|....+.....+++..+.++++|+..|..++..
T Consensus 176 ~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~ 213 (375)
T 1yj8_A 176 MDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCV 213 (375)
T ss_dssp HHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEE
T ss_pred HHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEEe
Confidence 77666653222111236788899999999998654433
No 61
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.82 E-value=6.5e-19 Score=153.51 Aligned_cols=149 Identities=15% Similarity=0.203 Sum_probs=117.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHHcCc-----------eecc--CchhhccCCCEE
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFESIGV-----------KVLS--DNNAVVEYSDVV 75 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r--~~~~~~~l~~~g~-----------~~~~--~~~~~~~~aDiI 75 (274)
|||+|||+|+||++++..|.++|+ +|++| +| ++++.+.+.+.|. ...+ ++.++++++|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~v 75 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGN----EVRIW-GTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVV 75 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCC----EEEEE-CCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC----eEEEE-EccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEE
Confidence 589999999999999999999999 99999 99 9999988887553 4444 566778899999
Q ss_pred EEeeCcccHHHHHHHhccccCCCCEEEEecCCC---C---HHHHHHhhCC------CceEEEcCCcHHhhcCCc-eEEec
Q 024016 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV---K---LKDLQEWTGH------SRFIRVMPNTPSAVGEAA-TVMSL 142 (274)
Q Consensus 76 il~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~---~---~~~l~~~~~~------~~~~~~~p~~~~~~~~g~-~~i~~ 142 (274)
|+|||++.+++++.++.+ ++++++||++++|+ + .+.+.+.++. ....+..|+.+...+.|. +.++.
T Consensus 76 i~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~g~~~~~~~ 154 (335)
T 1txg_A 76 LLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREVAKRMPTTVVF 154 (335)
T ss_dssp EECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHHHTTCCEEEEE
T ss_pred EEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHHHccCCcEEEE
Confidence 999999999999999999 98899999998888 3 3566666542 124566788877666554 33333
Q ss_pred CCCCCHHHHHHHHHHhhhcCCeEE
Q 024016 143 GGTATEEDGELIGKLFGSVGKIWR 166 (274)
Q Consensus 143 ~~~~~~~~~~~v~~ll~~~g~~~~ 166 (274)
+. .+++..+.++++|+..|..++
T Consensus 155 ~~-~~~~~~~~~~~ll~~~g~~~~ 177 (335)
T 1txg_A 155 SS-PSESSANKMKEIFETEYFGVE 177 (335)
T ss_dssp EC-SCHHHHHHHHHHHCBTTEEEE
T ss_pred Ee-CCHHHHHHHHHHhCCCcEEEE
Confidence 32 367889999999999886533
No 62
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.82 E-value=6.8e-19 Score=160.23 Aligned_cols=191 Identities=13% Similarity=0.142 Sum_probs=140.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-C-------ceeccCchhhcc---CCCEEEEee
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-G-------VKVLSDNNAVVE---YSDVVVFSV 79 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~-g-------~~~~~~~~~~~~---~aDiIil~v 79 (274)
|||||||+|.||++|+.+|.++|+ +|++| +|++++.+.+.+. | +..+.++.++++ ++|+||+||
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~----~V~v~-dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaV 76 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGF----KVAVF-NRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILV 76 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred CEEEEEChHHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEec
Confidence 589999999999999999999999 99999 9999999888763 6 666778878776 499999999
Q ss_pred Ccc-cHHHHHHHhccccCCCCEEEEecCCCCH--HHHHHhhC--CCceEEEcCC--cHHhhcCCceEEecCCCCCHHHHH
Q 024016 80 KPQ-VVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG--HSRFIRVMPN--TPSAVGEAATVMSLGGTATEEDGE 152 (274)
Q Consensus 80 ~~~-~~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~~~--~~~~~~~~p~--~~~~~~~g~~~i~~~~~~~~~~~~ 152 (274)
|+. .++++++++.+.++++++||+++++... +.+.+.++ +..++. +|. .|.....|.+++..+ +++..+
T Consensus 77 p~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~-~pv~gg~~~a~~g~~i~~gg---~~~~~~ 152 (478)
T 1pgj_A 77 QAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG-MGISGGEEGARKGPAFFPGG---TLSVWE 152 (478)
T ss_dssp CCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE-EEEESHHHHHHHCCEEEEEE---CHHHHH
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEE-eeccCCHHHHhcCCeEeccC---CHHHHH
Confidence 985 7999999999989999999998887743 34555553 233332 232 344445566555443 688899
Q ss_pred HHHHHhhhcCCe--------EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHH
Q 024016 153 LIGKLFGSVGKI--------WRADEKLFDAITGLSGSGPAYIFLAIEALADG---GVAAGLPRELALGLAS 212 (274)
Q Consensus 153 ~v~~ll~~~g~~--------~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~~~Gl~~~~~~~~~~ 212 (274)
.++++|+.+|.. .++++........+.. +.+.+..+..+.|+ +.+.|++++++.+++.
T Consensus 153 ~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~--N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~ 221 (478)
T 1pgj_A 153 EIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYH--NSGEYAILQIWGEVFDILRAMGLNNDEVAAVLE 221 (478)
T ss_dssp HHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHH--HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 999999999853 4555544333333322 33444445556665 5689999998888876
No 63
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.68 E-value=2.7e-21 Score=156.62 Aligned_cols=150 Identities=14% Similarity=0.223 Sum_probs=119.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
..|||+|||+|+||++|+++|.+.|+ +|++| +|+++ .+.+...|+... ++.++++++|+||+|||++++++++
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~----~V~~~-~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~~~~~v~ 90 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGY----SVVFG-SRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHREHYDFLA 90 (201)
Confidence 35799999999999999999999998 99999 99987 555555676655 6778888999999999998888887
Q ss_pred HHhccccCCCCEEEEecCCCC--------HHHHHHhhCCCceEEEcCCcHHhhcC-Cc-----eEEecCCCCCHHHHHHH
Q 024016 89 MQIRPLLSRKKLLVSVAAGVK--------LKDLQEWTGHSRFIRVMPNTPSAVGE-AA-----TVMSLGGTATEEDGELI 154 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~--------~~~l~~~~~~~~~~~~~p~~~~~~~~-g~-----~~i~~~~~~~~~~~~~v 154 (274)
++.+ ..++++||++++|++ .+.+++.+++.++++.+|+.|..... |. +.++.+. +++.++.+
T Consensus 91 -~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~~vvra~~n~~a~~~~~g~l~g~~~~~~~g~--~~~~~~~v 166 (201)
T 2yjz_A 91 -ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGAHVVKAFNTISAWALQSGTLDASRQVFVCGN--DSKAKDRV 166 (201)
Confidence 5544 347889999999986 36677777767899999999887654 44 1344443 57888999
Q ss_pred HHHhhhcCCe-EEcCc
Q 024016 155 GKLFGSVGKI-WRADE 169 (274)
Q Consensus 155 ~~ll~~~g~~-~~~~e 169 (274)
+++|+.+|.. +++++
T Consensus 167 ~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 167 MDIARTLGLTPLDQGS 182 (201)
Confidence 9999999965 66654
No 64
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.79 E-value=4.9e-18 Score=148.13 Aligned_cols=168 Identities=19% Similarity=0.257 Sum_probs=120.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-------------ccCchhhccCCCEE
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-------------LSDNNAVVEYSDVV 75 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-------------~~~~~~~~~~aDiI 75 (274)
++|||+|||+|+||++++..|.++|+ +|++| +|+ ++.+.+.+.|+.+ .+++.+ +.++|+|
T Consensus 2 ~~mkI~IiGaG~~G~~~a~~L~~~g~----~V~~~-~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V 74 (335)
T 3ghy_A 2 SLTRICIVGAGAVGGYLGARLALAGE----AINVL-ARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVV 74 (335)
T ss_dssp CCCCEEEESCCHHHHHHHHHHHHTTC----CEEEE-CCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-ECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEE
Confidence 46899999999999999999999999 99999 996 6777777766543 234444 5889999
Q ss_pred EEeeCcccHHHHHHHhccccCCCCEEEEecCCCC--------------------HHHHHHhhCCCceEEE---------c
Q 024016 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK--------------------LKDLQEWTGHSRFIRV---------M 126 (274)
Q Consensus 76 il~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~--------------------~~~l~~~~~~~~~~~~---------~ 126 (274)
|+|||+++++++++++.+.++++++||++++|++ .+.+.+.+|..+++.. -
T Consensus 75 ilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~gv~~~~a~~~~ 154 (335)
T 3ghy_A 75 IVAVKAPALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGCVVHLTCATVS 154 (335)
T ss_dssp EECCCHHHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEEEEECCCEEESS
T ss_pred EEeCCchhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEEEEEEEEEEEcC
Confidence 9999999999999999999999999999999963 2357777775454432 1
Q ss_pred CCcHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCeEEcCcc-------------chhhHHHhhcchH
Q 024016 127 PNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEK-------------LFDAITGLSGSGP 183 (274)
Q Consensus 127 p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~~~~~e~-------------~~~~~~a~~~~~~ 183 (274)
|+...+.+.|.+.+......+.+..+.+.++|+..|..++..++ .+|.+++++++..
T Consensus 155 pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~ 224 (335)
T 3ghy_A 155 PGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATC 224 (335)
T ss_dssp TTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCH
T ss_pred CcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCCh
Confidence 33322333343333322223456778899999998876555443 2456666666533
No 65
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.79 E-value=7.5e-19 Score=143.98 Aligned_cols=145 Identities=11% Similarity=0.146 Sum_probs=114.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHHHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVAM 89 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~~ 89 (274)
.|||+|||+|+||++|+.+|.++|+ +|++| +|. .+ +.+|| |+|||++.+.+++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~----~V~~~-~~~------------------~~-~~~aD--ilavP~~ai~~vl~ 59 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGH----YVTVL-HAP------------------ED-IRDFE--LVVIDAHGVEGYVE 59 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTC----EEEEC-SSG------------------GG-GGGCS--EEEECSSCHHHHHH
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCC----EEEEe-cCH------------------HH-hccCC--EEEEcHHHHHHHHH
Confidence 4799999999999999999999999 99999 872 12 56789 99999999999999
Q ss_pred HhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCe-EEc
Q 024016 90 QIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKI-WRA 167 (274)
Q Consensus 90 ~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~-~~~ 167 (274)
++.+.++++++|+++++.++.+.++...+ +..++..||.. .....+... +++..+.++++++.+|.. +++
T Consensus 60 ~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~-----g~~~~i~a~---d~~a~~~l~~L~~~lG~~vv~~ 131 (232)
T 3dfu_A 60 KLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIG-----QDRWVASAL---DELGETIVGLLVGELGGSIVEI 131 (232)
T ss_dssp HHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEE-----TTEEEEEES---SHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCC-----CCceeeeCC---CHHHHHHHHHHHHHhCCEEEEe
Confidence 99998999999999887777666655433 45677777753 123444443 678899999999999965 889
Q ss_pred CccchhhHHHhhcchHHHHHH
Q 024016 168 DEKLFDAITGLSGSGPAYIFL 188 (274)
Q Consensus 168 ~e~~~~~~~a~~~~~~~~~~~ 188 (274)
++++++.+.+...+.|+++..
T Consensus 132 ~~~~hd~~~AAvsh~nhLv~L 152 (232)
T 3dfu_A 132 ADDKRAQLAAALTYAGFLSTL 152 (232)
T ss_dssp CGGGHHHHHHHHHHHHHHHHH
T ss_pred CHHHHhHHHHHHHHHHHHHHH
Confidence 999998887766665655443
No 66
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.78 E-value=1.4e-17 Score=158.08 Aligned_cols=188 Identities=14% Similarity=0.038 Sum_probs=138.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHH-----------HHcC-------------ceecc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAF-----------ESIG-------------VKVLS 63 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l-----------~~~g-------------~~~~~ 63 (274)
+..+||+|||+|.||++||..|.++|| +|++| |+++++++.. .+.| ++.++
T Consensus 312 ~~i~kV~VIGaG~MG~~iA~~la~aG~----~V~l~-D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 386 (715)
T 1wdk_A 312 KDVKQAAVLGAGIMGGGIAYQSASKGT----PILMK-DINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTL 386 (715)
T ss_dssp CCCSSEEEECCHHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEES
T ss_pred ccCCEEEEECCChhhHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEEC
Confidence 345789999999999999999999999 99999 9999887653 2233 34556
Q ss_pred CchhhccCCCEEEEeeCccc--HHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEE
Q 024016 64 DNNAVVEYSDVVVFSVKPQV--VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVM 140 (274)
Q Consensus 64 ~~~~~~~~aDiIil~v~~~~--~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i 140 (274)
++ +.+++||+||+|||.+. .++++.++.+.++++++++|.++++++..+.+.+. ..+++..|+..|..... ...+
T Consensus 387 d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~-lvev 464 (715)
T 1wdk_A 387 SY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP-LVEV 464 (715)
T ss_dssp SS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCC-EEEE
T ss_pred CH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCc-eEEE
Confidence 66 67889999999998654 56788888888999999999889999988887765 24688888877765443 3345
Q ss_pred ecCCCCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHH-HHHHHHHHHHHHHcCCCHHHHHHHH
Q 024016 141 SLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYI-FLAIEALADGGVAAGLPRELALGLA 211 (274)
Q Consensus 141 ~~~~~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~-~~~~~~l~e~~~~~Gl~~~~~~~~~ 211 (274)
+.++..+++.++.+.++++.+|+. +++++. ..- . .+.++ ..+.+++ . ..+.|+++++..+++
T Consensus 465 v~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf----i--~Nril~~~~~Ea~-~-l~~~G~~~~~id~~~ 528 (715)
T 1wdk_A 465 IRGEKSSDLAVATTVAYAKKMGKNPIVVNDC-PGF----L--VNRVLFPYFGGFA-K-LVSAGVDFVRIDKVM 528 (715)
T ss_dssp EECSSCCHHHHHHHHHHHHHTTCEEEEEESC-TTT----T--HHHHHHHHHHHHH-H-HHHTTCCHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhCCEeEEEcCC-CCh----h--hhHHHHHHHHHHH-H-HHHCCCCHHHHHHHH
Confidence 567777899999999999999975 666542 110 0 12222 2223332 1 234589998877776
No 67
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.78 E-value=2.1e-17 Score=143.17 Aligned_cols=238 Identities=15% Similarity=0.204 Sum_probs=152.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce-------------eccCchhhccCCCEEE
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVK-------------VLSDNNAVVEYSDVVV 76 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~-------------~~~~~~~~~~~aDiIi 76 (274)
++||+|||+|+||++++..|.++|+ +|++| +++++.+.+.+.|.. ..++. +.+.++|+||
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~----~V~l~--~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vi 91 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGH----EVILI--ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVL 91 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTC----EEEEE--CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCC----eEEEE--EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEE
Confidence 4799999999999999999999999 99999 567788888775543 23344 3468899999
Q ss_pred EeeCcccHHHHHHHhccccCCCCEEEEecCCCCH-HHHHHhhCCCceEE---------EcCCcHHhhcCCceEEecCCCC
Q 024016 77 FSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL-KDLQEWTGHSRFIR---------VMPNTPSAVGEAATVMSLGGTA 146 (274)
Q Consensus 77 l~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~-~~l~~~~~~~~~~~---------~~p~~~~~~~~g~~~i~~~~~~ 146 (274)
+|||+++++++++++.+.++++++||++++|+.. +.+.+.++ .+++. ..|+...+.+.|.+.+ +.
T Consensus 92 lavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~-~~vl~g~~~~~a~~~gP~~~~~~~~g~~~i--g~-- 166 (318)
T 3hwr_A 92 FCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE-QEVAAAVVYVATEMAGPGHVRHHGRGELVI--EP-- 166 (318)
T ss_dssp ECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC-SEEEEEEEEEEEEEEETTEEEEEEEEEEEE--CC--
T ss_pred EEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC-CcEEEEEEEEeEEEcCCeEEEEcCCceEEE--cC--
Confidence 9999999999999999999999999999999997 67777775 33332 2355554555554433 32
Q ss_pred CHHHHHHHHHHhhhcCCeEEcCcc-------------chhhHHHhhcchHHHH------HHHHH-HHHH---HHHHcCCC
Q 024016 147 TEEDGELIGKLFGSVGKIWRADEK-------------LFDAITGLSGSGPAYI------FLAIE-ALAD---GGVAAGLP 203 (274)
Q Consensus 147 ~~~~~~~v~~ll~~~g~~~~~~e~-------------~~~~~~a~~~~~~~~~------~~~~~-~l~e---~~~~~Gl~ 203 (274)
.+..+.+.++|+..|..++.+++ .++.++++.++...-+ ..++. .+.| .+.+.|++
T Consensus 167 -~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~G~~ 245 (318)
T 3hwr_A 167 -TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVK 245 (318)
T ss_dssp -CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred -CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHHcCCC
Confidence 34557788999988866555554 2455667666544321 11222 2222 34577876
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhcCCChHHHHHhcCCCC-----chHHHHHHHHHhCCHHHHHHHHHHHHH
Q 024016 204 REL-ALGLASQTVLGAASMVTKSGKHPGQLKDDVASPG-----GTTIAGIHELEKSGFRGILMNAVVAAA 267 (274)
Q Consensus 204 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~t~~~l~~l~~~~~~~~~~~a~~~~~ 267 (274)
.+. ..+.+...+..+ ....+.++.|.. ..+ ..+-.-++.-++.|+.....+.+.+.+
T Consensus 246 l~~~~~~~~~~~~~~~------~~~~sSM~qD~~-~gr~tEid~i~G~vv~~a~~~gv~tP~~~~l~~ll 308 (318)
T 3hwr_A 246 LPDDVALAIRRIAETM------PRQSSSTAQDLA-RGKRSEIDHLNGLIVRRGDALGIPVPANRVLHALV 308 (318)
T ss_dssp CCTTHHHHHHHHHHHS------TTCCCHHHHHHH-TTCCCSGGGTHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhc------CCCCcHHHHHHH-cCChhHHHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 432 222222221111 123455655543 222 223344566677777766666555444
No 68
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.78 E-value=2.4e-17 Score=142.84 Aligned_cols=164 Identities=15% Similarity=0.202 Sum_probs=118.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce---------------eccCchhhccCCCEE
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVK---------------VLSDNNAVVEYSDVV 75 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~---------------~~~~~~~~~~~aDiI 75 (274)
|||+|||+|.||+.++..|.++|+ +|++| +|++ .+.+.+.|+. +++++.++.+++|+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~----~V~~~-~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlV 75 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH----CVSVV-SRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCT 75 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC----EEEEE-CSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC----eEEEE-eCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEE
Confidence 799999999999999999999999 99999 9986 2666655532 234555555589999
Q ss_pred EEeeCcccHHHHHHHhccccCCCCEEEEecCCCC-HHHHHHhhCCCceEEEcCCc------HHhh---cCCceEEecCCC
Q 024016 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK-LKDLQEWTGHSRFIRVMPNT------PSAV---GEAATVMSLGGT 145 (274)
Q Consensus 76 il~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~-~~~l~~~~~~~~~~~~~p~~------~~~~---~~g~~~i~~~~~ 145 (274)
|+|||+++++++++++.+.++++++||++.+|+. .+.+++.++..+++...... |..+ +.|.+.+..-+.
T Consensus 76 ilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~~ 155 (320)
T 3i83_A 76 LLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPG 155 (320)
T ss_dssp EECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTSCEEEEEEEEEEEEEETTEEEEEEEEEEEEEESSS
T ss_pred EEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCCcEEEEEEEeceEEcCCCEEEECCCCEEEEecCCC
Confidence 9999999999999999999999999999999997 47888888755555443211 2222 222223322222
Q ss_pred CCHHHHHHHHHHhhhcCCeEEcCccc-------------hhhHHHhhcc
Q 024016 146 ATEEDGELIGKLFGSVGKIWRADEKL-------------FDAITGLSGS 181 (274)
Q Consensus 146 ~~~~~~~~v~~ll~~~g~~~~~~e~~-------------~~~~~a~~~~ 181 (274)
.+.+..+.+.++|+..|..++..++. ++.++++.++
T Consensus 156 ~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~ 204 (320)
T 3i83_A 156 GVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGG 204 (320)
T ss_dssp CCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccHHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCC
Confidence 34567888999999988665555441 3456777664
No 69
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.76 E-value=1.1e-16 Score=145.23 Aligned_cols=189 Identities=18% Similarity=0.169 Sum_probs=135.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----------cC-----------ceeccCc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----------IG-----------VKVLSDN 65 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-----------~g-----------~~~~~~~ 65 (274)
+..+||+|||+|.||..||..|.++|+ +|++| |+++++++.+.+ .| ..++++.
T Consensus 35 ~~~~kV~VIGaG~MG~~iA~~la~~G~----~V~l~-D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 109 (463)
T 1zcj_A 35 QPVSSVGVLGLGTMGRGIAISFARVGI----SVVAV-ESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST 109 (463)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH
Confidence 456799999999999999999999999 99999 999987765432 11 2344455
Q ss_pred hhhccCCCEEEEeeCccc--HHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEec
Q 024016 66 NAVVEYSDVVVFSVKPQV--VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSL 142 (274)
Q Consensus 66 ~~~~~~aDiIil~v~~~~--~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~~ 142 (274)
+.+++||+||+|||.+. ..+++.++.+.++++++|++.++++++..+++.+. ..+++..|+..|..... ...++.
T Consensus 110 -~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~~~~~~~~~ig~hf~~P~~~~~-lvevv~ 187 (463)
T 1zcj_A 110 -KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMR-LLEVIP 187 (463)
T ss_dssp -GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCC-EEEEEE
T ss_pred -HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHHHhcCCcceEEeecCCCcccce-eEEEeC
Confidence 56889999999998653 46788888888899999998888888888877665 34677777766654332 344666
Q ss_pred CCCCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHH
Q 024016 143 GGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIF-LAIEALADGGVAAGLPRELALGLAS 212 (274)
Q Consensus 143 ~~~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~-~~~~~l~e~~~~~Gl~~~~~~~~~~ 212 (274)
++..+++.++.++++++.+|+. +++++.. .. ..+.++. .+.+++ . ..+.|+++++..+++.
T Consensus 188 g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~-gf------i~Nrll~~~~~ea~-~-l~~~G~~~~~id~~~~ 250 (463)
T 1zcj_A 188 SRYSSPTTIATVMSLSKKIGKIGVVVGNCY-GF------VGNRMLAPYYNQGF-F-LLEEGSKPEDVDGVLE 250 (463)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEBCCST-TT------THHHHHHHHHHHHH-H-HHHTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCEEEEECCCc-cH------HHHHHHHHHHHHHH-H-HHHcCCCHHHHHHHHH
Confidence 7778999999999999999975 6766421 10 0111111 122222 1 2345888887777664
No 70
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.76 E-value=6.7e-18 Score=138.18 Aligned_cols=151 Identities=18% Similarity=0.235 Sum_probs=113.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
++|||+|||+|+||.+++.+|.+.|+ +|++| +|++++.+.+.+.|+... +..++++++|+||+|+|++.+++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~----~V~~~-~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~~~~~~v~ 100 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGF----KVVVG-SRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFREHYSSLC 100 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCGGGSGGGG
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCChHHHHHHH
Confidence 45799999999999999999999998 99999 999998888877777765 6677888999999999998877777
Q ss_pred HHhccccCCCCEEEEecCCCCHHHHH----------HhhCCCceEEEcCCcHHh-----hcCCce-EEecCCCCCHHHHH
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKLKDLQ----------EWTGHSRFIRVMPNTPSA-----VGEAAT-VMSLGGTATEEDGE 152 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~~~l~----------~~~~~~~~~~~~p~~~~~-----~~~g~~-~i~~~~~~~~~~~~ 152 (274)
. +.+.+ +++++|+++++.+.+.++ +.+++.++++.+...... ...+.+ .+..+ .+++..+
T Consensus 101 ~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g--~~~~~~~ 176 (215)
T 2vns_A 101 S-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNVISAWTLQAGPRDGNRQVPICG--DQPEAKR 176 (215)
T ss_dssp G-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTTBCHHHHHTCSCSSCCEEEEEE--SCHHHHH
T ss_pred H-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEeccccccHhHhcccccCCceeEEEec--CCHHHHH
Confidence 5 65555 789999999998765443 556655777765221111 111222 23333 2688999
Q ss_pred HHHHHhhhcCCe-EEcCc
Q 024016 153 LIGKLFGSVGKI-WRADE 169 (274)
Q Consensus 153 ~v~~ll~~~g~~-~~~~e 169 (274)
.++++|+.+|.. +++++
T Consensus 177 ~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 177 AVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp HHHHHHHHTTCEEEECCS
T ss_pred HHHHHHHHcCCceEeecc
Confidence 999999999975 77765
No 71
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.75 E-value=1.2e-16 Score=151.95 Aligned_cols=187 Identities=15% Similarity=0.061 Sum_probs=134.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----------cC-------------ceeccC
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----------IG-------------VKVLSD 64 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-----------~g-------------~~~~~~ 64 (274)
.++||+|||+|.||+.||..|.++|| +|++| |+++++++...+ .| ++..++
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~----~V~l~-D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d 385 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNY----PVILK-EVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLD 385 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTC----CEEEE-CSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESS
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCC
Confidence 45789999999999999999999999 99999 999988765421 22 344556
Q ss_pred chhhccCCCEEEEeeCccc--HHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEe
Q 024016 65 NNAVVEYSDVVVFSVKPQV--VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMS 141 (274)
Q Consensus 65 ~~~~~~~aDiIil~v~~~~--~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~ 141 (274)
. +.+++||+||+|||.+. .++++.++.+.+++++++++.++++++..+.+.+. ..+++..|+..|..... ...++
T Consensus 386 ~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~-lvevv 463 (725)
T 2wtb_A 386 Y-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMP-LLEIV 463 (725)
T ss_dssp S-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCC-EEEEE
T ss_pred H-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCc-eEEEE
Confidence 5 57889999999998664 56788888888899999888889999988877664 24677777655654322 34456
Q ss_pred cCCCCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHH-HHHHHHHHHHHHHcCCCHHHHHHHH
Q 024016 142 LGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYI-FLAIEALADGGVAAGLPRELALGLA 211 (274)
Q Consensus 142 ~~~~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~-~~~~~~l~e~~~~~Gl~~~~~~~~~ 211 (274)
.++..+++.++.+.++++.+|+. +++++. ... . .+.++ ..+.+++ . ..+.|+++++..+++
T Consensus 464 ~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf----i--~Nril~~~~~Ea~-~-l~~~G~~~e~id~~~ 526 (725)
T 2wtb_A 464 RTNHTSAQVIVDLLDVGKKIKKTPVVVGNC-TGF----A--VNRMFFPYTQAAM-F-LVECGADPYLIDRAI 526 (725)
T ss_dssp ECSSCCHHHHHHHHHHHHHTTCEEEEEESS-TTT----T--HHHHHHHHHHHHH-H-HHHTTCCHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhCCEEEEECCC-ccH----H--HHHHHHHHHHHHH-H-HHHCCCCHHHHHHHH
Confidence 67777999999999999999975 666542 111 0 12221 2223332 1 234599998887777
No 72
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.75 E-value=1.5e-16 Score=141.90 Aligned_cols=195 Identities=11% Similarity=0.139 Sum_probs=129.4
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc------------------CceeccCc
Q 024016 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI------------------GVKVLSDN 65 (274)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~------------------g~~~~~~~ 65 (274)
+++.+++|||+|||+|.||.++|..|.+ |+ +|++| ||++++++.+.+. +++.++++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~----~V~~~-D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~ 103 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NH----EVVAL-DIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDK 103 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TS----EEEEE-CSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCH
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CC----eEEEE-ecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCH
Confidence 4566677899999999999999999987 99 99999 9999998877651 45667777
Q ss_pred hhhccCCCEEEEeeCcc-----------cHHHHHHHhccccCCCCEEEEecCCCCH---HHHHHhhCCCceEEEcCCc--
Q 024016 66 NAVVEYSDVVVFSVKPQ-----------VVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTGHSRFIRVMPNT-- 129 (274)
Q Consensus 66 ~~~~~~aDiIil~v~~~-----------~~~~v~~~i~~~l~~~~~vis~~~g~~~---~~l~~~~~~~~~~~~~p~~-- 129 (274)
.+++++||+||+|||.. .++++++++.+ ++++++||.. +++++ +.+.+.+... .+.+.|..
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~-STv~pgtt~~l~~~l~~~-~v~~sPe~~~ 180 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIK-STIPVGFTRDIKERLGID-NVIFSPEFLR 180 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEEC-SCCCTTHHHHHHHHHTCC-CEEECCCCCC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEe-CCCChHHHHHHHHHHhhc-cEeecCccCC
Confidence 88899999999999864 47888888988 8999998864 45554 4555555532 23334431
Q ss_pred HHhhcCC----ceEEecCCCCCHHHHHHHHHHhhh--cCC--eEEcCccchhhHHHhhcchHHHHHHHHHHHHHH---HH
Q 024016 130 PSAVGEA----ATVMSLGGTATEEDGELIGKLFGS--VGK--IWRADEKLFDAITGLSGSGPAYIFLAIEALADG---GV 198 (274)
Q Consensus 130 ~~~~~~g----~~~i~~~~~~~~~~~~~v~~ll~~--~g~--~~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~~ 198 (274)
|.....+ ..++..+ +++..+.+.++|.. ++. .++.+...-..++.+. .+.|.+..+..+.|. +.
T Consensus 181 ~G~A~~~~l~p~rIvvG~---~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~--~N~~~a~~Ia~~nEl~~lae 255 (432)
T 3pid_A 181 EGRALYDNLHPSRIVIGE---RSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLF--ANTYLALRVAYFNELDSYAE 255 (432)
T ss_dssp TTSHHHHHHSCSCEEESS---CSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhcccCCceEEecC---CHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1344433 46778889999986 542 3444433233334333 355555544444444 56
Q ss_pred HcCCCHHHHHHHHH
Q 024016 199 AAGLPRELALGLAS 212 (274)
Q Consensus 199 ~~Gl~~~~~~~~~~ 212 (274)
+.|+|.++..+.+.
T Consensus 256 ~~GiD~~~v~~~~~ 269 (432)
T 3pid_A 256 SQGLNSKQIIEGVC 269 (432)
T ss_dssp HTTCCHHHHHHHHH
T ss_pred HcCCCHHHHHHHHc
Confidence 89999998877664
No 73
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.74 E-value=5.3e-17 Score=146.55 Aligned_cols=189 Identities=16% Similarity=0.139 Sum_probs=130.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-------------------c-CceeccCchhhcc
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-------------------I-GVKVLSDNNAVVE 70 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-------------------~-g~~~~~~~~~~~~ 70 (274)
|||+|||+|.||.++|..|.++|+ +|++| ||++++++.+.+ . ++..++++.++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~----~V~~~-D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~ 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA----NVRCI-DTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVP 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGG
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC----EEEEE-ECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHh
Confidence 799999999999999999999999 99999 999999888765 1 2456677788899
Q ss_pred CCCEEEEeeCcc----------cHHHHHHHhccccCCCCEEEEecCCCCH---HHHHHhhC----C----Cc-eEEEcCC
Q 024016 71 YSDVVVFSVKPQ----------VVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTG----H----SR-FIRVMPN 128 (274)
Q Consensus 71 ~aDiIil~v~~~----------~~~~v~~~i~~~l~~~~~vis~~~g~~~---~~l~~~~~----~----~~-~~~~~p~ 128 (274)
+||+||+|||.. .++++++++.++++++++||+.+ ++++ +.+.+.+. . .. .+...|.
T Consensus 78 ~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe 156 (450)
T 3gg2_A 78 EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIASNPE 156 (450)
T ss_dssp GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCC
T ss_pred cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEEechh
Confidence 999999999865 79999999999999999888765 4543 23333221 1 11 1223343
Q ss_pred cHHhhcCCc---------eEEecCCCCCHHHHHHHHHHhhhcCC---eEEcCccchhhHHHhhcchHHHHHHHHHHHHHH
Q 024016 129 TPSAVGEAA---------TVMSLGGTATEEDGELIGKLFGSVGK---IWRADEKLFDAITGLSGSGPAYIFLAIEALADG 196 (274)
Q Consensus 129 ~~~~~~~g~---------~~i~~~~~~~~~~~~~v~~ll~~~g~---~~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~ 196 (274)
. ...|. .++..+. +++..+.++++++.+++ .++.++..-..++.+. .+.+.+..+..+.|.
T Consensus 157 ~---a~eG~~~~~~~~p~~ivvG~~--~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~--~N~~~a~~ia~~nE~ 229 (450)
T 3gg2_A 157 F---LKEGNAIDDFMKPDRVVVGVD--SDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYA--ANAMLATRISFMNDV 229 (450)
T ss_dssp C---CCTTSHHHHHHSCSCEEEEES--SHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred h---hcccchhhhccCCCEEEEEcC--CHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 2 22222 2343332 57889999999999885 3544432222333333 245555545555554
Q ss_pred ---HHHcCCCHHHHHHHHH
Q 024016 197 ---GVAAGLPRELALGLAS 212 (274)
Q Consensus 197 ---~~~~Gl~~~~~~~~~~ 212 (274)
+.+.|+|.++..+++.
T Consensus 230 ~~l~~~~Gid~~~v~~~~~ 248 (450)
T 3gg2_A 230 ANLCERVGADVSMVRLGIG 248 (450)
T ss_dssp HHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHc
Confidence 5689999998877765
No 74
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.74 E-value=3.9e-17 Score=133.06 Aligned_cols=135 Identities=15% Similarity=0.244 Sum_probs=104.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
..+||+|||+|+||++++..|.++|+ +|++| +|+++ .++++|+||+|+|++.+++++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~----~V~~~-~~~~~------------------~~~~aD~vi~av~~~~~~~v~ 74 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH----EVTYY-GSKDQ------------------ATTLGEIVIMAVPYPALAALA 74 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CTTCC------------------CSSCCSEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-cCCHH------------------HhccCCEEEEcCCcHHHHHHH
Confidence 45799999999999999999999999 99999 99865 457899999999999999999
Q ss_pred HHhccccCCCCEEEEecCCCC---------------HHHHHHhhCCCceEEE-----cCCcHHhhcCC--ceE-EecCCC
Q 024016 89 MQIRPLLSRKKLLVSVAAGVK---------------LKDLQEWTGHSRFIRV-----MPNTPSAVGEA--ATV-MSLGGT 145 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~---------------~~~l~~~~~~~~~~~~-----~p~~~~~~~~g--~~~-i~~~~~ 145 (274)
.++.+.++ ++++|++++|++ .+.+++.+++.++++. .|+.+.....+ .+. ++.+
T Consensus 75 ~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g-- 151 (209)
T 2raf_A 75 KQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPDSQVLKAFNTTFAATLQSGQVNGKEPTTVLVAG-- 151 (209)
T ss_dssp HHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTTSEEEECSTTSCHHHHHHSEETTTEECEEEEEE--
T ss_pred HHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCCCCcEEEeeecccHhhccccccCCCCCceeEEcC--
Confidence 99988887 899999988776 4677777776677773 34333332233 223 3333
Q ss_pred CCHHHHHHHHHHhhhcCC-eEEcCc
Q 024016 146 ATEEDGELIGKLFGSVGK-IWRADE 169 (274)
Q Consensus 146 ~~~~~~~~v~~ll~~~g~-~~~~~e 169 (274)
.+++..+.++++|+.+|. .+++++
T Consensus 152 ~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 152 NDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp SCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred CCHHHHHHHHHHHHHcCCceEeCCC
Confidence 257889999999999995 466654
No 75
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.73 E-value=9.3e-17 Score=144.36 Aligned_cols=190 Identities=13% Similarity=0.139 Sum_probs=130.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc--------------------CceeccCchhhc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI--------------------GVKVLSDNNAVV 69 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~--------------------g~~~~~~~~~~~ 69 (274)
..+|+|||+|.||.+||..|.++|| +|++| ||++++++.+.+. +++.++++.+++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~----~V~~~-D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~ 82 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGH----EVVCV-DKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGV 82 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHH
Confidence 4689999999999999999999999 99999 9999999887651 245667888889
Q ss_pred cCCCEEEEeeCcc-----------cHHHHHHHhccccCCCCEEEEecCCCCHH---HHHHhh----CCC-ceEEEcCCcH
Q 024016 70 EYSDVVVFSVKPQ-----------VVKDVAMQIRPLLSRKKLLVSVAAGVKLK---DLQEWT----GHS-RFIRVMPNTP 130 (274)
Q Consensus 70 ~~aDiIil~v~~~-----------~~~~v~~~i~~~l~~~~~vis~~~g~~~~---~l~~~~----~~~-~~~~~~p~~~ 130 (274)
++||+||+|||.. .++++++++.++++++++||+.+ ++++. .+.+.+ ++. -.+...|..
T Consensus 83 ~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~- 160 (446)
T 4a7p_A 83 KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEVAPNSGAKVVSNPEF- 160 (446)
T ss_dssp TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHHSTTSCCEEEECCCC-
T ss_pred hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHhCCCCCceEEeCccc-
Confidence 9999999998632 48999999999999999999764 56543 333322 111 122233432
Q ss_pred HhhcCCc---------eEEecCCCCCHHHHHHHHHHhhhcCC----eEEcCccchhhHHHhhcchHHHHHHHHHHHHHH-
Q 024016 131 SAVGEAA---------TVMSLGGTATEEDGELIGKLFGSVGK----IWRADEKLFDAITGLSGSGPAYIFLAIEALADG- 196 (274)
Q Consensus 131 ~~~~~g~---------~~i~~~~~~~~~~~~~v~~ll~~~g~----~~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~- 196 (274)
..+|. .++..+ .+++..+.++++++.+++ .++.++-.-..++.+. .+.|.+..+..+.|.
T Consensus 161 --a~eG~a~~d~~~p~~ivvG~--~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~--~N~~~a~~ia~~nE~~ 234 (446)
T 4a7p_A 161 --LREGAAIEDFKRPDRVVVGT--EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYA--ANAFLAVKITFINEIA 234 (446)
T ss_dssp --CCTTSHHHHHHSCSCEEEEC--SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred --ccccchhhhccCCCEEEEeC--CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 22222 234433 257889999999999885 2444432222333332 245555555555554
Q ss_pred --HHHcCCCHHHHHHHHH
Q 024016 197 --GVAAGLPRELALGLAS 212 (274)
Q Consensus 197 --~~~~Gl~~~~~~~~~~ 212 (274)
+.+.|+|.++..+.+.
T Consensus 235 ~l~~~~GiD~~~v~~~~~ 252 (446)
T 4a7p_A 235 DLCEQVGADVQEVSRGIG 252 (446)
T ss_dssp HHHHHTTCCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHh
Confidence 5699999998887765
No 76
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.71 E-value=4.4e-16 Score=134.13 Aligned_cols=164 Identities=16% Similarity=0.178 Sum_probs=113.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccC----------chhhccCCCEEEEee
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSD----------NNAVVEYSDVVVFSV 79 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~----------~~~~~~~aDiIil~v 79 (274)
+|||+|||+|+||+.++..|. +|+ +|++| +|++++.+.+.+.|+.+..+ ..+....+|+||+||
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~----~V~~~-~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilav 75 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH----DVTVV-TRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTV 75 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS----EEEEE-CSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC----ceEEE-ECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEe
Confidence 379999999999999999999 998 99999 99998888888777654321 124567899999999
Q ss_pred CcccHHHHHHHhccccCCCCEEEEecCCCCHH-HHHHhhCCCceEEEcCCc------H---HhhcCCceEEecCCCCCHH
Q 024016 80 KPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLK-DLQEWTGHSRFIRVMPNT------P---SAVGEAATVMSLGGTATEE 149 (274)
Q Consensus 80 ~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~~-~l~~~~~~~~~~~~~p~~------~---~~~~~g~~~i~~~~~~~~~ 149 (274)
|+++++++++.+.+. .+++ ||++.+|+..+ .++++++..+++..+... | .+.+.|.+.+..-++ ..+
T Consensus 76 K~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~g~~~iG~~~~-~~~ 152 (307)
T 3ego_A 76 KQHQLQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDD-AEP 152 (307)
T ss_dssp CGGGHHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCCSCEEEEEEECCEEEECSSSEEEEEECCCEEEEECTT-CCG
T ss_pred CHHHHHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCCCCcEEEEEEeeceEECCCCEEEEeeeeeEEEEeCCC-CcH
Confidence 999999999999875 5666 99999999975 777777755555443221 2 222334333332111 133
Q ss_pred HHHHHHHHhhhcCCeEEcCcc-------------chhhHHHhhcch
Q 024016 150 DGELIGKLFGSVGKIWRADEK-------------LFDAITGLSGSG 182 (274)
Q Consensus 150 ~~~~v~~ll~~~g~~~~~~e~-------------~~~~~~a~~~~~ 182 (274)
..+.+.+.|+..|..+..+++ .++.++++.++.
T Consensus 153 ~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~ 198 (307)
T 3ego_A 153 DRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVK 198 (307)
T ss_dssp GGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhhhhhHHHHHhcCC
Confidence 344455555555555555543 246677776653
No 77
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.69 E-value=5.2e-16 Score=141.02 Aligned_cols=193 Identities=15% Similarity=0.165 Sum_probs=125.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHH-------------------cCceeccCchh
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFES-------------------IGVKVLSDNNA 67 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~-------------------~g~~~~~~~~~ 67 (274)
++|||+|||+|.||.+++..|.++ |+ +|++| ||++++.+.+.+ .++..++++.+
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~----~V~~~-d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e 78 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEI----RVTVV-DVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDD 78 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTS----EEEEE-CSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHH
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCC----EEEEE-ECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHH
Confidence 357999999999999999999999 78 99999 999998887532 24566677777
Q ss_pred hccCCCEEEEeeCc-cc--------------HHHHHHHhccccCCCCEEEEecCCCC---HHHHHHhhCC--Cc----eE
Q 024016 68 VVEYSDVVVFSVKP-QV--------------VKDVAMQIRPLLSRKKLLVSVAAGVK---LKDLQEWTGH--SR----FI 123 (274)
Q Consensus 68 ~~~~aDiIil~v~~-~~--------------~~~v~~~i~~~l~~~~~vis~~~g~~---~~~l~~~~~~--~~----~~ 123 (274)
++++||+||+|||. .. +.++++++.+.++++++||+.++ ++ .+.+.+.++. .. .+
T Consensus 79 ~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ST-v~~g~~~~l~~~l~~~~~~~~d~~V 157 (467)
T 2q3e_A 79 AIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKST-VPVRAAESIRRIFDANTKPNLNLQV 157 (467)
T ss_dssp HHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSC-CCTTHHHHHHHHHHHTCCTTCEEEE
T ss_pred HHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCc-CCchHHHHHHHHHHHhCCCCCCeEE
Confidence 88899999999973 32 56778888888889988886543 33 2345444431 11 11
Q ss_pred EEcCCcHHhhcCCce---------EEecCCC--CCHHHHHHHHHHhhhc-CC-eEEcCccchhhHHHhhcchHHHHHHHH
Q 024016 124 RVMPNTPSAVGEAAT---------VMSLGGT--ATEEDGELIGKLFGSV-GK-IWRADEKLFDAITGLSGSGPAYIFLAI 190 (274)
Q Consensus 124 ~~~p~~~~~~~~g~~---------~i~~~~~--~~~~~~~~v~~ll~~~-g~-~~~~~e~~~~~~~a~~~~~~~~~~~~~ 190 (274)
...| .....|.. ++..++. .+++..+.++++++.+ |. .++.++........+. .+.+....+
T Consensus 158 ~~~P---e~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~--~N~~~a~~i 232 (467)
T 2q3e_A 158 LSNP---EFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLA--ANAFLAQRI 232 (467)
T ss_dssp EECC---CCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHH--HHHHHHHHH
T ss_pred EeCH---HHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHH--HHHHHHHHH
Confidence 2223 22233332 3333321 2577889999999998 64 4555432222233332 233433333
Q ss_pred HHHHH---HHHHcCCCHHHHHHHHH
Q 024016 191 EALAD---GGVAAGLPRELALGLAS 212 (274)
Q Consensus 191 ~~l~e---~~~~~Gl~~~~~~~~~~ 212 (274)
..+.| .+.+.|++.++..+++.
T Consensus 233 a~~nE~~~l~~~~Gid~~~v~~~~~ 257 (467)
T 2q3e_A 233 SSINSISALCEATGADVEEVATAIG 257 (467)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHc
Confidence 33333 35689999998877654
No 78
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.68 E-value=4.6e-16 Score=140.25 Aligned_cols=189 Identities=12% Similarity=0.131 Sum_probs=125.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-------------------cC-ceeccCchhhcc
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-------------------IG-VKVLSDNNAVVE 70 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-------------------~g-~~~~~~~~~~~~ 70 (274)
|||+|||+|.||.+++..|.++|+ +|++| +|++++.+.+.+ .| +..++++.++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~----~V~~~-d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~ 75 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGH----EVIGV-DVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL 75 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc
Confidence 589999999999999999999999 99999 999999888765 23 555667777888
Q ss_pred CCCEEEEeeCccc----------HHHHHHHhccccCC---CCEEEEecCCCC----HHHHHHhhC---CCc-----eEEE
Q 024016 71 YSDVVVFSVKPQV----------VKDVAMQIRPLLSR---KKLLVSVAAGVK----LKDLQEWTG---HSR-----FIRV 125 (274)
Q Consensus 71 ~aDiIil~v~~~~----------~~~v~~~i~~~l~~---~~~vis~~~g~~----~~~l~~~~~---~~~-----~~~~ 125 (274)
+||+||+|||... ++++++++.+.+++ +++||+.+ ++. .+.+.+.++ +.. .+..
T Consensus 76 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S-tv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~ 154 (436)
T 1mv8_A 76 DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS-TVLPGTVNNVVIPLIEDCSGKKAGVDFGVGT 154 (436)
T ss_dssp TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS-CCCTTHHHHTHHHHHHHHHSCCBTTTBEEEE
T ss_pred cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC-CcCCCchHHHHHHHHHHhcCcccCCcEEEEE
Confidence 9999999998544 89999999888888 88888653 333 233444332 111 1223
Q ss_pred cCCcHHhhcCCc---------eEEecCCCCCHHHHHHHHHHhhhcCCeEEcCccchhhHHHhhcchHHHHHH---HHHHH
Q 024016 126 MPNTPSAVGEAA---------TVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFL---AIEAL 193 (274)
Q Consensus 126 ~p~~~~~~~~g~---------~~i~~~~~~~~~~~~~v~~ll~~~g~~~~~~e~~~~~~~a~~~~~~~~~~~---~~~~l 193 (274)
.|. ....|. .++..+ .+++..+.++++++.+|..++.++-.......+. .+.|... +++.+
T Consensus 155 ~Pe---~~~~G~~~~~~~~~~~iv~G~--~~~~~~~~~~~l~~~~~~~v~~~~~~~ae~~Kl~--~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 155 NPE---FLRESTAIKDYDFPPMTVIGE--LDKQTGDLLEEIYRELDAPIIRKTVEVAEMIKYT--CNVWHAAKVTFANEI 227 (436)
T ss_dssp CCC---CCCTTSHHHHHHSCSCEEEEE--SSHHHHHHHHHHHTTSSSCEEEEEHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred Ccc---cccccccchhccCCCEEEEEc--CCHHHHHHHHHHHhccCCCEEcCCHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 332 112222 233322 2578889999999999965433332222233332 2444433 33334
Q ss_pred HHHHHHcCCCHHHHHHHHH
Q 024016 194 ADGGVAAGLPRELALGLAS 212 (274)
Q Consensus 194 ~e~~~~~Gl~~~~~~~~~~ 212 (274)
...+.+.|++.++..+.+.
T Consensus 228 ~~l~~~~Gid~~~v~~~~~ 246 (436)
T 1mv8_A 228 GNIAKAVGVDGREVMDVIC 246 (436)
T ss_dssp HHHHHHTTSCHHHHHHHHT
T ss_pred HHHHHHhCCCHHHHHHHhc
Confidence 4446789999887666554
No 79
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.67 E-value=1.1e-15 Score=139.12 Aligned_cols=197 Identities=13% Similarity=0.125 Sum_probs=125.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHc-------------------CceeccCch
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESI-------------------GVKVLSDNN 66 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~~-------------------g~~~~~~~~ 66 (274)
+++|||+|||+|.||.++|..|.++ |+ +|++| ||++++++.+.+. ++..++++.
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~----~V~~~-D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~ 81 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHI----TVTVV-DMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIP 81 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTS----EEEEE-CSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCC----EEEEE-ECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHH
Confidence 3467999999999999999999998 68 99999 9999999887641 244555666
Q ss_pred hhccCCCEEEEeeCcc---------------cHHHHHHHhccccCCCCEEEEecCCCCH---HHHHHhhCC-Cc------
Q 024016 67 AVVEYSDVVVFSVKPQ---------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTGH-SR------ 121 (274)
Q Consensus 67 ~~~~~aDiIil~v~~~---------------~~~~v~~~i~~~l~~~~~vis~~~g~~~---~~l~~~~~~-~~------ 121 (274)
+++++||+||+|||.. .+.++++++.++++++++||..+ ++++ +.+.+.+.. ..
T Consensus 82 ~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~gt~~~l~~~l~~~~~~~~~~d 160 (481)
T 2o3j_A 82 KAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS-TVPVKAAESIGCILREAQKNNENLK 160 (481)
T ss_dssp HHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHTC----CC
T ss_pred HHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC-CCCCCHHHHHHHHHHHhhCcCcCCc
Confidence 7788999999998632 27888889999999999888653 3432 344443321 11
Q ss_pred -eEEEcCCc--HHhh----cCCceEEecCCCC--CHHHHHHHHHHhhhcCC--eEEcCccchhhHHHhhcchHHHHHHHH
Q 024016 122 -FIRVMPNT--PSAV----GEAATVMSLGGTA--TEEDGELIGKLFGSVGK--IWRADEKLFDAITGLSGSGPAYIFLAI 190 (274)
Q Consensus 122 -~~~~~p~~--~~~~----~~g~~~i~~~~~~--~~~~~~~v~~ll~~~g~--~~~~~e~~~~~~~a~~~~~~~~~~~~~ 190 (274)
.+...|.. |... .....++..+... +++..+.++++++.++. .++.++-.-..+..+.. +.+.....
T Consensus 161 ~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~--N~~~a~~i 238 (481)
T 2o3j_A 161 FQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVA--NAFLAQRI 238 (481)
T ss_dssp EEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHH--HHHHHHHH
T ss_pred eEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHH--HHHHHHHH
Confidence 12334431 1110 1111333333211 12577899999999984 35544322233333322 33433333
Q ss_pred HHHH---HHHHHcCCCHHHHHHHHH
Q 024016 191 EALA---DGGVAAGLPRELALGLAS 212 (274)
Q Consensus 191 ~~l~---e~~~~~Gl~~~~~~~~~~ 212 (274)
..+. ..+.+.|++.++..+.+.
T Consensus 239 a~~nE~~~la~~~Gid~~~v~~~~~ 263 (481)
T 2o3j_A 239 SSINSISAVCEATGAEISEVAHAVG 263 (481)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHc
Confidence 3333 345689999998877665
No 80
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.66 E-value=1.4e-15 Score=138.21 Aligned_cols=190 Identities=18% Similarity=0.166 Sum_probs=125.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-------C-------------ceeccCchhh
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-------G-------------VKVLSDNNAV 68 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~-------g-------------~~~~~~~~~~ 68 (274)
-.|||+|||+|.||.++|..|.++|| +|++| ||++++++.+.+. | +..++++.++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~----~V~~~-d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a 81 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH----DVFCL-DVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAA 81 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHH
Confidence 35899999999999999999999999 99999 9999999888752 2 3455666677
Q ss_pred ccCCCEEEEeeCc----------ccHHHHHHHhccccCCCCEEEEecCCCCH---HHHHHhhC-----C---Cc-eEEEc
Q 024016 69 VEYSDVVVFSVKP----------QVVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTG-----H---SR-FIRVM 126 (274)
Q Consensus 69 ~~~aDiIil~v~~----------~~~~~v~~~i~~~l~~~~~vis~~~g~~~---~~l~~~~~-----~---~~-~~~~~ 126 (274)
+++||+||+|||. +.++++++++.++++++++||..+ ++++ +.+.+.+. + .. .+...
T Consensus 82 ~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S-Tv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~ 160 (478)
T 2y0c_A 82 VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS-TVPVGTAERVRAAVAEELAKRGGDQMFSVVSN 160 (478)
T ss_dssp HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEEC
T ss_pred hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CcCCCchHHHHHHHHHHhcCCCCCccEEEEEC
Confidence 8899999999986 789999999999999998888764 6543 23332221 1 11 12233
Q ss_pred CCcHHhhcCCc---------eEEecCCCCCH----HHHHHHHHHhhhcCC---eEEcCccchhhHHHhhcchHHHHHHHH
Q 024016 127 PNTPSAVGEAA---------TVMSLGGTATE----EDGELIGKLFGSVGK---IWRADEKLFDAITGLSGSGPAYIFLAI 190 (274)
Q Consensus 127 p~~~~~~~~g~---------~~i~~~~~~~~----~~~~~v~~ll~~~g~---~~~~~e~~~~~~~a~~~~~~~~~~~~~ 190 (274)
|.. ...|. .++..+. ++ +..+.++++++.+++ .++.+.-.-..+..+. .+.+.....
T Consensus 161 Pe~---~~eG~~~~~~~~p~~iviG~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~--~N~~~a~~i 233 (478)
T 2y0c_A 161 PEF---LKEGAAVDDFTRPDRIVIGCD--DDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYA--ANAMLATRI 233 (478)
T ss_dssp CCC---CCTTCHHHHHHSCSCEEEECC--SSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHH--HHHHHHHHH
T ss_pred hhh---hcccceeeccCCCCEEEEEEC--CCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHH--HHHHHHHHH
Confidence 321 22222 2333322 34 678899999998764 3444332222223332 233443333
Q ss_pred HHH---HHHHHHcCCCHHHHHHHH
Q 024016 191 EAL---ADGGVAAGLPRELALGLA 211 (274)
Q Consensus 191 ~~l---~e~~~~~Gl~~~~~~~~~ 211 (274)
..+ ...+.+.|++.++..+.+
T Consensus 234 a~~nE~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 234 SFMNELANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHH
Confidence 333 334678999998766544
No 81
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.66 E-value=4.4e-16 Score=136.76 Aligned_cols=94 Identities=19% Similarity=0.233 Sum_probs=80.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-Cc--------------eeccCchhhccCC
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-GV--------------KVLSDNNAVVEYS 72 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~-g~--------------~~~~~~~~~~~~a 72 (274)
|++|||+|||+|.||..++..|.++|+ +|++| +|++++.+.+.+. +. ...+++.++++++
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQ----SVLAW-DIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcC
Confidence 456899999999999999999999999 99999 9999998888764 32 2445666778899
Q ss_pred CEEEEeeCcccHHHHHHHhccccCCCCEEEEecC
Q 024016 73 DVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 73 DiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
|+||+|+|+....+++.++.+.++++++||++.+
T Consensus 77 D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 77 DVILIVVPAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp SEEEECSCGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred CEEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 9999999999999999999999999999998844
No 82
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.65 E-value=1.6e-14 Score=123.98 Aligned_cols=152 Identities=14% Similarity=0.094 Sum_probs=122.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH-----------HcC--------------ceeccC
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE-----------SIG--------------VKVLSD 64 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~-----------~~g--------------~~~~~~ 64 (274)
..||+|||+|.||+.||..+..+|+ +|++| |++++..+... +.| ++.+++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~----~V~l~-D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~ 80 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF----RVKLY-DIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTN 80 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccc
Confidence 4589999999999999999999999 99999 99987654322 111 233456
Q ss_pred chhhccCCCEEEEeeCcc--cHHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEe
Q 024016 65 NNAVVEYSDVVVFSVKPQ--VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMS 141 (274)
Q Consensus 65 ~~~~~~~aDiIil~v~~~--~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~ 141 (274)
..+++++||+|+-|+|-+ .-++++.+|....++++++-|.++++++..+.+.+. ..+++..|+..|...-. ..-++
T Consensus 81 l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~-LVEiv 159 (319)
T 3ado_A 81 LAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIP-LVELV 159 (319)
T ss_dssp HHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCC-EEEEE
T ss_pred hHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccc-hHHhc
Confidence 677899999999999843 456899999999999999999999999999988765 35788899877766543 33456
Q ss_pred cCCCCCHHHHHHHHHHhhhcCCe-EEc
Q 024016 142 LGGTATEEDGELIGKLFGSVGKI-WRA 167 (274)
Q Consensus 142 ~~~~~~~~~~~~v~~ll~~~g~~-~~~ 167 (274)
+++.++++.++.+..+.+.+|+. +++
T Consensus 160 ~g~~Ts~~~~~~~~~~~~~~gk~pv~v 186 (319)
T 3ado_A 160 PHPETSPATVDRTHALMRKIGQSPVRV 186 (319)
T ss_dssp ECTTCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCCcHHHHHHHHHHHHHhCCccCCc
Confidence 78888999999999999999975 544
No 83
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.64 E-value=8e-15 Score=130.72 Aligned_cols=192 Identities=14% Similarity=0.115 Sum_probs=121.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc------------------eeccCchhhccCC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV------------------KVLSDNNAVVEYS 72 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~------------------~~~~~~~~~~~~a 72 (274)
|||+|||+|.||.+++..|.+ || +|++| +|++++.+.+.+.+. ..++++.+.++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~----~V~~~-d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~a 74 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QN----EVTIV-DILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEA 74 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TS----EEEEE-CSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHhC-CC----EEEEE-ECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCC
Confidence 589999999999999999999 98 99999 999999988876443 4445666778899
Q ss_pred CEEEEeeCcc-----------cHHHHHHHhccccCCCCEEEE-ecCCCC-HHHHHHhhCCCceEEEcCCc--HHh----h
Q 024016 73 DVVVFSVKPQ-----------VVKDVAMQIRPLLSRKKLLVS-VAAGVK-LKDLQEWTGHSRFIRVMPNT--PSA----V 133 (274)
Q Consensus 73 DiIil~v~~~-----------~~~~v~~~i~~~l~~~~~vis-~~~g~~-~~~l~~~~~~~~~~~~~p~~--~~~----~ 133 (274)
|+||+|||+. .++++++++.+ ++++++||. .+.+.. .+.+.+.++...+. ..|.. |.. .
T Consensus 75 Dvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v~-~~Pe~~~~G~a~~~~ 152 (402)
T 1dlj_A 75 ELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTDRII-FSPEFLRESKALYDN 152 (402)
T ss_dssp SEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCSCEE-ECCCCCCTTSTTHHH
T ss_pred CEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCCeEE-ECCccccCcchhhcc
Confidence 9999999876 58999999988 889999886 334443 35666666533333 33421 110 0
Q ss_pred cCCceEEecCCCC----CHHHHHHHHHHhhh-cCC---eEEcCccchhhHHHhhcchHHHHHHHH---HHHHHHHHHcCC
Q 024016 134 GEAATVMSLGGTA----TEEDGELIGKLFGS-VGK---IWRADEKLFDAITGLSGSGPAYIFLAI---EALADGGVAAGL 202 (274)
Q Consensus 134 ~~g~~~i~~~~~~----~~~~~~~v~~ll~~-~g~---~~~~~e~~~~~~~a~~~~~~~~~~~~~---~~l~e~~~~~Gl 202 (274)
.....++..+... ..+..+.+.++|.. ... .++.+.-....+..+. .+.+....+ .-+...+.+.|+
T Consensus 153 ~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~--~N~~~a~~ia~~nE~~~l~~~~Gi 230 (402)
T 1dlj_A 153 LYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLF--ANTYLALRVAYFNELDTYAESRKL 230 (402)
T ss_dssp HSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1111133333211 11556778888865 322 3443332222222222 133333322 233334678999
Q ss_pred CHHHHHHHHH
Q 024016 203 PRELALGLAS 212 (274)
Q Consensus 203 ~~~~~~~~~~ 212 (274)
+.++..+.+.
T Consensus 231 d~~~v~~~~~ 240 (402)
T 1dlj_A 231 NSHMIIQGIS 240 (402)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHhc
Confidence 9998877664
No 84
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.64 E-value=3.3e-15 Score=135.11 Aligned_cols=194 Identities=14% Similarity=0.098 Sum_probs=126.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHH----HHHHHHH---------------------cC-cee
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLK----RRDAFES---------------------IG-VKV 61 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~----~~~~l~~---------------------~g-~~~ 61 (274)
..|||+|||+|.||.+||..|.++ ||. +|++| ||+++ +++.+.+ .| +..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~---~V~~~-D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ 92 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFE---KVLGF-QRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC 92 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCC---EEEEE-CCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCC---eEEEE-ECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE
Confidence 468999999999999999999999 862 79999 99999 8877754 12 334
Q ss_pred ccCchhhccCCCEEEEeeCcc---------c---HHHHHHHhccccCCCCEEEEecCCCCH---HHHH-----HhhCC--
Q 024016 62 LSDNNAVVEYSDVVVFSVKPQ---------V---VKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQ-----EWTGH-- 119 (274)
Q Consensus 62 ~~~~~~~~~~aDiIil~v~~~---------~---~~~v~~~i~~~l~~~~~vis~~~g~~~---~~l~-----~~~~~-- 119 (274)
+++ .+++++||+||+|||.. + +..+.+++.++++++++||.. +++++ +.+. +..+.
T Consensus 93 ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~-STv~pgtt~~v~~~ile~~~g~~~ 170 (478)
T 3g79_A 93 TPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLE-STITPGTTEGMAKQILEEESGLKA 170 (478)
T ss_dssp ESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEEC-SCCCTTTTTTHHHHHHHHHHCCCB
T ss_pred eCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEe-CCCChHHHHHHHHHHHHHhcCCCc
Confidence 444 67889999999999743 2 566778888899999988865 45543 2222 22221
Q ss_pred -Cc-eEEEcCCc--HHhhcC---CceEEecCCCCCHHHHHHHHHHhhhc-CC-eEEcCccchhhHHHhhcchHHHHHHHH
Q 024016 120 -SR-FIRVMPNT--PSAVGE---AATVMSLGGTATEEDGELIGKLFGSV-GK-IWRADEKLFDAITGLSGSGPAYIFLAI 190 (274)
Q Consensus 120 -~~-~~~~~p~~--~~~~~~---g~~~i~~~~~~~~~~~~~v~~ll~~~-g~-~~~~~e~~~~~~~a~~~~~~~~~~~~~ 190 (274)
.. .+-..|.. +..... ...-++.| .+++..+.++++++.+ +. .+++++..-..++.++ .+.|.+..+
T Consensus 171 ~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~--~N~~~a~~I 246 (478)
T 3g79_A 171 GEDFALAHAPERVMVGRLLKNIREHDRIVGG--IDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTA--ENTFRDLQI 246 (478)
T ss_dssp TTTBEEEECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHH--HHHHHHHHH
T ss_pred CCceeEEeCCccCCccchhhhhcCCcEEEEe--CCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHH--HHHHHHHHH
Confidence 11 12233421 111100 11123333 2678889999999999 65 4665543333344443 245555544
Q ss_pred HHHHHH---HHHcCCCHHHHHHHHH
Q 024016 191 EALADG---GVAAGLPRELALGLAS 212 (274)
Q Consensus 191 ~~l~e~---~~~~Gl~~~~~~~~~~ 212 (274)
..+.|. +.+.|+|.++..+.+.
T Consensus 247 a~~nE~~~l~e~~GiD~~~v~~~~~ 271 (478)
T 3g79_A 247 AAINQLALYCEAMGINVYDVRTGVD 271 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHC
Confidence 444444 5699999998887664
No 85
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.62 E-value=7.2e-16 Score=131.99 Aligned_cols=150 Identities=12% Similarity=0.092 Sum_probs=103.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc---eeccCchhhc-cCCCEEEEeeCcccHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV---KVLSDNNAVV-EYSDVVVFSVKPQVVK 85 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~---~~~~~~~~~~-~~aDiIil~v~~~~~~ 85 (274)
+|||+|||+|+||++++..|.++|+ +|++| +|+++..+.....|. .+..++.+.+ .++|+||+|||+++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~----~V~~~-~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~~~ 76 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLP----HTTLI-GRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQLD 76 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCT----TCEEE-ESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGGHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCC----eEEEE-EeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccCHH
Confidence 3799999999999999999999998 99999 998765432112232 2333445544 7899999999999999
Q ss_pred HHHHHhccccCCCCEEEEecCCCCHHHHHHhhCCCceEEEcCC------cHHhhcCCceEEecCCCCCHHHHHHHHHHhh
Q 024016 86 DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPN------TPSAVGEAATVMSLGGTATEEDGELIGKLFG 159 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~~~~~~~~~p~------~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~ 159 (274)
++++++.+.++++++||++.+|+..+.. ++..+++..... .|..+..+...+..+ +.+..+.+.++|+
T Consensus 77 ~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~~~~v~~g~~~~~a~~~~pg~v~~~~~~~~~~---~~~~~~~l~~~l~ 150 (294)
T 3g17_A 77 AVIPHLTYLAHEDTLIILAQNGYGQLEH---IPFKNVCQAVVYISGQKKGDVVTHFRDYQLRIQ---DNALTRQFRDLVQ 150 (294)
T ss_dssp HHGGGHHHHEEEEEEEEECCSSCCCGGG---CCCSCEEECEEEEEEEEETTEEEEEEEEEEEEE---CSHHHHHHHHHTT
T ss_pred HHHHHHHHhhCCCCEEEEeccCcccHhh---CCCCcEEEEEEEEEEEEcCCCEEEECCCEEecC---ccHHHHHHHHHHH
Confidence 9999999988888999999999987654 554344332211 121111111222222 3466788889998
Q ss_pred hcCCeEEcCcc
Q 024016 160 SVGKIWRADEK 170 (274)
Q Consensus 160 ~~g~~~~~~e~ 170 (274)
..|...+.+++
T Consensus 151 ~~~~~~~~~~d 161 (294)
T 3g17_A 151 DSQIDIVLEAN 161 (294)
T ss_dssp TSSCEEEEESS
T ss_pred hCCCceEEChH
Confidence 88866554443
No 86
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.62 E-value=1.3e-14 Score=129.60 Aligned_cols=189 Identities=16% Similarity=0.108 Sum_probs=123.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-------------------C-ceeccCchhhc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-------------------G-VKVLSDNNAVV 69 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~-------------------g-~~~~~~~~~~~ 69 (274)
..|..|||+|.||.+||.+|.++|| +|++| ||++++++.+.+. | +..+++ +
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~----~V~~~-D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd----~ 81 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGV----DVLGV-DINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTT----P 81 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESS----C
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCc----h
Confidence 3689999999999999999999999 99999 9999999988762 1 222222 4
Q ss_pred cCCCEEEEeeCccc------------HHHHHHHhccccCCCCEEEEecCCCCHHH---HHHhh-C--CC----c-eEEEc
Q 024016 70 EYSDVVVFSVKPQV------------VKDVAMQIRPLLSRKKLLVSVAAGVKLKD---LQEWT-G--HS----R-FIRVM 126 (274)
Q Consensus 70 ~~aDiIil~v~~~~------------~~~v~~~i~~~l~~~~~vis~~~g~~~~~---l~~~~-~--~~----~-~~~~~ 126 (274)
++||+||+|||... +..+.+++.++++++++||.. +++++.. +.+.+ . +. . .+-..
T Consensus 82 ~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~-STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~ 160 (431)
T 3ojo_A 82 EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVE-STIAPKTMDDFVKPVIENLGFTIGEDIYLVHC 160 (431)
T ss_dssp CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEEC-SCCCTTHHHHTHHHHHHTTTCCBTTTEEEEEC
T ss_pred hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEe-cCCChhHHHHHHHHHHHHcCCCcCCCeEEEEC
Confidence 58999999997432 677778899999999988855 4666432 22211 1 11 1 12233
Q ss_pred CC-----cHHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCC-eEEcCccchhhHHHhhcchHHHHHHHHHHHHHH---H
Q 024016 127 PN-----TPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGK-IWRADEKLFDAITGLSGSGPAYIFLAIEALADG---G 197 (274)
Q Consensus 127 p~-----~~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~-~~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~ 197 (274)
|. .........+-++.|. +++..+.++++++.++. .+++++..-..++.++ .+.|.+..+..+.|. +
T Consensus 161 Pe~~~~G~A~~~~~~p~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~--~N~~~a~~Ia~~nE~~~l~ 236 (431)
T 3ojo_A 161 PERVLPGKILEELVHNNRIIGGV--TKACIEAGKRVYRTFVQGEMIETDARTAEMSKLM--ENTYRDVNIALANELTKIC 236 (431)
T ss_dssp CCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCcchhhcccCCCEEEEeC--CHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 42 1111111122334342 68899999999999986 4665543334444443 245555444444444 5
Q ss_pred HHcCCCHHHHHHHHH
Q 024016 198 VAAGLPRELALGLAS 212 (274)
Q Consensus 198 ~~~Gl~~~~~~~~~~ 212 (274)
.+.|+|.++..+.+.
T Consensus 237 e~~GiD~~~v~~~~~ 251 (431)
T 3ojo_A 237 NNLNINVLDVIEMAN 251 (431)
T ss_dssp HHTTCCHHHHHHHHT
T ss_pred HHcCCCHHHHHHHHc
Confidence 689999998877654
No 87
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.51 E-value=7e-13 Score=116.63 Aligned_cols=158 Identities=16% Similarity=0.146 Sum_probs=108.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCC----CCCcEEEEeCCCHHH-----HHHHHH--------------cCceeccCchh
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVL----PPDRICTAVHSNLKR-----RDAFES--------------IGVKVLSDNNA 67 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~----~~~~v~v~~~r~~~~-----~~~l~~--------------~g~~~~~~~~~ 67 (274)
.||+|||+|.||+++|..|.++|+- ...+|++| .|+++. .+.+.+ .++.+.+|..+
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw-~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~ 113 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMW-VFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLID 113 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEE-CCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEE-EcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHH
Confidence 5999999999999999999998750 00149999 887652 233322 13456677888
Q ss_pred hccCCCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCCCCH---------HHHHHhhCCCce-EEEcCCcHHhhcCCc
Q 024016 68 VVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL---------KDLQEWTGHSRF-IRVMPNTPSAVGEAA 137 (274)
Q Consensus 68 ~~~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~---------~~l~~~~~~~~~-~~~~p~~~~~~~~g~ 137 (274)
+++++|+||++||.+.++++++++.++++++..+|++++|+.. +.+.+.++ .++ +-.-|+++.++..+.
T Consensus 114 al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~-~~~~vLsGPs~A~EVa~~~ 192 (391)
T 4fgw_A 114 SVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELG-IQCGALSGANIATEVAQEH 192 (391)
T ss_dssp HHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHC-CEEEEEECSCCHHHHHTTC
T ss_pred HHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhC-ccceeccCCchHHHhhcCC
Confidence 9999999999999999999999999999999999999999752 23444444 233 234588888887664
Q ss_pred -eEEecC-CC-------CCHHHHHHHHHHhhhcCCeEEcCcc
Q 024016 138 -TVMSLG-GT-------ATEEDGELIGKLFGSVGKIWRADEK 170 (274)
Q Consensus 138 -~~i~~~-~~-------~~~~~~~~v~~ll~~~g~~~~~~e~ 170 (274)
+.++.. .+ .++...+.++.+|..-...++.+.+
T Consensus 193 pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~D 234 (391)
T 4fgw_A 193 WSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIED 234 (391)
T ss_dssp CEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESC
T ss_pred CceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 333221 11 1122346677887664434455544
No 88
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=99.46 E-value=2.2e-11 Score=106.72 Aligned_cols=205 Identities=17% Similarity=0.145 Sum_probs=141.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH------HHHHHHHHcCceeccCchhhccCCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL------KRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~------~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~ 82 (274)
+.+||+|||+|+-|.+-|.+|.++|. +|.+- -|.. .+.+++.+.|.++. +..|+++.+|+|++.+|+.
T Consensus 36 kgK~IaVIGyGsQG~AqAlNLRDSGv----~V~Vg-lr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~~ADvV~~L~PD~ 109 (491)
T 3ulk_A 36 QGKKVVIVGCGAQGLNQGLNMRDSGL----DISYA-LRKEAIAEKRASWRKATENGFKVG-TYEELIPQADLVINLTPDK 109 (491)
T ss_dssp TTSEEEEESCSHHHHHHHHHHHHTTC----EEEEE-ECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGGGCSEEEECSCGG
T ss_pred cCCEEEEeCCChHhHHHHhHHHhcCC----cEEEE-eCCCCcccccchHHHHHHCCCEec-CHHHHHHhCCEEEEeCChh
Confidence 45899999999999999999999999 99887 6632 34456666888875 6889999999999999999
Q ss_pred cHHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHh-------hcCCceEEecC---CCCCHHHH
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSA-------VGEAATVMSLG---GTATEEDG 151 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~-------~~~g~~~i~~~---~~~~~~~~ 151 (274)
.-.++++.|.|++++|+.+. .+.|..+..-.-..| +..++-+-|..|.+ .|.|+..++.- .+.+-.+.
T Consensus 110 ~q~~vy~~I~p~lk~G~~L~-faHGFnI~~~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~liAVhqeqD~sG~a~ 188 (491)
T 3ulk_A 110 QHSDVVRTVQPLMKDGAALG-YSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGM 188 (491)
T ss_dssp GHHHHHHHHGGGSCTTCEEE-ESSCHHHHTTCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEEEEECGGGCTTSCHH
T ss_pred hHHHHHHHHHhhCCCCCEEE-ecCcccccccccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceEEEEEeCCCCchhHH
Confidence 99999999999999999877 566764432111112 46677777876653 25676554422 23345667
Q ss_pred HHHHHHhhhcCCe----EEcC---cc---chhhHHHhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 024016 152 ELIGKLFGSVGKI----WRAD---EK---LFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAASM 221 (274)
Q Consensus 152 ~~v~~ll~~~g~~----~~~~---e~---~~~~~~a~~~~~~~~~~~~~~~l~e~~~~~Gl~~~~~~~~~~~~~~~~~~~ 221 (274)
+....+...+|.. +..+ |. .+..-+.++| .+..++.+..|.+++.|.+++.+..+....++-...+
T Consensus 189 ~~AlayA~aiG~~raGvieTTF~eEtetDLfGEQaVLcG----gl~~li~agFetLveaGy~P~~a~~~~~~e~klIvdl 264 (491)
T 3ulk_A 189 AIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCG----MLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEA 264 (491)
T ss_dssp HHHHHHHHHHTGGGTCEEECCHHHHHHHHHHHHHTTTTH----HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCceeeccHHHHHHHHHHhhHHHHHH----HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhHHHHH
Confidence 7888888888842 2222 22 2333334443 3344566667888999999988776555444444444
Q ss_pred HHh
Q 024016 222 VTK 224 (274)
Q Consensus 222 ~~~ 224 (274)
+.+
T Consensus 265 i~e 267 (491)
T 3ulk_A 265 LKQ 267 (491)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 89
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.45 E-value=2e-11 Score=115.80 Aligned_cols=155 Identities=19% Similarity=0.207 Sum_probs=122.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---------------c-------CceeccCc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---------------I-------GVKVLSDN 65 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~---------------~-------g~~~~~~~ 65 (274)
+...||+|||+|.||+.||..+..+|+ +|+++ |++++.++...+ . .++..++
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~----~V~l~-D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~- 387 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGI----SVVAV-ESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSS- 387 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESC-
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCC----chhcc-cchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCc-
Confidence 345799999999999999999999999 99999 999976543221 0 1223333
Q ss_pred hhhccCCCEEEEeeCc--ccHHHHHHHhccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEec
Q 024016 66 NAVVEYSDVVVFSVKP--QVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSL 142 (274)
Q Consensus 66 ~~~~~~aDiIil~v~~--~~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~~ 142 (274)
.+.+.+||+||-||+- +.-++++.++....++++++-|.++++++..+.+.+. ..+++..|...|...-. ..-++.
T Consensus 388 ~~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~-LVEvi~ 466 (742)
T 3zwc_A 388 TKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMR-LLEVIP 466 (742)
T ss_dssp GGGGGSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCC-EEEEEE
T ss_pred HHHHhhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCc-eEEEec
Confidence 3457899999999974 3456889999999999999999999999999988765 35788888877766533 333556
Q ss_pred CCCCCHHHHHHHHHHhhhcCCe-EEcCc
Q 024016 143 GGTATEEDGELIGKLFGSVGKI-WRADE 169 (274)
Q Consensus 143 ~~~~~~~~~~~v~~ll~~~g~~-~~~~e 169 (274)
++.++++.++.+..+.+.+|+. +++.+
T Consensus 467 g~~Ts~e~~~~~~~~~~~lgK~pV~vkd 494 (742)
T 3zwc_A 467 SRYSSPTTIATVMSLSKKIGKIGVVVGN 494 (742)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCcccCC
Confidence 7888999999999999999986 66543
No 90
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.40 E-value=1.6e-12 Score=119.68 Aligned_cols=164 Identities=12% Similarity=0.149 Sum_probs=110.4
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
.....++|||||+|+||+++|++|...|+ +|++| ||++.. +...+.|+... +..+++++||+|++|+|+. ..
T Consensus 138 ~~l~g~~vgIIG~G~IG~~vA~~l~~~G~----~V~~~-d~~~~~-~~a~~~g~~~~-~l~e~~~~aDvV~l~~P~~~~t 210 (529)
T 1ygy_A 138 TEIFGKTVGVVGLGRIGQLVAQRIAAFGA----YVVAY-DPYVSP-ARAAQLGIELL-SLDDLLARADFISVHLPKTPET 210 (529)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CTTSCH-HHHHHHTCEEC-CHHHHHHHCSEEEECCCCSTTT
T ss_pred cccCCCEEEEEeeCHHHHHHHHHHHhCCC----EEEEE-CCCCCh-hHHHhcCcEEc-CHHHHHhcCCEEEECCCCchHH
Confidence 34566899999999999999999999998 99999 998743 34455787765 7888899999999999976 67
Q ss_pred HHHHHH-hccccCCCCEEEEecCCCC--HHHHHHhhCCCce----EEEcCCcHH----hhcCCceEEecCCC-CCHHHHH
Q 024016 85 KDVAMQ-IRPLLSRKKLLVSVAAGVK--LKDLQEWTGHSRF----IRVMPNTPS----AVGEAATVMSLGGT-ATEEDGE 152 (274)
Q Consensus 85 ~~v~~~-i~~~l~~~~~vis~~~g~~--~~~l~~~~~~~~~----~~~~p~~~~----~~~~g~~~i~~~~~-~~~~~~~ 152 (274)
..++.+ +.+.+++++++|+++.|-. ...+.+.+...++ ..+++.+|. .......++++... .+.+..+
T Consensus 211 ~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~ 290 (529)
T 1ygy_A 211 AGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQD 290 (529)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHH
T ss_pred HHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHH
Confidence 777754 6677889999999876543 3445555542222 122333332 11222345666544 4566655
Q ss_pred H-----HHHHhhhcCC-e----EEcC-ccchhhHH
Q 024016 153 L-----IGKLFGSVGK-I----WRAD-EKLFDAIT 176 (274)
Q Consensus 153 ~-----v~~ll~~~g~-~----~~~~-e~~~~~~~ 176 (274)
. ++++.+.++. . +.++ ++.||.+.
T Consensus 291 ~~~~~~~~~l~~~l~~~~~~~~v~~~~~~~hd~i~ 325 (529)
T 1ygy_A 291 RAGTDVAESVRLALAGEFVPDAVNVGGGVVNEEVA 325 (529)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTBCSCCSTTSCTTTT
T ss_pred HHHHHHHHHHHHHHcCCCCCcccCCcccccchhhh
Confidence 4 5566665553 2 4456 56777654
No 91
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.39 E-value=1.1e-12 Score=117.12 Aligned_cols=94 Identities=16% Similarity=0.220 Sum_probs=77.9
Q ss_pred CeEEEEcccHHHHHHHHHHHh-CCCCCCCcEEEEeC---CCHHHHHHH-HHcC------------c-------eeccCch
Q 024016 11 FILGFIGAGKMAESIAKGVAK-SGVLPPDRICTAVH---SNLKRRDAF-ESIG------------V-------KVLSDNN 66 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~-~g~~~~~~v~v~~~---r~~~~~~~l-~~~g------------~-------~~~~~~~ 66 (274)
|||+|||+|.||++++..|.+ +|+ +|++| + |++++.+.+ .+.| . .+.+++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~----~V~~~-~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGV----EVRVL-TLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPE 77 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTE----EEEEE-CCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC----EEEEE-eCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHH
Confidence 699999999999999999988 599 99999 9 888888774 3333 1 1344566
Q ss_pred hhccCCCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 67 AVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 67 ~~~~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
++++++|+||+|||++..+++++++.+.++++++|++..++..
T Consensus 78 ~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 78 IAISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp HHHTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred HHhCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 7788999999999999999999999999999999998655554
No 92
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.34 E-value=2.3e-12 Score=112.53 Aligned_cols=108 Identities=16% Similarity=0.219 Sum_probs=85.7
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHH-hCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-c
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVA-KSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-V 83 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~-~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~ 83 (274)
.....++|||||+|+||+.+++.+. ..|+ +|++| +|++++.+...+.|+....+..+++++||+|++++|.. .
T Consensus 159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~ 233 (348)
T 2w2k_A 159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGM----KLVYY-DVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKL 233 (348)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCC----EEEEE-CSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGG
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHhcCC----EEEEE-CCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChH
Confidence 4456689999999999999999999 8998 99999 99887666555568776667788889999999999864 3
Q ss_pred HHHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 84 VKDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 84 ~~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
.+.++ .++.+.++++.++|+++.| +..+.+.+.+.
T Consensus 234 t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~ 271 (348)
T 2w2k_A 234 THHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALK 271 (348)
T ss_dssp GTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 55555 3455567899999988776 55667777665
No 93
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.32 E-value=1.7e-12 Score=112.66 Aligned_cols=107 Identities=15% Similarity=0.262 Sum_probs=83.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
.....+||||||+|+||..+++.|...|+ +|++| +|++++.+.+.+.|+... +..+++++||+|++++|+. ..
T Consensus 151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t 224 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRIGQAIARRLKPFGV----QRFLY-TGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPAT 224 (330)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTC----CEEEE-ESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTT
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-CCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChHH
Confidence 34566899999999999999999999998 99999 998776666666777765 7788889999999999864 44
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .++.+.++++.++|+++.| +..+.+.+.+.
T Consensus 225 ~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~ 261 (330)
T 2gcg_A 225 EGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALA 261 (330)
T ss_dssp TTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 5554 3455667899999988766 45566666554
No 94
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.31 E-value=3.5e-12 Score=110.14 Aligned_cols=106 Identities=13% Similarity=0.113 Sum_probs=83.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r-~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
....++|||||+|+||++++++|...|+ +|++| +| ++++ +...+.|+....+..+++++||+|++++|.. ..
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~-~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t 216 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDM----DIDYF-DTHRASS-SDEASYQATFHDSLDSLLSVSQFFSLNAPSTPET 216 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSCCCH-HHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-CCCCcCh-hhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHH
Confidence 4456899999999999999999999998 99999 99 8765 3444578776657888899999999999854 35
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 217 ~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~ 253 (320)
T 1gdh_A 217 RYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALE 253 (320)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 5555 3455678899999998766 45566666664
No 95
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.31 E-value=2.5e-12 Score=108.89 Aligned_cols=122 Identities=11% Similarity=0.191 Sum_probs=89.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
.+.++|+|||+|.||.+++..|.+.|+ +|++| +|++++++.+.+ .|+...++..+.++++|+||.|+|+....+
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~----~V~v~-~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~ 201 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA----KVFLW-NRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDE 201 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC----EEEEE-CSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTT
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC----EEEEE-ECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCC
Confidence 345799999999999999999999998 99999 999999888876 577766677788889999999999775432
Q ss_pred HHHHh-ccccCCCCEEEEecCCCCHHHHHHhhCCCceEEEcCCcHHhhcCCc
Q 024016 87 VAMQI-RPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAA 137 (274)
Q Consensus 87 v~~~i-~~~l~~~~~vis~~~g~~~~~l~~~~~~~~~~~~~p~~~~~~~~g~ 137 (274)
+...+ .+.++++++++++.. .....++.... ...+++|+.+..++++.
T Consensus 202 ~~~~i~~~~l~~g~~viDv~~-~~t~ll~~a~~--~g~~~v~g~~mlv~q~~ 250 (275)
T 2hk9_A 202 DPEIFNYDLIKKDHVVVDIIY-KETKLLKKAKE--KGAKLLDGLPMLLWQGI 250 (275)
T ss_dssp CCCSSCGGGCCTTSEEEESSS-SCCHHHHHHHH--TTCEEECSHHHHHHHHH
T ss_pred CCCCCCHHHcCCCCEEEEcCC-ChHHHHHHHHH--CcCEEECCHHHHHHHHH
Confidence 11112 245788999998876 44443433222 22356788777665543
No 96
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.30 E-value=1e-10 Score=104.41 Aligned_cols=197 Identities=13% Similarity=0.141 Sum_probs=121.9
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-------------------c-Cceecc
Q 024016 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-------------------I-GVKVLS 63 (274)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-------------------~-g~~~~~ 63 (274)
.|...++.+|+|||+|-+|..+|..|.+.|| +|+.+ |.++++.+.+.+ . .+..++
T Consensus 15 ~p~~~~m~~IaViGlGYVGLp~A~~~A~~G~----~V~g~-Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt 89 (444)
T 3vtf_A 15 VPRGSHMASLSVLGLGYVGVVHAVGFALLGH----RVVGY-DVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAE 89 (444)
T ss_dssp CCTTCCCCEEEEECCSHHHHHHHHHHHHHTC----EEEEE-CSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECS
T ss_pred CCCCCCCCEEEEEccCHHHHHHHHHHHhCCC----cEEEE-ECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEc
Confidence 4666677899999999999999999999999 99999 999999887753 1 234566
Q ss_pred CchhhccCCCEEEEeeC-c---------ccHHHHHHHhccccC---CCCEEEEecCCCCH---HH-HHHhh----CCCce
Q 024016 64 DNNAVVEYSDVVVFSVK-P---------QVVKDVAMQIRPLLS---RKKLLVSVAAGVKL---KD-LQEWT----GHSRF 122 (274)
Q Consensus 64 ~~~~~~~~aDiIil~v~-~---------~~~~~v~~~i~~~l~---~~~~vis~~~g~~~---~~-l~~~~----~~~~~ 122 (274)
+..++++.+|++|+||| | ..+..+.+.|.++++ ++++||-- +++++ +. ....+ ++..+
T Consensus 90 ~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~e-STVppGtte~~~~~~l~~~~~~~~f 168 (444)
T 3vtf_A 90 SAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVK-STVPPGTTEGLVARAVAEEAGGVKF 168 (444)
T ss_dssp SHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEEC-SCCCTTTTTTHHHHHHHTTTTTCCC
T ss_pred CHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEe-CCCCCchHHHHHHHHHHHhCCCCCc
Confidence 77888899999999996 2 136667777766664 56777732 32322 22 22222 22222
Q ss_pred -EEEcCC-----cHHhh-cCCceEEecCCCCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHHH---HHHH
Q 024016 123 -IRVMPN-----TPSAV-GEAATVMSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIF---LAIE 191 (274)
Q Consensus 123 -~~~~p~-----~~~~~-~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~---~~~~ 191 (274)
+...|. ..... ..-.-++..+ .++...+.+.++++.+... ++.+.. -..++.+.. +.|.+ .+++
T Consensus 169 ~v~~~PErl~eG~a~~d~~~~~riViG~--~~~~a~~~~~~ly~~~~~~~~~~~~~-~AE~~Kl~e--N~~ravnIa~~N 243 (444)
T 3vtf_A 169 SVASNPEFLREGSALEDFFKPDRIVIGA--GDERAASFLLDVYKAVDAPKLVMKPR-EAELVKYAS--NVFLALKISFAN 243 (444)
T ss_dssp EEEECCCCCCTTSHHHHHHSCSCEEEEE--SSHHHHHHHHHHTTTSCSCEEEECHH-HHHHHHHHH--HHHHHHHHHHHH
T ss_pred eeecCcccccCCccccccccCCcEEEcC--CCHHHHHHHHHHHhccCCCEEEechh-HHHHHHHHH--HHHHHHHHHHHH
Confidence 223332 21111 1111123222 2567788899999888765 444422 122233321 33432 3455
Q ss_pred HHHHHHHHcCCCHHHHHHHH
Q 024016 192 ALADGGVAAGLPRELALGLA 211 (274)
Q Consensus 192 ~l~e~~~~~Gl~~~~~~~~~ 211 (274)
.++..+.+.|+|..+..+.+
T Consensus 244 Ela~ice~~GiDv~eV~~a~ 263 (444)
T 3vtf_A 244 EVGLLAKRLGVDTYRVFEAV 263 (444)
T ss_dssp HHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHh
Confidence 56666789999988766654
No 97
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.26 E-value=9.4e-12 Score=108.41 Aligned_cols=108 Identities=17% Similarity=0.246 Sum_probs=85.0
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~ 84 (274)
.....++|||||+|+||..+|+.|...|+ +|.+| +|++...+.+.+.|+....+..+++++||+|++++|. ...
T Consensus 160 ~~l~gktvGIIG~G~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t 234 (351)
T 3jtm_A 160 YDLEGKTIGTVGAGRIGKLLLQRLKPFGC----NLLYH-DRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKT 234 (351)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCC----EEEEE-CSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTT
T ss_pred ccccCCEEeEEEeCHHHHHHHHHHHHCCC----EEEEe-CCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHH
Confidence 34567899999999999999999999998 99999 9987666666667887777889999999999999984 344
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 235 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 235 RGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHH
Confidence 4444 3455567899999988754 34556666664
No 98
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.26 E-value=5.4e-12 Score=109.64 Aligned_cols=105 Identities=19% Similarity=0.242 Sum_probs=81.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCccc-HH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-VK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~-~~ 85 (274)
....++|||||+|+||..+++.|...|+ +|++| +|++++ +...+.|+.. .+..+++++||+|++|+|... .+
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~----~V~~~-d~~~~~-~~~~~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~ 219 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNM----RILYY-SRTRKE-EVERELNAEF-KPLEDLLRESDFVVLAVPLTRETY 219 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCH-HHHHHHCCEE-CCHHHHHHHCSEEEECCCCCTTTT
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCC----EEEEE-CCCcch-hhHhhcCccc-CCHHHHHhhCCEEEECCCCChHHH
Confidence 4556899999999999999999999998 99999 999876 5455567765 477788899999999998654 55
Q ss_pred HHH-HHhccccCCCCEEEEecCCCC--HHHHHHhhC
Q 024016 86 DVA-MQIRPLLSRKKLLVSVAAGVK--LKDLQEWTG 118 (274)
Q Consensus 86 ~v~-~~i~~~l~~~~~vis~~~g~~--~~~l~~~~~ 118 (274)
.++ .++.+.+++++++|+++.|.. .+.+.+.+.
T Consensus 220 ~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~ 255 (334)
T 2dbq_A 220 HLINEERLKLMKKTAILINIARGKVVDTNALVKALK 255 (334)
T ss_dssp TCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 555 355566889999999876643 345655554
No 99
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.25 E-value=1.5e-11 Score=108.45 Aligned_cols=108 Identities=13% Similarity=0.175 Sum_probs=84.2
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~ 84 (274)
.....++|||||+|+||..+|++|...|+ +|++| +|++.+.+...+.|+....+..+++++||+|++++|. ...
T Consensus 187 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~----~V~~~-d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t 261 (393)
T 2nac_A 187 YDLEAMHVGTVAAGRIGLAVLRRLAPFDV----HLHYT-DRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPET 261 (393)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHGGGTC----EEEEE-CSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTT
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCC----EEEEE-cCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHH
Confidence 34567899999999999999999999998 99999 9987655555557887666788999999999999984 345
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 262 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 298 (393)
T 2nac_A 262 EHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALE 298 (393)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHH
Confidence 5555 3455678899999998765 33455666664
No 100
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.24 E-value=1.5e-11 Score=107.85 Aligned_cols=108 Identities=17% Similarity=0.222 Sum_probs=84.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCc-EEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-c
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDR-ICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-V 83 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~-v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~ 83 (274)
.....++|||||+|+||..+++.|...|+ + |++| +|++.+.+...+.|+....+..+++++||+|++++|.. .
T Consensus 160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~----~~V~~~-d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~ 234 (364)
T 2j6i_A 160 YDIEGKTIATIGAGRIGYRVLERLVPFNP----KELLYY-DYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAG 234 (364)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGCC----SEEEEE-CSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTT
T ss_pred ccCCCCEEEEECcCHHHHHHHHHHHhCCC----cEEEEE-CCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChH
Confidence 44567899999999999999999999998 8 9999 99876666666678776667889999999999999864 4
Q ss_pred HHHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 84 VKDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 84 ~~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
.+.++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 235 t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 235 TKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 55544 3455668899999988765 34556666664
No 101
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.24 E-value=5.9e-12 Score=109.08 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=80.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
.....++|||||+|+||+++|+.|...|+ +|++| +|++++. .|.....+..+++++||+|++++|+. ..
T Consensus 160 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~----~V~~~-dr~~~~~-----~g~~~~~~l~ell~~aDvVil~vP~~~~t 229 (333)
T 3ba1_A 160 TKFSGKRVGIIGLGRIGLAVAERAEAFDC----PISYF-SRSKKPN-----TNYTYYGSVVELASNSDILVVACPLTPET 229 (333)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHTTTC----CEEEE-CSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCCGGG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-CCCchhc-----cCceecCCHHHHHhcCCEEEEecCCChHH
Confidence 34566899999999999999999999998 99999 9987653 25655667888899999999999974 46
Q ss_pred HHHH-HHhccccCCCCEEEEecCCCC--HHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAGVK--LKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g~~--~~~l~~~~~ 118 (274)
+.++ .+..+.+++++++|+++.|.. .+.+.+.+.
T Consensus 230 ~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~ 266 (333)
T 3ba1_A 230 THIINREVIDALGPKGVLINIGRGPHVDEPELVSALV 266 (333)
T ss_dssp TTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 6655 345556789999999877643 356665554
No 102
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.23 E-value=2.1e-11 Score=105.70 Aligned_cols=103 Identities=16% Similarity=0.212 Sum_probs=70.0
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~ 84 (274)
.....+||||||+|+||+++|+++...|+ +|.+| +|++++ ..+.....+..+++++||+|++++| ....
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~-----~~~~~~~~sl~ell~~aDvVil~vP~t~~t 236 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGM----SVRYW-NRSTLS-----GVDWIAHQSPVDLARDSDVLAVCVAASAAT 236 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSCCT-----TSCCEECSSHHHHHHTCSEEEECC------
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-cCCccc-----ccCceecCCHHHHHhcCCEEEEeCCCCHHH
Confidence 34566899999999999999999999998 99999 998764 2345556788999999999999998 4556
Q ss_pred HHHH-HHhccccCCCCEEEEecCCCCH--HHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAGVKL--KDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g~~~--~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++.|-.. +.+.+.+.
T Consensus 237 ~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 237 QNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALK 273 (340)
T ss_dssp ----CHHHHHHTTTTCEEEECSCC-------------
T ss_pred HHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 6666 4566678899999998765332 34544444
No 103
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.22 E-value=1.9e-11 Score=105.23 Aligned_cols=106 Identities=17% Similarity=0.247 Sum_probs=80.8
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCccc-H
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-V 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~-~ 84 (274)
.....++|||||+|+||+++++.|...|+ +|++| +|++++. ...+.|+.. .+..++++++|+|++++|... .
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~-~~~~~g~~~-~~l~ell~~aDvVvl~~P~~~~t 210 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGM----KVLAY-DILDIRE-KAEKINAKA-VSLEELLKNSDVISLHVTVSKDA 210 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTC----EEEEE-CSSCCHH-HHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTS
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-CCCcchh-HHHhcCcee-cCHHHHHhhCCEEEEeccCChHH
Confidence 34566899999999999999999999998 99999 9988764 345578765 377888999999999998533 4
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 211 ~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 247 (313)
T 2ekl_A 211 KPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIK 247 (313)
T ss_dssp CCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHH
T ss_pred HHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 4444 3344567899999988765 33456666664
No 104
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.22 E-value=1.7e-11 Score=106.77 Aligned_cols=106 Identities=18% Similarity=0.182 Sum_probs=81.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cHH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~~ 85 (274)
....++|||||+|+||+.++++|...|+ +|++| +|++++. .....|+....+..+++++||+|++++|.. ..+
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~----~V~~~-d~~~~~~-~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~ 238 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGF----NVLFY-DPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNH 238 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCT
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCC----EEEEE-CCCcchh-hHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHH
Confidence 4566899999999999999999999998 99999 9886542 223467776667889999999999999864 455
Q ss_pred HHH-HHhccccCCCCEEEEecCCC--CHHHHHHhhC
Q 024016 86 DVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (274)
Q Consensus 86 ~v~-~~i~~~l~~~~~vis~~~g~--~~~~l~~~~~ 118 (274)
.++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 239 ~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 274 (347)
T 1mx3_A 239 HLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALK 274 (347)
T ss_dssp TSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHH
Confidence 555 44556788999999987653 3456666654
No 105
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.21 E-value=1.8e-11 Score=106.75 Aligned_cols=107 Identities=16% Similarity=0.191 Sum_probs=82.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~ 84 (274)
.....++|||||+|+||+++|+.+...|+ +|++| +|++. .+...+.|+....+..+++++||+|++++|. ...
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~-~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t 229 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGM----NVLVW-GRENS-KERARADGFAVAESKDALFEQSDVLSVHLRLNDET 229 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSHHH-HHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTT
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCC----EEEEE-CCCCC-HHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHH
Confidence 34456899999999999999999999998 99999 99863 3455567888777889999999999999984 344
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 230 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 266 (352)
T 3gg9_A 230 RSIITVADLTRMKPTALFVNTSRAELVEENGMVTALN 266 (352)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHH
T ss_pred HHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHH
Confidence 4444 3455668899999998754 33445555553
No 106
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.20 E-value=2.8e-11 Score=105.09 Aligned_cols=106 Identities=15% Similarity=0.194 Sum_probs=80.8
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~ 84 (274)
.....++|||||+|+||+.+|++|...|. +|.+| ||++...+... |+....+..+++++||+|++++|. ...
T Consensus 169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~~~~--g~~~~~~l~ell~~sDvV~l~~Plt~~T 241 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGRIGRAIATRARGFGL----AIHYH-NRTRLSHALEE--GAIYHDTLDSLLGASDIFLIAAPGRPEL 241 (345)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHTTTC----EEEEE-CSSCCCHHHHT--TCEECSSHHHHHHTCSEEEECSCCCGGG
T ss_pred cccCCCEEEEEEeChhHHHHHHHHHHCCC----EEEEE-CCCCcchhhhc--CCeEeCCHHHHHhhCCEEEEecCCCHHH
Confidence 34456899999999999999999999998 99999 99865443322 777667889999999999999984 444
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++-| +..+.+.+.+.
T Consensus 242 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 278 (345)
T 4g2n_A 242 KGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALR 278 (345)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 4444 3455567899999988744 34556666664
No 107
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.20 E-value=2.1e-11 Score=104.63 Aligned_cols=106 Identities=21% Similarity=0.267 Sum_probs=80.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
.....++|||||+|+||.++++.|...|+ +|++| +|++++ +...+.|+... +..+++++||+|++++|.. ..
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~-~~~~~~g~~~~-~l~ell~~aDvV~l~~p~~~~t 210 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGM----NILLY-DPYPNE-ERAKEVNGKFV-DLETLLKESDVVTIHVPLVEST 210 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCH-HHHHHTTCEEC-CHHHHHHHCSEEEECCCCSTTT
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCC----EEEEE-CCCCCh-hhHhhcCcccc-CHHHHHhhCCEEEEecCCChHH
Confidence 34556899999999999999999999998 99999 998876 44555787654 6788899999999999854 34
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 211 ~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~ 247 (307)
T 1wwk_A 211 YHLINEERLKLMKKTAILINTSRGPVVDTNALVKALK 247 (307)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHH
Confidence 4444 3445567899999988765 33445555553
No 108
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.19 E-value=1.5e-11 Score=106.70 Aligned_cols=105 Identities=19% Similarity=0.255 Sum_probs=80.3
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
.....++|||||+|+||+++++.|...|+ +|++| +|++++ +...+.|+... +..+++++||+|++|+|.. ..
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~----~V~~~-d~~~~~-~~~~~~g~~~~-~l~e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGV----KLYYW-SRHRKV-NVEKELKARYM-DIDELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTC----EEEEE-CSSCCH-HHHHHHTEEEC-CHHHHHHHCSEEEECCCCCTTT
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-CCCcch-hhhhhcCceec-CHHHHHhhCCEEEEcCCCChHH
Confidence 34567899999999999999999999998 99999 999876 44445677654 7778889999999999976 56
Q ss_pred HHHHH-HhccccCCCCEEEEecCCCC--HHHHHHhhC
Q 024016 85 KDVAM-QIRPLLSRKKLLVSVAAGVK--LKDLQEWTG 118 (274)
Q Consensus 85 ~~v~~-~i~~~l~~~~~vis~~~g~~--~~~l~~~~~ 118 (274)
+.++. ++.+.++++ ++|+++.|.. .+.+.+.+.
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~ 250 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIK 250 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHH
Confidence 65553 345567889 9998876543 334555553
No 109
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.19 E-value=3.7e-11 Score=104.09 Aligned_cols=106 Identities=13% Similarity=0.134 Sum_probs=81.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
.....++|||||+|+||..+|+.+...|+ +|++| +|++++ +...+.|+.. .+..+++++||+|++++|.. ..
T Consensus 161 ~~l~g~tvgIIGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t 233 (335)
T 2g76_A 161 TELNGKTLGILGLGRIGREVATRMQSFGM----KTIGY-DPIISP-EVSASFGVQQ-LPLEEIWPLCDFITVHTPLLPST 233 (335)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSSSCH-HHHHHTTCEE-CCHHHHGGGCSEEEECCCCCTTT
T ss_pred cCCCcCEEEEEeECHHHHHHHHHHHHCCC----EEEEE-CCCcch-hhhhhcCcee-CCHHHHHhcCCEEEEecCCCHHH
Confidence 34566899999999999999999999998 99999 998765 3445577765 47788999999999999854 45
Q ss_pred HHHH-HHhccccCCCCEEEEecCCC--CHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g~--~~~~l~~~~~ 118 (274)
+.++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 234 ~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~ 270 (335)
T 2g76_A 234 TGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQ 270 (335)
T ss_dssp TTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHH
Confidence 5555 34566788999999887653 3345665554
No 110
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.18 E-value=1.7e-11 Score=106.16 Aligned_cols=106 Identities=14% Similarity=0.234 Sum_probs=81.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccHH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~~ 85 (274)
....++|||||+|+||+++|+.|...|+ +|++| +|++.+.+.....|+... +..+++++||+|++++|. ....
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~ 215 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGA----TLQYH-EAKALDTQTEQRLGLRQV-ACSELFASSDFILLALPLNADTL 215 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCC----EEEEE-CSSCCCHHHHHHHTEEEC-CHHHHHHHCSEEEECCCCSTTTT
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-CCCCCcHhHHHhcCceeC-CHHHHHhhCCEEEEcCCCCHHHH
Confidence 4456899999999999999999999998 99999 998755555555677654 788899999999999984 3444
Q ss_pred HHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 86 DVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 86 ~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 216 ~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 251 (330)
T 4e5n_A 216 HLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALE 251 (330)
T ss_dssp TCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 444 3566678899999988754 34456666554
No 111
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.17 E-value=4.4e-11 Score=102.98 Aligned_cols=89 Identities=17% Similarity=0.193 Sum_probs=72.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cC--ceeccCchhhccCCCEEEEeeCcccH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IG--VKVLSDNNAVVEYSDVVVFSVKPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~-~g--~~~~~~~~~~~~~aDiIil~v~~~~~ 84 (274)
+.++|+|||+|.||.+++.+|.+. |+ .+|.+| ||++++.+.+.+ .+ +..++++.++++++|+|++|+|..
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~---~~V~v~-dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~-- 207 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSF---KEVRIW-NRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT-- 207 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCC---SEEEEE-CSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS--
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCC---cEEEEE-cCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC--
Confidence 457999999999999999999886 64 389999 999999998887 46 777788889999999999999852
Q ss_pred HHHHHHhccccCCCCEEEEec
Q 024016 85 KDVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~ 105 (274)
.+++.. +.+++|++|+++.
T Consensus 208 ~~v~~~--~~l~~g~~vi~~g 226 (312)
T 2i99_A 208 EPILFG--EWVKPGAHINAVG 226 (312)
T ss_dssp SCCBCG--GGSCTTCEEEECC
T ss_pred CcccCH--HHcCCCcEEEeCC
Confidence 333322 4678899888763
No 112
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.17 E-value=1.4e-11 Score=104.63 Aligned_cols=101 Identities=14% Similarity=0.175 Sum_probs=78.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVKD 86 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~~~ 86 (274)
...+||||||+|+||+++|+.|...|+ +|++| +|++++.+ .....++..+++++||+|++++|. ...+.
T Consensus 120 l~g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~-----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~ 189 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVAHLAKAFGM----RVIAY-TRSSVDQN-----VDVISESPADLFRQSDFVLIAIPLTDKTRG 189 (290)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTC----EEEEE-CSSCCCTT-----CSEECSSHHHHHHHCSEEEECCCCCTTTTT
T ss_pred eecchheeeccCchhHHHHHHHHhhCc----EEEEE-eccccccc-----cccccCChHHHhhccCeEEEEeeccccchh
Confidence 456899999999999999999999999 99999 99876543 244556888999999999999984 45555
Q ss_pred HH-HHhccccCCCCEEEEecCCC--CHHHHHHhhC
Q 024016 87 VA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (274)
Q Consensus 87 v~-~~i~~~l~~~~~vis~~~g~--~~~~l~~~~~ 118 (274)
++ .+..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 190 li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~ 224 (290)
T 3gvx_A 190 MVNSRLLANARKNLTIVNVARADVVSKPDMIGFLK 224 (290)
T ss_dssp CBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hhhHHHHhhhhcCceEEEeehhcccCCcchhhhhh
Confidence 54 45566789999999987543 3455655553
No 113
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.15 E-value=6.1e-11 Score=99.62 Aligned_cols=118 Identities=11% Similarity=0.115 Sum_probs=83.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHH-
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVK- 85 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~- 85 (274)
.+. +|+|||+|.||.+++..|.+.|+ +|++| +|++++++.+.+ .|.. ..+..++ +++|+||+|+|+....
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~----~v~v~-~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~ 186 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL----EVWVW-NRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDP 186 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC----CEEEE-CSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCT
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCC
Confidence 345 89999999999999999999998 89999 999998888776 5655 4566777 8999999999977432
Q ss_pred --HHHHHhccccCCCCEEEEecCCCCHHHHHHhhCCCceEEEcCCcHHhhcCC
Q 024016 86 --DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEA 136 (274)
Q Consensus 86 --~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~~~~~~~~~~p~~~~~~~~g 136 (274)
.++. .+.++++++++++..+.....+.+.... ...+++++.+..++++
T Consensus 187 ~~~~l~--~~~l~~g~~viD~~~~p~~t~l~~~a~~-~g~~~v~g~~mlv~q~ 236 (263)
T 2d5c_A 187 SASPLP--AELFPEEGAAVDLVYRPLWTRFLREAKA-KGLKVQTGLPMLAWQG 236 (263)
T ss_dssp TCCSSC--GGGSCSSSEEEESCCSSSSCHHHHHHHH-TTCEEECSHHHHHHHH
T ss_pred CCCCCC--HHHcCCCCEEEEeecCCcccHHHHHHHH-CcCEEECcHHHHHHHH
Confidence 2221 3457789999987543211123333321 2235667776655544
No 114
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=99.15 E-value=1.9e-10 Score=98.92 Aligned_cols=95 Identities=22% Similarity=0.311 Sum_probs=72.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c---------Ccee-ccCchhhccCCCEEEEee
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I---------GVKV-LSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~---------g~~~-~~~~~~~~~~aDiIil~v 79 (274)
|||+|||+|.||.+++..|.++|. ..+|++| ||++++++.+.. . .+.+ .++. +.+++||+||+|+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~--~~~V~l~-d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav 77 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV--ADDYVFI-DANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTL 77 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--CSEEEEE-CSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--CCEEEEE-cCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEec
Confidence 699999999999999999999992 1289999 999988766553 1 2344 3455 7788999999999
Q ss_pred Cccc--------------------HHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 80 KPQV--------------------VKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 80 ~~~~--------------------~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
++.. ++++++.+.++. ++.+++..++++..
T Consensus 78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDV 127 (309)
T ss_dssp SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHH
T ss_pred CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHH
Confidence 8644 467777777654 66777778787654
No 115
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.14 E-value=7.4e-11 Score=102.21 Aligned_cols=105 Identities=17% Similarity=0.193 Sum_probs=79.8
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~ 84 (274)
.....++|||||+|+||+++|+.|...|+ +|++| +|+++.... +.|+... +..+++++||+|++++|. ...
T Consensus 137 ~~l~g~tvgIiG~G~IG~~vA~~l~~~G~----~V~~~-d~~~~~~~~--~~g~~~~-~l~ell~~aDvV~l~~P~t~~t 208 (334)
T 2pi1_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGM----KVLCY-DVVKREDLK--EKGCVYT-SLDELLKESDVISLHVPYTKET 208 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCHHHH--HTTCEEC-CHHHHHHHCSEEEECCCCCTTT
T ss_pred eeccCceEEEECcCHHHHHHHHHHHHCcC----EEEEE-CCCcchhhH--hcCceec-CHHHHHhhCCEEEEeCCCChHH
Confidence 34456899999999999999999999998 99999 998765422 4577654 588899999999999984 344
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
..++ .+....++++.++|+++-| +..+.+.+.+.
T Consensus 209 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 245 (334)
T 2pi1_A 209 HHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 4444 3455667899999988644 34566666664
No 116
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.13 E-value=1.7e-10 Score=100.73 Aligned_cols=106 Identities=16% Similarity=0.190 Sum_probs=79.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~ 84 (274)
.....++|||||+|+||+.+|+.+..-|+ +|.+| +|++ +.+...+.|+.. .+..+++++||+|++++|. ...
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~----~V~~~-d~~~-~~~~~~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T 244 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRA----RIRVF-DPWL-PRSMLEENGVEP-ASLEDVLTKSDFIFVVAAVTSEN 244 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCC----EEEEE-CSSS-CHHHHHHTTCEE-CCHHHHHHSCSEEEECSCSSCC-
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCC----EEEEE-CCCC-CHHHHhhcCeee-CCHHHHHhcCCEEEEcCcCCHHH
Confidence 34456899999999999999999999998 99999 9985 334445577765 4788999999999999984 455
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++-| +..+.+.+.+.
T Consensus 245 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 281 (365)
T 4hy3_A 245 KRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVS 281 (365)
T ss_dssp --CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHH
T ss_pred HhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHH
Confidence 5555 4456678999999998744 34556666664
No 117
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=99.12 E-value=6.1e-10 Score=83.82 Aligned_cols=96 Identities=15% Similarity=0.190 Sum_probs=69.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceec-cC---ch----hhccCCCEEEEee
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVL-SD---NN----AVVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~-~~---~~----~~~~~aDiIil~v 79 (274)
+.|+|.|+|+|.+|..+++.|.+.|+ +|+++ +|++++.+.+.+ .++... .+ .. ..++++|+||+|+
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~----~v~~~-d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGH----DIVLI-DIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 35799999999999999999999998 99999 999998888775 465432 22 11 1256899999999
Q ss_pred CcccHHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 80 KPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 80 ~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
|++.....+..+...+.++++++. +++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~-~~~~~~ 107 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGINKTIAR-ISEIEY 107 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEE-CSSTTH
T ss_pred CCchHHHHHHHHHHHcCCCEEEEE-ecCHhH
Confidence 887665555555555666666554 444443
No 118
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=99.11 E-value=2.5e-11 Score=101.23 Aligned_cols=136 Identities=14% Similarity=0.132 Sum_probs=93.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
.. +|+|||+|.||.+++..|.+.|. .+|+++ +|++++++.+.+ .+.....+..+.++++|+||.|||.....+.
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~---~~I~v~-nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~ 182 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGV---KDIWVV-NRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEE 182 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTC---CCEEEE-ESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCC
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCC---CEEEEE-eCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCC
Confidence 45 89999999999999999999986 379999 999999888765 3333445566778899999999974321110
Q ss_pred HHHh-ccccCCCCEEEEecCCCCHHHHHHhhC-CCceEEEcCCcHHhhcCCceEEecCCCCCHHHHHH
Q 024016 88 AMQI-RPLLSRKKLLVSVAAGVKLKDLQEWTG-HSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGEL 153 (274)
Q Consensus 88 ~~~i-~~~l~~~~~vis~~~g~~~~~l~~~~~-~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~ 153 (274)
..+ ...++++++|+++..+ +...+++... +.+ +.+|+.+..+.+|...+......+++.+++
T Consensus 183 -~~i~~~~l~~~~~V~Divy~-~T~ll~~A~~~G~~--~~~~Gl~MLv~Qa~~af~~wtg~~~~~~~~ 246 (253)
T 3u62_A 183 -LPVSDDSLKNLSLVYDVIYF-DTPLVVKARKLGVK--HIIKGNLMFYYQAMENLKIWGIYDEEVFKE 246 (253)
T ss_dssp -CSCCHHHHTTCSEEEECSSS-CCHHHHHHHHHTCS--EEECTHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred -CCCCHHHhCcCCEEEEeeCC-CcHHHHHHHHCCCc--EEECCHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 011 1235688999999877 6666654443 322 478999988888765433222235555433
No 119
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.10 E-value=4.1e-10 Score=96.09 Aligned_cols=116 Identities=15% Similarity=0.252 Sum_probs=82.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec--cCchhhccCCCEEEEeeCcccH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL--SDNNAVVEYSDVVVFSVKPQVV 84 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~--~~~~~~~~~aDiIil~v~~~~~ 84 (274)
....++|+|||+|+||..+++.|...|. +|++| +|++++.+.+.+.|+... .+..++++++|+|++++|...+
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~----~V~~~-dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i 226 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA----KVKVG-ARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALVV 226 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCCB
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHHh
Confidence 4456899999999999999999999998 99999 999988777766777643 4566778999999999997654
Q ss_pred HHHHHHhccccCCCCEEEEecCC---CCHHHHHHhhCCCceEEEcCCcHHhh
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAAG---VKLKDLQEWTGHSRFIRVMPNTPSAV 133 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~g---~~~~~l~~~~~~~~~~~~~p~~~~~~ 133 (274)
.+ +....++++.++|++..+ +..+ ..+.. +. .+..+|+.|..+
T Consensus 227 ~~---~~l~~mk~~~~lin~ar~~~~~~~~-~a~~~-Gv-~~~~~~~l~~~v 272 (293)
T 3d4o_A 227 TA---NVLAEMPSHTFVIDLASKPGGTDFR-YAEKR-GI-KALLVPGLPGIV 272 (293)
T ss_dssp CH---HHHHHSCTTCEEEECSSTTCSBCHH-HHHHH-TC-EEEECCCHHHHH
T ss_pred CH---HHHHhcCCCCEEEEecCCCCCCCHH-HHHHC-CC-EEEECCCCCccc
Confidence 22 122346788999988742 2231 11112 22 233567777654
No 120
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.10 E-value=4.5e-10 Score=96.15 Aligned_cols=94 Identities=13% Similarity=0.243 Sum_probs=75.1
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee--ccCchhhccCCCEEEEeeCccc
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV--LSDNNAVVEYSDVVVFSVKPQV 83 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~--~~~~~~~~~~aDiIil~v~~~~ 83 (274)
.....++|+|||+|+||..+++.|...|. +|++| +|++++.+.+.+.|+.. ..+..++++++|+|++++|+..
T Consensus 153 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~----~V~~~-d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~ 227 (300)
T 2rir_A 153 YTIHGSQVAVLGLGRTGMTIARTFAALGA----NVKVG-ARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMI 227 (300)
T ss_dssp SCSTTSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCC
T ss_pred CCCCCCEEEEEcccHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhh
Confidence 34456899999999999999999999998 99999 99998877776677654 2466778899999999999865
Q ss_pred HHHHHHHhccccCCCCEEEEecCC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~g 107 (274)
+.+ +....++++.++|++..+
T Consensus 228 i~~---~~~~~mk~g~~lin~a~g 248 (300)
T 2rir_A 228 LNQ---TVLSSMTPKTLILDLASR 248 (300)
T ss_dssp BCH---HHHTTSCTTCEEEECSST
T ss_pred hCH---HHHHhCCCCCEEEEEeCC
Confidence 432 223457889999988654
No 121
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.10 E-value=5.2e-11 Score=101.89 Aligned_cols=101 Identities=11% Similarity=0.141 Sum_probs=77.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cHH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~~ 85 (274)
....++|||||+|+||+++|++|...|+ +|++| +|+++ +. +.....+..+++++||+|++++|.. ..+
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~-dr~~~--~~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~ 189 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGA----QVRGF-SRTPK--EG----PWRFTNSLEEALREARAAVCALPLNKHTR 189 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTC----EEEEE-CSSCC--CS----SSCCBSCSHHHHTTCSEEEECCCCSTTTT
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-CCCcc--cc----CcccCCCHHHHHhhCCEEEEeCcCchHHH
Confidence 3456899999999999999999999998 99999 99876 11 3434457888999999999999865 456
Q ss_pred HHHH-HhccccCCCCEEEEecCCC--CHHHHHHhhC
Q 024016 86 DVAM-QIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (274)
Q Consensus 86 ~v~~-~i~~~l~~~~~vis~~~g~--~~~~l~~~~~ 118 (274)
.++. +..+.++++.++|+++.|- ..+.+.+.+.
T Consensus 190 ~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~ 225 (303)
T 1qp8_A 190 GLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILK 225 (303)
T ss_dssp TCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 6653 5666789999999887652 3345655554
No 122
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.09 E-value=1.2e-10 Score=100.94 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=77.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cHH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~~ 85 (274)
....++|||||+|+||..+++.+...|+ +|++| +|++++. +.+ .+....+..+++++||+|++++|.. ..+
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~--~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~ 214 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGA----KVITY-DIFRNPE--LEK-KGYYVDSLDDLYKQADVISLHVPDVPANV 214 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCHH--HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGT
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-CCCcchh--HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHH
Confidence 3456899999999999999999999998 99999 9987654 222 2444447788899999999999843 355
Q ss_pred HHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 86 DVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 86 ~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 215 ~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 215 HMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp TCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 444 2344567899999988654 34456666664
No 123
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.08 E-value=4.4e-11 Score=103.13 Aligned_cols=106 Identities=12% Similarity=0.210 Sum_probs=78.8
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~ 84 (274)
.....++|||||+|+||+.+|+.|...|+ +|++| +|+++..+.+.. .....+..+++++||+|++++|. ...
T Consensus 133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~lPlt~~t 205 (324)
T 3evt_A 133 STLTGQQLLIYGTGQIGQSLAAKASALGM----HVIGV-NTTGHPADHFHE--TVAFTATADALATANFIVNALPLTPTT 205 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESSCCCCTTCSE--EEEGGGCHHHHHHCSEEEECCCCCGGG
T ss_pred ccccCCeEEEECcCHHHHHHHHHHHhCCC----EEEEE-CCCcchhHhHhh--ccccCCHHHHHhhCCEEEEcCCCchHH
Confidence 34556899999999999999999999999 99999 998765432211 12345778899999999999984 445
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++-| +..+.+.+.+.
T Consensus 206 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~ 242 (324)
T 3evt_A 206 HHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALD 242 (324)
T ss_dssp TTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHH
Confidence 5544 3455668899999988744 34556666554
No 124
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.07 E-value=5.8e-11 Score=102.04 Aligned_cols=101 Identities=18% Similarity=0.255 Sum_probs=77.6
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
.....++|||||+|+||..++++|...|+ +|++| +|++++.+ +. ..+..+++++||+|++++|.. ..
T Consensus 140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~~------~~-~~~l~ell~~aDvV~l~~p~~~~t 207 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRIGQAVAKRALAFGM----RVVYH-ARTPKPLP------YP-FLSLEELLKEADVVSLHTPLTPET 207 (311)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCSSS------SC-BCCHHHHHHHCSEEEECCCCCTTT
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHCCC----EEEEE-CCCCcccc------cc-cCCHHHHHhhCCEEEEeCCCChHH
Confidence 34566899999999999999999999998 99999 99876543 22 356778899999999999865 45
Q ss_pred HHHHH-HhccccCCCCEEEEecCCC--CHHHHHHhhC
Q 024016 85 KDVAM-QIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~~-~i~~~l~~~~~vis~~~g~--~~~~l~~~~~ 118 (274)
+.++. +....++++.++|+++.|- ..+.+.+.+.
T Consensus 208 ~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 208 HRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred HhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence 55553 4556688999999887653 3345666565
No 125
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=99.06 E-value=7.6e-11 Score=89.83 Aligned_cols=88 Identities=17% Similarity=0.298 Sum_probs=68.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCce--eccCchhhccCCCEEEEeeCcccHHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVK--VLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~--~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
.+||+|||+|.||..++..|.+.|+ +|++| +|++++.+.+.+ .+.. ..++..+.++++|+||.|+|....
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~----~v~v~-~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~-- 93 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQY----KVTVA-GRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTP-- 93 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTC----EEEEE-ESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-cCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCc--
Confidence 4699999999999999999999888 79999 999999888765 5654 345667788899999999986521
Q ss_pred HHHHhccccCCCCEEEEecC
Q 024016 87 VAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~ 106 (274)
++. ...++++.+++++..
T Consensus 94 ~~~--~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 94 IVE--ERSLMPGKLFIDLGN 111 (144)
T ss_dssp SBC--GGGCCTTCEEEECCS
T ss_pred Eee--HHHcCCCCEEEEccC
Confidence 111 134677888887644
No 126
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.06 E-value=5.5e-11 Score=102.41 Aligned_cols=106 Identities=18% Similarity=0.187 Sum_probs=78.1
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~ 84 (274)
.....++|||||+|+||+++|+.|...|+ +|++| +|+++..+.+ .+.....+..+++++||+|++++|. ...
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~~~--~~~~~~~~l~ell~~aDvV~l~lPlt~~T 208 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGM----KVLGV-SRSGRERAGF--DQVYQLPALNKMLAQADVIVSVLPATRET 208 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCCCTTC--SEEECGGGHHHHHHTCSEEEECCCCCSSS
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCC----EEEEE-cCChHHhhhh--hcccccCCHHHHHhhCCEEEEeCCCCHHH
Confidence 34456899999999999999999999999 99999 9987433221 1122345778899999999999984 445
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 209 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 245 (324)
T 3hg7_A 209 HHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALR 245 (324)
T ss_dssp TTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHH
Confidence 5554 3455668899999998754 33456665554
No 127
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.06 E-value=2.8e-11 Score=104.02 Aligned_cols=106 Identities=18% Similarity=0.222 Sum_probs=78.2
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~ 84 (274)
.....++|||||+|+||+.+|+.|...|+ +|++| +|+++..+.+... ....+..+++++||+|++++| ....
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~----~V~~~-dr~~~~~~~~~~~--~~~~~l~ell~~aDiV~l~~Plt~~t 207 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGF----PLRCW-SRSRKSWPGVESY--VGREELRAFLNQTRVLINLLPNTAQT 207 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTC----CEEEE-ESSCCCCTTCEEE--ESHHHHHHHHHTCSEEEECCCCCGGG
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-cCCchhhhhhhhh--cccCCHHHHHhhCCEEEEecCCchhh
Confidence 34456899999999999999999999998 99999 9987643221110 112467888999999999998 4456
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 208 ~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~ 244 (315)
T 3pp8_A 208 VGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALD 244 (315)
T ss_dssp TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHH
Confidence 5555 4556678899999988754 34456666554
No 128
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.06 E-value=3.3e-10 Score=85.65 Aligned_cols=96 Identities=23% Similarity=0.317 Sum_probs=73.2
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccH
Q 024016 9 ESFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG~----G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~ 84 (274)
+..+|+|||+ |+||..++++|.+.|| +|+.+ |++.+.. .|+.++.+..++.+.+|++++++|++.+
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~----~V~~v-np~~~~i-----~G~~~~~s~~el~~~vDlvii~vp~~~v 82 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGF----EVLPV-NPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPPKVG 82 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTC----EEEEE-CTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCHHHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCC----EEEEe-CCCCCeE-----CCeeecCCHHHhCCCCCEEEEEeCHHHH
Confidence 3468999999 9999999999999999 87777 7664322 5888888999988899999999999999
Q ss_pred HHHHHHhccccCCCCEEEEecCCCCHHHHHHhh
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT 117 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~ 117 (274)
.+++.++.. ...+.+++. +++.. +++.+..
T Consensus 83 ~~v~~~~~~-~g~~~i~~~-~~~~~-~~l~~~a 112 (138)
T 1y81_A 83 LQVAKEAVE-AGFKKLWFQ-PGAES-EEIRRFL 112 (138)
T ss_dssp HHHHHHHHH-TTCCEEEEC-TTSCC-HHHHHHH
T ss_pred HHHHHHHHH-cCCCEEEEc-CccHH-HHHHHHH
Confidence 999988765 344555553 34443 4444433
No 129
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=99.03 E-value=1.1e-09 Score=94.11 Aligned_cols=89 Identities=12% Similarity=0.175 Sum_probs=68.8
Q ss_pred CCCCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCc
Q 024016 6 IPAESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKP 81 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~-~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~ 81 (274)
+.|+++||||||+|+||.. ++..|.+. ++ ++. ++ +|++++++.+.+ .|+..+++..++++++|+|++|+|+
T Consensus 2 ~~M~~~~igiIG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~ 76 (308)
T 3uuw_A 2 NAMKNIKMGMIGLGSIAQKAYLPILTKSERF----EFVGAF-TPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSST 76 (308)
T ss_dssp ---CCCEEEEECCSHHHHHHTHHHHTSCSSS----EEEEEE-CSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCG
T ss_pred CccccCcEEEEecCHHHHHHHHHHHHhCCCe----EEEEEE-CCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCc
Confidence 3567789999999999996 88888763 44 666 67 999999988876 6876678888988899999999999
Q ss_pred ccHHHHHHHhccccCCCCEEE
Q 024016 82 QVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vi 102 (274)
....+++.... ..|+-|+
T Consensus 77 ~~h~~~~~~al---~~gk~vl 94 (308)
T 3uuw_A 77 ETHYEIIKILL---NLGVHVY 94 (308)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HhHHHHHHHHH---HCCCcEE
Confidence 98777766543 3444444
No 130
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.03 E-value=3e-10 Score=100.77 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=79.1
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
.....++|||||+|+||+.+|+++...|+ +|++| ||+++.. ..++....+..+++++||+|++++|.. ..
T Consensus 141 ~el~gktlGiIGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 141 FEARGKKLGIIGYGHIGTQLGILAESLGM----YVYFY-DIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPST 211 (404)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTTT
T ss_pred cccCCCEEEEEeECHHHHHHHHHHHHCCC----EEEEE-cCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChHH
Confidence 44567899999999999999999999998 99999 9976431 123555567889999999999999854 45
Q ss_pred HHHH-HHhccccCCCCEEEEecCCC--CHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g~--~~~~l~~~~~ 118 (274)
+.++ .+....+++|.++|+++.|- ..+.+.+.+.
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~ 248 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALA 248 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHH
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHH
Confidence 5555 33555688999999887553 3456666664
No 131
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=99.03 E-value=1e-09 Score=84.64 Aligned_cols=101 Identities=12% Similarity=0.087 Sum_probs=71.3
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH-HcCceec-cC---c---hhh-ccCCCE
Q 024016 4 FPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE-SIGVKVL-SD---N---NAV-VEYSDV 74 (274)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~-~~g~~~~-~~---~---~~~-~~~aDi 74 (274)
||.....++|.|+|+|.+|..+++.|.+.|+ +|+++ +|++++.+.+. +.|.... .+ . .+. +.++|+
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~----~V~vi-d~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGH----SVVVV-DKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADM 87 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSE
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCE
Confidence 5666667899999999999999999999998 99999 99999888776 5665432 22 1 112 567999
Q ss_pred EEEeeCcccHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 75 Iil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
||+|++++.....+..+...+.+...++...++..
T Consensus 88 Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 88 VFAFTNDDSTNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp EEECSSCHHHHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred EEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 99999987665555444444445556666655544
No 132
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.02 E-value=2e-09 Score=92.80 Aligned_cols=113 Identities=17% Similarity=0.296 Sum_probs=77.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH--HHH-Hc------Cceec-cCchhhccCCCEEEEe
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD--AFE-SI------GVKVL-SDNNAVVEYSDVVVFS 78 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~--~l~-~~------g~~~~-~~~~~~~~~aDiIil~ 78 (274)
++|||+|||+|.||.+++..|..+|+. .+|+++ +|++++++ .+. .. ...+. .+..+.++++|+||++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~--~~V~l~-d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~ 82 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIA--REIVLE-DIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVIT 82 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCC--SEEEEE-CSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEEC
Confidence 357999999999999999999999863 379999 99987765 221 12 22222 2234567899999999
Q ss_pred eCccc----------------HHHHHHHhccccCCCCEEEEecCCCCHH-HHHH---hhCCCceEEE
Q 024016 79 VKPQV----------------VKDVAMQIRPLLSRKKLLVSVAAGVKLK-DLQE---WTGHSRFIRV 125 (274)
Q Consensus 79 v~~~~----------------~~~v~~~i~~~l~~~~~vis~~~g~~~~-~l~~---~~~~~~~~~~ 125 (274)
++... +++++..+.++ .++.+|++.++|+... .+.. .+|..+++..
T Consensus 83 v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~~~~~~~~~~~~~~~~vig~ 148 (319)
T 1lld_A 83 AGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDIATHVAQKLTGLPENQIFGS 148 (319)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHHHTCCTTSEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHHHHHHHHHhcCCCHHHEeec
Confidence 95322 33677777764 6888999999988754 3333 3444466654
No 133
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.02 E-value=2.1e-10 Score=99.58 Aligned_cols=103 Identities=15% Similarity=0.207 Sum_probs=76.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccHH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~~ 85 (274)
....++|||||+|+||+.+|+.+...|. +|++| +|+++.. .+.++... +..+++++||+|++++|. ...+
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~~~---~~~~~~~~-~l~ell~~aDvV~l~~Plt~~t~ 215 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGA----KVIAY-DVAYNPE---FEPFLTYT-DFDTVLKEADIVSLHTPLFPSTE 215 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCGG---GTTTCEEC-CHHHHHHHCSEEEECCCCCTTTT
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCC----EEEEE-CCChhhh---hhcccccc-CHHHHHhcCCEEEEcCCCCHHHH
Confidence 3456899999999999999999999998 99999 9987541 12344443 788999999999999984 3344
Q ss_pred HHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 86 DVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 86 ~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
.++ .+....++++.++|+++-| +..+.+.+.+.
T Consensus 216 ~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 251 (343)
T 2yq5_A 216 NMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQ 251 (343)
T ss_dssp TCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 433 3445567899999988744 34456665554
No 134
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.00 E-value=2.4e-09 Score=84.76 Aligned_cols=95 Identities=12% Similarity=0.119 Sum_probs=68.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHcCceec-cC---c---hhh--ccCCCEEE
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD---N---NAV--VEYSDVVV 76 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~---~---~~~--~~~aDiIi 76 (274)
.+..++|.|+|+|.||..+++.|.+. |+ +|+++ ++++++.+.+.+.|+.+. .+ . .++ ++++|+||
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~----~V~vi-d~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGK----ISLGI-EIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCS----CEEEE-ESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCC----eEEEE-ECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 34457999999999999999999999 99 99999 999999988887776532 12 1 233 56899999
Q ss_pred EeeCcccH-HHHHHHhccccCCCCEEEEecCC
Q 024016 77 FSVKPQVV-KDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 77 l~v~~~~~-~~v~~~i~~~l~~~~~vis~~~g 107 (274)
+|++++.. ..++..+. .+.++..++....+
T Consensus 111 ~~~~~~~~~~~~~~~~~-~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 111 LAMPHHQGNQTALEQLQ-RRNYKGQIAAIAEY 141 (183)
T ss_dssp ECCSSHHHHHHHHHHHH-HTTCCSEEEEEESS
T ss_pred EeCCChHHHHHHHHHHH-HHCCCCEEEEEECC
Confidence 99986543 33333333 34455556654443
No 135
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=99.00 E-value=5.7e-10 Score=85.10 Aligned_cols=95 Identities=15% Similarity=0.162 Sum_probs=73.3
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHHHcCceeccCchhhccCCCEEEEeeCccc
Q 024016 10 SFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNL--KRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV 83 (274)
Q Consensus 10 ~~~IgiIG~----G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~--~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~ 83 (274)
..+|+|||+ |+||..++++|.+.|| +|+.+ |++. +.. .|+.++.+..++.+..|++++|+|++.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~----~v~~v-np~~~g~~i-----~G~~~~~sl~el~~~~Dlvii~vp~~~ 82 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGY----HVIPV-SPKVAGKTL-----LGQQGYATLADVPEKVDMVDVFRNSEA 82 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTC----CEEEE-CSSSTTSEE-----TTEECCSSTTTCSSCCSEEECCSCSTH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCC----EEEEe-CCccccccc-----CCeeccCCHHHcCCCCCEEEEEeCHHH
Confidence 468999999 8999999999999999 78877 7665 322 588888888888889999999999999
Q ss_pred HHHHHHHhccccCCCCEEEEecCCCCHHHHHHhh
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT 117 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~ 117 (274)
+.+++.++.. ...+.+++. .++. .+++.+..
T Consensus 83 v~~v~~~~~~-~g~~~i~i~-~~~~-~~~l~~~a 113 (145)
T 2duw_A 83 AWGVAQEAIA-IGAKTLWLQ-LGVI-NEQAAVLA 113 (145)
T ss_dssp HHHHHHHHHH-HTCCEEECC-TTCC-CHHHHHHH
T ss_pred HHHHHHHHHH-cCCCEEEEc-CChH-HHHHHHHH
Confidence 9999988765 344555554 3444 44554444
No 136
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.99 E-value=2.2e-09 Score=93.94 Aligned_cols=86 Identities=9% Similarity=0.174 Sum_probs=69.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhcc--CCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKS--GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~--g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDiIil~v~~~ 82 (274)
+++||||||+|.||..++..|.+. ++ ++. ++ ++++++++.+.+ .|+..+++..++++ ++|+|++|+|+.
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~----~lvav~-d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 86 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRA----ELIDVC-DIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSG 86 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTE----EEEEEE-CSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGG
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCe----EEEEEE-cCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcH
Confidence 457999999999999999999987 45 655 77 999999888776 78888889988886 799999999998
Q ss_pred cHHHHHHHhccccCCCCEEE
Q 024016 83 VVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vi 102 (274)
...+++.... ..|+-|+
T Consensus 87 ~h~~~~~~al---~~gk~v~ 103 (354)
T 3q2i_A 87 LHPTQSIECS---EAGFHVM 103 (354)
T ss_dssp GHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHH---HCCCCEE
Confidence 8777665543 3444455
No 137
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.99 E-value=4.6e-10 Score=99.39 Aligned_cols=104 Identities=17% Similarity=0.209 Sum_probs=76.7
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~ 84 (274)
.+...++|||||+|+||+.+|+.+...|+ +|++| ||++... ..+.....+..+++++||+|++++|. ...
T Consensus 152 ~el~gktvGIIGlG~IG~~vA~~l~~~G~----~V~~y-d~~~~~~----~~~~~~~~sl~ell~~aDvV~lhvPlt~~T 222 (416)
T 3k5p_A 152 REVRGKTLGIVGYGNIGSQVGNLAESLGM----TVRYY-DTSDKLQ----YGNVKPAASLDELLKTSDVVSLHVPSSKST 222 (416)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CTTCCCC----BTTBEECSSHHHHHHHCSEEEECCCC----
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-CCcchhc----ccCcEecCCHHHHHhhCCEEEEeCCCCHHH
Confidence 34556899999999999999999999999 99999 9875321 12445557889999999999999985 344
Q ss_pred HHHH-HHhccccCCCCEEEEecCCC--CHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAGV--KLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g~--~~~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++-|- ..+.+.+.+.
T Consensus 223 ~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 223 SKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp -CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred hhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 4444 34455678999999987553 3456666664
No 138
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.99 E-value=5.1e-10 Score=97.04 Aligned_cols=104 Identities=11% Similarity=0.093 Sum_probs=77.4
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cH
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~ 84 (274)
.....++|||||+|+||+.+|+.+...|+ +|++| +|++++. + +..+.. .+..+++++||+|++++|.. ..
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~--~-~~~~~~-~~l~ell~~aDvV~~~~P~~~~t 211 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGA----KVIAY-DPYPMKG--D-HPDFDY-VSLEDLFKQSDVIDLHVPGIEQN 211 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCSS--C-CTTCEE-CCHHHHHHHCSEEEECCCCCGGG
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-CCCcchh--h-Hhcccc-CCHHHHHhcCCEEEEcCCCchhH
Confidence 34556899999999999999999999998 99999 9987543 1 122333 37788899999999999854 34
Q ss_pred HHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 85 KDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 85 ~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
+.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 212 ~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~ 248 (333)
T 1dxy_A 212 THIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLK 248 (333)
T ss_dssp TTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 4444 3455567899999988755 34456666665
No 139
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.98 E-value=3.4e-10 Score=99.13 Aligned_cols=103 Identities=16% Similarity=0.205 Sum_probs=75.2
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-c-
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-V- 83 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~- 83 (274)
.....++|||||+|+||+.+|+.|...|+ +|.+| ||+.+... .+. ...+..+++++||+|++++|.. .
T Consensus 115 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~----~V~~~-d~~~~~~~----~~~-~~~sl~ell~~aDiV~l~~Plt~~g 184 (381)
T 3oet_A 115 FSLRDRTIGIVGVGNVGSRLQTRLEALGI----RTLLC-DPPRAARG----DEG-DFRTLDELVQEADVLTFHTPLYKDG 184 (381)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CHHHHHTT----CCS-CBCCHHHHHHHCSEEEECCCCCCSS
T ss_pred CccCCCEEEEEeECHHHHHHHHHHHHCCC----EEEEE-CCChHHhc----cCc-ccCCHHHHHhhCCEEEEcCcCCccc
Confidence 34556899999999999999999999999 99999 87543321 222 3457889999999999999832 3
Q ss_pred ---HHHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 84 ---VKDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 84 ---~~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
.+.++ .+....+++|.++|+++-| +..+.+.+.+.
T Consensus 185 ~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~ 225 (381)
T 3oet_A 185 PYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLN 225 (381)
T ss_dssp TTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred cccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 33333 3344567899999988754 34456666554
No 140
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.98 E-value=3.3e-09 Score=91.48 Aligned_cols=96 Identities=18% Similarity=0.294 Sum_probs=71.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c------CceeccCchhhccCCCEEEEeeCc
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I------GVKVLSDNNAVVEYSDVVVFSVKP 81 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~---~------g~~~~~~~~~~~~~aDiIil~v~~ 81 (274)
|||+|||+|.||.+++..|.+.|+. .+|++| |+++++++.+.. . ...+..+..+.+++||+||+|++.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~--~~V~l~-D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~aDvViiav~~ 77 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFA--REMVLI-DVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGV 77 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CeEEEE-eCChHHHHHHHHHHHhhhhhcCCcEEEeCCHHHhCCCCEEEEccCC
Confidence 5899999999999999999999862 379999 999987766542 1 222222235668899999999974
Q ss_pred cc----------------HHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 82 QV----------------VKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 82 ~~----------------~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
.. ++++++.+.++ .|+..+|..++++..
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 78 PQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVVTNPVDV 121 (319)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcHHH
Confidence 32 46777777766 467777777777654
No 141
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.97 E-value=3.4e-09 Score=92.32 Aligned_cols=79 Identities=14% Similarity=0.246 Sum_probs=66.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhcc--CCCEEEEeeCccc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFSVKPQV 83 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDiIil~v~~~~ 83 (274)
+++||||||+|+||..++..|.+. ++ ++. ++ +|++++++.+.+ .|+..+++..++++ ++|+|++|+|+..
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 77 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDL----ELVVIA-DPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTST 77 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTE----EEEEEE-CSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGG
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCc----EEEEEE-CCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchh
Confidence 457999999999999999999886 44 665 67 999999888776 68888889999888 7999999999988
Q ss_pred HHHHHHHhc
Q 024016 84 VKDVAMQIR 92 (274)
Q Consensus 84 ~~~v~~~i~ 92 (274)
..+++....
T Consensus 78 h~~~~~~al 86 (344)
T 3euw_A 78 HVDLITRAV 86 (344)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 777766544
No 142
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.95 E-value=3.4e-09 Score=92.63 Aligned_cols=90 Identities=17% Similarity=0.202 Sum_probs=68.6
Q ss_pred CCCCCCCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhcc--CCCEEEEe
Q 024016 5 PIPAESFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFS 78 (274)
Q Consensus 5 ~~~~~~~~IgiIG~G~mG~-~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDiIil~ 78 (274)
|.+|+++||||||+|.||. .++..|.+. ++ ++. ++ +|++++++.+.+ .|+..+++..++++ +.|+|++|
T Consensus 22 ~~~m~~~rigiIG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~ 96 (350)
T 3rc1_A 22 PANANPIRVGVIGCADIAWRRALPALEAEPLT----EVTAIA-SRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVP 96 (350)
T ss_dssp ----CCEEEEEESCCHHHHHTHHHHHHHCTTE----EEEEEE-ESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEEC
T ss_pred CCCCCceEEEEEcCcHHHHHHHHHHHHhCCCe----EEEEEE-cCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEC
Confidence 4556678999999999998 799999886 44 665 66 999999988876 68887788888886 58999999
Q ss_pred eCcccHHHHHHHhccccCCCCEEE
Q 024016 79 VKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 79 v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+|+....+++.... ..|+-|+
T Consensus 97 tp~~~h~~~~~~al---~aGk~Vl 117 (350)
T 3rc1_A 97 LPAVLHAEWIDRAL---RAGKHVL 117 (350)
T ss_dssp CCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HCCCcEE
Confidence 99988777765543 3444444
No 143
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.94 E-value=9.2e-10 Score=96.00 Aligned_cols=91 Identities=16% Similarity=0.207 Sum_probs=69.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHc-----C--ceeccCchhhccCCCEEEEeeC
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESI-----G--VKVLSDNNAVVEYSDVVVFSVK 80 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~~-----g--~~~~~~~~~~~~~aDiIil~v~ 80 (274)
+.++|+|||+|.||..++..|... +. .+|.+| ||++++++++.+. | +..+++..++++++|+|++|||
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~---~~V~V~-~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTp 203 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGI---EEIVAY-DTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTA 203 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCC---CEEEEE-CSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCC---cEEEEE-cCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEecc
Confidence 457999999999999999998653 22 389999 9999999988862 6 3456788888999999999999
Q ss_pred cccHHHHHHHhccccCCCCEEEEec
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vis~~ 105 (274)
......++. ...+++|+.|+.+.
T Consensus 204 s~~~~pvl~--~~~l~~G~~V~~vg 226 (350)
T 1x7d_A 204 DKAYATIIT--PDMLEPGMHLNAVG 226 (350)
T ss_dssp CSSEEEEEC--GGGCCTTCEEEECS
T ss_pred CCCCCceec--HHHcCCCCEEEECC
Confidence 763222222 14577888777653
No 144
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.94 E-value=6.5e-10 Score=96.31 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=76.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc-cHH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ-VVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~-~~~ 85 (274)
....++|||||+|+||+.+++.+...|+ +|++| +|++++. + +..+.. .+..+++++||+|++++|.. ..+
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~----~V~~~-d~~~~~~--~-~~~~~~-~~l~ell~~aDvV~~~~p~t~~t~ 213 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGA----TVIGE-DVFEIKG--I-EDYCTQ-VSLDEVLEKSDIITIHAPYIKENG 213 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCCS--C-TTTCEE-CCHHHHHHHCSEEEECCCCCTTTC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-CCCccHH--H-Hhcccc-CCHHHHHhhCCEEEEecCCchHHH
Confidence 3456899999999999999999999998 99999 9987643 2 222333 47788899999999999853 344
Q ss_pred HHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 86 DVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 86 ~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
.++ .+....++++.++|+++.| +..+.+.+.+.
T Consensus 214 ~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 249 (331)
T 1xdw_A 214 AVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVE 249 (331)
T ss_dssp CSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHH
Confidence 444 3344567899999988754 34456666664
No 145
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.93 E-value=8.6e-10 Score=96.79 Aligned_cols=102 Identities=14% Similarity=0.183 Sum_probs=76.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCccc---
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV--- 83 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~--- 83 (274)
....++|||||+|+||+.+|+.|...|+ +|++| +|+++.. ..|.. ..+..+++++||+|++++|...
T Consensus 113 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~----~V~~~-d~~~~~~----~~g~~-~~~l~ell~~aDvV~l~~Plt~~g~ 182 (380)
T 2o4c_A 113 DLAERTYGVVGAGQVGGRLVEVLRGLGW----KVLVC-DPPRQAR----EPDGE-FVSLERLLAEADVISLHTPLNRDGE 182 (380)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CHHHHHH----STTSC-CCCHHHHHHHCSEEEECCCCCSSSS
T ss_pred ccCCCEEEEEeCCHHHHHHHHHHHHCCC----EEEEE-cCChhhh----ccCcc-cCCHHHHHHhCCEEEEeccCccccc
Confidence 3456899999999999999999999998 99999 8876432 23433 3577888999999999998433
Q ss_pred --HHHHH-HHhccccCCCCEEEEecCC--CCHHHHHHhhC
Q 024016 84 --VKDVA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTG 118 (274)
Q Consensus 84 --~~~v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~ 118 (274)
...++ .+..+.++++.++|+++.| +..+.+.+.+.
T Consensus 183 ~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~ 222 (380)
T 2o4c_A 183 HPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLE 222 (380)
T ss_dssp SCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred cchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 44444 3455668899999988755 33455666554
No 146
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.92 E-value=5.6e-09 Score=91.32 Aligned_cols=98 Identities=19% Similarity=0.223 Sum_probs=72.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhc--cCCCEEEEeeCccc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVV--EYSDVVVFSVKPQV 83 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~--~~aDiIil~v~~~~ 83 (274)
+++||||||+|.||..++..|.+. ++ ++. ++ +|++++++.+.+ .|+..+++..+++ .+.|+|++|+|+..
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~----~lvav~-d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 78 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKL----KLVTCY-SRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDK 78 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSE----EEEEEE-CSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTS
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCc----EEEEEE-CCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHH
Confidence 457999999999999999999876 55 655 67 999999988876 6887788888888 56999999999887
Q ss_pred HHHHHHHhccccCCCCEEE-EecCCCCHHHHH
Q 024016 84 VKDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQ 114 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vi-s~~~g~~~~~l~ 114 (274)
..+++.... ..|+-|+ .-.-+.+.+..+
T Consensus 79 h~~~~~~al---~~gk~vl~EKP~~~~~~~~~ 107 (354)
T 3db2_A 79 HAEVIEQCA---RSGKHIYVEKPISVSLDHAQ 107 (354)
T ss_dssp HHHHHHHHH---HTTCEEEEESSSCSSHHHHH
T ss_pred HHHHHHHHH---HcCCEEEEccCCCCCHHHHH
Confidence 766665543 2444444 222234444443
No 147
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.92 E-value=1.2e-08 Score=77.18 Aligned_cols=100 Identities=12% Similarity=0.188 Sum_probs=67.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cCc--hhh-----ccCCCEEEEeeC
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN--NAV-----VEYSDVVVFSVK 80 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~~--~~~-----~~~aDiIil~v~ 80 (274)
++++|.|+|+|.+|..+++.|.+.|+ +|+++ ++++++.+.+.+.|..+. .+. .+. +.++|+||++++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~----~V~~i-d~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK----KVLAV-DKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC----CEEEE-ESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----eEEEE-ECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 35689999999999999999999999 99999 999999988887776432 121 111 458999999998
Q ss_pred cccHHHHHHHhccccCCCCEEEEecCCCCHHHH
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDL 113 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l 113 (274)
++.....+......+....+++...+....+.+
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~~~~~~~~~l 112 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRVSSPKKKEEF 112 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEESCGGGHHHH
T ss_pred CHHHHHHHHHHHHHhCCceEEEEEcChhHHHHH
Confidence 665443333333333344444444333333444
No 148
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.91 E-value=4.8e-09 Score=76.42 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=68.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHHcCceec-------cCchhhccCCCEEEEeeCc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFESIGVKVL-------SDNNAVVEYSDVVVFSVKP 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g-~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-------~~~~~~~~~aDiIil~v~~ 81 (274)
+++|.|+|+|.||..+++.|.+.| + +|+++ +|++++.+.+...++... .+..+.++++|+||.|+|.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~----~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNY----SVTVA-DHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF 79 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSE----EEEEE-ESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCc----eEEEE-eCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence 468999999999999999999999 7 99999 999999888876554422 1223456789999999987
Q ss_pred ccHHHHHHHhccccCCCCEEEEecCC
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~~~g 107 (274)
.....++.... ..+..++++++.
T Consensus 80 ~~~~~~~~~~~---~~g~~~~~~~~~ 102 (118)
T 3ic5_A 80 FLTPIIAKAAK---AAGAHYFDLTED 102 (118)
T ss_dssp GGHHHHHHHHH---HTTCEEECCCSC
T ss_pred hhhHHHHHHHH---HhCCCEEEecCc
Confidence 77666665443 345566665443
No 149
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.90 E-value=4.9e-09 Score=90.39 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=71.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH----H------cC--ceeccCchhhccCCCEEE
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE----S------IG--VKVLSDNNAVVEYSDVVV 76 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~----~------~g--~~~~~~~~~~~~~aDiIi 76 (274)
+.+||+|||+|.||.+++..|..+|+. +|++| |+++++++... . .. +...++. +.+++||+||
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~---~V~l~-D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi 77 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLA---DVVLF-DIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVI 77 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC---EEEEE-CSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCc---eEEEE-eCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEE
Confidence 457999999999999999999999862 79999 99987765431 1 12 3333555 7789999999
Q ss_pred EeeC----------------cccHHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 77 FSVK----------------PQVVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 77 l~v~----------------~~~~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
++++ .+.++++++++.++. |+.+++..+++...
T Consensus 78 ~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~~~ 126 (317)
T 2ewd_A 78 ITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPLDV 126 (317)
T ss_dssp ECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHH
T ss_pred EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChHHH
Confidence 9993 123567777787764 68888888776543
No 150
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.89 E-value=2.7e-08 Score=75.23 Aligned_cols=92 Identities=11% Similarity=0.196 Sum_probs=66.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cCc--hh-----hccCCCEEEEeeCc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN--NA-----VVEYSDVVVFSVKP 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~~--~~-----~~~~aDiIil~v~~ 81 (274)
..+|.|+|+|.+|..+++.|.+.|+ +|+++ ++++++.+.+.+.|+.+. .+. .+ -++++|+||+++++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~----~v~vi-d~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI----PLVVI-ETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC----CEEEE-ECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 4589999999999999999999999 99999 999999999888777532 221 11 14689999999987
Q ss_pred ccHHH-HHHHhccccCCCCEEEEecCC
Q 024016 82 QVVKD-VAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 82 ~~~~~-v~~~i~~~l~~~~~vis~~~g 107 (274)
+.... ++..+. .+.++..+|.-...
T Consensus 82 ~~~n~~~~~~a~-~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 82 GYEAGEIVASAR-AKNPDIEIIARAHY 107 (140)
T ss_dssp HHHHHHHHHHHH-HHCSSSEEEEEESS
T ss_pred hHHHHHHHHHHH-HHCCCCeEEEEECC
Confidence 65333 333332 23455556654443
No 151
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.89 E-value=1.8e-09 Score=89.10 Aligned_cols=80 Identities=23% Similarity=0.341 Sum_probs=62.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHHcCceeccCchhhc-cCCCEEEEeeCcccHHHHH
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAVV-EYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v-~v~~~r~~~~~~~l~~~g~~~~~~~~~~~-~~aDiIil~v~~~~~~~v~ 88 (274)
|||||||+|+||..++++|.+.|+ ++ .+| ||++ +.+. .++++.+++ .++|+|++|+|++...+++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~----~lv~v~-d~~~-~~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~~~~~ 67 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGF----EIAAIL-DVRG-EHEK-------MVRGIDEFLQREMDVAVEAASQQAVKDYA 67 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEEE-CSSC-CCTT-------EESSHHHHTTSCCSEEEECSCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCC----EEEEEE-ecCc-chhh-------hcCCHHHHhcCCCCEEEECCCHHHHHHHH
Confidence 589999999999999999998888 87 688 9885 3321 557788888 6899999999988777766
Q ss_pred HHhccccCCCCEEEEecC
Q 024016 89 MQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~ 106 (274)
... +..|+.+++.+.
T Consensus 68 ~~~---l~~G~~vv~~~~ 82 (236)
T 2dc1_A 68 EKI---LKAGIDLIVLST 82 (236)
T ss_dssp HHH---HHTTCEEEESCG
T ss_pred HHH---HHCCCcEEEECc
Confidence 543 456777776543
No 152
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.87 E-value=6.8e-09 Score=89.97 Aligned_cols=80 Identities=10% Similarity=0.174 Sum_probs=65.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCc-eeccCchhhcc--CCCEEEEeeCc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSVKP 81 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDiIil~v~~ 81 (274)
|+++||||||+|.||..++..|.+. ++ ++. ++ +|++++++.+.+ .|+ ..+++..++++ ++|+|++|+|+
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQA----EVRGIA-SRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYN 77 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSE----EEEEEB-CSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCG
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCc----EEEEEE-eCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCC
Confidence 4567999999999999999999885 44 665 66 999999888776 677 57788888887 79999999999
Q ss_pred ccHHHHHHHhc
Q 024016 82 QVVKDVAMQIR 92 (274)
Q Consensus 82 ~~~~~v~~~i~ 92 (274)
....+++....
T Consensus 78 ~~h~~~~~~al 88 (330)
T 3e9m_A 78 QGHYSAAKLAL 88 (330)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88777665543
No 153
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.87 E-value=2.9e-09 Score=91.70 Aligned_cols=92 Identities=21% Similarity=0.291 Sum_probs=66.0
Q ss_pred CCCCCCCCCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcE-EEEeCCCHHHHHHHHHcCceeccCchhhcc--CCCEEE
Q 024016 1 MDAFPIPAESFILGFIGAGKMAESIAKGVAKS-GVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVV 76 (274)
Q Consensus 1 ~~~~~~~~~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v-~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDiIi 76 (274)
|+ .|..++++||||||+|+||..++..|.+. ++ ++ .++ +|++++++.+.+. +..+++..++++ ++|+|+
T Consensus 2 m~-~p~~~~~~~igiIG~G~~g~~~~~~l~~~~~~----~~v~v~-d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~ 74 (315)
T 3c1a_A 2 MS-IPANNSPVRLALIGAGRWGKNYIRTIAGLPGA----ALVRLA-SSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVI 74 (315)
T ss_dssp --------CCEEEEEEECTTTTTTHHHHHHHCTTE----EEEEEE-ESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEE
T ss_pred CC-CCCCCCcceEEEECCcHHHHHHHHHHHhCCCc----EEEEEE-eCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEE
Confidence 44 34445568999999999999999999885 44 54 477 9999887766554 666778888875 799999
Q ss_pred EeeCcccHHHHHHHhccccCCCCEEE
Q 024016 77 FSVKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 77 l~v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+|+|+....+++.... ..|+-|+
T Consensus 75 i~tp~~~h~~~~~~al---~~Gk~v~ 97 (315)
T 3c1a_A 75 IATPPATHAEITLAAI---ASGKAVL 97 (315)
T ss_dssp EESCGGGHHHHHHHHH---HTTCEEE
T ss_pred EeCChHHHHHHHHHHH---HCCCcEE
Confidence 9999988777776543 3455444
No 154
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.87 E-value=9.3e-09 Score=89.07 Aligned_cols=77 Identities=21% Similarity=0.334 Sum_probs=64.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhcc--CCCEEEEeeCcccH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFSVKPQVV 84 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDiIil~v~~~~~ 84 (274)
++||||||+|.||..++..|.+. ++ ++. ++ +|++++++.+.+ .|+. +++..++++ ++|+|++|+|+...
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h 76 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADA----RLVAVA-DAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTH 76 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTE----EEEEEE-CSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCc----EEEEEE-CCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhH
Confidence 46999999999999999999885 44 665 67 999999888876 6888 788888887 79999999999887
Q ss_pred HHHHHHhc
Q 024016 85 KDVAMQIR 92 (274)
Q Consensus 85 ~~v~~~i~ 92 (274)
.+++....
T Consensus 77 ~~~~~~al 84 (331)
T 4hkt_A 77 ADLIERFA 84 (331)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77765543
No 155
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.86 E-value=5.2e-08 Score=84.14 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=71.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC-CCCCCcE-EEEeCCCHHHHHHHHH-cCc-eeccCchhhc-cCCCEEEEeeCcccHH
Q 024016 11 FILGFIGAGKMAESIAKGVAKSG-VLPPDRI-CTAVHSNLKRRDAFES-IGV-KVLSDNNAVV-EYSDVVVFSVKPQVVK 85 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g-~~~~~~v-~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~-~~aDiIil~v~~~~~~ 85 (274)
+||||||+|.||..++..|.+.+ + ++ .++ +|++++++.+.+ .|. ..+++..+++ .++|+|++|+|+....
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~----~~~~v~-d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~ 76 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEY----QLVAIY-SRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHF 76 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSE----EEEEEE-CSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCe----EEEEEE-eCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHH
Confidence 58999999999999999998763 3 55 477 999999888776 564 6677888888 6899999999998877
Q ss_pred HHHHHhccccCCCCEEEEe-cCCCCHHHHHH
Q 024016 86 DVAMQIRPLLSRKKLLVSV-AAGVKLKDLQE 115 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~-~~g~~~~~l~~ 115 (274)
+++.... ..|+-|+.- .-..+.+..++
T Consensus 77 ~~~~~al---~~gk~V~~EKP~~~~~~~~~~ 104 (325)
T 2ho3_A 77 AQAKAAL---SAGKHVILEKPAVSQPQEWFD 104 (325)
T ss_dssp HHHHHHH---HTTCEEEEESSCCSSHHHHHH
T ss_pred HHHHHHH---HcCCcEEEecCCcCCHHHHHH
Confidence 7766543 345544432 12334444433
No 156
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.84 E-value=2.9e-08 Score=84.99 Aligned_cols=111 Identities=15% Similarity=0.245 Sum_probs=75.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c------CceeccCchhhccCCCEEEEeeCc
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I------GVKVLSDNNAVVEYSDVVVFSVKP 81 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~---~------g~~~~~~~~~~~~~aDiIil~v~~ 81 (274)
|||+|||+|.||.+++..|...|+. .+|.+| |+++++++.... . ..++..+..+.+++||+||++++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~--~eV~L~-D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~ 77 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSC--SELVLV-DRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGA 77 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC--SEEEEE-CSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 5899999999999999999999873 379999 999886654322 1 123322335678899999999942
Q ss_pred c----------------cHHHHHHHhccccCCCCEEEEecCCCCH--HHHHHhhCCCceEEE
Q 024016 82 Q----------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTGHSRFIRV 125 (274)
Q Consensus 82 ~----------------~~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~~~~~~~~~~ 125 (274)
. .++++++++.++ .|+.+++..+++... ..+.+..+..+++..
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 78 NQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 2 236666777776 577787777777654 223444443455543
No 157
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.83 E-value=1.9e-08 Score=88.23 Aligned_cols=87 Identities=18% Similarity=0.252 Sum_probs=68.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHHcCceeccCchhhcc--CCCEEEEeeCccc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDiIil~v~~~~ 83 (274)
|+++||||||+|.||...+..|.+. ++ ++. ++ ++++++++...+.|+..++|..++++ +.|+|++|+|+..
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNL----EVHGVF-DILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDS 77 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTE----EEEEEE-CSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGG
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCc----EEEEEE-cCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 4567999999999999999999876 44 665 56 99999887666688888888888887 7899999999988
Q ss_pred HHHHHHHhccccCCCCEEE
Q 024016 84 VKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vi 102 (274)
..++..... ..|+-|+
T Consensus 78 h~~~~~~al---~aGkhVl 93 (359)
T 3e18_A 78 HKELAISAL---EAGKHVV 93 (359)
T ss_dssp HHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHH---HCCCCEE
Confidence 777665543 3455455
No 158
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.82 E-value=1.7e-08 Score=87.98 Aligned_cols=97 Identities=19% Similarity=0.319 Sum_probs=71.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCc-eeccCchhhcc--CCCEEEEeeCccc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSVKPQV 83 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDiIil~v~~~~ 83 (274)
++||||||+|+||..++..|.+. ++ ++. ++ +|++++++.+.+ .|+ ..+++..++++ ++|+|++|+|+..
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 76 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDA----ILYAIS-DVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNT 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTE----EEEEEE-CSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCc----EEEEEE-CCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcc
Confidence 36999999999999999999875 34 665 67 999999888776 676 47788888887 7999999999988
Q ss_pred HHHHHHHhccccCCCCEEE-EecCCCCHHHHH
Q 024016 84 VKDVAMQIRPLLSRKKLLV-SVAAGVKLKDLQ 114 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vi-s~~~g~~~~~l~ 114 (274)
..+++.... ..|+-|+ .-.-+.+.+...
T Consensus 77 h~~~~~~al---~~gk~v~~EKP~~~~~~e~~ 105 (344)
T 3ezy_A 77 HSELVIACA---KAKKHVFCEKPLSLNLADVD 105 (344)
T ss_dssp HHHHHHHHH---HTTCEEEEESCSCSCHHHHH
T ss_pred hHHHHHHHH---hcCCeEEEECCCCCCHHHHH
Confidence 777665543 2444444 221234444433
No 159
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.81 E-value=1.4e-08 Score=83.92 Aligned_cols=90 Identities=21% Similarity=0.177 Sum_probs=66.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
|+++||+|+|+|+||+.+++.+.+.++ ++. ++ +|+++. ..|+.++++..++. ++|+||-++.|+.+.+
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~----eLva~~-d~~~~~-----~~gv~v~~dl~~l~-~~DVvIDft~p~a~~~ 69 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH----EIVGVI-ENTPKA-----TTPYQQYQHIADVK-GADVAIDFSNPNLLFP 69 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC----EEEEEE-CSSCC-------CCSCBCSCTTTCT-TCSEEEECSCHHHHHH
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC----EEEEEE-ecCccc-----cCCCceeCCHHHHh-CCCEEEEeCChHHHHH
Confidence 346899999999999999999998875 655 46 887652 36888888888877 9999998888877766
Q ss_pred HHHHhccccCCCCEEEEecCCCCHHHH
Q 024016 87 VAMQIRPLLSRKKLLVSVAAGVKLKDL 113 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~g~~~~~l 113 (274)
.+. +..+..+|..+.|.+.+.+
T Consensus 70 ~~~-----l~~g~~vVigTTG~s~e~~ 91 (243)
T 3qy9_A 70 LLD-----EDFHLPLVVATTGEKEKLL 91 (243)
T ss_dssp HHT-----SCCCCCEEECCCSSHHHHH
T ss_pred HHH-----HhcCCceEeCCCCCCHHHH
Confidence 664 3455556656667765444
No 160
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.79 E-value=2.9e-08 Score=86.44 Aligned_cols=88 Identities=13% Similarity=0.261 Sum_probs=67.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHH-hC-CCCCCCcE-EEEeCCCHHHHHHHHH-cCc-eeccCchhhcc--CCCEEEEee
Q 024016 7 PAESFILGFIGAGKMAESIAKGVA-KS-GVLPPDRI-CTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSV 79 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~-~~-g~~~~~~v-~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDiIil~v 79 (274)
+++++||||||+|.||..++..|. +. ++ ++ .++ ++++++++.+.+ .|+ ..+++..++++ ++|+|++|+
T Consensus 5 ~~~~~~v~iiG~G~ig~~~~~~l~~~~~~~----~~vav~-d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~t 79 (346)
T 3cea_A 5 TRKPLRAAIIGLGRLGERHARHLVNKIQGV----KLVAAC-ALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVA 79 (346)
T ss_dssp CCCCEEEEEECCSTTHHHHHHHHHHTCSSE----EEEEEE-CSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECS
T ss_pred CCCcceEEEEcCCHHHHHHHHHHHhcCCCc----EEEEEe-cCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeC
Confidence 345679999999999999999998 53 44 64 567 999999888776 677 66778888876 699999999
Q ss_pred CcccHHHHHHHhccccCCCCEEE
Q 024016 80 KPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 80 ~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
|+....+++.... ..|+.|+
T Consensus 80 p~~~h~~~~~~al---~~G~~v~ 99 (346)
T 3cea_A 80 PTPFHPEMTIYAM---NAGLNVF 99 (346)
T ss_dssp CGGGHHHHHHHHH---HTTCEEE
T ss_pred ChHhHHHHHHHHH---HCCCEEE
Confidence 9887766665443 3455554
No 161
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.79 E-value=2.8e-08 Score=87.03 Aligned_cols=88 Identities=19% Similarity=0.289 Sum_probs=67.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHH-h-CCCCCCCcEE-EEeCCCHHHHHHHHH-cC--ceeccCchhhcc--CCCEEEEe
Q 024016 7 PAESFILGFIGAGKMAESIAKGVA-K-SGVLPPDRIC-TAVHSNLKRRDAFES-IG--VKVLSDNNAVVE--YSDVVVFS 78 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~-~-~g~~~~~~v~-v~~~r~~~~~~~l~~-~g--~~~~~~~~~~~~--~aDiIil~ 78 (274)
.|+++||||||+|.||..++..|. + .++ ++. ++ ++++++++.+.+ .| +..+++..++++ +.|+|++|
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~----~lvav~-d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~ 94 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGV----EVVAVC-DIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIIT 94 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTE----EEEEEE-CSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEEC
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCc----EEEEEE-eCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEc
Confidence 345679999999999999999998 4 344 665 67 999999888776 57 677888888876 58999999
Q ss_pred eCcccHHHHHHHhccccCCCCEEE
Q 024016 79 VKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 79 v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+|+....+++.... ..|+-|+
T Consensus 95 tp~~~h~~~~~~al---~aGk~Vl 115 (357)
T 3ec7_A 95 ASNEAHADVAVAAL---NANKYVF 115 (357)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HCCCCEE
Confidence 99988777665543 3444444
No 162
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.79 E-value=1.9e-08 Score=86.70 Aligned_cols=87 Identities=10% Similarity=0.081 Sum_probs=64.6
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCccc
Q 024016 8 AESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~-~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~ 83 (274)
|+++||||||+|.||.. ++..|.+. ++ ++. ++ +|++++++.+.+ .|+..+++.+++..++|+|++|+|+..
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~----~lvav~-d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~ 77 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDW----TLQGAW-SPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTAS 77 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSE----EEEEEE-CSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCe----EEEEEE-CCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchh
Confidence 45679999999999996 88888763 44 665 77 999998887776 577666676666568999999999887
Q ss_pred HHHHHHHhccccCCCCEEE
Q 024016 84 VKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vi 102 (274)
..+++.... ..|+-|+
T Consensus 78 h~~~~~~al---~~G~~v~ 93 (319)
T 1tlt_A 78 HFDVVSTLL---NAGVHVC 93 (319)
T ss_dssp HHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHH---HcCCeEE
Confidence 766665543 3455444
No 163
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.78 E-value=3.2e-08 Score=86.17 Aligned_cols=85 Identities=16% Similarity=0.286 Sum_probs=66.9
Q ss_pred CCeEEEEcccHHHHHHHHHHH-h-CCCCCCCcEE-EEeCCCHHHHHHHHH-cC--ceeccCchhhccC--CCEEEEeeCc
Q 024016 10 SFILGFIGAGKMAESIAKGVA-K-SGVLPPDRIC-TAVHSNLKRRDAFES-IG--VKVLSDNNAVVEY--SDVVVFSVKP 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~-~-~g~~~~~~v~-v~~~r~~~~~~~l~~-~g--~~~~~~~~~~~~~--aDiIil~v~~ 81 (274)
++||||||+|.||..++..|. + .++ ++. ++ +|++++++.+.+ .| ...+++..+++++ .|+|++|+|+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~----~l~av~-d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGA----EIVAVT-DVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWG 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSE----EEEEEE-CSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCc----EEEEEE-cCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCc
Confidence 369999999999999999998 4 344 665 66 999999988876 67 6778899888875 8999999999
Q ss_pred ccHHHHHHHhccccCCCCEEE
Q 024016 82 QVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vi 102 (274)
....+++.... ..|+-|+
T Consensus 77 ~~h~~~~~~al---~~Gk~vl 94 (344)
T 3mz0_A 77 PAHESSVLKAI---KAQKYVF 94 (344)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred hhHHHHHHHHH---HCCCcEE
Confidence 88777765543 3444444
No 164
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.78 E-value=2.4e-08 Score=89.89 Aligned_cols=101 Identities=12% Similarity=0.115 Sum_probs=77.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
....++|+|||+|.||..+|+.+...|. +|++| +|++.+.......|+.. .+..+++++||+|++++....+-
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~----~Viv~-d~~~~~~~~a~~~g~~~-~~l~ell~~aDiVi~~~~t~~lI- 326 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGA----RVYIT-EIDPICAIQAVMEGFNV-VTLDEIVDKGDFFITCTGNVDVI- 326 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC----EEEEE-CSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECCSSSSSB-
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcC----EEEEE-eCChhhHHHHHHcCCEe-cCHHHHHhcCCEEEECCChhhhc-
Confidence 4456899999999999999999999998 99999 99998765555567765 47888999999999997433221
Q ss_pred HHHHhccccCCCCEEEEecCC---CCHHHHHH
Q 024016 87 VAMQIRPLLSRKKLLVSVAAG---VKLKDLQE 115 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~g---~~~~~l~~ 115 (274)
-.+....+++|.++|++..+ +..+.+.+
T Consensus 327 -~~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 327 -KLEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp -CHHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred -CHHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 02333457899999988755 35566665
No 165
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.78 E-value=3.8e-08 Score=84.92 Aligned_cols=77 Identities=19% Similarity=0.240 Sum_probs=60.3
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cCcee-ccCchhhc-cCCCEEEEeeCcccH
Q 024016 10 SFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IGVKV-LSDNNAVV-EYSDVVVFSVKPQVV 84 (274)
Q Consensus 10 ~~~IgiIG~G~mG~-~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~-~~~~~~~~-~~aDiIil~v~~~~~ 84 (274)
++||||||+|+||. .++..|.+. ++ ++.++ +|++++++.+.+ .|+.. ..+..+.+ .++|+|++|+|++..
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~----~l~v~-d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h 76 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDI----ELVLC-TRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVH 76 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTE----EEEEE-CSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCc----eEEEE-eCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhH
Confidence 36999999999998 599998764 44 77788 999999988776 67653 44545555 679999999999887
Q ss_pred HHHHHHh
Q 024016 85 KDVAMQI 91 (274)
Q Consensus 85 ~~v~~~i 91 (274)
.+++...
T Consensus 77 ~~~~~~a 83 (323)
T 1xea_A 77 STLAAFF 83 (323)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776554
No 166
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.76 E-value=5.9e-08 Score=78.90 Aligned_cols=92 Identities=17% Similarity=0.163 Sum_probs=67.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceec-cC---c---hh-hccCCCEEEEeeCc
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVL-SD---N---NA-VVEYSDVVVFSVKP 81 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~-~~---~---~~-~~~~aDiIil~v~~ 81 (274)
|||.|+|+|.+|..+++.|.+.|+ +|+++ ++++++.+.+.+ .|..+. .+ . .+ -++++|+||+++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~----~v~vi-d~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY----GVVII-NKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC----CEEEE-ESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC----eEEEE-ECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 589999999999999999999999 99999 999999988765 465432 12 1 12 25789999999998
Q ss_pred ccHHHHHHHhccccCCCCEEEEecCC
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~~~g 107 (274)
+.....+..+...+.+...+|.....
T Consensus 76 d~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 76 DEVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred cHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 87666555554443455556654443
No 167
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.75 E-value=4.7e-08 Score=83.89 Aligned_cols=92 Identities=18% Similarity=0.213 Sum_probs=65.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHH---c-------C--ceeccCchhhccCCCEEE
Q 024016 11 FILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFES---I-------G--VKVLSDNNAVVEYSDVVV 76 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~---~-------g--~~~~~~~~~~~~~aDiIi 76 (274)
|||+|||+|.||.+++..|..+ |+ +|++| |+++++++.+.. . . +..+++..+ +++||+||
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~----~V~l~-D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvVi 74 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLAR----ELVLL-DVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVI 74 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCS----EEEEE-CSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCC----EEEEE-eCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEE
Confidence 5899999999999999999885 56 99999 999887765431 1 1 233355555 89999999
Q ss_pred EeeCcc----------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 77 FSVKPQ----------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 77 l~v~~~----------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+|+|.. .++++.+.+.++ .++..++..+++..
T Consensus 75 iav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~tNP~~ 122 (310)
T 1guz_A 75 ITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVSNPLD 122 (310)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEECCSSHH
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEEcCchH
Confidence 999521 124555556665 46667776766554
No 168
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.75 E-value=1.8e-08 Score=86.96 Aligned_cols=87 Identities=16% Similarity=0.170 Sum_probs=66.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c-----CceeccCchhhccCCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I-----GVKVLSDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~-----g~~~~~~~~~~~~~aDiIil~v~~~ 82 (274)
+.++|+|||+|.||..++..|.+..- ..+|.+| ||++++++++.+ . .+. +++..+++ ++|+|++|||..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~--~~~V~v~-~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~ 198 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFD--IGEVKAY-DVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSR 198 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSC--CCEEEEE-CSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCS
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCC--ccEEEEE-CCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCC
Confidence 45799999999999999999987321 1389999 999999988876 2 244 67778888 999999999864
Q ss_pred cHHHHHHHhccccCCCCEEEEe
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~ 104 (274)
. .++. ...+++|+.|+++
T Consensus 199 ~--pv~~--~~~l~~G~~V~~i 216 (322)
T 1omo_A 199 K--PVVK--AEWVEEGTHINAI 216 (322)
T ss_dssp S--CCBC--GGGCCTTCEEEEC
T ss_pred C--ceec--HHHcCCCeEEEEC
Confidence 3 2221 1457888877765
No 169
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.74 E-value=4.7e-08 Score=84.50 Aligned_cols=93 Identities=15% Similarity=0.186 Sum_probs=68.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH----H----c--C--ceeccCchhhccCCCEEEEe
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE----S----I--G--VKVLSDNNAVVEYSDVVVFS 78 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~----~----~--g--~~~~~~~~~~~~~aDiIil~ 78 (274)
+||+|||+|.||.+++..|...|+. +|.+| |+++++++... . . . ++.+++. +.+++||+||++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~---~V~L~-Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~a 89 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLG---DVYMF-DIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIIT 89 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC---EEEEE-CSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC---eEEEE-ECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEc
Confidence 6999999999999999999999873 69999 99987766422 1 1 1 3344555 778999999999
Q ss_pred e--Cc--------------ccHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 79 V--KP--------------QVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 79 v--~~--------------~~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+ |. ..++++++++..+. |+.+++..++++.
T Consensus 90 vg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~ 135 (328)
T 2hjr_A 90 AGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLD 135 (328)
T ss_dssp CSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred CCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchH
Confidence 8 32 12556667777664 7777766666544
No 170
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.73 E-value=3e-08 Score=89.58 Aligned_cols=101 Identities=9% Similarity=0.066 Sum_probs=75.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCccc-HH
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-VK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~-~~ 85 (274)
....++|+|||+|.||..+|+.+...|. +|++| +|++.+.......|... .+..++++++|+|++++.... +.
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~----~V~v~-d~~~~~~~~a~~~G~~~-~~l~ell~~aDiVi~~~~t~~lI~ 347 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA----TVWVT-EIDPICALQAAMEGYRV-VTMEYAADKADIFVTATGNYHVIN 347 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC----EEEEE-CSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECSSSSCSBC
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-eCChHhHHHHHHcCCEe-CCHHHHHhcCCEEEECCCcccccC
Confidence 3456899999999999999999999998 99999 99998754444567765 378889999999999984332 21
Q ss_pred HHHHHhccccCCCCEEEEecCC---CCHHHHHHhh
Q 024016 86 DVAMQIRPLLSRKKLLVSVAAG---VKLKDLQEWT 117 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~g---~~~~~l~~~~ 117 (274)
.+....++++.++|++..+ +..+.+ +.+
T Consensus 348 ---~~~l~~MK~gAilINvgrg~veID~~aL-~AL 378 (494)
T 3d64_A 348 ---HDHMKAMRHNAIVCNIGHFDSEIDVAST-RQY 378 (494)
T ss_dssp ---HHHHHHCCTTEEEEECSSSSCSBCCGGG-TTS
T ss_pred ---HHHHhhCCCCcEEEEcCCCcchhchHHH-Hhh
Confidence 2233456889999988755 244555 444
No 171
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.73 E-value=1.2e-08 Score=89.24 Aligned_cols=92 Identities=11% Similarity=0.125 Sum_probs=70.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceecc-------------------------
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLS------------------------- 63 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~------------------------- 63 (274)
...||+|||+|.||..+++.+...|. +|++| ||++++.+.+.+.|.+...
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa----~V~v~-D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA----KTTGY-DVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC----EEEEE-CSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHH
Confidence 34699999999999999999999998 99999 9999999888887765432
Q ss_pred CchhhccCCCEEEEee--CcccHHHHH-HHhccccCCCCEEEEec
Q 024016 64 DNNAVVEYSDVVVFSV--KPQVVKDVA-MQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 64 ~~~~~~~~aDiIil~v--~~~~~~~v~-~~i~~~l~~~~~vis~~ 105 (274)
+..+.++++|+||.++ |......++ ++....+++|.+||+++
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 3456788999999986 422111111 34445577999999875
No 172
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.72 E-value=3.9e-08 Score=87.10 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=76.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
...++|+|||+|.+|..+++.|...|. +|+++ ++++.+.......|.... +..++++.+|+|+++.....+-.
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~Ga----~Viv~-D~~p~~a~~A~~~G~~~~-sL~eal~~ADVVilt~gt~~iI~- 281 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFGA----RVVVT-EVDPINALQAAMEGYQVL-LVEDVVEEAHIFVTTTGNDDIIT- 281 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEEC-CHHHHTTTCSEEEECSSCSCSBC-
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-CCChhhhHHHHHhCCeec-CHHHHHhhCCEEEECCCCcCccC-
Confidence 356799999999999999999999998 99999 999987766666787654 78899999999998765433211
Q ss_pred HHHhccccCCCCEEEEecCC---CCHHHHHH
Q 024016 88 AMQIRPLLSRKKLLVSVAAG---VKLKDLQE 115 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~~~g---~~~~~l~~ 115 (274)
.+....++++.+||++..+ +..+.+.+
T Consensus 282 -~e~l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 282 -SEHFPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp -TTTGGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred -HHHHhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 2344557899999988654 34455554
No 173
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.71 E-value=1.9e-08 Score=87.08 Aligned_cols=88 Identities=17% Similarity=0.204 Sum_probs=64.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHH-cCce-eccCchhhcc--CCCEEEEeeCcc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFES-IGVK-VLSDNNAVVE--YSDVVVFSVKPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~--~aDiIil~v~~~ 82 (274)
|+++||||||+|+||..++..|.+.+. .++. ++ +|++++++.+.+ .|+. .+++..++++ +.|+|++|+|+.
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~---~~~~av~-d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGN---GEVVAVS-SRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQ 78 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCS---EEEEEEE-CSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGG
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCC---cEEEEEE-cCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcH
Confidence 456799999999999999999987643 1554 66 999998877766 5764 6788888887 789999999998
Q ss_pred cHHHHHHHhccccCCCCEEE
Q 024016 83 VVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vi 102 (274)
...+++.... ..|+-|+
T Consensus 79 ~h~~~~~~al---~aGk~Vl 95 (329)
T 3evn_A 79 DHYKVAKAAL---LAGKHVL 95 (329)
T ss_dssp GHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHH---HCCCeEE
Confidence 8777665543 3444444
No 174
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.71 E-value=7.7e-08 Score=83.20 Aligned_cols=84 Identities=17% Similarity=0.267 Sum_probs=65.4
Q ss_pred CeEEEEcccHHHHHH-HHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHH-cCce-eccCchhhcc--CCCEEEEeeCcccH
Q 024016 11 FILGFIGAGKMAESI-AKGVAKSGVLPPDRIC-TAVHSNLKRRDAFES-IGVK-VLSDNNAVVE--YSDVVVFSVKPQVV 84 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~-a~~L~~~g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~-~~~~~~~~~~--~aDiIil~v~~~~~ 84 (274)
+||||||+|.||..+ +..|.+.++ ++. ++ +|++++++.+.+ .|+. .+++..++++ ++|+|++|+|++..
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~----~~vav~-d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h 75 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGG----EVVSMM-STSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELH 75 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTC----EEEEEE-CSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCC----eEEEEE-CCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHh
Confidence 489999999999998 888887665 665 67 999999888776 6764 6678888876 59999999999887
Q ss_pred HHHHHHhccccCCCCEEE
Q 024016 85 KDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vi 102 (274)
.+++.... ..|+.|+
T Consensus 76 ~~~~~~al---~~Gk~v~ 90 (332)
T 2glx_A 76 REQTLAAI---RAGKHVL 90 (332)
T ss_dssp HHHHHHHH---HTTCEEE
T ss_pred HHHHHHHH---HCCCeEE
Confidence 77665543 3455454
No 175
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.71 E-value=2.6e-08 Score=75.08 Aligned_cols=92 Identities=15% Similarity=0.255 Sum_probs=62.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-c---Cch---hh-ccCCCEEEEeeCc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-S---DNN---AV-VEYSDVVVFSVKP 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~---~~~---~~-~~~aDiIil~v~~ 81 (274)
+++|.|+|+|.+|..+++.|.+.|+ +|+++ +|++++.+.+.+.+.... . +.. ++ ..++|+||.|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~----~v~~~-d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH----EVLAV-DINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC----CCEEE-ESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence 4579999999999999999999998 89999 999988877665554322 1 111 22 5679999999986
Q ss_pred c-cHHHHHHHhccccCCCCEEEEecCC
Q 024016 82 Q-VVKDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 82 ~-~~~~v~~~i~~~l~~~~~vis~~~g 107 (274)
+ .....+......+.+. .++..+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 81 NIQASTLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp CHHHHHHHHHHHHHTTCS-EEEEECCS
T ss_pred chHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence 5 3332233333334455 44444443
No 176
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.70 E-value=5.6e-08 Score=85.20 Aligned_cols=89 Identities=15% Similarity=0.297 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcE-EEEeCCCHHHHHHHHH-cC----ceeccCchhhcc--CCCEEEE
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKS-GVLPPDRI-CTAVHSNLKRRDAFES-IG----VKVLSDNNAVVE--YSDVVVF 77 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v-~v~~~r~~~~~~~l~~-~g----~~~~~~~~~~~~--~aDiIil 77 (274)
+++++||||||+|.||..++..|.+. ++ ++ .++ +|++++++.+.+ .| ...+++..++++ ++|+|++
T Consensus 3 ~~~~~~vgiiG~G~ig~~~~~~l~~~~~~----~lv~v~-d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i 77 (362)
T 1ydw_A 3 TETQIRIGVMGCADIARKVSRAIHLAPNA----TISGVA-SRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYV 77 (362)
T ss_dssp ---CEEEEEESCCTTHHHHHHHHHHCTTE----EEEEEE-CSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEE
T ss_pred CCCceEEEEECchHHHHHHHHHHhhCCCc----EEEEEE-cCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEE
Confidence 34567999999999999999999875 33 55 466 999999887776 56 466778888875 5899999
Q ss_pred eeCcccHHHHHHHhccccCCCCEEEE
Q 024016 78 SVKPQVVKDVAMQIRPLLSRKKLLVS 103 (274)
Q Consensus 78 ~v~~~~~~~v~~~i~~~l~~~~~vis 103 (274)
|+|+....+++... +..|+-|+.
T Consensus 78 ~tp~~~h~~~~~~a---l~aGk~V~~ 100 (362)
T 1ydw_A 78 PLPTSLHVEWAIKA---AEKGKHILL 100 (362)
T ss_dssp CCCGGGHHHHHHHH---HTTTCEEEE
T ss_pred cCChHHHHHHHHHH---HHCCCeEEE
Confidence 99998877776554 345665553
No 177
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.69 E-value=1e-07 Score=86.03 Aligned_cols=110 Identities=20% Similarity=0.232 Sum_probs=74.0
Q ss_pred CCCeEEEEcccHH--HHHHHHHHHhC----CCCCCCcEEEEeCCCHHHHHHHHH--------c--C--ceeccCchhhcc
Q 024016 9 ESFILGFIGAGKM--AESIAKGVAKS----GVLPPDRICTAVHSNLKRRDAFES--------I--G--VKVLSDNNAVVE 70 (274)
Q Consensus 9 ~~~~IgiIG~G~m--G~~~a~~L~~~----g~~~~~~v~v~~~r~~~~~~~l~~--------~--g--~~~~~~~~~~~~ 70 (274)
+++||+|||+|.| |.+++..|.+. |+ +|.+| |+++++++.... . . ++.++|..++++
T Consensus 2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~----eV~L~-Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~ 76 (480)
T 1obb_A 2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGS----TVTLM-DIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVII 76 (480)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTC----EEEEE-CSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCcCCCC----EEEEE-eCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhC
Confidence 4679999999997 57778888754 66 99999 999987654322 1 1 334456667889
Q ss_pred CCCEEEEeeCcc------------------------------------------cHHHHHHHhccccCCCCEEEEecCCC
Q 024016 71 YSDVVVFSVKPQ------------------------------------------VVKDVAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 71 ~aDiIil~v~~~------------------------------------------~~~~v~~~i~~~l~~~~~vis~~~g~ 108 (274)
+||+||++++.. .+.++++.+..+ .|+..+|..++++
T Consensus 77 dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~-~P~A~ii~~TNPv 155 (480)
T 1obb_A 77 DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL-SPKAWYLQAANPI 155 (480)
T ss_dssp TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHH-CTTCEEEECSSCH
T ss_pred CCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHH-CCCeEEEEeCCcH
Confidence 999999999642 233444455543 4777888887876
Q ss_pred CH--HHHHHhhCCCceEEE
Q 024016 109 KL--KDLQEWTGHSRFIRV 125 (274)
Q Consensus 109 ~~--~~l~~~~~~~~~~~~ 125 (274)
.. ..+.+ ++..++++.
T Consensus 156 di~t~~~~k-~p~~rviG~ 173 (480)
T 1obb_A 156 FEGTTLVTR-TVPIKAVGF 173 (480)
T ss_dssp HHHHHHHHH-HSCSEEEEE
T ss_pred HHHHHHHHH-CCCCcEEec
Confidence 53 23333 554566654
No 178
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.68 E-value=1.3e-07 Score=81.92 Aligned_cols=95 Identities=12% Similarity=0.177 Sum_probs=69.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--------c--C--ceeccCchhhccCCCEEEE
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--------I--G--VKVLSDNNAVVEYSDVVVF 77 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~--------~--g--~~~~~~~~~~~~~aDiIil 77 (274)
.|||+|||+|.||.+++..|...|+. +|.+| |+++++++.... . . +..+++..+.+++||+||+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~---~V~L~-D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~ 84 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELA---DVVLY-DVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIV 84 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC---EEEEE-CSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC---eEEEE-ECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEE
Confidence 37999999999999999999998873 69999 999877655211 1 1 3334677668899999999
Q ss_pred ee--Cc--cc-----------------HHHHHHHhccccCCCCEEEEecCCCC
Q 024016 78 SV--KP--QV-----------------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 78 ~v--~~--~~-----------------~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
++ |. .. ++++.+++..+. |+.+++..+++..
T Consensus 85 a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 85 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLD 136 (331)
T ss_dssp CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred ccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchH
Confidence 98 42 22 566777777664 7777776666544
No 179
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.68 E-value=7.7e-08 Score=86.38 Aligned_cols=87 Identities=21% Similarity=0.269 Sum_probs=66.3
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcE-EEEeCCCHHHHHHHHH-cCce-----eccCchhhcc--CCCEEE
Q 024016 8 AESFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRI-CTAVHSNLKRRDAFES-IGVK-----VLSDNNAVVE--YSDVVV 76 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~-~~a~~L~~~-g~~~~~~v-~v~~~r~~~~~~~l~~-~g~~-----~~~~~~~~~~--~aDiIi 76 (274)
|+++||||||+|.||. .++..|.+. ++ ++ .++ ++++++++.+.+ .|+. .+++..++++ +.|+|+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~----~lvav~-d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~ 155 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHS----RIEALV-SGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVY 155 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSE----EEEEEE-CSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEE
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCc----EEEEEE-cCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEE
Confidence 4567999999999997 899988765 33 55 467 999999888776 5653 5678888876 689999
Q ss_pred EeeCcccHHHHHHHhccccCCCCEEE
Q 024016 77 FSVKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 77 l~v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+|+|+....+++.... ..|+-|+
T Consensus 156 iatp~~~h~~~~~~al---~aGk~Vl 178 (433)
T 1h6d_A 156 IILPNSLHAEFAIRAF---KAGKHVM 178 (433)
T ss_dssp ECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred EcCCchhHHHHHHHHH---HCCCcEE
Confidence 9999988777765543 3455444
No 180
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.67 E-value=2e-08 Score=86.57 Aligned_cols=96 Identities=11% Similarity=0.067 Sum_probs=64.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v-~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
|+++||+|||+|+||+.+++.|.+.+. .++ .++ ++++++ .+. .|+..+++..+++.++|+|++|+|++...+
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~---~elvav~-d~~~~~--~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~~ 73 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPD---MDLVGIF-SRRATL--DTK-TPVFDVADVDKHADDVDVLFLCMGSATDIP 73 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSS---EEEEEEE-ESSSCC--SSS-SCEEEGGGGGGTTTTCSEEEECSCTTTHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCC---CEEEEEE-cCCHHH--hhc-CCCceeCCHHHHhcCCCEEEEcCCcHHHHH
Confidence 456799999999999999999987642 154 566 888655 222 577777777787778999999999885433
Q ss_pred HHHHhccccCCCCEEEEe-cCCCCHHHH
Q 024016 87 VAMQIRPLLSRKKLLVSV-AAGVKLKDL 113 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~-~~g~~~~~l 113 (274)
.+.. .+..|+.++.. ..+.+.+.+
T Consensus 74 ~~~~---al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 74 EQAP---KFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp HHHH---HHTTTSEEECCCCCGGGHHHH
T ss_pred HHHH---HHHCCCEEEECCCCcCCHHHH
Confidence 3332 23445555532 223444444
No 181
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.66 E-value=1.4e-07 Score=81.81 Aligned_cols=88 Identities=13% Similarity=0.197 Sum_probs=66.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHH-cCc-eeccCchhhcc--CCCEEEEeeCcccH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSVKPQVV 84 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v-~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDiIil~v~~~~~ 84 (274)
++||||||+|.||..++..|.+.+.. ..++ .++ +|++++++.+.+ .|+ ..++|..++++ +.|+|++|+|+...
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~-~~~l~av~-d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 79 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRS-EHQVVAVA-ARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQH 79 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTT-TEEEEEEE-CSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGH
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCC-CeEEEEEE-cCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH
Confidence 36999999999999999999765420 0134 466 999999988876 677 57788888886 68999999999887
Q ss_pred HHHHHHhccccCCCCEEE
Q 024016 85 KDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vi 102 (274)
.++..... ..|+-|+
T Consensus 80 ~~~~~~al---~~GkhVl 94 (334)
T 3ohs_X 80 KAAVMLCL---AAGKAVL 94 (334)
T ss_dssp HHHHHHHH---HTTCEEE
T ss_pred HHHHHHHH---hcCCEEE
Confidence 77665543 3444444
No 182
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.66 E-value=2.9e-08 Score=85.16 Aligned_cols=87 Identities=16% Similarity=0.223 Sum_probs=64.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cCc--eeccCchhhccCCCEEEEeeCc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IGV--KVLSDNNAVVEYSDVVVFSVKP 81 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-----~g~--~~~~~~~~~~~~aDiIil~v~~ 81 (274)
+.++|+|||+|.||..+++.|.+..- ..+|.+| ||+ +++.+.+ .|+ ..+ +..++++++|+||+|||.
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~--~~~V~v~-~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s 193 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFA--LEAILVH-DPY--ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRS 193 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSC--CCEEEEE-CTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCC
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCC--CcEEEEE-CCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCC
Confidence 45799999999999999999987421 2389999 999 5555543 365 345 888999999999999986
Q ss_pred ccHHHHHHHhccccCCCCEEEEec
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~~ 105 (274)
.. .++. .+.+++|+.|+++.
T Consensus 194 ~~--pvl~--~~~l~~G~~V~~vG 213 (313)
T 3hdj_A 194 TT--PLFA--GQALRAGAFVGAIG 213 (313)
T ss_dssp SS--CSSC--GGGCCTTCEEEECC
T ss_pred CC--cccC--HHHcCCCcEEEECC
Confidence 52 2222 24578998877663
No 183
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.65 E-value=8.9e-08 Score=86.45 Aligned_cols=114 Identities=12% Similarity=0.202 Sum_probs=77.0
Q ss_pred CCCeEEEEcccHH-HHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHH----------cC--ceeccCchhhccCCC
Q 024016 9 ESFILGFIGAGKM-AESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFES----------IG--VKVLSDNNAVVEYSD 73 (274)
Q Consensus 9 ~~~~IgiIG~G~m-G~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~----------~g--~~~~~~~~~~~~~aD 73 (274)
+.+||+|||+|.+ |.+++..|++. +. +..+|.+| |+++++++...+ .. +...+|..+++++||
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l-~~~eV~L~-Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD 104 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEF-PIRKLKLY-DNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVD 104 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTS-CEEEEEEE-CSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCC-CCCEEEEE-eCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCC
Confidence 3469999999998 66688888877 32 12289999 999987654321 12 233456668889999
Q ss_pred EEEEeeCccc------------------------------------HHHHHHHhccccCCCCEEEEecCCCCH--HHHHH
Q 024016 74 VVVFSVKPQV------------------------------------VKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQE 115 (274)
Q Consensus 74 iIil~v~~~~------------------------------------~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~ 115 (274)
+||++++... +.++++.+..+ .|+..++..++++.. +.+.+
T Consensus 105 ~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~-~P~A~ii~~TNPvdi~T~~~~k 183 (472)
T 1u8x_X 105 FVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY-SPDAWMLNYSNPAAIVAEATRR 183 (472)
T ss_dssp EEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSCHHHHHHHHHH
T ss_pred EEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHH
Confidence 9999998632 33444555544 588888888887653 34445
Q ss_pred hhCCCceEEE
Q 024016 116 WTGHSRFIRV 125 (274)
Q Consensus 116 ~~~~~~~~~~ 125 (274)
..|..++++.
T Consensus 184 ~~p~~rViG~ 193 (472)
T 1u8x_X 184 LRPNSKILNI 193 (472)
T ss_dssp HSTTCCEEEC
T ss_pred hCCCCCEEEe
Confidence 4554466654
No 184
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.64 E-value=1e-07 Score=82.67 Aligned_cols=87 Identities=15% Similarity=0.227 Sum_probs=65.9
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHH-c-CceeccCchhhcc--CCCEEEEeeCc
Q 024016 8 AESFILGFIGAGKMAE-SIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFES-I-GVKVLSDNNAVVE--YSDVVVFSVKP 81 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~-~~a~~L~~~g~~~~~~v-~v~~~r~~~~~~~l~~-~-g~~~~~~~~~~~~--~aDiIil~v~~ 81 (274)
|+++||||||+|++|. .++..|...++ ++ .++ ++++++++.+.+ . ++..++|..++++ +.|+|++|+|+
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~~~~~----~lvav~-d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLIDAGA----ELAGVF-ESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIP 76 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHHHTTC----EEEEEE-CSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCG
T ss_pred CCccEEEEECCChHHHHHhhhhhcCCCc----EEEEEe-CCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCCh
Confidence 5678999999999996 67888876676 76 566 999999888876 4 6677788888876 68999999998
Q ss_pred ccHHHHHHHhccccCCCCEEE
Q 024016 82 QVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vi 102 (274)
....++..... ..|+-|+
T Consensus 77 ~~h~~~~~~al---~aGkhVl 94 (336)
T 2p2s_A 77 CDRAELALRTL---DAGKDFF 94 (336)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred hhHHHHHHHHH---HCCCcEE
Confidence 87766665433 3455444
No 185
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.64 E-value=3.8e-08 Score=86.31 Aligned_cols=89 Identities=12% Similarity=0.144 Sum_probs=67.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee------ccCchhhccCCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV------LSDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~------~~~~~~~~~~aDiIil~v~~~ 82 (274)
..+||+|||+|.||+.++..|.+. + +|+++ +|++++++.+.+..... ..+..++++++|+||.|+|+.
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~----~V~V~-~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~ 88 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-F----DVYIG-DVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-S----EEEEE-ESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-C----eEEEE-ECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChh
Confidence 457999999999999999999987 7 99999 99999999887633211 133456788999999999977
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
...++... .+..|+.+++++.
T Consensus 89 ~~~~v~~a---~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 89 LGFKSIKA---AIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHH---HHHTTCCEEECCC
T ss_pred hhHHHHHH---HHHhCCeEEEccC
Confidence 55555433 3457778888654
No 186
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.63 E-value=5.6e-08 Score=85.15 Aligned_cols=87 Identities=21% Similarity=0.334 Sum_probs=66.7
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-c-CceeccCchhhcc--CCCEEEEeeC
Q 024016 8 AESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-I-GVKVLSDNNAVVE--YSDVVVFSVK 80 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~-~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~-g~~~~~~~~~~~~--~aDiIil~v~ 80 (274)
|+++||||||+|.||.. ++..|.+. +. ++. ++ +|++++++.+.+ . +...++|..++++ +.|+|++|+|
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDI----RIVAAC-DSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTE----EEEEEE-CSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSC
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCc----EEEEEE-cCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCC
Confidence 45679999999999985 88888775 44 665 66 999999988877 3 5677888888887 4599999999
Q ss_pred cccHHHHHHHhccccCCCCEEE
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+....+++.... ..|+-|+
T Consensus 78 ~~~H~~~~~~al---~aGkhVl 96 (359)
T 3m2t_A 78 PQLHFEMGLLAM---SKGVNVF 96 (359)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HCCCeEE
Confidence 887777665543 3455444
No 187
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.63 E-value=3.1e-07 Score=79.22 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=70.5
Q ss_pred CCCCCCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c------CceeccCchhhccC
Q 024016 1 MDAFPIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I------GVKVLSDNNAVVEY 71 (274)
Q Consensus 1 ~~~~~~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~---~------g~~~~~~~~~~~~~ 71 (274)
|.+++..+ .+||+|||+|.+|.+++..|...+++ .+|.++ |+++++++.... . .+++..+..+.+++
T Consensus 1 ~~~~~~~~-~~KI~IiGaG~vG~~la~~l~~~~~~--~el~L~-Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~ 76 (326)
T 2zqz_A 1 MASITDKD-HQKVILVGDGAVGSSYAYAMVLQGIA--QEIGIV-DIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp -----CCC-CCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGG
T ss_pred CCccccCC-CCEEEEECCCHHHHHHHHHHHcCCCC--CEEEEE-eCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCC
Confidence 55666663 47999999999999999999988863 379999 999887754222 1 23344456778999
Q ss_pred CCEEEEeeCcc----------------cHHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 72 SDVVVFSVKPQ----------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 72 aDiIil~v~~~----------------~~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
||+||++.+.. .++++.+.+..+ .|+..++..++++..
T Consensus 77 aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~~ 130 (326)
T 2zqz_A 77 ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANPVDI 130 (326)
T ss_dssp CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSSHHH
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCcHHH
Confidence 99999998421 133444445544 477777777776553
No 188
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.63 E-value=1.1e-07 Score=85.06 Aligned_cols=114 Identities=15% Similarity=0.248 Sum_probs=78.0
Q ss_pred CCCCeEEEEcccHH--HHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc---------CceeccCchhhccCCCEEE
Q 024016 8 AESFILGFIGAGKM--AESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI---------GVKVLSDNNAVVEYSDVVV 76 (274)
Q Consensus 8 ~~~~~IgiIG~G~m--G~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~---------g~~~~~~~~~~~~~aDiIi 76 (274)
|+.+||+|||+|.| |..++..|+....... +|.+| |+++++++..... .++.++|..+++++||+||
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~-Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI 80 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALY-DLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVI 80 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEE-CSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEE
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEE-eCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEE
Confidence 45679999999996 6899998886432122 89999 9999887655431 2455677788999999999
Q ss_pred EeeCccc--------------------------------------HHHHHHHhccccCCCCEEEEecCCCCH--HHHHHh
Q 024016 77 FSVKPQV--------------------------------------VKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEW 116 (274)
Q Consensus 77 l~v~~~~--------------------------------------~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~ 116 (274)
+++++.. +.++++.+... .|+..+|..++++.. ..+.+.
T Consensus 81 ~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~-~p~a~~i~~tNPvdi~t~~~~k~ 159 (450)
T 3fef_A 81 ISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDY-APESWVINYTNPMSVCTRVLYKV 159 (450)
T ss_dssp ECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHH
T ss_pred eccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHH-CCCeEEEEecCchHHHHHHHHHH
Confidence 9997531 33344444443 477888888887653 334444
Q ss_pred hCCCceEE
Q 024016 117 TGHSRFIR 124 (274)
Q Consensus 117 ~~~~~~~~ 124 (274)
+|..+++.
T Consensus 160 ~p~~rviG 167 (450)
T 3fef_A 160 FPGIKAIG 167 (450)
T ss_dssp CTTCEEEE
T ss_pred CCCCCEEE
Confidence 55445554
No 189
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.62 E-value=4.2e-08 Score=86.42 Aligned_cols=91 Identities=12% Similarity=0.187 Sum_probs=69.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceecc--------------------------
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLS-------------------------- 63 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~-------------------------- 63 (274)
..||+|||+|.+|..+++.+...|. +|++| |+++++.+.+.+.|.+...
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa----~V~v~-D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~ 264 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGA----VVSAT-DVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVK 264 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSTTHHHHHHHTTCEECCCCC-----------------CHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhh
Confidence 4699999999999999999999998 99999 9999998888877764321
Q ss_pred ---CchhhccCCCEEEEee--CcccHHHH-HHHhccccCCCCEEEEec
Q 024016 64 ---DNNAVVEYSDVVVFSV--KPQVVKDV-AMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 64 ---~~~~~~~~aDiIil~v--~~~~~~~v-~~~i~~~l~~~~~vis~~ 105 (274)
+..+.++++|+||.|+ |......+ -++....+++|.+||+++
T Consensus 265 ~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 265 QAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 3456678999999986 32221111 134555678999999875
No 190
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.62 E-value=2.7e-07 Score=70.65 Aligned_cols=96 Identities=8% Similarity=0.030 Sum_probs=65.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC-HHHHHHHHH---cCceec-cC---c---hhh-ccCCCEE
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN-LKRRDAFES---IGVKVL-SD---N---NAV-VEYSDVV 75 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~-~~~~~~l~~---~g~~~~-~~---~---~~~-~~~aDiI 75 (274)
|...+|.|+|+|.+|..+++.|.+.|+ +|++. +++ +++.+.+.. .|+.+. .+ . .++ ++++|+|
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~----~V~vi-d~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQ----NVTVI-SNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC----CEEEE-ECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 345689999999999999999999999 99999 997 565555543 355432 11 1 222 6789999
Q ss_pred EEeeCcccHHHHHHHhccccCCCCEEEEecCCC
Q 024016 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 76 il~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~ 108 (274)
|++++++.....+......+.+...++...+..
T Consensus 76 i~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 76 LALSDNDADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp EECSSCHHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred EEecCChHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 999988765555544444443444455444443
No 191
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.61 E-value=8.2e-08 Score=82.17 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=56.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHHcCce--eccCchhhccCCCEEEEeeCccc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFESIGVK--VLSDNNAVVEYSDVVVFSVKPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~~g~~--~~~~~~~~~~~aDiIil~v~~~~ 83 (274)
|+++||||||+|+||..++..|.+. ++ ++. ++ +|++++++. .|+. ..++..+. .++|+||+|+|+..
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~----elvav~-d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~ 77 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDF----EIAGIV-RRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSRE 77 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTE----EEEEEE-CC----------CCTTSCEESSGGGS-SSCCEEEECSCHHH
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCC----EEEEEE-cCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchh
Confidence 3467999999999999999999874 44 666 67 999987664 5543 23344443 68999999999888
Q ss_pred HHHHHHHhccccCCCCEEEEe
Q 024016 84 VKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~ 104 (274)
..+...... ..|+.+++.
T Consensus 78 h~~~~~~al---~aG~~Vi~e 95 (304)
T 3bio_A 78 VERTALEIL---KKGICTADS 95 (304)
T ss_dssp HHHHHHHHH---TTTCEEEEC
T ss_pred hHHHHHHHH---HcCCeEEEC
Confidence 777665543 456667753
No 192
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.61 E-value=1.2e-07 Score=85.82 Aligned_cols=90 Identities=12% Similarity=0.138 Sum_probs=71.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCccc-HHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-VKD 86 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~-~~~ 86 (274)
...++|+|||+|.||..+++.+...|. +|+++ ++++.+.+...+.|+.. .+..++++++|+||.|++... +.
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga----~Viv~-d~~~~~~~~A~~~Ga~~-~~l~e~l~~aDvVi~atgt~~~i~- 344 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGA----RVSVT-EIDPINALQAMMEGFDV-VTVEEAIGDADIVVTATGNKDIIM- 344 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECSSSSCSBC-
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCEE-ecHHHHHhCCCEEEECCCCHHHHH-
Confidence 345799999999999999999999998 99999 99999887777788875 356778889999999997544 32
Q ss_pred HHHHhccccCCCCEEEEecC
Q 024016 87 VAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~ 106 (274)
.+....++++.+++++..
T Consensus 345 --~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 345 --LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp --HHHHHHSCTTCEEEECSS
T ss_pred --HHHHHhcCCCcEEEEeCC
Confidence 123334678888887754
No 193
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.60 E-value=2.2e-07 Score=80.04 Aligned_cols=95 Identities=11% Similarity=0.117 Sum_probs=68.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--------c--C--ceeccCchhhccCCCEEE
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--------I--G--VKVLSDNNAVVEYSDVVV 76 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~--------~--g--~~~~~~~~~~~~~aDiIi 76 (274)
.++||+|||+|.||.+++..|...|+. +|.++ |+++++++.... . . ++.+++. +.+++||+||
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~---~v~L~-Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi 77 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLG---DVVLF-DIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVI 77 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCC---EEEEE-CSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC---eEEEE-eCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEE
Confidence 357999999999999999999999873 59999 999877653221 1 2 2333555 7789999999
Q ss_pred Eee--Cc--c-----------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 77 FSV--KP--Q-----------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 77 l~v--~~--~-----------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+++ |. . .++++.+++..+. |+.+++..+++..
T Consensus 78 ~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~ 130 (322)
T 1t2d_A 78 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVD 130 (322)
T ss_dssp ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHH
T ss_pred EeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChH
Confidence 998 31 1 2556666676664 7777776666544
No 194
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.59 E-value=3.7e-07 Score=78.48 Aligned_cols=97 Identities=15% Similarity=0.167 Sum_probs=67.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH----H-c-----CceeccCchhhccCCCEEEEe
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE----S-I-----GVKVLSDNNAVVEYSDVVVFS 78 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~----~-~-----g~~~~~~~~~~~~~aDiIil~ 78 (274)
+.+||+|||+|.||.+++..|...|.. .+|.++ |+++++.+... . . ..++..+..+.+++||+||++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~--~ev~l~-Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia 81 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIA--DEIVLI-DANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVIC 81 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCC--CEEEEE-eCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEc
Confidence 357999999999999999999888753 379999 99987654322 1 1 233444556778999999999
Q ss_pred eCcc----------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 79 VKPQ----------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 79 v~~~----------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
.+.. .+.++.+.+..+. |+..++-.++++.
T Consensus 82 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNPv~ 127 (316)
T 1ldn_A 82 AGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPVD 127 (316)
T ss_dssp CSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHH
T ss_pred CCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCchH
Confidence 7532 2344555555553 6666666666554
No 195
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.58 E-value=6e-07 Score=77.19 Aligned_cols=98 Identities=14% Similarity=0.203 Sum_probs=68.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHH----HH------cCceeccCchhhccCCCEEEE
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAF----ES------IGVKVLSDNNAVVEYSDVVVF 77 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l----~~------~g~~~~~~~~~~~~~aDiIil 77 (274)
|+.+||+|||+|.+|.+++..|...|++ .+|.++ |+++++++.. .. ..+++..+..+++++||+||+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~--~ei~L~-Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi 80 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIV--DELVII-DLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVI 80 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSC--SEEEEE-CSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEE
Confidence 3457999999999999999999988853 389999 9998766432 11 123444456778999999999
Q ss_pred eeC-cc---------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 78 SVK-PQ---------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 78 ~v~-~~---------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+.+ |. .++++.+.+..+ .|+..++..++++.
T Consensus 81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv~ 127 (317)
T 3d0o_A 81 CAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNPVD 127 (317)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHH
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCcHH
Confidence 984 21 234444555555 57777777766554
No 196
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=98.58 E-value=2.8e-07 Score=80.73 Aligned_cols=90 Identities=9% Similarity=0.141 Sum_probs=65.1
Q ss_pred CCCCCCeEEEEcccHHHH-HHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC-ceeccCchhhccC--CCEEEEeeC
Q 024016 6 IPAESFILGFIGAGKMAE-SIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG-VKVLSDNNAVVEY--SDVVVFSVK 80 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~-~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g-~~~~~~~~~~~~~--aDiIil~v~ 80 (274)
.+|+++||||||+|.+|. .++..+...+. ++...+++++++++.+.+ .| ...++|..+++++ .|+|++|+|
T Consensus 22 ~Mm~~irvgiiG~G~~~~~~~~~~~~~~~~----~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 22 SMMDELRFAAVGLNHNHIYGQVNCLLRAGA----RLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp ----CCEEEEECCCSTTHHHHHHHHHHTTC----EEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCC
T ss_pred hhccCcEEEEECcCHHHHHHHHHHhhcCCc----EEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 346678999999999994 56777766676 765333999999988876 55 5677888888874 899999999
Q ss_pred cccHHHHHHHhccccCCCCEEE
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+....++..... ..|+-|+
T Consensus 98 ~~~H~~~~~~al---~aGkhVl 116 (361)
T 3u3x_A 98 SSERAELAIRAM---QHGKDVL 116 (361)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHHHH---HCCCeEE
Confidence 887666665443 3444444
No 197
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.57 E-value=5.4e-07 Score=77.52 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=71.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHHc-----CceeccCchhhccCCCEEEEee
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FESI-----GVKVLSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~----l~~~-----g~~~~~~~~~~~~~aDiIil~v 79 (274)
+.+||+|||+|.+|.+++..|...|+. .+|.++ |+++++++. +... .+++..+..+.+++||+||++.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~--~ev~L~-Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~ 82 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTA--NELVLI-DVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTA 82 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCS--SEEEEE-CCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcC
Confidence 347999999999999999999998863 379999 999876542 2221 2233334567789999999998
Q ss_pred Cccc----------------HHHHHHHhccccCCCCEEEEecCCCCH--HHHHHh--hCCCceEEE
Q 024016 80 KPQV----------------VKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEW--TGHSRFIRV 125 (274)
Q Consensus 80 ~~~~----------------~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~--~~~~~~~~~ 125 (274)
+... ++++.+.+..+ .|+.+++..++++.. ..+.+. +|..+++..
T Consensus 83 g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 83 GANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp CC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred CCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCcHHHHHHHHHHHcCCCHHHEecc
Confidence 5221 45566666665 577777766665443 223333 344466654
No 198
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.57 E-value=1.7e-07 Score=81.62 Aligned_cols=81 Identities=10% Similarity=0.211 Sum_probs=61.5
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCc-eeccCchhhcc--CCCEEEEeeCccc
Q 024016 9 ESFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSVKPQV 83 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~-~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDiIil~v~~~~ 83 (274)
+++||||||+|.||.. ++..+.+... .+|...++|++++++++++ .|+ .+++|..++++ +.|+|++|+|+..
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~~~---~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~ 98 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDAEN---CVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQ 98 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCSS---EEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGG
T ss_pred CccEEEEEcChHHHHHHHHHHHHhCCC---eEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCch
Confidence 4579999999999975 5666766432 1665333999999988877 776 57788888875 5799999999988
Q ss_pred HHHHHHHhc
Q 024016 84 VKDVAMQIR 92 (274)
Q Consensus 84 ~~~v~~~i~ 92 (274)
-.++.....
T Consensus 99 H~~~~~~al 107 (350)
T 4had_A 99 HIEWSIKAA 107 (350)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 766665443
No 199
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=98.57 E-value=1.8e-07 Score=85.02 Aligned_cols=79 Identities=18% Similarity=0.205 Sum_probs=63.6
Q ss_pred CCCCeEEEEcc----cHHHHHHHHHHHhC--CCCCCCcEE-EEeCCCHHHHHHHHH-cCc---eeccCchhhcc--CCCE
Q 024016 8 AESFILGFIGA----GKMAESIAKGVAKS--GVLPPDRIC-TAVHSNLKRRDAFES-IGV---KVLSDNNAVVE--YSDV 74 (274)
Q Consensus 8 ~~~~~IgiIG~----G~mG~~~a~~L~~~--g~~~~~~v~-v~~~r~~~~~~~l~~-~g~---~~~~~~~~~~~--~aDi 74 (274)
|+++||||||+ |.||..++..|.+. ++ +|+ ++ ++++++++.+.+ .|+ ..+++..++++ +.|+
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~----~lvav~-d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~ 111 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQF----QIVALY-NPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDM 111 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTE----EEEEEE-CSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSE
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCe----EEEEEE-eCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCE
Confidence 56689999999 99999999999885 44 664 66 999999988876 565 37788888875 6899
Q ss_pred EEEeeCcccHHHHHHHh
Q 024016 75 VVFSVKPQVVKDVAMQI 91 (274)
Q Consensus 75 Iil~v~~~~~~~v~~~i 91 (274)
|++|+|+....+++...
T Consensus 112 V~I~tp~~~H~~~~~~a 128 (479)
T 2nvw_A 112 IVVSVKVPEHYEVVKNI 128 (479)
T ss_dssp EEECSCHHHHHHHHHHH
T ss_pred EEEcCCcHHHHHHHHHH
Confidence 99999988766665543
No 200
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.56 E-value=4.5e-08 Score=73.98 Aligned_cols=96 Identities=14% Similarity=0.211 Sum_probs=70.8
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHH-HHHHHHcCceeccCchhhccCCCEEEEeeCcccH
Q 024016 10 SFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNLKR-RDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVV 84 (274)
Q Consensus 10 ~~~IgiIG~----G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~-~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~ 84 (274)
..+|+|||+ |++|..++++|.+.|| + +| ++++.+ .+.+ .|..++.+..++.+..|++++++|++.+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~----~--v~-~vnp~~~~~~i--~G~~~~~sl~el~~~vDlavi~vp~~~~ 83 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGY----R--VL-PVNPRFQGEEL--FGEEAVASLLDLKEPVDILDVFRPPSAL 83 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTC----E--EE-EECGGGTTSEE--TTEECBSSGGGCCSCCSEEEECSCHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCC----E--EE-EeCCCcccCcC--CCEEecCCHHHCCCCCCEEEEEeCHHHH
Confidence 468999999 8999999999999998 7 55 666664 2111 5888888888888889999999999988
Q ss_pred HHHHHHhccccCCCCEEEEecCCCCHHHHHHhh
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT 117 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~ 117 (274)
.++++++...- .+.+++. .|...+++.+..
T Consensus 84 ~~v~~~~~~~g-i~~i~~~--~g~~~~~~~~~a 113 (140)
T 1iuk_A 84 MDHLPEVLALR-PGLVWLQ--SGIRHPEFEKAL 113 (140)
T ss_dssp TTTHHHHHHHC-CSCEEEC--TTCCCHHHHHHH
T ss_pred HHHHHHHHHcC-CCEEEEc--CCcCHHHHHHHH
Confidence 88887766532 3345443 444445554444
No 201
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.56 E-value=5.7e-07 Score=77.46 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=69.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHH------cCceeccCchhhccCCCEEEEe
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FES------IGVKVLSDNNAVVEYSDVVVFS 78 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~----l~~------~g~~~~~~~~~~~~~aDiIil~ 78 (274)
+.+||+|||+|.||.+++..|...|+. .+|.++ |+++++++. |.. .++++.++..+.+++||+||++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~--~~l~l~-D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ 80 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGIT--DELVVI-DVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCIC 80 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--ceEEEE-ecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEe
Confidence 457999999999999999999998863 389999 999987664 433 1334445556788999999999
Q ss_pred eC----ccc------------HHHHHHHhccccCCCCEEEEecCCCC
Q 024016 79 VK----PQV------------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 79 v~----~~~------------~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
.. |.. ++++.+.+..+ .|+..++..++++.
T Consensus 81 ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNPvd 126 (326)
T 3pqe_A 81 AGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNPVD 126 (326)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHH
T ss_pred cccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCChHH
Confidence 73 211 23333445444 57778887777654
No 202
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.55 E-value=4.4e-07 Score=77.09 Aligned_cols=94 Identities=21% Similarity=0.281 Sum_probs=66.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHH----c--Cce--eccCchhhccCCCEEEEe
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FES----I--GVK--VLSDNNAVVEYSDVVVFS 78 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~----l~~----~--g~~--~~~~~~~~~~~aDiIil~ 78 (274)
|||+|||+|.||.+++..|...|+. .+|.+| |+++++++. +.. . ..+ ..++ .+++++||+||++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~--~~v~L~-D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV--DEIALV-DIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC--SEEEEE-CSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CeEEEE-ECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEEC
Confidence 6999999999999999999998873 379999 999987641 221 1 222 3345 7889999999999
Q ss_pred eC----cc------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 79 VK----PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 79 v~----~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
.. |. .++++.+.+..+ .|+.+++..++++.
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNPvd 122 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNPMD 122 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcch
Confidence 73 21 123344455555 67788887777654
No 203
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.54 E-value=1.5e-07 Score=81.36 Aligned_cols=108 Identities=18% Similarity=0.266 Sum_probs=78.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVKD 86 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~~ 86 (274)
...+++||||+|++|+.+++.+..-|. +|.+| +|.+.. ...+.++.. .+..+++++||+|.+++| ....+.
T Consensus 139 l~g~tvGIiG~G~IG~~va~~~~~fg~----~v~~~-d~~~~~--~~~~~~~~~-~~l~ell~~sDivslh~Plt~~T~~ 210 (334)
T 3kb6_A 139 LNRLTLGVIGTGRIGSRVAMYGLAFGM----KVLCY-DVVKRE--DLKEKGCVY-TSLDELLKESDVISLHVPYTKETHH 210 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCCH--HHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTTTT
T ss_pred ecCcEEEEECcchHHHHHHHhhcccCc----eeeec-CCccch--hhhhcCcee-cCHHHHHhhCCEEEEcCCCChhhcc
Confidence 345799999999999999999999898 99999 887542 333456654 478899999999999998 333444
Q ss_pred HH-HHhccccCCCCEEEEecCC--CCHHHHHHhhCCCceE
Q 024016 87 VA-MQIRPLLSRKKLLVSVAAG--VKLKDLQEWTGHSRFI 123 (274)
Q Consensus 87 v~-~~i~~~l~~~~~vis~~~g--~~~~~l~~~~~~~~~~ 123 (274)
++ .+....++++.++|.++=| +..+.|.+.+...++.
T Consensus 211 li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~ 250 (334)
T 3kb6_A 211 MINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp CBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred CcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCce
Confidence 44 2334457899999988744 3456666666533443
No 204
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=98.53 E-value=2.1e-07 Score=81.74 Aligned_cols=105 Identities=13% Similarity=0.274 Sum_probs=71.2
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeC
Q 024016 4 FPIPAESFILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVK 80 (274)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~ 80 (274)
||....+.||+|||+| +|...+..+.+. ++ ++...++|++++++.+.+ .|+..++|.++++++.|++++|+|
T Consensus 1 M~~~~~~~rv~VvG~G-~g~~h~~a~~~~~~~~----elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p 75 (372)
T 4gmf_A 1 MPSASPKQRVLIVGAK-FGEMYLNAFMQPPEGL----ELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVR 75 (372)
T ss_dssp ------CEEEEEECST-TTHHHHHTTSSCCTTE----EEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC
T ss_pred CCCCCCCCEEEEEehH-HHHHHHHHHHhCCCCe----EEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECC
Confidence 4555556799999999 899888877654 34 665333999999988877 899988999999999999999998
Q ss_pred cccH----HHHHHHhccccCCCCEEEEecCCCCHHHHHHhh
Q 024016 81 PQVV----KDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT 117 (274)
Q Consensus 81 ~~~~----~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~ 117 (274)
.... .++.... +..|+-|+ +-++++.++.++.+
T Consensus 76 ~~~h~~~~~~~a~~a---l~aGkhVl-~EKPl~~~ea~~l~ 112 (372)
T 4gmf_A 76 STVAGGAGTQLARHF---LARGVHVI-QEHPLHPDDISSLQ 112 (372)
T ss_dssp --CTTSHHHHHHHHH---HHTTCEEE-EESCCCHHHHHHHH
T ss_pred CcccchhHHHHHHHH---HHcCCcEE-EecCCCHHHHHHHH
Confidence 7653 3444332 33555555 34667766555443
No 205
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.53 E-value=3.8e-07 Score=78.49 Aligned_cols=99 Identities=16% Similarity=0.271 Sum_probs=67.4
Q ss_pred CCCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH----HHHH------cCcee--ccCchhhccCC
Q 024016 5 PIPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD----AFES------IGVKV--LSDNNAVVEYS 72 (274)
Q Consensus 5 ~~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~----~l~~------~g~~~--~~~~~~~~~~a 72 (274)
|-.|+++||+|||+|.||.+++..|...|+ . +|.+| |+++++++ ++.. ...++ +++ .+++++|
T Consensus 2 ~~~m~~~kI~viGaG~vG~~~a~~l~~~~~-~--~v~L~-Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d-~~a~~~a 76 (324)
T 3gvi_A 2 PGSMARNKIALIGSGMIGGTLAHLAGLKEL-G--DVVLF-DIAEGTPQGKGLDIAESSPVDGFDAKFTGAND-YAAIEGA 76 (324)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHHHTTC-C--EEEEE-CSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS-GGGGTTC
T ss_pred CCCCcCCEEEEECCCHHHHHHHHHHHhCCC-C--eEEEE-eCCchhHHHHHHHHhchhhhcCCCCEEEEeCC-HHHHCCC
Confidence 455778899999999999999999999987 2 89999 99987654 2222 13333 344 4789999
Q ss_pred CEEEEeeC----cc------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 73 DVVVFSVK----PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 73 DiIil~v~----~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
|+||++.. |. .++++.+.+..+ .|+.+++..++++.
T Consensus 77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvtNPvd 128 (324)
T 3gvi_A 77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICITNPLD 128 (324)
T ss_dssp SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHH
T ss_pred CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEecCCCcH
Confidence 99999973 21 133444455554 47778887777654
No 206
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.53 E-value=1.1e-07 Score=81.04 Aligned_cols=95 Identities=13% Similarity=0.144 Sum_probs=67.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCc---eec--cCchhhccCCCEEEEeeCc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGV---KVL--SDNNAVVEYSDVVVFSVKP 81 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~---~~~--~~~~~~~~~aDiIil~v~~ 81 (274)
...++|.|||+|.||.+++..|.+.|. .+|++| +|++++++.+.+ .+. .+. ++..+.+.++|+||.|+|.
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~---~~V~v~-nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAA---ERIDMA-NRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSV 214 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC---SEEEEE-CSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCT
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCC---CEEEEE-eCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCC
Confidence 346799999999999999999999985 289999 999999988876 333 221 2445667889999999986
Q ss_pred ccHHHHH-HHh-ccccCCCCEEEEecC
Q 024016 82 QVVKDVA-MQI-RPLLSRKKLLVSVAA 106 (274)
Q Consensus 82 ~~~~~v~-~~i-~~~l~~~~~vis~~~ 106 (274)
.....+- ..+ ...++++.++++++-
T Consensus 215 ~~~~~~~~~~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 215 GMHPRVEVQPLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp TCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 5321100 001 123567777777643
No 207
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.52 E-value=2.6e-07 Score=81.73 Aligned_cols=86 Identities=16% Similarity=0.228 Sum_probs=66.8
Q ss_pred CCeEEEEccc-HHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhcc--CCCEEEEeeCcccH
Q 024016 10 SFILGFIGAG-KMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFSVKPQVV 84 (274)
Q Consensus 10 ~~~IgiIG~G-~mG~~~a~~L~~~g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDiIil~v~~~~~ 84 (274)
++||||||+| .||..++..|.+... .++. ++ ++++++++.+.+ .|+..++|..++++ +.|+|++|+|+...
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~---~~l~av~-d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H 77 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPD---AQIVAAC-DPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFH 77 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTT---EEEEEEE-CSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCC---eEEEEEE-eCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHH
Confidence 4699999999 999999999987532 1555 56 999999887776 78888889988886 48999999999877
Q ss_pred HHHHHHhccccCCCCEEE
Q 024016 85 KDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vi 102 (274)
.++..... ..|+-|+
T Consensus 78 ~~~~~~al---~aGk~Vl 92 (387)
T 3moi_A 78 CEHVVQAS---EQGLHII 92 (387)
T ss_dssp HHHHHHHH---HTTCEEE
T ss_pred HHHHHHHH---HCCCcee
Confidence 66665543 3445454
No 208
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.51 E-value=2.8e-07 Score=81.80 Aligned_cols=89 Identities=12% Similarity=0.132 Sum_probs=68.4
Q ss_pred CCCCCeEEEEcccH---HHHHHHHHHHhCCCCCCCcEE--EEeCCCHHHHHHHHH-cCc---eeccCchhhccC------
Q 024016 7 PAESFILGFIGAGK---MAESIAKGVAKSGVLPPDRIC--TAVHSNLKRRDAFES-IGV---KVLSDNNAVVEY------ 71 (274)
Q Consensus 7 ~~~~~~IgiIG~G~---mG~~~a~~L~~~g~~~~~~v~--v~~~r~~~~~~~l~~-~g~---~~~~~~~~~~~~------ 71 (274)
+|+++||||||+|. ||...+..+...+. .++. ++ ++++++++.+.+ .|+ ..++|..+++++
T Consensus 9 ~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~---~~lva~v~-d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~ 84 (398)
T 3dty_A 9 IPQPIRWAMVGGGSQSQIGYIHRCAALRDNT---FVLVAGAF-DIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRAD 84 (398)
T ss_dssp SCSCEEEEEEECCTTCSSHHHHHHHHHGGGS---EEEEEEEC-CSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTT
T ss_pred ccCcceEEEEcCCccchhHHHHHHHHhhCCC---eEEEEEEe-CCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCC
Confidence 46678999999999 99999988877652 1665 56 999999988776 787 577888888764
Q ss_pred -CCEEEEeeCcccHHHHHHHhccccCCCCEEE
Q 024016 72 -SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 72 -aDiIil~v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
.|+|++|+|+....++..... ..|+-|+
T Consensus 85 ~vD~V~i~tp~~~H~~~~~~al---~aGkhVl 113 (398)
T 3dty_A 85 GIQAVSIATPNGTHYSITKAAL---EAGLHVV 113 (398)
T ss_dssp CCSEEEEESCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCCEEEECCCcHHHHHHHHHHH---HCCCeEE
Confidence 899999999887766665543 2455554
No 209
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.51 E-value=1.1e-06 Score=75.52 Aligned_cols=98 Identities=14% Similarity=0.193 Sum_probs=69.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c------CceeccCchhhccCCCEEEEee
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I------GVKVLSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~---~------g~~~~~~~~~~~~~aDiIil~v 79 (274)
+.+||+|||+|.+|.+++..|...+++ .+|.++ |+++++++.... . .+++..+..+.+++||+||++.
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~--~el~L~-Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~a 80 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIA--EEFVIV-DVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITA 80 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCC--CEEEEE-eCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECC
Confidence 347999999999999999999988863 379999 999887764221 1 2334445677899999999998
Q ss_pred Ccc----------------cHHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 80 KPQ----------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 80 ~~~----------------~~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
+.. .++++.+.+..+ .|+..++..++++..
T Consensus 81 g~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~~ 126 (318)
T 1ez4_A 81 GAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPVDI 126 (318)
T ss_dssp CC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcHHH
Confidence 421 233444555554 577777777776543
No 210
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.50 E-value=5e-07 Score=77.70 Aligned_cols=98 Identities=15% Similarity=0.238 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH----HHHH------cCceec-cCchhhccCCCEE
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD----AFES------IGVKVL-SDNNAVVEYSDVV 75 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~----~l~~------~g~~~~-~~~~~~~~~aDiI 75 (274)
.|+++||+|||+|.||.+++..|...|+ . +|.++ |+++++++ .+.. ...++. ++..+.+++||+|
T Consensus 2 ~m~~~kI~iiGaG~vG~~~a~~l~~~~~-~--~v~l~-Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvV 77 (321)
T 3p7m_A 2 AMARKKITLVGAGNIGGTLAHLALIKQL-G--DVVLF-DIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVV 77 (321)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTC-C--EEEEE-CSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-c--eEEEE-eCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEE
Confidence 3567899999999999999999999886 2 89999 99987754 2222 123332 3445788999999
Q ss_pred EEeeC----cc------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 76 VFSVK----PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 76 il~v~----~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
|++.. |. .++++.+.+..+ .|+.+++..++++.
T Consensus 78 Ii~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvd 126 (321)
T 3p7m_A 78 IVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN-CPNAFVICITNPLD 126 (321)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHH
T ss_pred EEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH-CCCcEEEEecCchH
Confidence 99962 21 133444555555 37777777766654
No 211
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.50 E-value=7.6e-07 Score=80.18 Aligned_cols=88 Identities=17% Similarity=0.194 Sum_probs=65.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH----cC---ceecc----Cchhhcc--C
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES----IG---VKVLS----DNNAVVE--Y 71 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~----~g---~~~~~----~~~~~~~--~ 71 (274)
+|+++||||||+|.||...+..|.+. ++ +|. ++ ++++++++.+.+ .| ...++ |..++++ +
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~~~~----~lvav~-d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~ 91 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARRDDV----EIVAFA-DPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKN 91 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTCTTE----EEEEEE-CSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTT
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhCCCc----EEEEEE-eCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCC
Confidence 45567999999999999999998874 44 654 66 999999887654 35 46677 8888886 5
Q ss_pred CCEEEEeeCcccHHHHHHHhccccCCCCEEE
Q 024016 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 72 aDiIil~v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
.|+|++|+|+....++..... ..|+-|+
T Consensus 92 vD~V~i~tp~~~h~~~~~~al---~aGkhV~ 119 (444)
T 2ixa_A 92 IDAVFVSSPWEWHHEHGVAAM---KAGKIVG 119 (444)
T ss_dssp CCEEEECCCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCEEEEcCCcHHHHHHHHHHH---HCCCeEE
Confidence 899999999887666655433 3455444
No 212
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.50 E-value=5.1e-07 Score=68.52 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=69.7
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHH
Q 024016 10 SFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (274)
Q Consensus 10 ~~~IgiIG~----G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~ 85 (274)
..+|+|||+ |++|..++++|.+.|| +|+ +.++.. +.+ .|+.++.+..++.+..|++++++|++.+.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~----~v~---~Vnp~~-~~i--~G~~~y~sl~~l~~~vDlvvi~vp~~~~~ 91 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGY----DVY---PVNPKY-EEV--LGRKCYPSVLDIPDKIEVVDLFVKPKLTM 91 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTC----EEE---EECTTC-SEE--TTEECBSSGGGCSSCCSEEEECSCHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCC----EEE---EECCCC-CeE--CCeeccCCHHHcCCCCCEEEEEeCHHHHH
Confidence 468999999 7999999999999998 754 445543 111 58888888888888899999999999999
Q ss_pred HHHHHhccccCCCCEEEEecCCCCHHHHHHhh
Q 024016 86 DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT 117 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~ 117 (274)
++++++...- .+.++ +..|...+.+.+..
T Consensus 92 ~vv~~~~~~g-i~~i~--~~~g~~~~~l~~~a 120 (144)
T 2d59_A 92 EYVEQAIKKG-AKVVW--FQYNTYNREASKKA 120 (144)
T ss_dssp HHHHHHHHHT-CSEEE--ECTTCCCHHHHHHH
T ss_pred HHHHHHHHcC-CCEEE--ECCCchHHHHHHHH
Confidence 9998766532 33343 33455445555444
No 213
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.49 E-value=1.3e-06 Score=75.07 Aligned_cols=97 Identities=18% Similarity=0.237 Sum_probs=68.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHH-----cCceeccCchhhccCCCEEEEee
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FES-----IGVKVLSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~----l~~-----~g~~~~~~~~~~~~~aDiIil~v 79 (274)
+.+||+|||+|.||++++..|...|+. .++.++ |+++++++- +.. .++++.++..+.+++||+||++.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~--~el~l~-D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~a 84 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIA--QEIGIV-DIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITA 84 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--CeEEEE-eCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECC
Confidence 567999999999999999999998874 389999 999887763 322 13445556677899999999986
Q ss_pred C----cc------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 80 K----PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 80 ~----~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
. |. .++++.+.+..+ .|+..++..++++.
T Consensus 85 g~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvvtNPvd 129 (326)
T 3vku_A 85 GAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANPVD 129 (326)
T ss_dssp CCC----------------CHHHHHHHHHTT-TCCSEEEECSSSHH
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEccCchH
Confidence 2 21 133444455554 46777777766654
No 214
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.48 E-value=5.1e-07 Score=80.45 Aligned_cols=91 Identities=18% Similarity=0.257 Sum_probs=65.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCC-----CCCCcEEEEeCCCHHHHHHHHH-cCc-eeccCchhhcc--CCCEEEEee
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGV-----LPPDRICTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~-----~~~~~v~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDiIil~v 79 (274)
+++||||||+|.||...+..+.+.+. ....+|...+|+++++++++.+ .|+ .+++|..++++ +.|+|++|+
T Consensus 25 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 25 ARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITS 104 (412)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECS
T ss_pred ccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECC
Confidence 45799999999999999888876431 0011455333999999988877 676 57788888875 579999999
Q ss_pred CcccHHHHHHHhccccCCCCEEE
Q 024016 80 KPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 80 ~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
|+..-.++..... ..|+-|+
T Consensus 105 p~~~H~~~~~~al---~aGkhVl 124 (412)
T 4gqa_A 105 PNHLHYTMAMAAI---AAGKHVY 124 (412)
T ss_dssp CGGGHHHHHHHHH---HTTCEEE
T ss_pred CcHHHHHHHHHHH---HcCCCeE
Confidence 9988766665443 3444444
No 215
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.48 E-value=4.2e-07 Score=81.17 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=66.8
Q ss_pred CCCCeEEEEcccH---HHHHHHHHHHhCCCCCCCcEE--EEeCCCHHHHHHHHH-cCc---eeccCchhhccC-------
Q 024016 8 AESFILGFIGAGK---MAESIAKGVAKSGVLPPDRIC--TAVHSNLKRRDAFES-IGV---KVLSDNNAVVEY------- 71 (274)
Q Consensus 8 ~~~~~IgiIG~G~---mG~~~a~~L~~~g~~~~~~v~--v~~~r~~~~~~~l~~-~g~---~~~~~~~~~~~~------- 71 (274)
|+++||||||+|. ||...+..+...+. .++. ++ +|++++++.+.+ .|+ ..++|.++++++
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~---~~lva~v~-d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~ 110 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDH---YELVAGAL-SSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNG 110 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSC---EEEEEEEC-CSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTC
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCC---cEEEEEEe-CCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCC
Confidence 4567999999999 99999888877652 1654 56 999999988776 677 577888888765
Q ss_pred CCEEEEeeCcccHHHHHHHhccccCCCCEEE
Q 024016 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 72 aDiIil~v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
.|+|++|+|+....++..... ..|+-|+
T Consensus 111 vD~V~I~tp~~~H~~~~~~al---~aGkhVl 138 (417)
T 3v5n_A 111 IEAVAIVTPNHVHYAAAKEFL---KRGIHVI 138 (417)
T ss_dssp CSEEEECSCTTSHHHHHHHHH---TTTCEEE
T ss_pred CcEEEECCCcHHHHHHHHHHH---hCCCeEE
Confidence 899999999887777665543 4555555
No 216
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=98.48 E-value=6e-06 Score=68.07 Aligned_cols=164 Identities=15% Similarity=0.212 Sum_probs=115.3
Q ss_pred cCceeccCchhhccCCCEEEEeeCccc-HHHHHHHhccccCCCCEEEEecCCCCHHHHHHh---hC--CCceEEEcCCc-
Q 024016 57 IGVKVLSDNNAVVEYSDVVVFSVKPQV-VKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQEW---TG--HSRFIRVMPNT- 129 (274)
Q Consensus 57 ~g~~~~~~~~~~~~~aDiIil~v~~~~-~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~---~~--~~~~~~~~p~~- 129 (274)
.|+++.+|..|+++++|++|+-+|-.. ..++++++.++++.|.+|.++ .++++-.+... ++ +..+.++||..
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nT-CTipp~~ly~~le~l~R~DvgIsS~HPaaV 205 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHA-CTIPTTKFAKIFKDLGREDLNITSYHPGCV 205 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEEC-SSSCHHHHHHHHHHTTCTTSEEEECBCSSC
T ss_pred cCcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecc-cCCCHHHHHHHHHHhCcccCCeeccCCCCC
Confidence 377888888999999999999999655 778999999999999876655 55665444333 33 35677888864
Q ss_pred HHhhcCCceEEecCCCCCHHHHHHHHHHhhhcCCe-EEcCccchhhHHHhhcchHHHHHHHHHHHHHH---H-HHcCCCH
Q 024016 130 PSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKI-WRADEKLFDAITGLSGSGPAYIFLAIEALADG---G-VAAGLPR 204 (274)
Q Consensus 130 ~~~~~~g~~~i~~~~~~~~~~~~~v~~ll~~~g~~-~~~~e~~~~~~~a~~~~~~~~~~~~~~~l~e~---~-~~~Gl~~ 204 (274)
|.. .|.....- .-.++++++++.++.+..|+. +.++.+....+.-+ +....+....++.+. . +-.|-+.
T Consensus 206 Pgt--~Gq~~~g~-~yAtEEqIeklveLaksa~k~ay~vPAdl~SpV~DM---gs~vTAv~~AGiL~Y~~~vtkIlgAP~ 279 (358)
T 2b0j_A 206 PEM--KGQVYIAE-GYASEEAVNKLYEIGKIARGKAFKMPANLIGPVCDM---CSAVTATVYAGLLAYRDAVTKILGAPA 279 (358)
T ss_dssp TTT--CCCEEEEE-SSSCHHHHHHHHHHHHHHHSCEEEEEHHHHHHHHST---THHHHHHHHHHHHHHHHHHHTTSCCCH
T ss_pred CCC--CCcccccc-ccCCHHHHHHHHHHHHHhCCCeEecchhhccchhhh---HHHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence 332 34333322 234789999999999999976 77777555444333 344444444454443 2 3478899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Q 024016 205 ELALGLASQTVLGAASMVTKSGK 227 (274)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~ 227 (274)
+.+...+..++...+.+++++|.
T Consensus 280 ~mie~q~~esL~tiasLve~~GI 302 (358)
T 2b0j_A 280 DFAQMMADEALTQIHNLMKEKGI 302 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhH
Confidence 98888899999888888887664
No 217
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.48 E-value=8.4e-07 Score=77.03 Aligned_cols=86 Identities=14% Similarity=0.224 Sum_probs=66.4
Q ss_pred CCCeEEEEccc-HHHHHHHHHHHhC--CCCCCCcE-EEEeCCCHHHHHHHHH-cCc-eeccCchhhcc--CCCEEEEeeC
Q 024016 9 ESFILGFIGAG-KMAESIAKGVAKS--GVLPPDRI-CTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSVK 80 (274)
Q Consensus 9 ~~~~IgiIG~G-~mG~~~a~~L~~~--g~~~~~~v-~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDiIil~v~ 80 (274)
+++||||||+| .||...+..|.+. ++ ++ .++ ++++++++.+.+ .|+ ..++|..++++ +.|+|++|+|
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~----~lvav~-d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 91 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLF----EITAVT-SRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLP 91 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTE----EEEEEE-CSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCC
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCce----EEEEEE-cCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 35799999999 8999999999876 33 55 466 999999988776 676 67888888875 5899999999
Q ss_pred cccHHHHHHHhccccCCCCEEE
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+....++..... ..|+-|+
T Consensus 92 ~~~H~~~~~~al---~aGkhVl 110 (340)
T 1zh8_A 92 VELNLPFIEKAL---RKGVHVI 110 (340)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred chHHHHHHHHHH---HCCCcEE
Confidence 887766665543 3455444
No 218
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.47 E-value=1.1e-06 Score=77.86 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=70.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCccc-H-
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV-V- 84 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~-~- 84 (274)
....++++|||+|.+|..+|+.+...|. +|+++ ++++.+.......|..+. +..++++.+|+|++++.... +
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa----~Viv~-d~dp~~a~~A~~~G~~vv-~LeElL~~ADIVv~atgt~~lI~ 317 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA----RVKVT-EVDPICALQAAMDGFEVV-TLDDAASTADIVVTTTGNKDVIT 317 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHTTCEEC-CHHHHGGGCSEEEECCSSSSSBC
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-eCCcchhhHHHhcCceec-cHHHHHhhCCEEEECCCCccccC
Confidence 3456899999999999999999999998 99999 999977655555777664 67889999999999875332 2
Q ss_pred HHHHHHhccccCCCCEEEEecCC
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~g 107 (274)
.+.+. .++++.++|++.-+
T Consensus 318 ~e~l~----~MK~GAILINvGRg 336 (464)
T 3n58_A 318 IDHMR----KMKDMCIVGNIGHF 336 (464)
T ss_dssp HHHHH----HSCTTEEEEECSSS
T ss_pred HHHHh----cCCCCeEEEEcCCC
Confidence 33333 36788999987543
No 219
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.47 E-value=3.1e-07 Score=81.16 Aligned_cols=90 Identities=11% Similarity=0.097 Sum_probs=69.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC-cccHH-
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK-PQVVK- 85 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~-~~~~~- 85 (274)
...++|+|+|+|.+|..+++.|...|. +|+++ ++++.+.......|... .+..++++.+|+|++|.. ...+.
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga----~Viv~-D~dp~ra~~A~~~G~~v-~~Leeal~~ADIVi~atgt~~lI~~ 291 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGS----IVYVT-EIDPICALQACMDGFRL-VKLNEVIRQVDIVITCTGNKNVVTR 291 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCSCSBCH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCC----EEEEE-eCChhhhHHHHHcCCEe-ccHHHHHhcCCEEEECCCCcccCCH
Confidence 345799999999999999999999998 99999 99997766555577655 467889999999999853 22232
Q ss_pred HHHHHhccccCCCCEEEEecCC
Q 024016 86 DVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~g 107 (274)
+.+. .++++.++|++..+
T Consensus 292 e~l~----~MK~gailINvgrg 309 (435)
T 3gvp_A 292 EHLD----RMKNSCIVCNMGHS 309 (435)
T ss_dssp HHHH----HSCTTEEEEECSST
T ss_pred HHHH----hcCCCcEEEEecCC
Confidence 4443 36788889887654
No 220
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.47 E-value=1.1e-06 Score=74.87 Aligned_cols=95 Identities=16% Similarity=0.266 Sum_probs=66.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHH---HHHHHH---cCceeccCchhhccCCCEEEEeeCc--
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKR---RDAFES---IGVKVLSDNNAVVEYSDVVVFSVKP-- 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~---~~~l~~---~g~~~~~~~~~~~~~aDiIil~v~~-- 81 (274)
++||+|||+|.||..++..|+..|+. .+|.++ |++++. +..+.. ..++...+. +.+++||+||++...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~--~ev~L~-Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~ 89 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIA--DRLVLL-DLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLG 89 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC--SEEEEE-CCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCC--CEEEEE-cCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCC
Confidence 47999999999999999999998863 379999 998742 223332 234555565 678999999999721
Q ss_pred -------------ccHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 82 -------------QVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 82 -------------~~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
..++++++++..+. |+.+++..++++.
T Consensus 90 pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 90 SSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVE 129 (303)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHH
Confidence 12556666676664 7778777777654
No 221
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.46 E-value=1.2e-06 Score=75.00 Aligned_cols=95 Identities=21% Similarity=0.301 Sum_probs=66.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH----HHHH------cCceec-cCchhhccCCCEEEEee
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD----AFES------IGVKVL-SDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~----~l~~------~g~~~~-~~~~~~~~~aDiIil~v 79 (274)
|||+|||+|.||.+++..|...|+. .+|.++ |+++++++ ++.. ....+. ++..+.+++||+||++.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~--~el~l~-D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~a 77 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVA--KEVVMV-DIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITA 77 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS--SEEEEE-CSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECC
Confidence 6999999999999999999998863 389999 99987754 2222 133443 35677899999999997
Q ss_pred C-c---c------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 80 K-P---Q------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 80 ~-~---~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
. | . .++++.+.+..+ .|+.+++..++++.
T Consensus 78 g~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvd 122 (314)
T 3nep_X 78 GLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPLD 122 (314)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSHH
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCchh
Confidence 3 2 1 123333445554 57778887777654
No 222
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.46 E-value=7.3e-08 Score=81.14 Aligned_cols=93 Identities=16% Similarity=0.175 Sum_probs=64.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC-ceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIG-VKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g-~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
+.+++.|||+|.||.+++..|.+.|. .+|+++ +|++++++.+.+.. .....+..+.+.++|+||-|||......+
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~---~~v~v~-~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~ 191 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVR---PTLTVA-NRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNT 191 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCC---SCCEEE-CSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC---CEEEEE-eCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCC
Confidence 45789999999999999999999996 379999 99999887766421 11234455667889999999986533221
Q ss_pred HHHh-ccccCCCCEEEEec
Q 024016 88 AMQI-RPLLSRKKLLVSVA 105 (274)
Q Consensus 88 ~~~i-~~~l~~~~~vis~~ 105 (274)
-..+ ...++++.++++++
T Consensus 192 ~~~l~~~~l~~~~~V~D~v 210 (277)
T 3don_A 192 DSVISLNRLASHTLVSDIV 210 (277)
T ss_dssp CCSSCCTTCCSSCEEEESC
T ss_pred cCCCCHHHcCCCCEEEEec
Confidence 1011 23467888888875
No 223
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.46 E-value=8.7e-07 Score=77.29 Aligned_cols=84 Identities=17% Similarity=0.266 Sum_probs=62.4
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhccC--CCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEY--SDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~-~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~--aDiIil~v~~~ 82 (274)
+++||||||+|.||.. .+..+.+. ++ +|. ++ ++++++++ .+ .++..++|..+++++ .|+|++|+|+.
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~----~l~av~-d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 78 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTPGL----ELAGVS-SSDASKVH--ADWPAIPVVSDPQMLFNDPSIDLIVIPTPND 78 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTSTTE----EEEEEE-CSCHHHHH--TTCSSCCEESCHHHHHHCSSCCEEEECSCTT
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCCCc----EEEEEE-CCCHHHHH--hhCCCCceECCHHHHhcCCCCCEEEEeCChH
Confidence 4579999999999997 67777665 44 665 66 99998876 23 467778888888865 89999999988
Q ss_pred cHHHHHHHhccccCCCCEEE
Q 024016 83 VVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vi 102 (274)
...++..... ..|+-|+
T Consensus 79 ~H~~~~~~al---~aGkhV~ 95 (352)
T 3kux_A 79 THFPLAQSAL---AAGKHVV 95 (352)
T ss_dssp THHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHH---HCCCcEE
Confidence 7766655433 3455454
No 224
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.46 E-value=1e-06 Score=77.30 Aligned_cols=95 Identities=17% Similarity=0.240 Sum_probs=66.3
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhcc--CCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVE--YSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~-~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~--~aDiIil~v~~~ 82 (274)
+++||||||+|.||.. .+..+.+. ++ +|. ++ ++++++++ .+ .++..++|..++++ +.|+|++|+|+.
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~--~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGL----NLAFVA-SRDEEKVK--RDLPDVTVIASPEAAVQHPDVDLVVIASPNA 78 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTE----EEEEEE-CSCHHHHH--HHCTTSEEESCHHHHHTCTTCSEEEECSCGG
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCe----EEEEEE-cCCHHHHH--hhCCCCcEECCHHHHhcCCCCCEEEEeCChH
Confidence 4579999999999997 66666654 44 665 66 99998765 23 46778889999887 789999999988
Q ss_pred cHHHHHHHhccccCCCCEEEEecCC--CCHHHHH
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAAG--VKLKDLQ 114 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~g--~~~~~l~ 114 (274)
...++..... ..|+-|+. -++ .+.+..+
T Consensus 79 ~H~~~~~~al---~aGk~Vl~-EKPla~~~~e~~ 108 (364)
T 3e82_A 79 THAPLARLAL---NAGKHVVV-DKPFTLDMQEAR 108 (364)
T ss_dssp GHHHHHHHHH---HTTCEEEE-CSCSCSSHHHHH
T ss_pred HHHHHHHHHH---HCCCcEEE-eCCCcCCHHHHH
Confidence 7766665433 34555553 343 3444433
No 225
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.44 E-value=7e-07 Score=78.68 Aligned_cols=97 Identities=20% Similarity=0.214 Sum_probs=64.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCC----CCCCCcEEEEeCCCHHHHHHHHH-cCc-eeccCchhhcc--CCCEEEEee
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSG----VLPPDRICTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVFSV 79 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g----~~~~~~v~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDiIil~v 79 (274)
|++.||||||+|.||..-+..+.+.. ..+..+|+..+|+++++++++.+ .|+ .+++|..++++ +.|+|++|+
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Iat 102 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTT 102 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECS
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECC
Confidence 56679999999999998777664421 01122555444999999988877 676 57788888875 579999999
Q ss_pred CcccHHHHHHHhccccCCCCEEEEecCCC
Q 024016 80 KPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 80 ~~~~~~~v~~~i~~~l~~~~~vis~~~g~ 108 (274)
|+..-.++..... ..|+-|+ +-+++
T Consensus 103 P~~~H~~~a~~al---~aGkhVl-~EKPl 127 (393)
T 4fb5_A 103 PNQFHAEMAIAAL---EAGKHVW-CEKPM 127 (393)
T ss_dssp CGGGHHHHHHHHH---HTTCEEE-ECSCS
T ss_pred ChHHHHHHHHHHH---hcCCeEE-EccCC
Confidence 9988766665443 2454444 33443
No 226
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.44 E-value=1.9e-06 Score=73.85 Aligned_cols=95 Identities=20% Similarity=0.243 Sum_probs=67.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c------CceeccCchhhccCCCEEEEeeC-
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I------GVKVLSDNNAVVEYSDVVVFSVK- 80 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~---~------g~~~~~~~~~~~~~aDiIil~v~- 80 (274)
|||+|||+|.+|.+++..|...+.. .+|.++ |+++++++.... . .+++..+..+++++||+||++.+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~--~el~L~-Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~ 77 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVA--REVVLV-DLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGV 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC--SEEEEE-CSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC--CEEEEE-eCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCC
Confidence 6999999999999999999988753 389999 999887764221 1 23343345777999999999873
Q ss_pred cc---------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 81 PQ---------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 81 ~~---------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+. .++++.+.+..+ .|+..++..++++.
T Consensus 78 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~ 120 (310)
T 2xxj_A 78 AQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPVD 120 (310)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred CCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCchH
Confidence 21 133444555555 57777777777654
No 227
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.44 E-value=3.5e-07 Score=82.26 Aligned_cols=78 Identities=13% Similarity=0.221 Sum_probs=62.4
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHhC--CCCCCCcE-EEEeCCCHHHHHHHHH-cCce---eccCchhhcc--CCCEE
Q 024016 9 ESFILGFIGA----GKMAESIAKGVAKS--GVLPPDRI-CTAVHSNLKRRDAFES-IGVK---VLSDNNAVVE--YSDVV 75 (274)
Q Consensus 9 ~~~~IgiIG~----G~mG~~~a~~L~~~--g~~~~~~v-~v~~~r~~~~~~~l~~-~g~~---~~~~~~~~~~--~aDiI 75 (274)
+++||||||+ |.||..++..|.+. ++ +| .++ ++++++++.+.+ .|+. .+++..++++ +.|+|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~----~lvav~-d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V 93 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQF----QITALY-SPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMI 93 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTE----EEEEEE-CSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEE
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCe----EEEEEE-eCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEE
Confidence 4579999999 99999999999886 44 65 466 999999888776 5654 7788888876 68999
Q ss_pred EEeeCcccHHHHHHHh
Q 024016 76 VFSVKPQVVKDVAMQI 91 (274)
Q Consensus 76 il~v~~~~~~~v~~~i 91 (274)
++|+|+....+++...
T Consensus 94 ~i~tp~~~H~~~~~~a 109 (438)
T 3btv_A 94 VIAIQVASHYEVVMPL 109 (438)
T ss_dssp EECSCHHHHHHHHHHH
T ss_pred EEeCCcHHHHHHHHHH
Confidence 9999988766655443
No 228
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.43 E-value=1.3e-06 Score=74.87 Aligned_cols=93 Identities=19% Similarity=0.177 Sum_probs=64.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH---c-------C--ceeccCchhhccCCCEEEEe
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES---I-------G--VKVLSDNNAVVEYSDVVVFS 78 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~---~-------g--~~~~~~~~~~~~~aDiIil~ 78 (274)
+||+|||+|.||.+++..|...|++ +|.++ |+++++++.... . . ++.+++. +.+++||+||++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~---~v~L~-Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a 77 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELG---DIVLL-DIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVT 77 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS---EEEEE-CSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC---eEEEE-eCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEc
Confidence 6999999999999999999999863 68899 998876643221 1 2 2233455 778999999999
Q ss_pred eC-c---------------ccHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 79 VK-P---------------QVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 79 v~-~---------------~~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+. | ..++++.+.+..+- |+.+++-.++++.
T Consensus 78 ~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv~ 123 (309)
T 1ur5_A 78 SGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPLD 123 (309)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCchH
Confidence 83 1 12345555666553 7777766666544
No 229
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.43 E-value=9e-07 Score=77.89 Aligned_cols=94 Identities=12% Similarity=0.107 Sum_probs=65.6
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCC----CCCcEEEEeCCCHHHHHHHHH-cCc-eeccCchhhcc--CCCEEEE
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVL----PPDRICTAVHSNLKRRDAFES-IGV-KVLSDNNAVVE--YSDVVVF 77 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~----~~~~v~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~--~aDiIil 77 (274)
+.|++.||||||+|.||...+..+.+...+ ...+|...+++++++++.+.+ .|+ .+++|..++++ +.|+|++
T Consensus 2 ~~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I 81 (390)
T 4h3v_A 2 NAMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDV 81 (390)
T ss_dssp --CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEE
T ss_pred CCCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEE
Confidence 456667999999999999888887653210 001454333999999988876 676 56788888876 4799999
Q ss_pred eeCcccHHHHHHHhccccCCCCEEE
Q 024016 78 SVKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 78 ~v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
|+|+....++..... ..|+-|+
T Consensus 82 ~tP~~~H~~~~~~al---~aGkhVl 103 (390)
T 4h3v_A 82 CTPGDSHAEIAIAAL---EAGKHVL 103 (390)
T ss_dssp CSCGGGHHHHHHHHH---HTTCEEE
T ss_pred eCChHHHHHHHHHHH---HcCCCce
Confidence 999888766665433 2444444
No 230
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.40 E-value=2.7e-06 Score=73.10 Aligned_cols=97 Identities=12% Similarity=-0.030 Sum_probs=69.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHH----HHc-------CceeccCchhhccCCCEEEE
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAF----ESI-------GVKVLSDNNAVVEYSDVVVF 77 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l----~~~-------g~~~~~~~~~~~~~aDiIil 77 (274)
..+||+|||+|.||.+++..|...|++. +|.++ |+++++++.. ... .+...++.++ +++||+||+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~--ev~L~-Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIi 95 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLAD--EVALV-DVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVI 95 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCS--EEEEE-CSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCC--eEEEE-ECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEE
Confidence 3579999999999999999999988643 79999 9998776532 210 1223445554 899999999
Q ss_pred eeC-c---------------ccHHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 78 SVK-P---------------QVVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 78 ~v~-~---------------~~~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
+.. | ..++++.+++..+ .|+..++..++++..
T Consensus 96 taG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPvdi 143 (330)
T 3ldh_A 96 TAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELGTD 143 (330)
T ss_dssp CCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHHH
T ss_pred eCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCccHH
Confidence 862 1 1244555666666 678888878776553
No 231
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.38 E-value=1.9e-06 Score=75.26 Aligned_cols=84 Identities=12% Similarity=0.168 Sum_probs=61.4
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHHc-CceeccCchhhcc--CCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFESI-GVKVLSDNNAVVE--YSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~-~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~~-g~~~~~~~~~~~~--~aDiIil~v~~~ 82 (274)
+++||||||+|.||.. .+..+.+. ++ +|. ++ ++++++.. .+. ++..++|..++++ +.|+|++|+|+.
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEY----QISKIM-TSRTEEVK--RDFPDAEVVHELEEITNDPAIELVIVTTPSG 76 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTE----EEEEEE-CSCHHHHH--HHCTTSEEESSTHHHHTCTTCCEEEECSCTT
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCe----EEEEEE-cCCHHHHH--hhCCCCceECCHHHHhcCCCCCEEEEcCCcH
Confidence 5679999999999997 67666554 44 665 55 99987632 233 6778889999887 689999999988
Q ss_pred cHHHHHHHhccccCCCCEEE
Q 024016 83 VVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vi 102 (274)
...++..... ..|+-|+
T Consensus 77 ~H~~~~~~al---~aGkhVl 93 (358)
T 3gdo_A 77 LHYEHTMACI---QAGKHVV 93 (358)
T ss_dssp THHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHH---HcCCeEE
Confidence 7766665443 3455555
No 232
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=98.38 E-value=3e-07 Score=77.13 Aligned_cols=102 Identities=17% Similarity=0.146 Sum_probs=69.0
Q ss_pred CCCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH-----HHHHH--cCceeccCchhhccCCCEEEEe
Q 024016 7 PAESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR-----DAFES--IGVKVLSDNNAVVEYSDVVVFS 78 (274)
Q Consensus 7 ~~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~-----~~l~~--~g~~~~~~~~~~~~~aDiIil~ 78 (274)
-|+++||+|+| +|+||+.+++.+.+... .++...++|++... ..+.. .|+.+.++..+++.++|+||-+
T Consensus 4 ~M~mikV~V~Ga~G~MG~~i~~~l~~~~~---~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDf 80 (272)
T 4f3y_A 4 SMSSMKIAIAGASGRMGRMLIEAVLAAPD---ATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDF 80 (272)
T ss_dssp --CCEEEEESSTTSHHHHHHHHHHHHCTT---EEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEEC
T ss_pred CccccEEEEECCCCHHHHHHHHHHHhCCC---CEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEc
Confidence 36678999999 89999999999886532 15554338874321 11111 2566778888888899999999
Q ss_pred eCcccHHHHHHHhccccCCCCEEEEecCCCCHHHHH
Q 024016 79 VKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQ 114 (274)
Q Consensus 79 v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~ 114 (274)
++|+...+.+..... .|.-+|..+.|.+.+.++
T Consensus 81 T~p~a~~~~~~~al~---~G~~vVigTTG~s~~~~~ 113 (272)
T 4f3y_A 81 TLPEGTLVHLDAALR---HDVKLVIGTTGFSEPQKA 113 (272)
T ss_dssp SCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHH
T ss_pred CCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHH
Confidence 999887777765543 344566556677765443
No 233
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.38 E-value=1e-06 Score=79.16 Aligned_cols=113 Identities=12% Similarity=0.249 Sum_probs=76.1
Q ss_pred CCeEEEEcccHH-HHHHHHHHHhC--CCCCCCcEEEEeCCCH--HHHHHHHH--------c--C--ceeccCchhhccCC
Q 024016 10 SFILGFIGAGKM-AESIAKGVAKS--GVLPPDRICTAVHSNL--KRRDAFES--------I--G--VKVLSDNNAVVEYS 72 (274)
Q Consensus 10 ~~~IgiIG~G~m-G~~~a~~L~~~--g~~~~~~v~v~~~r~~--~~~~~l~~--------~--g--~~~~~~~~~~~~~a 72 (274)
.+||+|||+|.+ |.+++..|+++ +. +..+|.+| |+++ ++++.... . . +..++|..+++++|
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l-~~~ev~L~-Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gA 84 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHEL-PVGELWLV-DIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGA 84 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTC-CEEEEEEE-CCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCC-CCCEEEEE-EcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCC
Confidence 469999999999 88888888873 22 22389999 9999 77654211 1 2 23345666889999
Q ss_pred CEEEEeeCccc------------------------------------HHHHHHHhccccCCCCEEEEecCCCCH--HHHH
Q 024016 73 DVVVFSVKPQV------------------------------------VKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQ 114 (274)
Q Consensus 73 DiIil~v~~~~------------------------------------~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~ 114 (274)
|+||++++... +.++++.+..+ .|+..++..++++.. ..+.
T Consensus 85 D~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~-~P~a~ii~~tNPvdivT~a~~ 163 (450)
T 1s6y_A 85 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEEL-CPDAWLINFTNPAGMVTEAVL 163 (450)
T ss_dssp SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHHHHHHHHH
T ss_pred CEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHH
Confidence 99999998532 34444555554 588888888887653 3444
Q ss_pred HhhCCCceEEE
Q 024016 115 EWTGHSRFIRV 125 (274)
Q Consensus 115 ~~~~~~~~~~~ 125 (274)
+..|..++++.
T Consensus 164 k~~p~~rViG~ 174 (450)
T 1s6y_A 164 RYTKQEKVVGL 174 (450)
T ss_dssp HHCCCCCEEEC
T ss_pred HhCCCCCEEEe
Confidence 55554466654
No 234
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.37 E-value=7e-07 Score=78.65 Aligned_cols=93 Identities=17% Similarity=0.242 Sum_probs=67.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCcee------ccCchhhccCCCEEEEeeC
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKV------LSDNNAVVEYSDVVVFSVK 80 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~------~~~~~~~~~~aDiIil~v~ 80 (274)
...++|+|||+|.+|..+++.+...|. +|+++ +|++++.+.+.+ .|... ..+..+.+.++|+||.|++
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga----~V~~~-d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~ 240 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA----TVTVL-DINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL 240 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCC
Confidence 345799999999999999999999998 99999 999998887776 55432 2234566778999999884
Q ss_pred -ccc-HHHH-HHHhccccCCCCEEEEec
Q 024016 81 -PQV-VKDV-AMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 81 -~~~-~~~v-~~~i~~~l~~~~~vis~~ 105 (274)
|.. ...+ ..+..+.++++.++|++.
T Consensus 241 ~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 241 VPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred cCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 321 1111 122334467888888775
No 235
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.36 E-value=4.8e-07 Score=78.71 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=65.6
Q ss_pred CCeEEEEcccHHHHHHHHH-HHhC--CCCCCCcEE-EEeCCCHHHHHHHHH-cCceeccCchhhccC--CCEEEEeeCcc
Q 024016 10 SFILGFIGAGKMAESIAKG-VAKS--GVLPPDRIC-TAVHSNLKRRDAFES-IGVKVLSDNNAVVEY--SDVVVFSVKPQ 82 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~-L~~~--g~~~~~~v~-v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~--aDiIil~v~~~ 82 (274)
++||||||+|.||..+... ++.. ++ ++. ++ +|++++.+...+ .++..++|..+++++ .|+|++|+|+.
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~----~l~av~-d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 76 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSW----HVAHIF-RRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHAD 76 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTE----EEEEEE-CSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGG
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCe----EEEEEE-cCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChH
Confidence 4699999999999964444 4332 34 666 66 999887754444 477888899998875 89999999988
Q ss_pred cHHHHHHHhccccCCCCEEEEecCCC--CHHHHH
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAAGV--KLKDLQ 114 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~g~--~~~~l~ 114 (274)
...++..... ..|+-|+. -+++ +.+...
T Consensus 77 ~h~~~~~~al---~aGk~Vl~-EKP~a~~~~e~~ 106 (345)
T 3f4l_A 77 SHFEYAKRAL---EAGKNVLV-EKPFTPTLAQAK 106 (345)
T ss_dssp GHHHHHHHHH---HTTCEEEE-CSSSCSSHHHHH
T ss_pred HHHHHHHHHH---HcCCcEEE-eCCCCCCHHHHH
Confidence 7766665443 35555553 3433 444433
No 236
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.36 E-value=6e-07 Score=78.75 Aligned_cols=88 Identities=14% Similarity=0.133 Sum_probs=63.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee---ccC---chhhccCCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV---LSD---NNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~---~~~---~~~~~~~aDiIil~v~~~ 82 (274)
++|||.|||+|.+|+.+++.|.+ .+ +|+++ +|+.++++.+.+..-.+ ..+ ..++++++|+||.|+|+.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~----~v~~~-~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EF----DVYIG-DVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TS----EEEEE-ESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CC----CeEEE-EcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 45899999999999999998865 45 89999 99999988876532111 122 345678999999999998
Q ss_pred cHHHHHHHhccccCCCCEEEEec
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~ 105 (274)
.-..+.+... ..|+-+++++
T Consensus 89 ~~~~v~~~~~---~~g~~yvD~s 108 (365)
T 3abi_A 89 LGFKSIKAAI---KSKVDMVDVS 108 (365)
T ss_dssp GHHHHHHHHH---HHTCEEEECC
T ss_pred ccchHHHHHH---hcCcceEeee
Confidence 7666655432 3456677664
No 237
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.36 E-value=5.4e-07 Score=76.05 Aligned_cols=92 Identities=15% Similarity=0.242 Sum_probs=65.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC----ceeccCchhhccCCCEEEEeeCcc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG----VKVLSDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g----~~~~~~~~~~~~~aDiIil~v~~~ 82 (274)
.+.+++.|+|+|.+|.+++..|.+.|. .+|+++ +|++++++.+.+ .+ +... +..++..++|+||-|||..
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~---~~v~v~-~R~~~~a~~la~~~~~~~~~~~~-~~~~l~~~aDiIInaTp~g 198 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQP---ASITVT-NRTFAKAEQLAELVAAYGEVKAQ-AFEQLKQSYDVIINSTSAS 198 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCC---SEEEEE-ESSHHHHHHHHHHHGGGSCEEEE-EGGGCCSCEEEEEECSCCC
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCC---CeEEEE-ECCHHHHHHHHHHhhccCCeeEe-eHHHhcCCCCEEEEcCcCC
Confidence 456799999999999999999999994 289999 999999888776 22 3332 3445457899999999866
Q ss_pred cHHHHHHHh-ccccCCCCEEEEec
Q 024016 83 VVKDVAMQI-RPLLSRKKLLVSVA 105 (274)
Q Consensus 83 ~~~~v~~~i-~~~l~~~~~vis~~ 105 (274)
...+.. .+ ...++++.+|+++.
T Consensus 199 m~~~~~-~l~~~~l~~~~~V~Dlv 221 (281)
T 3o8q_A 199 LDGELP-AIDPVIFSSRSVCYDMM 221 (281)
T ss_dssp C----C-SCCGGGEEEEEEEEESC
T ss_pred CCCCCC-CCCHHHhCcCCEEEEec
Confidence 432210 11 12356677777765
No 238
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.35 E-value=4.4e-07 Score=76.36 Aligned_cols=71 Identities=10% Similarity=0.180 Sum_probs=54.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c----CceeccCchhhcc-CCCEEEEeeCc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I----GVKVLSDNNAVVE-YSDVVVFSVKP 81 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~----g~~~~~~~~~~~~-~aDiIil~v~~ 81 (274)
.+.+++.|+|+|.||.+++..|.+.|. +|++| +|++++++.+.+ . .+.. .+..++.+ ++|+||.|+|.
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G~----~v~v~-~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivIn~t~~ 190 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQQ----NIVLA-NRTFSKTKELAERFQPYGNIQA-VSMDSIPLQTYDLVINATSA 190 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTTC----EEEEE-ESSHHHHHHHHHHHGGGSCEEE-EEGGGCCCSCCSEEEECCCC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHHccccCCeEE-eeHHHhccCCCCEEEECCCC
Confidence 356799999999999999999999997 99999 999999888875 2 2222 23334334 89999999986
Q ss_pred ccH
Q 024016 82 QVV 84 (274)
Q Consensus 82 ~~~ 84 (274)
...
T Consensus 191 ~~~ 193 (272)
T 1p77_A 191 GLS 193 (272)
T ss_dssp ---
T ss_pred CCC
Confidence 543
No 239
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.34 E-value=4.8e-07 Score=80.32 Aligned_cols=87 Identities=15% Similarity=0.222 Sum_probs=66.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceecc--------------------------
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLS-------------------------- 63 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~-------------------------- 63 (274)
..||+|||+|.+|...++.+...|. +|+++ ||++++.+.+.+.|.....
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga----~V~v~-D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 246 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGA----IVRAF-DTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEM 246 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHH
Confidence 5799999999999999999999998 89999 9999988888777765432
Q ss_pred -CchhhccCCCEEEEee--Cc----ccH-HHHHHHhccccCCCCEEEEec
Q 024016 64 -DNNAVVEYSDVVVFSV--KP----QVV-KDVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 64 -~~~~~~~~aDiIil~v--~~----~~~-~~v~~~i~~~l~~~~~vis~~ 105 (274)
+..+.+..+|+||.|+ |. ..+ ++.+. .++++.+||++.
T Consensus 247 ~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~----~mk~g~vIVdva 292 (401)
T 1x13_A 247 ELFAAQAKEVDIIVTTALIPGKPAPKLITREMVD----SMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHH----TSCTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHh----cCCCCcEEEEEc
Confidence 2345667899999994 41 112 33333 467888999875
No 240
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.34 E-value=9.5e-07 Score=73.86 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=65.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHH-HHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK-DVA 88 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~-~v~ 88 (274)
.+++.|||+|.||.+++..|.+.|. +|+++ +|++++++.+.+.++... +..++ .++|+||-|+|..... ..+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~----~v~V~-nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~~~~~l 190 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL----QVSVL-NRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLHNELPL 190 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCCCSCSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCCCCCCC
Confidence 5689999999999999999999997 99999 999999988886666543 33343 3899999999854211 001
Q ss_pred --HHhccccCCCCEEEEecC
Q 024016 89 --MQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 89 --~~i~~~l~~~~~vis~~~ 106 (274)
+.+...++++.+++++.-
T Consensus 191 ~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 191 NKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp CHHHHHHHHHHCSEEEESCC
T ss_pred ChHHHHhhCCCCCEEEEeCC
Confidence 111113456788888753
No 241
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.32 E-value=4.4e-06 Score=71.99 Aligned_cols=98 Identities=13% Similarity=0.159 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHHc-----C--ceeccCchhhccCCCEE
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FESI-----G--VKVLSDNNAVVEYSDVV 75 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~----l~~~-----g--~~~~~~~~~~~~~aDiI 75 (274)
.+..+||+|||+|.||.+++..|+..|+. .++.++ |+++++++. +... . +....+. +.+++||+|
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~--~el~L~-Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~aDiV 91 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLA--DELALV-DVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANSKLV 91 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCC--SEEEEE-CSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTEEEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCC--ceEEEE-eCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCCCEE
Confidence 45668999999999999999999998863 379999 999877654 2221 1 1223444 568999999
Q ss_pred EEee--C--cc------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 76 VFSV--K--PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 76 il~v--~--~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
|++. | |. .++++.+.+..+ .|+..++..++++.
T Consensus 92 vi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd 140 (331)
T 4aj2_A 92 IITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPVD 140 (331)
T ss_dssp EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred EEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChHH
Confidence 9986 2 21 133444555555 67788888877654
No 242
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.32 E-value=3.8e-06 Score=72.01 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=64.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC--HHHHHHH----HH------cCceec-cCchhhccCCCEE
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN--LKRRDAF----ES------IGVKVL-SDNNAVVEYSDVV 75 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~--~~~~~~l----~~------~g~~~~-~~~~~~~~~aDiI 75 (274)
+.+||+|||+|.||.+++..|...|+ . +|.++ |++ +++.+.. .. ....+. ++..+.+++||+|
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~-~--~v~l~-D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvV 82 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKEL-A--DVVLV-DIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVV 82 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-C--EEEEE-CCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-C--eEEEE-eccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEE
Confidence 45799999999999999999999886 3 89999 999 4443321 11 122222 2335678999999
Q ss_pred EEeeC----cc------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 76 VFSVK----PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 76 il~v~----~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
|++.. |. .++++.+.+..+ .|+..++..+++..
T Consensus 83 Iiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNPvd 131 (315)
T 3tl2_A 83 VITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNPVD 131 (315)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHH
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCChHH
Confidence 99972 21 123444455554 57778887777654
No 243
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.31 E-value=1.8e-06 Score=72.51 Aligned_cols=91 Identities=10% Similarity=0.182 Sum_probs=62.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC----ceeccCchhhc-cCCCEEEEeeCc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG----VKVLSDNNAVV-EYSDVVVFSVKP 81 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g----~~~~~~~~~~~-~~aDiIil~v~~ 81 (274)
++.+++.|+|+|.||.+++..|.+.|. +|+++ +|++++++.+.+ .+ +.. .+..++. .++|+||.|++.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~----~V~v~-~R~~~~~~~la~~~~~~~~~~~-~~~~~~~~~~~DivVn~t~~ 190 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDC----AVTIT-NRTVSRAEELAKLFAHTGSIQA-LSMDELEGHEFDLIINATSS 190 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSHHHHHHHHHHTGGGSSEEE-CCSGGGTTCCCSEEEECCSC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCC----EEEEE-ECCHHHHHHHHHHhhccCCeeE-ecHHHhccCCCCEEEECCCC
Confidence 356799999999999999999999998 99999 999999888775 22 222 2333333 489999999975
Q ss_pred ccHHHHHHHhc-cccCCCCEEEEec
Q 024016 82 QVVKDVAMQIR-PLLSRKKLLVSVA 105 (274)
Q Consensus 82 ~~~~~v~~~i~-~~l~~~~~vis~~ 105 (274)
....++ ..+. ..++++.+++++.
T Consensus 191 ~~~~~~-~~i~~~~l~~~~~v~D~~ 214 (271)
T 1nyt_A 191 GISGDI-PAIPSSLIHPGIYCYDMF 214 (271)
T ss_dssp GGGTCC-CCCCGGGCCTTCEEEESC
T ss_pred CCCCCC-CCCCHHHcCCCCEEEEec
Confidence 433211 0111 1245566666653
No 244
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.31 E-value=1.3e-06 Score=74.01 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=69.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHHcCceeccCchhhcc--CCCEEEEeeCcccH
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDiIil~v~~~~~ 84 (274)
+.+||+|+|+ |+||...++++.+.|+ ++. .. |+.... ++ ..|+.++.+..++.+ ++|++++++|++..
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~----~~V~~V-~p~~~g-~~--~~G~~vy~sl~el~~~~~~D~viI~tP~~~~ 77 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGT----KMVGGV-TPGKGG-TT--HLGLPVFNTVREAVAATGATASVIYVPAPFC 77 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC----EEEEEE-CTTCTT-CE--ETTEEEESSHHHHHHHHCCCEEEECCCGGGH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC----eEEEEe-CCCccc-ce--eCCeeccCCHHHHhhcCCCCEEEEecCHHHH
Confidence 4579999998 9999999999999887 633 44 543210 11 268888888888887 89999999999999
Q ss_pred HHHHHHhccccCCCCEEEEecCCCCHHH
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKD 112 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~g~~~~~ 112 (274)
.+++.+.... .. +.+|-.+.|++.+.
T Consensus 78 ~~~~~ea~~~-Gi-~~iVi~t~G~~~~~ 103 (288)
T 2nu8_A 78 KDSILEAIDA-GI-KLIITITEGIPTLD 103 (288)
T ss_dssp HHHHHHHHHT-TC-SEEEECCCCCCHHH
T ss_pred HHHHHHHHHC-CC-CEEEEECCCCCHHH
Confidence 9988776543 12 34455667887654
No 245
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=98.30 E-value=4.7e-06 Score=74.14 Aligned_cols=93 Identities=12% Similarity=0.196 Sum_probs=67.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cCc--h----hh-ccCCCEEEEeeC
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN--N----AV-VEYSDVVVFSVK 80 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~~--~----~~-~~~aDiIil~v~ 80 (274)
..++|.|+|+|++|..+++.|.+.|+ +|+++ ++++++++.+.+.|..+. .|. . ++ ++++|+||++++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~----~vvvI-d~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGV----KMVVL-DHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC----CEEEE-ECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC----CEEEE-ECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 34689999999999999999999999 99999 999999999888776432 221 1 12 578999999998
Q ss_pred cccHHHHHHHhccccCCCCEEEEecC
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
++.....+-.....+.|+..||.-..
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 76544333333333456544554433
No 246
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.30 E-value=1.7e-06 Score=75.82 Aligned_cols=85 Identities=13% Similarity=0.094 Sum_probs=61.9
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHHc-CceeccCchhhccC--CCEEEEeeCc
Q 024016 8 AESFILGFIGAGKMAES-IAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFESI-GVKVLSDNNAVVEY--SDVVVFSVKP 81 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~-~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~~-g~~~~~~~~~~~~~--aDiIil~v~~ 81 (274)
|+++||||||+|.||.. .+..|.+. ++ +|. ++ ++++++.. .+. ++..++|.++++++ .|+|++|+|+
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 75 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHF----ELYKIV-ERSKELSK--ERYPQASIVRSFKELTEDPEIDLIVVNTPD 75 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTE----EEEEEE-CSSCCGGG--TTCTTSEEESCSHHHHTCTTCCEEEECSCG
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCe----EEEEEE-cCCHHHHH--HhCCCCceECCHHHHhcCCCCCEEEEeCCh
Confidence 45679999999999997 67777664 44 665 55 99987632 224 67788899998876 8999999998
Q ss_pred ccHHHHHHHhccccCCCCEEE
Q 024016 82 QVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vi 102 (274)
....++..... ..|+-|+
T Consensus 76 ~~H~~~~~~al---~aGkhVl 93 (362)
T 3fhl_A 76 NTHYEYAGMAL---EAGKNVV 93 (362)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---HCCCeEE
Confidence 87766665443 3455454
No 247
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.29 E-value=2.7e-06 Score=72.81 Aligned_cols=92 Identities=16% Similarity=0.266 Sum_probs=65.4
Q ss_pred eEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH----H------cCcee--ccCchhhccCCCEEEEee
Q 024016 12 ILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE----S------IGVKV--LSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 12 ~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~----~------~g~~~--~~~~~~~~~~aDiIil~v 79 (274)
||+|||+|.||.+++..|...|+ .+|.++ |+++++++... . ...++ +.+. +.+++||+||++.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l---~el~L~-Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY---DDLLLI-ARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTA 75 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC---SCEEEE-CSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEECcCHHHHHHHHHHHhCCC---CEEEEE-cCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeC
Confidence 79999999999999999988876 269999 99987664321 1 13223 2444 6789999999996
Q ss_pred Cccc----------------HHHHHHHhccccCCCCEEEEecCCCC
Q 024016 80 KPQV----------------VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 80 ~~~~----------------~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+... ++++.+++..+ .|+..++..++++.
T Consensus 76 g~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~ 120 (308)
T 2d4a_B 76 GIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIVVITTNPVD 120 (308)
T ss_dssp SCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHH
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCchH
Confidence 4221 56666667665 37777776767544
No 248
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.27 E-value=2.7e-06 Score=71.43 Aligned_cols=92 Identities=15% Similarity=0.240 Sum_probs=65.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC---ceeccCchhhc-cCCCEEEEeeCcc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG---VKVLSDNNAVV-EYSDVVVFSVKPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g---~~~~~~~~~~~-~~aDiIil~v~~~ 82 (274)
.+.+++.|+|+|.+|.+++..|.+.|. .+|+++ +|++++++.+.+ .+ +... +..++. .++|+||-|||..
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~---~~v~i~-~R~~~~a~~la~~~~~~~~~~~-~~~~l~~~~~DivInaTp~g 192 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGP---SELVIA-NRDMAKALALRNELDHSRLRIS-RYEALEGQSFDIVVNATSAS 192 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCC---SEEEEE-CSCHHHHHHHHHHHCCTTEEEE-CSGGGTTCCCSEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCC---CEEEEE-eCCHHHHHHHHHHhccCCeeEe-eHHHhcccCCCEEEECCCCC
Confidence 456799999999999999999999994 289999 999999988876 22 3332 233332 6899999999865
Q ss_pred cHHHHHHHh-ccccCCCCEEEEec
Q 024016 83 VVKDVAMQI-RPLLSRKKLLVSVA 105 (274)
Q Consensus 83 ~~~~v~~~i-~~~l~~~~~vis~~ 105 (274)
...+. ..+ ...++++.+++++.
T Consensus 193 m~~~~-~~i~~~~l~~~~~V~Dlv 215 (272)
T 3pwz_A 193 LTADL-PPLPADVLGEAALAYELA 215 (272)
T ss_dssp GGTCC-CCCCGGGGTTCSEEEESS
T ss_pred CCCCC-CCCCHHHhCcCCEEEEee
Confidence 32110 001 12467788888775
No 249
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.26 E-value=4e-07 Score=73.65 Aligned_cols=80 Identities=15% Similarity=0.175 Sum_probs=53.8
Q ss_pred CCeEEEEcccHHHHHHHHH--HHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHHH
Q 024016 10 SFILGFIGAGKMAESIAKG--VAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~--L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
.++|+|||+|++|..+++. +...|+ ++..++|+++++...... .++...++..+++++.|++++|+|+....+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~----~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~~~~e 160 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNT----KISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAVAAQS 160 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------C----CEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCc----EEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCchhHHH
Confidence 4689999999999999994 334566 665444999887643221 223344566777766699999999988778
Q ss_pred HHHHhcc
Q 024016 87 VAMQIRP 93 (274)
Q Consensus 87 v~~~i~~ 93 (274)
+...+..
T Consensus 161 i~~~l~~ 167 (215)
T 2vt3_A 161 ITDRLVA 167 (215)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776653
No 250
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.26 E-value=5.6e-06 Score=71.68 Aligned_cols=99 Identities=12% Similarity=0.147 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHH-----cCceeccCchhhccCCCEEE
Q 024016 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FES-----IGVKVLSDNNAVVEYSDVVV 76 (274)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~----l~~-----~g~~~~~~~~~~~~~aDiIi 76 (274)
.|+++||+|||+ |.+|++++..++..|.. .+|.++ |+++++++. |.. ..+...++..+++++||+||
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~--~evvLi-Di~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVv 81 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLT--PNLCLY-DPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIV 81 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCC--SCEEEE-CSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCC--CEEEEE-eCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEE
Confidence 346789999998 99999999999998852 279999 999877653 333 12344456667889999999
Q ss_pred Eee--C--cc------------cHHHHHHHhccccCCCCE-EEEecCCCC
Q 024016 77 FSV--K--PQ------------VVKDVAMQIRPLLSRKKL-LVSVAAGVK 109 (274)
Q Consensus 77 l~v--~--~~------------~~~~v~~~i~~~l~~~~~-vis~~~g~~ 109 (274)
++. | |. .++++.+.+..+- |+.+ ++..++++.
T Consensus 82 itaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNPvd 130 (343)
T 3fi9_A 82 SSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNPAD 130 (343)
T ss_dssp ECCC-------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSSHH
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCchH
Confidence 986 2 21 1233334455443 6664 666666654
No 251
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=98.25 E-value=1.5e-06 Score=76.82 Aligned_cols=92 Identities=11% Similarity=0.158 Sum_probs=66.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec--cC----------------------
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL--SD---------------------- 64 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~--~~---------------------- 64 (274)
...||+|||+|.+|...++.+...|. +|+++ ||++++.+.+.+.|.... +.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga----~V~~~-d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~ 245 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA----VVMAT-DVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRK 245 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCSTTHHHHHHTTCEECCC-----------------------C
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHh
Confidence 45799999999999999999999998 89999 999988887777776543 11
Q ss_pred -----chhhccCCCEEEEee--CcccHHHHH-HHhccccCCCCEEEEec
Q 024016 65 -----NNAVVEYSDVVVFSV--KPQVVKDVA-MQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 65 -----~~~~~~~aDiIil~v--~~~~~~~v~-~~i~~~l~~~~~vis~~ 105 (274)
..+.+.++|+||.|+ |....+.++ .+....++++.+||++.
T Consensus 246 ~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 246 KQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp CHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred hhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 345677899999998 311111111 22233467888888775
No 252
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=98.25 E-value=1.4e-06 Score=76.74 Aligned_cols=102 Identities=14% Similarity=0.173 Sum_probs=70.6
Q ss_pred CCCCeEEEEc-ccHHHHH-HH----HHHHhCCCCC---CCcE----EEEeCCCHHHHHHHHH-cCc-eeccCchhhccC-
Q 024016 8 AESFILGFIG-AGKMAES-IA----KGVAKSGVLP---PDRI----CTAVHSNLKRRDAFES-IGV-KVLSDNNAVVEY- 71 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~-~a----~~L~~~g~~~---~~~v----~v~~~r~~~~~~~l~~-~g~-~~~~~~~~~~~~- 71 (274)
|+.+|||||| +|.||.. .+ ..+.+.+.+. ...+ .++ +|++++++.+.+ .|+ ..++|..+++++
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~-~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~ 82 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILV-GRSAEKVEALAKRFNIARWTTDLDAALADK 82 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEE-CSSSHHHHHHHHHTTCCCEESCHHHHHHCS
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEE-cCCHHHHHHHHHHhCCCcccCCHHHHhcCC
Confidence 4567999999 9999998 66 7777655310 0011 377 999999988876 787 477888888764
Q ss_pred -CCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCCC--CHHHHH
Q 024016 72 -SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV--KLKDLQ 114 (274)
Q Consensus 72 -aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~--~~~~l~ 114 (274)
.|+|++|+|+....++..... ..|+-|+ +-+++ +.+...
T Consensus 83 ~iD~V~i~tp~~~h~~~~~~al---~~Gk~V~-~EKP~a~~~~~~~ 124 (383)
T 3oqb_A 83 NDTMFFDAATTQARPGLLTQAI---NAGKHVY-CEKPIATNFEEAL 124 (383)
T ss_dssp SCCEEEECSCSSSSHHHHHHHH---TTTCEEE-ECSCSCSSHHHHH
T ss_pred CCCEEEECCCchHHHHHHHHHH---HCCCeEE-EcCCCCCCHHHHH
Confidence 899999999877666654433 4555555 44543 444433
No 253
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.24 E-value=3.7e-06 Score=73.41 Aligned_cols=70 Identities=19% Similarity=0.269 Sum_probs=56.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhcc-CCCEEEEeeCccc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVE-YSDVVVFSVKPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~-~aDiIil~v~~~~ 83 (274)
...++|+|+|+|+||..+++.|.+.|. +|+++ |+++++++.+.+ .|++.. +..++.. +||+++.|.....
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~Ga----kVvv~-D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~~~~ 242 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGA----KLVVT-DVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALGAV 242 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCSCC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccchHHH
Confidence 456899999999999999999999998 99999 999998887776 577655 3345444 8999999864443
No 254
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.23 E-value=2.5e-06 Score=75.77 Aligned_cols=70 Identities=23% Similarity=0.344 Sum_probs=56.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceec--cCchhhccCCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVL--SDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~--~~~~~~~~~aDiIil~v~~~ 82 (274)
..++|+|||+|.||..+++.|...|. .+|+++ +|++++++.+.+ .|+... .+..+.+.++|+||.|++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~---~~V~v~-~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~ 238 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGV---RAVLVA-NRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAP 238 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCC---SEEEEE-CSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCC---CEEEEE-eCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCC
Confidence 45799999999999999999998885 379999 999998866654 676542 34556678999999999743
No 255
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=98.23 E-value=2.1e-06 Score=74.37 Aligned_cols=86 Identities=14% Similarity=0.127 Sum_probs=59.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCc------------------eeccCchhhccC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGV------------------KVLSDNNAVVEY 71 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~------------------~~~~~~~~~~~~ 71 (274)
+||||+|+|.||..+++.|.+... .++...++++++++..+.+ .|+ .+..+..++..+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~---~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~ 79 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDD---MELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK 79 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTT---EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCC---CEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccC
Confidence 699999999999999999987542 2565444888777665554 432 334566777779
Q ss_pred CCEEEEeeCcccHHHHHHHhccccCCCCEEE
Q 024016 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 72 aDiIil~v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+|+|++|+|.....+..... +..|+.|+
T Consensus 80 vDvV~~aTp~~~h~~~a~~~---l~aGk~Vi 107 (334)
T 2czc_A 80 VDIIVDATPGGIGAKNKPLY---EKAGVKAI 107 (334)
T ss_dssp CSEEEECCSTTHHHHHHHHH---HHHTCEEE
T ss_pred CCEEEECCCccccHHHHHHH---HHcCCceE
Confidence 99999999987654444433 23345555
No 256
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.22 E-value=3e-06 Score=72.58 Aligned_cols=91 Identities=13% Similarity=0.174 Sum_probs=61.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHh-C-CCCCCCcEEEEeCCCHHH-HHHHHH-cCcee-ccCchhhc-----cCCCEEEEe
Q 024016 9 ESFILGFIGAGKMAESIAKGVAK-S-GVLPPDRICTAVHSNLKR-RDAFES-IGVKV-LSDNNAVV-----EYSDVVVFS 78 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~-~-g~~~~~~v~v~~~r~~~~-~~~l~~-~g~~~-~~~~~~~~-----~~aDiIil~ 78 (274)
+++||||||+|.+|..+++.|.+ . +. ++...+++++++ .+.+.+ .|+.. .++.++++ .+.|+||+|
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~----elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~a 78 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYL----EMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDA 78 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSE----EEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEEC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCe----EEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEEC
Confidence 45799999999999999999865 2 33 454333999877 555544 67653 34445553 357999999
Q ss_pred eCcccHHHHHHHhccccCCCCEEEEe
Q 024016 79 VKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 79 v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
+|++...+........ ++|+.|++.
T Consensus 79 tp~~~h~~~a~~al~a-~~Gk~Vi~e 103 (312)
T 1nvm_B 79 TSASAHVQNEALLRQA-KPGIRLIDL 103 (312)
T ss_dssp SCHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred CChHHHHHHHHHHHHh-CCCCEEEEc
Confidence 9977766666554322 237777764
No 257
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=98.19 E-value=3.3e-06 Score=74.16 Aligned_cols=93 Identities=18% Similarity=0.250 Sum_probs=65.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCcee------ccCchhhccCCCEEEEeeC
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKV------LSDNNAVVEYSDVVVFSVK 80 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~------~~~~~~~~~~aDiIil~v~ 80 (274)
...++|+|+|+|.+|..+++.+...|. +|+++ +|++++.+.+.+ .|..+ ..+..+.+.++|+||.|++
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga----~V~~~-d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g 238 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA----QVTIL-DVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVL 238 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-ECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCC
Confidence 345799999999999999999999998 99999 999998877765 55432 1233456778999999986
Q ss_pred ccc--HHHH-HHHhccccCCCCEEEEec
Q 024016 81 PQV--VKDV-AMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 81 ~~~--~~~v-~~~i~~~l~~~~~vis~~ 105 (274)
... ...+ ..+..+.++++..+|++.
T Consensus 239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 332 1111 123334466788888764
No 258
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.19 E-value=1.1e-05 Score=68.22 Aligned_cols=96 Identities=19% Similarity=0.281 Sum_probs=65.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHH----HHHH----cC--cee-ccCchhhccCCCEEEEee
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRD----AFES----IG--VKV-LSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~----~l~~----~g--~~~-~~~~~~~~~~aDiIil~v 79 (274)
|||+|||+|++|++++..|..++.+. ++.++ |.++++++ +|.. .+ ..+ ..+..+.+++||+|+++-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~--el~L~-Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVD--EIALV-DIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCS--EEEEE-CSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCC--EEEEE-eCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEec
Confidence 79999999999999999999888743 89999 99986543 2222 11 122 233346789999999986
Q ss_pred --C--ccc------------HHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 80 --K--PQV------------VKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 80 --~--~~~------------~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
| |.. ++++.+++..+ .|+.+++-+++++..
T Consensus 78 G~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvsNPvd~ 123 (294)
T 2x0j_A 78 GLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNPMDV 123 (294)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEecCcchh
Confidence 2 322 23444455554 467788878787653
No 259
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.18 E-value=4.7e-06 Score=72.51 Aligned_cols=83 Identities=19% Similarity=0.209 Sum_probs=58.8
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcEE-EEeCCCHHHHHHHHH----cCceeccCchhhccC--CCEEEEeeC
Q 024016 10 SFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRIC-TAVHSNLKRRDAFES----IGVKVLSDNNAVVEY--SDVVVFSVK 80 (274)
Q Consensus 10 ~~~IgiIG~G~mG~-~~a~~L~~~-g~~~~~~v~-v~~~r~~~~~~~l~~----~g~~~~~~~~~~~~~--aDiIil~v~ 80 (274)
++||||||+|.||. ..+..+.+. ++ +|. ++ +|+ +.+.+.+ .++..+++.++++++ .|+|++|+|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~----~l~av~-d~~--~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 74 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETL----EVKTIF-DLH--VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTP 74 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTE----EEEEEE-CTT--CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSC
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCe----EEEEEE-CCC--HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCC
Confidence 36999999999999 456556553 34 665 56 888 3444433 477888899998875 899999999
Q ss_pred cccHHHHHHHhccccCCCCEEE
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+....++..... ..|+-|+
T Consensus 75 ~~~h~~~~~~al---~aGk~Vl 93 (349)
T 3i23_A 75 AHTHYDLAKQAI---LAGKSVI 93 (349)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HcCCEEE
Confidence 887766665443 3455555
No 260
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.18 E-value=2.8e-06 Score=73.44 Aligned_cols=93 Identities=17% Similarity=0.264 Sum_probs=65.3
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccC---CCEEEEeeCcc
Q 024016 8 AESFILGFIGAGKMAE-SIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEY---SDVVVFSVKPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~-~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~---aDiIil~v~~~ 82 (274)
|+++||||||+|.||. ..+..|.+. +. +|...++|++++ .|+..++|..+++++ .|+|++|+|+.
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~----~lvav~d~~~~~------~g~~~~~~~~~ll~~~~~vD~V~i~tp~~ 92 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANF----KLVATASRHGTV------EGVNSYTTIEAMLDAEPSIDAVSLCMPPQ 92 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTE----EEEEEECSSCCC------TTSEEESSHHHHHHHCTTCCEEEECSCHH
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCe----EEEEEEeCChhh------cCCCccCCHHHHHhCCCCCCEEEEeCCcH
Confidence 4567999999999998 788888875 33 655433998653 578888888888754 89999999988
Q ss_pred cHHHHHHHhccccCCCCEEEEecCC--CCHHHHH
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAAG--VKLKDLQ 114 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~g--~~~~~l~ 114 (274)
...++..... ..|+-|+ +-++ .+.+..+
T Consensus 93 ~H~~~~~~al---~aGkhVl-~EKP~a~~~~e~~ 122 (330)
T 4ew6_A 93 YRYEAAYKAL---VAGKHVF-LEKPPGATLSEVA 122 (330)
T ss_dssp HHHHHHHHHH---HTTCEEE-ECSSSCSSHHHHH
T ss_pred HHHHHHHHHH---HcCCcEE-EeCCCCCCHHHHH
Confidence 7766665543 3455555 3343 3444443
No 261
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=98.15 E-value=6e-06 Score=69.25 Aligned_cols=68 Identities=16% Similarity=0.241 Sum_probs=54.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCccc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQV 83 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~ 83 (274)
.+++.|||+|.+|.+++..|.+.|. .+|+++ ||++++++.+.+ .+.....+.. ..++|+||-|||...
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~---~~i~v~-nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm 187 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGF---EKLKIY-ARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGM 187 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTC---CCEEEE-CSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC---CEEEEE-eCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCc
Confidence 4689999999999999999999986 379999 999999988876 4544332222 467999999998654
No 262
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.12 E-value=2e-06 Score=72.29 Aligned_cols=99 Identities=20% Similarity=0.207 Sum_probs=65.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHh-CCCCCCCcEE-EEeCCCHHHH--HHHH------HcCceeccCchhhccCCCEEE
Q 024016 8 AESFILGFIGA-GKMAESIAKGVAK-SGVLPPDRIC-TAVHSNLKRR--DAFE------SIGVKVLSDNNAVVEYSDVVV 76 (274)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~~a~~L~~-~g~~~~~~v~-v~~~r~~~~~--~~l~------~~g~~~~~~~~~~~~~aDiIi 76 (274)
|++|||+|+|+ |+||+.+++.+.+ .++ ++. ++ ++++++. +.+. ..++.+.++..+++.++|+||
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~----elva~~-d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVI 77 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGV----QLGAAL-EREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFI 77 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTE----ECCCEE-CCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEE
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCC----EEEEEE-ecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEE
Confidence 34579999998 9999999998874 455 665 66 8876431 1111 134555677777788899999
Q ss_pred EeeCcccHHHHHHHhccccCCCCEEEEecCCCCHHHHH
Q 024016 77 FSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDLQ 114 (274)
Q Consensus 77 l~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l~ 114 (274)
-+++|+...+.+..... .|.-+|.-+.|.+.+..+
T Consensus 78 Dft~p~~~~~~~~~a~~---~G~~vVigTtG~~~e~~~ 112 (273)
T 1dih_A 78 DFTRPEGTLNHLAFCRQ---HGKGMVIGTTGFDEAGKQ 112 (273)
T ss_dssp ECSCHHHHHHHHHHHHH---TTCEEEECCCCCCHHHHH
T ss_pred EcCChHHHHHHHHHHHh---CCCCEEEECCCCCHHHHH
Confidence 77777776666655432 344455544577766443
No 263
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=98.11 E-value=7.4e-06 Score=70.20 Aligned_cols=97 Identities=9% Similarity=0.044 Sum_probs=67.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--cCceeccCchhhc----------cCCCEEE
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--IGVKVLSDNNAVV----------EYSDVVV 76 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~--~g~~~~~~~~~~~----------~~aDiIi 76 (274)
++||||||+ |.||...+..+.+.+. ++...+++++++.. +.+ .+...+++.++++ .+.|+|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~----~lvav~d~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~ 77 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGG----VLVASLDPATNVGL-VDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLS 77 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTC----EEEEEECSSCCCGG-GGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEE
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCC----EEEEEEcCCHHHHH-HHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEE
Confidence 579999999 7899999999998775 65544399987742 333 3567778887776 5789999
Q ss_pred EeeCcccHHHHHHHhccccCCCCEEEEecCCC--CHHHHHH
Q 024016 77 FSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV--KLKDLQE 115 (274)
Q Consensus 77 l~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~--~~~~l~~ 115 (274)
+|+|+....++..... ..|+-|+ +-+++ +.+..++
T Consensus 78 I~tP~~~H~~~~~~al---~aGkhVl-~EKPla~~~~ea~~ 114 (312)
T 3o9z_A 78 IASPNHLHYPQIRMAL---RLGANAL-SEKPLVLWPEEIAR 114 (312)
T ss_dssp ECSCGGGHHHHHHHHH---HTTCEEE-ECSSSCSCHHHHHH
T ss_pred ECCCchhhHHHHHHHH---HCCCeEE-EECCCCCCHHHHHH
Confidence 9999988777665543 3455555 33443 3444433
No 264
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=98.10 E-value=7.9e-06 Score=70.22 Aligned_cols=85 Identities=13% Similarity=0.050 Sum_probs=62.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--cCceeccCchhhc-----------cCCCEE
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--IGVKVLSDNNAVV-----------EYSDVV 75 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~--~g~~~~~~~~~~~-----------~~aDiI 75 (274)
++||||||+ |.||...+..|.+.+. ++...+++++++. .+.+ .+...+++.++++ .+.|+|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~----~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V 77 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGN----CLVSAYDINDSVG-IIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYV 77 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTC----EEEEEECSSCCCG-GGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEE
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCC----EEEEEEcCCHHHH-HHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEE
Confidence 579999999 7899999999998776 6554449988764 2333 3667778887765 468999
Q ss_pred EEeeCcccHHHHHHHhccccCCCCEEE
Q 024016 76 VFSVKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 76 il~v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
++|+|+....++..... ..|+-|+
T Consensus 78 ~I~tP~~~H~~~~~~al---~aGkhVl 101 (318)
T 3oa2_A 78 SICSPNYLHYPHIAAGL---RLGCDVI 101 (318)
T ss_dssp EECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred EECCCcHHHHHHHHHHH---HCCCeEE
Confidence 99999988777665543 2444444
No 265
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=98.10 E-value=5.2e-06 Score=70.52 Aligned_cols=86 Identities=10% Similarity=0.061 Sum_probs=58.9
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHh----CCCCCCCcEE-EEeCCCHHHHHHHHHcCceeccCchhhcc--CCCEEE
Q 024016 4 FPIPAESFILGFIGAGKMAESIAKGVAK----SGVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVV 76 (274)
Q Consensus 4 ~~~~~~~~~IgiIG~G~mG~~~a~~L~~----~g~~~~~~v~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDiIi 76 (274)
|+-+++++||||||+|.||...+..+.+ .+. ++. ++ +|++.. .+.|+. ..+..++++ +.|+|+
T Consensus 1 M~~~~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~----~lvav~-d~~~~a----~~~g~~-~~~~~ell~~~~vD~V~ 70 (294)
T 1lc0_A 1 MITNSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFL----NLIGFV-SRRELG----SLDEVR-QISLEDALRSQEIDVAY 70 (294)
T ss_dssp CCCCCCSEEEEEECCSHHHHHHHHHHTSHHHHTTE----EEEEEE-CSSCCC----EETTEE-BCCHHHHHHCSSEEEEE
T ss_pred CCCCCCcceEEEEEEcHHHHHHHHHHhccccCCCE----EEEEEE-CchHHH----HHcCCC-CCCHHHHhcCCCCCEEE
Confidence 3445567899999999999999998865 233 554 55 876421 124655 467888776 689999
Q ss_pred EeeCcccHHHHHHHhccccCCCCEEE
Q 024016 77 FSVKPQVVKDVAMQIRPLLSRKKLLV 102 (274)
Q Consensus 77 l~v~~~~~~~v~~~i~~~l~~~~~vi 102 (274)
+|+|+....+...... ..|+-|+
T Consensus 71 i~tp~~~H~~~~~~al---~aGkhVl 93 (294)
T 1lc0_A 71 ICSESSSHEDYIRQFL---QAGKHVL 93 (294)
T ss_dssp ECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred EeCCcHhHHHHHHHHH---HCCCcEE
Confidence 9999887666655433 3455444
No 266
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=98.10 E-value=5.7e-06 Score=73.81 Aligned_cols=90 Identities=22% Similarity=0.297 Sum_probs=61.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c-C----------------------ceeccC
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I-G----------------------VKVLSD 64 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~-g----------------------~~~~~~ 64 (274)
+..||||||+|.||+.++..+.+.. ..+|...++|++++++.+.+ . | ..+++|
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~---~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D 98 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQ---GIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDD 98 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSS---SEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESC
T ss_pred CceEEEEECChHHHHHHHHHHhhCC---CcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECC
Confidence 4579999999999999998886532 12555444999998877654 2 4 346678
Q ss_pred chhhcc--CCCEEEEeeCcc-cHHHHHHHhccccCCCCEEEEe
Q 024016 65 NNAVVE--YSDVVVFSVKPQ-VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 65 ~~~~~~--~aDiIil~v~~~-~~~~v~~~i~~~l~~~~~vis~ 104 (274)
..++++ +.|+|++|+|+. ...++... .+..|+-|+..
T Consensus 99 ~eeLL~d~dIDaVviaTp~p~~H~e~a~~---AL~AGKHVv~~ 138 (446)
T 3upl_A 99 NDLILSNPLIDVIIDATGIPEVGAETGIA---AIRNGKHLVMM 138 (446)
T ss_dssp HHHHHTCTTCCEEEECSCCHHHHHHHHHH---HHHTTCEEEEC
T ss_pred HHHHhcCCCCCEEEEcCCChHHHHHHHHH---HHHcCCcEEec
Confidence 888876 589999999753 32333322 23466667743
No 267
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=98.09 E-value=1e-05 Score=70.57 Aligned_cols=106 Identities=16% Similarity=0.294 Sum_probs=65.8
Q ss_pred CCCCCCCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cC-----ceeccCchhhccC
Q 024016 3 AFPIPAESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IG-----VKVLSDNNAVVEY 71 (274)
Q Consensus 3 ~~~~~~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-----~g-----~~~~~~~~~~~~~ 71 (274)
++..+|+++||+|+| .|.+|..+.+.|.+... .++...+++. +.-.++.. .+ +.+ .+ .+...+
T Consensus 9 ~~~~~M~~~kV~IiGAtG~iG~~llr~L~~~p~---~elvai~~~~-~~g~~~~~~~~~~~~~v~~dl~~-~~-~~~~~~ 82 (359)
T 1xyg_A 9 SSVKPEKDIRIGLLGASGYTGAEIVRLLANHPH---FQVTLMTADR-KAGQSMESVFPHLRAQKLPTLVS-VK-DADFST 82 (359)
T ss_dssp ------CCEEEEEECCSSHHHHHHHHHHHTCSS---EEEEEEBCST-TTTSCHHHHCGGGTTSCCCCCBC-GG-GCCGGG
T ss_pred cccccccCcEEEEECcCCHHHHHHHHHHHcCCC---cEEEEEeCch-hcCCCHHHhCchhcCccccccee-cc-hhHhcC
Confidence 455666678999999 89999999999987653 2666662433 22112221 12 112 12 344568
Q ss_pred CCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCCCC---HHHHHHhhC
Q 024016 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK---LKDLQEWTG 118 (274)
Q Consensus 72 aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~---~~~l~~~~~ 118 (274)
+|+||+|+|.....+..... ..|..+|+.++... .+..++|++
T Consensus 83 vDvVf~atp~~~s~~~a~~~----~aG~~VId~sa~~R~~~~~~y~~~y~ 128 (359)
T 1xyg_A 83 VDAVFCCLPHGTTQEIIKEL----PTALKIVDLSADFRLRNIAEYEEWYG 128 (359)
T ss_dssp CSEEEECCCTTTHHHHHHTS----CTTCEEEECSSTTTCSCHHHHHHHHS
T ss_pred CCEEEEcCCchhHHHHHHHH----hCCCEEEECCccccCCchhhhhhhhc
Confidence 99999999988877766544 46788999877653 355666665
No 268
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.09 E-value=3.9e-06 Score=70.72 Aligned_cols=97 Identities=14% Similarity=0.254 Sum_probs=67.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHH-----HHHHH---HcCceeccCchhhccCCCEEEEee
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKR-----RDAFE---SIGVKVLSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~-----~~~l~---~~g~~~~~~~~~~~~~aDiIil~v 79 (274)
++||+|+| +|+||+.+++.+.+. ++ ++...++|++.. +..+. ..|+.++++..+++.++|+||-++
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~----eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT 96 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDV----ELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFS 96 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSE----EEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECS
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCC----EEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcC
Confidence 46999999 999999999998754 33 554333886421 11222 246777888888888999999999
Q ss_pred CcccHHHHHHHhccccCCCCEEEEecCCCCHHHH
Q 024016 80 KPQVVKDVAMQIRPLLSRKKLLVSVAAGVKLKDL 113 (274)
Q Consensus 80 ~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~~~l 113 (274)
+|+...+.+..... .|.-+|..+.|.+.+.+
T Consensus 97 ~p~a~~~~~~~~l~---~Gv~vViGTTG~~~e~~ 127 (288)
T 3ijp_A 97 QPQASVLYANYAAQ---KSLIHIIGTTGFSKTEE 127 (288)
T ss_dssp CHHHHHHHHHHHHH---HTCEEEECCCCCCHHHH
T ss_pred CHHHHHHHHHHHHH---cCCCEEEECCCCCHHHH
Confidence 88877666655433 34556665667776543
No 269
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.03 E-value=1e-05 Score=68.45 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=69.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEE-EEeCCCHHHHHHHHHcCceeccCchhhcc--CCCEEEEeeCcccH
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDiIil~v~~~~~ 84 (274)
+.+||+|+|+ |+||..+++++.+.|+ ++. .. ++.....+ ..|+.++.+..++.+ ++|++++++|++..
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~----~~v~~V-nP~~~g~~---i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~ 77 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGT----KIVAGV-TPGKGGME---VLGVPVYDTVKEAVAHHEVDASIIFVPAPAA 77 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC----EEEEEE-CTTCTTCE---ETTEEEESSHHHHHHHSCCSEEEECCCHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCC----eEEEEE-CCCCCCce---ECCEEeeCCHHHHhhcCCCCEEEEecCHHHH
Confidence 3579999998 9999999999999898 643 44 55431010 258888888888887 89999999999999
Q ss_pred HHHHHHhccccCCCCEEEEecCCCCHH
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAAGVKLK 111 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~g~~~~ 111 (274)
.+++.+....- . +.+|-.+.|++.+
T Consensus 78 ~~~~~ea~~~G-i-~~vVi~t~G~~~~ 102 (288)
T 1oi7_A 78 ADAALEAAHAG-I-PLIVLITEGIPTL 102 (288)
T ss_dssp HHHHHHHHHTT-C-SEEEECCSCCCHH
T ss_pred HHHHHHHHHCC-C-CEEEEECCCCCHH
Confidence 99988765431 2 3345466788764
No 270
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=98.02 E-value=2.3e-05 Score=70.02 Aligned_cols=91 Identities=21% Similarity=0.346 Sum_probs=63.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC--------CCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhcc--CCCEEEE
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKS--------GVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVF 77 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~--------g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDiIil 77 (274)
|+..||||||+|.||+.+++.|.++ |. ..+|...++|++++.+.+. .+..++++..++++ +.|+|+.
T Consensus 8 Mk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~--~i~lvaV~d~~~~~~~~~~-~~~~~~~d~~ell~d~diDvVve 84 (444)
T 3mtj_A 8 MKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGR--EIRVVRAAVRNLDKAEALA-GGLPLTTNPFDVVDDPEIDIVVE 84 (444)
T ss_dssp CSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSS--CEEEEEEECSCHHHHHHHH-TTCCEESCTHHHHTCTTCCEEEE
T ss_pred hCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCC--CEEEEEEEECCHHHhhhhc-ccCcccCCHHHHhcCCCCCEEEE
Confidence 4567999999999999999877642 21 1145433399998877663 35566778888876 5799999
Q ss_pred eeCc-ccHHHHHHHhccccCCCCEEEEe
Q 024016 78 SVKP-QVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 78 ~v~~-~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
|+|+ +...+.+... +..|+-|++-
T Consensus 85 ~tp~~~~h~~~~~~A---L~aGKhVvte 109 (444)
T 3mtj_A 85 LIGGLEPARELVMQA---IANGKHVVTA 109 (444)
T ss_dssp CCCSSTTHHHHHHHH---HHTTCEEEEC
T ss_pred cCCCchHHHHHHHHH---HHcCCEEEEC
Confidence 9985 5555554332 3466677754
No 271
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.01 E-value=8.2e-05 Score=63.39 Aligned_cols=95 Identities=15% Similarity=0.223 Sum_probs=63.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHH----HHH-----cCceeccCchhhccCCCEEEEe
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDA----FES-----IGVKVLSDNNAVVEYSDVVVFS 78 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r--~~~~~~~----l~~-----~g~~~~~~~~~~~~~aDiIil~ 78 (274)
|||+|+| +|.+|.+++..|+..|+. .++.++ |+ ++++++. +.. ..+++..+..++++++|+||++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~--~el~L~-Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ 77 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIA--DEVVFV-DIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVIT 77 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCC--SEEEEE-CCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC--CEEEEE-cCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEc
Confidence 5999999 999999999999988762 368889 99 7765432 222 1223333346778999999998
Q ss_pred eC-cc---------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 79 VK-PQ---------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 79 v~-~~---------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
.. +. .++++++.+..+ .++..++..++++.
T Consensus 78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv~ 123 (303)
T 1o6z_A 78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVD 123 (303)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChHH
Confidence 73 11 233444555544 56667776666654
No 272
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=98.01 E-value=9.9e-06 Score=73.15 Aligned_cols=73 Identities=12% Similarity=0.210 Sum_probs=57.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCcee-ccC---c---hh-hccCCCEEEEee
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKV-LSD---N---NA-VVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~-~~~---~---~~-~~~~aDiIil~v 79 (274)
+.|||-|+|+|.+|..+|+.|.+.|| +|++. ++++++++.+.+ .++.+ ..+ + .+ -+++||+++.++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~----~v~vI-d~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENN----DITIV-DKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTE----EEEEE-ESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCC----CEEEE-ECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 46899999999999999999999999 99999 999999998876 56543 222 1 11 157899998888
Q ss_pred CcccHHH
Q 024016 80 KPQVVKD 86 (274)
Q Consensus 80 ~~~~~~~ 86 (274)
+++...-
T Consensus 77 ~~De~Nl 83 (461)
T 4g65_A 77 NTDETNM 83 (461)
T ss_dssp SCHHHHH
T ss_pred CChHHHH
Confidence 8765443
No 273
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.00 E-value=2.8e-05 Score=69.92 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=69.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVKD 86 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~~~ 86 (274)
...++++|+|+|.+|.++++.|...|. +|+++ ++++.+.......|..+ .+..++...+|+++.++.. +.+..
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA----~Viv~-D~~~~~a~~Aa~~g~dv-~~lee~~~~aDvVi~atG~~~vl~~ 336 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA----RVIVT-EIDPICALQATMEGLQV-LTLEDVVSEADIFVTTTGNKDIIML 336 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEE-CCGGGTTTTCSEEEECSSCSCSBCH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHhCCcc-CCHHHHHHhcCEEEeCCCChhhhhH
Confidence 356799999999999999999999998 99999 99998887777777765 4667888899999998753 33322
Q ss_pred HHHHhccccCCCCEEEEecC
Q 024016 87 VAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~ 106 (274)
+....++++.+|++...
T Consensus 337 ---e~l~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 337 ---DHMKKMKNNAIVCNIGH 353 (488)
T ss_dssp ---HHHTTSCTTEEEEESSS
T ss_pred ---HHHHhcCCCeEEEEcCC
Confidence 12234578888877643
No 274
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.00 E-value=6.4e-06 Score=67.88 Aligned_cols=82 Identities=17% Similarity=0.199 Sum_probs=62.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcE-EEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v-~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
-.|||+++|+|+||+.+++. . ++ ++ .+| + ++..++ |+.+++|.++++.++|+|+-|-.++++.+.
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~l----eLv~v~-~---~k~gel---gv~a~~d~d~lla~pD~VVe~A~~~av~e~ 76 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NF----EKIYAY-D---RISKDI---PGVVRLDEFQVPSDVSTVVECASPEAVKEY 76 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CC----SEEEEE-C---SSCCCC---SSSEECSSCCCCTTCCEEEECSCHHHHHHH
T ss_pred ccceEEEECcCHHHHHHHhc--C-Cc----EEEEEE-e---cccccc---CceeeCCHHHHhhCCCEEEECCCHHHHHHH
Confidence 35899999999999999988 4 66 65 666 6 333322 777778888888899999999988877775
Q ss_pred HHHhccccCCCCEEEEecCC
Q 024016 88 AMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~~~g 107 (274)
...+ |..|.-+|.++.|
T Consensus 77 ~~~i---L~aG~dvv~~S~g 93 (253)
T 1j5p_A 77 SLQI---LKNPVNYIIISTS 93 (253)
T ss_dssp HHHH---TTSSSEEEECCGG
T ss_pred HHHH---HHCCCCEEEcChh
Confidence 5554 4677778876654
No 275
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.98 E-value=9.9e-06 Score=73.19 Aligned_cols=89 Identities=19% Similarity=0.247 Sum_probs=63.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cCcee--c--c---CchhhccCCCEEEEe
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IGVKV--L--S---DNNAVVEYSDVVVFS 78 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~--~--~---~~~~~~~~aDiIil~ 78 (274)
.++++|.|+|+|.+|++++..|.+. |+ +|+++ +|++++++.+.+ .++.. . . +..++++++|+||.|
T Consensus 21 l~~k~VlIiGAGgiG~aia~~L~~~~g~----~V~v~-~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 21 HMGKNVLLLGSGFVAQPVIDTLAANDDI----NVTVA-CRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp --CEEEEEECCSTTHHHHHHHHHTSTTE----EEEEE-ESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred CCCCEEEEECChHHHHHHHHHHHhCCCC----eEEEE-ECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 3456899999999999999999998 66 89999 999999888875 34432 1 1 223456789999999
Q ss_pred eCcccHHHHHHHhccccCCCCEEEEe
Q 024016 79 VKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 79 v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
+|+.....+.... +.++..+++.
T Consensus 96 tp~~~~~~v~~a~---l~~g~~vvd~ 118 (467)
T 2axq_A 96 IPYTFHPNVVKSA---IRTKTDVVTS 118 (467)
T ss_dssp SCGGGHHHHHHHH---HHHTCEEEEC
T ss_pred CchhhhHHHHHHH---HhcCCEEEEe
Confidence 9976544443322 2345566654
No 276
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.97 E-value=1.6e-05 Score=69.17 Aligned_cols=145 Identities=12% Similarity=0.068 Sum_probs=85.8
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCC-----CCCCCcEEEEeCC-CHHH-HHH----HHH-cCceeccCchhhccCCCEE
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSG-----VLPPDRICTAVHS-NLKR-RDA----FES-IGVKVLSDNNAVVEYSDVV 75 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g-----~~~~~~v~v~~~r-~~~~-~~~----l~~-~g~~~~~~~~~~~~~aDiI 75 (274)
+++||+|+| .|.+|..+.+.|.+++ + .+++...+| +..+ ... +.. ..+.+.+...+.+.++|+|
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~---~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvV 84 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGR---LRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAV 84 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTS---EEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCcc---EEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEE
Confidence 457999999 8999999999998876 3 266665232 3222 221 111 1122211112345689999
Q ss_pred EEeeCcccHHHHHHHhccccCCCCEEEEecCCCCH---HHHHHhhC-CCc--eEEEcCCc---HHhhcCCceEEecCCCC
Q 024016 76 VFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTG-HSR--FIRVMPNT---PSAVGEAATVMSLGGTA 146 (274)
Q Consensus 76 il~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~~---~~l~~~~~-~~~--~~~~~p~~---~~~~~~g~~~i~~~~~~ 146 (274)
|+|++.....++...+ ..|..+|++++.... +..++|++ .+. +.-..|.. +....+ ...+ ..+++
T Consensus 85 f~alg~~~s~~~~~~~----~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~~~i~~-~~iI-anPgC 158 (352)
T 2nqt_A 85 FLALPHGHSAVLAQQL----SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGARDQLRG-TRRI-AVPGC 158 (352)
T ss_dssp EECCTTSCCHHHHHHS----CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHHHHHTT-CSEE-ECCCH
T ss_pred EECCCCcchHHHHHHH----hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCHHHHhc-CCEE-EcCCH
Confidence 9999988877777665 357889998877642 45677776 222 23344443 333332 2333 34444
Q ss_pred CH-HHHHHHHHHhhhcC
Q 024016 147 TE-EDGELIGKLFGSVG 162 (274)
Q Consensus 147 ~~-~~~~~v~~ll~~~g 162 (274)
.. ...-.+.++.+..+
T Consensus 159 ~tt~~~lal~PL~~~~~ 175 (352)
T 2nqt_A 159 YPTAALLALFPALAADL 175 (352)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 43 33456778877665
No 277
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.97 E-value=2.1e-05 Score=68.18 Aligned_cols=91 Identities=11% Similarity=0.128 Sum_probs=59.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceecc-----------------CchhhccCC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLS-----------------DNNAVVEYS 72 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~-----------------~~~~~~~~a 72 (274)
.||||+|+|+||..+++.|.+... -++...+++++++...+.. .|+.... +..++.+++
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~---~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~v 78 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPD---MKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTS 78 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTT---EEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCC---CEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCC
Confidence 589999999999999999886543 2555444887665544443 4444322 222334579
Q ss_pred CEEEEeeCcccHHHHHHHhccccCCCCEEEEecCC
Q 024016 73 DVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 73 DiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g 107 (274)
|+||.|+|.....+...... ..|..+|+.++.
T Consensus 79 DvV~~aTp~~~s~~~a~~~~---~aG~kvV~~sa~ 110 (340)
T 1b7g_O 79 DIVVDTTPNGVGAQYKPIYL---QLQRNAIFQGGE 110 (340)
T ss_dssp SEEEECCSTTHHHHHHHHHH---HTTCEEEECTTS
T ss_pred CEEEECCCCchhHHHHHHHH---HcCCeEEEeCCC
Confidence 99999999887766665433 345556665443
No 278
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.93 E-value=2.7e-05 Score=63.65 Aligned_cols=88 Identities=9% Similarity=0.045 Sum_probs=60.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-c---Cch---hh-ccCCCEEEEeeCc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-S---DNN---AV-VEYSDVVVFSVKP 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~---~~~---~~-~~~aDiIil~v~~ 81 (274)
.++|.|+|+|.+|..+++.|.+.| .|+++ ++++++.+.+. .|+.+. . +.. ++ ++++|.||+++++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g-----~v~vi-d~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE-----VFVLA-EDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLES 81 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE-----EEEEE-SCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSC
T ss_pred CCEEEEECCChHHHHHHHHHHhCC-----eEEEE-ECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCC
Confidence 468999999999999999998776 27788 99999888777 665432 1 211 22 6789999999987
Q ss_pred ccHHHHHHHhccccCCCCEEEEe
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
+.....+......+.++..+|.-
T Consensus 82 d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 82 DSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEE
T ss_pred cHHHHHHHHHHHHHCCCCeEEEE
Confidence 75544443444445565344433
No 279
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.92 E-value=1.5e-05 Score=69.70 Aligned_cols=92 Identities=17% Similarity=0.182 Sum_probs=64.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce---ec----cCchhhccCCCEEEEeeCc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVK---VL----SDNNAVVEYSDVVVFSVKP 81 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~---~~----~~~~~~~~~aDiIil~v~~ 81 (274)
...+|.|+|+|.+|...++.+...|. +|+++ +|++++.+.+.+.+.. .. .+..+.+.++|+||-|++.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga----~V~v~-dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA----QVQIF-DINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-eCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 34799999999999999999999998 99999 9999998888764321 11 1233456689999999853
Q ss_pred cc--HHH-HHHHhccccCCCCEEEEec
Q 024016 82 QV--VKD-VAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 82 ~~--~~~-v~~~i~~~l~~~~~vis~~ 105 (274)
.. ... +..+....++++..++++.
T Consensus 241 ~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 241 PGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp TTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 22 000 0112223467788888764
No 280
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.92 E-value=4.7e-05 Score=63.81 Aligned_cols=69 Identities=19% Similarity=0.198 Sum_probs=52.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cCchhh-ccCCCEEEEeeC
Q 024016 6 IPAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDNNAV-VEYSDVVVFSVK 80 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~~~~~-~~~aDiIil~v~ 80 (274)
++| +|||.|.|+|.+|+.+++.|++.|+ +|++. +|++++.+.+...++... .|..++ ..++|+||-+..
T Consensus 2 ~~m-~~~ilVtGaG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~ 72 (286)
T 3ius_A 2 NAM-TGTLLSFGHGYTARVLSRALAPQGW----RIIGT-SRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTA 72 (286)
T ss_dssp ----CCEEEEETCCHHHHHHHHHHGGGTC----EEEEE-ESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCC
T ss_pred CCC-cCcEEEECCcHHHHHHHHHHHHCCC----EEEEE-EcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCC
Confidence 444 4799999999999999999999999 99999 999988887776666432 121111 678999999874
No 281
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.92 E-value=1.3e-05 Score=69.01 Aligned_cols=96 Identities=14% Similarity=0.189 Sum_probs=62.7
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCC--CCCCCcEEEEeCCCHHH--HHHHHHcC----cee---ccCchhhccCCCEEE
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSG--VLPPDRICTAVHSNLKR--RDAFESIG----VKV---LSDNNAVVEYSDVVV 76 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g--~~~~~~v~v~~~r~~~~--~~~l~~~g----~~~---~~~~~~~~~~aDiIi 76 (274)
+.|||+||| +|.+|.+++..|...| + +|.++ |++++. ...+.... +.. .++..++++++|+||
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~----ev~l~-Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi 81 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVS----VLHLY-DVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLII 81 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEE----EEEEE-ESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCC----EEEEE-eCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEE
Confidence 347999999 8999999999999888 5 89999 887652 22233311 222 224567789999999
Q ss_pred EeeC-c---------------ccHHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 77 FSVK-P---------------QVVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 77 l~v~-~---------------~~~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
++.. + ..++++++.+... .++..++..++++..
T Consensus 82 ~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SNPv~~ 130 (326)
T 1smk_A 82 VPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISNPVNS 130 (326)
T ss_dssp ECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred EcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCchHH
Confidence 9973 1 1234444555544 356666655565543
No 282
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.90 E-value=3.5e-05 Score=65.99 Aligned_cols=96 Identities=16% Similarity=0.188 Sum_probs=64.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH--HHHHHc--C--cee---ccCchhhccCCCEEEEee-
Q 024016 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR--DAFESI--G--VKV---LSDNNAVVEYSDVVVFSV- 79 (274)
Q Consensus 11 ~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~--~~l~~~--g--~~~---~~~~~~~~~~aDiIil~v- 79 (274)
|||+|||+ |.+|.+++..|...|+ ..+|.++ |+++.+. ..+... . +.. .++..+++++||+||++.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~--~~ev~L~-Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag 77 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL--VSRLTLY-DIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAG 77 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT--CSEEEEE-ESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC--CcEEEEE-eCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCC
Confidence 59999998 9999999999998884 2289999 9886222 223221 1 222 135666789999999997
Q ss_pred -C--c------------ccHHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 80 -K--P------------QVVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 80 -~--~------------~~~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
| + ..++++.+.+..+- |+..++..++++..
T Consensus 78 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv~~ 122 (314)
T 1mld_A 78 VPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPVNS 122 (314)
T ss_dssp CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCcch
Confidence 2 2 12445555565544 66677767776653
No 283
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.90 E-value=2e-05 Score=68.72 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=58.8
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH-H---HHHHHH-----------cCceec-cCchhhcc-C
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLK-R---RDAFES-----------IGVKVL-SDNNAVVE-Y 71 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~-~---~~~l~~-----------~g~~~~-~~~~~~~~-~ 71 (274)
++||+|+| .|.+|..+++.|.++.. .+|... ++++. . ...... ....+. .++.+..+ +
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~---~ev~~i-~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPM---FELTAL-AASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFED 83 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSS---EEEEEE-EECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTT
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCC---CEEEEE-EcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCC
Confidence 46999999 89999999999887542 267666 43221 1 211110 011111 24455446 8
Q ss_pred CCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCC
Q 024016 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 72 aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g 107 (274)
+|+||+|+|.....+....+. ..|..||+.++.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~~---~aG~~VId~s~~ 116 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEFA---KEGKLIFSNASA 116 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHHH---HTTCEEEECCST
T ss_pred CCEEEECCCchHHHHHHHHHH---HCCCEEEECCch
Confidence 999999999888777776654 357779988664
No 284
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.90 E-value=1.2e-05 Score=69.46 Aligned_cols=90 Identities=9% Similarity=0.123 Sum_probs=57.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c------------------CceeccCchhhccC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I------------------GVKVLSDNNAVVEY 71 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~------------------g~~~~~~~~~~~~~ 71 (274)
+||||+|+|.||..+++.|.++.. .++...+++++.....+.. . ++.+..+..++..+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~---~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~ 78 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDD---MKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDE 78 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSS---EEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHT
T ss_pred eEEEEEeECHHHHHHHHHHHcCCC---cEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcC
Confidence 589999999999999999887432 1554433776554433332 2 22222244555678
Q ss_pred CCEEEEeeCcccHHHHHHHhccccCCCCEEEEecC
Q 024016 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 72 aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+|+||.|+|.....+....... .|+.||+.++
T Consensus 79 vDvV~~atp~~~~~~~a~~~l~---aG~~VId~sp 110 (337)
T 1cf2_P 79 ADIVIDCTPEGIGAKNLKMYKE---KGIKAIFQGG 110 (337)
T ss_dssp CSEEEECCSTTHHHHHHHHHHH---HTCCEEECTT
T ss_pred CCEEEECCCchhhHHHHHHHHH---cCCEEEEecC
Confidence 9999999998877666655432 3445665544
No 285
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.89 E-value=8.8e-06 Score=70.45 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=61.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHH----cC--ceeccCchhhcc--CCCEEEEeeC
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-KRRDAFES----IG--VKVLSDNNAVVE--YSDVVVFSVK 80 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-~~~~~l~~----~g--~~~~~~~~~~~~--~aDiIil~v~ 80 (274)
++||||||+|.+|...+..| ..+. +|...+++++ ++.+.+.+ .| ...++|.+++++ +.|+|++|+|
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~----~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 76 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEEC----SITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTV 76 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTE----EEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSS
T ss_pred ceEEEEEccchhHHHHHHhc-CCCc----EEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 46999999999998777777 4454 6664339887 34444433 35 467888888876 4899999999
Q ss_pred cccHHHHHHHhccccCCCCEEEEecCCC
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vis~~~g~ 108 (274)
+....++..... ..|+-|+ +-+++
T Consensus 77 ~~~H~~~~~~al---~aGkhVl-~EKPl 100 (337)
T 3ip3_A 77 FSLNGKILLEAL---ERKIHAF-VEKPI 100 (337)
T ss_dssp HHHHHHHHHHHH---HTTCEEE-ECSSS
T ss_pred cchHHHHHHHHH---HCCCcEE-EeCCC
Confidence 887666655443 3444444 33443
No 286
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.89 E-value=1.6e-05 Score=66.94 Aligned_cols=92 Identities=11% Similarity=0.117 Sum_probs=62.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEeeCcccHHH
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
...+++.|+|+|.+|.+++..|.+.|. .+|+++ +|++++++.+++ .+.....+..+ + ++|+||-|||......
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~---~~v~v~-nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~ 193 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFA---KDIYVV-TRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPK 193 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTC---SEEEEE-ESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTS
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCC---CEEEEE-eCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCC
Confidence 346799999999999999999999986 379999 999999988875 22222233334 4 8999999997542211
Q ss_pred H--HHHhccccCCCCEEEEec
Q 024016 87 V--AMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 87 v--~~~i~~~l~~~~~vis~~ 105 (274)
. ..--...++++.+|+++.
T Consensus 194 ~~~~pi~~~~l~~~~~v~Dlv 214 (282)
T 3fbt_A 194 EGESPVDKEVVAKFSSAVDLI 214 (282)
T ss_dssp TTCCSSCHHHHTTCSEEEESC
T ss_pred CccCCCCHHHcCCCCEEEEEe
Confidence 0 000012245677777765
No 287
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.87 E-value=1.6e-05 Score=71.49 Aligned_cols=75 Identities=15% Similarity=0.212 Sum_probs=55.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC-cee----cc---CchhhccCCCEEEEe
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG-VKV----LS---DNNAVVEYSDVVVFS 78 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g-~~~----~~---~~~~~~~~aDiIil~ 78 (274)
|++++|.|+|+|.+|++++..|.+.|+ +|+++ +|++++++.+.+ .+ +.. .. +..++++++|+||.|
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G~----~V~v~-~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~ 75 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSGI----KVTVA-CRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL 75 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTTC----EEEEE-ESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC----EEEEE-ECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence 345789999999999999999999998 89999 999998887765 22 321 11 223556789999999
Q ss_pred eCcccHHHH
Q 024016 79 VKPQVVKDV 87 (274)
Q Consensus 79 v~~~~~~~v 87 (274)
+|......+
T Consensus 76 a~~~~~~~i 84 (450)
T 1ff9_A 76 IPYTFHATV 84 (450)
T ss_dssp CC--CHHHH
T ss_pred CccccchHH
Confidence 987544333
No 288
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.87 E-value=7.5e-05 Score=64.48 Aligned_cols=92 Identities=17% Similarity=0.151 Sum_probs=61.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHH----cC------------c-------eec--
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFES----IG------------V-------KVL-- 62 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r--~~~~~~~l~~----~g------------~-------~~~-- 62 (274)
++||||+|+|++|..+++.|.+... -+|...+++ +++....+.+ +| + .+.
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~---vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~ 79 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGK---VDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQE 79 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS---SEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCC---cEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEec
Confidence 4699999999999999999887542 266655474 6776666654 11 0 111
Q ss_pred cCchhh-c--cCCCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCC
Q 024016 63 SDNNAV-V--EYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 63 ~~~~~~-~--~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g 107 (274)
.++.++ . .++|+||.|+|.....+..... +..|..+|.++++
T Consensus 80 ~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~---l~aGak~V~iSap 124 (335)
T 1u8f_O 80 RDPSKIKWGDAGAEYVVESTGVFTTMEKAGAH---LQGGAKRVIISAP 124 (335)
T ss_dssp SSGGGCCTTTTTCCEEEECSSSCCSHHHHGGG---GGGTCSEEEESSC
T ss_pred CCHHHCccccCCCCEEEECCCchhhHHHHHHH---HhCCCeEEEeccC
Confidence 244444 1 4789999999988877766543 4456556666554
No 289
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.87 E-value=2.4e-05 Score=66.39 Aligned_cols=92 Identities=15% Similarity=0.185 Sum_probs=67.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH-HHHHHcCceeccCchhhcc--CCCEEEEeeCcccHH
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR-DAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQVVK 85 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~-~~l~~~g~~~~~~~~~~~~--~aDiIil~v~~~~~~ 85 (274)
..++.|+|+ |+||..+++++.+.|+ + .++ ..+|.+. +. -.|+.++.+..++.+ ++|++++++|++...
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g~----~-~V~-~VnP~~~g~~--i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~ 84 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECGT----K-IVG-GVTPGKGGQN--VHGVPVFDTVKEAVKETDANASVIFVPAPFAK 84 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTTC----C-EEE-EECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCC----e-EEE-EeCCCCCCce--ECCEeeeCCHHHHhhcCCCCEEEEccCHHHHH
Confidence 357888898 9999999999999998 5 343 3344321 11 158888888888887 899999999999999
Q ss_pred HHHHHhccccCCCCEEEEecCCCCHH
Q 024016 86 DVAMQIRPLLSRKKLLVSVAAGVKLK 111 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~g~~~~ 111 (274)
+++.+.... .. +.+|-.+.|++.+
T Consensus 85 ~~v~ea~~~-Gi-~~vVi~t~G~~~~ 108 (294)
T 2yv1_A 85 DAVFEAIDA-GI-ELIVVITEHIPVH 108 (294)
T ss_dssp HHHHHHHHT-TC-SEEEECCSCCCHH
T ss_pred HHHHHHHHC-CC-CEEEEECCCCCHH
Confidence 988876543 12 3355567788764
No 290
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.86 E-value=2.7e-05 Score=65.72 Aligned_cols=94 Identities=19% Similarity=0.215 Sum_probs=64.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c-----C--ceecc--CchhhccCCCEEEE
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I-----G--VKVLS--DNNAVVEYSDVVVF 77 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~-----g--~~~~~--~~~~~~~~aDiIil 77 (274)
.+.+++.|+|+|.+|.+++..|.+.|. .+|+++ +|++++++.+.+ . + +...+ +..+.+.++|+||-
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~---~~v~i~-~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVIn 200 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGV---QKLQVA-DLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVN 200 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC---CEEEEE-ECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEE
Confidence 345789999999999999999999996 269999 999999887765 1 1 22222 44566778999999
Q ss_pred eeCcccHHHHHHHh-ccccCCCCEEEEec
Q 024016 78 SVKPQVVKDVAMQI-RPLLSRKKLLVSVA 105 (274)
Q Consensus 78 ~v~~~~~~~v~~~i-~~~l~~~~~vis~~ 105 (274)
|+|......--..+ ...++++.+++++.
T Consensus 201 aTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv 229 (283)
T 3jyo_A 201 ATPMGMPAHPGTAFDVSCLTKDHWVGDVV 229 (283)
T ss_dssp CSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred CCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence 99754221100001 12456777777765
No 291
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.85 E-value=4.3e-05 Score=66.29 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=63.7
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-----cC---ceeccCchhhccCCCEEEEee
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-----IG---VKVLSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-----~g---~~~~~~~~~~~~~aDiIil~v 79 (274)
+++||+|+| .|.+|..+.+.|.+... .++... .+..+.-.++.+ .| +.+ .+..+ +.++|+||+|+
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~---~elv~v-~s~~~~g~~~~~~~~~~~g~~~~~~-~~~~~-~~~vDvV~~a~ 76 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSHPY---LEVKQV-TSRRFAGEPVHFVHPNLRGRTNLKF-VPPEK-LEPADILVLAL 76 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCTT---EEEEEE-BCSTTTTSBGGGTCGGGTTTCCCBC-BCGGG-CCCCSEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcCCC---cEEEEE-ECchhhCchhHHhCchhcCcccccc-cchhH-hcCCCEEEEcC
Confidence 457999999 69999999999987643 266655 333222111221 11 122 22233 47899999999
Q ss_pred CcccHHHHHHHhccccCCCCEEEEecCCCC---HHHHHHhhC
Q 024016 80 KPQVVKDVAMQIRPLLSRKKLLVSVAAGVK---LKDLQEWTG 118 (274)
Q Consensus 80 ~~~~~~~v~~~i~~~l~~~~~vis~~~g~~---~~~l~~~~~ 118 (274)
|.....+...... ..|..+|+.++... .+..++|++
T Consensus 77 g~~~s~~~a~~~~---~aG~~VId~Sa~~r~~~~~~y~~~y~ 115 (345)
T 2ozp_A 77 PHGVFAREFDRYS---ALAPVLVDLSADFRLKDPELYRRYYG 115 (345)
T ss_dssp CTTHHHHTHHHHH---TTCSEEEECSSTTSCSCHHHHHHHHC
T ss_pred CcHHHHHHHHHHH---HCCCEEEEcCccccCCChHHHHhhhc
Confidence 9887777665543 56788999877543 344555543
No 292
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.84 E-value=5.2e-05 Score=64.59 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=69.7
Q ss_pred CCCeEEEE-cc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhcc--CCCEEEEeeCcccH
Q 024016 9 ESFILGFI-GA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSVKPQVV 84 (274)
Q Consensus 9 ~~~~IgiI-G~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDiIil~v~~~~~ 84 (274)
+..+++|| |+ |++|...+++|.+.|+ ++ ++ ..+|.+.. -.-.|+.++.+..++.+ +.|++++++|++..
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~G~----~~-v~-~VnP~~~g-~~i~G~~vy~sl~el~~~~~vD~avI~vP~~~~ 84 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEYGT----NL-VG-GTTPGKGG-KTHLGLPVFNTVKEAKEQTGATASVIYVPPPFA 84 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC----EE-EE-EECTTCTT-CEETTEEEESSHHHHHHHHCCCEEEECCCHHHH
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHCCC----cE-EE-EeCCCcCc-ceECCeeeechHHHhhhcCCCCEEEEecCHHHH
Confidence 44678999 98 9999999999999998 73 33 33443210 00158888888888887 89999999999999
Q ss_pred HHHHHHhccccCCCCEEEEecCCCCHHH
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAAGVKLKD 112 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~g~~~~~ 112 (274)
.+++.+.... .. +.++-.+.|++.+.
T Consensus 85 ~~~~~e~i~~-Gi-~~iv~~t~G~~~~~ 110 (305)
T 2fp4_A 85 AAAINEAIDA-EV-PLVVCITEGIPQQD 110 (305)
T ss_dssp HHHHHHHHHT-TC-SEEEECCCCCCHHH
T ss_pred HHHHHHHHHC-CC-CEEEEECCCCChHH
Confidence 9999876543 12 34555778887653
No 293
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.83 E-value=3.8e-06 Score=67.72 Aligned_cols=78 Identities=10% Similarity=0.088 Sum_probs=54.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHh-CCCCCCCcEEEEeCCCHHHHHHHHHcCce--eccCchhhcc-CCCEEEEeeCcccHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAK-SGVLPPDRICTAVHSNLKRRDAFESIGVK--VLSDNNAVVE-YSDVVVFSVKPQVVK 85 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~-~g~~~~~~v~v~~~r~~~~~~~l~~~g~~--~~~~~~~~~~-~aDiIil~v~~~~~~ 85 (274)
.++|+|||+|++|..+++.+.. .|+ ++..++|.++++..... .|+. ..++..+.++ +.|+|++|+|.....
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~g~----~iVg~~D~dp~k~g~~i-~gv~V~~~~dl~ell~~~ID~ViIA~Ps~~~~ 154 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGESF----ELRGFFDVDPEKVGRPV-RGGVIEHVDLLPQRVPGRIEIALLTVPREAAQ 154 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCSSE----EEEEEEESCTTTTTCEE-TTEEEEEGGGHHHHSTTTCCEEEECSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcCCc----EEEEEEeCCHHHHhhhh-cCCeeecHHhHHHHHHcCCCEEEEeCCchhHH
Confidence 4689999999999999986322 255 66655598887664322 2333 3456666665 589999999988777
Q ss_pred HHHHHhc
Q 024016 86 DVAMQIR 92 (274)
Q Consensus 86 ~v~~~i~ 92 (274)
++...+.
T Consensus 155 ei~~~l~ 161 (211)
T 2dt5_A 155 KAADLLV 161 (211)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 294
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.83 E-value=0.00012 Score=60.27 Aligned_cols=81 Identities=17% Similarity=0.288 Sum_probs=55.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhcc-CCCEEEEeeCcccHHHH
Q 024016 11 FILGFIGA-GKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE-YSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 11 ~~IgiIG~-G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~-~aDiIil~v~~~~~~~v 87 (274)
|||+|+|+ |+||+.+++.+.+. ++ ++....+++ ++..++.. ++|+||-+++|+...+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~----elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p~a~~~~ 61 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDL----TLSAELDAG---------------DPLSLLTDGNTEVVIDFTHPDVVMGN 61 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTC----EEEEEECTT---------------CCTHHHHHTTCCEEEECSCTTTHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC----EEEEEEccC---------------CCHHHHhccCCcEEEEccChHHHHHH
Confidence 58999996 99999999998765 77 776443664 23334443 78999988888888777
Q ss_pred HHHhccccCCCCEEEEecCCCCHHHH
Q 024016 88 AMQIRPLLSRKKLLVSVAAGVKLKDL 113 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~~~g~~~~~l 113 (274)
+..... .|.-+|..+.|.+.+..
T Consensus 62 ~~~a~~---~g~~~VigTTG~~~e~~ 84 (245)
T 1p9l_A 62 LEFLID---NGIHAVVGTTGFTAERF 84 (245)
T ss_dssp HHHHHH---TTCEEEECCCCCCHHHH
T ss_pred HHHHHH---cCCCEEEcCCCCCHHHH
Confidence 765432 34445544557776544
No 295
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.82 E-value=3.1e-05 Score=68.78 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=61.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c------Cceec-------cCchhhccC--CCE
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I------GVKVL-------SDNNAVVEY--SDV 74 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~------g~~~~-------~~~~~~~~~--aDi 74 (274)
+||+|||+|.+|+.+++.|.+.|.+ ..+|.++ +|++++++.+.+ . .+... .+..+++++ +|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~-~~~V~v~-~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREV-FSHITLA-SRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTT-CCEEEEE-ESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC-ceEEEEE-ECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 5899999999999999999998731 0278999 999999887765 1 23211 123345555 899
Q ss_pred EEEeeCcccHHHHHHHhccccCCCCEEEEe
Q 024016 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 75 Iil~v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
||.|+++..-..+..... ..+..++++
T Consensus 80 Vin~ag~~~~~~v~~a~l---~~g~~vvD~ 106 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACL---RTGVPYLDT 106 (405)
T ss_dssp EEECSCGGGHHHHHHHHH---HHTCCEEES
T ss_pred EEECCCcccChHHHHHHH---HhCCCEEEe
Confidence 999998876555554332 234456654
No 296
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.81 E-value=8.4e-06 Score=70.26 Aligned_cols=89 Identities=13% Similarity=0.170 Sum_probs=57.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCC-CC----CCcEE-EEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGV-LP----PDRIC-TAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~-~~----~~~v~-v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~ 82 (274)
+++||||||+|.||+.+++.|.+... +. ..+|. ++ +|++++.+.+. ...+++|..+++ +.|+|+.|++..
T Consensus 2 k~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~-d~~~~~~~~~~--~~~~~~d~~~ll-~iDvVve~t~~~ 77 (332)
T 2ejw_A 2 EALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVL-VRDPRKPRAIP--QELLRAEPFDLL-EADLVVEAMGGV 77 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEE-CSCTTSCCSSC--GGGEESSCCCCT-TCSEEEECCCCS
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEE-ECCHHHhhccC--cccccCCHHHHh-CCCEEEECCCCc
Confidence 45799999999999999999877530 00 01454 55 88876543221 123456777877 899999999866
Q ss_pred c-HHHHHHHhccccCCCCEEEEe
Q 024016 83 V-VKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 83 ~-~~~v~~~i~~~l~~~~~vis~ 104 (274)
. ..+...+. +..|+-||+.
T Consensus 78 ~~a~~~~~~A---L~aGKhVVta 97 (332)
T 2ejw_A 78 EAPLRLVLPA---LEAGIPLITA 97 (332)
T ss_dssp HHHHHHHHHH---HHTTCCEEEC
T ss_pred HHHHHHHHHH---HHcCCeEEEC
Confidence 4 34444332 3456667753
No 297
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.81 E-value=2.1e-05 Score=67.56 Aligned_cols=98 Identities=10% Similarity=0.026 Sum_probs=58.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhC-----CCCCCCcEEEEeCCCHHH---------HH-HHHHcC-cee-ccCchhhc
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKS-----GVLPPDRICTAVHSNLKR---------RD-AFESIG-VKV-LSDNNAVV 69 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~-----g~~~~~~v~v~~~r~~~~---------~~-~l~~~g-~~~-~~~~~~~~ 69 (274)
+|++.||+|||+|+||+.+++.|.+. |. .-+|+..++|+++. .. ...+.| +.. ..+..+.+
T Consensus 1 ~Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~--~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l 78 (325)
T 3ing_A 1 GMKEIRIILMGTGNVGLNVLRIIDASNRRRSAF--SIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDL 78 (325)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHC--C--EEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGG
T ss_pred CCceEEEEEEcCcHHHHHHHHHHHhchhhccCC--CEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHh
Confidence 36678999999999999999999874 22 11444333777542 11 122234 211 11556665
Q ss_pred c--CCCEEEEeeCccc-HHHHHHHhccccCCCCEEEEecC
Q 024016 70 E--YSDVVVFSVKPQV-VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 70 ~--~aDiIil~v~~~~-~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
. +.|+|+.|+|+.. .+...+.+...+..|+-||+...
T Consensus 79 ~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK 118 (325)
T 3ing_A 79 MGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANK 118 (325)
T ss_dssp TTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCc
Confidence 4 5899999998764 34334444445667788886533
No 298
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.78 E-value=0.0001 Score=63.52 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=65.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCC---CCcEEEEeCCC----HHHHHH----HHHc------CceeccCchhhcc
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLP---PDRICTAVHSN----LKRRDA----FESI------GVKVLSDNNAVVE 70 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~---~~~v~v~~~r~----~~~~~~----l~~~------g~~~~~~~~~~~~ 70 (274)
+.|||.|||+ |.+|++++..|+..|+.. ..+|.++ |++ +++.+. +... .+...++..++++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~-Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLL-EIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE-CCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEE-cCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 3479999998 999999999999887521 1268899 998 554432 3321 1233356677889
Q ss_pred CCCEEEEeeC----cc------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 71 YSDVVVFSVK----PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 71 ~aDiIil~v~----~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+||+||++.. +. .++++++.+..+-.++..+|..++++.
T Consensus 83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~ 137 (329)
T 1b8p_A 83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPAN 137 (329)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchH
Confidence 9999999862 11 133444455544336667777776554
No 299
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.77 E-value=0.00015 Score=61.86 Aligned_cols=95 Identities=20% Similarity=0.253 Sum_probs=62.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHH---HHHHHHHc--Cceec----cCchhhccCCCEEEEee
Q 024016 11 FILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTAVHSNLK---RRDAFESI--GVKVL----SDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~---~~~~l~~~--g~~~~----~~~~~~~~~aDiIil~v 79 (274)
|||+||| +|.+|.+++..|... ++. .++.++ |+++. ...++... ...+. ++..+..++||+||++.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~--~el~L~-Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~a 77 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSG--SELSLY-DIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISA 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTT--EEEEEE-CSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCC--ceEEEE-ecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeC
Confidence 6999999 899999999999876 542 379999 98861 12233332 22332 24567789999999987
Q ss_pred C----cc------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 80 K----PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 80 ~----~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
. |. .++++.+.+..+ .|+.+++..++++.
T Consensus 78 g~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd 122 (312)
T 3hhp_A 78 GVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNPVN 122 (312)
T ss_dssp SCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSCHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCcch
Confidence 2 21 123333445544 47777887777654
No 300
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=97.76 E-value=0.0001 Score=63.83 Aligned_cols=87 Identities=14% Similarity=0.128 Sum_probs=57.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHH-c--------------------CceeccCchhh
Q 024016 11 FILGFIGAGKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFES-I--------------------GVKVLSDNNAV 68 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g-~~~~~~v~v~~~r~~~~~~~l~~-~--------------------g~~~~~~~~~~ 68 (274)
+||||+|+|++|..+++.|.+.. + +|..+++++++....+.+ . ++.+..+..+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~----evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~ 78 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDM----EVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDI 78 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSE----EEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGT
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCc----eEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHh
Confidence 59999999999999999998763 4 665553655554433333 1 22222234445
Q ss_pred ccCCCEEEEeeCcccHHHHHHHhccccCCCCEEEE
Q 024016 69 VEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVS 103 (274)
Q Consensus 69 ~~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis 103 (274)
..++|+||.|++.....+..+ ..+++.|+.||+
T Consensus 79 ~~~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~ 111 (343)
T 2yyy_A 79 IEDADIVVDGAPKKIGKQNLE--NIYKPHKVKAIL 111 (343)
T ss_dssp GGGCSEEEECCCTTHHHHHHH--HTTTTTTCEEEE
T ss_pred ccCCCEEEECCCccccHHHHH--HHHHHCCCEEEE
Confidence 568999999998877555543 234566777764
No 301
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.73 E-value=9.4e-05 Score=62.80 Aligned_cols=92 Identities=15% Similarity=0.185 Sum_probs=66.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH-HHHHHcCceeccCchhhcc--C-CCEEEEeeCcccH
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR-DAFESIGVKVLSDNNAVVE--Y-SDVVVFSVKPQVV 84 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~-~~l~~~g~~~~~~~~~~~~--~-aDiIil~v~~~~~ 84 (274)
..+|.|+|+ |+||+.+++++.+.|+ + .++ ..+|.+. +. -.|+.++.+..++.+ . +|++++++|++..
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~----~-~v~-~VnP~~~g~~--i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~ 84 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGT----K-VVA-GVTPGKGGSE--VHGVPVYDSVKEALAEHPEINTSIVFVPAPFA 84 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTC----E-EEE-EECTTCTTCE--ETTEEEESSHHHHHHHCTTCCEEEECCCGGGH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCC----c-EEE-EeCCCCCCce--ECCEeeeCCHHHHhhcCCCCCEEEEecCHHHH
Confidence 357888898 9999999999999998 6 333 3334321 11 158888888888776 5 9999999999999
Q ss_pred HHHHHHhccccCCCCEEEEecCCCCHH
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAAGVKLK 111 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~g~~~~ 111 (274)
.+++.+.... .. +.+|-.+.|++.+
T Consensus 85 ~~~v~ea~~~-Gi-~~vVi~t~G~~~~ 109 (297)
T 2yv2_A 85 PDAVYEAVDA-GI-RLVVVITEGIPVH 109 (297)
T ss_dssp HHHHHHHHHT-TC-SEEEECCCCCCHH
T ss_pred HHHHHHHHHC-CC-CEEEEECCCCCHH
Confidence 9998876643 12 3345466788754
No 302
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.72 E-value=0.00016 Score=58.54 Aligned_cols=95 Identities=16% Similarity=0.211 Sum_probs=65.0
Q ss_pred CCCCCCCC--CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHc-CceeccC--chhhccCCCE
Q 024016 1 MDAFPIPA--ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESI-GVKVLSD--NNAVVEYSDV 74 (274)
Q Consensus 1 ~~~~~~~~--~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-~~~~~l~~~-g~~~~~~--~~~~~~~aDi 74 (274)
|.-+|... +.++|.|||.|.+|..-++.|++.|. +|+++ +++. +..+.+.+. +++.... ..+.+.++|+
T Consensus 20 ~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA----~VtVv-ap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adL 94 (223)
T 3dfz_A 20 RHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQEGA----AITVV-APTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFF 94 (223)
T ss_dssp --CCEEEECCTTCCEEEECCSHHHHHHHHHHGGGCC----CEEEE-CSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSE
T ss_pred cCccccEEEcCCCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-CCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCE
Confidence 33455544 45799999999999999999999998 99999 7654 345555553 3543221 2345788999
Q ss_pred EEEeeCcccHHHHHHHhccccCCCCEEEEe
Q 024016 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 75 Iil~v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
||.|+.+..+...+..... . .+.|..
T Consensus 95 VIaAT~d~~~N~~I~~~ak---~-gi~VNv 120 (223)
T 3dfz_A 95 IVVATNDQAVNKFVKQHIK---N-DQLVNM 120 (223)
T ss_dssp EEECCCCTHHHHHHHHHSC---T-TCEEEC
T ss_pred EEECCCCHHHHHHHHHHHh---C-CCEEEE
Confidence 9999987777666655542 2 355554
No 303
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.71 E-value=3.9e-05 Score=56.18 Aligned_cols=94 Identities=17% Similarity=0.214 Sum_probs=71.8
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHH
Q 024016 10 SFILGFIGA----GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (274)
Q Consensus 10 ~~~IgiIG~----G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~ 85 (274)
.++|+|||+ +..|..+.++|.+.|| +|+-. |+..+.. .|...+.+..++-+ .|++++++|++.+.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~----~V~pV-nP~~~~i-----~G~~~y~sl~dlp~-vDlavi~~p~~~v~ 72 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGH----EFIPV-GRKKGEV-----LGKTIINERPVIEG-VDTVTLYINPQNQL 72 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTC----CEEEE-SSSCSEE-----TTEECBCSCCCCTT-CCEEEECSCHHHHG
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCC----eEEEE-CCCCCcC-----CCeeccCChHHCCC-CCEEEEEeCHHHHH
Confidence 468999998 6799999999999999 89988 7654322 58888888888767 99999999999999
Q ss_pred HHHHHhccccCCCCEEEEecCCCCHHHHHHhh
Q 024016 86 DVAMQIRPLLSRKKLLVSVAAGVKLKDLQEWT 117 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~g~~~~~l~~~~ 117 (274)
+++++.... .... ++ ++.|...+++.+..
T Consensus 73 ~~v~e~~~~-g~k~-v~-~~~G~~~~e~~~~a 101 (122)
T 3ff4_A 73 SEYNYILSL-KPKR-VI-FNPGTENEELEEIL 101 (122)
T ss_dssp GGHHHHHHH-CCSE-EE-ECTTCCCHHHHHHH
T ss_pred HHHHHHHhc-CCCE-EE-ECCCCChHHHHHHH
Confidence 999887653 2333 33 45677655555544
No 304
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.70 E-value=1e-05 Score=64.94 Aligned_cols=79 Identities=15% Similarity=0.182 Sum_probs=54.9
Q ss_pred CCeEEEEcccHHHHHHHHHH--HhCCCCCCCcEEEEeCCCHH-HHHH-HHHcCceec--cCchhhcc--CCCEEEEeeCc
Q 024016 10 SFILGFIGAGKMAESIAKGV--AKSGVLPPDRICTAVHSNLK-RRDA-FESIGVKVL--SDNNAVVE--YSDVVVFSVKP 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L--~~~g~~~~~~v~v~~~r~~~-~~~~-l~~~g~~~~--~~~~~~~~--~aDiIil~v~~ 81 (274)
..+++|+|+|++|.++++.+ .+.|+ ++..+.|.+++ +... .. .|+.+. ++..+.++ +.|++++|+|+
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~----~iVg~~D~dp~~kiG~~~i-~GvpV~~~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKM----QISMAFDLDSNDLVGKTTE-DGIPVYGISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSE----EEEEEEECTTSTTTTCBCT-TCCBEEEGGGHHHHC-CCSCCEEEECSCG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCe----EEEEEEeCCchhccCceeE-CCeEEeCHHHHHHHHHHcCCCEEEEecCc
Confidence 45899999999999999874 23455 66544498887 6532 11 355443 45556665 58999999998
Q ss_pred ccHHHHHHHhcc
Q 024016 82 QVVKDVAMQIRP 93 (274)
Q Consensus 82 ~~~~~v~~~i~~ 93 (274)
....++.+.+..
T Consensus 159 ~~aq~v~d~lv~ 170 (212)
T 3keo_A 159 TEAQEVADILVK 170 (212)
T ss_dssp GGHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 887777776543
No 305
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.69 E-value=2.4e-05 Score=63.90 Aligned_cols=71 Identities=8% Similarity=0.111 Sum_probs=51.3
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHHcCceec----cC---chhhccCCCEEEEe
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFESIGVKVL----SD---NNAVVEYSDVVVFS 78 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g-~~~~~~v~v~~~r~~~~~~~l~~~g~~~~----~~---~~~~~~~aDiIil~ 78 (274)
|.+++|.|.| .|.+|.++++.|++.| + +|+++ +|++++.+.+...++... .+ ..++++++|+||.+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~----~V~~~-~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~ 95 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTI----KQTLF-ARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYAN 95 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTE----EEEEE-ESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCc----eEEEE-EcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEc
Confidence 4456899998 6999999999999999 8 99999 999887654433343321 12 23456789999988
Q ss_pred eCccc
Q 024016 79 VKPQV 83 (274)
Q Consensus 79 v~~~~ 83 (274)
.....
T Consensus 96 a~~~~ 100 (236)
T 3qvo_A 96 LTGED 100 (236)
T ss_dssp CCSTT
T ss_pred CCCCc
Confidence 75443
No 306
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.69 E-value=0.00014 Score=59.11 Aligned_cols=68 Identities=19% Similarity=0.274 Sum_probs=54.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc-eec-----cCchhhccCCCEEEEeeC
Q 024016 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV-KVL-----SDNNAVVEYSDVVVFSVK 80 (274)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~-~~~-----~~~~~~~~~aDiIil~v~ 80 (274)
++.|+|.|.|+ |.+|+.+++.|++.|+ +|++. +|++++.+.+...++ ... .+..+.+.++|+||-+..
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~----~V~~~-~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGH----EPVAM-VRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCC----eEEEE-ECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCC
Confidence 35689999987 9999999999999999 99999 999998888776666 432 334566778999998874
No 307
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.68 E-value=2e-05 Score=67.24 Aligned_cols=93 Identities=13% Similarity=0.050 Sum_probs=62.6
Q ss_pred CCCCCCCeEEEEcccHH-HHHHHHHHHhCCCCCCCcEEEEeCCCHHH----HHHHHHcCcee-----c--cCchhhccCC
Q 024016 5 PIPAESFILGFIGAGKM-AESIAKGVAKSGVLPPDRICTAVHSNLKR----RDAFESIGVKV-----L--SDNNAVVEYS 72 (274)
Q Consensus 5 ~~~~~~~~IgiIG~G~m-G~~~a~~L~~~g~~~~~~v~v~~~r~~~~----~~~l~~~g~~~-----~--~~~~~~~~~a 72 (274)
+.....+++.|||.|.| |..+++.|...|. +|+++ +|+..+ .+.+...-... + .+..+.+.+|
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gA----tVtv~-nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGA----TVYSV-DVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSC----EEEEE-CSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCC----EEEEE-eCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccC
Confidence 33456789999999986 9999999999997 89999 998432 22222110111 1 4567788999
Q ss_pred CEEEEeeCcccHHHHHHHhccccCCCCEEEEecC
Q 024016 73 DVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 73 DiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
|+||.+++.... ++. ...+++|.++|++..
T Consensus 247 DIVIsAtg~p~~--vI~--~e~vk~GavVIDVgi 276 (320)
T 1edz_A 247 DVVITGVPSENY--KFP--TEYIKEGAVCINFAC 276 (320)
T ss_dssp SEEEECCCCTTC--CBC--TTTSCTTEEEEECSS
T ss_pred CEEEECCCCCcc--eeC--HHHcCCCeEEEEcCC
Confidence 999999964310 010 123578888888744
No 308
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.66 E-value=0.00011 Score=60.75 Aligned_cols=78 Identities=12% Similarity=0.143 Sum_probs=55.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHHHHH------cCceec--
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDAFES------IGVKVL-- 62 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-------------------~~~~~l~~------~g~~~~-- 62 (274)
..+|.|||+|.+|+.++..|...|. .+|+++ |++. .|++.+++ .++.+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv---~~i~lv-D~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV---GNLTLL-DFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-CCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC---CeEEEE-cCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 3689999999999999999999996 378999 9887 56655543 133221
Q ss_pred c------CchhhccCCCEEEEeeCcccHHHHHHHh
Q 024016 63 S------DNNAVVEYSDVVVFSVKPQVVKDVAMQI 91 (274)
Q Consensus 63 ~------~~~~~~~~aDiIil~v~~~~~~~v~~~i 91 (274)
. +..+.++++|+||.|++....+..+...
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~ 141 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAG 141 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHH
T ss_pred eccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 1 1234567889999998765555555443
No 309
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.65 E-value=0.00038 Score=61.80 Aligned_cols=112 Identities=17% Similarity=0.268 Sum_probs=70.2
Q ss_pred CCeEEEEcccHH-HHHHHHHHHh--CCCCCCCcEEEEeCCCHHHHHHHHH-------cCcee--ccCchhhccCCCEEEE
Q 024016 10 SFILGFIGAGKM-AESIAKGVAK--SGVLPPDRICTAVHSNLKRRDAFES-------IGVKV--LSDNNAVVEYSDVVVF 77 (274)
Q Consensus 10 ~~~IgiIG~G~m-G~~~a~~L~~--~g~~~~~~v~v~~~r~~~~~~~l~~-------~g~~~--~~~~~~~~~~aDiIil 77 (274)
++||+|||+|.. +..+...|+. .+. +..+|.++ |.++++++.... ...++ ++|..+++++||+||+
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l-~~~el~L~-Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Vii 79 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDV-RIDEVIFY-DIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIF 79 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTS-CCCEEEEE-CSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCC-CcCEEEEE-eCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEE
Confidence 479999999984 2222334455 432 23489999 999988654222 11333 3455688899999999
Q ss_pred eeCcc------------------------------------cHHHHHHHhccccCCCCEEEEecCCCCH--HHHHHhhCC
Q 024016 78 SVKPQ------------------------------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL--KDLQEWTGH 119 (274)
Q Consensus 78 ~v~~~------------------------------------~~~~v~~~i~~~l~~~~~vis~~~g~~~--~~l~~~~~~ 119 (274)
+.-.. .+.++++.+..+ . +..++..+|++.. ..+.+..|.
T Consensus 80 tagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~-~-~A~lin~TNPvdi~t~a~~k~~p~ 157 (417)
T 1up7_A 80 QFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKT-S-NATIVNFTNPSGHITEFVRNYLEY 157 (417)
T ss_dssp CCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHT-T-CCEEEECSSSHHHHHHHHHHTTCC
T ss_pred cCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHH-C-CEEEEEeCChHHHHHHHHHHhCCC
Confidence 98321 134555556654 4 7889988888763 344454554
Q ss_pred CceEEE
Q 024016 120 SRFIRV 125 (274)
Q Consensus 120 ~~~~~~ 125 (274)
.+++..
T Consensus 158 ~rviG~ 163 (417)
T 1up7_A 158 EKFIGL 163 (417)
T ss_dssp SSEEEC
T ss_pred CCEEEe
Confidence 466654
No 310
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.65 E-value=3.2e-05 Score=67.00 Aligned_cols=94 Identities=14% Similarity=0.255 Sum_probs=58.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHcCceecc-CchhhccCCCEEEEeeCcccHHH
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESIGVKVLS-DNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-~~~~~l~~~g~~~~~-~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
++||+|+| .|.+|..+.+.|.+.+| +..++...++++. .+.-.+....+.+.+ ++ +.+.++|+||+|+|.....+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~-~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~-~~~~~~DvV~~a~g~~~s~~ 83 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDF-PLHRLHLLASAESAGQRMGFAESSLRVGDVDS-FDFSSVGLAFFAAAAEVSRA 83 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTC-CCSCEEEEECTTTTTCEEEETTEEEECEEGGG-CCGGGCSEEEECSCHHHHHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEEecCCCCCCccccCCcceEEecCCH-HHhcCCCEEEEcCCcHHHHH
Confidence 47999999 79999999999987666 3335555524332 110001101112211 22 23568999999999887767
Q ss_pred HHHHhccccCCCCEEEEecCCC
Q 024016 87 VAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~g~ 108 (274)
...... ..|..+|+.++..
T Consensus 84 ~a~~~~---~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 84 HAERAR---AAGCSVIDLSGAL 102 (340)
T ss_dssp HHHHHH---HTTCEEEETTCTT
T ss_pred HHHHHH---HCCCEEEEeCCCC
Confidence 666543 3566788776554
No 311
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.65 E-value=8.8e-05 Score=63.98 Aligned_cols=102 Identities=15% Similarity=0.162 Sum_probs=65.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH--H---HHHHH----HHc-Cceecc--CchhhccCCCEEEE
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL--K---RRDAF----ESI-GVKVLS--DNNAVVEYSDVVVF 77 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~--~---~~~~l----~~~-g~~~~~--~~~~~~~~aDiIil 77 (274)
+||+|+| .|.+|..+.+.|.+... .++.....++. + +.... ... ...+.+ +..+..+++|+||+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~---~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~ 81 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPH---MNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFL 81 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTT---EEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEE
T ss_pred eEEEEECCCChHHHHHHHHHHhCCC---CcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEE
Confidence 6999999 59999999998887432 25654423331 1 22211 111 233322 34444489999999
Q ss_pred eeCcccHHHHHHHhccccCCCCEEEEecCCCC---HHHHHHhhC
Q 024016 78 SVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK---LKDLQEWTG 118 (274)
Q Consensus 78 ~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~---~~~l~~~~~ 118 (274)
|+|.....+....+. ..|..+|+.++... .+.-.+|++
T Consensus 82 a~p~~~s~~~~~~~~---~~g~~vIDlSa~fR~~d~~v~~~wy~ 122 (337)
T 3dr3_A 82 ATAHEVSHDLAPQFL---EAGCVVFDLSGAFRVNDATFYEKYYG 122 (337)
T ss_dssp CSCHHHHHHHHHHHH---HTTCEEEECSSTTSSSCHHHHHHHTS
T ss_pred CCChHHHHHHHHHHH---HCCCEEEEcCCccccCCcccchhhcc
Confidence 999988887777654 46788999988763 334445554
No 312
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.64 E-value=2.6e-05 Score=67.15 Aligned_cols=91 Identities=18% Similarity=0.189 Sum_probs=57.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhC---------CCCCCCcEEEEeCCCHHHHH------HHHH--cCceecc--Cchhhcc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKS---------GVLPPDRICTAVHSNLKRRD------AFES--IGVKVLS--DNNAVVE 70 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~---------g~~~~~~v~v~~~r~~~~~~------~l~~--~g~~~~~--~~~~~~~ 70 (274)
++||||||+|.||+.+++.|.+. +. +|...++|++++.+ .+.. ....+++ |..++++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~----~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~ 77 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEF----KVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVR 77 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCE----EEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCE----EEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhc
Confidence 46999999999999999999875 33 55544488754422 1211 1123333 7777765
Q ss_pred --CCCEEEEeeCcccH-HHHHHHhccccCCCCEEEEe
Q 024016 71 --YSDVVVFSVKPQVV-KDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 71 --~aDiIil~v~~~~~-~~v~~~i~~~l~~~~~vis~ 104 (274)
+.|+|+.|+|++.. .+..+.+...+..|+-|++-
T Consensus 78 ~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 78 SADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp HSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred CCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 58999999997742 11222333445677777754
No 313
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=97.64 E-value=7.6e-05 Score=64.50 Aligned_cols=87 Identities=15% Similarity=0.192 Sum_probs=54.4
Q ss_pred CCCCCCCCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCH----HHHHH---HHHcCceec-c---C---c
Q 024016 1 MDAFPIPAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNL----KRRDA---FESIGVKVL-S---D---N 65 (274)
Q Consensus 1 ~~~~~~~~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~----~~~~~---l~~~g~~~~-~---~---~ 65 (274)
|+.-+.+|.+|+|.|+|+ |.+|+.+++.|++.|+ +|++. .|++ ++.+. +...++.+. . + .
T Consensus 1 M~~s~~~M~~~~IlVtGatG~iG~~l~~~L~~~g~----~V~~l-~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l 75 (346)
T 3i6i_A 1 MTVSPVPSPKGRVLIAGATGFIGQFVATASLDAHR----PTYIL-ARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAM 75 (346)
T ss_dssp ----------CCEEEECTTSHHHHHHHHHHHHTTC----CEEEE-ECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHH
T ss_pred CCCCCCCCCCCeEEEECCCcHHHHHHHHHHHHCCC----CEEEE-ECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHH
Confidence 555666777889999997 9999999999999998 99999 8866 44443 333565432 1 2 2
Q ss_pred hhhcc--CCCEEEEeeCcc---cHHHHHHHhc
Q 024016 66 NAVVE--YSDVVVFSVKPQ---VVKDVAMQIR 92 (274)
Q Consensus 66 ~~~~~--~aDiIil~v~~~---~~~~v~~~i~ 92 (274)
.++++ ++|+||.+.... ....+++...
T Consensus 76 ~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~ 107 (346)
T 3i6i_A 76 EKILKEHEIDIVVSTVGGESILDQIALVKAMK 107 (346)
T ss_dssp HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHH
T ss_pred HHHHhhCCCCEEEECCchhhHHHHHHHHHHHH
Confidence 34566 899999998643 2345554443
No 314
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.61 E-value=9.2e-05 Score=64.37 Aligned_cols=92 Identities=16% Similarity=0.279 Sum_probs=57.8
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--------------cCceecc-CchhhccCC
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--------------IGVKVLS-DNNAVVEYS 72 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~--------------~g~~~~~-~~~~~~~~a 72 (274)
+++||+|+| .|.+|..+.+.|.+... .++...++.+....+.+.+ ..+.+.+ ++.+ +.++
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~---~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~v 78 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPY---LELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDV 78 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSS---EEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTC
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCC---cEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCC
Confidence 467999999 89999999998876532 2666552222121111211 1122221 3333 4789
Q ss_pred CEEEEeeCcccHHHHHHHhccccCCCCEEEEecCC
Q 024016 73 DVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 73 DiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g 107 (274)
|+||+|+|.....+...... ..|..||+.++.
T Consensus 79 DvVf~atp~~~s~~~a~~~~---~aG~~VId~s~~ 110 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELV---KNGKIVVSNASP 110 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHH---HTTCEEEECSST
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEECCcc
Confidence 99999999887777666544 356778987654
No 315
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.60 E-value=0.00057 Score=54.87 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=51.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cCc----hhhccCCCEEEEeeC
Q 024016 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SDN----NAVVEYSDVVVFSVK 80 (274)
Q Consensus 11 ~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~~----~~~~~~aDiIil~v~ 80 (274)
|||.|.|+ |.+|+.+++.|++.|+ +|++. .|++++.+.+...++... .|. .+.+.++|+||-+..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH----EVLAV-VRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC----EEEEE-EecccccccccCCCceEEecccccccHhhcccCCEEEECCc
Confidence 58999987 9999999999999999 99999 999988877655455421 111 245778999999873
No 316
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.59 E-value=0.00024 Score=59.30 Aligned_cols=92 Identities=20% Similarity=0.218 Sum_probs=63.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-c-----CceeccCchhhccCCCEEEEeeCcc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-I-----GVKVLSDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~-----g~~~~~~~~~~~~~aDiIil~v~~~ 82 (274)
..+++.|+|+|-.+++++..|.+.|. .+|+++ ||+.++++.+.+ . ..... ...+..+++|+||=|+|..
T Consensus 124 ~~~~~lilGaGGaarai~~aL~~~g~---~~i~i~-nRt~~ra~~la~~~~~~~~~~~~~-~~~~~~~~~dliiNaTp~G 198 (269)
T 3tum_A 124 AGKRALVIGCGGVGSAIAYALAEAGI---ASITLC-DPSTARMGAVCELLGNGFPGLTVS-TQFSGLEDFDLVANASPVG 198 (269)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCHHHHHHHHHHHHHHCTTCEEE-SCCSCSTTCSEEEECSSTT
T ss_pred ccCeEEEEecHHHHHHHHHHHHHhCC---CeEEEe-CCCHHHHHHHHHHHhccCCcceeh-hhhhhhhcccccccCCccc
Confidence 45789999999999999999999986 389999 999999988876 1 22232 2334467899999998743
Q ss_pred cHH----HHHHHhccccCCCCEEEEec
Q 024016 83 VVK----DVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 83 ~~~----~v~~~i~~~l~~~~~vis~~ 105 (274)
.-. .+-......++++.++.++.
T Consensus 199 m~~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 199 MGTRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp CSTTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred cCCCCCCCCChHHHhccCCCcEEEEEc
Confidence 211 01111223356677777664
No 317
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.58 E-value=6.8e-05 Score=64.68 Aligned_cols=89 Identities=11% Similarity=0.084 Sum_probs=57.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCC--------CCCCCcEE-EEeCCCHHHHHH------HH----HcCce-ecc---C
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSG--------VLPPDRIC-TAVHSNLKRRDA------FE----SIGVK-VLS---D 64 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g--------~~~~~~v~-v~~~r~~~~~~~------l~----~~g~~-~~~---~ 64 (274)
|+++||||||+|.||+.+++.|.+.. + +|. ++ +|++++.+. +. ..++. +++ |
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~----~vvaV~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 78 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKF----NVVFVA-DSLHSYYNERIDIGKVISYKEKGSLDSLEYESIS 78 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEE----EEEEEE-CSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECC
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcE----EEEEEE-ECChHHhhcccChHHHhhhhccCCcccccCCCCC
Confidence 55689999999999999999987642 3 554 55 888765432 11 12332 333 6
Q ss_pred chhhc-cCCCEEEEeeCcc----cHHHHHHHhccccCCCCEEEEe
Q 024016 65 NNAVV-EYSDVVVFSVKPQ----VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 65 ~~~~~-~~aDiIil~v~~~----~~~~v~~~i~~~l~~~~~vis~ 104 (274)
..+++ .+.|+|+.|+|+. ...+.+.. .+..|+-||+.
T Consensus 79 ~~~ll~~~iDvVv~~t~~~~~~~~~~~~~~~---AL~aGkhVvta 120 (331)
T 3c8m_A 79 ASEALARDFDIVVDATPASADGKKELAFYKE---TFENGKDVVTA 120 (331)
T ss_dssp HHHHHHSSCSEEEECSCCCSSSHHHHHHHHH---HHHTTCEEEEC
T ss_pred HHHHhCCCCCEEEECCCCCCccchHHHHHHH---HHHCCCeEEec
Confidence 66665 3689999999885 33333332 34567777764
No 318
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=97.57 E-value=3.2e-05 Score=66.84 Aligned_cols=96 Identities=13% Similarity=0.181 Sum_probs=59.4
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCC-HHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHH
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSN-LKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~-~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
+++||+|+| .|.+|..+.+.|.++++ +..++...++++ ..+.-.+....+.+.+...+...++|+||+|+|.....+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~-p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~s~~ 80 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREF-PVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSAK 80 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHHHHH
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCC-CCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchHHHH
Confidence 357999999 99999999999988743 222566553432 211000111112221111223468999999999887777
Q ss_pred HHHHhccccCCCCEEEEecCCC
Q 024016 87 VAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~g~ 108 (274)
...... ..|..+|+.++..
T Consensus 81 ~a~~~~---~~G~~vId~s~~~ 99 (336)
T 2r00_A 81 WAPIAA---EAGVVVIDNTSHF 99 (336)
T ss_dssp HHHHHH---HTTCEEEECSSTT
T ss_pred HHHHHH---HcCCEEEEcCCcc
Confidence 666543 4577889887654
No 319
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.57 E-value=0.0002 Score=61.56 Aligned_cols=68 Identities=19% Similarity=0.257 Sum_probs=52.6
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHHHcCceec--cCchhhc-cCCCEEEEe--eCc
Q 024016 10 SFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNL--KRRDAFESIGVKVL--SDNNAVV-EYSDVVVFS--VKP 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~-~a~~L~~~g~~~~~~v~v~~~r~~--~~~~~l~~~g~~~~--~~~~~~~-~~aDiIil~--v~~ 81 (274)
++||.|||.|.+|.+ +|+.|.+.|+ +|+++ |+++ ...+.|.+.|+.+. .++.++. .++|+|+.+ +|+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~----~V~~~-D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~ 78 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGF----EVSGC-DAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKR 78 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTC----EEEEE-ESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCC----EEEEE-cCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCC
Confidence 478999999999996 9999999999 99999 8764 34567777888764 3444444 479999986 454
Q ss_pred c
Q 024016 82 Q 82 (274)
Q Consensus 82 ~ 82 (274)
+
T Consensus 79 ~ 79 (326)
T 3eag_A 79 G 79 (326)
T ss_dssp T
T ss_pred C
Confidence 4
No 320
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.56 E-value=9.9e-05 Score=62.17 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=56.1
Q ss_pred CCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHH
Q 024016 7 PAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~-mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~ 85 (274)
+...+++.|||.|. +|.+++..|.+.|. +|+++ +|.....+ ..+.+++||+||.+++...+
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~-~~~T~~l~------------l~~~~~~ADIVI~Avg~p~~- 223 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENA----TVTIV-HSGTSTED------------MIDYLRTADIVIAAMGQPGY- 223 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTSCHHH------------HHHHHHTCSEEEECSCCTTC-
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC----eEEEE-eCCCCCch------------hhhhhccCCEEEECCCCCCC-
Confidence 34568999999887 79999999999998 99999 87432111 12678899999999974221
Q ss_pred HHHHHhccccCCCCEEEEe
Q 024016 86 DVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~ 104 (274)
+. ...+++|.+||++
T Consensus 224 --I~--~~~vk~GavVIDv 238 (300)
T 4a26_A 224 --VK--GEWIKEGAAVVDV 238 (300)
T ss_dssp --BC--GGGSCTTCEEEEC
T ss_pred --Cc--HHhcCCCcEEEEE
Confidence 11 1346899999986
No 321
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.56 E-value=0.00011 Score=61.17 Aligned_cols=71 Identities=13% Similarity=0.257 Sum_probs=55.8
Q ss_pred CCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCc-ccHHH
Q 024016 9 ESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKP-QVVKD 86 (274)
Q Consensus 9 ~~~~IgiIG~G~-mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~-~~~~~ 86 (274)
..+++.|||.|. +|.+++..|.+.|. +|+++ +++. .+..+.+++||+||.+++. ..+.
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gA----tVtv~-~~~t--------------~~L~~~~~~ADIVI~Avg~p~~I~- 208 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNY----TVSVC-HSKT--------------KDIGSMTRSSKIVVVAVGRPGFLN- 208 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SCHHHHHHHSSEEEECSSCTTCBC-
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCC----eEEEE-eCCc--------------ccHHHhhccCCEEEECCCCCcccc-
Confidence 457999999986 89999999999998 99999 7642 3566788999999999963 3221
Q ss_pred HHHHhccccCCCCEEEEe
Q 024016 87 VAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~ 104 (274)
..++++|.+||++
T Consensus 209 -----~~~vk~GavVIDv 221 (276)
T 3ngx_A 209 -----REMVTPGSVVIDV 221 (276)
T ss_dssp -----GGGCCTTCEEEEC
T ss_pred -----HhhccCCcEEEEe
Confidence 1346889888876
No 322
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.55 E-value=0.00021 Score=59.79 Aligned_cols=74 Identities=12% Similarity=0.227 Sum_probs=56.8
Q ss_pred CCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHH
Q 024016 7 PAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~-mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~ 85 (274)
....+++.|||.|. +|.+++..|...|. +|+++ +|+. .+..+.+++||+||.+++...+
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~-hs~t--------------~~L~~~~~~ADIVI~Avg~p~~- 217 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKA----TVTTC-HRFT--------------TDLKSHTTKADILIVAVGKPNF- 217 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SSHHHHHTTCSEEEECCCCTTC-
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC----eEEEE-eCCc--------------hhHHHhcccCCEEEECCCCCCC-
Confidence 44668999999987 79999999999998 99999 7642 3556778999999999963221
Q ss_pred HHHHHhccccCCCCEEEEe
Q 024016 86 DVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~ 104 (274)
+. ...+++|.+||++
T Consensus 218 --I~--~~~vk~GavVIDv 232 (285)
T 3l07_A 218 --IT--ADMVKEGAVVIDV 232 (285)
T ss_dssp --BC--GGGSCTTCEEEEC
T ss_pred --CC--HHHcCCCcEEEEe
Confidence 11 1346889888876
No 323
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.55 E-value=0.00062 Score=54.42 Aligned_cols=64 Identities=19% Similarity=0.285 Sum_probs=50.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cC----chhhccCCCEEEEeeC
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD----NNAVVEYSDVVVFSVK 80 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~----~~~~~~~aDiIil~v~ 80 (274)
|||.|+| .|.+|+.+++.|++.|+ +|++. +|++++.+.+. .++... .| ..+.+.++|+||.+..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH----EVTAI-VRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYG 70 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC----EEEEE-EcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCc
Confidence 5899999 59999999999999999 99999 99988877664 344321 11 1256778999999874
No 324
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.54 E-value=0.0004 Score=60.21 Aligned_cols=89 Identities=19% Similarity=0.248 Sum_probs=61.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhcc-CCCEEEEeeCcccH-H
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE-YSDVVVFSVKPQVV-K 85 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~-~aDiIil~v~~~~~-~ 85 (274)
...++|+|+|.|++|...++.|...|. +|+++ |+++++.+...+.|++.. +..+++. +||+++-|--...+ .
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~Ga----kVvvs-D~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~ 246 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGA----QLLVA-DTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITT 246 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC----EEEEE-eCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCH
Confidence 456899999999999999999999998 99988 999876333333677654 4556666 89999865333222 2
Q ss_pred HHHHHhccccCCCCEEEEecCC
Q 024016 86 DVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~g 107 (274)
+-+.. ++ .++|+...++
T Consensus 247 ~~~~~----lk-~~iVie~AN~ 263 (355)
T 1c1d_A 247 EVART----LD-CSVVAGAANN 263 (355)
T ss_dssp HHHHH----CC-CSEECCSCTT
T ss_pred HHHhh----CC-CCEEEECCCC
Confidence 33333 33 4577766554
No 325
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.51 E-value=0.00015 Score=58.34 Aligned_cols=66 Identities=20% Similarity=0.251 Sum_probs=50.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHH-hCCCCCCCcEEEEeCCCHH-HHHHHHH--cCceec-------cCchhhccCCCEEEEe
Q 024016 11 FILGFIG-AGKMAESIAKGVA-KSGVLPPDRICTAVHSNLK-RRDAFES--IGVKVL-------SDNNAVVEYSDVVVFS 78 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~-~~g~~~~~~v~v~~~r~~~-~~~~l~~--~g~~~~-------~~~~~~~~~aDiIil~ 78 (274)
++|.|.| .|.+|.++++.|+ +.|+ +|++. +|+++ +.+.+.. .++... .+..++++++|+||.+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ 80 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM----HITLY-GRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVG 80 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC----EEEEE-ESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEES
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc----eEEEE-ecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEc
Confidence 3499998 5999999999999 8999 99999 99998 8777642 333321 1223456789999998
Q ss_pred eCc
Q 024016 79 VKP 81 (274)
Q Consensus 79 v~~ 81 (274)
...
T Consensus 81 ag~ 83 (221)
T 3r6d_A 81 AME 83 (221)
T ss_dssp CCC
T ss_pred CCC
Confidence 854
No 326
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=97.50 E-value=0.00021 Score=61.59 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=57.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHH----cCc---------------------eec
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFES----IGV---------------------KVL 62 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r--~~~~~~~l~~----~g~---------------------~~~ 62 (274)
++||||+|+|++|..+++.|.+... .+|...+++ +++....+.+ +|. .+.
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~p~---vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQSED---VELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSS---EEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEE
T ss_pred ceEEEEECcCHHHHHHHHHHhCCCC---eEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEE
Confidence 3599999999999999999887532 266655463 5555545432 120 112
Q ss_pred c--Cchhh-c--cCCCEEEEeeCcccHHHHHHHhccccCCCC--EEEEec
Q 024016 63 S--DNNAV-V--EYSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVA 105 (274)
Q Consensus 63 ~--~~~~~-~--~~aDiIil~v~~~~~~~v~~~i~~~l~~~~--~vis~~ 105 (274)
. ++.++ . .++|+||.|+|.....+...... ..|. +||+..
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l---~aGak~VVIs~p 126 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHL---KGGAKKVVISAP 126 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHH---HTTCSEEEESSC
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHH---HcCCCEEEEecC
Confidence 1 44443 1 47999999999887777665543 3344 777653
No 327
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.49 E-value=0.00085 Score=59.75 Aligned_cols=97 Identities=15% Similarity=0.255 Sum_probs=64.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeC----CC----HH-HHHHHHH--------cCce-eccCchhhc
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVH----SN----LK-RRDAFES--------IGVK-VLSDNNAVV 69 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~----r~----~~-~~~~l~~--------~g~~-~~~~~~~~~ 69 (274)
.+..||.|+|+|.+|.+++..|.+.|. +..+|+++ | |+ .. +.+.+.. .+.. ...+..+++
T Consensus 184 l~~~rvlvlGAGgAg~aia~~L~~~G~-~~~~I~vv-d~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l 261 (439)
T 2dvm_A 184 ISEITLALFGAGAAGFATLRILTEAGV-KPENVRVV-ELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEAL 261 (439)
T ss_dssp TTTCCEEEECCSHHHHHHHHHHHHTTC-CGGGEEEE-EEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCC-CcCeEEEE-EccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHh
Confidence 345789999999999999999999984 22489999 8 76 22 2111221 1110 123456778
Q ss_pred cCCCEEEEeeCc--ccHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 70 EYSDVVVFSVKP--QVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 70 ~~aDiIil~v~~--~~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+++|++|-+++. ..+.+ +....+.++.+|+++.++.+
T Consensus 262 ~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDLynP~~ 300 (439)
T 2dvm_A 262 KDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPLANPVP 300 (439)
T ss_dssp TTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEECCSSSC
T ss_pred ccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEECCCCCC
Confidence 899999999986 54432 12233567788888866653
No 328
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.48 E-value=0.0003 Score=60.07 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=63.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC---HHHHHHHHH-----cCc--eec--cC---chhhccCC
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN---LKRRDAFES-----IGV--KVL--SD---NNAVVEYS 72 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~---~~~~~~l~~-----~g~--~~~--~~---~~~~~~~a 72 (274)
.+.+++.|+|+|.+|.+++..|.+.|. .+|+++ +|+ .++++++.+ .+. ... ++ ..+.+.++
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga---~~V~i~-nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 227 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGV---KEISIF-NRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAES 227 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-ECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTC
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCC---CEEEEE-ECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCC
Confidence 456799999999999999999999986 379999 999 888877764 232 221 12 23446689
Q ss_pred CEEEEeeCcccHHH----HHHHhccccCCCCEEEEec
Q 024016 73 DVVVFSVKPQVVKD----VAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 73 DiIil~v~~~~~~~----v~~~i~~~l~~~~~vis~~ 105 (274)
|+||-|+|...... .+. ....++++.+|+++.
T Consensus 228 DiIINaTp~Gm~~~~~~~p~~-~~~~l~~~~~V~Dlv 263 (315)
T 3tnl_A 228 VIFTNATGVGMKPFEGETLLP-SADMLRPELIVSDVV 263 (315)
T ss_dssp SEEEECSSTTSTTSTTCCSCC-CGGGCCTTCEEEESC
T ss_pred CEEEECccCCCCCCCCCCCCC-cHHHcCCCCEEEEec
Confidence 99999998543211 010 122356777777764
No 329
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.47 E-value=0.00059 Score=61.68 Aligned_cols=68 Identities=16% Similarity=0.271 Sum_probs=46.6
Q ss_pred CeEEEEcccHHHHH--HHHHHHhCCCCC--CCcEEEEeCCCHHHHHHHH-------H-cC----ceeccCchhhccCCCE
Q 024016 11 FILGFIGAGKMAES--IAKGVAKSGVLP--PDRICTAVHSNLKRRDAFE-------S-IG----VKVLSDNNAVVEYSDV 74 (274)
Q Consensus 11 ~~IgiIG~G~mG~~--~a~~L~~~g~~~--~~~v~v~~~r~~~~~~~l~-------~-~g----~~~~~~~~~~~~~aDi 74 (274)
|||+|||+|+.|.+ +...+.....++ ..+|.++ |.++++++... + .| +..++|..+++++||+
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~-Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~ 79 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLM-DVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADF 79 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEE-CSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEE-CCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCE
Confidence 69999999998754 444454432211 2379999 99998865322 1 23 3345677888999999
Q ss_pred EEEee
Q 024016 75 VVFSV 79 (274)
Q Consensus 75 Iil~v 79 (274)
||++.
T Consensus 80 Vi~~~ 84 (477)
T 3u95_A 80 IINTA 84 (477)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 99986
No 330
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.46 E-value=0.00027 Score=60.32 Aligned_cols=94 Identities=18% Similarity=0.226 Sum_probs=62.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC---HHHHHHHHH-----cCce--ec--cCc---hhhccCC
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN---LKRRDAFES-----IGVK--VL--SDN---NAVVEYS 72 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~---~~~~~~l~~-----~g~~--~~--~~~---~~~~~~a 72 (274)
...+++.|+|+|.+|.+++..|.+.|. .+|+++ +|+ .++++.+.+ .+.. .. .+. .+.+.++
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~---~~v~v~-nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~ 221 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGI---KEIKLF-NRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASA 221 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-ECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHC
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCC---CEEEEE-ECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCc
Confidence 346799999999999999999999986 379999 999 888877764 2322 21 121 3446678
Q ss_pred CEEEEeeCcccHHHHHHHh---ccccCCCCEEEEec
Q 024016 73 DVVVFSVKPQVVKDVAMQI---RPLLSRKKLLVSVA 105 (274)
Q Consensus 73 DiIil~v~~~~~~~v~~~i---~~~l~~~~~vis~~ 105 (274)
|+||-|+|...-..--..+ ...++++.+++++.
T Consensus 222 DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 257 (312)
T 3t4e_A 222 DILTNGTKVGMKPLENESLIGDVSLLRPELLVTECV 257 (312)
T ss_dssp SEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECC
T ss_pred eEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEec
Confidence 9999998765311000011 12356667777664
No 331
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.45 E-value=0.00027 Score=59.08 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=57.3
Q ss_pred CCCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccH
Q 024016 6 IPAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~-mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~ 84 (274)
.....+++.|||.|. +|.+++..|...|. +|+++ +|+. .+..+.+++||+||.+++...+
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA----tVtv~-h~~t--------------~~L~~~~~~ADIVI~Avg~p~~ 216 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGA----TVSVC-HIKT--------------KDLSLYTRQADLIIVAAGCVNL 216 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SCHHHHHTTCSEEEECSSCTTC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC----eEEEE-eCCc--------------hhHHHHhhcCCEEEECCCCCCc
Confidence 345668999999987 69999999999998 99999 7642 3556778999999999963221
Q ss_pred HHHHHHhccccCCCCEEEEe
Q 024016 85 KDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~ 104 (274)
+. ...+++|.+||++
T Consensus 217 ---I~--~~~vk~GavVIDV 231 (285)
T 3p2o_A 217 ---LR--SDMVKEGVIVVDV 231 (285)
T ss_dssp ---BC--GGGSCTTEEEEEC
T ss_pred ---CC--HHHcCCCeEEEEe
Confidence 11 1346889888876
No 332
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.43 E-value=0.00045 Score=60.21 Aligned_cols=94 Identities=16% Similarity=0.172 Sum_probs=67.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC----HHH----H----HHHHH-cC-ceeccCchhhccCC
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN----LKR----R----DAFES-IG-VKVLSDNNAVVEYS 72 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~----~~~----~----~~l~~-~g-~~~~~~~~~~~~~a 72 (274)
..+..||.|+|+|.+|..+++.|...|. .+|+++ ||+ .++ . +.+.+ .+ .....+..++++++
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~---~~I~v~-Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~A 264 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGV---KNVVAV-DRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGA 264 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTC---CEEEEE-ETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTC
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCC---CeEEEE-ECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccC
Confidence 3456799999999999999999999986 379999 998 544 2 23333 11 11235678899999
Q ss_pred CEEEEeeCccc-HHHHHHHhccccCCCCEEEEecCCC
Q 024016 73 DVVVFSVKPQV-VKDVAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 73 DiIil~v~~~~-~~~v~~~i~~~l~~~~~vis~~~g~ 108 (274)
|++|-+..|.. -+++++.+ .++.+|+.++++.
T Consensus 265 DVlIG~Sap~l~t~emVk~M----a~~pIIfalSNPt 297 (388)
T 1vl6_A 265 DFFIGVSRGNILKPEWIKKM----SRKPVIFALANPV 297 (388)
T ss_dssp SEEEECSCSSCSCHHHHTTS----CSSCEEEECCSSS
T ss_pred CEEEEeCCCCccCHHHHHhc----CCCCEEEEcCCCC
Confidence 99998875544 45666553 4677888887765
No 333
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.40 E-value=0.00014 Score=63.37 Aligned_cols=95 Identities=7% Similarity=0.088 Sum_probs=60.0
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHH----------H-cCceeccCchhhccCCCE
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL--KRRDAFE----------S-IGVKVLSDNNAVVEYSDV 74 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~--~~~~~l~----------~-~g~~~~~~~~~~~~~aDi 74 (274)
+++||+||| .|..|.-+.+.|.++-+ .++.....++. ++....- . ....+.....+.+.++|+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~---~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDv 82 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPY---IKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDI 82 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSS---EEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCC---ceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCE
Confidence 357999999 69999999997765432 25544323332 2232210 0 122222212234578999
Q ss_pred EEEeeCcccHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 75 Iil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
||+|+|.....+....+. ..|..+|+.++...
T Consensus 83 vf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~~R 114 (359)
T 4dpl_A 83 IFSPLPQGAAGPVEEQFA---KEGFPVISNSPDHR 114 (359)
T ss_dssp EEECCCTTTHHHHHHHHH---HTTCEEEECSSTTT
T ss_pred EEECCChHHHHHHHHHHH---HCCCEEEEcCCCcc
Confidence 999999998888777654 46788999877653
No 334
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.40 E-value=0.00014 Score=63.37 Aligned_cols=95 Identities=7% Similarity=0.088 Sum_probs=59.9
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHH----------H-cCceeccCchhhccCCCE
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL--KRRDAFE----------S-IGVKVLSDNNAVVEYSDV 74 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~--~~~~~l~----------~-~g~~~~~~~~~~~~~aDi 74 (274)
+++||+||| .|..|.-+.+.|.++-+ .++.....++. ++....- . ....+.....+.+.++|+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~---~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDv 82 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPY---IKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDI 82 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSS---EEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCC---ceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCE
Confidence 357999999 69999999997765432 25544323332 2232210 0 122222212234578999
Q ss_pred EEEeeCcccHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 75 VVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 75 Iil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
||+|+|.....+....+. ..|..+|+.++...
T Consensus 83 vf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~~R 114 (359)
T 4dpk_A 83 IFSPLPQGAAGPVEEQFA---KEGFPVISNSPDHR 114 (359)
T ss_dssp EEECCCTTTHHHHHHHHH---HTTCEEEECSSTTT
T ss_pred EEECCChHHHHHHHHHHH---HCCCEEEEcCCCcc
Confidence 999999998888777654 46788999877643
No 335
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.38 E-value=0.00028 Score=58.84 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=56.9
Q ss_pred CCCCCCeEEEEcccHH-HHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcc
Q 024016 6 IPAESFILGFIGAGKM-AESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~m-G~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~ 82 (274)
.....+++.|||.|++ |..++..|... |. +|+++ +|+. .+..+.+++||+||.+++..
T Consensus 154 i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~a----tVtv~-h~~t--------------~~L~~~~~~ADIVI~Avg~p 214 (281)
T 2c2x_A 154 ISIAGAHVVVIGRGVTVGRPLGLLLTRRSENA----TVTLC-HTGT--------------RDLPALTRQADIVVAAVGVA 214 (281)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHTSTTTCC----EEEEE-CTTC--------------SCHHHHHTTCSEEEECSCCT
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHhcCCCCC----EEEEE-ECch--------------hHHHHHHhhCCEEEECCCCC
Confidence 3456789999999986 99999999988 66 89999 7654 35667788999999999633
Q ss_pred cHHHHHHHhccccCCCCEEEEe
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~ 104 (274)
.+ +. ...+++|.+||++
T Consensus 215 ~~---I~--~~~vk~GavVIDV 231 (281)
T 2c2x_A 215 HL---LT--ADMVRPGAAVIDV 231 (281)
T ss_dssp TC---BC--GGGSCTTCEEEEC
T ss_pred cc---cC--HHHcCCCcEEEEc
Confidence 21 11 1235788888876
No 336
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.35 E-value=0.0013 Score=56.79 Aligned_cols=105 Identities=14% Similarity=0.183 Sum_probs=65.8
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhCCCCC---CCcEEEEeCCCHH--HHH----HHHHc------CceeccCchhh
Q 024016 5 PIPAESFILGFIGA-GKMAESIAKGVAKSGVLP---PDRICTAVHSNLK--RRD----AFESI------GVKVLSDNNAV 68 (274)
Q Consensus 5 ~~~~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~---~~~v~v~~~r~~~--~~~----~l~~~------g~~~~~~~~~~ 68 (274)
|-.|+..||+|+|+ |.+|.+++..|.....+. +.++.++ |.++. +++ +|... .+.+.+++.+.
T Consensus 19 ~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~-Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a 97 (345)
T 4h7p_A 19 PGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLL-DIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVA 97 (345)
T ss_dssp ---CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEE-CCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHH
T ss_pred CCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEE-CCCCccccchhhhhhhhhcCccCCCcEEEcCChHHH
Confidence 33445569999996 999999999887765432 1268899 98763 222 22221 23345677788
Q ss_pred ccCCCEEEEee--C--cc------------cHHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 69 VEYSDVVVFSV--K--PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 69 ~~~aDiIil~v--~--~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
+++||+||++- | |. .++++.+.|..+-.|+..|+-+++++..
T Consensus 98 ~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~ 155 (345)
T 4h7p_A 98 FDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANT 155 (345)
T ss_dssp TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH
T ss_pred hCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcch
Confidence 99999999975 2 32 1333334455554577777767776543
No 337
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=97.33 E-value=0.00065 Score=58.09 Aligned_cols=73 Identities=12% Similarity=0.142 Sum_probs=54.4
Q ss_pred CCCCCCCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-------cCceec--cC------c
Q 024016 2 DAFPIPAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-------IGVKVL--SD------N 65 (274)
Q Consensus 2 ~~~~~~~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-------~g~~~~--~~------~ 65 (274)
.+||..++.++|.|.|+ |.+|+++++.|++.|+ +|++. +|++++.+.+.+ .++... .| .
T Consensus 3 ~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~ 77 (342)
T 1y1p_A 3 IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGY----KVRGT-ARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAY 77 (342)
T ss_dssp STTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTT
T ss_pred CCcccCCCCCEEEEECCccHHHHHHHHHHHHCCC----EEEEE-eCCcccHHHHHHHhhccCCCceEEEEecCCcChHHH
Confidence 45777777889999987 9999999999999999 99999 999877655432 123321 12 2
Q ss_pred hhhccCCCEEEEee
Q 024016 66 NAVVEYSDVVVFSV 79 (274)
Q Consensus 66 ~~~~~~aDiIil~v 79 (274)
.++++++|+||-+.
T Consensus 78 ~~~~~~~d~vih~A 91 (342)
T 1y1p_A 78 DEVIKGAAGVAHIA 91 (342)
T ss_dssp TTTTTTCSEEEECC
T ss_pred HHHHcCCCEEEEeC
Confidence 34456789999876
No 338
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=97.32 E-value=0.00027 Score=61.95 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=59.4
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEE-EEe-CCCHH-HHHHHHH-----------cCceecc-CchhhccC
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRIC-TAV-HSNLK-RRDAFES-----------IGVKVLS-DNNAVVEY 71 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~-v~~-~r~~~-~~~~l~~-----------~g~~~~~-~~~~~~~~ 71 (274)
|+++|||||| .|..|.-|.+.|.+.-+ .++. ++. .|+.- +...... ....+.+ +..+..++
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~---~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~~ 93 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPE---FEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFLE 93 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSS---EEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGGG
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCC---ceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhccc
Confidence 4567899999 69999999997766443 2553 321 22221 2221110 1122211 22214678
Q ss_pred CCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 72 SDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 72 aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+|+||+|+|.....++...+. ..|..||+.++...
T Consensus 94 ~Dvvf~alp~~~s~~~~~~~~---~~G~~VIDlSa~fR 128 (381)
T 3hsk_A 94 CDVVFSGLDADVAGDIEKSFV---EAGLAVVSNAKNYR 128 (381)
T ss_dssp CSEEEECCCHHHHHHHHHHHH---HTTCEEEECCSTTT
T ss_pred CCEEEECCChhHHHHHHHHHH---hCCCEEEEcCCccc
Confidence 999999999988888877664 46788999877653
No 339
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.31 E-value=0.00017 Score=57.09 Aligned_cols=66 Identities=14% Similarity=0.143 Sum_probs=47.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec----cC---chhhccCCCEEEEeeC
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL----SD---NNAVVEYSDVVVFSVK 80 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~----~~---~~~~~~~aDiIil~v~ 80 (274)
.|+|.|+|+ |.+|+.+++.|++.|+ +|++. +|++++.+.+...++... .+ ..++++++|+||.+..
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY----EVTVL-VRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC----eEEEE-EeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 379999987 9999999999999999 99999 998876543212233221 12 2345667898888764
No 340
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.30 E-value=0.00053 Score=57.83 Aligned_cols=91 Identities=19% Similarity=0.267 Sum_probs=60.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cC----------ceeccCchhhccCCCEEE
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IG----------VKVLSDNNAVVEYSDVVV 76 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g----------~~~~~~~~~~~~~aDiIi 76 (274)
.+.+++.|+|+|.+|.+++..|.+.| +|+++ +|++++++.+.+ .+ +.+ .+..+...++|+||
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G-----~V~v~-~r~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~~~~~~DilV 198 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN-----NIIIA-NRTVEKAEALAKEIAEKLNKKFGEEVKF-SGLDVDLDGVDIII 198 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-----EEEEE-CSSHHHHHHHHHHHHHHHTCCHHHHEEE-ECTTCCCTTCCEEE
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC-----CEEEE-ECCHHHHHHHHHHHhhhcccccceeEEE-eeHHHhhCCCCEEE
Confidence 34578999999999999999999887 79999 999988877754 11 122 22245567899999
Q ss_pred EeeCcccHHHHH-HHh--ccccCCCCEEEEec
Q 024016 77 FSVKPQVVKDVA-MQI--RPLLSRKKLLVSVA 105 (274)
Q Consensus 77 l~v~~~~~~~v~-~~i--~~~l~~~~~vis~~ 105 (274)
.+++.......- ..+ ...++++.+++++.
T Consensus 199 n~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~ 230 (287)
T 1nvt_A 199 NATPIGMYPNIDVEPIVKAEKLREDMVVMDLI 230 (287)
T ss_dssp ECSCTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred ECCCCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 998754321100 001 12355666777664
No 341
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.29 E-value=0.00056 Score=57.58 Aligned_cols=76 Identities=12% Similarity=0.198 Sum_probs=58.0
Q ss_pred CCCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccH
Q 024016 6 IPAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~-mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~ 84 (274)
.....+++.|||.|+ +|..++..|...|. +|+++ +++. .+..+.+++||+||.+++...+
T Consensus 161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~-hs~t--------------~~L~~~~~~ADIVI~Avg~p~~ 221 (301)
T 1a4i_A 161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNA----TVTTC-HSKT--------------AHLDEEVNKGDILVVATGQPEM 221 (301)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SSHHHHHTTCSEEEECCCCTTC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHhCCC----eEEEE-ECCc--------------ccHHHHhccCCEEEECCCCccc
Confidence 344568999999996 69999999999997 99999 7542 3566788999999999964321
Q ss_pred HHHHHHhccccCCCCEEEEec
Q 024016 85 KDVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~ 105 (274)
+. ...+++|.+||++.
T Consensus 222 ---I~--~~~vk~GavVIDVg 237 (301)
T 1a4i_A 222 ---VK--GEWIKPGAIVIDCG 237 (301)
T ss_dssp ---BC--GGGSCTTCEEEECC
T ss_pred ---CC--HHHcCCCcEEEEcc
Confidence 11 12367899999873
No 342
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.28 E-value=0.0005 Score=57.46 Aligned_cols=74 Identities=15% Similarity=0.183 Sum_probs=56.4
Q ss_pred CCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHH
Q 024016 7 PAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVK 85 (274)
Q Consensus 7 ~~~~~~IgiIG~G~-mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~ 85 (274)
+...+++.|||.|. +|.+++..|...|. +|+++ ++.. .+..+.+++||+||.+++...+
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gA----tVtv~-hs~T--------------~~L~~~~~~ADIVI~Avg~p~~- 217 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGC----TVTVT-HRFT--------------RDLADHVSRADLVVVAAGKPGL- 217 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTC----EEEEE-CTTC--------------SCHHHHHHTCSEEEECCCCTTC-
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC----eEEEE-eCCC--------------cCHHHHhccCCEEEECCCCCCC-
Confidence 44568999999876 89999999999998 99999 7632 2456778899999999963221
Q ss_pred HHHHHhccccCCCCEEEEe
Q 024016 86 DVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~ 104 (274)
+. ...+++|.+||++
T Consensus 218 --I~--~~~vk~GavVIDv 232 (286)
T 4a5o_A 218 --VK--GEWIKEGAIVIDV 232 (286)
T ss_dssp --BC--GGGSCTTCEEEEC
T ss_pred --CC--HHHcCCCeEEEEe
Confidence 11 1346899998886
No 343
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=97.27 E-value=0.00016 Score=63.01 Aligned_cols=95 Identities=15% Similarity=0.226 Sum_probs=58.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
++||+||| .|..|.-|.+.|.+.+| +..++.....++. .+.-.+......+..-..+..+++|+||+|+|.....+.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~-p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~ 80 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTL-PIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKY 80 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCC-CEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCC-CcEEEEEEEccccCCCcceecCCCceEeeCCHHHhcCCCEEEECCChHhHHHH
Confidence 46999999 79999999998888765 3234444412221 111001111122211112345789999999998887777
Q ss_pred HHHhccccCCCCEEEEecCCC
Q 024016 88 AMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~~~g~ 108 (274)
...+. ..|..+|+.++..
T Consensus 81 a~~~~---~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 81 APYAV---KAGVVVVDNTSYF 98 (366)
T ss_dssp HHHHH---HTTCEEEECSSTT
T ss_pred HHHHH---HCCCEEEEcCCcc
Confidence 76654 4677899987754
No 344
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=97.27 E-value=0.00014 Score=60.94 Aligned_cols=63 Identities=14% Similarity=0.278 Sum_probs=46.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-------ccCchhhccC-CCEEEEee
Q 024016 8 AESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-------LSDNNAVVEY-SDVVVFSV 79 (274)
Q Consensus 8 ~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-------~~~~~~~~~~-aDiIil~v 79 (274)
|++|||.|.|+|.+|+.+++.|++.|+ +|++. +|++++.. .++.. ..+..++++. +|+||-+.
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a 71 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGH----EVTGL-RRSAQPMP----AGVQTLIADVTRPDTLASIVHLRPEILVYCV 71 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ECTTSCCC----TTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCccccc----cCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence 456799999999999999999999999 99999 88876531 22221 1122344555 99999876
No 345
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.26 E-value=0.00063 Score=56.22 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=51.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHHHHH------cCcee--c
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDAFES------IGVKV--L 62 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-------------------~~~~~l~~------~g~~~--~ 62 (274)
..+|.|||+|.+|+.++.+|...|. .+++++ |++. .|++.+++ .++.+ .
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gv---g~i~lv-D~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGV---GTLVLA-DDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC---SEEEEE-CCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCC---CeEEEE-eCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 4699999999999999999999997 378888 6643 33433332 23322 1
Q ss_pred c------CchhhccCCCEEEEeeCcccHHHHHHHh
Q 024016 63 S------DNNAVVEYSDVVVFSVKPQVVKDVAMQI 91 (274)
Q Consensus 63 ~------~~~~~~~~aDiIil~v~~~~~~~v~~~i 91 (274)
. +..+.++++|+||.|++....+..+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~ 138 (251)
T 1zud_1 104 QQRLTGEALKDAVARADVVLDCTDNMATRQEINAA 138 (251)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHH
T ss_pred eccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHH
Confidence 1 1234456788888888655555555443
No 346
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=97.26 E-value=0.0015 Score=56.58 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=56.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeC-C-CHHHHHHHHH----cC-------------------cee
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVH-S-NLKRRDAFES----IG-------------------VKV 61 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~-r-~~~~~~~l~~----~g-------------------~~~ 61 (274)
.+.++||||+|.|.+|.-+.+.|.+... -+|...++ + +.+....+.+ .| +.+
T Consensus 14 ~~~~ikVgI~G~G~iGr~llR~l~~~p~---veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v 90 (354)
T 3cps_A 14 LYFQGTLGINGFGRIGRLVLRACMERND---ITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKV 90 (354)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHTCSS---CEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEE
T ss_pred cCcceEEEEECCCHHHHHHHHHHHcCCC---eEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEE
Confidence 3456799999999999999999887632 27766635 3 3333323322 11 112
Q ss_pred c--cCchhhc---cCCCEEEEeeCcccHHHHHHHhccccCCCC--EEEEecC
Q 024016 62 L--SDNNAVV---EYSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVAA 106 (274)
Q Consensus 62 ~--~~~~~~~---~~aDiIil~v~~~~~~~v~~~i~~~l~~~~--~vis~~~ 106 (274)
. .++.++- .++|+||.|++...-.+..... +..|. +|||..+
T Consensus 91 ~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~---l~~GakkvVId~pa 139 (354)
T 3cps_A 91 FQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLH---LKGGAKKVIISAPP 139 (354)
T ss_dssp ECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGG---GTTTCSEEEESSCC
T ss_pred EecCChHHCCcccCCCCEEEECCCchhhHHHHHHH---HHcCCcEEEEeCCC
Confidence 2 1344431 4799999999988776666544 44555 7887643
No 347
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.23 E-value=0.0012 Score=56.87 Aligned_cols=99 Identities=11% Similarity=0.085 Sum_probs=62.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCC---CcEEEEeCCCH--HHH----HHHHHc------CceeccCchhhccCCC
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPP---DRICTAVHSNL--KRR----DAFESI------GVKVLSDNNAVVEYSD 73 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~---~~v~v~~~r~~--~~~----~~l~~~------g~~~~~~~~~~~~~aD 73 (274)
.+||.|+| +|.+|++++..|...|.+.. -.+.++ |+++ +++ .+|... ++...++..+.+++||
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~-Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daD 81 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLL-DITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD 81 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEE-CCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEE-eCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCC
Confidence 36999999 79999999999998876331 128888 9864 222 223321 1234455567789999
Q ss_pred EEEEee--C--cc------------cHHHHHHHhccccCCCCEEEEecCCCC
Q 024016 74 VVVFSV--K--PQ------------VVKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 74 iIil~v--~--~~------------~~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+||++- | |. .++++++.+..+-.++..++..++++.
T Consensus 82 vVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd 133 (333)
T 5mdh_A 82 VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPAN 133 (333)
T ss_dssp EEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchH
Confidence 999975 2 11 134455555555433434666666654
No 348
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.23 E-value=0.00098 Score=58.13 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=62.0
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCC-CcEEEE-eCCCH--HHHH----HHHH--c----CceeccCchhhccCCCE
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPP-DRICTA-VHSNL--KRRD----AFES--I----GVKVLSDNNAVVEYSDV 74 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~-~~v~v~-~~r~~--~~~~----~l~~--~----g~~~~~~~~~~~~~aDi 74 (274)
.+||+||| +|.+|.+++..|...+.+.. .++.++ .+..+ ++++ +|.. . .+.+.++..+.+++||+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daDv 111 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW 111 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCCE
Confidence 46999999 79999999999998887542 226554 04322 2222 2222 1 23445566788999999
Q ss_pred EEEee--C--ccc------------HHHHHHHhccccCCCCEEEEecCCCCH
Q 024016 75 VVFSV--K--PQV------------VKDVAMQIRPLLSRKKLLVSVAAGVKL 110 (274)
Q Consensus 75 Iil~v--~--~~~------------~~~v~~~i~~~l~~~~~vis~~~g~~~ 110 (274)
||++- | |.. ++++...+..+..|+.+++-+++++..
T Consensus 112 VVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~ 163 (375)
T 7mdh_A 112 ALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNT 163 (375)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhH
Confidence 99974 2 211 223333444443577788877776543
No 349
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.20 E-value=0.0004 Score=58.13 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=57.1
Q ss_pred CCCCCCeEEEEcccH-HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccH
Q 024016 6 IPAESFILGFIGAGK-MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVV 84 (274)
Q Consensus 6 ~~~~~~~IgiIG~G~-mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~ 84 (274)
.....+++.|||.|+ +|..++..|...|. +|+++ +++. .+..+.+++||+||.+++...+
T Consensus 155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA----tVtv~-hs~t--------------~~L~~~~~~ADIVI~Avg~p~l 215 (288)
T 1b0a_A 155 IDTFGLNAVVIGASNIVGRPMSMELLLAGC----TTTVT-HRFT--------------KNLRHHVENADLLIVAVGKPGF 215 (288)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHTTTC----EEEEE-CSSC--------------SCHHHHHHHCSEEEECSCCTTC
T ss_pred CCCCCCEEEEECCChHHHHHHHHHHHHCCC----eEEEE-eCCc--------------hhHHHHhccCCEEEECCCCcCc
Confidence 345668999999997 59999999999987 99999 7553 3556778899999999973321
Q ss_pred HHHHHHhccccCCCCEEEEe
Q 024016 85 KDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~ 104 (274)
+. ...+++|.+||++
T Consensus 216 ---I~--~~~vk~GavVIDV 230 (288)
T 1b0a_A 216 ---IP--GDWIKEGAIVIDV 230 (288)
T ss_dssp ---BC--TTTSCTTCEEEEC
T ss_pred ---CC--HHHcCCCcEEEEc
Confidence 11 1235789998886
No 350
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.20 E-value=0.00018 Score=58.02 Aligned_cols=67 Identities=15% Similarity=0.212 Sum_probs=49.6
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-------cCchhhccCCCEEEEeeC
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-------SDNNAVVEYSDVVVFSVK 80 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-------~~~~~~~~~aDiIil~v~ 80 (274)
++|||.|.| +|.+|+.+++.|++.|+ +|++. +|++++.+.+. .++... .+..++++++|+||-+..
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~ 76 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGF----EVTAV-VRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFN 76 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTC----EEEEE-CSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC----EEEEE-EcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence 357999998 59999999999999999 99999 99987654332 233221 123356778999999874
Q ss_pred c
Q 024016 81 P 81 (274)
Q Consensus 81 ~ 81 (274)
+
T Consensus 77 ~ 77 (227)
T 3dhn_A 77 P 77 (227)
T ss_dssp C
T ss_pred C
Confidence 3
No 351
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.20 E-value=0.0015 Score=56.25 Aligned_cols=88 Identities=10% Similarity=0.043 Sum_probs=59.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cC---c---hhh-ccCCCEEEEeeCc
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD---N---NAV-VEYSDVVVFSVKP 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~---~---~~~-~~~aDiIil~v~~ 81 (274)
.++|.|+|+|.+|..+++.|.+.| .|++. ++++++.+ +.+.+..+. .| . .++ ++++|.+++++++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g-----~v~vi-d~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~ 187 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE-----VFVLA-EDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLES 187 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC-----EEEEE-SCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC-----cEEEE-eCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc
Confidence 358999999999999999998876 37788 99999998 777666432 12 1 122 6689999999987
Q ss_pred ccHHHHHHHhccccCCCCEEEEe
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
+...-..-.....+.++..++.-
T Consensus 188 d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 188 DSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp HHHHHHHHHHHHTTCTTSEEEEE
T ss_pred cHHHHHHHHHHHHHCCCCeEEEE
Confidence 64333322333334565444543
No 352
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=97.18 E-value=0.00075 Score=56.93 Aligned_cols=77 Identities=21% Similarity=0.249 Sum_probs=53.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCC------HHHHHHHH---HcCceec----cC---chhhccCC
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSN------LKRRDAFE---SIGVKVL----SD---NNAVVEYS 72 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~------~~~~~~l~---~~g~~~~----~~---~~~~~~~a 72 (274)
+++|.|+|+ |.+|+++++.|++.|+ +|++. .|+ +++.+.+. ..|+.+. .+ ..++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~l-~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH----PTFLL-VRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC----CEEEE-CCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC----CEEEE-ECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCC
Confidence 578999986 9999999999999998 99999 887 34443332 3465432 12 23456789
Q ss_pred CEEEEeeCcc---cHHHHHHHh
Q 024016 73 DVVVFSVKPQ---VVKDVAMQI 91 (274)
Q Consensus 73 DiIil~v~~~---~~~~v~~~i 91 (274)
|+||.+.... ....+++..
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa 100 (308)
T 1qyc_A 79 DVVISTVGSLQIESQVNIIKAI 100 (308)
T ss_dssp SEEEECCCGGGSGGGHHHHHHH
T ss_pred CEEEECCcchhhhhHHHHHHHH
Confidence 9999998643 234444443
No 353
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=97.14 E-value=0.0013 Score=56.51 Aligned_cols=89 Identities=11% Similarity=0.211 Sum_probs=58.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHHHH----H--cCcee--c
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDAFE----S--IGVKV--L 62 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-------------------~~~~~l~----~--~g~~~--~ 62 (274)
..||.|||+|..|+.++++|...|. .+++++ |++. .|++.++ + .++.+ .
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV---g~Itlv-D~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~ 109 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV---RKITFV-DNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 109 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEE-CCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CEEEEe-cCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence 4799999999999999999999997 378888 7643 2333333 2 23332 1
Q ss_pred c---------------------CchhhccCCCEEEEeeCcccHHHHHHHhccccCCCCEEEEe
Q 024016 63 S---------------------DNNAVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 63 ~---------------------~~~~~~~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
. +..+.++++|+||.|+.....+..+..+... .++.+|+.
T Consensus 110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~--~~~plI~a 170 (340)
T 3rui_A 110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNI--ENKTVINA 170 (340)
T ss_dssp CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHH--TTCEEEEE
T ss_pred eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHH--cCCcEEEe
Confidence 1 1234567899999999766566555554422 34456653
No 354
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=97.14 E-value=0.00078 Score=56.39 Aligned_cols=65 Identities=15% Similarity=0.076 Sum_probs=50.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHcCceec----cC---chhhccCCCEEEEeeC
Q 024016 11 FILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESIGVKVL----SD---NNAVVEYSDVVVFSVK 80 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~----~~---~~~~~~~aDiIil~v~ 80 (274)
|||.|.| +|.+|+.+++.|.+. |+ +|++. .|++++.+.+...++.+. .+ ..++++++|+||.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~----~V~~~-~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHID----HFHIG-VRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCT----TEEEE-ESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCC----cEEEE-ECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 5899998 599999999999987 88 99999 999887766555555432 12 2446778999999874
No 355
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=97.11 E-value=0.0011 Score=56.14 Aligned_cols=66 Identities=15% Similarity=0.250 Sum_probs=49.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCC-----HHHHHHHH---HcCceec----cC---chhhccCCC
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSN-----LKRRDAFE---SIGVKVL----SD---NNAVVEYSD 73 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~-----~~~~~~l~---~~g~~~~----~~---~~~~~~~aD 73 (274)
+|+|.|+|+ |.+|+++++.|++.|+ +|++. +|+ +++.+.+. ..++.+. .+ ..++++++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH----PTYVL-FRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC----CEEEE-CCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC----cEEEE-ECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCC
Confidence 578999985 9999999999999998 99999 898 45554432 3455432 12 345677899
Q ss_pred EEEEeeC
Q 024016 74 VVVFSVK 80 (274)
Q Consensus 74 iIil~v~ 80 (274)
+||.+..
T Consensus 79 ~vi~~a~ 85 (313)
T 1qyd_A 79 VVISALA 85 (313)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9999874
No 356
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=97.09 E-value=0.00082 Score=57.11 Aligned_cols=78 Identities=17% Similarity=0.223 Sum_probs=54.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH-HHHH---HHHcCceec----cC---chhhccCCCEEEE
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLK-RRDA---FESIGVKVL----SD---NNAVVEYSDVVVF 77 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~-~~~~---l~~~g~~~~----~~---~~~~~~~aDiIil 77 (274)
+++|.|+|+ |.+|+++++.|++.|+ +|++. +|+++ +.+. +...|+.+. .+ ..++++++|+||.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~l-~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGH----PTYVF-TRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC----CEEEE-ECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCC----cEEEE-ECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 358999985 9999999999999999 99999 88764 3332 334565432 12 3356778999999
Q ss_pred eeCcc---cHHHHHHHhc
Q 024016 78 SVKPQ---VVKDVAMQIR 92 (274)
Q Consensus 78 ~v~~~---~~~~v~~~i~ 92 (274)
+.... ....+++...
T Consensus 86 ~a~~~~~~~~~~l~~aa~ 103 (318)
T 2r6j_A 86 ALAFPQILDQFKILEAIK 103 (318)
T ss_dssp CCCGGGSTTHHHHHHHHH
T ss_pred CCchhhhHHHHHHHHHHH
Confidence 88642 3445554433
No 357
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.08 E-value=0.0011 Score=59.59 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=51.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH----HHHHHHHHcCceec--cCchhhccC-CCEEEEee
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL----KRRDAFESIGVKVL--SDNNAVVEY-SDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~----~~~~~l~~~g~~~~--~~~~~~~~~-aDiIil~v 79 (274)
+.+||.|||.|..|.+.|+.|.+.|+ +|+++ |+++ ...+.|.+.|+.+. .++.+...+ +|+|+++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~----~V~~~-D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~sp 80 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGA----IVTVN-DGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNP 80 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTC----EEEEE-ESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC----EEEEE-eCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECC
Confidence 45799999999999999999999999 99999 8754 23566777888764 233445566 89999874
No 358
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.05 E-value=0.0019 Score=55.13 Aligned_cols=66 Identities=18% Similarity=0.341 Sum_probs=47.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHH----HHH----c--Cceecc---CchhhccCCCE
Q 024016 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDA----FES----I--GVKVLS---DNNAVVEYSDV 74 (274)
Q Consensus 11 ~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r--~~~~~~~----l~~----~--g~~~~~---~~~~~~~~aDi 74 (274)
|||.|+|+ |.+|++++..|+..|+. .++.++ |+ ++++++. +.. . .+.+.. +..++++++|+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~--~el~L~-Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~ 77 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFM--KDLVLI-GREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDV 77 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTC--CEEEEE-ECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCC--CEEEEE-cCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCE
Confidence 58999999 99999999999988752 368888 98 7654432 222 1 223332 13678999999
Q ss_pred EEEee
Q 024016 75 VVFSV 79 (274)
Q Consensus 75 Iil~v 79 (274)
||++-
T Consensus 78 Vi~~A 82 (313)
T 1hye_A 78 VIITS 82 (313)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99986
No 359
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=97.01 E-value=0.00026 Score=61.66 Aligned_cols=90 Identities=10% Similarity=0.062 Sum_probs=50.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc--CceeccCchhhcc----------------
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI--GVKVLSDNNAVVE---------------- 70 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~--g~~~~~~~~~~~~---------------- 70 (274)
+++||||||+|.||+.+++.|.+..+-...+|...+++++.. +.+. |+..+++..++++
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~---~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~ 79 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSL---ISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHL 79 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEE---ECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHH
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhh---hccccCCCCccccHHHHHhcccCCCCCHHHHHHHh
Confidence 457999999999999999999886300001443332654321 1111 4333233333322
Q ss_pred ----CCCEEEEeeCcccHHHHHHHhccccCCCCEEEEe
Q 024016 71 ----YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 71 ----~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
..|+|+.|+|.......+ ...+..|+-||+.
T Consensus 80 ~~~~~~DvVV~~t~~~~~a~~~---~~AL~aGkhVVta 114 (358)
T 1ebf_A 80 KTSPKPVILVDNTSSAYIAGFY---TKFVENGISIATP 114 (358)
T ss_dssp TTCSSCEEEEECSCCHHHHTTH---HHHHHTTCEEECC
T ss_pred hhccCCcEEEEcCCChHHHHHH---HHHHHCCCeEEec
Confidence 237899999865432222 2335567777753
No 360
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.99 E-value=0.00029 Score=56.58 Aligned_cols=63 Identities=13% Similarity=0.221 Sum_probs=47.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-----cc---CchhhccCCCEEEEeeC
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-----LS---DNNAVVEYSDVVVFSVK 80 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-----~~---~~~~~~~~aDiIil~v~ 80 (274)
|||.|.| +|.+|+.+++.|++.|+ +|++. +|++++.+.+ .++.. .+ +..++++++|+||-+..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag 72 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY----QIYAG-ARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG 72 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC----EEEEE-ESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence 5899998 79999999999999999 99999 9998765433 22221 11 22345678999998874
No 361
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.99 E-value=0.0007 Score=58.00 Aligned_cols=66 Identities=17% Similarity=0.235 Sum_probs=48.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec----cC---chhhccCCCEEEEee
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL----SD---NNAVVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~----~~---~~~~~~~aDiIil~v 79 (274)
++|||.|.|+ |.+|+++++.|++.|+ +|++. +|++.+.+.+...++... .+ ..++++++|+||-+.
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a 85 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGH----DLVLI-HRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSA 85 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-ecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 3469999985 9999999999999999 99999 898776655543344321 12 234567899999876
No 362
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=96.94 E-value=0.0037 Score=53.69 Aligned_cols=92 Identities=14% Similarity=0.086 Sum_probs=58.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHHc--------C--------ce-------ec--cC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFESI--------G--------VK-------VL--SD 64 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r-~~~~~~~l~~~--------g--------~~-------~~--~~ 64 (274)
+||||+|.|.+|.-+.+.|.++.. -+|...+++ +++....+.+. + +. +. .+
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~---veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSD---IEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSS---EEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCC---eEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCC
Confidence 589999999999999999887643 256555355 34444444331 1 10 11 12
Q ss_pred chhhc---cCCCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCCC
Q 024016 65 NNAVV---EYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 65 ~~~~~---~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~ 108 (274)
+.++- .++|+||.|+|...-.+...... ..|..+|++++..
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l---~~GakvVdlSa~~ 122 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHI---TAGAKKVVMTGPS 122 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHH---HTTCSEEEESSCC
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHH---HCCCEEEEECCCC
Confidence 33321 47999999999887666665443 3566667776654
No 363
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.90 E-value=0.0015 Score=54.94 Aligned_cols=66 Identities=14% Similarity=0.280 Sum_probs=49.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHH--HHHHHcCceec----cC---chhhccCCCEEEEe
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRR--DAFESIGVKVL----SD---NNAVVEYSDVVVFS 78 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g-~~~~~~v~v~~~r~~~~~--~~l~~~g~~~~----~~---~~~~~~~aDiIil~ 78 (274)
+++|.|.|+ |.+|+++++.|++.| + +|++. +|++++. +.+...++.+. .+ ..++++++|+||.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~----~V~~~-~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF----KVRVV-TRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS----EEEEE-ESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc----eEEEE-EcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 478999987 999999999999988 8 99999 8887653 34444565432 12 23456789999998
Q ss_pred eC
Q 024016 79 VK 80 (274)
Q Consensus 79 v~ 80 (274)
..
T Consensus 80 a~ 81 (299)
T 2wm3_A 80 TN 81 (299)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 364
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.88 E-value=0.0014 Score=55.20 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=53.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------HHHHHH---HHcCceec----cC---chhhccC
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNL-------KRRDAF---ESIGVKVL----SD---NNAVVEY 71 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-------~~~~~l---~~~g~~~~----~~---~~~~~~~ 71 (274)
+++|.|.|+ |.+|+++++.|++.|+ +|++. +|++ ++.+.+ ...++.+. .+ ..+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN----PTYAL-VRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC----CEEEE-ECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC----cEEEE-ECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC
Confidence 468999986 9999999999999999 99998 8876 555433 23465432 12 2345678
Q ss_pred CCEEEEeeCcc---cHHHHHHHh
Q 024016 72 SDVVVFSVKPQ---VVKDVAMQI 91 (274)
Q Consensus 72 aDiIil~v~~~---~~~~v~~~i 91 (274)
+|+||.+.... ....+++..
T Consensus 77 ~d~vi~~a~~~~~~~~~~l~~aa 99 (307)
T 2gas_A 77 VDIVICAAGRLLIEDQVKIIKAI 99 (307)
T ss_dssp CSEEEECSSSSCGGGHHHHHHHH
T ss_pred CCEEEECCcccccccHHHHHHHH
Confidence 99999988542 334444433
No 365
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.88 E-value=0.0012 Score=57.06 Aligned_cols=101 Identities=15% Similarity=0.242 Sum_probs=64.8
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHHH---cCceecc-CchhhccCCCEEEEeeCcc
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL--KRRDAFES---IGVKVLS-DNNAVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~--~~~~~l~~---~g~~~~~-~~~~~~~~aDiIil~v~~~ 82 (274)
+.||+||| .|..|.-|.+.|.+... .++....+++. ++....-. ....+.. +..+...++|++|+|+|..
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~---~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~ 89 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPE---AKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAG 89 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTT---EEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTT
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCC---cEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcH
Confidence 46899996 59999999999987643 35655523321 12221110 1222221 3334447899999999999
Q ss_pred cHHHHHHHhccccCCCCEEEEecCCCCH---HHHHHhhC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAAGVKL---KDLQEWTG 118 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~g~~~---~~l~~~~~ 118 (274)
...++...+ .|..||+.++.... +..++|++
T Consensus 90 ~s~~~~~~~-----~g~~VIDlSsdfRl~~~~~y~~~y~ 123 (351)
T 1vkn_A 90 ASYDLVREL-----KGVKIIDLGADFRFDDPGVYREWYG 123 (351)
T ss_dssp HHHHHHTTC-----CSCEEEESSSTTTCSSHHHHHHHHC
T ss_pred HHHHHHHHh-----CCCEEEECChhhhCCchhhhhhhcC
Confidence 888877654 67899999876543 44566664
No 366
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.87 E-value=0.0032 Score=58.08 Aligned_cols=89 Identities=11% Similarity=0.200 Sum_probs=58.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHHHH----H--cCceec--
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDAFE----S--IGVKVL-- 62 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-------------------~~~~~l~----~--~g~~~~-- 62 (274)
..||.|||+|.+|+.++.+|...|. .+++++ |.+. .|++.++ + .++.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGV---G~ItLv-D~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~ 401 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGV---RKITFV-DNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 401 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEE-CCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---CEEEEE-cCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence 4699999999999999999999997 378888 7753 2333333 2 233321
Q ss_pred c---------------------CchhhccCCCEEEEeeCcccHHHHHHHhccccCCCCEEEEe
Q 024016 63 S---------------------DNNAVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 63 ~---------------------~~~~~~~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
. +..+.++++|+||.|+.....+..+..+... .++.+|+.
T Consensus 402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~--~~~PlI~a 462 (615)
T 4gsl_A 402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNI--ENKTVINA 462 (615)
T ss_dssp CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHH--TTCEEEEE
T ss_pred eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHH--cCCeEEEE
Confidence 1 1234567899999999766666666554422 34556653
No 367
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=96.86 E-value=0.00078 Score=58.20 Aligned_cols=93 Identities=13% Similarity=0.216 Sum_probs=58.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH--HHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHH
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLK--RRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDV 87 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~--~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v 87 (274)
+||+||| .|..|.-|.+.|.++.| +..++.....++.. +.. +......+.....+..+++|+||+|+|.....+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~f-p~~el~~~~s~~~aG~~~~-~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~ 79 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDF-PASAVRFFASARSQGRKLA-FRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQ 79 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEEEECTTTSSCEEE-ETTEEEEEEETTTSCCTTCSEEEECSCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CceEEEEEECcccCCCcee-ecCCceEEEeCCHHHhccCCEEEECCChHHHHHH
Confidence 5899999 79999999998887754 22245544122211 111 1111122211112345789999999998887777
Q ss_pred HHHhccccCCCCEEEEecCCC
Q 024016 88 AMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~~~g~ 108 (274)
...+. ..|..+|+.++..
T Consensus 80 a~~~~---~~G~~vID~Sa~~ 97 (344)
T 3tz6_A 80 APRFA---AAGVTVIDNSSAW 97 (344)
T ss_dssp HHHHH---HTTCEEEECSSTT
T ss_pred HHHHH---hCCCEEEECCCcc
Confidence 76654 4678899987654
No 368
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=96.85 E-value=0.0031 Score=54.36 Aligned_cols=91 Identities=12% Similarity=0.128 Sum_probs=55.7
Q ss_pred CeEEEEcccHHHHHHHHHHHh---C-CCCCCCcEEEEeCC-CHHHHHHHHH----c-----------------C--ceec
Q 024016 11 FILGFIGAGKMAESIAKGVAK---S-GVLPPDRICTAVHS-NLKRRDAFES----I-----------------G--VKVL 62 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~---~-g~~~~~~v~v~~~r-~~~~~~~l~~----~-----------------g--~~~~ 62 (274)
+||||+|.|++|..+.+.|.+ + .+ +|...+++ +++....+.+ . | +.+.
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~----eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~ 78 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEI----TVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVL 78 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTE----EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCE----EEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEE
Confidence 599999999999999999987 4 33 66555354 4455444442 1 1 1111
Q ss_pred --cCchhh-cc--CCCEEEEeeCcccHHHHHHHhccccCCCCEEEEecC
Q 024016 63 --SDNNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 63 --~~~~~~-~~--~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++.+. .. ++|+||.|++.....+........ ...++|||..+
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~-GakkVVId~~a 126 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAA-GAKKVLFSHPG 126 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHT-TCSEEEESSCC
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHc-CCCEEEEeccc
Confidence 233332 12 799999999987766666554332 12235676543
No 369
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.84 E-value=0.0021 Score=59.44 Aligned_cols=90 Identities=13% Similarity=0.066 Sum_probs=61.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceecc---Cc----hhhccCCCEEEEeeCccc
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLS---DN----NAVVEYSDVVVFSVKPQV 83 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~---~~----~~~~~~aDiIil~v~~~~ 83 (274)
++|.|+|+|.+|..+++.|.+.|+ +|.+. ++++++.+.+. ..+.. +. ..-++++|.++++++++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~----~v~vi-d~d~~~~~~~~---~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~ 420 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV----PFILI-DRQESPVCNDH---VVVYGDATVGQTLRQAGIDRASGIIVTTNDDS 420 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC----CEEEE-ESSCCSSCCSS---CEEESCSSSSTHHHHHTTTSCSEEEECCSCHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC----CEEEE-ECChHHHhhcC---CEEEeCCCCHHHHHhcCccccCEEEEECCCch
Confidence 689999999999999999999999 99999 99998776543 11111 11 112578999999998775
Q ss_pred HHHHHHHhccccCCCCEEEEecCCC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~g~ 108 (274)
..-++..+...+.+...+|.-....
T Consensus 421 ~ni~~~~~ak~l~~~~~iiar~~~~ 445 (565)
T 4gx0_A 421 TNIFLTLACRHLHSHIRIVARANGE 445 (565)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEESST
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCH
Confidence 4333333344455664455444433
No 370
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.83 E-value=0.0019 Score=57.90 Aligned_cols=91 Identities=11% Similarity=0.124 Sum_probs=54.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-----cC-----chhhccCCCEEEEeeC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-----SD-----NNAVVEYSDVVVFSVK 80 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-----~~-----~~~~~~~aDiIil~v~ 80 (274)
+||.|||+|.||+.++..|.++.-+...+|++. ++.....+.....|++.. .+ ...++++.|+||-+.+
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s~ 92 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVSI 92 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECCc
Confidence 689999999999999999988753233478888 876554332222343221 12 1234444577776666
Q ss_pred cccHHHHHHHhccccCCCCEEEEec
Q 024016 81 PQVVKDVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 81 ~~~~~~v~~~i~~~l~~~~~vis~~ 105 (274)
+....++++... ..|..+++++
T Consensus 93 ~~~~l~Im~acl---eaGv~YlDTa 114 (480)
T 2ph5_A 93 GISSLALIILCN---QKGALYINAA 114 (480)
T ss_dssp SSCHHHHHHHHH---HHTCEEEESS
T ss_pred cccCHHHHHHHH---HcCCCEEECC
Confidence 665555544322 2445566654
No 371
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=96.83 E-value=0.0037 Score=53.86 Aligned_cols=93 Identities=13% Similarity=0.118 Sum_probs=55.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----c-----------------C--cee--ccC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----I-----------------G--VKV--LSD 64 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r-~~~~~~~l~~----~-----------------g--~~~--~~~ 64 (274)
+||||+|.|++|+.+.+.|.+++. +.-+|...+++ +++....+.+ . | +.+ ..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~-~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQN-TDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSC-CSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred eEEEEECCCHHHHHHHHHHHhcCC-CCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 599999999999999999987620 01166555355 5555544432 1 1 111 123
Q ss_pred chhhc---cCCCEEEEeeCcccHHHHHHHhccccCCCCEEEEec
Q 024016 65 NNAVV---EYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 65 ~~~~~---~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~ 105 (274)
+.++. .++|+||.|++.....+........ ...++|||..
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~-GakkVVId~~ 124 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQA-GAKKVLITAP 124 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHT-TCSEEEESSC
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHHHHc-CCcEEEEeCC
Confidence 44432 2789999999877766665544322 1223466653
No 372
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.81 E-value=0.002 Score=54.64 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=54.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCH------HHHHHH---HHcCceec----cC---chhhccCC
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNL------KRRDAF---ESIGVKVL----SD---NNAVVEYS 72 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~------~~~~~l---~~~g~~~~----~~---~~~~~~~a 72 (274)
+|+|.|+|+ |.+|+++++.|++.|+ +|++. +|++ ++.+.+ ...++.+. .+ ..++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~ 78 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSH----PTFIY-ARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQV 78 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC----CEEEE-ECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCC----cEEEE-ECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCC
Confidence 568999985 9999999999999999 99999 8875 344333 23455432 12 34567789
Q ss_pred CEEEEeeCc---ccHHHHHHHhc
Q 024016 73 DVVVFSVKP---QVVKDVAMQIR 92 (274)
Q Consensus 73 DiIil~v~~---~~~~~v~~~i~ 92 (274)
|+||.+... .....+++...
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa~ 101 (321)
T 3c1o_A 79 DIVISALPFPMISSQIHIINAIK 101 (321)
T ss_dssp SEEEECCCGGGSGGGHHHHHHHH
T ss_pred CEEEECCCccchhhHHHHHHHHH
Confidence 999998853 23445554443
No 373
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=96.79 E-value=0.0033 Score=54.03 Aligned_cols=89 Identities=15% Similarity=0.151 Sum_probs=55.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----cC-------------------ceec--cC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----IG-------------------VKVL--SD 64 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r-~~~~~~~l~~----~g-------------------~~~~--~~ 64 (274)
+||||+|.|.+|.-+.+.|.++.. -+|...+++ +++....+.+ .| +.+. .+
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~---veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPD---IEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTT---EEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCC---eEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCC
Confidence 589999999999999998877632 256555355 4444444442 11 1122 13
Q ss_pred chhh-cc--CCCEEEEeeCcccHHHHHHHhccccCCCC--EEEEec
Q 024016 65 NNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVA 105 (274)
Q Consensus 65 ~~~~-~~--~aDiIil~v~~~~~~~v~~~i~~~l~~~~--~vis~~ 105 (274)
+.+. .. ++|+||.|++...-.+...... ..|. +|||..
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l---~~Gak~vVId~p 121 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHL---EAGAKKVIISAP 121 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHH---HCCCCEEEEeCC
Confidence 3332 22 7999999999877666665543 3344 788754
No 374
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=96.78 E-value=0.0046 Score=55.59 Aligned_cols=89 Identities=20% Similarity=0.240 Sum_probs=68.4
Q ss_pred CCCeEEEEccc----HHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCccc
Q 024016 9 ESFILGFIGAG----KMAESIAKGVAKSG-VLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQV 83 (274)
Q Consensus 9 ~~~~IgiIG~G----~mG~~~a~~L~~~g-~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~ 83 (274)
+.++|+|||++ ++|..+.++|.+.| + .|+.. |...... .|..++.+..++-+..|++++++|++.
T Consensus 7 ~p~siAVvGas~~~~~~g~~v~~~l~~~g~~----~v~pV-nP~~~~i-----~G~~~y~sl~~lp~~~Dlavi~vp~~~ 76 (457)
T 2csu_A 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKG----KVYPV-NIKEEEV-----QGVKAYKSVKDIPDEIDLAIIVVPKRF 76 (457)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSS----EEEEE-CSSCSEE-----TTEECBSSTTSCSSCCSEEEECSCHHH
T ss_pred CCCeEEEECcCCCCCchHHHHHHHHHHcCCC----EEEEE-CCCCCeE-----CCEeccCCHHHcCCCCCEEEEecCHHH
Confidence 45689999998 89999999999885 4 78777 6653221 588888888888778999999999999
Q ss_pred HHHHHHHhccccCCCCEEEEecCCCC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
+.+++++.... .. +.++-.+.|++
T Consensus 77 ~~~~v~e~~~~-Gi-~~vv~~s~G~~ 100 (457)
T 2csu_A 77 VKDTLIQCGEK-GV-KGVVIITAGFG 100 (457)
T ss_dssp HHHHHHHHHHH-TC-CEEEECCCSST
T ss_pred HHHHHHHHHHc-CC-CEEEEecCCCC
Confidence 99999886643 22 34555666663
No 375
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.77 E-value=0.0025 Score=53.54 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=38.3
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES 56 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~ 56 (274)
++.+++.|+| +|-+|.+++..|.+.|+ +|+++ +|++++.+.+.+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~----~V~i~-~R~~~~~~~l~~ 161 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA----EVVLC-GRKLDKAQAAAD 161 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC----EEEEE-ECCHHHHHHHHH
Confidence 3457899999 99999999999999998 89999 999988776654
No 376
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.75 E-value=0.0014 Score=57.17 Aligned_cols=93 Identities=16% Similarity=0.212 Sum_probs=55.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHh-CCCCCCCcEEEEeCCCHHH-HHHHHHcCceec--cCchhhccCCCEEEEeeCcccHH
Q 024016 11 FILGFIG-AGKMAESIAKGVAK-SGVLPPDRICTAVHSNLKR-RDAFESIGVKVL--SDNNAVVEYSDVVVFSVKPQVVK 85 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~-~g~~~~~~v~v~~~r~~~~-~~~l~~~g~~~~--~~~~~~~~~aDiIil~v~~~~~~ 85 (274)
+||+|+| .|.+|..+.+.++. ..+ +...++....++..+ ...+....+.+. .++.+ ++++|+||.|+|.....
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~-~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~-~~~~DvVf~a~g~~~s~ 79 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDF-DAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA-LKALDIIVTCQGGDYTN 79 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGG-GGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH-HHTCSEEEECSCHHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCC-CeEEEEEEEeCCCCCCccccCCCceEEEecCChHH-hcCCCEEEECCCchhHH
Confidence 6999999 99999999995544 433 112454441333211 101111122222 12333 57899999999988877
Q ss_pred HHHHHhccccCCC--CEEEEecCCC
Q 024016 86 DVAMQIRPLLSRK--KLLVSVAAGV 108 (274)
Q Consensus 86 ~v~~~i~~~l~~~--~~vis~~~g~ 108 (274)
+....+.. .| .+||+.++..
T Consensus 80 ~~a~~~~~---~G~k~vVID~ss~~ 101 (367)
T 1t4b_A 80 EIYPKLRE---SGWQGYWIDAASSL 101 (367)
T ss_dssp HHHHHHHH---TTCCCEEEECSSTT
T ss_pred HHHHHHHH---CCCCEEEEcCChhh
Confidence 77766543 34 3889876653
No 377
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.72 E-value=0.0025 Score=54.63 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=47.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCC---CCCcEEEEeCCCH--HHHH----HHHHc------CceeccCchhhccCC
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVL---PPDRICTAVHSNL--KRRD----AFESI------GVKVLSDNNAVVEYS 72 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~---~~~~v~v~~~r~~--~~~~----~l~~~------g~~~~~~~~~~~~~a 72 (274)
+.|||.|+|+ |.+|++++..|++.|+. ...+|.++ |+.+ ++.+ .+... .+....+..++++++
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~-D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~ 81 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLL-EIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDA 81 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE-CCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEE-eCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCC
Confidence 3469999996 99999999999998852 11278899 9874 2222 22211 122223456678899
Q ss_pred CEEEEee
Q 024016 73 DVVVFSV 79 (274)
Q Consensus 73 DiIil~v 79 (274)
|+||.+-
T Consensus 82 D~Vih~A 88 (327)
T 1y7t_A 82 DYALLVG 88 (327)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9999874
No 378
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=96.71 E-value=0.0044 Score=54.04 Aligned_cols=80 Identities=11% Similarity=0.082 Sum_probs=49.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----c-----------------C--cee--ccC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----I-----------------G--VKV--LSD 64 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r-~~~~~~~l~~----~-----------------g--~~~--~~~ 64 (274)
+||||+|.|++|+.+.+.|.+++. +.-+|...+++ +++....+.+ . | +.+ ..+
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~-~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQN-TDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSS-CSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred cEEEEECcCHHHHHHHHHHhcCCC-CCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 599999999999999999887620 01166555354 4555444443 1 1 111 123
Q ss_pred chhhc---cCCCEEEEeeCcccHHHHHHHh
Q 024016 65 NNAVV---EYSDVVVFSVKPQVVKDVAMQI 91 (274)
Q Consensus 65 ~~~~~---~~aDiIil~v~~~~~~~v~~~i 91 (274)
+.++. .++|+||.|++.....+.....
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~h 111 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKH 111 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHHH
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHHH
Confidence 33432 2789999999877665555443
No 379
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.66 E-value=0.0017 Score=54.98 Aligned_cols=62 Identities=15% Similarity=0.225 Sum_probs=45.1
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee------ccCchhhccCCCEEEEee
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV------LSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~------~~~~~~~~~~aDiIil~v 79 (274)
+|||.|.| +|.+|+.+++.|++.|+ +|++. +|++.+.+ +. ++.. ..+..++++++|+||-+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a 70 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN----TPIIL-TRSIGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLA 70 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCCC--------CCEEEECCCCHHHHHHHTTTCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC----EEEEE-eCCCCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEcc
Confidence 36899998 69999999999999999 99999 88855444 43 3221 233455677999999876
No 380
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.64 E-value=0.006 Score=51.36 Aligned_cols=35 Identities=14% Similarity=0.393 Sum_probs=30.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL 48 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~ 48 (274)
..||.|||+|.+|+.++.+|...|. .+++++ |.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGV---G~i~lv-D~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGI---GKLLLF-DYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-CCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCC---CEEEEE-CCCc
Confidence 4689999999999999999999996 378888 7765
No 381
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=96.64 E-value=0.00091 Score=57.59 Aligned_cols=91 Identities=13% Similarity=0.150 Sum_probs=56.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH--HcCceecc-CchhhccCCCEEEEeeCcccHHH
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE--SIGVKVLS-DNNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~--~~g~~~~~-~~~~~~~~aDiIil~v~~~~~~~ 86 (274)
|||+|+| .|.+|..+.+.|.+.+| +...+.....++.+. +.+. ...+.+.. ++.+ + ++|+||.|++.....+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~-~~~~l~~~~s~~~~g-~~l~~~g~~i~v~~~~~~~-~-~~DvV~~a~g~~~s~~ 76 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNF-PLSELRLYASPRSAG-VRLAFRGEEIPVEPLPEGP-L-PVDLVLASAGGGISRA 76 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC-CCSCCEEEECGGGSS-CEEEETTEEEEEEECCSSC-C-CCSEEEECSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEeeccccCC-CEEEEcCceEEEEeCChhh-c-CCCEEEECCCccchHH
Confidence 5899999 99999999999987666 333444331221100 0000 01122221 3333 4 8999999999887777
Q ss_pred HHHHhccccCCCCEEEEecCCC
Q 024016 87 VAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~g~ 108 (274)
....+. ..|..+|+.++..
T Consensus 77 ~a~~~~---~~G~~vId~s~~~ 95 (331)
T 2yv3_A 77 KALVWA---EGGALVVDNSSAW 95 (331)
T ss_dssp HHHHHH---HTTCEEEECSSSS
T ss_pred HHHHHH---HCCCEEEECCCcc
Confidence 666553 4577899887654
No 382
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.63 E-value=0.0017 Score=54.09 Aligned_cols=65 Identities=17% Similarity=0.289 Sum_probs=50.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCceec----cC---chhhccCCCEEEEeeC
Q 024016 11 FILGFIGA-GKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKVL----SD---NNAVVEYSDVVVFSVK 80 (274)
Q Consensus 11 ~~IgiIG~-G~mG~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~----~~---~~~~~~~aDiIil~v~ 80 (274)
|+|.|.|+ |.+|+++++.|++. |+ +|++. +|++++.+.+...++... .+ ..++++++|+||-+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~----~V~~~-~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS----QIIAI-VRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG----GEEEE-ESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC----eEEEE-EcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 47889986 99999999999998 88 99999 998887776655555321 12 2345678999998764
No 383
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.63 E-value=0.0026 Score=51.73 Aligned_cols=66 Identities=12% Similarity=0.112 Sum_probs=48.2
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCcee-c---c---CchhhccCCCEEEE
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKV-L---S---DNNAVVEYSDVVVF 77 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-~---~---~~~~~~~~aDiIil 77 (274)
+++++|.|.| .|.+|+.+++.|++. |+ +|++. +|++++.+.+ ..++.. . . +..++++++|+||-
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~----~V~~~-~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 75 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKF----VAKGL-VRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVI 75 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTC----EEEEE-ESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCc----EEEEE-EcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3567899997 599999999999999 78 99999 9998776554 222221 1 1 22345678899998
Q ss_pred ee
Q 024016 78 SV 79 (274)
Q Consensus 78 ~v 79 (274)
+.
T Consensus 76 ~a 77 (253)
T 1xq6_A 76 LT 77 (253)
T ss_dssp CC
T ss_pred ec
Confidence 75
No 384
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.62 E-value=0.0035 Score=54.06 Aligned_cols=75 Identities=11% Similarity=0.179 Sum_probs=52.2
Q ss_pred CCCCCCCCCCeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH----cCceec----cC---chhh
Q 024016 2 DAFPIPAESFILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES----IGVKVL----SD---NNAV 68 (274)
Q Consensus 2 ~~~~~~~~~~~IgiIG-~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~----~g~~~~----~~---~~~~ 68 (274)
+.+...++.++|.|.| +|.+|+.+++.|++. |+ .+|+++ +|++.+.+.+.+ .++... .+ ..++
T Consensus 13 ~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~---~~V~~~-~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~ 88 (344)
T 2gn4_A 13 PNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA---KKIIVY-SRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYA 88 (344)
T ss_dssp ---CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC---SEEEEE-ESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHH
T ss_pred ccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC---CEEEEE-ECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHH
Confidence 4455556678999998 599999999999998 84 289999 999887766543 233321 12 2345
Q ss_pred ccCCCEEEEeeC
Q 024016 69 VEYSDVVVFSVK 80 (274)
Q Consensus 69 ~~~aDiIil~v~ 80 (274)
++++|+||-+..
T Consensus 89 ~~~~D~Vih~Aa 100 (344)
T 2gn4_A 89 LEGVDICIHAAA 100 (344)
T ss_dssp TTTCSEEEECCC
T ss_pred HhcCCEEEECCC
Confidence 678999998763
No 385
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.62 E-value=0.01 Score=53.42 Aligned_cols=85 Identities=16% Similarity=0.245 Sum_probs=60.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--cCceec-cC---c----hhhccCCCEEEEee
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--IGVKVL-SD---N----NAVVEYSDVVVFSV 79 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~--~g~~~~-~~---~----~~~~~~aDiIil~v 79 (274)
.++|-|+|.|++|..+|+.|. .++ +|.+. .+++++++.+.+ .+..+. .| . ++-++++|+++.++
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~-~~~----~v~iI-E~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLE-QTY----SVKLI-ERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHT-TTS----EEEEE-ESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred ccEEEEEcchHHHHHHHHHhh-hcC----ceEEE-ecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 468999999999999999885 457 89999 999999999887 233332 22 1 22367899999999
Q ss_pred CcccHHHHHHHhccccCCCCE
Q 024016 80 KPQVVKDVAMQIRPLLSRKKL 100 (274)
Q Consensus 80 ~~~~~~~v~~~i~~~l~~~~~ 100 (274)
.++...=+...+...+...++
T Consensus 309 ~~De~Ni~~~llAk~~gv~kv 329 (461)
T 4g65_A 309 NEDETNIMSAMLAKRMGAKKV 329 (461)
T ss_dssp SCHHHHHHHHHHHHHTTCSEE
T ss_pred cCcHHHHHHHHHHHHcCCccc
Confidence 877654444444444444443
No 386
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.58 E-value=0.0063 Score=52.23 Aligned_cols=91 Identities=12% Similarity=0.094 Sum_probs=56.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----cC-------------------ceec--cC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----IG-------------------VKVL--SD 64 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r-~~~~~~~l~~----~g-------------------~~~~--~~ 64 (274)
.||||+|.|.+|.-+.+.|.+++. +.-+|...+++ +++....+.+ .| +.+. .+
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~-p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKN-PDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-TTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-CCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 489999999999999999987620 11277655354 4444444442 11 1122 13
Q ss_pred chhh-cc--CCCEEEEeeCcccHHHHHHHhccccCCCC--EEEEec
Q 024016 65 NNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVA 105 (274)
Q Consensus 65 ~~~~-~~--~aDiIil~v~~~~~~~v~~~i~~~l~~~~--~vis~~ 105 (274)
+.++ .. ++|+||.|+|...-.+...... ..|. +|||..
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l---~aGakkvVId~~ 122 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHL---QAGAKKVIITAP 122 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHH---HcCCcEEEEeCC
Confidence 3333 22 7999999999877666665543 3344 788754
No 387
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.55 E-value=0.0073 Score=55.63 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=29.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN 47 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~ 47 (274)
..||.|||+|.+|+.++.+|...|. .+++++ |.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGV---G~ItLv-D~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGV---RKITFV-DNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC---CEEEEE-CCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---CEEEEE-CCC
Confidence 4699999999999999999999997 378888 654
No 388
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.54 E-value=0.0056 Score=50.83 Aligned_cols=64 Identities=16% Similarity=0.326 Sum_probs=48.5
Q ss_pred eEEEEcc-cHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCceec----cC---chhhccCCCEEEEeeC
Q 024016 12 ILGFIGA-GKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKVL----SD---NNAVVEYSDVVVFSVK 80 (274)
Q Consensus 12 ~IgiIG~-G~mG~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~----~~---~~~~~~~aDiIil~v~ 80 (274)
||.|.|+ |.+|+.+++.|++. |+ +|++. +|++++.+.+...++... .+ ..++++++|+||-+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS----QIVAI-VRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG----GEEEE-ESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc----eEEEE-EcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 5788886 99999999999998 88 99999 898887766655555321 12 2345678999998763
No 389
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.50 E-value=0.0088 Score=53.76 Aligned_cols=78 Identities=14% Similarity=0.239 Sum_probs=55.6
Q ss_pred CCCCCCCCC--CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHH-cCceeccC--chhhccCCCE
Q 024016 1 MDAFPIPAE--SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-KRRDAFES-IGVKVLSD--NNAVVEYSDV 74 (274)
Q Consensus 1 ~~~~~~~~~--~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-~~~~~l~~-~g~~~~~~--~~~~~~~aDi 74 (274)
|..+|...+ .++|.|||.|..|..-++.|++.|. +|+++ +.+. ...+.+.+ .+++.... ..+.+.++|+
T Consensus 1 m~~~P~~~~l~~~~vlVvGgG~va~~k~~~L~~~ga----~V~vi-~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l 75 (457)
T 1pjq_A 1 MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLEAGA----RLTVN-ALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWL 75 (457)
T ss_dssp CCCEEEEECCBTCEEEEECCSHHHHHHHHHHHHTTB----EEEEE-ESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSE
T ss_pred CCceeeEEECCCCEEEEECCCHHHHHHHHHHHhCcC----EEEEE-cCCCCHHHHHHHhcCCEEEEECCCCccccCCccE
Confidence 555666553 5899999999999999999999998 99999 7643 33444443 34544211 2345678999
Q ss_pred EEEeeCccc
Q 024016 75 VVFSVKPQV 83 (274)
Q Consensus 75 Iil~v~~~~ 83 (274)
||.++.+..
T Consensus 76 Vi~at~~~~ 84 (457)
T 1pjq_A 76 AIAATDDDT 84 (457)
T ss_dssp EEECCSCHH
T ss_pred EEEcCCCHH
Confidence 999986554
No 390
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.48 E-value=0.0012 Score=57.44 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=49.2
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cCceec----c-C---chhhccCCCEEE
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IGVKVL----S-D---NNAVVEYSDVVV 76 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~----~-~---~~~~~~~aDiIi 76 (274)
|++|||.|.| +|.+|+.+++.|++. |+ +|++. +|++++.+.+.. .++... . + ..++++++|+||
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~----~V~~~-~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vi 96 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDW----EVFGM-DMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVIL 96 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSC----EEEEE-ESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCC----EEEEE-eCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEE
Confidence 4568999998 699999999999998 88 99999 898877655544 344321 1 2 223556899999
Q ss_pred Eee
Q 024016 77 FSV 79 (274)
Q Consensus 77 l~v 79 (274)
-+.
T Consensus 97 h~A 99 (372)
T 3slg_A 97 PLV 99 (372)
T ss_dssp ECB
T ss_pred EcC
Confidence 764
No 391
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=96.47 E-value=0.013 Score=50.25 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=56.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----c-----------C---------cee--cc
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----I-----------G---------VKV--LS 63 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r-~~~~~~~l~~----~-----------g---------~~~--~~ 63 (274)
+||||+|.|.+|..+.+.|.++++ +..+|...++. +++....+.+ . + +.+ ..
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~-p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSS-CSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred eEEEEECCCHHHHHHHHHHHhCCC-CCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 589999999999999999987632 22256555232 3333333332 1 1 011 12
Q ss_pred Cchhh-cc--CCCEEEEeeCcccHHHHHHHhccccCCCCEEEEecCCC
Q 024016 64 DNNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVSVAAGV 108 (274)
Q Consensus 64 ~~~~~-~~--~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis~~~g~ 108 (274)
++.++ .. ++|+||.|++...-.+...... ..|..+|.+++..
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l---~~Gak~V~iSap~ 125 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHL---QAGAKKVLITAPG 125 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHH---HTTCSEEEESSCC
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHH---HcCCEEEEECCcc
Confidence 33332 23 7999999999877666665543 3555666666553
No 392
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.45 E-value=0.0069 Score=55.03 Aligned_cols=69 Identities=20% Similarity=0.279 Sum_probs=52.2
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHcCceecc-CchhhccCCCEEEEe--eCcc
Q 024016 9 ESFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESIGVKVLS-DNNAVVEYSDVVVFS--VKPQ 82 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~-~a~~L~~~g~~~~~~v~v~~~r~~-~~~~~l~~~g~~~~~-~~~~~~~~aDiIil~--v~~~ 82 (274)
+.++|.|||.|..|.+ +|+.|.+.|+ +|+++ |++. ...+.|.+.|+.+.. ...+.+.++|+|++. +|++
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~----~V~~~-D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~ 94 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGY----QISGS-DLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISAD 94 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTC----EEEEE-CSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTT
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCC----eEEEE-ECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCC
Confidence 3479999999999986 9999999999 99999 8654 345667778887642 223446789999986 4543
No 393
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.42 E-value=0.009 Score=51.50 Aligned_cols=86 Identities=20% Similarity=0.241 Sum_probs=64.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCce-eccCchhhccCCCEEEEeeCcc-cHHHH
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVK-VLSDNNAVVEYSDVVVFSVKPQ-VVKDV 87 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~-~~~~~~~~~~~aDiIil~v~~~-~~~~v 87 (274)
..+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+.+.|+. +..+..++.+..|+||-|+... .+...
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~~~~ 251 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGA----EVSVF-ARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDLKDY 251 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTC----EEEEE-CSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHHHHH
Confidence 4689999999999999988888898 89999 9999999888888864 2244444444789999999755 66665
Q ss_pred HHHhccccCCCCEEEEe
Q 024016 88 AMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 88 ~~~i~~~l~~~~~vis~ 104 (274)
++-+ +++..++.+
T Consensus 252 ~~~l----~~~G~iv~~ 264 (348)
T 3two_A 252 LKLL----TYNGDLALV 264 (348)
T ss_dssp HTTE----EEEEEEEEC
T ss_pred HHHH----hcCCEEEEE
Confidence 5443 455556654
No 394
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.42 E-value=0.025 Score=52.08 Aligned_cols=68 Identities=10% Similarity=0.111 Sum_probs=53.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHc-Cceec-cCc--hh-----hccCCCEEEEeeC
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESI-GVKVL-SDN--NA-----VVEYSDVVVFSVK 80 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~-g~~~~-~~~--~~-----~~~~aDiIil~v~ 80 (274)
.++|.|+|+|.+|..+++.|.+.|+ +|++. +.++++.+.+.+. |+.+. .|. .+ -+++||.+++ ++
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~----~vvvi-d~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t~ 200 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNH----LFVVV-TDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-NL 200 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTC----CEEEE-ESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-CS
T ss_pred CCeEEEECCChHHHHHHHHHHHCCC----CEEEE-ECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-eC
Confidence 4689999999999999999999998 99999 9999999988886 76532 221 11 2568999987 55
Q ss_pred ccc
Q 024016 81 PQV 83 (274)
Q Consensus 81 ~~~ 83 (274)
++.
T Consensus 201 ~D~ 203 (565)
T 4gx0_A 201 SDP 203 (565)
T ss_dssp CHH
T ss_pred CcH
Confidence 444
No 395
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.42 E-value=0.016 Score=50.28 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=30.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSN 47 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~ 47 (274)
..+|.|||+|.+|+.++.+|..+|. .+++++ |++
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGv---g~i~lv-D~D 151 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGI---GEIILI-DND 151 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-ECC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---CeEEEE-CCC
Confidence 4689999999999999999999997 378888 765
No 396
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.39 E-value=0.0075 Score=51.73 Aligned_cols=67 Identities=13% Similarity=0.093 Sum_probs=47.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH----HHHHHHHH-------cCceec-c---C---chhhc
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNL----KRRDAFES-------IGVKVL-S---D---NNAVV 69 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~----~~~~~l~~-------~g~~~~-~---~---~~~~~ 69 (274)
++|+|.|.| +|.+|+.+++.|++.|+ +|++. +|++ +..+.+.. .++... . + ..+++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 98 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQ----VVIGL-DNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM 98 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 468999998 59999999999999999 99999 8854 33333332 233321 1 1 23456
Q ss_pred cCCCEEEEeeC
Q 024016 70 EYSDVVVFSVK 80 (274)
Q Consensus 70 ~~aDiIil~v~ 80 (274)
+++|+||-+..
T Consensus 99 ~~~d~Vih~A~ 109 (351)
T 3ruf_A 99 KGVDHVLHQAA 109 (351)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 78999998863
No 397
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=96.37 E-value=0.012 Score=50.83 Aligned_cols=88 Identities=17% Similarity=0.124 Sum_probs=56.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHH----HHH--cCcee--c
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDA----FES--IGVKV--L 62 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-------------------~~~~~----l~~--~g~~~--~ 62 (274)
..+|.|||+|..|+.++++|...|. .+++++ |.+. .|++. +.+ .++.+ .
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gv---g~itlv-D~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~ 111 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGV---KGLTML-DHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD 111 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-CCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---CEEEEE-ECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence 4689999999999999999999997 378887 5431 23333 333 23332 1
Q ss_pred -----cCchhhccCCCEEEEeeCcccHHHHHHHhccccCCCCEEEE
Q 024016 63 -----SDNNAVVEYSDVVVFSVKPQVVKDVAMQIRPLLSRKKLLVS 103 (274)
Q Consensus 63 -----~~~~~~~~~aDiIil~v~~~~~~~v~~~i~~~l~~~~~vis 103 (274)
....+.++++|+||.|+.+...+..+...... .+..+|+
T Consensus 112 ~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~--~~ip~i~ 155 (346)
T 1y8q_A 112 TEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHK--NSIKFFT 155 (346)
T ss_dssp CSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHH--TTCEEEE
T ss_pred ecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHH--cCCCEEE
Confidence 12345678899999998766555555554422 2344554
No 398
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.32 E-value=0.0021 Score=54.09 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=41.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee
Q 024016 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 11 ~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v 79 (274)
|||.|.|+ |-+|+.+++.|++.|| +|++. .|++.+.+ +.......+.++++|.||=+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~----~V~~l-~R~~~~~~------~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGH----EVTLV-SRKPGPGR------ITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSCCTTE------EEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCCCcCe------eecchhhHhhccCCCEEEEec
Confidence 78999987 9999999999999999 99999 88764321 111111123456788887543
No 399
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=96.31 E-value=0.0046 Score=53.45 Aligned_cols=44 Identities=14% Similarity=0.101 Sum_probs=37.4
Q ss_pred CCCCCCCCCCCeEEEEc-ccHHHHHHHHHHHh--CCCCCCCcEEEEeCCCHH
Q 024016 1 MDAFPIPAESFILGFIG-AGKMAESIAKGVAK--SGVLPPDRICTAVHSNLK 49 (274)
Q Consensus 1 ~~~~~~~~~~~~IgiIG-~G~mG~~~a~~L~~--~g~~~~~~v~v~~~r~~~ 49 (274)
|..|+..+++|+|.|.| +|-+|+++++.|++ .|+ +|++. +|++.
T Consensus 1 M~~~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~----~V~~~-~r~~~ 47 (362)
T 3sxp_A 1 MRYIDDELENQTILITGGAGFVGSNLAFHFQENHPKA----KVVVL-DKFRS 47 (362)
T ss_dssp CCSSSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTS----EEEEE-ECCCC
T ss_pred CcccchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCC----eEEEE-ECCCc
Confidence 66677677788999995 59999999999999 899 99999 88653
No 400
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.31 E-value=0.0042 Score=51.83 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=31.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL 48 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~ 48 (274)
+.++|.|||+|.+|..-++.|++.|+ +|+++ +.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga----~VtVi-ap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGC----KLTLV-SPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTC----EEEEE-EEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCC----EEEEE-cCCC
Confidence 45899999999999999999999999 99999 6643
No 401
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=96.30 E-value=0.011 Score=54.21 Aligned_cols=68 Identities=16% Similarity=0.157 Sum_probs=51.6
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCH--HHHHHHHHcCceec--cCchhhccCCCEEEEe--eCcc
Q 024016 10 SFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNL--KRRDAFESIGVKVL--SDNNAVVEYSDVVVFS--VKPQ 82 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~-~a~~L~~~g~~~~~~v~v~~~r~~--~~~~~l~~~g~~~~--~~~~~~~~~aDiIil~--v~~~ 82 (274)
.++|-|||.|..|.+ +|+-|.+.|+ +|+++ |++. ...+.|.+.|+.+. .++.+...++|+|+.. +|++
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~----~V~~s-D~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~ 93 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGH----TVTGS-DANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRG 93 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTT
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCC----EEEEE-CCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCC
Confidence 478999999999986 7888899999 99999 8753 34567777888764 2344444679999986 4544
No 402
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.28 E-value=0.003 Score=55.09 Aligned_cols=66 Identities=18% Similarity=0.128 Sum_probs=47.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec----cC---chhhccCCCEEEEee
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL----SD---NNAVVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~----~~---~~~~~~~aDiIil~v 79 (274)
++|+|.|.|+ |.+|+.+++.|++.|+ +|++. +|++.+...+...++... .+ ..++++++|+||-+.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A 101 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH----YVIAS-DWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 101 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC----eEEEE-ECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence 4579999987 9999999999999999 99999 887654332222233321 11 234567899999875
No 403
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=96.27 E-value=0.023 Score=46.80 Aligned_cols=85 Identities=14% Similarity=0.161 Sum_probs=56.3
Q ss_pred CCCeEEEEcc-c-HHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Cccc
Q 024016 9 ESFILGFIGA-G-KMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (274)
Q Consensus 9 ~~~~IgiIG~-G-~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~ 83 (274)
+.+++-|.|. | .+|.++++.|.+.|+ +|++. +|+.++.+.+.+. + .+ ....++.++.. .++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~-l------~~-~~~~~~~~~~~Dl~~~~~ 87 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA----DVVIS-DYHERRLGETRDQ-L------AD-LGLGRVEAVVCDVTSTEA 87 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-H------HT-TCSSCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC----EEEEe-cCCHHHHHHHHHH-H------Hh-cCCCceEEEEeCCCCHHH
Confidence 3467888898 8 599999999999999 99999 9998877665431 0 00 01234444444 3455
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
++.+++++...+.+=.++|+..+
T Consensus 88 v~~~~~~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 88 VDALITQTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHhCCCcEEEECCC
Confidence 77777776654444357777643
No 404
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=96.26 E-value=0.024 Score=46.20 Aligned_cols=89 Identities=19% Similarity=0.227 Sum_probs=56.4
Q ss_pred CCCCCCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---
Q 024016 4 FPIPAESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV--- 79 (274)
Q Consensus 4 ~~~~~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v--- 79 (274)
||..++.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+ ...++.++..
T Consensus 1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~ 66 (247)
T 2jah_A 1 MPSALQGKVALITGASSGIGEATARALAAEGA----AVAIA-ARRVEKLRALGDE-------LTA--AGAKVHVLELDVA 66 (247)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTT
T ss_pred CCccCCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHh--cCCcEEEEECCCC
Confidence 35555666777775 58999999999999999 99999 9998877655431 000 0223444433
Q ss_pred CcccHHHHHHHhccccCCCCEEEEecC
Q 024016 80 KPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 80 ~~~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++.++.+++++...+.+=.++|+..+
T Consensus 67 ~~~~~~~~~~~~~~~~g~id~lv~nAg 93 (247)
T 2jah_A 67 DRQGVDAAVASTVEALGGLDILVNNAG 93 (247)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 345567777766554433356776543
No 405
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=96.24 E-value=0.013 Score=52.84 Aligned_cols=63 Identities=25% Similarity=0.289 Sum_probs=48.8
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCH-HHHHHHHHcCceec--cCchhhccCCCEEEEe
Q 024016 10 SFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNL-KRRDAFESIGVKVL--SDNNAVVEYSDVVVFS 78 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~-~a~~L~~~g~~~~~~v~v~~~r~~-~~~~~l~~~g~~~~--~~~~~~~~~aDiIil~ 78 (274)
.++|.|||.|..|.+ +|+.|.+.|+ +|+++ |... ...+.|.+.|+.+. .+. +.++++|+|+..
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~G~----~V~~~-D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s 84 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNEGY----QISGS-DIADGVVTQRLAQAGAKIYIGHAE-EHIEGASVVVVS 84 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTC----EEEEE-ESCCSHHHHHHHHTTCEEEESCCG-GGGTTCSEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHHhCCC----EEEEE-CCCCCHHHHHHHhCCCEEECCCCH-HHcCCCCEEEEC
Confidence 568999999999997 9999999999 99999 7654 33456766787764 223 345789998886
No 406
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=96.18 E-value=0.025 Score=46.66 Aligned_cols=86 Identities=10% Similarity=0.092 Sum_probs=54.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccH
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~ 84 (274)
+.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+.....++.++.. .++.+
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~v 79 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGA----KLSLV-DVSSEGLEASKAA-------VLETAPDAEVLTTVADVSDEAQV 79 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHHHCTTCCEEEEECCTTSHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHhhcCCceEEEEEccCCCHHHH
Confidence 345666665 69999999999999999 99999 9998876655431 001001233444443 24456
Q ss_pred HHHHHHhccccCCCCEEEEecC
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+++++++...+.+=.++|+..+
T Consensus 80 ~~~~~~~~~~~g~id~lv~nAg 101 (267)
T 1iy8_A 80 EAYVTATTERFGRIDGFFNNAG 101 (267)
T ss_dssp HHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 7777766554433357777643
No 407
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=96.18 E-value=0.027 Score=45.68 Aligned_cols=86 Identities=12% Similarity=0.169 Sum_probs=53.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee-----Cc
Q 024016 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV-----KP 81 (274)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v-----~~ 81 (274)
++.+++-|.|+ |.+|.++++.|.+.|+ +|++. +|++++.+.+.+. + .+ .......++.. .+
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~------~~-~~~~~~~~~~~d~d~~~~ 78 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGA----SVVLL-GRTEASLAEVSDQ-I------KS-AGQPQPLIIALNLENATA 78 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-H------HH-TTSCCCEEEECCTTTCCH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEE-ecCHHHHHHHHHH-H------Hh-cCCCCceEEEeccccCCH
Confidence 44556766665 9999999999999999 99999 9999887765531 0 00 00011222222 23
Q ss_pred ccHHHHHHHhccccCCCCEEEEecC
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+.+..+++++...+.+=.++|+..+
T Consensus 79 ~~~~~~~~~~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 79 QQYRELAARVEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCc
Confidence 4566777766554434357777644
No 408
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=96.13 E-value=0.0099 Score=44.00 Aligned_cols=78 Identities=12% Similarity=0.152 Sum_probs=49.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHHcCceecc--Cchhhcc--CCCEEEEeeCccc
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFESIGVKVLS--DNNAVVE--YSDVVVFSVKPQV 83 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~--~~~~~~~--~aDiIil~v~~~~ 83 (274)
+.+++.|||+|..|..++..|.+. || ++..+++.++++.... -.|+.+.. +..+.++ +.|.|++|+|...
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~----~vvg~~d~~~~~~g~~-i~g~pV~g~~~l~~~~~~~~id~viia~~~~~ 77 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEF----HPIAFIDDDRKKHKTT-MQGITIYRPKYLERLIKKHCISTVLLAVPSAS 77 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSE----EEEEEECSCGGGTTCE-ETTEEEECGGGHHHHHHHHTCCEEEECCTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCc----EEEEEEECCcccCCCE-ecCeEEECHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 456899999999999999999875 66 7776657765432110 03554433 2333332 5788888887433
Q ss_pred ---HHHHHHHh
Q 024016 84 ---VKDVAMQI 91 (274)
Q Consensus 84 ---~~~v~~~i 91 (274)
..+++..+
T Consensus 78 ~~~~~~i~~~l 88 (141)
T 3nkl_A 78 QVQKKVIIESL 88 (141)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444443
No 409
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=96.11 E-value=0.016 Score=50.77 Aligned_cols=94 Identities=20% Similarity=0.237 Sum_probs=63.1
Q ss_pred CeEEEEcccHHHHHHHH-HHHhCCCCCCCcEEEEeCCCHHHHHHHHHcC------------------ceeccC-c---hh
Q 024016 11 FILGFIGAGKMAESIAK-GVAKSGVLPPDRICTAVHSNLKRRDAFESIG------------------VKVLSD-N---NA 67 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~-~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g------------------~~~~~~-~---~~ 67 (274)
||+..+|+|++|+.+.. -|.++|+ +|+.. +++....+.|.+.| ++..++ . .+
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g~----~v~f~-dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~ 75 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAGI----QLTFA-DVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVD 75 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHH
T ss_pred CcEEEECCCccchhhHHHHHHHcCC----eEEEE-eCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHH
Confidence 68999999999977655 4557888 99999 99998888887632 111111 1 23
Q ss_pred hccCCCEEEEeeCcccHHHHHHHhccc--------cCCCCEEEEecCCCC
Q 024016 68 VVEYSDVVVFSVKPQVVKDVAMQIRPL--------LSRKKLLVSVAAGVK 109 (274)
Q Consensus 68 ~~~~aDiIil~v~~~~~~~v~~~i~~~--------l~~~~~vis~~~g~~ 109 (274)
.+.++|+|.+++.|+..+.+...|... ..+.-.|++|-+-..
T Consensus 76 ~i~~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~pltilsCeN~~~ 125 (382)
T 3h2z_A 76 LIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNIIACENMVR 125 (382)
T ss_dssp HHTTCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEEEECCSSTT
T ss_pred HHcCCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEEEECCCccc
Confidence 566899999999887766555433221 123445778766544
No 410
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.08 E-value=0.015 Score=50.41 Aligned_cols=86 Identities=9% Similarity=0.025 Sum_probs=60.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-ccC----chh----hc--cCCCEEEEe
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LSD----NNA----VV--EYSDVVVFS 78 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-~~~----~~~----~~--~~aDiIil~ 78 (274)
..+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+.+.|+.. .+. ..+ .. ...|+||-|
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~ 264 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATGA----EVIVT-SSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEI 264 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC----EEEEE-ecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 4689999999999999998888998 99999 99999998888777642 211 111 11 157888888
Q ss_pred eCcccHHHHHHHhccccCCCCEEEEe
Q 024016 79 VKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 79 v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
+....+...++.+. ++..++.+
T Consensus 265 ~g~~~~~~~~~~l~----~~G~iv~~ 286 (363)
T 3uog_A 265 AGGAGLGQSLKAVA----PDGRISVI 286 (363)
T ss_dssp TTSSCHHHHHHHEE----EEEEEEEE
T ss_pred CChHHHHHHHHHhh----cCCEEEEE
Confidence 77665665555433 33445544
No 411
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=96.08 E-value=0.028 Score=46.30 Aligned_cols=87 Identities=15% Similarity=0.186 Sum_probs=54.5
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---Ccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
++.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+ ..- ......+.++.. .++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~l~~--------~~~~~~~~~~~~D~~~~~ 71 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA----KVALV-DWNLEAGVQCKAALHE--------QFEPQKTLFIQCDVADQQ 71 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHHTT--------TSCGGGEEEEECCTTSHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHHHHh--------hcCCCceEEEecCCCCHH
Confidence 3445777776 59999999999999999 99999 999877655432 110 000112333333 345
Q ss_pred cHHHHHHHhccccCCCCEEEEecCC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAAG 107 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~g 107 (274)
.+..+++++...+.+=.++|+..+.
T Consensus 72 ~v~~~~~~~~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 72 QLRDTFRKVVDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5777777665544333577876543
No 412
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.02 E-value=0.047 Score=47.03 Aligned_cols=86 Identities=14% Similarity=0.168 Sum_probs=60.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-cc-----Cch-hh---c-----cCCCE
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LS-----DNN-AV---V-----EYSDV 74 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-~~-----~~~-~~---~-----~~aDi 74 (274)
..+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+.+.|+.. .+ +.. ++ . ...|+
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~ 243 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGA----FVVCT-ARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC----EEEEE-cCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCE
Confidence 4689999999999999988888898 88888 99999988888877642 11 111 11 1 35899
Q ss_pred EEEeeCcc-cHHHHHHHhccccCCCCEEEEe
Q 024016 75 VVFSVKPQ-VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 75 Iil~v~~~-~~~~v~~~i~~~l~~~~~vis~ 104 (274)
||-++... .+...+.- ++++..++.+
T Consensus 244 vid~~g~~~~~~~~~~~----l~~~G~iv~~ 270 (352)
T 1e3j_A 244 TIDCSGNEKCITIGINI----TRTGGTLMLV 270 (352)
T ss_dssp EEECSCCHHHHHHHHHH----SCTTCEEEEC
T ss_pred EEECCCCHHHHHHHHHH----HhcCCEEEEE
Confidence 99998654 34444433 4455566654
No 413
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=96.02 E-value=0.022 Score=48.76 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=55.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC-CHHHHHHHHH----cC-------------------ceec--cC
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS-NLKRRDAFES----IG-------------------VKVL--SD 64 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r-~~~~~~~l~~----~g-------------------~~~~--~~ 64 (274)
+||||+|.|++|+.+.+.|.++.+ +|..+++. +++....+.+ .| +.+. .+
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~----evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGV----EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC----CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC----EEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCC
Confidence 489999999999999999887755 77766343 4444444443 22 1121 13
Q ss_pred chhh-cc--CCCEEEEeeCcccHHHHHHHhccccCCCC--EEEEec
Q 024016 65 NNAV-VE--YSDVVVFSVKPQVVKDVAMQIRPLLSRKK--LLVSVA 105 (274)
Q Consensus 65 ~~~~-~~--~aDiIil~v~~~~~~~v~~~i~~~l~~~~--~vis~~ 105 (274)
+.+. .. ++|+||.|++...-.+...... ..|. +|||..
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l---~aGakkvVIsap 119 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHL---EGGAKKVIITAP 119 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHH---HCCCCEEEECCC
Confidence 3332 22 6899999998777666655443 3344 777653
No 414
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.00 E-value=0.008 Score=51.98 Aligned_cols=67 Identities=15% Similarity=0.262 Sum_probs=48.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH--HHHHH-cCcee-ccC-------chhhccCCCEEE
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR--DAFES-IGVKV-LSD-------NNAVVEYSDVVV 76 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~--~~l~~-~g~~~-~~~-------~~~~~~~aDiIi 76 (274)
..|+|.|.|+ |.+|+++++.|++.|+ +|++. +|++++. +.+.+ .++.. ..| ..++++++|+||
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi 78 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGH----HVRAQ-VHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAF 78 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC----CEEEE-ESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC----EEEEE-ECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence 3578999985 9999999999999999 99998 8887654 44443 24432 122 234567899999
Q ss_pred EeeC
Q 024016 77 FSVK 80 (274)
Q Consensus 77 l~v~ 80 (274)
.+..
T Consensus 79 ~~a~ 82 (352)
T 1xgk_A 79 INTT 82 (352)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8764
No 415
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=95.99 E-value=0.011 Score=54.15 Aligned_cols=43 Identities=23% Similarity=0.370 Sum_probs=36.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES 56 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~ 56 (274)
+.+++.|+|+|.+|.+++..|.+.|. +|+++ +|+.++++.+.+
T Consensus 363 ~~k~vlV~GaGGig~aia~~L~~~G~----~V~i~-~R~~~~a~~la~ 405 (523)
T 2o7s_A 363 ASKTVVVIGAGGAGKALAYGAKEKGA----KVVIA-NRTYERALELAE 405 (523)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHHCC-----CEEE-ESSHHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHH
Confidence 45679999999999999999999998 89999 999999888765
No 416
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.98 E-value=0.022 Score=51.64 Aligned_cols=65 Identities=22% Similarity=0.279 Sum_probs=49.4
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhCCCCCCCcEEEEeCCCHH-HHHHHHHcCceecc-CchhhccCCCEEEEe
Q 024016 9 ESFILGFIGAGKMAES-IAKGVAKSGVLPPDRICTAVHSNLK-RRDAFESIGVKVLS-DNNAVVEYSDVVVFS 78 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~-~a~~L~~~g~~~~~~v~v~~~r~~~-~~~~l~~~g~~~~~-~~~~~~~~aDiIil~ 78 (274)
+.++|.|||.|..|.+ +|+.|.+.|+ +|+++ |.... ..+.|.+.|+.+.. ...+.++++|+|++.
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~~G~----~V~~~-D~~~~~~~~~l~~~gi~~~~g~~~~~~~~a~~vv~s 85 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLANEGY----QISGS-DLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVS 85 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHTTC----EEEEE-CSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEEC
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHhCCC----eEEEE-CCCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEEC
Confidence 3578999999999997 9999999999 99999 87543 34567667887641 112345789998886
No 417
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=95.98 E-value=0.053 Score=44.43 Aligned_cols=81 Identities=16% Similarity=0.212 Sum_probs=55.0
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---Ccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
++.+++-|.| .|-+|.++++.|.+.|+ +|++. +|++++.+.+.+ .+ .++.++.. .++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~ 67 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGA----TVAIA-DIDIERARQAAAEIG-------------PAAYAVQMDVTRQD 67 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHHC-------------TTEEEEECCTTCHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHhC-------------CCceEEEeeCCCHH
Confidence 3456777776 58999999999999999 99999 999988776554 21 12233332 345
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++++++++...+.+=.++|+..+
T Consensus 68 ~v~~~~~~~~~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 68 SIDAAIAATVEHAGGLDILVNNAA 91 (259)
T ss_dssp HHHHHHHHHHHHSSSCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCC
Confidence 577777776655544457777643
No 418
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=95.97 E-value=0.01 Score=50.61 Aligned_cols=65 Identities=15% Similarity=0.183 Sum_probs=44.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH---H---HHHH-cCceec-------cCchhhccCCCE
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR---D---AFES-IGVKVL-------SDNNAVVEYSDV 74 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~---~---~l~~-~g~~~~-------~~~~~~~~~aDi 74 (274)
.++|.|.| +|-+|+++++.|++.|+ +|.+. .|++++. . .+.. .++... .+..++++++|+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~ 83 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGY----AVNTT-VRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDF 83 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTC----EEEEE-ESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC----EEEEE-EcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCE
Confidence 57899998 69999999999999999 99987 7765432 1 2221 233221 123456678999
Q ss_pred EEEee
Q 024016 75 VVFSV 79 (274)
Q Consensus 75 Iil~v 79 (274)
||-+.
T Consensus 84 Vih~A 88 (338)
T 2rh8_A 84 VFHVA 88 (338)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 99753
No 419
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=95.96 E-value=0.035 Score=45.45 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=53.5
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---Ccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
++.++|-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+ .+ .++.++.. .++
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~ 71 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA----SAVLL-DLPNSGGEAQAKKLG-------------NNCVFAPADVTSEK 71 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ECTTSSHHHHHHHHC-------------TTEEEEECCTTCHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC----EEEEE-eCCcHhHHHHHHHhC-------------CceEEEEcCCCCHH
Confidence 3456777775 59999999999999999 99999 898876665443 11 22333333 245
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.+.++++++...+.+=.++|+..+
T Consensus 72 ~v~~~~~~~~~~~g~id~li~~Ag 95 (265)
T 2o23_A 72 DVQTALALAKGKFGRVDVAVNCAG 95 (265)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHCCCCCEEEECCc
Confidence 567777766544433356777643
No 420
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.92 E-value=0.032 Score=45.05 Aligned_cols=81 Identities=14% Similarity=0.199 Sum_probs=53.6
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCC--CCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Ccc
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSG--VLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g--~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
+.++|.|.| .|.+|.++++.|++.| + +|++. +|++++.+.+.+. ...++.++.. .++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~----~V~~~-~r~~~~~~~l~~~------------~~~~~~~~~~D~~~~~ 64 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR----HIIAT-ARDVEKATELKSI------------KDSRVHVLPLTVTCDK 64 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCC----EEEEE-ESSGGGCHHHHTC------------CCTTEEEEECCTTCHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCc----EEEEE-ecCHHHHHHHHhc------------cCCceEEEEeecCCHH
Confidence 455777775 5999999999999999 8 99999 9998877665432 1223444433 234
Q ss_pred cHHHHHHHhccccC--CCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLS--RKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~--~~~~vis~~~ 106 (274)
.+.++++++...+. +=..+|++.+
T Consensus 65 ~~~~~~~~~~~~~g~~~id~li~~Ag 90 (250)
T 1yo6_A 65 SLDTFVSKVGEIVGSDGLSLLINNAG 90 (250)
T ss_dssp HHHHHHHHHHHHHGGGCCCEEEECCC
T ss_pred HHHHHHHHHHHhcCCCCCcEEEECCc
Confidence 56677766654432 2246777643
No 421
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=95.89 E-value=0.035 Score=44.69 Aligned_cols=80 Identities=21% Similarity=0.296 Sum_probs=52.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeCcccHHHHH
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVKPQVVKDVA 88 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~~~~~~~v~ 88 (274)
.||.+++|+ |+||+.+.+.....++ ++....++... ++ +.++|++|=.+.|+.+.+.+
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~~~~----elv~~id~~~~-------------~~----l~~~DVvIDFT~P~a~~~~~ 70 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSEKGH----ELVLKVDVNGV-------------EE----LDSPDVVIDFSSPEALPKTV 70 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEEETTEE-------------EE----CSCCSEEEECSCGGGHHHHH
T ss_pred cceeEEEEecCHHHHHHHHHHhCCCC----EEEEEEcCCCc-------------cc----ccCCCEEEECCCHHHHHHHH
Confidence 479999998 9999999887666676 65543365431 11 24789999666677766666
Q ss_pred HHhccccCCCCEEEEecCCCCHHHH
Q 024016 89 MQIRPLLSRKKLLVSVAAGVKLKDL 113 (274)
Q Consensus 89 ~~i~~~l~~~~~vis~~~g~~~~~l 113 (274)
+.... .+..+|.-+.|.+.+.+
T Consensus 71 ~~~~~---~g~~~ViGTTG~~~~~~ 92 (228)
T 1vm6_A 71 DLCKK---YRAGLVLGTTALKEEHL 92 (228)
T ss_dssp HHHHH---HTCEEEECCCSCCHHHH
T ss_pred HHHHH---cCCCEEEeCCCCCHHHH
Confidence 54433 23455655667876654
No 422
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.89 E-value=0.0067 Score=49.10 Aligned_cols=70 Identities=14% Similarity=0.171 Sum_probs=47.5
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-------ccCchhhccCCCEEEEee
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-------LSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-------~~~~~~~~~~aDiIil~v 79 (274)
|+.|+|.|.| .|.+|.++++.|++.|+. .+|++. +|++++.+.+...++.. ..+..+++++.|+||-+.
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~--~~V~~~-~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 92 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF--SKVTLI-GRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCL 92 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC--SEEEEE-ESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC--CEEEEE-EcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECC
Confidence 3457899998 699999999999999862 268888 88876543322222221 122345566889999887
Q ss_pred C
Q 024016 80 K 80 (274)
Q Consensus 80 ~ 80 (274)
.
T Consensus 93 g 93 (242)
T 2bka_A 93 G 93 (242)
T ss_dssp C
T ss_pred C
Confidence 4
No 423
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.89 E-value=0.016 Score=49.79 Aligned_cols=68 Identities=15% Similarity=0.169 Sum_probs=47.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH----HHHHHHH-------cCceec----cC---chhh
Q 024016 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLK----RRDAFES-------IGVKVL----SD---NNAV 68 (274)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~----~~~~l~~-------~g~~~~----~~---~~~~ 68 (274)
+++|+|.|.|+ |.+|+.+++.|++.|+ +|++. +|++. +.+.+.+ .++... .+ ..++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 99 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ----KVVGL-DNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA 99 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHH
Confidence 34679999987 9999999999999999 99999 88642 3333321 233321 12 2345
Q ss_pred ccCCCEEEEeeC
Q 024016 69 VEYSDVVVFSVK 80 (274)
Q Consensus 69 ~~~aDiIil~v~ 80 (274)
++++|+||-+..
T Consensus 100 ~~~~d~vih~A~ 111 (352)
T 1sb8_A 100 CAGVDYVLHQAA 111 (352)
T ss_dssp HTTCSEEEECCS
T ss_pred hcCCCEEEECCc
Confidence 678999998864
No 424
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.89 E-value=0.065 Score=47.12 Aligned_cols=92 Identities=10% Similarity=0.075 Sum_probs=61.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cC----ch----hhc--cCCCEEEE
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD----NN----AVV--EYSDVVVF 77 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~----~~----~~~--~~aDiIil 77 (274)
...+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+++.|+... +. .. +.. ...|+||-
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid 288 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGA---SKVILS-EPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLE 288 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---CEEEEE-CCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEE
Confidence 34689999999999998888877886 268888 999999988888886422 11 11 111 25899999
Q ss_pred eeCcc--cHHHHHHHhccccCCCCEEEEe
Q 024016 78 SVKPQ--VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 78 ~v~~~--~~~~v~~~i~~~l~~~~~vis~ 104 (274)
|+... .....+.-+...++++..++.+
T Consensus 289 ~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 289 ATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 98654 3444443331223566666654
No 425
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.81 E-value=0.038 Score=44.68 Aligned_cols=81 Identities=12% Similarity=0.089 Sum_probs=54.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccH
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~ 84 (274)
.++++-|.|+ |-+|.++++.|.+.|+ +|++. +|++++.+++.+.- . ..+.++.. .++.+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~~-----------~-~~~~~~~~D~~~~~~v 64 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH----QVSMM-GRRYQRLQQQELLL-----------G-NAVIGIVADLAHHEDV 64 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHH-----------G-GGEEEEECCTTSHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHHh-----------c-CCceEEECCCCCHHHH
Confidence 3456777765 8999999999999999 99999 99998877655410 0 02333333 34557
Q ss_pred HHHHHHhccccCCCCEEEEecC
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+.+++++...+.+=.++|+..+
T Consensus 65 ~~~~~~~~~~~g~id~lvnnAg 86 (235)
T 3l6e_A 65 DVAFAAAVEWGGLPELVLHCAG 86 (235)
T ss_dssp HHHHHHHHHHHCSCSEEEEECC
T ss_pred HHHHHHHHHhcCCCcEEEECCC
Confidence 7777776654444457777644
No 426
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.79 E-value=0.011 Score=51.50 Aligned_cols=95 Identities=11% Similarity=0.135 Sum_probs=65.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------HHHHHHHH-----cC-ceeccCchhhccCCC
Q 024016 7 PAESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------KRRDAFES-----IG-VKVLSDNNAVVEYSD 73 (274)
Q Consensus 7 ~~~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-------~~~~~l~~-----~g-~~~~~~~~~~~~~aD 73 (274)
.....||.|+|+|.-|.++++-+...|. .+|+++ |++- ++.+.+++ .. .....+..|+++++|
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga---~~I~v~-D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~AD 260 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGA---TKVTVV-DKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGAD 260 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTC---CEEEEE-ETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCC---CeEEEE-ECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCC
Confidence 3455799999999999999999999886 489999 8763 12222222 11 111346788999999
Q ss_pred EEEEeeCccc-HHHHHHHhccccCCCCEEEEecCCCC
Q 024016 74 VVVFSVKPQV-VKDVAMQIRPLLSRKKLLVSVAAGVK 109 (274)
Q Consensus 74 iIil~v~~~~-~~~v~~~i~~~l~~~~~vis~~~g~~ 109 (274)
++|=+..|.. .+++++. +.++.+|+.++++.+
T Consensus 261 V~IG~Sapgl~T~EmVk~----Ma~~pIIfalsNPt~ 293 (398)
T 2a9f_A 261 IFIGVSAPGVLKAEWISK----MAARPVIFAMANPIP 293 (398)
T ss_dssp SEEECCSTTCCCHHHHHT----SCSSCEEEECCSSSC
T ss_pred EEEecCCCCCCCHHHHHh----hCCCCEEEECCCCCc
Confidence 8776544443 4666665 457889999988764
No 427
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.79 E-value=0.0064 Score=55.47 Aligned_cols=62 Identities=11% Similarity=0.174 Sum_probs=46.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v 79 (274)
+|||.|.| +|.+|+.+++.|++.|+ +|++. +|++.+.+.+ .....+...+.++++|+||-+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~----~V~~l-~R~~~~~~~v---~~d~~~~~~~~l~~~D~Vih~A 209 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH----EVIQL-VRKEPKPGKR---FWDPLNPASDLLDGADVLVHLA 209 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESSSCCTTCE---ECCTTSCCTTTTTTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCCCCccce---eecccchhHHhcCCCCEEEECC
Confidence 67999998 69999999999999999 99999 8887653211 1111223355677899999875
No 428
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=95.79 E-value=0.012 Score=49.72 Aligned_cols=64 Identities=14% Similarity=0.188 Sum_probs=38.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhcc--CCCEEEEee
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVE--YSDVVVFSV 79 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~--~aDiIil~v 79 (274)
.|+|.|.|+ |.+|+++++.|++.|+ +|++. +|++.... .....+.-..+..++++ ++|+||-+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A 68 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW----HAVGC-GFRRARPK-FEQVNLLDSNAVHHIIHDFQPHVIVHCA 68 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC----EEEEE-C-------------------CHHHHHHHCCSEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC----eEEEE-ccCCCCCC-eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence 368999987 9999999999999999 99999 88764411 11111111123334454 489999775
No 429
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=95.76 E-value=0.023 Score=50.57 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=51.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH-------------------HHHHHH----HH--cCce--ec
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL-------------------KRRDAF----ES--IGVK--VL 62 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~-------------------~~~~~l----~~--~g~~--~~ 62 (274)
..||.|||+|.+|+.++++|...|. .+++++ |.+. .|++.+ .+ .++. ..
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGv---g~i~iv-D~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~ 115 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGF---RQIHVI-DMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH 115 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTC---CCEEEE-ECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC---CEEEEE-cCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEE
Confidence 4689999999999999999999997 378777 5321 123322 22 2232 11
Q ss_pred -----cCchhhccCCCEEEEeeCcccHHHHHHH
Q 024016 63 -----SDNNAVVEYSDVVVFSVKPQVVKDVAMQ 90 (274)
Q Consensus 63 -----~~~~~~~~~aDiIil~v~~~~~~~v~~~ 90 (274)
....+.++++|+||.|+..-..+..+..
T Consensus 116 ~~~i~~~~~~~~~~~DlVi~~~Dn~~~R~~in~ 148 (434)
T 1tt5_B 116 FNKIQDFNDTFYRQFHIIVCGLDSIIARRWING 148 (434)
T ss_dssp ESCGGGBCHHHHTTCSEEEECCSCHHHHHHHHH
T ss_pred ecccchhhHHHhcCCCEEEECCCCHHHHHHHHH
Confidence 1224667889999999876655555544
No 430
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.75 E-value=0.029 Score=48.07 Aligned_cols=86 Identities=12% Similarity=0.159 Sum_probs=59.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-c----Cchhhc----cCCCEEEEeeC
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-S----DNNAVV----EYSDVVVFSVK 80 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~----~~~~~~----~~aDiIil~v~ 80 (274)
..+|.|+|+|.+|...++.+...|. +|++. +|++++.+.+.+.|+... + +..+.+ ...|+||-++.
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g 239 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGL----NVVAV-DIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 239 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC----EEEEE-eCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCC
Confidence 4689999999999999999888998 99999 999999988877776421 1 111111 35788888876
Q ss_pred c-ccHHHHHHHhccccCCCCEEEEe
Q 024016 81 P-QVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 81 ~-~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
. ..+...++-+ +++..++.+
T Consensus 240 ~~~~~~~~~~~l----~~~G~~v~~ 260 (339)
T 1rjw_A 240 SKPAFQSAYNSI----RRGGACVLV 260 (339)
T ss_dssp CHHHHHHHHHHE----EEEEEEEEC
T ss_pred CHHHHHHHHHHh----hcCCEEEEe
Confidence 4 4444444433 344455544
No 431
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.75 E-value=0.061 Score=44.27 Aligned_cols=88 Identities=14% Similarity=0.076 Sum_probs=56.4
Q ss_pred CCCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Ccc
Q 024016 7 PAESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 7 ~~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
.++.+++-|.| .|-+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+......+.++.. .++
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dv~~~~ 72 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGA----AVAFC-ARDGERLRAAESA-------LRQRFPGARLFASVCDVLDAL 72 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHHHSTTCCEEEEECCTTCHH
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHHhcCCceEEEEeCCCCCHH
Confidence 34455676675 58999999999999999 99999 9998877665431 000011122444443 345
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.+..+++++...+.+=.++|+..+
T Consensus 73 ~v~~~~~~~~~~~g~id~lvnnAg 96 (265)
T 3lf2_A 73 QVRAFAEACERTLGCASILVNNAG 96 (265)
T ss_dssp HHHHHHHHHHHHHCSCSEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCC
Confidence 577777776655444457787643
No 432
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=95.72 E-value=0.0089 Score=52.05 Aligned_cols=93 Identities=12% Similarity=0.086 Sum_probs=55.2
Q ss_pred CeEEEEcc-cHHHHHHHH-HHHhCCCCCCCcEEEEeCCCHHH-HHHHHHcCceeccC-chhhccCCCEEEEeeCcccHHH
Q 024016 11 FILGFIGA-GKMAESIAK-GVAKSGVLPPDRICTAVHSNLKR-RDAFESIGVKVLSD-NNAVVEYSDVVVFSVKPQVVKD 86 (274)
Q Consensus 11 ~~IgiIG~-G~mG~~~a~-~L~~~g~~~~~~v~v~~~r~~~~-~~~l~~~g~~~~~~-~~~~~~~aDiIil~v~~~~~~~ 86 (274)
|||||||+ |..|.-|.+ -|.++.+ +..++.....|+.-+ ...+......+... ..+..+++|+||+|+|.....+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~-~~~~l~~~ss~~aG~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~ 79 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDF-DLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQGGSYTEK 79 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGG-GGSEEEEEESSSTTSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSCHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCC-CceEEEEEeccccCcCHHHhCCCceEEEecCChhHhccCCEEEECCChHHHHH
Confidence 58999986 999999999 5554442 122554441443211 11121111222111 1233578999999999888777
Q ss_pred HHHHhccccCCC--CEEEEecCC
Q 024016 87 VAMQIRPLLSRK--KLLVSVAAG 107 (274)
Q Consensus 87 v~~~i~~~l~~~--~~vis~~~g 107 (274)
....+.. .| +.||+.++.
T Consensus 80 ~~~~~~~---~G~k~~VID~ss~ 99 (370)
T 3pzr_A 80 VYPALRQ---AGWKGYWIDAAST 99 (370)
T ss_dssp HHHHHHH---TTCCCEEEECSST
T ss_pred HHHHHHH---CCCCEEEEeCCch
Confidence 7766543 34 488988664
No 433
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=95.72 E-value=0.0095 Score=52.00 Aligned_cols=95 Identities=14% Similarity=0.143 Sum_probs=56.3
Q ss_pred CCCeEEEEcc-cHHHHHHHH-HHHhCCCCCCCcEEEEeCCCHH-HHHHHHHcCceecc-CchhhccCCCEEEEeeCcccH
Q 024016 9 ESFILGFIGA-GKMAESIAK-GVAKSGVLPPDRICTAVHSNLK-RRDAFESIGVKVLS-DNNAVVEYSDVVVFSVKPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~-~L~~~g~~~~~~v~v~~~r~~~-~~~~l~~~g~~~~~-~~~~~~~~aDiIil~v~~~~~ 84 (274)
..+||||||+ |..|.-|.+ -|.++.+ +..++..+..++.- +...+......+.. +..+..+++|+||+|+|....
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~-~~~~l~~~ss~~aG~~~~~~~~~~~~v~~~~~~~~~~~vDvvf~a~~~~~s 81 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDF-DLIEPVFFSTSNAGGKAPSFAKNETTLKDATSIDDLKKCDVIITCQGGDYT 81 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGG-GGSEEEEEESSCTTSBCCTTCCSCCBCEETTCHHHHHTCSEEEECSCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCC-CceEEEEEechhcCCCHHHcCCCceEEEeCCChhHhcCCCEEEECCChHHH
Confidence 3579999986 999999999 5554442 12245444144321 11112211122211 112335789999999998888
Q ss_pred HHHHHHhccccCCC--CEEEEecCC
Q 024016 85 KDVAMQIRPLLSRK--KLLVSVAAG 107 (274)
Q Consensus 85 ~~v~~~i~~~l~~~--~~vis~~~g 107 (274)
.+....+.. .| +.||+.++.
T Consensus 82 ~~~~~~~~~---~G~k~~VID~ss~ 103 (377)
T 3uw3_A 82 NDVFPKLRA---AGWNGYWIDAASS 103 (377)
T ss_dssp HHHHHHHHH---TTCCSEEEECSST
T ss_pred HHHHHHHHH---CCCCEEEEeCCcc
Confidence 877776543 44 488988664
No 434
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.71 E-value=0.018 Score=45.14 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=38.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV 59 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~ 59 (274)
..++|.|+| +|.+|..+++.+...|. +|++. +|++++.+.+.+.|.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~----~V~~~-~~~~~~~~~~~~~g~ 84 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGA----RIYTT-AGSDAKREMLSRLGV 84 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTC----EEEEE-ESSHHHHHHHHTTCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCC----EEEEE-eCCHHHHHHHHHcCC
Confidence 346899999 69999999999999998 99999 999888777665553
No 435
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=95.71 E-value=0.05 Score=46.92 Aligned_cols=79 Identities=19% Similarity=0.262 Sum_probs=53.0
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhC-CCCCCCcEEEE-eCCCHHHHHHHHH-cCceec-----cCc--------------h
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKS-GVLPPDRICTA-VHSNLKRRDAFES-IGVKVL-----SDN--------------N 66 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~-g~~~~~~v~v~-~~r~~~~~~~l~~-~g~~~~-----~~~--------------~ 66 (274)
.+||+|+| +|.+|..-..-+.++ .+ +|... +++|.+.+.+..+ ++...+ .+. .
T Consensus 3 ~k~i~ILGsTGSIG~~tldVi~~~~~~----~vvaL~a~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~l~ 78 (376)
T 3a06_A 3 ERTLVILGATGSIGTQTLDVLKKVKGI----RLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHSIE 78 (376)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSCSE----EEEEEEESSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTHHH
T ss_pred cceEEEECCCCHHHHHHHHHHHhCCCe----EEEEEEccCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHHHH
Confidence 46899999 699999988777765 34 66543 4899888766654 454322 121 2
Q ss_pred hhc--cCCCEEEEeeCcc-cHHHHHHHhc
Q 024016 67 AVV--EYSDVVVFSVKPQ-VVKDVAMQIR 92 (274)
Q Consensus 67 ~~~--~~aDiIil~v~~~-~~~~v~~~i~ 92 (274)
+++ .++|+|+.+++.. .+...+..+.
T Consensus 79 el~~~~~~D~Vv~AivG~aGL~ptlaAi~ 107 (376)
T 3a06_A 79 EMLEALKPDITMVAVSGFSGLRAVLASLE 107 (376)
T ss_dssp HHHHHHCCSEEEECCCSTTHHHHHHHHHH
T ss_pred HHhcCCCCCEEEEEeeCHHHHHHHHHHHH
Confidence 333 3699999999754 4666666553
No 436
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=95.70 E-value=0.056 Score=44.54 Aligned_cols=83 Identities=18% Similarity=0.207 Sum_probs=54.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHHH
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~~ 86 (274)
+++-|.| .|-+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+ ....++.++.. .++.++.
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~Dv~~~~~v~~ 87 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGA----RLVLS-GRDVSELDAARRA-------LGE-QFGTDVHTVAIDLAEPDAPAE 87 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH-HHCCCEEEEECCTTSTTHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHH-hcCCcEEEEEecCCCHHHHHH
Confidence 4555555 58999999999999999 99999 9998877665431 000 01233444443 3556777
Q ss_pred HHHHhccccCCCCEEEEecC
Q 024016 87 VAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~ 106 (274)
+++++...+.+=.++|+..+
T Consensus 88 ~~~~~~~~~g~id~lv~nAg 107 (266)
T 4egf_A 88 LARRAAEAFGGLDVLVNNAG 107 (266)
T ss_dssp HHHHHHHHHTSCSEEEEECC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 77777655544457787644
No 437
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.70 E-value=0.0036 Score=53.44 Aligned_cols=71 Identities=14% Similarity=0.174 Sum_probs=48.5
Q ss_pred CCCCCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH--cCceec----cC---chhhcc--C
Q 024016 4 FPIPAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES--IGVKVL----SD---NNAVVE--Y 71 (274)
Q Consensus 4 ~~~~~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~--~g~~~~----~~---~~~~~~--~ 71 (274)
-|..++.|+|.|.|+ |.+|+++++.|++.|+ +|++. +|++.....+.+ .++... .+ ..++++ +
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~ 88 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGH----EILVI-DNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFK 88 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTC----EEEEE-ECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcC
Confidence 355667789999987 9999999999999999 99999 886533211111 122211 12 234555 8
Q ss_pred CCEEEEee
Q 024016 72 SDVVVFSV 79 (274)
Q Consensus 72 aDiIil~v 79 (274)
+|+||-+.
T Consensus 89 ~D~vih~A 96 (330)
T 2pzm_A 89 PTHVVHSA 96 (330)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999876
No 438
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=95.69 E-value=0.066 Score=44.24 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=54.5
Q ss_pred CCCCCCCCCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee
Q 024016 1 MDAFPIPAESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 1 ~~~~~~~~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v 79 (274)
|.+++. ++.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+.- . .+.++..
T Consensus 1 M~~~~~-l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~~-----------~--~~~~~~~ 61 (270)
T 1yde_A 1 MATGTR-YAGKVVVVTGGGRGIGAGIVRAFVNSGA----RVVIC-DKDESGGRALEQEL-----------P--GAVFILC 61 (270)
T ss_dssp ---CCT-TTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHC-----------T--TEEEEEC
T ss_pred CCCCCC-CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHh-----------c--CCeEEEc
Confidence 544433 3556777775 58999999999999999 99999 99988776654310 0 1222222
Q ss_pred ---CcccHHHHHHHhccccCCCCEEEEecC
Q 024016 80 ---KPQVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 80 ---~~~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++.++.+++++...+.+=.++|+..+
T Consensus 62 Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg 91 (270)
T 1yde_A 62 DVTQEDDVKTLVSETIRRFGRLDCVVNNAG 91 (270)
T ss_dssp CTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 244566777666544433356776643
No 439
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=95.68 E-value=0.067 Score=43.71 Aligned_cols=82 Identities=13% Similarity=0.033 Sum_probs=54.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Cccc
Q 024016 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~ 83 (274)
++.+++-|.|. |.+|.++++.|.+.|+ +|++. +|++++.+.+.+. + ..++.++.. .++.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~-----------~~~~~~~~~D~~~~~~ 65 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA----RVVLA-DVLDEEGAATARE-L-----------GDAARYQHLDVTIEED 65 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHT-T-----------GGGEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-h-----------CCceeEEEecCCCHHH
Confidence 44567878865 9999999999999999 99999 9998877665431 0 112233322 3455
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
++.+++++...+.+=.++|+..+
T Consensus 66 ~~~~~~~~~~~~g~iD~lv~nAg 88 (254)
T 1hdc_A 66 WQRVVAYAREEFGSVDGLVNNAG 88 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 77777766554433356776643
No 440
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=95.67 E-value=0.066 Score=43.69 Aligned_cols=81 Identities=14% Similarity=0.135 Sum_probs=53.8
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---Ccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
++.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+ .+ .++.++.. .++
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~ 65 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGA----KVAFS-DINEAAGQQLAAELG-------------ERSMFVRHDVSSEA 65 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHHC-------------TTEEEECCCTTCHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHcC-------------CceEEEEccCCCHH
Confidence 4556676665 58999999999999999 99999 999887766543 21 12333322 345
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++.+++++...+.+=.++|+..+
T Consensus 66 ~v~~~~~~~~~~~g~id~lv~~Ag 89 (253)
T 1hxh_A 66 DWTLVMAAVQRRLGTLNVLVNNAG 89 (253)
T ss_dssp HHHHHHHHHHHHHCSCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCC
Confidence 567777766544433356777643
No 441
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.66 E-value=0.023 Score=49.29 Aligned_cols=86 Identities=13% Similarity=0.125 Sum_probs=58.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH---HHHHHHHHcCceecc--Cchhhc----cCCCEEEEeeC
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL---KRRDAFESIGVKVLS--DNNAVV----EYSDVVVFSVK 80 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~---~~~~~l~~~g~~~~~--~~~~~~----~~aDiIil~v~ 80 (274)
..+|.|+|+|.+|...++.+...|. +|++. ++++ ++.+.+.+.|+...+ +..+.+ ...|+||-++.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga----~Vi~~-~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g 255 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL----EVWMA-NRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATG 255 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC----EEEEE-ESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC----EEEEE-eCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCC
Confidence 5689999999999999999988998 99999 9988 888777777875432 111111 34788888886
Q ss_pred cc-cH-HHHHHHhccccCCCCEEEEe
Q 024016 81 PQ-VV-KDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 81 ~~-~~-~~v~~~i~~~l~~~~~vis~ 104 (274)
.. .+ ...+.. ++++..++.+
T Consensus 256 ~~~~~~~~~~~~----l~~~G~iv~~ 277 (366)
T 2cdc_A 256 ADVNILGNVIPL----LGRNGVLGLF 277 (366)
T ss_dssp CCTHHHHHHGGG----EEEEEEEEEC
T ss_pred ChHHHHHHHHHH----HhcCCEEEEE
Confidence 43 33 444333 3344455544
No 442
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.65 E-value=0.0096 Score=51.92 Aligned_cols=33 Identities=30% Similarity=0.546 Sum_probs=30.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCH
Q 024016 11 FILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNL 48 (274)
Q Consensus 11 ~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~ 48 (274)
|||.|||+|.-|..+|..|.+.|+ +|+++ +|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~----~v~v~-Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGI----KVTIY-ERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC----EEEEE-CSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC----CEEEE-ecCC
Confidence 799999999999999999999999 99999 8754
No 443
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=95.63 E-value=0.08 Score=43.25 Aligned_cols=80 Identities=20% Similarity=0.274 Sum_probs=54.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---Cccc
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~~ 83 (274)
+.+++-|.|. |.+|.++++.|.+.|+ +|++. +|++++.+++.+ .+ .++.++.+ .++.
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 69 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGA----KVVIV-DRDKAGAERVAGEIG-------------DAALAVAADISKEAD 69 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHHC-------------TTEEEEECCTTSHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHHhC-------------CceEEEEecCCCHHH
Confidence 3456777765 7899999999999999 99999 999988877654 21 12333333 3455
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
++++++++...+.+=.++|+..+
T Consensus 70 ~~~~~~~~~~~~g~id~li~~Ag 92 (261)
T 3n74_A 70 VDAAVEAALSKFGKVDILVNNAG 92 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCc
Confidence 77777766554433357777643
No 444
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.62 E-value=0.087 Score=43.17 Aligned_cols=86 Identities=21% Similarity=0.235 Sum_probs=54.5
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Cccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~ 83 (274)
++.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+. ...++.++.. .++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~~-~~~~~~~~~~D~~~~~~ 71 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA----HIVLV-ARQVDRLHEAARS-------LKEK-FGVRVLEVAVDVATPEG 71 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHHH-HCCCEEEEECCTTSHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHH-------HHHh-cCCceEEEEcCCCCHHH
Confidence 4456777776 59999999999999999 99999 9998876655431 0000 0123344433 2445
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+.++++++...+.+=.++|+..+
T Consensus 72 ~~~~~~~~~~~~g~id~lv~~Ag 94 (263)
T 3ai3_A 72 VDAVVESVRSSFGGADILVNNAG 94 (263)
T ss_dssp HHHHHHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 66777666554433357777643
No 445
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=95.61 E-value=0.035 Score=45.40 Aligned_cols=86 Identities=15% Similarity=0.152 Sum_probs=54.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccC-CCEEEEee---Ccc
Q 024016 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEY-SDVVVFSV---KPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~-aDiIil~v---~~~ 82 (274)
++.+++-|.|. |.+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+.... ..+.++.. .++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dv~~~~ 72 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY----RVVLI-ARSKQNLEKVHDE-------IMRSNKHVQEPIVLPLDITDCT 72 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC----EEEEE-ESCHHHHHHHHHH-------HHHHCTTSCCCEEEECCTTCHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHHhccccCcceEEeccCCCHH
Confidence 34556666654 8999999999999999 99999 9999887765531 0000001 23344443 345
Q ss_pred cHHHHHHHhccccCCCCEEEEec
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~ 105 (274)
.+..+++++...+.+=.++|+..
T Consensus 73 ~v~~~~~~~~~~~g~iD~lvnnA 95 (250)
T 3nyw_A 73 KADTEIKDIHQKYGAVDILVNAA 95 (250)
T ss_dssp HHHHHHHHHHHHHCCEEEEEECC
T ss_pred HHHHHHHHHHHhcCCCCEEEECC
Confidence 56777776655443334677654
No 446
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.60 E-value=0.066 Score=45.85 Aligned_cols=44 Identities=11% Similarity=0.264 Sum_probs=34.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCC--CHHHHHHHHH
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHS--NLKRRDAFES 56 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r--~~~~~~~l~~ 56 (274)
++.||||.|.|++|+..++.+...|. +|...+|+ +.+....+.+
T Consensus 6 ~~~kvgInGFGRIGrlv~R~~~~~~v----eivainDp~~d~~~~a~l~~ 51 (346)
T 3h9e_O 6 RELTVGINGFGRIGRLVLRACMEKGV----KVVAVNDPFIDPEYMVYMFK 51 (346)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC----EEEEEECTTCCHHHHHHHHH
T ss_pred CeeEEEEECCChHHHHHHHHHHhCCC----EEEEEeCCCCChhHhccccc
Confidence 34699999999999999999988886 87775474 5666666654
No 447
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=95.60 E-value=0.08 Score=42.75 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=54.1
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Cccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~ 83 (274)
++.++|-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+. + .+. ...++.++.. .++.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~------~~~-~~~~~~~~~~D~~~~~~ 71 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS----TVIIT-GTSGERAKAVAEE-I------ANK-YGVKAHGVEMNLLSEES 71 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHH-H------HHH-HCCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-eCChHHHHHHHHH-H------Hhh-cCCceEEEEccCCCHHH
Confidence 4456677775 59999999999999999 99999 9998876655431 0 000 0123333332 3455
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
++.+++++...+.+=..||+..+
T Consensus 72 ~~~~~~~~~~~~~~~d~vi~~Ag 94 (248)
T 2pnf_A 72 INKAFEEIYNLVDGIDILVNNAG 94 (248)
T ss_dssp HHHHHHHHHHHSSCCSEEEECCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCC
Confidence 66777766554433356777643
No 448
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=95.59 E-value=0.068 Score=43.88 Aligned_cols=86 Identities=13% Similarity=0.221 Sum_probs=54.0
Q ss_pred CCCCeEEEEcc-cH--HHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Cc
Q 024016 8 AESFILGFIGA-GK--MAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KP 81 (274)
Q Consensus 8 ~~~~~IgiIG~-G~--mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~ 81 (274)
++.+++-|.|+ |. +|.++++.|.+.|+ +|++. +|+.+..+.+.+.- +.....++.++.. .+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~~--------~~~~~~~~~~~~~D~~~~ 71 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA----RLIFT-YAGERLEKSVHELA--------GTLDRNDSIILPCDVTND 71 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC----EEEEE-ESSGGGHHHHHHHH--------HTSSSCCCEEEECCCSSS
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC----EEEEe-cCchHHHHHHHHHH--------HhcCCCCceEEeCCCCCH
Confidence 45567888886 56 99999999999999 99998 88865444433210 0011113333333 35
Q ss_pred ccHHHHHHHhccccCCCCEEEEecC
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+.++++++++...+.+=..+|+..+
T Consensus 72 ~~v~~~~~~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 72 AEIETCFASIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHhCCeeEEEEccc
Confidence 6678888777654433346776643
No 449
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=95.59 E-value=0.054 Score=44.41 Aligned_cols=77 Identities=19% Similarity=0.235 Sum_probs=53.7
Q ss_pred CeEEEE-cccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHHH
Q 024016 11 FILGFI-GAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (274)
Q Consensus 11 ~~IgiI-G~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~~ 86 (274)
++|-|- |.+-+|.++++.|.+.|+ +|.+. +|++++.+++.+.+. ++..+.. .+++++.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga----~V~~~-~~~~~~~~~~~~~~~-------------~~~~~~~Dv~~~~~v~~ 64 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD----KVCFI-DIDEKRSADFAKERP-------------NLFYFHGDVADPLTLKK 64 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHTTCT-------------TEEEEECCTTSHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhcC-------------CEEEEEecCCCHHHHHH
Confidence 345455 568899999999999999 99999 999988777665321 2233322 4566788
Q ss_pred HHHHhccccCCCCEEEEec
Q 024016 87 VAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~ 105 (274)
+++++...+.+=.++|+..
T Consensus 65 ~v~~~~~~~g~iDiLVNNA 83 (247)
T 3ged_A 65 FVEYAMEKLQRIDVLVNNA 83 (247)
T ss_dssp HHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 8877766554445777654
No 450
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.58 E-value=0.011 Score=50.70 Aligned_cols=60 Identities=10% Similarity=0.091 Sum_probs=43.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-------ccCchhhccCCCEEEEee
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-------LSDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-------~~~~~~~~~~aDiIil~v 79 (274)
+.|+|.|.|+ |.+|+.+++.|++.|+ +|++. +|++++ .++.. ..+..++++++|+||-+.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~----~V~~~-~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGR----TVRGF-DLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTC----CEEEE-ESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC----EEEEE-eCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 4578999987 9999999999999999 99999 888654 22221 112345567899999775
No 451
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=95.58 E-value=0.09 Score=42.64 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=51.2
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCE-EEEee---Ccc
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDV-VVFSV---KPQ 82 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDi-Iil~v---~~~ 82 (274)
+.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+ .+ .++ .++.. .++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~ 71 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGA----RLILI-DREAAALDRAAQELG-------------AAVAARIVADVTDAE 71 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHHG-------------GGEEEEEECCTTCHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHhc-------------ccceeEEEEecCCHH
Confidence 445677775 59999999999999999 99999 999887765543 11 122 22222 244
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++++++++.. +.+=..+|+..+
T Consensus 72 ~~~~~~~~~~~-~~~id~li~~Ag 94 (254)
T 2wsb_A 72 AMTAAAAEAEA-VAPVSILVNSAG 94 (254)
T ss_dssp HHHHHHHHHHH-HSCCCEEEECCC
T ss_pred HHHHHHHHHHh-hCCCcEEEECCc
Confidence 56666666554 333356776643
No 452
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=95.57 E-value=0.097 Score=42.55 Aligned_cols=81 Identities=22% Similarity=0.273 Sum_probs=55.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---Ccc
Q 024016 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
++.+++-|.|. |-+|.++++.|.+.|+ +|++. +|++++.+.+.+ .+ .++.++.. .++
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~ 65 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGA----TVIVS-DINAEGAKAAAASIG-------------KKARAIAADISDPG 65 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-CSCHHHHHHHHHHHC-------------TTEEECCCCTTCHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHhC-------------CceEEEEcCCCCHH
Confidence 34567777765 8999999999999999 99999 999988776654 22 12222222 345
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++.+++++...+.+=.++|+..+
T Consensus 66 ~v~~~~~~~~~~~g~id~lv~nAg 89 (247)
T 3rwb_A 66 SVKALFAEIQALTGGIDILVNNAS 89 (247)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHHHCCCCCEEEECCC
Confidence 677777776655444457777643
No 453
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.56 E-value=0.026 Score=48.46 Aligned_cols=87 Identities=13% Similarity=0.141 Sum_probs=60.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhC--CCCCCCcEEEEeCCCHHHHHHHHHcCceeccCch-------hhc--cCCCEEEE
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKS--GVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNN-------AVV--EYSDVVVF 77 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~--g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~-------~~~--~~aDiIil 77 (274)
...+|.|+|+|.+|...++.+... |. +|++. ++++++.+.+.+.|+...-+.. ++. ...|+||-
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid 244 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNI----TIVGI-SRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAID 244 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTC----EEEEE-CSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCC----EEEEE-eCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEE
Confidence 346899999999999988888777 87 89999 9999999888888864221211 111 15799999
Q ss_pred eeCcc-cHHHHHHHhccccCCCCEEEEe
Q 024016 78 SVKPQ-VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 78 ~v~~~-~~~~v~~~i~~~l~~~~~vis~ 104 (274)
|+... .+...++-+ +++..++.+
T Consensus 245 ~~g~~~~~~~~~~~l----~~~G~iv~~ 268 (344)
T 2h6e_A 245 LVGTEETTYNLGKLL----AQEGAIILV 268 (344)
T ss_dssp SSCCHHHHHHHHHHE----EEEEEEEEC
T ss_pred CCCChHHHHHHHHHh----hcCCEEEEe
Confidence 98654 455554433 344455544
No 454
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=95.56 E-value=0.071 Score=42.75 Aligned_cols=40 Identities=10% Similarity=0.145 Sum_probs=34.0
Q ss_pred eEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH
Q 024016 12 ILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES 56 (274)
Q Consensus 12 ~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~ 56 (274)
+|-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~ 43 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGK----ATYLT-GRSESKLSTVTN 43 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTC----CEEEE-ESCHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHH
Confidence 566665 58999999999999999 99999 999988877654
No 455
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=95.55 E-value=0.053 Score=49.54 Aligned_cols=78 Identities=17% Similarity=0.183 Sum_probs=51.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH-------------------HHH----HHHHc--Ccee--c
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLK-------------------RRD----AFESI--GVKV--L 62 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~-------------------~~~----~l~~~--g~~~--~ 62 (274)
..+|.|||+|.+|+.++++|...|. .+++++ |.+.- |++ .+.+. .+.+ .
T Consensus 32 ~~~VlvvG~GGlGseiak~La~aGV---g~itlv-D~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~v~v~~~ 107 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLPGI---GSFTII-DGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFV 107 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTTTC---SEEEEE-CCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTTSBCCEE
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCC---CeEEEE-eCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCCCeEEEe
Confidence 3689999999999999999999997 378888 75431 122 22221 2321 1
Q ss_pred c--------CchhhccCCCEEEEeeCcccHHHHHHHh
Q 024016 63 S--------DNNAVVEYSDVVVFSVKPQVVKDVAMQI 91 (274)
Q Consensus 63 ~--------~~~~~~~~aDiIil~v~~~~~~~v~~~i 91 (274)
. +..+.+.++|+||.|+.....+..+.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~ 144 (531)
T 1tt5_A 108 EESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADV 144 (531)
T ss_dssp SSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHH
T ss_pred CCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHH
Confidence 1 2335677899999998665555555443
No 456
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.55 E-value=0.025 Score=47.11 Aligned_cols=82 Identities=17% Similarity=0.088 Sum_probs=53.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHHH
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~~ 86 (274)
+++-|.| .|-+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+ ...++.++.. .++.+++
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~d~~~v~~ 90 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGI----AVYGC-ARDAKNVSAAVDG-------LRA--AGHDVDGSSCDVTSTDEVHA 90 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHT--TTCCEEEEECCTTCHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHh--cCCcEEEEECCCCCHHHHHH
Confidence 4455555 58999999999999999 99999 9998877665431 000 1234444444 3445777
Q ss_pred HHHHhccccCCCCEEEEecC
Q 024016 87 VAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~ 106 (274)
+++++...+.+=.++|+..+
T Consensus 91 ~~~~~~~~~g~id~lv~nAg 110 (279)
T 3sju_A 91 AVAAAVERFGPIGILVNSAG 110 (279)
T ss_dssp HHHHHHHHHCSCCEEEECCC
T ss_pred HHHHHHHHcCCCcEEEECCC
Confidence 77776554444357777643
No 457
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=95.54 E-value=0.071 Score=43.74 Aligned_cols=86 Identities=14% Similarity=0.130 Sum_probs=54.9
Q ss_pred CCCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Ccc
Q 024016 7 PAESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 7 ~~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
.++.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+. + .+ ...++.++.. .++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~------~~--~~~~~~~~~~D~~~~~ 69 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT----AIALL-DMNREALEKAEAS-V------RE--KGVEARSYVCDVTSEE 69 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-H------HT--TTSCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-H------Hh--cCCcEEEEEecCCCHH
Confidence 34556777775 58999999999999999 99999 9998877655431 0 00 0123333333 345
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.+..+++++...+.+=.++|+..+
T Consensus 70 ~~~~~~~~~~~~~g~id~lv~nAg 93 (262)
T 1zem_A 70 AVIGTVDSVVRDFGKIDFLFNNAG 93 (262)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCC
Confidence 566777766554433357777643
No 458
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=95.53 E-value=0.025 Score=46.42 Aligned_cols=86 Identities=15% Similarity=0.245 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Ccc
Q 024016 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
.++.+++-|.|. |-+|.++++.|.+.|+ +|++. +|++++.+.+.+. +. . ...++.++.. .++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~~---~-----~~~~~~~~~~Dv~~~~ 68 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA----RVVIT-GRTKEKLEEAKLE-IE---Q-----FPGQILTVQMDVRNTD 68 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-HC---C-----STTCEEEEECCTTCHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-HH---h-----cCCcEEEEEccCCCHH
Confidence 455566766664 8999999999999999 99999 9999887766541 00 0 1123444443 345
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++++++++...+.+=.++|+..+
T Consensus 69 ~v~~~~~~~~~~~g~id~lv~nAg 92 (257)
T 3imf_A 69 DIQKMIEQIDEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCC
Confidence 677777776654444457787644
No 459
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=95.52 E-value=0.084 Score=43.25 Aligned_cols=81 Identities=17% Similarity=0.153 Sum_probs=52.6
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccH
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~ 84 (274)
+.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+. + .+ ++.++.. .++.+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~------~~-----~~~~~~~D~~d~~~v 73 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGA----TVAIA-DLDVMAAQAVVAG-L------EN-----GGFAVEVDVTKRASV 73 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHT-C------TT-----CCEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-H------hc-----CCeEEEEeCCCHHHH
Confidence 345777775 58999999999999999 99999 9998877665431 0 00 2222222 24556
Q ss_pred HHHHHHhccccCCCCEEEEecC
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++++++...+.+=.++|+..+
T Consensus 74 ~~~~~~~~~~~g~iD~lv~~Ag 95 (263)
T 3ak4_A 74 DAAMQKAIDALGGFDLLCANAG 95 (263)
T ss_dssp HHHHHHHHHHHTCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 6777666544433356777643
No 460
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.51 E-value=0.024 Score=49.27 Aligned_cols=86 Identities=15% Similarity=0.223 Sum_probs=60.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHH-HcCcee-c--cCc---hhhccCCCEEEEeeCc-
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFE-SIGVKV-L--SDN---NAVVEYSDVVVFSVKP- 81 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~-~~g~~~-~--~~~---~~~~~~aDiIil~v~~- 81 (274)
..+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+. +.|+.. . .+. .+.....|+||-++..
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga----~Vi~~-~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~ 262 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGS----KVTVI-STSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAV 262 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcH
Confidence 4689999999999999999888998 89999 99998888777 577642 1 111 1223467999988864
Q ss_pred ccHHHHHHHhccccCCCCEEEEe
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
..+...++-+. ++..++.+
T Consensus 263 ~~~~~~~~~l~----~~G~iv~~ 281 (366)
T 1yqd_A 263 HPLLPLFGLLK----SHGKLILV 281 (366)
T ss_dssp CCSHHHHHHEE----EEEEEEEC
T ss_pred HHHHHHHHHHh----cCCEEEEE
Confidence 35666655443 33455544
No 461
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.51 E-value=0.038 Score=45.57 Aligned_cols=80 Identities=11% Similarity=0.067 Sum_probs=54.6
Q ss_pred eEEEE--cccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHHH
Q 024016 12 ILGFI--GAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (274)
Q Consensus 12 ~IgiI--G~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~~ 86 (274)
|+.+| |.+-+|.++++.|.+.|. +|.+. +|++++.++..+. ..+ ...++..+.+ .+++++.
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga----~Vvi~-~~~~~~~~~~~~~-------l~~--~g~~~~~~~~Dv~~~~~v~~ 75 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGA----RVILN-DIRATLLAESVDT-------LTR--KGYDAHGVAFDVTDELAIEA 75 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEC-CSCHHHHHHHHHH-------HHH--TTCCEEECCCCTTCHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHh--cCCcEEEEEeeCCCHHHHHH
Confidence 66677 668899999999999999 99999 9999877665430 000 0122232222 4667888
Q ss_pred HHHHhccccCCCCEEEEec
Q 024016 87 VAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~ 105 (274)
+++++...+.+=.++|+..
T Consensus 76 ~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 76 AFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp HHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHCCCCcEEEECC
Confidence 8888776655445778764
No 462
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=95.50 E-value=0.057 Score=44.65 Aligned_cols=82 Identities=18% Similarity=0.185 Sum_probs=54.1
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---Cc
Q 024016 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KP 81 (274)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~ 81 (274)
.++.+++-|.|. |-+|.++++.|.+.|+ +|++. +|++++.+.+.+ .+ .++.++.. .+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~ 69 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA----RVVLA-DLPETDLAGAAASVG-------------RGAVHHVVDLTNE 69 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ECTTSCHHHHHHHHC-------------TTCEEEECCTTCH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-cCCHHHHHHHHHHhC-------------CCeEEEECCCCCH
Confidence 344556666665 8999999999999999 99999 999887766543 21 12222222 34
Q ss_pred ccHHHHHHHhccccCCCCEEEEecC
Q 024016 82 QVVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 82 ~~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+.++++++++...+.+=.++|+..+
T Consensus 70 ~~v~~~~~~~~~~~g~id~lv~nAg 94 (271)
T 3tzq_B 70 VSVRALIDFTIDTFGRLDIVDNNAA 94 (271)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5577777766554444457776643
No 463
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.50 E-value=0.044 Score=45.13 Aligned_cols=86 Identities=10% Similarity=0.129 Sum_probs=57.4
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Ccc
Q 024016 7 PAESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 7 ~~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
.++.+++-|.|. |-+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+ ...++.++.. .++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~--~~~~~~~~~~Dv~~~~ 73 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA----DLVLA-ARTVERLEDVAKQ-------VTD--TGRRALSVGTDITDDA 73 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC----EEEEE-eCCHHHHHHHHHH-------HHh--cCCcEEEEEcCCCCHH
Confidence 345566777765 7899999999999999 99999 9998887765531 001 1234444444 345
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.++++++++...+.+=.++|+..+
T Consensus 74 ~v~~~~~~~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 74 QVAHLVDETMKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHHHHHcCCCcEEEECCC
Confidence 577777777655544457787653
No 464
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.47 E-value=0.08 Score=45.93 Aligned_cols=87 Identities=15% Similarity=0.101 Sum_probs=59.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-ccC------chhhc-----cCCCEEEE
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LSD------NNAVV-----EYSDVVVF 77 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-~~~------~~~~~-----~~aDiIil 77 (274)
..+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+++.|+.. .+. ..+.+ ...|+||-
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~-~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid 267 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGA---SRIIGV-GTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVE 267 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC---SEEEEE-CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CeEEEE-CCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEE
Confidence 4689999999999988887777775 258888 99999998888888642 211 11111 15799999
Q ss_pred eeCc-ccHHHHHHHhccccCCC-CEEEEe
Q 024016 78 SVKP-QVVKDVAMQIRPLLSRK-KLLVSV 104 (274)
Q Consensus 78 ~v~~-~~~~~v~~~i~~~l~~~-~~vis~ 104 (274)
|+.. ..+...++ .++++ ..++.+
T Consensus 268 ~~g~~~~~~~~~~----~l~~~~G~iv~~ 292 (373)
T 1p0f_A 268 CAGRIETMMNALQ----STYCGSGVTVVL 292 (373)
T ss_dssp CSCCHHHHHHHHH----TBCTTTCEEEEC
T ss_pred CCCCHHHHHHHHH----HHhcCCCEEEEE
Confidence 9864 44444443 34555 556644
No 465
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=95.45 E-value=0.09 Score=43.26 Aligned_cols=80 Identities=11% Similarity=0.144 Sum_probs=53.8
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---Cccc
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~~ 83 (274)
+.+++-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+ .+ .++.++.. .++.
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~ 66 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGA----SLVAV-DREERLLAEAVAALE-------------AEAIAVVADVSDPKA 66 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHTCC-------------SSEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHhc-------------CceEEEEcCCCCHHH
Confidence 445777775 58999999999999999 99999 999887766553 11 12333333 3455
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
++.+++++...+.+=.++|+..+
T Consensus 67 v~~~~~~~~~~~g~iD~lvnnAg 89 (263)
T 2a4k_A 67 VEAVFAEALEEFGRLHGVAHFAG 89 (263)
T ss_dssp HHHHHHHHHHHHSCCCEEEEGGG
T ss_pred HHHHHHHHHHHcCCCcEEEECCC
Confidence 66777666554433357776643
No 466
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.44 E-value=0.0097 Score=53.15 Aligned_cols=65 Identities=20% Similarity=0.122 Sum_probs=48.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHH--HHHHHHcCceec--cCchhhccCCCEEEEee
Q 024016 9 ESFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKR--RDAFESIGVKVL--SDNNAVVEYSDVVVFSV 79 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~--~~~l~~~g~~~~--~~~~~~~~~aDiIil~v 79 (274)
+.+||.|||.|..|.+.++.|.+.|+ +|+++ |.+... ...+. .|+.+. ....+.++++|.|+++.
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~----~v~~~-D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGV----TPRVM-DTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASP 72 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTC----CCEEE-ESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECT
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCC----EEEEE-ECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCC
Confidence 45789999999999999999999999 99999 765422 13344 677653 22345566899999874
No 467
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.43 E-value=0.094 Score=44.15 Aligned_cols=90 Identities=16% Similarity=0.191 Sum_probs=58.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHh-CCCCCCCcEEEEeCCCHHHHHHHHH----cCc---ee-ccCchhhc-cCCCEEEEe
Q 024016 9 ESFILGFIGAGKMAESIAKGVAK-SGVLPPDRICTAVHSNLKRRDAFES----IGV---KV-LSDNNAVV-EYSDVVVFS 78 (274)
Q Consensus 9 ~~~~IgiIG~G~mG~~~a~~L~~-~g~~~~~~v~v~~~r~~~~~~~l~~----~g~---~~-~~~~~~~~-~~aDiIil~ 78 (274)
...+|..||||..|.+... +.+ .|. +|+.+ |.+++..+..++ .|. ++ ..+..+.- ...|+|+++
T Consensus 122 ~g~rVLDIGcG~G~~ta~~-lA~~~ga----~V~gI-Dis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~ 195 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGIL-LSHVYGM----RVNVV-EIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVA 195 (298)
T ss_dssp TTCEEEEECCCSSCHHHHH-HHHTTCC----EEEEE-ESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEEC
T ss_pred CcCEEEEECCCccHHHHHH-HHHccCC----EEEEE-ECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEEC
Confidence 3469999999986532111 122 355 89999 999987765554 343 22 22322222 468999987
Q ss_pred eCcccHHHHHHHhccccCCCCEEEEe
Q 024016 79 VKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 79 v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
.-......+++++...++||..++..
T Consensus 196 a~~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 196 ALAEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp TTCSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCccCHHHHHHHHHHHcCCCcEEEEE
Confidence 65556678888888888888777743
No 468
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=95.43 E-value=0.035 Score=45.26 Aligned_cols=78 Identities=19% Similarity=0.235 Sum_probs=52.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHHH
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~~ 86 (274)
+++-|.| .|-+|.++++.|.+.|+ +|++. +|++++.+++.+..- ++.++.. .++.+++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~Dv~~~~~v~~ 64 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGD----KVCFI-DIDEKRSADFAKERP-------------NLFYFHGDVADPLTLKK 64 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHTTCT-------------TEEEEECCTTSHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHhcc-------------cCCeEEeeCCCHHHHHH
Confidence 4566665 58999999999999999 99999 999988776654210 1112222 3456777
Q ss_pred HHHHhccccCCCCEEEEecC
Q 024016 87 VAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~ 106 (274)
+++++...+.+=.++|+..+
T Consensus 65 ~~~~~~~~~g~id~lv~nAg 84 (247)
T 3dii_A 65 FVEYAMEKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 77776655444357777643
No 469
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=95.43 E-value=0.047 Score=45.96 Aligned_cols=83 Identities=13% Similarity=0.041 Sum_probs=54.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHH
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVK 85 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~ 85 (274)
.++|-|.|+ |.+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+ ...++.++.+ .++.+.
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~d~~~v~ 96 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGA----RLVLS-DVDQPALEQAVNG-------LRG--QGFDAHGVVCDVRHLDEMV 96 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-------HHh--cCCceEEEEccCCCHHHHH
Confidence 456777765 8899999999999999 99999 9999887665431 000 1234444443 244567
Q ss_pred HHHHHhccccCCCCEEEEecC
Q 024016 86 DVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~ 106 (274)
++++++...+.+=.++|+..+
T Consensus 97 ~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 97 RLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHHHhCCCCCEEEECCC
Confidence 777766554433357777644
No 470
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.42 E-value=0.096 Score=45.42 Aligned_cols=87 Identities=15% Similarity=0.135 Sum_probs=59.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-ccC------chhhc-----cCCCEEEE
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LSD------NNAVV-----EYSDVVVF 77 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-~~~------~~~~~-----~~aDiIil 77 (274)
..+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+++.|+.. .+. ..+.+ ...|+||-
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga---~~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 267 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGA---ARIIGV-DINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 267 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CeEEEE-cCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEE
Confidence 4689999999999999888877885 258888 99999998888888642 211 11111 15799999
Q ss_pred eeCc-ccHHHHHHHhccccCCC-CEEEEe
Q 024016 78 SVKP-QVVKDVAMQIRPLLSRK-KLLVSV 104 (274)
Q Consensus 78 ~v~~-~~~~~v~~~i~~~l~~~-~~vis~ 104 (274)
|+.. ..+...++- ++++ ..++.+
T Consensus 268 ~~g~~~~~~~~~~~----l~~~~G~iv~~ 292 (374)
T 2jhf_A 268 VIGRLDTMVTALSC----CQEAYGVSVIV 292 (374)
T ss_dssp CSCCHHHHHHHHHH----BCTTTCEEEEC
T ss_pred CCCCHHHHHHHHHH----hhcCCcEEEEe
Confidence 9864 444444443 4455 456644
No 471
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.41 E-value=0.099 Score=45.39 Aligned_cols=87 Identities=17% Similarity=0.100 Sum_probs=58.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-ccC------chhhc-----cCCCEEEE
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LSD------NNAVV-----EYSDVVVF 77 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-~~~------~~~~~-----~~aDiIil 77 (274)
..+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+.+.|+.. .+. ..+.+ ...|+||-
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga---~~Vi~~-~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid 271 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGA---SRIIAI-DINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLD 271 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CeEEEE-cCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEE
Confidence 4689999999999998888777775 258888 99999998888888642 211 11111 15799999
Q ss_pred eeCc-ccHHHHHHHhccccCCC-CEEEEe
Q 024016 78 SVKP-QVVKDVAMQIRPLLSRK-KLLVSV 104 (274)
Q Consensus 78 ~v~~-~~~~~v~~~i~~~l~~~-~~vis~ 104 (274)
|+.. ..+...++ .++++ ..++.+
T Consensus 272 ~~G~~~~~~~~~~----~l~~~~G~iv~~ 296 (376)
T 1e3i_A 272 CAGTAQTLKAAVD----CTVLGWGSCTVV 296 (376)
T ss_dssp SSCCHHHHHHHHH----TBCTTTCEEEEC
T ss_pred CCCCHHHHHHHHH----HhhcCCCEEEEE
Confidence 8864 34444443 34555 455544
No 472
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=95.41 E-value=0.11 Score=43.52 Aligned_cols=90 Identities=13% Similarity=0.202 Sum_probs=55.9
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC---ccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQV 83 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~---~~~ 83 (274)
++.++|.|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+. +. ..... ....++.++... ++.
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-l~--~~~~~-~~~~~~~~~~~D~~~~~~ 86 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGS----NVVIA-SRKLERLKSAADE-LQ--ANLPP-TKQARVIPIQCNIRNEEE 86 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-HH--HTSCT-TCCCCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-HH--hhccc-cCCccEEEEecCCCCHHH
Confidence 3446777775 59999999999999999 99999 9998876655431 00 00000 012345554443 445
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+..+++++...+.+=.+||++.+
T Consensus 87 v~~~~~~~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 87 VNNLVKSTLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 67777766554433357787654
No 473
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=95.40 E-value=0.011 Score=50.43 Aligned_cols=64 Identities=14% Similarity=0.122 Sum_probs=45.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhC-CCCCCCcEEEEeCCCHHHHHHHHH-cCceec----cC----chhhccCCCEEEEee
Q 024016 11 FILGFIGA-GKMAESIAKGVAKS-GVLPPDRICTAVHSNLKRRDAFES-IGVKVL----SD----NNAVVEYSDVVVFSV 79 (274)
Q Consensus 11 ~~IgiIG~-G~mG~~~a~~L~~~-g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~----~~----~~~~~~~aDiIil~v 79 (274)
|||.|.|+ |.+|+.+++.|++. |+ +|++. +|++++.+.+.. .++... .+ ..++++++|+||-+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A 75 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY----EVYGL-DIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV 75 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC----EEEEE-ESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC----EEEEE-eCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence 58999987 99999999999998 88 99999 888776554432 233321 11 123456789999764
No 474
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.40 E-value=0.015 Score=48.83 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=43.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cC-----chhhccCCCEEEEee
Q 024016 11 FILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD-----NNAVVEYSDVVVFSV 79 (274)
Q Consensus 11 ~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~-----~~~~~~~aDiIil~v 79 (274)
|||.|.|+ |.+|+++++.|++.|+ +|++. +|+++........++... .| ..+.++. |+||-+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A 70 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY----EVVVV-DNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-CCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC----EEEEE-eCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECC
Confidence 58999987 9999999999999999 99999 887655433322333221 11 2233444 9998775
No 475
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=95.39 E-value=0.079 Score=43.24 Aligned_cols=93 Identities=12% Similarity=0.156 Sum_probs=55.2
Q ss_pred CCCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEeeC---cc
Q 024016 7 PAESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSVK---PQ 82 (274)
Q Consensus 7 ~~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v~---~~ 82 (274)
.++.++|-|.| .|.+|.++++.|++.|+ +|++. +|++++.+.+.+. +.... ..+.....++.++... ++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~D~~~~~ 76 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGA----TVAAC-DLDRAAAQETVRL-LGGPG-SKEGPPRGNHAAFQADVSEAR 76 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHT-C-------------CCEEEECCTTSHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC----EEEEE-eCChHHHHHHHHH-HHhcC-ccccccCcceEEEEecCCCHH
Confidence 34556787785 59999999999999999 99999 9998877665541 10000 0000111234444432 34
Q ss_pred cHHHHHHHhccccCCC-CEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRK-KLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~-~~vis~~~ 106 (274)
.+.++++++...+.+= .+||+..+
T Consensus 77 ~~~~~~~~~~~~~g~i~d~vi~~Ag 101 (264)
T 2pd6_A 77 AARCLLEQVQACFSRPPSVVVSCAG 101 (264)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCC
Confidence 5667776665444332 46787644
No 476
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=95.39 E-value=0.086 Score=43.61 Aligned_cols=86 Identities=9% Similarity=0.196 Sum_probs=53.0
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccH
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~ 84 (274)
+.++|.|.| .|.+|.++++.|++.|+ +|++. +|++++.+.+.+. + .+.-....+.++.. .++.+
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~------~~~~~~~~~~~~~~Dl~~~~~v 98 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL----KVVGC-ARTVGNIEELAAE-C------KSAGYPGTLIPYRCDLSNEEDI 98 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-H------HHTTCSSEEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-ECChHHHHHHHHH-H------HhcCCCceEEEEEecCCCHHHH
Confidence 345677775 59999999999999999 99999 9998877655431 0 00000112333332 24456
Q ss_pred HHHHHHhccccCCCCEEEEecC
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~ 106 (274)
..+++++...+.+=.+||+..+
T Consensus 99 ~~~~~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 99 LSMFSAIRSQHSGVDICINNAG 120 (279)
T ss_dssp HHHHHHHHHHHCCCSEEEECCC
T ss_pred HHHHHHHHHhCCCCCEEEECCC
Confidence 6777666544433346776643
No 477
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=95.38 E-value=0.056 Score=44.64 Aligned_cols=85 Identities=15% Similarity=0.103 Sum_probs=54.6
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Cccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~ 83 (274)
++.++|-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+ ...++.++.. .++.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dl~~~~~ 94 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS----KLVLW-DINKHGLEETAAK-------CKG--LGAKVHTFVVDCSNRED 94 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-EcCHHHHHHHHHH-------HHh--cCCeEEEEEeeCCCHHH
Confidence 3446787775 58999999999999999 99999 9998776654431 000 0123333333 2445
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+.++++++...+.+=..||++.+
T Consensus 95 v~~~~~~~~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 95 IYSSAKKVKAEIGDVSILVNNAG 117 (272)
T ss_dssp HHHHHHHHHHHTCCCSEEEECCC
T ss_pred HHHHHHHHHHHCCCCcEEEECCC
Confidence 67777766554434357777643
No 478
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=95.38 E-value=0.067 Score=44.45 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=52.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---CcccHH
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQVVK 85 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~~~~ 85 (274)
+++-|.| .|-+|.++++.|.+.|+ +|++. +|++++.+.+.+ .+ .++.++.+ .++.++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~----~V~~~-~r~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~~v~ 91 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGC----HVLCA-DIDGDAADAAATKIG-------------CGAAACRVDVSDEQQII 91 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHHHC-------------SSCEEEECCTTCHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHcC-------------CcceEEEecCCCHHHHH
Confidence 4555555 58999999999999999 99999 999888776654 21 12223332 345567
Q ss_pred HHHHHhccccCCCCEEEEecC
Q 024016 86 DVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~ 106 (274)
.+++++...+.+=.++|+..+
T Consensus 92 ~~~~~~~~~~g~iD~lvnnAg 112 (277)
T 3gvc_A 92 AMVDACVAAFGGVDKLVANAG 112 (277)
T ss_dssp HHHHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCC
Confidence 777766554433357776643
No 479
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=95.37 E-value=0.067 Score=44.52 Aligned_cols=76 Identities=17% Similarity=0.167 Sum_probs=52.5
Q ss_pred eEEEE--cccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---CcccHH
Q 024016 12 ILGFI--GAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQVVK 85 (274)
Q Consensus 12 ~IgiI--G~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~~~~ 85 (274)
|+++| |.+-+|.++++.|.+.|. +|.+. +|++++++++.+ .|. +.+.+.. .+++++
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga----~V~i~-~r~~~~l~~~~~~~g~-------------~~~~~~~Dv~~~~~v~ 91 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGA----RVFIT-GRRKDVLDAAIAEIGG-------------GAVGIQADSANLAELD 91 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHHCT-------------TCEEEECCTTCHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHHcCC-------------CeEEEEecCCCHHHHH
Confidence 67777 557899999999999999 99999 999988876654 221 1222222 456678
Q ss_pred HHHHHhccccCCCCEEEEec
Q 024016 86 DVAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~ 105 (274)
.+++++...+.+=.++|...
T Consensus 92 ~~~~~~~~~~G~iDiLVNNA 111 (273)
T 4fgs_A 92 RLYEKVKAEAGRIDVLFVNA 111 (273)
T ss_dssp HHHHHHHHHHSCEEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 88877765553334566553
No 480
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.37 E-value=0.024 Score=47.75 Aligned_cols=85 Identities=16% Similarity=0.115 Sum_probs=59.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCc---h---hhccCCCEEEEeeCcc
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDN---N---AVVEYSDVVVFSVKPQ 82 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~---~---~~~~~aDiIil~v~~~ 82 (274)
..+|.|+|+ |.+|...++.+...|. +|++. ++++++.+.+.+.|+...-+. . +.+...|+||- +...
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga----~Vi~~-~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~~ 199 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGL----RVLAA-ASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRGK 199 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTC----EEEEE-ESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCHH
Confidence 468999998 9999999998888998 99999 999999888877776421111 1 22356888888 7655
Q ss_pred cHHHHHHHhccccCCCCEEEEe
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~ 104 (274)
.+...++. ++++..++.+
T Consensus 200 ~~~~~~~~----l~~~G~~v~~ 217 (302)
T 1iz0_A 200 EVEESLGL----LAHGGRLVYI 217 (302)
T ss_dssp THHHHHTT----EEEEEEEEEC
T ss_pred HHHHHHHh----hccCCEEEEE
Confidence 45444433 3344455543
No 481
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=95.36 E-value=0.021 Score=48.64 Aligned_cols=66 Identities=8% Similarity=0.097 Sum_probs=44.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHH---HHHHHc-----Cceec-------cCchhhccCC
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRR---DAFESI-----GVKVL-------SDNNAVVEYS 72 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~---~~l~~~-----g~~~~-------~~~~~~~~~a 72 (274)
++++|.|.| +|-+|+++++.|++.|+ +|++. .|+++.. ..+.+. ++... .+..++++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGY----TVRAT-VRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGC 78 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-ESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTC
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC----EEEEE-ECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCC
Confidence 346898888 79999999999999999 99988 7776532 222111 12211 1234566789
Q ss_pred CEEEEee
Q 024016 73 DVVVFSV 79 (274)
Q Consensus 73 DiIil~v 79 (274)
|+||-+.
T Consensus 79 d~Vih~A 85 (337)
T 2c29_D 79 TGVFHVA 85 (337)
T ss_dssp SEEEECC
T ss_pred CEEEEec
Confidence 9988654
No 482
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=95.36 E-value=0.12 Score=42.05 Aligned_cols=86 Identities=15% Similarity=0.121 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhc-cCCCEEEEe---eCccc
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVV-EYSDVVVFS---VKPQV 83 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~-~~aDiIil~---v~~~~ 83 (274)
+.+++-|.|. |.+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+.- .++..+..- ..++.
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~ 78 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGA----TVILL-GRNEEKLRQVASH-------INEETGRQPQWFILDLLTCTSEN 78 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHHHHSCCCEEEECCTTTCCHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHhhcCCCceEEEEecccCCHHH
Confidence 4456666655 8999999999999999 99999 9999887665431 00000 011111111 12445
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
++++++++...+.+=.++|+..+
T Consensus 79 ~~~~~~~~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 79 CQQLAQRIAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHHHHHHHHCSCCSEEEECCC
T ss_pred HHHHHHHHHHhCCCCCEEEECCc
Confidence 67777776655444457777643
No 483
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.36 E-value=0.028 Score=48.87 Aligned_cols=86 Identities=17% Similarity=0.266 Sum_probs=60.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-cc-Cc----hhhccCCCEEEEeeCcc-
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LS-DN----NAVVEYSDVVVFSVKPQ- 82 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-~~-~~----~~~~~~aDiIil~v~~~- 82 (274)
..+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+.+.|+.. .+ +. .++....|+||-|+...
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga----~Vi~~-~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~ 269 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGA----HVVAF-TTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPH 269 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC----EEEEE-ESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHH
Confidence 4689999999999999988888898 89999 99999988888888642 21 11 12224679999998643
Q ss_pred cHHHHHHHhccccCCCCEEEEe
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~ 104 (274)
.+...++-+ +++..++.+
T Consensus 270 ~~~~~~~~l----~~~G~iv~~ 287 (369)
T 1uuf_A 270 NLDDFTTLL----KRDGTMTLV 287 (369)
T ss_dssp CHHHHHTTE----EEEEEEEEC
T ss_pred HHHHHHHHh----ccCCEEEEe
Confidence 555555433 344455544
No 484
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=95.35 E-value=0.15 Score=42.59 Aligned_cols=86 Identities=10% Similarity=0.154 Sum_probs=54.8
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Cccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~ 83 (274)
++.++|.|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+. ...++.++.. .++.
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~~-~~~~~~~~~~Dl~~~~~ 90 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGA----QCVIA-SRKMDVLKATAEQ-------ISSQ-TGNKVHAIQCDVRDPDM 90 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHHH-HSSCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHHh-cCCceEEEEeCCCCHHH
Confidence 3446777776 58999999999999999 99999 9998776654431 0000 0123444433 3455
Q ss_pred HHHHHHHhccccCCCCEEEEecC
Q 024016 84 VKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+..+++++...+.+=.++|+..+
T Consensus 91 ~~~~~~~~~~~~g~id~li~~Ag 113 (302)
T 1w6u_A 91 VQNTVSELIKVAGHPNIVINNAA 113 (302)
T ss_dssp HHHHHHHHHHHTCSCSEEEECCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCC
Confidence 77777766544433357777654
No 485
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.35 E-value=0.057 Score=46.79 Aligned_cols=86 Identities=12% Similarity=0.157 Sum_probs=58.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHh-CCCCCCCcEEEEeCCCHHHHHHHHHcCceec-cC---chhhc-----cCCCEEEEe
Q 024016 10 SFILGFIG-AGKMAESIAKGVAK-SGVLPPDRICTAVHSNLKRRDAFESIGVKVL-SD---NNAVV-----EYSDVVVFS 78 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~-~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~~---~~~~~-----~~aDiIil~ 78 (274)
..+|.|+| +|.+|...++.+.. .|. +|++. ++++++.+.+.+.|+... +. ..+.+ ...|+||-|
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~----~Vi~~-~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~ 246 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDL----TVIAT-ASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFST 246 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCS----EEEEE-CSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCC----EEEEE-eCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEEC
Confidence 45799998 99999987776655 476 89999 999999988888886422 11 11111 257899988
Q ss_pred eCcc-cHHHHHHHhccccCCCCEEEEe
Q 024016 79 VKPQ-VVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 79 v~~~-~~~~v~~~i~~~l~~~~~vis~ 104 (274)
+... .+...++- ++++..++.+
T Consensus 247 ~g~~~~~~~~~~~----l~~~G~iv~~ 269 (363)
T 4dvj_A 247 THTDKHAAEIADL----IAPQGRFCLI 269 (363)
T ss_dssp SCHHHHHHHHHHH----SCTTCEEEEC
T ss_pred CCchhhHHHHHHH----hcCCCEEEEE
Confidence 8643 44444433 4555566655
No 486
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.34 E-value=0.11 Score=44.98 Aligned_cols=87 Identities=16% Similarity=0.163 Sum_probs=58.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCcee-ccC------chhhc-----cCCCEEEE
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKV-LSD------NNAVV-----EYSDVVVF 77 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~-~~~------~~~~~-----~~aDiIil 77 (274)
..+|.|+|+|.+|...++.+...|. .+|++. ++++++.+.+++.|+.. .+. ..+.+ ...|+||-
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga---~~Vi~~-~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid 268 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGA---KRIIAV-DLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLE 268 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---SEEEEE-CSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---CEEEEE-cCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEE
Confidence 4689999999999999888877785 258888 99999998888888642 211 11111 15799999
Q ss_pred eeCc-ccHHHHHHHhccccCCC-CEEEEe
Q 024016 78 SVKP-QVVKDVAMQIRPLLSRK-KLLVSV 104 (274)
Q Consensus 78 ~v~~-~~~~~v~~~i~~~l~~~-~~vis~ 104 (274)
++.. ..+...++ .++++ ..++.+
T Consensus 269 ~~g~~~~~~~~~~----~l~~~~G~iv~~ 293 (374)
T 1cdo_A 269 CVGNVGVMRNALE----SCLKGWGVSVLV 293 (374)
T ss_dssp CSCCHHHHHHHHH----TBCTTTCEEEEC
T ss_pred CCCCHHHHHHHHH----HhhcCCcEEEEE
Confidence 8864 34444433 34555 555644
No 487
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.34 E-value=0.077 Score=43.65 Aligned_cols=80 Identities=15% Similarity=0.092 Sum_probs=54.9
Q ss_pred eEEEE--cccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHHH
Q 024016 12 ILGFI--GAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (274)
Q Consensus 12 ~IgiI--G~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~~ 86 (274)
|+.+| |.+-+|.++++.|.+.|. +|.++ +|++++++++.+. ..+ ...+++.+.. .+++++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga----~Vv~~-~~~~~~~~~~~~~-------i~~--~g~~~~~~~~Dvt~~~~v~~ 73 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDS----IVVAV-ELLEDRLNQIVQE-------LRG--MGKEVLGVKADVSKKKDVEE 73 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTSHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCC----EEEEE-ECCHHHHHHHHHH-------HHh--cCCcEEEEEccCCCHHHHHH
Confidence 55566 557899999999999999 99999 9999887766541 001 1223444433 4567888
Q ss_pred HHHHhccccCCCCEEEEec
Q 024016 87 VAMQIRPLLSRKKLLVSVA 105 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~ 105 (274)
+++++...+.+=.++|+..
T Consensus 74 ~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 74 FVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 8888776655445788754
No 488
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=95.33 E-value=0.045 Score=45.30 Aligned_cols=84 Identities=11% Similarity=0.073 Sum_probs=52.4
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccH
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVV 84 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~ 84 (274)
+.+++-|.| .|-+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+. ..++.++.+ .++.+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~----~V~~~-~r~~~~~~~~~~~-------~~~~--~~~~~~~~~Dv~d~~~v 92 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGA----MVIGT-ATTEAGAEGIGAA-------FKQA--GLEGRGAVLNVNDATAV 92 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHH-------HHHH--TCCCEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHhc--CCcEEEEEEeCCCHHHH
Confidence 344455554 58999999999999999 99999 9998877665431 0000 112222222 34567
Q ss_pred HHHHHHhccccCCCCEEEEecC
Q 024016 85 KDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 85 ~~v~~~i~~~l~~~~~vis~~~ 106 (274)
+.+++++...+.+=.++|+..+
T Consensus 93 ~~~~~~~~~~~g~iD~lvnnAg 114 (270)
T 3ftp_A 93 DALVESTLKEFGALNVLVNNAG 114 (270)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 7777776554444357777643
No 489
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.32 E-value=0.1 Score=42.90 Aligned_cols=84 Identities=13% Similarity=0.094 Sum_probs=54.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHH
Q 024016 10 SFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVK 85 (274)
Q Consensus 10 ~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~ 85 (274)
.+++-|.| .|-+|.++++.|.+.|+ +|++. +|++++.+.+.+. ..+ ....++.++.. .++.++
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~Dv~~~~~v~ 76 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGA----NVAVA-GRSTADIDACVAD-------LDQ-LGSGKVIGVQTDVSDRAQCD 76 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-------HHT-TSSSCEEEEECCTTSHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHH-------HHh-hCCCcEEEEEcCCCCHHHHH
Confidence 34565555 68999999999999999 99999 9999887665431 000 01124444444 345577
Q ss_pred HHHHHhccccCCCCEEEEecC
Q 024016 86 DVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~ 106 (274)
.+++++...+.+=.++|+..+
T Consensus 77 ~~~~~~~~~~g~id~lvnnAg 97 (262)
T 3pk0_A 77 ALAGRAVEEFGGIDVVCANAG 97 (262)
T ss_dssp HHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEECCC
Confidence 777776554444457777643
No 490
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.31 E-value=0.029 Score=48.06 Aligned_cols=86 Identities=13% Similarity=0.160 Sum_probs=59.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-c----Cchhhc----cCCCEEEEeeC
Q 024016 10 SFILGFIGAGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-S----DNNAVV----EYSDVVVFSVK 80 (274)
Q Consensus 10 ~~~IgiIG~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~----~~~~~~----~~aDiIil~v~ 80 (274)
..+|.|+|+|.+|...++.+...|. +|++. ++++++.+.+.+.|+... + +..+.+ ...|+||.++.
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga----~Vi~~-~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g 241 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMGL----RVAAV-DIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAV 241 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC----eEEEE-eCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCC
Confidence 4689999999999999988888898 99999 999999998888886421 1 111111 25788888875
Q ss_pred -cccHHHHHHHhccccCCCCEEEEe
Q 024016 81 -PQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 81 -~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
++.+...+.-+ +++..++.+
T Consensus 242 ~~~~~~~~~~~l----~~~G~iv~~ 262 (340)
T 3s2e_A 242 SPKAFSQAIGMV----RRGGTIALN 262 (340)
T ss_dssp CHHHHHHHHHHE----EEEEEEEEC
T ss_pred CHHHHHHHHHHh----ccCCEEEEe
Confidence 34444444433 344455544
No 491
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.31 E-value=0.014 Score=50.67 Aligned_cols=67 Identities=13% Similarity=0.154 Sum_probs=46.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCC-CCCCCcEEEEeCCCHHHH-HHHH-HcCceec----cC---chhhccCCCEEEE
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSG-VLPPDRICTAVHSNLKRR-DAFE-SIGVKVL----SD---NNAVVEYSDVVVF 77 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g-~~~~~~v~v~~~r~~~~~-~~l~-~~g~~~~----~~---~~~~~~~aDiIil 77 (274)
++|+|.|.|+ |.+|+.+++.|++.| + +|++. +|++... +.+. ..++... .+ ..++++++|+||-
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~----~V~~~-~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih 105 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVN----QVHVV-DNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFH 105 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCS----EEEEE-CCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCc----eEEEE-ECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEE
Confidence 4578999985 999999999999999 8 99999 8876542 1121 1233221 12 2345678999998
Q ss_pred eeC
Q 024016 78 SVK 80 (274)
Q Consensus 78 ~v~ 80 (274)
+..
T Consensus 106 ~A~ 108 (377)
T 2q1s_A 106 LAT 108 (377)
T ss_dssp CCC
T ss_pred CCC
Confidence 863
No 492
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=95.29 E-value=0.016 Score=49.45 Aligned_cols=66 Identities=14% Similarity=0.119 Sum_probs=45.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHH----HHH---cCceec----cC---chhhcc--C
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDA----FES---IGVKVL----SD---NNAVVE--Y 71 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~----l~~---~g~~~~----~~---~~~~~~--~ 71 (274)
++|+|.|.| +|.+|+++++.|++.|+ +|++. +|++++.+. +.+ .++... .+ ..++++ +
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY----DVVIA-DNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC----EEEEE-CCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC----cEEEE-ecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccC
Confidence 457899997 59999999999999999 99999 887654322 221 133221 12 223444 7
Q ss_pred CCEEEEee
Q 024016 72 SDVVVFSV 79 (274)
Q Consensus 72 aDiIil~v 79 (274)
+|+||-+.
T Consensus 79 ~d~vih~A 86 (341)
T 3enk_A 79 ITAAIHFA 86 (341)
T ss_dssp CCEEEECC
T ss_pred CcEEEECc
Confidence 89999875
No 493
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=95.29 E-value=0.11 Score=41.94 Aligned_cols=83 Identities=11% Similarity=0.105 Sum_probs=54.1
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH-cCceeccCchhhccCCCEEEEee---Ccc
Q 024016 8 AESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES-IGVKVLSDNNAVVEYSDVVVFSV---KPQ 82 (274)
Q Consensus 8 ~~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~-~g~~~~~~~~~~~~~aDiIil~v---~~~ 82 (274)
++.++|-|.| .|.+|.++++.|.+.|+ +|++. +|++++.+.+.+ ... ..++.++.. .++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~ 67 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGA----KVMIT-GRHSDVGEKAAKSVGT-----------PDQIQFFQHDSSDED 67 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHHCC-----------TTTEEEEECCTTCHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHHhhc-----------cCceEEEECCCCCHH
Confidence 4556777775 59999999999999999 99999 999877665543 110 022333333 344
Q ss_pred cHHHHHHHhccccCCCCEEEEecC
Q 024016 83 VVKDVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 83 ~~~~v~~~i~~~l~~~~~vis~~~ 106 (274)
.+.++++++...+.+=..+|+..+
T Consensus 68 ~~~~~~~~~~~~~~~id~li~~Ag 91 (251)
T 1zk4_A 68 GWTKLFDATEKAFGPVSTLVNNAG 91 (251)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCC
Confidence 567777766554433356776643
No 494
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=95.27 E-value=0.064 Score=44.63 Aligned_cols=84 Identities=12% Similarity=0.082 Sum_probs=52.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---Cccc
Q 024016 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQV 83 (274)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~ 83 (274)
++.++|.|.|+ |.+|.++++.|.+.|+ +|++. +|++++.+.+.+. + .+ ....++.++.. .++.
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~----~V~~~-~r~~~~~~~~~~~-~------~~-~~~~~~~~~~~Dl~d~~~ 92 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGA----HVVVT-ARSKETLQKVVSH-C------LE-LGAASAHYIAGTMEDMTF 92 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHH-H------HH-HTCSEEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHH-H------HH-hCCCceEEEeCCCCCHHH
Confidence 44567877876 9999999999999999 99999 9998877665431 0 00 00112333333 2345
Q ss_pred HHHHHHHhccccCCCCEEEEe
Q 024016 84 VKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 84 ~~~v~~~i~~~l~~~~~vis~ 104 (274)
+.++++++...+.+=.++|+.
T Consensus 93 v~~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 93 AEQFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHHHHHHTSCSEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEEC
Confidence 666666654433333467765
No 495
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.27 E-value=0.029 Score=47.78 Aligned_cols=87 Identities=15% Similarity=0.113 Sum_probs=58.8
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceec-c-C---chh----hc--cCCCEEE
Q 024016 9 ESFILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVL-S-D---NNA----VV--EYSDVVV 76 (274)
Q Consensus 9 ~~~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~-~-~---~~~----~~--~~aDiIi 76 (274)
...+|.|+| +|.+|...++.+...|. +|++. ++++++.+.+.+.|.... + + ..+ .. ...|+||
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga----~Vi~~-~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvi 214 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGA----KLIGT-VSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVY 214 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTC----EEEEE-ESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEE
Confidence 346899999 79999999999988998 99999 999999988887775321 1 1 111 11 2478888
Q ss_pred EeeCcccHHHHHHHhccccCCCCEEEEe
Q 024016 77 FSVKPQVVKDVAMQIRPLLSRKKLLVSV 104 (274)
Q Consensus 77 l~v~~~~~~~v~~~i~~~l~~~~~vis~ 104 (274)
-|+....+...+.- ++++..++.+
T Consensus 215 d~~g~~~~~~~~~~----l~~~G~iv~~ 238 (325)
T 3jyn_A 215 DGVGQDTWLTSLDS----VAPRGLVVSF 238 (325)
T ss_dssp ESSCGGGHHHHHTT----EEEEEEEEEC
T ss_pred ECCChHHHHHHHHH----hcCCCEEEEE
Confidence 87766544444433 3344455544
No 496
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=95.26 E-value=0.039 Score=45.57 Aligned_cols=77 Identities=14% Similarity=0.201 Sum_probs=49.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHH
Q 024016 10 SFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVK 85 (274)
Q Consensus 10 ~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~ 85 (274)
.+++-|.|+ |.+|.++++.|.+.|+ +|++. +|++++.+.+... .+.++.+ .++.+.
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~-~r~~~~~~~~~~~---------------~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGH----PLLLL-ARRVERLKALNLP---------------NTLCAQVDVTDKYTFD 75 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC----CEEEE-ESCHHHHHTTCCT---------------TEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHhhcC---------------CceEEEecCCCHHHHH
Confidence 445666654 8999999999999999 99999 9998765432211 2333332 345566
Q ss_pred HHHHHhccccCCCCEEEEecC
Q 024016 86 DVAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 86 ~v~~~i~~~l~~~~~vis~~~ 106 (274)
++++++...+.+=.++|+..+
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg 96 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAG 96 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCC
T ss_pred HHHHHHHHHCCCCCEEEECCC
Confidence 777666544433346776543
No 497
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=95.26 E-value=0.038 Score=44.62 Aligned_cols=44 Identities=11% Similarity=0.128 Sum_probs=37.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHH
Q 024016 8 AESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFES 56 (274)
Q Consensus 8 ~~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~ 56 (274)
++.++|-|.|. |.+|.++++.|.+.|+ +|++. +|++++.+.+.+
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~ 49 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA----KVVAV-TRTNSDLVSLAK 49 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHH
Confidence 45678888876 9999999999999999 99999 999887766554
No 498
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.25 E-value=0.041 Score=46.92 Aligned_cols=46 Identities=13% Similarity=0.167 Sum_probs=39.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCc
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGV 59 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~ 59 (274)
...+|.|+|+ |.+|..+++.+...|. +|++. +|++++.+.+.+.|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~----~V~~~-~~~~~~~~~~~~~g~ 191 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGC----KVVGA-AGSDEKIAYLKQIGF 191 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTC----EEEEE-ESSHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCC----EEEEE-eCCHHHHHHHHhcCC
Confidence 3468999998 9999999999999998 99999 999988887766664
No 499
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=95.24 E-value=0.096 Score=41.96 Aligned_cols=78 Identities=15% Similarity=0.105 Sum_probs=50.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhCCCCCCCcEEEEeCCCHHHHHHHHHcCceeccCchhhccCCCEEEEee---CcccHHH
Q 024016 11 FILGFIG-AGKMAESIAKGVAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAVVEYSDVVVFSV---KPQVVKD 86 (274)
Q Consensus 11 ~~IgiIG-~G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~~~~~l~~~g~~~~~~~~~~~~~aDiIil~v---~~~~~~~ 86 (274)
++|.|.| .|.+|.++++.|++.|+ +|++. +|++++.+.+.+.- . ++.++.. .++.+++
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~----~V~~~-~r~~~~~~~~~~~~-----------~--~~~~~~~D~~~~~~~~~ 67 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGY----RVGLM-ARDEKRLQALAAEL-----------E--GALPLPGDVREEGDWAR 67 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC----EEEEE-ESCHHHHHHHHHHS-----------T--TCEEEECCTTCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEE-ECCHHHHHHHHHHh-----------h--hceEEEecCCCHHHHHH
Confidence 4577774 69999999999999999 99999 99988776654310 0 1122222 3445666
Q ss_pred HHHHhccccCCCCEEEEecC
Q 024016 87 VAMQIRPLLSRKKLLVSVAA 106 (274)
Q Consensus 87 v~~~i~~~l~~~~~vis~~~ 106 (274)
+++++...+.+=..+|+..+
T Consensus 68 ~~~~~~~~~~~id~li~~Ag 87 (234)
T 2ehd_A 68 AVAAMEEAFGELSALVNNAG 87 (234)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 66666544333346777643
No 500
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.23 E-value=0.018 Score=48.46 Aligned_cols=36 Identities=14% Similarity=0.174 Sum_probs=32.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhCCCCCCCcEEEEeCCCHH
Q 024016 9 ESFILGFIGA-GKMAESIAKGVAKSGVLPPDRICTAVHSNLK 49 (274)
Q Consensus 9 ~~~~IgiIG~-G~mG~~~a~~L~~~g~~~~~~v~v~~~r~~~ 49 (274)
++++|.|.|+ |.+|+.+++.|++.|+ +|++. +|++.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~-~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGE----EVTVL-DDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC----CEEEE-CCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCC----EEEEE-ecCCc
Confidence 4679999988 9999999999999999 99999 88765
Done!